BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006018
         (664 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224127917|ref|XP_002329209.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870990|gb|EEF08121.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1470

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 297/720 (41%), Positives = 412/720 (57%), Gaps = 97/720 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRGKD R NFVSHL  ALCR++I+TFIDDKL RG EI+ +L   IE S+IS++
Sbjct: 12  KYDVFLSFRGKDTRDNFVSHLRDALCRKQIKTFIDDKLERGEEITGALLRTIEESRISVI 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           IFS  YASS WC++ELVKILE K  YGQIV+PVFY VDPSD                   
Sbjct: 72  IFSRNYASSPWCVDELVKILECKKAYGQIVLPVFYHVDPSDVDQQTGSFGNAFAELERNF 131

Query: 119 ------CPSL-----------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                  P             GW      P  ES L+E  V+ I KKL+    SD K  L
Sbjct: 132 KQKMDKVPRWRADLTSAANISGWDSQVTRP--ESSLVEQIVHHILKKLNYASSSDLKG-L 188

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S +++IE+ L +   EF  VGIWG+GG GKTTIA  I++ I+  +EG YF+ N+R 
Sbjct: 189 VGMDSRMEQIEASLCTKLPEFCFVGIWGMGGTGKTTIAGEIFNKIAREYEGHYFLANVR- 247

Query: 222 ESEKVGGL--------------ANIHLN-------FERRRLSRMKVLIVFYDLTDLKQID 260
           ESEK GGL               N+H+        F + R+ R K+LIVF D+ D+ QI+
Sbjct: 248 ESEKNGGLFRIRDELFSKITEEENLHIRTPRIGHPFIKDRICRKKILIVFDDVNDVDQIE 307

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           +L+G  + F PGSR+I+T+RD Q+LK +       +FEV+ L++ ++L LFS +AF  N 
Sbjct: 308 MLLGGCESFGPGSRIILTSRDKQVLKKY----ADKIFEVEGLNHREALHLFSLHAFKDNQ 363

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   ++ELS   I YA G PLAL+VLGS L G + +EWESA+NK++++    +  VL++S
Sbjct: 364 PPYNYMELSVRAINYAKGNPLALKVLGSSLFGRTTKEWESALNKVEKLTRQKVHSVLRIS 423

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           Y+ LD EE++IFLD ACFF+G+    V   LD C F   IG S L+ + L+ IS++K+ M
Sbjct: 424 YEALDSEEKSIFLDIACFFRGHRVDFVKRILDGCGFKTDIGFSVLIDRCLIKISDDKVEM 483

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD-------SL 491
           HDLLQEM  ++VR+ES+ + G +SRLW P+D+YQVL  N  T    GI LD        L
Sbjct: 484 HDLLQEMAHDVVRKESLDELGGQSRLWSPKDVYQVLTNNLGTGKVEGIFLDVSKIREIEL 543

Query: 492 KELYLGGCSNLKRF------PEISCNIEDLDLKETAIEE-------------LPSSIGNL 532
               LG    L+          + C +      E+  EE             LPS+    
Sbjct: 544 SSTALGRMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHWDGYPLTSLPSNF-RP 602

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-K 591
             LV+++L+ CS +  +     NL +L+ +NLS C  +  LP ++    +LE LNL    
Sbjct: 603 QNLVEINLS-CSKVNRLWRGDQNLVNLKDVNLSNCEHITFLP-DLSKARNLERLNLQFCT 660

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL---PCGSSIHARHCTSLKTLSNSSTLLT 648
              K+PSS++ L +L DL L+ C+RL +LP      C  +++   C +LK    ++  LT
Sbjct: 661 SLVKVPSSIQHLDRLVDLDLRGCERLVNLPSRINSSCLETLNLSGCANLKKCPETARKLT 720



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/196 (40%), Positives = 112/196 (57%), Gaps = 20/196 (10%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            LP+ I  L  L+ L L GC   + FPE+      +  L L+ET I +LPS IGNL  L  
Sbjct: 868  LPSSICTLRKLERLNLSGCLQFRDFPEVLEPMVCLRYLYLEETRITKLPSPIGNLKGLAC 927

Query: 538  LDLTNCSGLKSV--------SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            L++ NC  L  +        S R  +L  LR+LNL GC  +  +P+ +G L SLE L+L+
Sbjct: 928  LEVGNCKYLNDIECFVDLQLSERWVDLDYLRKLNLDGC-HISVVPDSLGCLSSLEVLDLS 986

Query: 590  EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLT 648
              +F  IP S+ +LS+L  L L+NCKRL+SLPELP   S + A +C SL  L +SS+ + 
Sbjct: 987  GNNFSTIPLSINKLSELQYLGLRNCKRLESLPELPPRLSKLDADNCESLNYLGSSSSTVV 1046

Query: 649  RSSKHWDIFN--FSNC 662
            +     +IF   F+NC
Sbjct: 1047 KG----NIFEFIFTNC 1058



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 83/140 (59%), Gaps = 1/140 (0%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           LP+ I +L  L  L L GCS++  FP++S NI++L L  TAI E+PSSI  L  LV+L L
Sbjct: 800 LPSSIGDLRKLIYLNLSGCSSITEFPKVSNNIKELYLDGTAIREIPSSIDCLFELVELHL 859

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC   + + S +C L+ L RLNLSGCL+    PE +  +  L YL L E    K+PS +
Sbjct: 860 RNCKQFEILPSSICTLRKLERLNLSGCLQFRDFPEVLEPMVCLRYLYLEETRITKLPSPI 919

Query: 601 KQLSKLSDLRLQNCKRLQSL 620
             L  L+ L + NCK L  +
Sbjct: 920 GNLKGLACLEVGNCKYLNDI 939



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 84/144 (58%), Gaps = 3/144 (2%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            +LP+ IN   L+ L L GC+NLK+ PE +  +  L+L ETA+EELP SIG LS LV L+
Sbjct: 687 VNLPSRINSSCLETLNLSGCANLKKCPETARKLTYLNLNETAVEELPQSIGELSGLVALN 746

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L NC  L ++   +  L SL  +++SGC  + +LP+   N   + YL L     E++PSS
Sbjct: 747 LKNCKLLVNLPENMYLLTSLLLVDISGCSSISRLPDFSRN---IRYLYLNGTAIEELPSS 803

Query: 600 MKQLSKLSDLRLQNCKRLQSLPEL 623
           +  L KL  L L  C  +   P++
Sbjct: 804 IGDLRKLIYLNLSGCSSITEFPKV 827


>gi|255537139|ref|XP_002509636.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223549535|gb|EEF51023.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1137

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 298/725 (41%), Positives = 408/725 (56%), Gaps = 111/725 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+S S+ +     K+DVFLSFRG+D R NF SHL AAL R+ + TF+D+  L+ G EI+
Sbjct: 1   MATSLSTSHTTHQWKYDVFLSFRGEDTRDNFTSHLFAALSRKSVITFMDNNDLHVGEEIT 60

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P++S AIE SKI+IVIFSE YA SRWCLNE+V+I+E K   GQ+V+PVFY V PSD    
Sbjct: 61  PAISKAIEESKIAIVIFSERYAFSRWCLNEIVRIIECKETCGQLVLPVFYHVGPSDVSVF 120

Query: 116 AGYCPSLG-------W---------MGIFD--IPTSESVLIEGNVNDISKKLSDLFPSDN 157
           A   PS         W         +  FD  +   ES L++  V    K+L   + SD 
Sbjct: 121 AEAFPSYDQFEKVQKWKNALSKAANLSAFDSRVTRPESKLVDEIVMYTLKQLKQSYSSDV 180

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
            + +VGV+S I++I+  L  GS +   +GIWG+GGIGKTT+A A++  I+  FEGS F+ 
Sbjct: 181 VEGIVGVDSRIEQIKELLSIGSVDVRFLGIWGMGGIGKTTLAEAVFYQIAYQFEGSCFLA 240

Query: 218 NIRDESEKVGGLA---------------------NIHLNFE-RRRLSRMKVLIVFYDLTD 255
           N+R   EK GGLA                     NI  +F  ++ L   +VLIV  D  D
Sbjct: 241 NVRGNFEKNGGLARLQEELLSKTLEKRDFKIDTPNIGYSFWVKQMLKHRRVLIVVDDAND 300

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
            +Q+DLL+G  D F PGSR+I+T+RD Q+L       V  ++EVKEL ++++L LF++  
Sbjct: 301 SEQLDLLVGSHDWFGPGSRIIVTSRDKQVLTK----IVDDIYEVKELVHHEALQLFNQTT 356

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F +      +  LS++VI+YA GVPLAL+VLGS+L G S+ EWESA++KLK+ PH   Q 
Sbjct: 357 FKKKCVPEDYSYLSDLVIEYAKGVPLALKVLGSFLFGKSKTEWESALDKLKKAPHRATQN 416

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           VLK+SYDGLD EE+NIFLD ACFF+G    +V   LD C FS KIG+  LV KSL+TI N
Sbjct: 417 VLKISYDGLDAEEKNIFLDIACFFRGESVEMVTKILDGCGFSTKIGLCLLVDKSLITILN 476

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE------------NTSLP 483
           +K+ MHDLLQEMG EIV QES K P +R+RLW+ EDI  V +             NTS+ 
Sbjct: 477 DKVEMHDLLQEMGKEIVLQES-KQPSQRTRLWNHEDILHVFSRNLGTETIEGMCLNTSMI 535

Query: 484 TGINLDS-------------LKELYLGG----CSNLKRFPE----ISCNIEDLDLKETAI 522
             I L+S               + Y+ G    C+ + R P+    +S  +  L      +
Sbjct: 536 NKIELNSNAFGRMYNLRFLKFYQSYIHGGFKECTKI-RLPQGLDSLSNELRYLHWHGYPL 594

Query: 523 EELPSSI----------------------GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
           + LP+ I                       +L +L  +DL+    L  + + L    +L 
Sbjct: 595 KSLPARIHLMNLVVLVLPYSKVKRLWKGCKDLKKLKVIDLSYSQALIRI-TELTTASNLS 653

Query: 561 RLNLSGCLKLEKLPEEI--GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
            + LSGC  L  +P      +L +LE +N   K  E +PSS+ +L  L  L L  C  LQ
Sbjct: 654 YMKLSGCKNLRSMPSTTRWKSLSTLE-MNYCTK-LESLPSSICKLKSLESLSLCGCSNLQ 711

Query: 619 SLPEL 623
           S PE+
Sbjct: 712 SFPEI 716



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 107/200 (53%), Gaps = 27/200 (13%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SL+ L L GCSNL+ FPEI  +++ L    L  TAI+ELPSSI  L  L 
Sbjct: 688 SLPSSICKLKSLESLSLCGCSNLQSFPEILESMDRLKVLVLNGTAIKELPSSIERLKGLS 747

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            + L NC  L  +    CNLK+L  L L+ C KLEKLPE++ NL +LE L++   +  K+
Sbjct: 748 SIYLENCRNLAHLPESFCNLKALYWLFLTFCPKLEKLPEKLSNLTTLEDLSVGVCNLLKL 807

Query: 597 PSSMKQLSKLSDLRL----------------------QNCKRLQSLPELPCG-SSIHARH 633
           PS M  LS +S L L                       +C+RL+SLPE+P   + I A  
Sbjct: 808 PSHMNHLSCISKLDLSGNYFDQLPSFKYLLNLRCLDISSCRRLRSLPEVPHSLTDIDAHD 867

Query: 634 CTSLKTLSNSSTLLTRSSKH 653
           C SL+T+S    +      H
Sbjct: 868 CRSLETISGLKQIFQLKYTH 887



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 24/152 (15%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           Q L   T L T  NL  +K   L GC NL+  P                     S     
Sbjct: 638 QALIRITELTTASNLSYMK---LSGCKNLRSMP---------------------STTRWK 673

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
            L  L++  C+ L+S+ S +C LKSL  L+L GC  L+  PE + +++ L+ L L     
Sbjct: 674 SLSTLEMNYCTKLESLPSSICKLKSLESLSLCGCSNLQSFPEILESMDRLKVLVLNGTAI 733

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           +++PSS+++L  LS + L+NC+ L  LPE  C
Sbjct: 734 KELPSSIERLKGLSSIYLENCRNLAHLPESFC 765


>gi|359496034|ref|XP_002277500.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1132

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 300/728 (41%), Positives = 395/728 (54%), Gaps = 130/728 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R+NF +HL  AL  + I  FID DKL  G  ISP+L SAIEGS+ SI
Sbjct: 9   KYDVFLSFRGEDTRNNFTAHLYDALHCKGINAFIDADKLRIGEIISPALLSAIEGSRFSI 68

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
           V+ SE YASSRWCL ELVKILE K   GQ+V+P+FY VDPSD       Y  +       
Sbjct: 69  VVLSENYASSRWCLEELVKILECKKTKGQVVLPIFYQVDPSDVRKQKGSYGKAFAKHEEN 128

Query: 124 ----------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W           G       ESVLI+  V+ +  +L     SD +DQLVG
Sbjct: 129 MKENMEKVHIWREALSEVGNISGRDSRNKDESVLIKEIVSMLLNELLSTPSSDAEDQLVG 188

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           + S I+E+E  L + ST+   VGIWG+GGIGKTT+A AIY+ +SS FEG  ++++  ++ 
Sbjct: 189 IGSQIREMELLLCTESTDVRMVGIWGMGGIGKTTLAQAIYNQVSSQFEGCSYLEDAGEDL 248

Query: 224 EKVG-------------GLANIHLNFE---RRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
            K G             G  NI LN     + RL   +V IV  ++ D   ++ L+G  D
Sbjct: 249 RKRGLIGLQEKLLSQILGHENIKLNGPISLKARLCSREVFIVLDNVYDQDILECLVGSHD 308

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F  GSR+IITTRD +LL +H G RV  V+EVK+L + +++    R A  Q      F+E
Sbjct: 309 WFGQGSRIIITTRDKRLLMSH-GVRV--VYEVKKLVHTEAIEFLGRYASKQQIVIDEFME 365

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LSN +I YA G+PL L+VLGS+L  MS+ EW S ++KLK  PH  IQ+VL++SYDGLDD+
Sbjct: 366 LSNSIITYAQGLPLVLKVLGSFLFSMSKHEWRSELDKLKDTPHGRIQEVLRISYDGLDDK 425

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQE 446
           E+NIFLD ACFFKG D+  V+  LD C F A  GI  L+ KSL+TISNN KI MHDLLQE
Sbjct: 426 EKNIFLDIACFFKGEDKDHVIKILDGCGFFAVCGIRGLIDKSLITISNNDKIVMHDLLQE 485

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGI--NLDSLKELY-----LG 497
           MG +I+RQ S K+PGKRSRLW  +D Y VL++NT      GI  NL  ++E++       
Sbjct: 486 MGRKIIRQTSPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFFNLSDIEEIHFTTKAFA 545

Query: 498 GCSNLK--RFPEIS------C---------------NIEDLDLKETAIEELPSSIGNLSR 534
           G   L+  +F + S      C               N+ DL L  + +++L   I  L +
Sbjct: 546 GMDKLRLLKFYDYSPSTNSECTSKRKCKLPHDFSPKNLVDLSLSCSDVKQLWKGIKVLDK 605

Query: 535 LVDLDLT-----------------------------------------------NCSGLK 547
           L  +DL+                                               +C  LK
Sbjct: 606 LKFMDLSHSKYLVETPNFSGISNLEKLDLTGCTYLREVHPTLGVLGKLSFLSLRDCKMLK 665

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           ++ + +C LKSL     SGC K+E  PE  GNLE L+ L   E     +PSS+  L  L 
Sbjct: 666 NIPNSICKLKSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQ 725

Query: 608 DLRLQNCK 615
            L    CK
Sbjct: 726 VLSFNGCK 733



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 23/187 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           ++P  I  L SL+     GCS ++ FPE   N+E L      ETAI  LPSSI +L  L 
Sbjct: 666 NIPNSICKLKSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQ 725

Query: 537 DLDLTNCSGLKSVS-----------------SRLCNLKSLRRLNLSGCLKLEKLP-EEIG 578
            L    C G  S S                 S L  L SL+ LNL  C   E      + 
Sbjct: 726 VLSFNGCKGPPSASWLTLLPRKSSNSGKFLLSPLSGLGSLKELNLRDCNISEGADLSHLA 785

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSL 637
            L SLEYL+L+  +F  +PSSM QLS+L  L+LQNC+RLQ+L ELP     I A +C SL
Sbjct: 786 ILSSLEYLDLSGNNFISLPSSMSQLSQLVSLKLQNCRRLQALSELPSSIKEIDAHNCMSL 845

Query: 638 KTLSNSS 644
           +T+SN S
Sbjct: 846 ETISNRS 852



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 26/118 (22%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS-----CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           L SLKEL L  C N+    ++S      ++E LDL       LPSS+  LS+LV L L N
Sbjct: 762 LGSLKELNLRDC-NISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQLVSLKLQN 820

Query: 543 CSGLKSVSSRLCNLK--------------------SLRRLNLSGCLKLEKLPEEIGNL 580
           C  L+++S    ++K                    SLR ++   CLK++     IG++
Sbjct: 821 CRRLQALSELPSSIKEIDAHNCMSLETISNRSLFPSLRHVSFGECLKIKTYQNNIGSM 878


>gi|255564976|ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537309|gb|EEF38940.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 944

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 285/696 (40%), Positives = 398/696 (57%), Gaps = 97/696 (13%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P  K+DVF+SFRG+D R NF SHL AAL +++I+ F+DDKL+RG EIS +L   IE S +
Sbjct: 12  PQLKYDVFVSFRGEDTRDNFTSHLYAALHQKQIKAFVDDKLSRGEEISAALVKVIEESMV 71

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL---- 122
           S++IFSE YA S WCL+ELVKILE K   GQIV+PVFY VDPSD      G+  +     
Sbjct: 72  SVIIFSENYAFSPWCLDELVKILECKKTVGQIVLPVFYHVDPSDVAEQKGGFGAAFIEHE 131

Query: 123 ------------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                                   GW     +  SES LI+    DI KKL+ +  S + 
Sbjct: 132 KCFKERIDKLQKWRAALTEAANISGWSS--SVIRSESKLIQEIAEDILKKLNHMSSSTDS 189

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             LVG+ S I +IE  L     +   +G+WG+GG GKTT A  +++ IS+ F+   F+ N
Sbjct: 190 KGLVGINSRIDKIELLLCVELADVRFLGLWGMGGAGKTTTAEVVFNRISTQFDSCCFLAN 249

Query: 219 IRDESEKVG-------------GLANIHLN---FERRRLSRMKVLIVFYDLTDLKQIDLL 262
           + +ESE+ G             G  N++     F++ RL   KVLIV  D+ +L+Q++ L
Sbjct: 250 VNEESERYGLLKLQRQLFSKLLGQDNVNYAEGIFDKSRLKHRKVLIVLDDVNNLRQLENL 309

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G  + F PGSR+I+T+RD  +LKN    +   ++++++L ++++L LFS NAF Q  P 
Sbjct: 310 AGEHNWFGPGSRIILTSRDKDVLKN----KTDAIYKIEDLDHHEALQLFSLNAFRQECPK 365

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
           A +++LS  VI YA G PL L+VLGS+L   + +EWESA++KL+R  + +IQ VLKVSYD
Sbjct: 366 ADYMKLSKRVINYAKGNPLGLKVLGSFLYQRNIKEWESALHKLERSTNKEIQNVLKVSYD 425

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
           GLDDEE++IFLD ACFF G D+  V   L+ C FSA I IS LV KSL+TISNN + +H+
Sbjct: 426 GLDDEEKDIFLDVACFFNGEDRDFVTRILNGCGFSADIAISVLVSKSLLTISNNTLAIHN 485

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLK--ELYLGG 498
           LLQ+MG  IVRQES K+PG+RSRL   ED+  VL++NT      GI LD  K  ++YL  
Sbjct: 486 LLQQMGWGIVRQESTKEPGRRSRLCTSEDVVHVLSKNTGTEAIEGIYLDMSKSRKVYLSP 545

Query: 499 CSNLKRFPEISCNIEDLDLKET--------------AIEELPSSIGNL------------ 532
               K F  +  N+  L    +               +E LP  +  L            
Sbjct: 546 ----KAFERMH-NLRLLKFHHSFSPIAMYSKVYLPEGLESLPDKLSCLHWNGYPLKSLPF 600

Query: 533 ----SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
                 LV+L + + S +K +      LK L  +NLS    L +LP +     +LEY+NL
Sbjct: 601 NFCAEYLVELSMPH-SHVKFLWEGDQCLKKLNSINLSDSQHLIRLP-DFSEALNLEYINL 658

Query: 589 -AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                  ++PSS+  L+KL  L L++CK L+S+P L
Sbjct: 659 EGCISLAQVPSSIGYLTKLDILNLKDCKELRSIPSL 694



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 7/133 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  L  + L    +L R P+ S   N+E ++L+   ++ ++PSSIG L++L  L+L +C 
Sbjct: 627 LKKLNSINLSDSQHLIRLPDFSEALNLEYINLEGCISLAQVPSSIGYLTKLDILNLKDCK 686

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S+ S L +L+SLR+LNLSGC  L    +   N+E    L L     E++P+S++ LS
Sbjct: 687 ELRSIPS-LIDLQSLRKLNLSGCSNLNHCQDFPRNIEE---LCLDGTAIEELPASIEDLS 742

Query: 605 KLSDLRLQNCKRL 617
           +L+   ++NCKRL
Sbjct: 743 ELTFWSMENCKRL 755



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 44/69 (63%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           E  S+P+ I+L SL++L L GCSNL    +   NIE+L L  TAIEELP+SI +LS L  
Sbjct: 687 ELRSIPSLIDLQSLRKLNLSGCSNLNHCQDFPRNIEELCLDGTAIEELPASIEDLSELTF 746

Query: 538 LDLTNCSGL 546
             + NC  L
Sbjct: 747 WSMENCKRL 755


>gi|255573549|ref|XP_002527699.1| ATP binding protein, putative [Ricinus communis]
 gi|223532930|gb|EEF34698.1| ATP binding protein, putative [Ricinus communis]
          Length = 908

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 296/723 (40%), Positives = 416/723 (57%), Gaps = 95/723 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG D R++FVSHL AALCRE+I TF+D  L R  EI+ ++  +IE S+ SIV
Sbjct: 14  KYDVFLSFRGTDTRNSFVSHLYAALCRERISTFLDIGLKRQEEITATMHKSIEASRTSIV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           IFS+ Y +S WCL+ELVKILE +   GQIV+PVFY VDP +                   
Sbjct: 74  IFSKNYGASPWCLDELVKILECRKTMGQIVLPVFYEVDPREVRKQSGAFGEAFSRHVIDF 133

Query: 116 -----------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                      A      GW  +      ES++I   VN I K+L  L  S N D L+G+
Sbjct: 134 TDKVSRWRTALAEAANYSGW--VLGDTRPESLVINDIVNYILKRLHQL--SSNLDGLIGM 189

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S +K++E+ L  GS +  TVGIWG+GGIGKTTIA  I++ +S  FE   F+ NIR++  
Sbjct: 190 DSHVKQLETLLCLGSFDNRTVGIWGMGGIGKTTIARVIFNKMSGSFENRCFLGNIREKIG 249

Query: 225 KVGGL--------------------ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           K G L                     ++  +F  +RL   KVL+V  D+ +L  +  L G
Sbjct: 250 KTGLLNLQREFLCEISGGENISADTVDVMSSFIIKRLRNKKVLVVLDDVDNLMDLSSLTG 309

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
            L+ F PGSR+I+T+RD Q+L+      V  ++EVK L+ ++SL LFS  AF Q+ P   
Sbjct: 310 GLNLFGPGSRIIVTSRDKQVLQY---CGVDSIYEVKGLNNHESLQLFSHYAFEQSLPTEA 366

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +  LSN V++YA G+PLAL++ GS+L   S E+WES +++L+   + ++Q+VL++SY GL
Sbjct: 367 YWNLSNRVLQYAKGLPLALKICGSHLCTRSIEQWESILHRLESPLNSEVQEVLQISYYGL 426

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD +++IFLD ACFF+G     V   L    F A IGI+RL+GKSL++IS+ ++ MH+L+
Sbjct: 427 DDLDKDIFLDIACFFRGQGIDHVKEILYDSGFYADIGIARLIGKSLISISDKRLEMHNLV 486

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKELY------- 495
           QEMG EIVRQESI +PG RSRLW+ E+IY VL  N+ T    GINLD L +++       
Sbjct: 487 QEMGWEIVRQESIYEPGSRSRLWNHEEIYHVLTSNKGTGAVRGINLD-LSKIHKLCLSSD 545

Query: 496 ----LGGCSNLKRFPEISCNIEDLDLKETAIE---ELPSSIGNLSRLVDLDLTNCSGLKS 548
               +G    LK +   S   ED D K  A+E    LP+S+    RL+  D    + L S
Sbjct: 546 SFTRMGNLKFLKFYTPFSKYWED-DSKLYALEGLAYLPASL----RLLHWDRYPLNSLPS 600

Query: 549 VSSRLCNLKSLRRLNLSGCL-KLEKLPE-------EIGNLESLEYLNLAEKDFEKIPSSM 600
                 N +  + + L  C  KLE L E           L SLE+L+L   +F  IP  +
Sbjct: 601 ------NFEPRQLVELILCHSKLELLWEGAKLLESSFSRLSSLEHLDLRGNNFSNIPGDI 654

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
           +QL  L  L + +C  L+SLPELP     ++A  CTSL+++S  S+  T S  +  +F F
Sbjct: 655 RQLFHLKLLDISSCSNLRSLPELPSHIEYVNAHDCTSLESVSIPSS-FTVSEWNRPMFLF 713

Query: 660 SNC 662
           +NC
Sbjct: 714 TNC 716


>gi|255569048|ref|XP_002525493.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223535172|gb|EEF36851.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1084

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 293/682 (42%), Positives = 392/682 (57%), Gaps = 80/682 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSS+S    P  K DVFLSFRGKD R NF SHL  ALCR+KI+TFID+ L RG EI+P
Sbjct: 1   MASSSNS----PKRKFDVFLSFRGKDTRDNFTSHLYDALCRKKIKTFIDNGLERGEEITP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
           +L   IE S IS+++FSE YASS WCL+E+VKILE +  +GQ V+PVFY VDPSD     
Sbjct: 57  ALLRTIEESLISVIVFSENYASSPWCLDEMVKILECRETHGQAVLPVFYHVDPSDVEEQN 116

Query: 116 AGYCPSL-------------------------GWMGIFDIPTSESVLIEGNVNDISKKLS 150
             +  +L                         GW        SE+ L++  V  I +KL+
Sbjct: 117 GSFALTLVELEKNFKDKVSKWRTDLMKAASISGWDS--RAIGSEAKLVKHIVEHILQKLN 174

Query: 151 DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
               +D K  L+G++S I++I+  L  G  +  TVG+WG+ GIGKTTIA AI++ +SS F
Sbjct: 175 KASSTDLKG-LIGLDSHIRKIKKLLQIGLPDIRTVGLWGMSGIGKTTIAGAIFNTLSSQF 233

Query: 211 EGSYFMQNIRDESEKVGGL-------------ANIHLNFE-------RRRLSRMKVLIVF 250
           EG  F++NI++ESE+ G +              N+H+          + RL   KVL+V 
Sbjct: 234 EGCCFLENIKEESERCGLVPLRDKLLSEILMEGNVHIATPSIGSTSLKNRLRHKKVLLVL 293

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+ D+ QI+ LIGR D F  GSRV++T+RD Q+LKN     V  ++EV+ LS +++L L
Sbjct: 294 DDVNDVDQIETLIGRCD-FGLGSRVLVTSRDKQVLKN----VVDEIYEVEGLSDDEALQL 348

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
           F+ +AF  N      ++LS  V+K+A G PLAL+VLGS L   S+++WESA+ KL+R P 
Sbjct: 349 FNLHAFKDNCSTTDKIKLSYRVVKHAQGNPLALKVLGSSLFARSKQDWESALEKLERTPQ 408

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
             I  VL+ S+D LDDEE++IFLD ACFFKG     V   L+ C  SA IGIS L GK L
Sbjct: 409 PKIFHVLRSSFDALDDEEKSIFLDIACFFKGQQIGFVKKILNGCGLSAGIGISVLAGKCL 468

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINL 488
           V+I  NK+ MHDLLQEM  EIV QESIK+ GKRSRLW P D  QVL +N  T    GI  
Sbjct: 469 VSIQENKLEMHDLLQEMAQEIVHQESIKELGKRSRLWSPSDACQVLTKNLGTERVEGIFF 528

Query: 489 DSLKELYLGGCSNL--KRFPEI---SCNI---EDLDLKETAIEELPSSIGNLSRL-VDLD 539
           D+    Y  G  +L  + F  I   +C +   + LD     +  L      LS +  +  
Sbjct: 529 DT----YKMGAVDLSSRAFVRIVGNNCKVNLPQGLDFLSDELRYLHGDGYPLSYMPSNFQ 584

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
             N   L    S +  L +  +L LSGC  + + P    +++    L L     E+IPSS
Sbjct: 585 AENLVQLTLAYSSIKQLWTGVQLILSGCSSITEFPHVSWDIKK---LFLDGTAIEEIPSS 641

Query: 600 MKQLSKLSDLRLQNCKRLQSLP 621
           +K   +L +L LQNCKR   LP
Sbjct: 642 IKYFPELVELSLQNCKRFLRLP 663



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 76/139 (54%)

Query: 493 ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
           +L L GCS++  FP +S +I+ L L  TAIEE+PSSI     LV+L L NC     +   
Sbjct: 606 QLILSGCSSITEFPHVSWDIKKLFLDGTAIEEIPSSIKYFPELVELSLQNCKRFLRLPRT 665

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           +   K L++LNLSGC      PE +  + SL+YL L       +PS M+ L  L  L L+
Sbjct: 666 IWKFKLLQKLNLSGCSTFVSFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELR 725

Query: 613 NCKRLQSLPELPCGSSIHA 631
           +CK L  L E+  G  + +
Sbjct: 726 SCKNLYGLQEVISGRVVKS 744



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 105/187 (56%), Gaps = 19/187 (10%)

Query: 491 LKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL- 546
           L++L L GCS    FPEI     +++ L L  T I  LPS + NL  L+ L+L +C  L 
Sbjct: 672 LQKLNLSGCSTFVSFPEILEVMGSLKYLYLDGTGISNLPSPMRNLPGLLSLELRSCKNLY 731

Query: 547 ---KSVSSRLCN-------LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
              + +S R+         ++ LR+LNLSGC  LE +P  I  L SLE L+L+   FE+I
Sbjct: 732 GLQEVISGRVVKSPATVGGIQYLRKLNLSGCCLLE-VPYCIDCLPSLESLDLSRNLFEEI 790

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWD 655
           P S+ +L +L  L L++CK+L SLP+LP   + + A  C SLK+ S   T +  ++    
Sbjct: 791 PVSINKLFELQYLGLRDCKKLISLPDLPPRLTKLDAHKCCSLKSASLDPTGIEGNNFE-- 848

Query: 656 IFNFSNC 662
            F F+NC
Sbjct: 849 -FFFTNC 854


>gi|296090597|emb|CBI40966.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 293/716 (40%), Positives = 397/716 (55%), Gaps = 113/716 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R+NF +HL  AL  + I  FID DKL  G  ISP+L SAIEGS+ SI
Sbjct: 9   KYDVFLSFRGEDTRNNFTAHLYDALHCKGINAFIDADKLRIGEIISPALLSAIEGSRFSI 68

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
           V+ SE YASSRWCL ELVKILE K   GQ+V+P+FY VDPSD       Y  +       
Sbjct: 69  VVLSENYASSRWCLEELVKILECKKTKGQVVLPIFYQVDPSDVRKQKGSYGKAFAKHEEN 128

Query: 124 ----------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W           G       ESVLI+  V+ +  +L     SD +DQLVG
Sbjct: 129 MKENMEKVHIWREALSEVGNISGRDSRNKDESVLIKEIVSMLLNELLSTPSSDAEDQLVG 188

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           + S I+E+E  L + ST+   VGIWG+GGIGKTT+A AIY+ +SS FEG  ++++  ++ 
Sbjct: 189 IGSQIREMELLLCTESTDVRMVGIWGMGGIGKTTLAQAIYNQVSSQFEGCSYLEDAGEDL 248

Query: 224 EKVG-------------GLANIHLNFE---RRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
            K G             G  NI LN     + RL   +V IV  ++ D   ++ L+G  D
Sbjct: 249 RKRGLIGLQEKLLSQILGHENIKLNGPISLKARLCSREVFIVLDNVYDQDILECLVGSHD 308

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F  GSR+IITTRD +LL +H G RV  V+EVK+L + +++    R A  Q      F+E
Sbjct: 309 WFGQGSRIIITTRDKRLLMSH-GVRV--VYEVKKLVHTEAIEFLGRYASKQQIVIDEFME 365

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LSN +I YA G+PL L+VLGS+L  MS+ EW S ++KLK  PH  IQ+VL++SYDGLDD+
Sbjct: 366 LSNSIITYAQGLPLVLKVLGSFLFSMSKHEWRSELDKLKDTPHGRIQEVLRISYDGLDDK 425

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQE 446
           E+NIFLD ACFFKG D+  V+  LD C F A  GI  L+ KSL+TISNN KI MHDLLQE
Sbjct: 426 EKNIFLDIACFFKGEDKDHVIKILDGCGFFAVCGIRGLIDKSLITISNNDKIVMHDLLQE 485

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGI--NLDSLKELY-----LG 497
           MG +I+RQ S K+PGKRSRLW  +D Y VL++NT      GI  NL  ++E++       
Sbjct: 486 MGRKIIRQTSPKEPGKRSRLWIYKDAYHVLSKNTGTQEVEGIFFNLSDIEEIHFTTKAFA 545

Query: 498 GCSNLK--RFPEIS------------CNIE-------------DLDLKETAIEELPSSIG 530
           G   L+  +F + S            C +               L L    +E+LP    
Sbjct: 546 GMDKLRLLKFYDYSPSTNSECTSKRKCKVHIPRDFKFHYNELRYLHLHGYPLEQLPHDFS 605

Query: 531 NLSRLVDLDLTNCSGLKSV-----------------------SSRLCNLKSLRRLNLSGC 567
               LVDL L+ CS +K +                       +     + +L +L+L+GC
Sbjct: 606 P-KNLVDLSLS-CSDVKQLWKGIKVLDKLKFMDLSHSKYLVETPNFSGISNLEKLDLTGC 663

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
             L ++   +G L  L +L+L + K  + IP+S+ +L  L       C ++++ PE
Sbjct: 664 TYLREVHPTLGVLGKLSFLSLRDCKMLKNIPNSICKLKSLETFIFSGCSKVENFPE 719



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 97/187 (51%), Gaps = 23/187 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           ++P  I  L SL+     GCS ++ FPE   N+E L      ETAI  LPSSI +L  L 
Sbjct: 692 NIPNSICKLKSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLRILQ 751

Query: 537 DLDLTNCSGLKSVS-----------------SRLCNLKSLRRLNLSGCLKLEKLP-EEIG 578
            L    C G  S S                 S L  L SL+ LNL  C   E      + 
Sbjct: 752 VLSFNGCKGPPSASWLTLLPRKSSNSGKFLLSPLSGLGSLKELNLRDCNISEGADLSHLA 811

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSL 637
            L SLEYL+L+  +F  +PSSM QLS+L  L+LQNC+RLQ+L ELP     I A +C SL
Sbjct: 812 ILSSLEYLDLSGNNFISLPSSMSQLSQLVSLKLQNCRRLQALSELPSSIKEIDAHNCMSL 871

Query: 638 KTLSNSS 644
           +T+SN S
Sbjct: 872 ETISNRS 878



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 66/131 (50%), Gaps = 3/131 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           LD LK + L     L   P  S   N+E LDL   T + E+  ++G L +L  L L +C 
Sbjct: 629 LDKLKFMDLSHSKYLVETPNFSGISNLEKLDLTGCTYLREVHPTLGVLGKLSFLSLRDCK 688

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK++ + +C LKSL     SGC K+E  PE  GNLE L+ L   E     +PSS+  L 
Sbjct: 689 MLKNIPNSICKLKSLETFIFSGCSKVENFPENFGNLEQLKELYADETAISALPSSICHLR 748

Query: 605 KLSDLRLQNCK 615
            L  L    CK
Sbjct: 749 ILQVLSFNGCK 759



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 26/118 (22%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS-----CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           L SLKEL L  C N+    ++S      ++E LDL       LPSS+  LS+LV L L N
Sbjct: 788 LGSLKELNLRDC-NISEGADLSHLAILSSLEYLDLSGNNFISLPSSMSQLSQLVSLKLQN 846

Query: 543 CSGLKSVSSRLCNLK--------------------SLRRLNLSGCLKLEKLPEEIGNL 580
           C  L+++S    ++K                    SLR ++   CLK++     IG++
Sbjct: 847 CRRLQALSELPSSIKEIDAHNCMSLETISNRSLFPSLRHVSFGECLKIKTYQNNIGSM 904


>gi|356577113|ref|XP_003556672.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1344

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 277/726 (38%), Positives = 403/726 (55%), Gaps = 120/726 (16%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P  ++DVF+SFRG+D R+NF SHL AA    KI+ FID++L++G+EISPS+  AI+   +
Sbjct: 40  PLKRYDVFISFRGEDTRNNFTSHLYAAFQLNKIQAFIDNRLHKGDEISPSIFKAIKHCNL 99

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------- 114
           S+V+ S+ YASS WCL EL +IL+ K + G IV+PVFY +DPS                 
Sbjct: 100 SVVVLSKHYASSTWCLRELAEILDHKKRGGHIVIPVFYKIDPSHVRKQTGTYGKAFEKYE 159

Query: 115 -DAGYCPSL---------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
            D  +  ++               GW   F    +E+ LIEG V D+ +KL+ ++P++ K
Sbjct: 160 RDVKHNMAMLQKWKAALTEVANLVGWE--FKNHRTENELIEGIVKDVMEKLNRIYPTEVK 217

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           + LVG++  I  IES L  GS E   +GIWG+GG+GKTTIA+A+++ +SS +EGS F+ N
Sbjct: 218 ETLVGIDQNIAPIESLLRIGSKEVRIIGIWGMGGVGKTTIANALFTKLSSQYEGSCFLAN 277

Query: 219 IRDESEKVG--------------GLANIHLN-------FERRRLSRMKVLIVFYDLTDLK 257
           +R+E E  G                 N+H++       F  RRL + KVLIV  D+ D K
Sbjct: 278 VREEYENQGLGYLRNKLFSEVLEDDVNLHISTPKVRSTFVMRRLRQKKVLIVLDDVDDSK 337

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           +++ L  + D    GS VI+TTRD  ++       V   +EVK LS + ++ LFS NAFG
Sbjct: 338 KLEYLAAQHDCLGSGSIVIVTTRDKHVI----SKGVDETYEVKGLSLHHAVRLFSLNAFG 393

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           + +P  GF  LS  V+ +ANG PLAL+VLGS L   +E++W +A+ KL ++P+ +IQ VL
Sbjct: 394 KTYPEKGFEMLSKQVVDHANGNPLALKVLGSLLHSRNEQQWANALRKLTKVPNAEIQNVL 453

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN- 436
           + SYDGLD E++N+FLD ACFF+G +   V+  L+ C F   IGI  L  KSLVT S++ 
Sbjct: 454 RWSYDGLDYEQKNMFLDIACFFRGENIENVIRLLEICGFYPYIGIKILQEKSLVTFSDDG 513

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKEL 494
           K+ MHDL+QEMG EIV +ESIKDPG+RSRLW P+++Y VL  N  T    GI LD     
Sbjct: 514 KVCMHDLIQEMGWEIVHRESIKDPGRRSRLWDPKEVYDVLKNNRGTDAVEGIILDV---- 569

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL-------------DLT 541
                                    + I +LP S    SR++++             +L 
Sbjct: 570 -------------------------SQISDLPLSYETFSRMINIRFLKFYMGRGRTCNLL 604

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
             SGLKS+ ++L  L+             + LP      ++L  L++ E   EK+   +K
Sbjct: 605 LPSGLKSLPNKLMYLQ-------WDGYPSKSLPSTFCT-DNLVVLSMMESHVEKLWDGIK 656

Query: 602 QLSKLSDLRLQNCKRLQSLPEL---PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFN 658
             + L ++ L+  K+L +LP+L   P   +I   HCTSL  +     L  +  K   +FN
Sbjct: 657 SFASLKEINLRASKKLTNLPDLSLAPNLETIDVSHCTSLLHVP----LSIQYVKKLLLFN 712

Query: 659 FSNCSN 664
             +C N
Sbjct: 713 LESCKN 718



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 5/145 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG-NLSRLVDLD 539
           SLP  I+L SL+   L  CS+L  F   S N+ +LDL+ETAI++ P  +  +L++LV L+
Sbjct: 721 SLPINIHLSSLEMFILRRCSSLDEFSVTSQNMTNLDLRETAIKDFPEYLWEHLNKLVYLN 780

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L +CS LKS++S++ +LKSL++L+L  C  LE+        E++  LNL     +++P+S
Sbjct: 781 LESCSMLKSLTSKI-HLKSLQKLSLRDCSSLEEFS---VTSENMGCLNLRGTSIKELPTS 836

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELP 624
           + + +KL  L L +CK+L + P+ P
Sbjct: 837 LWRNNKLFTLVLHSCKKLVNFPDRP 861



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 83/165 (50%), Gaps = 24/165 (14%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            +LP  I +L SLK+L L  C  L+  P +  ++EDL L E+ IE L  SI +LS L  L 
Sbjct: 902  NLPVSIKDLPSLKKLTLTECKKLRSLPSLPPSLEDLSLDESDIECLSLSIKDLSHLKILT 961

Query: 540  LTNCSGLKS-----------------VSSRLCNLKSLRRLNLSGCLKLEK---LPEEIGN 579
            LTN   L S                 V S L ++K L  L     +K ++   LPE    
Sbjct: 962  LTNYKKLMSPQDLPSSSKASLLNESKVDSHLVSMKGLSHLQKFPLVKWKRFHSLPELPPF 1021

Query: 580  LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            LE    L+L+E + E IP S+K LS L  L ++ C  L+ LPELP
Sbjct: 1022 LEE---LSLSESNIECIPKSIKNLSHLRKLAIKKCTGLRYLPELP 1063



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 48/205 (23%)

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-----------SLPTGINLDSLKE 493
           Q M    +R+ +IKD         PE +++ LN+             SL + I+L SL++
Sbjct: 750 QNMTNLDLRETAIKD--------FPEYLWEHLNKLVYLNLESCSMLKSLTSKIHLKSLQK 801

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRL 553
           L L  CS+L+ F   S N+  L+L+ T+I+ELP+S+   ++L  L L +C  L +   R 
Sbjct: 802 LSLRDCSSLEEFSVTSENMGCLNLRGTSIKELPTSLWRNNKLFTLVLHSCKKLVNFPDR- 860

Query: 554 CNLKSLRRLNLSGCLKLEKLP--------------EEIGNLESLEYLNLAEKDFEKIPSS 599
                          KLE LP              +E   L SL  L+L     E +P S
Sbjct: 861 --------------PKLEDLPLIFNGVSSSESPNTDEPWTLSSLADLSLKGSSIENLPVS 906

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELP 624
           +K L  L  L L  CK+L+SLP LP
Sbjct: 907 IKDLPSLKKLTLTECKKLRSLPSLP 931



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 36/192 (18%)

Query: 465  RLWHPEDI-----YQVLNENTSLPTGINLDSLKELYLGGCSNLKRF---PEISCNIEDLD 516
            +L  P+D+       +LNE+      +++  L  L        KRF   PE+   +E+L 
Sbjct: 967  KLMSPQDLPSSSKASLLNESKVDSHLVSMKGLSHLQKFPLVKWKRFHSLPELPPFLEELS 1026

Query: 517  LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
            L E+ IE +P SI NLS L  L +  C+GL+ +      LK L    + GC         
Sbjct: 1027 LSESNIECIPKSIKNLSHLRKLAIKKCTGLRYLPELPPYLKDLF---VRGC--------- 1074

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL-PCGSSIHARHCT 635
                           D E +P S+K L  L  + L  CK+LQ LPEL PC  S  A  C 
Sbjct: 1075 ---------------DIESLPISIKDLVHLRKITLIECKKLQVLPELPPCLQSFCAADCR 1119

Query: 636  SLKTLSNSSTLL 647
            SL+ + +S T+L
Sbjct: 1120 SLEIVRSSKTVL 1131


>gi|74231152|gb|ABA00702.1| disease resistance protein [Phaseolus vulgaris]
          Length = 753

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 285/697 (40%), Positives = 403/697 (57%), Gaps = 99/697 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVFLSFRG+D R NF+SHL AAL R+ IE +ID +L RG EISP+L SAIE SKI ++
Sbjct: 16  KHDVFLSFRGEDTRDNFISHLYAALQRKNIEAYIDYRLLRGEEISPALHSAIEESKIYVL 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL------- 122
           +FSE YASS WCLNEL KIL+ K ++G+ V+PVFY VDPS     +  Y  +        
Sbjct: 76  VFSENYASSTWCLNELTKILDCKKRFGRDVIPVFYKVDPSTIRKQEHRYKEAFDEHEQRF 135

Query: 123 --------GWMGIFDIPTSESVL--IEGNVNDISKKLSDLFPSDNKDQ-LVGVESIIKEI 171
                   GW    D  T  + L  +E  V DI +KL+    S + DQ ++G+E  I  I
Sbjct: 136 KHDMDKVQGWK---DALTEAAGLSGVEKIVEDILRKLNRY--STSYDQGIIGIEKNIGGI 190

Query: 172 ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--GL 229
           +S L   S +   +GI G+GGIGKTTI   IY  ++  F+ S  + +++D+ ++ G   +
Sbjct: 191 QSLLHLESPDVRIIGICGMGGIGKTTICDQIYQKLALQFDSSSLVLDVQDKIQRDGIDSI 250

Query: 230 ANIHLN------------FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVII 277
              +L+            +   RL R KVL++  D+TD  Q+  LI   D F  GSR+I+
Sbjct: 251 RTKYLSELLKEEKSSSSPYYNERLKRTKVLLILDDVTDSAQLQKLIRGSDSFGQGSRIIM 310

Query: 278 TTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA-AGFLELSNIVIKYA 336
           T+RD Q+L+N   +    ++EVKEL+ +DS  LF+ +AF Q   A   +++LS  V+ YA
Sbjct: 311 TSRDRQVLRN---AGADDIYEVKELNLDDSQKLFNLHAFKQKSSAEKSYMDLSEEVLGYA 367

Query: 337 NGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTA 396
            G+PLALQ+LGS L G + E WES + KLK+  H+ I  VLK+SYDGL++EE+NIFLD A
Sbjct: 368 EGIPLALQILGSLLYGRTREAWESELQKLKKGQHLGIFNVLKLSYDGLEEEEKNIFLDIA 427

Query: 397 CFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQES 456
           CF++G+++  V   LD   FS+KIG+  L  + L+++ + +I MHDL+QEMG EIVR+E 
Sbjct: 428 CFYRGHNEIAVAERLDDFGFSSKIGMDILKDRGLISVIDGRIVMHDLIQEMGKEIVRKEC 487

Query: 457 IKDPGKRSRLWHPEDIYQVLNENTSLPTGI-------------------------NLDSL 491
            + PGKRSRL++ E+I +VL +N  +P+                           ++  L
Sbjct: 488 PQHPGKRSRLFNAEEICEVLRKNEGVPSNFQNLKRLCHLDLSHCSSLTIFPFDLSHMKFL 547

Query: 492 KELYLGGCSNLKRFPEISCNIEDLD---LKETAIEEL----------------------- 525
           K+L L GCS L+  P+I   +EDL    L  TAI+ L                       
Sbjct: 548 KQLSLRGCSKLENLPQIQDTLEDLVVLILDGTAIQALPSSLCRLVGLQELSLCSCLNLEI 607

Query: 526 -PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            PSSIG+L+RL  LDLT+CS L++  S + NLK LR L+L GC  L   PE      + +
Sbjct: 608 IPSSIGSLTRLCKLDLTHCSSLQTFPSTIFNLK-LRNLDLCGCSSLRTFPEITEPAPTFD 666

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           ++NL     +++PSS   L  L  L L+ C  L+SLP
Sbjct: 667 HINLICTAVKELPSSFANLVNLRSLELRKCTDLESLP 703



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 3/123 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVD 537
           + P+ I    L+ L L GCS+L+ FPEI+      + ++L  TA++ELPSS  NL  L  
Sbjct: 631 TFPSTIFNLKLRNLDLCGCSSLRTFPEITEPAPTFDHINLICTAVKELPSSFANLVNLRS 690

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C+ L+S+ + + NLK L +L+ SGC +L ++P +IG L SL  L+L +     +P
Sbjct: 691 LELRKCTDLESLPNSIVNLKLLSKLDCSGCARLTEIPRDIGRLTSLMELSLCDSGIVNLP 750

Query: 598 SSM 600
            S+
Sbjct: 751 ESI 753


>gi|255561496|ref|XP_002521758.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538971|gb|EEF40568.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 876

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 288/707 (40%), Positives = 401/707 (56%), Gaps = 111/707 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R NF SHL +AL ++KI TF+D ++ RG EISPS++ AI+GSK+S++
Sbjct: 10  KYDVFLSFRGEDTRDNFTSHLYSALNKKKIFTFMDKEIKRGEEISPSIAKAIKGSKLSVI 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP--------------------- 113
           IFSE YA S+WCL+EL KILE K   GQIV+PVFY VDP                     
Sbjct: 70  IFSEKYAFSKWCLDELTKILECKKMNGQIVIPVFYRVDPVHVRNQRGSFACAFAKHEETL 129

Query: 114 --------------SDAGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                         ++AG     GW  +   P  ES LIE  V DISKKL+   PS +  
Sbjct: 130 KERMEKVESWRSALNEAGSIS--GWNSLVARP--ESKLIEEIVKDISKKLNQTSPSHSIG 185

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            LVG++S +++IES L    ++   +G+WG+GGIGKTT+A AI+  IS+ +E SYF+ N+
Sbjct: 186 -LVGIDSRLEQIESMLCLDMSDVRIIGVWGMGGIGKTTLAGAIFDQISAQYESSYFLGNV 244

Query: 220 RDESEKV--------------------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           R++ ++                         N+   F + RLSR K+L+V  D+    Q+
Sbjct: 245 REQLKRCLLAELREKLFSKILEEKNLDTRTPNLGNTFLKDRLSRKKILVVLDDVDSTMQL 304

Query: 260 -DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
            +LL G+ D F PGSR+I+T+RD Q+LKN     V  +++V+ L+ +++L LFS NAF +
Sbjct: 305 QELLPGQHDLFGPGSRIIVTSRDKQVLKN----VVDEIYKVEGLNQHEALQLFSLNAFKK 360

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           N P    +E+S  V  YA G PLAL+VLG  L   S+E+WESA+ KL+ +P+ +IQKVL+
Sbjct: 361 NSPTNDRVEISTRVADYAKGNPLALRVLGCALFDKSKEDWESALEKLRNVPNGEIQKVLR 420

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
            SYDGLD EE+NIFLD ACFF+G D+      LD C  S    IS L+ KSLV++  +K+
Sbjct: 421 FSYDGLDREERNIFLDIACFFRGEDRNYATKILDGCYSSVGFIISTLIDKSLVSVYRSKL 480

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD--SLKEL 494
            MHDLLQE G  IVR+E   +  KRSRLW+P+D+Y VL +   T    GI+LD  + +E+
Sbjct: 481 EMHDLLQETGWSIVREEP--ELEKRSRLWNPKDVYYVLTKKKGTKAIEGISLDLSTTREM 538

Query: 495 YL-----GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV 549
           +L      G  +L+     + N               SSIG   +   + L  C GL+S+
Sbjct: 539 HLECDAFAGMDHLRILKFYTSN---------------SSIGCKHK---MHLPGC-GLQSL 579

Query: 550 SSRLCNLK----SLRRLNLSGC---LKLEKLP----EEIGNLESLEYLNLAEKDFEKIPS 598
           S  L  L+      R L    C   L +  LP    E++     LEY     K    +PS
Sbjct: 580 SDELRYLQWHKFPSRSLPPKFCAENLVVLDLPHSNIEQLWKGVQLEYC----KKLVSLPS 635

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSS 644
            M +LS+L  + L  CK L+ LPELP    +  A  C S++  S+SS
Sbjct: 636 CMHKLSQLRSIYLSYCKSLRELPELPKSLKVLEAYDCRSMENFSSSS 682


>gi|224145016|ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1254

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 286/704 (40%), Positives = 398/704 (56%), Gaps = 98/704 (13%)

Query: 1   MASSSSSINMIPHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEIS 59
           MASSSS    + H  K+DVFLSFRG+D R+NF SHL  ALCR+KI+TFIDD L RG EI+
Sbjct: 1   MASSSS----VAHKRKYDVFLSFRGEDTRNNFTSHLYDALCRKKIKTFIDDGLERGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-- 117
           P+L   IE S+IS+VIFS+ YASS WC++ELVKILE K   GQIV+PVFY VDPSD    
Sbjct: 57  PALLKKIEESRISVVIFSKNYASSPWCVDELVKILECKETCGQIVLPVFYHVDPSDVDEQ 116

Query: 118 ------------------------------YCPSL-GWMGIFDIPTSESVLIEGNVNDIS 146
                                         Y  S+ GW     + + ES L+   V  I 
Sbjct: 117 TGSFGNAFSELENIFKGKMDKVPRWRADMTYAASISGWDS--QVTSPESKLVTEVVQTIW 174

Query: 147 KKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
           K+L+    S  +  LVGV+S I++I   L    ++   +GIWG+G IGKTTIA A + +I
Sbjct: 175 KRLNRASRSKLRG-LVGVDSRIEQINKLLSVVPSDVRRIGIWGMGAIGKTTIAEAFFYSI 233

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANI-------------------HL-NFERRRLSRMKV 246
           SS +EG +F+ NIR ESEK G L ++                   H+  F R RL + KV
Sbjct: 234 SSQYEGCHFLPNIRQESEK-GRLNDLRDELLSKLLEEENLRVGTPHIPTFIRDRLCQKKV 292

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L+V  D+ D++Q   LI  +    PGS +++T+RD Q+LKN     V  ++EV+EL+ ++
Sbjct: 293 LLVLDDVIDVRQFQHLI-EMPLIGPGSVLVVTSRDRQVLKN----VVDEIYEVEELNSHE 347

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L LFS NAF  NHP   ++ELS   I YA G PLALQVLGSYL     + WES +N+++
Sbjct: 348 ALQLFSLNAFKGNHPPKAYMELSITAINYAKGNPLALQVLGSYLFDKGRQFWESQLNEIE 407

Query: 367 RMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
             P ++I  +L++ +D L D+  ++IFLD ACFF+G+    V   LD C F    G S L
Sbjct: 408 SFPELNIYDLLRIGFDALRDNNTKSIFLDVACFFRGHRVDFVKRILDGCGFKTDTGFSVL 467

Query: 426 VGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLP 483
           + + L+ IS++K+ MHDLLQEM  E+VR+ES+ + G++SRLW P+D+YQVL  N  T   
Sbjct: 468 IDRCLIKISDDKVEMHDLLQEMAHEVVRKESVDELGRQSRLWSPKDVYQVLTNNLGTGKV 527

Query: 484 TGINLD--SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR------- 534
            GI LD    +E+ L   +  + +      I + +        LP  + +LS        
Sbjct: 528 EGIFLDVSKTREIELSSTALERMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELRYLHW 587

Query: 535 ----------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
                           LV+L+L++ S +K +     NL +L+ +NLS C  +  LP ++ 
Sbjct: 588 DGYPLTSLPCNFRPQNLVELNLSS-SNVKQLWRGDQNLVNLKDVNLSNCEHITLLP-DLS 645

Query: 579 NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
              +LE LNL       K PSS++ L KL DL L+ CKRL +LP
Sbjct: 646 KARNLERLNLQFCTSLVKFPSSVQHLDKLVDLDLRGCKRLINLP 689



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 55/229 (24%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI----------- 529
            LP+ I +L  L  L L GCS++  FP++S NI +L L  TAI E+PSSI           
Sbjct: 799  LPSSIGDLRELIYLDLSGCSSITEFPKVSRNIRELYLDGTAIREIPSSIQLNVCVNFMNC 858

Query: 530  -------------------------GNLSRLVDLDLTNCSGLKSVS--------SRLCNL 556
                                     GNL  L  L++ NC  LK +          R  +L
Sbjct: 859  TCETANNLRFFQAASTGITKLPSPVGNLKGLACLEVGNCKYLKGIECLVDLHLPERDMDL 918

Query: 557  KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
            K LR+LNL GC  + K+P+ +G L SLE L+L+  +FE +P ++ +L +L  L L++C++
Sbjct: 919  KYLRKLNLDGCC-ISKVPDSLGCLSSLEVLDLSGNNFETMPMNIYKLVELQYLGLRSCRK 977

Query: 617  LQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFN--FSNC 662
            L+S+P LP   S + A  C SL  +S+S  +        +IF   F+NC
Sbjct: 978  LKSIPRLPRRLSKLDAHDCQSLIKVSSSYVV------EGNIFEFIFTNC 1020



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 3/143 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LP+  N   L+ L L GCSN+K+ PE +  +  L+L ETA+EELP SIG L  LV L+L
Sbjct: 687 NLPSRFNSSFLETLNLSGCSNIKKCPETARKLTYLNLNETAVEELPQSIGELGGLVALNL 746

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  L ++   +  LKSL   ++SGC  + + P+   N   + YL L     E++PSS+
Sbjct: 747 KNCKLLVNLPENMYLLKSLLIADISGCSSISRFPDFSRN---IRYLYLNGTAIEELPSSI 803

Query: 601 KQLSKLSDLRLQNCKRLQSLPEL 623
             L +L  L L  C  +   P++
Sbjct: 804 GDLRELIYLDLSGCSSITEFPKV 826



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 13/136 (9%)

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
           + GCS++ RFP+ S NI  L L  TAIEELPSSIG+L  L+ LDL+ CS +        N
Sbjct: 770 ISGCSSISRFPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDLSGCSSITEFPKVSRN 829

Query: 556 LKSL-----------RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
           ++ L             + L+ C+       E  N  +L +   A     K+PS +  L 
Sbjct: 830 IRELYLDGTAIREIPSSIQLNVCVNFMNCTCETAN--NLRFFQAASTGITKLPSPVGNLK 887

Query: 605 KLSDLRLQNCKRLQSL 620
            L+ L + NCK L+ +
Sbjct: 888 GLACLEVGNCKYLKGI 903


>gi|147802475|emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 293/729 (40%), Positives = 391/729 (53%), Gaps = 127/729 (17%)

Query: 13  HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKI 71
           H  +DVFLSFRG+D R +F  HL AAL  + + TF DD+ L RG EI+P L  AIE S+I
Sbjct: 14  HWNYDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAPELLKAIEESRI 73

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---------------- 115
           S+V+FS+ YA S WC++ELVKI+E     GQ V+PVFY VDP+                 
Sbjct: 74  SVVVFSKNYARSGWCMDELVKIIECMKAKGQTVLPVFYDVDPTHVRKQTGSFMEAFASHG 133

Query: 116 -------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                        A    +    G       ES LI+  + +I  KLS      +K  LV
Sbjct: 134 EDTEVIERAKRWRAALTQAANLSGWHLQNGYESKLIKKIIEEILSKLSRKLLYVDK-HLV 192

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQNI 219
           GV S +KEI   LL  S E N V + GI GIG   KTTIA  +Y+ ISS FEG  F+ NI
Sbjct: 193 GVSSRLKEI---LLRVSIESNDVRMVGICGIGGVGKTTIAKVVYNLISSQFEGISFLANI 249

Query: 220 RDESEKVGGL-------ANIHLNFERR-------------RLSRMKVLIVFYDLTDLKQI 259
           R+ S+  G L        +I + + +R             RL   KVLI+  D+ DL Q+
Sbjct: 250 REVSKNCGLLPLQKQLLGDILMGWSQRISNLBEGINVLMDRLHSKKVLIILDDVDDLNQL 309

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G +D F  GSR++ITTRD  LL  H    V  ++E KEL   ++L LFS+ AF + 
Sbjct: 310 ESLAGNVDWFGIGSRIVITTRDKHLLNVHG---VSEIYEAKELEPEEALQLFSQYAFKRK 366

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P   ++ LS+ V+ YA G+PLAL+VLGS+L   +  EWES ++KLK+  +  +Q VL++
Sbjct: 367 SPXKDYMNLSDNVVHYAKGLPLALKVLGSFLFSKTILEWESELHKLKKELNTKVQDVLRI 426

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           S+DGLD  ++ IFLD ACFFKG +   V+  LD C F AK GI  L  + L+ + +N++ 
Sbjct: 427 SFDGLDFTQKEIFLDLACFFKGQEYDFVIKILDGCGFHAKSGIRVLSDRCLIDLLDNRLW 486

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-----------------SL 482
           MHDL+Q+MG EIVRQE  KDPGK SRLW  E IY VL +NT                  L
Sbjct: 487 MHDLIQQMGWEIVRQECPKDPGKWSRLWDYEHIYSVLKKNTVLDNLNTIELSNSQHLIHL 546

Query: 483 PTGINLDSLKELYLGGC------------------------------------------- 499
           P   ++ +L+ L L GC                                           
Sbjct: 547 PNFSSMPNLERLVLEGCTSFLEVDPSIEVLNKLIFLNLKNCKKLRSFPRSIKLECLKYLS 606

Query: 500 ----SNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
               S+LK FPEI  N++   +L L  TAI ELP SIG L+ L+ LDL NC  LKS+ S 
Sbjct: 607 LSGCSDLKNFPEIQGNMQHLSELYLDGTAISELPFSIGYLTGLILLDLENCKRLKSLPSS 666

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           +C LKSL  L LS C KLE  PE + N+E L+ L L     +++  S++ L+ L  L L+
Sbjct: 667 ICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLVSLNLR 726

Query: 613 NCKRLQSLP 621
           +CK L +LP
Sbjct: 727 DCKNLATLP 735



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 107/215 (49%), Gaps = 31/215 (14%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
            +LP  I NL SL+ L + GCS L++ PE    + C ++ L    T + + PSSI  L  
Sbjct: 732 ATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVK-LQADGTLVRQPPSSIVLLRN 790

Query: 535 LVDLDLTNCSGLKSVS----------------------SRLCNLKSLRRLNLSGCLKLE- 571
           L  L    C GL S S                        L  L SLR L++S C  +E 
Sbjct: 791 LEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEG 850

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            +P +I NL SLE LNL+  +F  +P+ + +LSKL  L L +CK L  +PELP     ++
Sbjct: 851 AVPFDICNLSSLETLNLSRNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVN 910

Query: 631 ARHCTSLKT-LSNSSTLLTRSSKHWDIFNFSNCSN 664
           A++C+SL T L+ SS    +    W +F   NC N
Sbjct: 911 AQYCSSLNTILTPSSVCNNQPVCRWLVFTLPNCFN 945



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 4/143 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SL+ L L  CS L+ FPEI  N+E L    L  TA+++L  SI +L+ LV
Sbjct: 662 SLPSSICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLV 721

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L +C  L ++   + NLKSL  L +SGC KL++LPE +G+L+ L  L        + 
Sbjct: 722 SLNLRDCKNLATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQP 781

Query: 597 PSSMKQLSKLSDLRLQNCKRLQS 619
           PSS+  L  L  L    CK L S
Sbjct: 782 PSSIVLLRNLEILSFGGCKGLAS 804


>gi|356550897|ref|XP_003543819.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 970

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 290/740 (39%), Positives = 398/740 (53%), Gaps = 134/740 (18%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R NF SHL  AL ++KIET+ID +L +G+EIS +L  AIE S +S+V
Sbjct: 19  KYDVFLSFRGEDTRKNFTSHLYEALKQKKIETYIDYRLEKGDEISAALIKAIEDSHVSVV 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS---------DAGYCPSLG-- 123
           IFSE YASS+WCL EL KI+E K + GQIV+PVFY +DPS         +  +    G  
Sbjct: 79  IFSENYASSKWCLGELGKIMECKKERGQIVIPVFYNIDPSHVRKQTGSYEQSFAKHTGEP 138

Query: 124 ----W---------MGIFD--IPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESII 168
               W         +  +D  I  +ES  ++  V D+ +KL+  +P+  K +LVGVE   
Sbjct: 139 RCSKWKAALTEAANLAAWDSQIYRTESEFLKDIVKDVLRKLAPRYPNHRK-ELVGVEENY 197

Query: 169 KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG 228
           ++IES L  GS++   +GIWG+GGIGKTT+ASA+Y  +S  FEG  F+ N+R+ES+K G 
Sbjct: 198 EKIESLLKIGSSKVRILGIWGMGGIGKTTLASALYDKLSPEFEGCCFLANVREESDKHGF 257

Query: 229 -----------LANIHLNFERR----------RLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
                      L N +L F+            RL R KV IV  D+   +Q++ LI   D
Sbjct: 258 KALRNKLFSELLENENLCFDASSFLVSHFVLSRLGRKKVFIVLDDVDTSEQLENLIEDFD 317

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
               GSRVI+TTR+ Q+      S+V  +++VKELS + SL LF  + F +  P  G+ +
Sbjct: 318 FLGLGSRVIVTTRNKQIF-----SQVDKIYKVKELSIHHSLKLFCLSVFREKQPKHGYED 372

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LS   I Y  G+PLAL+VLG+ L+  S++ WE  + KL++ P+M+I  VLK+SYDGLD  
Sbjct: 373 LSRSAISYCKGIPLALKVLGASLRSRSKQAWECELRKLQKFPNMEIHNVLKLSYDGLDYS 432

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQE 446
           ++ IFLD ACF +G  +  V + L+A  F A  GI  L+ K+L+TIS   +I MHDL+QE
Sbjct: 433 QKEIFLDIACFLRGKQRDHVTSILEAFDFPAASGIEVLLDKALITISGGIQIEMHDLIQE 492

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE---------------------------- 478
           MG +IV QE IKDPG+RSRLW  E+++ VL                              
Sbjct: 493 MGWKIVHQEHIKDPGRRSRLWKHEEVHDVLKYNKGTEVVEGVILDLSKLTEDLYLSFDFL 552

Query: 479 --------------------NTSLPTGINLDSLKELYL---GGCSNLKRFPEISC--NIE 513
                               N  LP G++  S K  YL   G C  L+  P   C   + 
Sbjct: 553 AKMTNVRFLKIHSWSKFTIFNVYLPNGLDSLSYKLRYLHWDGFC--LESLPSRFCAEQLV 610

Query: 514 DLDLKETAIEELPSSIGNLSRL--VDL----------DLTNCSGLKSVS----SRLCNL- 556
           +L +  + +++L   + NL  L  +DL          DL+    L+SVS      LC L 
Sbjct: 611 ELCMHCSKLKKLWDGVQNLVNLKTIDLWGSRDLVEIPDLSKAEKLESVSLCYCESLCQLQ 670

Query: 557 ---KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
              KSL  LNL GC     L E +   E L  LNLA      +PSS+ Q  KL  L L+ 
Sbjct: 671 VHSKSLGVLNLYGC---SSLREFLVTSEELTELNLAFTAICALPSSIWQKRKLRSLYLRG 727

Query: 614 CKRLQSLPELP--CGSSIHA 631
           C  L  L + P  CGS  H+
Sbjct: 728 CHNLNKLSDEPRFCGSYKHS 747



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 26/156 (16%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           ++  SL  L L GCS+L+ F   S  + +L+L  TAI  LPSSI                
Sbjct: 671 VHSKSLGVLNLYGCSSLREFLVTSEELTELNLAFTAICALPSSIW--------------- 715

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY-LNLAEKDFEKIPSSMKQLS 604
                      + LR L L GC  L KL +E     S ++ +     + +++P +++ LS
Sbjct: 716 ---------QKRKLRSLYLRGCHNLNKLSDEPRFCGSYKHSITTLASNVKRLPVNIENLS 766

Query: 605 KLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
            ++ + L +C++L SLPELP     + A +CTSL T
Sbjct: 767 MMTMIWLDDCRKLVSLPELPLFLEKLSACNCTSLDT 802


>gi|225460354|ref|XP_002263146.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1174

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 280/752 (37%), Positives = 392/752 (52%), Gaps = 148/752 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R +F  HL+  L R+ I+TF DD+L RG +ISP+L  AIE S+ SI+
Sbjct: 22  KYDVFLSFRGEDTRKSFTDHLHRELRRKWIKTFRDDQLRRGEQISPALLKAIEESRFSII 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           IFS+ YASS WCL+EL KIL+     G   +PVFY VDPS                D  Y
Sbjct: 82  IFSKNYASSSWCLDELTKILDCVEVMGHTAIPVFYNVDPSHVRKQTESFAEAFAKHDHIY 141

Query: 119 CPS----LGWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                  L W     + +           E+ +I+  V  I  KL D   S N + LVG+
Sbjct: 142 GDKSEKVLKWRKALTVASGLSGYDSRDRHETEVIDEVVTMIFNKLIDA-SSSNMEGLVGM 200

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF-EGSYFMQNIRDES 223
            S ++++   L  GS +   VGIWG+ GIGK+TIA  +Y+ I + F EG  F+ N+R+ES
Sbjct: 201 GSRLQDMAQLLDIGSVDVRMVGIWGMAGIGKSTIAYQVYNKIYAQFDEGYCFLPNVREES 260

Query: 224 EKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           ++ G                   G  N  +NF + RL   KVLIV  D+   +Q+++L G
Sbjct: 261 QRHGLAYLQEELLSQISGGNLNKGNFNRGINFIKERLHSRKVLIVLDDVDMYEQLEVLAG 320

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F  GSR+IITT+D  LL  H    V  ++ V+ L YN++L LF   AF  + P A 
Sbjct: 321 NHDWFGAGSRIIITTKDKTLLNMH---GVDAIYNVEGLKYNEALKLFCWCAFKHDLPTAD 377

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +++L    +KY  G+PLA++VLGS++K  + +EW+SA++KLKR+PH D+QKVL++S+DGL
Sbjct: 378 YMQLCKNFVKYIEGLPLAIKVLGSFVKNKTIDEWKSALDKLKRIPHKDVQKVLRISFDGL 437

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD +++IFLD ACFFKG D+  V   L++C F     I  L   SL+ +SNNK+ MH+LL
Sbjct: 438 DDNQKDIFLDIACFFKGQDKDFVAKILESCDFFPANDIRVLEENSLILVSNNKLCMHNLL 497

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKELYL--GG 498
           QEMG EIVRQE++K PGKRSRLW  +++  VL  NT      G+ LD  + KEL+   G 
Sbjct: 498 QEMGWEIVRQENVKYPGKRSRLWFHDEVNHVLTTNTGTEAVEGLVLDLSASKELHFSAGA 557

Query: 499 CSNLKR--------------FPEISCNIEDLDLKETAIEELPSSIG-------------- 530
            + + R                 +S N+  L   E  ++ LPS+                
Sbjct: 558 FTEMNRLRVLRFYNVKMNGNLKFLSNNLRSLYWHEYPLKSLPSNFHPKKLVELNMCSSRL 617

Query: 531 ----------------------------------NLSRLVDLDLTNCSGLKSVSSRLCNL 556
                                             NL RL+   L  C+ +  V   +  L
Sbjct: 618 EQLWKGDKSFEKLKFIKLSHSQYLTRTPDFSGAPNLERLI---LEGCTSMVKVHPSIGAL 674

Query: 557 KSLRRLNL-----------------------SGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
           + L  LNL                       SGC KL+K PE + N++SL  L L E   
Sbjct: 675 QKLIFLNLEGCKNLKSFASSIHMNSLQILTLSGCSKLKKFPEMLENMKSLRQLLLDETAL 734

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            ++PSS+ +L+ L  L L NCK+L SLP+  C
Sbjct: 735 RELPSSIGRLNGLVLLNLTNCKKLVSLPQSLC 766



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 7/173 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPE+  N++ L    L ETA+ ELPSSIG L+ LV 
Sbjct: 690 SFASSIHMNSLQILTLSGCSKLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVL 749

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+LTNC  L S+   LC L SL+ L L+GC +L+KLP+E+G+L  L  LN      +++P
Sbjct: 750 LNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVP 809

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRS 650
            S+  L+ L  L L  CK+   +  L    ++    C  L++L N S++ T S
Sbjct: 810 PSITLLTNLQVLSLAGCKKRNVVFSLWSSPTV----CLQLRSLLNLSSVKTLS 858


>gi|359496026|ref|XP_002277166.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1250

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 299/724 (41%), Positives = 392/724 (54%), Gaps = 122/724 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VFLSFRG+D RH F +HL  AL R  I TFIDD  L RG  ISP+L  AIE S  SIV
Sbjct: 22  YEVFLSFRGEDTRHGFTAHLYDALRRRGINTFIDDADLKRGRVISPALVQAIENSMFSIV 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP-SLG---------- 123
           + SE YASSRWCL ELVKILE  N     V P+FY VDPSD      S G          
Sbjct: 82  VLSENYASSRWCLEELVKILECMNAGSLTVFPIFYKVDPSDVRKQKGSFGEAFVEHEKNS 141

Query: 124 ------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                 W           G       E  LI+  V+D+  +L  +  SD  D LVG++S 
Sbjct: 142 NERVKTWREALTQVANLSGWDSRNRHEPSLIKDVVSDVFNRLLVISSSDAGD-LVGIDSH 200

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG 227
           I+++ES L  GS +   +GIWG+GGIGKTTIA ++Y  IS  FE   F+ N+R++SEK G
Sbjct: 201 IRKMESLLSIGSNDVRIIGIWGMGGIGKTTIARSVYEQISKQFEACCFLSNVREDSEKRG 260

Query: 228 --------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
                                  +I L F + RL   +VLIV  D  +L+Q++ L G+ D
Sbjct: 261 LVKLQEELLSRLLEEGKISISTVDIGLAFIKTRLRFKRVLIVLDDAHNLQQLEYLAGKHD 320

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F PGSR+IITTRDV LL N  G  V  V+EV  L+ ND++ LFSR+AF ++HP   ++E
Sbjct: 321 WFGPGSRIIITTRDVHLL-NKVG--VNGVYEVAHLNNNDAVALFSRHAFEEDHPTEDYME 377

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LSN  + YA G+PLAL+VLGS+L   S+ EW+S ++KL+  PHMDI+ VL+VS+DGLDD 
Sbjct: 378 LSNYAVSYAKGLPLALKVLGSFLFSKSKLEWKSQLDKLQINPHMDIESVLRVSFDGLDDT 437

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           EQ+IFLD ACFFKG D+  V+  LD+C F   IGI  L+ KSL+T+ +NK+ MHDLLQEM
Sbjct: 438 EQDIFLDVACFFKGEDKDYVIKILDSCGFYPSIGIRVLIDKSLITVVHNKLWMHDLLQEM 497

Query: 448 GGEIVRQESIK--------DPGKRSRLWHPEDIYQVLNENTSLPT--GI--NLDSLKEL- 494
           G +IVR+ S K        DPGK SRLW  ED+Y VL E T      GI  NL  LKE+ 
Sbjct: 498 GWDIVRKTSHKNPSKRRRLDPGKHSRLWLQEDVYDVLTEKTGTENIEGIFLNLYGLKEIH 557

Query: 495 ---------------------------YLGGCSNLKR-----FPEISCNIEDLDLKETAI 522
                                      Y     N KR     F   S  +  L      +
Sbjct: 558 YTTEAFAEMKKLRLLKVYNSHNSGDFEYASRNENYKRPFSQDFEFPSNKLRYLYWHRYPL 617

Query: 523 EELPSSIGNLSRLVDLDLTNC------SGLKSVSSRLC----------------NLKSLR 560
           + LPS+  +   LV+L+L  C       G+K +    C                 + +L 
Sbjct: 618 KSLPSNF-HPKNLVELNLCCCYVEELWKGVKHMEKLECIDLSHSQYLVRTPDFSGIPNLE 676

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           RL   GC  L ++ + +G L  L +LNL + K+ +  PSS+ +L  L  L L  C +L +
Sbjct: 677 RLIFEGCTDLREVHQSLGVLSKLIFLNLKDCKNLQCFPSSI-ELESLKVLILSGCSKLDN 735

Query: 620 LPEL 623
            PE+
Sbjct: 736 FPEI 739



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/136 (49%), Positives = 83/136 (61%), Gaps = 3/136 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            P+ I L+SLK L L GCS L  FPEI  N+E   +L L  TAI+ELP S+ +L+ LV L
Sbjct: 713 FPSSIELESLKVLILSGCSKLDNFPEILENMEGLRELFLDGTAIKELPLSVEHLNGLVLL 772

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           +L NC  L ++ S +CNLKSL  L LSGC +LEKLPE +GNLE L  L        + PS
Sbjct: 773 NLRNCERLITLPSSICNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPS 832

Query: 599 SMKQLSKLSDLRLQNC 614
           S+  L  L  L  Q C
Sbjct: 833 SIVLLRNLKVLSFQGC 848



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 103/196 (52%), Gaps = 33/196 (16%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           +LP+ I NL SL  L L GCS L++ PE   N+E   +L    +A+ + PSSI  L  L 
Sbjct: 782 TLPSSICNLKSLSTLTLSGCSQLEKLPENLGNLECLVELVADGSAVIQPPSSIVLLRNLK 841

Query: 537 DLDLTNCSGLKSVSSR------------------------LCNLKSLRRLNLSGC-LKLE 571
            L    C+G  S SSR                        L  L SL++LNLS C +K  
Sbjct: 842 VLSFQGCNG--SPSSRWNSRFWSMLCLRRISDSTGFRLPSLSGLCSLKQLNLSDCNIKEG 899

Query: 572 KLPEEIGN-LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
            LP ++G  L SLEYLNL   DF  +P+ + +L  L  L L  CKRLQ LP LP   + I
Sbjct: 900 ALPNDLGGYLSSLEYLNLKGNDFVTLPTGISKLCNLKALYLGCCKRLQELPMLPPNINRI 959

Query: 630 HARHCTSLKTLSNSST 645
           +A++CTSL+TLS  S 
Sbjct: 960 NAQNCTSLETLSGLSA 975



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 8/161 (4%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           +++ L+ + L     L R P+ S   N+E L  +  T + E+  S+G LS+L+ L+L +C
Sbjct: 648 HMEKLECIDLSHSQYLVRTPDFSGIPNLERLIFEGCTDLREVHQSLGVLSKLIFLNLKDC 707

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L+   S +  L+SL+ L LSGC KL+  PE + N+E L  L L     +++P S++ L
Sbjct: 708 KNLQCFPSSI-ELESLKVLILSGCSKLDNFPEILENMEGLRELFLDGTAIKELPLSVEHL 766

Query: 604 SKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTL 640
           + L  L L+NC+RL +LP   C     S++    C+ L+ L
Sbjct: 767 NGLVLLNLRNCERLITLPSSICNLKSLSTLTLSGCSQLEKL 807


>gi|359495270|ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1154

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 284/717 (39%), Positives = 393/717 (54%), Gaps = 114/717 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R+NF +HL  ALC++ I TFIDD KL RG  ISP+L +AIE S  SI
Sbjct: 14  RYDVFLSFRGEDTRNNFTAHLYHALCQKGINTFIDDDKLERGQVISPALVAAIENSMFSI 73

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSLG----- 123
           V+ S+ YA SRWCL ELVKI+E      Q VVP+FY VDPSD       +  +L      
Sbjct: 74  VVLSKNYAFSRWCLQELVKIVECMKSRRQRVVPIFYNVDPSDVRRQRGIFGEALAKHEEN 133

Query: 124 ---------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W           G      +E +LI+  V DI  KL     SD ++ LVG+
Sbjct: 134 SENMERVQSWKDALTQVANLSGWDSRNKNEPLLIKEIVTDILNKLLSTSISDTEN-LVGI 192

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ++ ++EIE +L  GS +F  VGIWG+GGIGKTT+A AIY  I+  FE   F +N+ ++  
Sbjct: 193 DARMQEIEMRLCLGSDDFLMVGIWGMGGIGKTTLARAIYRKITCQFEACCFFENVGEDLA 252

Query: 225 KVG-------GLANI----HLNFE-----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
           K G        LA +    +LN +     + RL   KVLIV  ++ D   +  L+G  D 
Sbjct: 253 KEGLIGLQQKFLAQLLEEPNLNMKALTSIKGRLHSKKVLIVLDNVNDPIILKCLVGNYDW 312

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F  GSR+IITTRD +LL +H    V + +E +  +Y+++    +  +     P   F+E+
Sbjct: 313 FGRGSRIIITTRDKRLLISH---GVLNYYEAQRFNYDEASEFLTPYSLKHKIPCDDFMEV 369

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           S  VI YA G+PLAL+VLGS+L  M++EEW + ++KLK  P+M IQ+VLKVSYDGLDD+E
Sbjct: 370 SKEVIGYAQGLPLALEVLGSFLFSMTKEEWRNQLDKLKSTPNMKIQEVLKVSYDGLDDKE 429

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEM 447
           +NI LD ACFFKG D+  VM  LD C F +  GI  L+ KSLVTIS +N+I MHDL+QEM
Sbjct: 430 KNILLDIACFFKGEDKDYVMEILDGCGFFSLSGIRALIDKSLVTISWSNEIMMHDLIQEM 489

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI--NLDSLKELY------LG 497
           G EIVRQ+S+++PGKRSRLW  EDI  VL +NT+     GI  NL  L+E+       L 
Sbjct: 490 GREIVRQQSLEEPGKRSRLWFHEDINGVLKKNTATEKIEGIFLNLSHLEEMLYFTTQALA 549

Query: 498 GCSNLKRF-----PEISCNIED-------------------------------------- 514
           G + L+         IS N +D                                      
Sbjct: 550 GMNRLRLLKVYNSKNISRNFKDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYSLKSLPND 609

Query: 515 --------LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
                   L +  + I++L   I  L+ L  +DL++   L   +     + +L+RL L G
Sbjct: 610 FNPKNLVELSMPYSRIKQLWKGIKVLANLKFMDLSHSKYLIE-TPNFRGVTNLKRLVLEG 668

Query: 567 CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           C+ L K+   +G+L++L +LNL   +  + +PSS   L  L    L  C + +  PE
Sbjct: 669 CVSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFPE 725



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/184 (42%), Positives = 97/184 (52%), Gaps = 25/184 (13%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+   +L SL+   L GCS  K FPE   ++E   +L   E AI  LPSS   L  L 
Sbjct: 698 SLPSSTCDLKSLETFILSGCSKFKEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQ 757

Query: 537 DLDLTNCSG---------------LKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNL 580
            L    C G               + S+   L  L+SL RLNLS C L  E     +G L
Sbjct: 758 ILSFKGCKGPSSTLWLLPRRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFL 817

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSL 637
            SLE L L   DF  +PS++ QLS L+ L L+NCKRLQ LPELP  SSI+   A +CTSL
Sbjct: 818 SSLEELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELP--SSIYYICAENCTSL 875

Query: 638 KTLS 641
           K +S
Sbjct: 876 KDVS 879



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 9/118 (7%)

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
           G +NLKR     C          ++ ++ SS+G+L  L+ L+L NC  LKS+ S  C+LK
Sbjct: 657 GVTNLKRLVLEGC---------VSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLK 707

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           SL    LSGC K ++ PE  G+LE L+ L   E     +PSS   L  L  L  + CK
Sbjct: 708 SLETFILSGCSKFKEFPENFGSLEMLKELYADEIAIGVLPSSFSFLRNLQILSFKGCK 765


>gi|356524185|ref|XP_003530712.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 882

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 236/515 (45%), Positives = 330/515 (64%), Gaps = 48/515 (9%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVFLSFRG+D R +F SHL  +L   K++T+IDD+L +G EISP+L+ AIE S++SIV
Sbjct: 24  QYDVFLSFRGEDTRRSFTSHLYESLNEVKVQTYIDDRLEKGEEISPTLTKAIENSRVSIV 83

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------------------- 114
           IFSE YASS+WCL EL+KI+ESK + GQIV+PVFY +DPS                    
Sbjct: 84  IFSENYASSKWCLGELIKIMESKKEKGQIVIPVFYNIDPSHVRKQTGSYEQAFEKHEGEP 143

Query: 115 -----DAGYCPSLGWMGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                      + G  G FD     ++  L++  V  + +KL   + +  K  L+G+E  
Sbjct: 144 RCNKWKTALTEAAGLAG-FDSRNYRTDPELLKDIVGAVLRKLPPRYQNQRKG-LIGIEDH 201

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG 227
            K+IES L  GS+E  T+GIWG+GGIGKTT+A+ +Y  +S  FE + F+ N+ ++S+K  
Sbjct: 202 CKQIESLLKIGSSEVKTLGIWGMGGIGKTTLATTLYDKLSHKFEDACFLANLSEQSDKPK 261

Query: 228 G-------LANI-HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD-GFV-PGSRVII 277
                   +AN+  L+    RL   KVLI+  D+T  +Q+D +I   D  F+ PGSRVI+
Sbjct: 262 NRSFGNFDMANLEQLDKNHSRLQDKKVLIILDDVTTSEQLDKIIPDFDCDFLGPGSRVIV 321

Query: 278 TTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYAN 337
           TTRD Q+L     SRV  ++ V E S++ SL LF   AFG+  P  G+ +LS +V+ Y  
Sbjct: 322 TTRDKQIL-----SRVDEIYPVGEWSFDKSLQLFCLTAFGEKQPNDGYADLSRMVVSYCK 376

Query: 338 GVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTAC 397
           G+PLAL+VLG+ L+  S+E WE  + KL+++P+ +I KVLK+SYDGLD  EQ+IFLD AC
Sbjct: 377 GIPLALKVLGASLRSRSKEIWECELRKLQKIPNKEIHKVLKLSYDGLDRSEQDIFLDIAC 436

Query: 398 FFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQES 456
           FFKG D+  V   L+A  F    GI+ L+ K+L+TIS+ N I MHDL+QEMG EIV QES
Sbjct: 437 FFKGRDRCWVTRVLEAFEFFPAPGINILLDKALITISDSNLILMHDLIQEMGREIVHQES 496

Query: 457 IKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD 489
            KDPG+R+RLW  E+++ VL  N+ T +  GI+LD
Sbjct: 497 -KDPGRRTRLWRHEEVHDVLKYNKGTDVVEGISLD 530



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 76/159 (47%), Gaps = 31/159 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +    LK+L+  G  NL    EI     DL   E  IE     I NLS   +L+  + SG
Sbjct: 673 MKFSKLKKLW-DGVQNLVNLKEI-----DLSYSEDLIE-----IPNLSEAENLESISLSG 721

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEK--------------------LPEEIGNLESLEY 585
            KS+     + KSLR + L GC  L++                    L   IG+L SLE 
Sbjct: 722 CKSLHKLHVHSKSLRAMELDGCSSLKEFSVTSEKMTKLNLSYTNISELSSSIGHLVSLEK 781

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           L L   + E +P+++K LS L+ LRL  C++L SLPELP
Sbjct: 782 LYLRGTNVESLPANIKNLSMLTSLRLDGCRKLMSLPELP 820


>gi|359493398|ref|XP_003634586.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 270/676 (39%), Positives = 381/676 (56%), Gaps = 63/676 (9%)

Query: 1   MASSS---SSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNE 57
           MASS+   SS   +   + +VFLSFRG+D R+NF  HL   L    I+TF DD+L RG E
Sbjct: 1   MASSTQKPSSSTSVRKYEFEVFLSFRGEDTRNNFTDHLFVNLHGMGIKTFRDDQLERGEE 60

Query: 58  ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA- 116
           I   L   IE S+ISIV+FS+ YA S+WCL+EL KI+E + +  QIV PVFY +DP D  
Sbjct: 61  IKSELLKTIEESRISIVVFSKNYAHSKWCLDELAKIMECREEMEQIVFPVFYHLDPCDVR 120

Query: 117 ------GYCPSLGWMGI--------FDIPTSESVLIEGNVND------ISKKLSDLFPSD 156
                 G   S+    +         D  T  S L   +VND      I + ++ +F   
Sbjct: 121 KQTGSFGEAFSIHERNVDAKKVQRWRDSLTEASNLSGFHVNDGYESKHIKEIINQIFRRS 180

Query: 157 N-------KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                    D +VG++  +KE++S L S   +   VGI+G GGIGKTTIA  +Y+ I   
Sbjct: 181 MNSKLLHINDDIVGMDFRLKELKSLLSSDLNDIRMVGIYGPGGIGKTTIAKIVYNEIQYQ 240

Query: 210 FEGSYFMQNIRDESEK--------------VGG---LANIH--LNFERRRLSRMKVLIVF 250
           F G+ F+Q++R+   K              VG     +NI+  +N  + RL   KVLIV 
Sbjct: 241 FTGASFLQDVRETFNKGYQLQLQQQLLHDTVGNDVEFSNINKGVNIIKSRLRSKKVLIVI 300

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+  L+Q++ + G    F PGS +IITTRD  LL  + G  + H  +   L Y ++L L
Sbjct: 301 DDVDRLQQLESVAGSPKWFGPGSTIIITTRDQHLLVEY-GVTISH--KATALHYEEALQL 357

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
           FS++AF QN P   +++LSN +++YA G+PLAL+V+GS L+GM+ +EW+SA +KLK+ P 
Sbjct: 358 FSQHAFKQNVPKEDYVDLSNCMVQYAQGLPLALKVVGSSLQGMTIDEWKSASDKLKKNPM 417

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
            +I  VL++S+DGLD  ++ +FLD ACFFKG  +  V   LD C   A   I  L  + L
Sbjct: 418 KEINDVLRISFDGLDPSQKEVFLDIACFFKGECKDFVSRILDGCNLFATCNIRVLHDRCL 477

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDS 490
           VTIS+N I MHDL+ EMG  IVR+E   DP K SRLW  +DIY   +          L+ 
Sbjct: 478 VTISDNMIQMHDLIHEMGWAIVREECPGDPCKWSRLWDVDDIYDAFSRQEC------LEE 531

Query: 491 LKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           LK + L     L + P+ S   N+E L+L+  T++ EL SSIG+L  L  L+L  C  L+
Sbjct: 532 LKGIDLSNSKQLVKMPKFSSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLR 591

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           S  S +   +SL  L L+ C  L+K PE  GN+E L+ L L E   +++PSS+  L+ L 
Sbjct: 592 SFPSSM-KFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLE 650

Query: 608 DLRLQNCKRLQSLPEL 623
            L L NC   +  P++
Sbjct: 651 VLNLSNCSNFEKFPKI 666



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 11/177 (6%)

Query: 478  ENTS---LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIG 530
            ENT+   LP  I  L +L+ L L GCSNL+RFPEI  N+ +L    L ETAIE LP S+G
Sbjct: 844  ENTAIKELPNSIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVG 903

Query: 531  NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
            +L+RL  L+L NC  LKS+ + +C LKSL  L+L+GC  LE   E   ++E LE L L E
Sbjct: 904  HLTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRE 963

Query: 591  KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
                ++PSS++ L  L  L L NC+ L +LP     L C +S+H R+C  L  L ++
Sbjct: 964  TGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDN 1020



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 8/175 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S P+ +  +SL+ LYL  C NLK+FPEI  N+E   +L L E+ I+ELPSSI  L+ L  
Sbjct: 592 SFPSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEV 651

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L+NCS  +       N+K LR L L GC K E  P+    +  L  L+L +   +++P
Sbjct: 652 LNLSNCSNFEKFPKIHGNMKFLRELYLEGCPKFENFPDTFTYMGHLRRLHLRKSGIKELP 711

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLT 648
           SS+  L  L  L +  C + +  PE    + C  +++ R  T+++ L NS   LT
Sbjct: 712 SSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRK-TAIQELPNSIGSLT 765



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 97/190 (51%), Gaps = 31/190 (16%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLP  I  L SL+ L L GCSNL+ F EI+ ++E L+   L+ET I ELPSSI +L  L 
Sbjct: 921  SLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHLRGLK 980

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES-------------- 582
             L+L NC  L ++ + + NL  L  L++  C KL  LP+ + +L+               
Sbjct: 981  SLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLME 1040

Query: 583  ------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
                        L +LN++E     IP+ + QL KL  L + +C  L+ + ELP     I
Sbjct: 1041 EEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCKLRTLLINHCPMLEVIGELPSSLGWI 1100

Query: 630  HARHCTSLKT 639
             A  C SL+T
Sbjct: 1101 EAHGCPSLET 1110



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 27/169 (15%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           LP+ I  L+SL+ L +  CS  ++FPEI  N   +++L L++TAI+ELP+SIG+L+ L  
Sbjct: 710 LPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEI 769

Query: 538 LDLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           L L  C                       SG+K +   +  L+SL  LNLS C   EK P
Sbjct: 770 LSLEKCLKFEKFSDVFTNMGRLRELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFP 829

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           E  GN++ L+ L+L     +++P+S+ +L  L  L L  C  L+  PE+
Sbjct: 830 EIQGNMKCLKELSLENTAIKELPNSIGRLQALESLTLSGCSNLERFPEI 878


>gi|356569977|ref|XP_003553169.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 833

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 281/698 (40%), Positives = 400/698 (57%), Gaps = 77/698 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           +ASSSSS +M+   K+DVFLSFRG+D R NF SHL  AL ++K+ET+ID+ L +G+EISP
Sbjct: 5   VASSSSSSSMLSPKKYDVFLSFRGEDTRRNFTSHLYEALKQKKVETYIDEHLEKGDEISP 64

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L  AIE S +SIV+FS+ YASS+WCL EL+KIL+ K   GQIV+PVFY +DPSD     
Sbjct: 65  ALIKAIEDSHVSIVVFSKNYASSKWCLVELIKILDCKKDRGQIVIPVFYEIDPSDVRKQT 124

Query: 117 -----GYCPSLG------W---------MGIFDIPT--SESVLIEGNVNDISKKLSDLFP 154
                 +    G      W         +  +D  T  ++  L++  V D+ +KL   + 
Sbjct: 125 GSYEQAFAKHEGEPSCNKWKTALTEAANLAGWDSRTYRTDPELLKDIVADVLQKLPPRYQ 184

Query: 155 SDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
           +  K  LVG+E   K IES L  G TE  T+GIWG+GGIGKT +A+ +Y  +S  FEGS 
Sbjct: 185 NQRKG-LVGIEEHCKHIESLLKIGPTEVRTLGIWGMGGIGKTALATTLYDKLSHEFEGSS 243

Query: 215 FMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSR 274
           F+ N+ ++S+K+    +   N +   L   K LIV  D+   + ++ L    D   PGSR
Sbjct: 244 FLSNVNEKSDKLEN--HCFGNSDMSTLRGKKALIVLDDVATSEHLEKLKVDYDFLEPGSR 301

Query: 275 VIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIK 334
           VI+TTR+ ++L  +       +++VKELS + S+ LF    FG+  P  G+ +LS  V+ 
Sbjct: 302 VIVTTRNREILGPN-----DEIYQVKELSSHHSVQLFCLTVFGEKQPKEGYEDLSERVLS 356

Query: 335 YANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLD 394
           Y  G+PLAL+V+G+ L+  S+E WES + KL+++  M+I  VLK+SYDGLD  +++IFLD
Sbjct: 357 YCKGIPLALKVMGASLRRKSKEAWESELRKLQKISSMEIHTVLKLSYDGLDHSQKDIFLD 416

Query: 395 TACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVR 453
            ACFFKG ++  V   LDA  F A  GI  L+ K+L+TIS  N I MHDL+QEMG EIVR
Sbjct: 417 IACFFKGRERDWVTRVLDAFDFFAASGIEVLLDKALITISEGNHIEMHDLIQEMGWEIVR 476

Query: 454 QESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKEL---------YLGGCSNL 502
           QE IKDPG++SRLW  E++  +L  N  T +  GI L SL++L         +L   +NL
Sbjct: 477 QECIKDPGRQSRLWRQEEVQNILKYNRGTDVVEGIIL-SLRKLTEALRLSFDFLAKMTNL 535

Query: 503 KRFPEISCNIEDLDLK---ETAIEELPSSIGNLSR----LVDLDLTNCSGLKSVSSRLCN 555
            RF +     +D   K    T  E LP  +  L      L  L L  C+           
Sbjct: 536 -RFLQFYDGWDDYGSKVPVPTGFESLPDKLRYLHWEGFCLESLPLNFCA----------- 583

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNC 614
            + L  L +    KL+KL + + NL +L+ + L   KD  ++P     LSK   L + N 
Sbjct: 584 -EQLVELYMPFS-KLKKLWDGVQNLVNLKIIGLQGSKDLIEVPD----LSKAEKLEIVNL 637

Query: 615 KRLQSLPELPCGSS----IHARHCTSLKTLSNSSTLLT 648
               SL +L   S     ++A++C+SLK  S +S  +T
Sbjct: 638 SFCVSLLQLHVYSKSLQGLNAKNCSSLKEFSVTSEEIT 675



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 39/72 (54%)

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV 549
           SL+ L    CS+LK F   S  I +L+L +TAI ELP SI    +L  L L  C  LK  
Sbjct: 652 SLQGLNAKNCSSLKEFSVTSEEITELNLADTAICELPPSIWQKKKLAFLVLNGCKNLKFF 711

Query: 550 SSRLCNLKSLRR 561
            + + +L S +R
Sbjct: 712 GNEIVHLLSSKR 723


>gi|359493402|ref|XP_002279700.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1186

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 271/704 (38%), Positives = 392/704 (55%), Gaps = 73/704 (10%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VFLSFRG+D R+NF  HL   L R  I+TF DD+L RG EI   L   IE S+IS+V+F
Sbjct: 22  EVFLSFRGEDTRNNFTDHLFVNLGRMGIKTFRDDQLERGEEIKSELLKTIEESRISVVVF 81

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-IFDI----- 130
           S+ YA S+WCL+EL KI+E + +  Q+V PVFY VDP D       G  G  F I     
Sbjct: 82  SKTYAHSKWCLDELAKIMECREEMEQMVFPVFYHVDPCDVR--KQTGSFGEAFSIHERNV 139

Query: 131 ----------PTSESVLIEG-NVND------ISKKLSDLFPSDN-------KDQLVGVES 166
                       +E+  I G +VND      I + ++ +F            D +VG++ 
Sbjct: 140 DAKKVQRWRDSLTEASNISGFHVNDGYESKHIKEIINQIFKRSMNSKLLHINDDIVGMDF 199

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK- 225
            +KE++S L S   +   VGI+G GGIGKTTIA  +Y+ I   F G+ F+Q++R+   K 
Sbjct: 200 RLKELKSLLSSDLNDTRVVGIYGTGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKG 259

Query: 226 -------------VGG---LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
                        VG     +NI+  +N  + RL   KVLIV  D+  L+Q++ + G   
Sbjct: 260 CQLQLQQQLLHDTVGNDEEFSNINKGINIIKDRLGSKKVLIVIDDVDRLQQLESVAGSPK 319

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F PGS +IITTR+  LL  + G  + H  +  EL Y ++L LFS++AF QN P   +++
Sbjct: 320 WFGPGSTIIITTRNQHLLVEY-GVTISH--KATELHYEEALQLFSQHAFKQNVPKEDYVD 376

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LSN +++YA G+PLAL+VLGS L+GM+ +EW+SA +KLK+ P  +I   L++S+DGLD  
Sbjct: 377 LSNCMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKLKKNPMKEINDALRISFDGLDPS 436

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           ++ +FLD ACFFKG  +  V   LD C       I  L  + LVTI NN I MHDL+QEM
Sbjct: 437 QKEVFLDIACFFKGECKDFVSRILDGCNLFVTCNIRVLCDRCLVTILNNVIQMHDLIQEM 496

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGINLDSLKELYLGGCSNLKRF 505
           G  I+R+E + DP K SRLW  +DIY   ++   L    GI+L + K+L       + +F
Sbjct: 497 GWAIIREECLGDPCKWSRLWDVDDIYDAFSKQERLEELKGIDLSNSKQLV-----KMPKF 551

Query: 506 PEISCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
             +S N+E L+L+   ++ EL  SIG+L  L  L+L  C  L+S  S +   +SL  L L
Sbjct: 552 SSMS-NLERLNLEGCISLRELHPSIGDLKSLTYLNLGGCEQLRSFLSSM-KFESLEVLYL 609

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE-- 622
           + C  L+K PE  GN+E L+ L L +   + +PSS+  L+ L  L L  C   +  PE  
Sbjct: 610 NCCPNLKKFPEIHGNMECLKELYLNKSGIQALPSSIVYLASLEVLNLSYCSNFKKFPEIH 669

Query: 623 --LPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
             + C   ++    + ++ L +S   L       ++ N S+CSN
Sbjct: 670 GNMECLKELYFNR-SGIQELPSSIVYLAS----LEVLNLSDCSN 708



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/185 (44%), Positives = 112/185 (60%), Gaps = 11/185 (5%)

Query: 482  LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
            LP GI  L +L+ L L GCSNL+RFPEI  N+ +L    L ETAI  LP S+G+L+RL  
Sbjct: 900  LPNGIGRLQALEILDLSGCSNLERFPEIQKNMGNLWGLFLDETAIRGLPYSVGHLTRLER 959

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            LDL NC  LKS+ + +C LKSL+ L+L+GC  LE   E   ++E LE L L E    ++P
Sbjct: 960  LDLENCRNLKSLPNSICGLKSLKGLSLNGCSNLEAFLEITEDMEQLEGLFLCETGISELP 1019

Query: 598  SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSN---SSTLLTRS 650
            SS++ L  L  L L NC+ L +LP     L C +S+H R+C  L  L +   S   ++ S
Sbjct: 1020 SSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSQQCISCS 1079

Query: 651  SKHWD 655
            S+ +D
Sbjct: 1080 SERYD 1084



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 4/147 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           +LP+ I  L SL+ L L  CSN K+FPEI  N+E   +L    + I+ELPSSI  L+ L 
Sbjct: 640 ALPSSIVYLASLEVLNLSYCSNFKKFPEIHGNMECLKELYFNRSGIQELPSSIVYLASLE 699

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L++CS  +       N+K LR L L  C K EK P+    +  L  L+L E   +++
Sbjct: 700 VLNLSDCSNFEKFPEIHGNMKFLRELYLERCSKFEKFPDTFTYMGHLRGLHLRESGIKEL 759

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           PSS+  L  L  L L  C + +  PE+
Sbjct: 760 PSSIGYLESLEILDLSCCSKFEKFPEI 786



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 28/149 (18%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  I  L+SL+EL L  CSN ++FPEI  N++ L    L++TAI+ELP+ IG L     
Sbjct: 853 LPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAIKELPNGIGRL----- 907

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
                              ++L  L+LSGC  LE+ PE   N+ +L  L L E     +P
Sbjct: 908 -------------------QALEILDLSGCSNLERFPEIQKNMGNLWGLFLDETAIRGLP 948

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
            S+  L++L  L L+NC+ L+SLP   CG
Sbjct: 949 YSVGHLTRLERLDLENCRNLKSLPNSICG 977



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 33/207 (15%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
           N+  L+ELYL  CS  ++FP+      ++  L L+E+ I+ELPSSIG L  L  LDL+ C
Sbjct: 718 NMKFLRELYLERCSKFEKFPDTFTYMGHLRGLHLRESGIKELPSSIGYLESLEILDLSCC 777

Query: 544 S-----------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
           S                        +K + + + +L SL  L+L  C K EK  +   N+
Sbjct: 778 SKFEKFPEIQGNMKCLLNLFLDETAIKELPNSIGSLTSLEMLSLRECSKFEKFSDVFTNM 837

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC---TSL 637
             L  L L     +++P S+  L  L +L L+ C   +  PE+          C   T++
Sbjct: 838 GRLRELCLYGSGIKELPGSIGYLESLEELNLRYCSNFEKFPEIQGNMKCLKMLCLEDTAI 897

Query: 638 KTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           K L N    L    +  +I + S CSN
Sbjct: 898 KELPNGIGRL----QALEILDLSGCSN 920


>gi|255555357|ref|XP_002518715.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542096|gb|EEF43640.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1094

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 278/700 (39%), Positives = 388/700 (55%), Gaps = 101/700 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R+NF SHL+AAL  +KI TFIDD L RGNEISPSL  AIE SKIS+V
Sbjct: 22  KYDVFLSFRGEDTRYNFTSHLHAALNGKKIPTFIDDDLERGNEISPSLLKAIEESKISVV 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           I S+ Y SS+WCL ELVKILE     GQ+V+PVFY VDPS             A +  SL
Sbjct: 82  IISQDYPSSKWCLEELVKILECMKNRGQMVIPVFYRVDPSHVRNQTGSFEDVFARHEESL 141

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW      P +E+V  +  +  I KKL+ + P+     L
Sbjct: 142 SVSKEKVQSWRAALKEVANLSGWHSTSTRPEAEAV--KEIIEVIVKKLNQMSPNCYSRGL 199

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ES I+EIES L   S+    VGIWG+GG+GKTT+A AIY  I+  FE  YF+ N R+
Sbjct: 200 VGMESRIQEIESLLCLRSSNVRIVGIWGMGGLGKTTLARAIYDRIAPQFEICYFLSNARE 259

Query: 222 ESEKVG----------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQID--LLI 263
           + ++                     N+  +F + RL R KVLIV  D  D  Q+   LL 
Sbjct: 260 QLQRCTLSELQNQLFSTLLEEQSTLNLQRSFIKDRLCRKKVLIVIDDADDSTQLQELLLE 319

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
              D F  GSR+IIT+RD Q+L+N    ++   + +++L  +++L LFS  AF Q++P  
Sbjct: 320 SEPDYFGSGSRIIITSRDKQVLRNIARDKI---YAMQKLKKHEALQLFSLKAFKQDNPTC 376

Query: 324 GFLEL-SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
               L +  V+KYA G PLAL VLGS L G  E++W+SA+ +L+R P+  I  VL++SYD
Sbjct: 377 RHCRLQAERVVKYAKGNPLALTVLGSALFGKREKDWKSALERLERNPNKKIDDVLRISYD 436

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN--KITM 440
           GLD EE++IFLD ACFF+G D+  V   LD    SA   IS L+ +S++ +S++  K+ +
Sbjct: 437 GLDSEERSIFLDIACFFRGQDRDFVTKTLDGYYGSAHSVISTLIDRSVIMLSSDSSKLDL 496

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLKEL---- 494
           HDLLQEMG +IV +ES K+P  RSRLW PED+  VLNEN  T    GI+LD  K      
Sbjct: 497 HDLLQEMGRKIVFEES-KNPENRSRLWTPEDVCYVLNENRGTEAIEGISLDKSKATSEIR 555

Query: 495 ----------------YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL------ 532
                           +     +  R P    + + L +    ++ LP+ + +L      
Sbjct: 556 LKPDAFSRMCRLRFLKFYKSPGDFYRSPGDRHSKDKLQISRDGLQSLPNELRHLYWIDFP 615

Query: 533 ----------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
                       LV L L N S +K + +   NL  L+ ++LSG   L  +P ++     
Sbjct: 616 MKSLPPSFNPENLVVLHLRN-SKVKKLWTGTQNLVKLKEIDLSGSKYLIGIP-DLSKAIY 673

Query: 583 LEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +E ++L++ D  E++ SS++ L+KL  L L +C +L+ LP
Sbjct: 674 IEKIDLSDCDNLEEVHSSIQYLNKLEFLNLWHCNKLRRLP 713



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 101/207 (48%), Gaps = 40/207 (19%)

Query: 466 LWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCN-IEDLDLKETAIEE 524
           LWH        N+   LP  I+   LK L LG  + +KR PE   N +ED+ L   AI+ 
Sbjct: 703 LWH-------CNKLRRLPRRIDSKVLKVLKLGS-TRVKRCPEFQGNQLEDVFLYCPAIKN 754

Query: 525 LPS---SIGNLSRLVDL------------------------DLTNCSGLKSVSSRLCNLK 557
           +     SI N SRLV L                        DL +CS L+S    L  + 
Sbjct: 755 VTLTVLSILNSSRLVHLFVYRCRRLSILPSSFYKLKSLKSLDLLHCSKLESFPEILEPMY 814

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           ++ ++++S C  L+  P  I NL SL YLNLA    +++PSS++ LS+L  L L++CK L
Sbjct: 815 NIFKIDMSYCRNLKSFPNSISNLISLTYLNLAGTAIKQMPSSIEHLSQLDFLDLKDCKYL 874

Query: 618 QSLP----ELPCGSSIHARHCTSLKTL 640
            SLP    ELP    ++   C SL +L
Sbjct: 875 DSLPVSIRELPQLEEMYLTSCESLHSL 901



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)

Query: 496 LGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
           +  C NLK FP    N+     L+L  TAI+++PSSI +LS+L  LDL +C  L S+   
Sbjct: 821 MSYCRNLKSFPNSISNLISLTYLNLAGTAIKQMPSSIEHLSQLDFLDLKDCKYLDSLPVS 880

Query: 553 LCNLKSLRRLNLSGCLKLEKLPE--------EIGNLESLE----YLNLAEKDFEKIPSSM 600
           +  L  L  + L+ C  L  LPE           N +SLE    Y NL E  F       
Sbjct: 881 IRELPQLEEMYLTSCESLHSLPELPSSLKKLRAENCKSLERVTSYKNLGEATFANCLRLD 940

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTL 646
           ++  +++DLR+  C   +     P GS +    C S +++ +S T+
Sbjct: 941 QKSFQITDLRVPECIYKERYLLYP-GSEVPG--CFSSQSMGSSVTM 983


>gi|359486075|ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/539 (43%), Positives = 325/539 (60%), Gaps = 61/539 (11%)

Query: 13  HP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           HP K++VFLSFRG+D R +F  HL+ AL R  I TFIDD+L RG +IS +L  AIE S+ 
Sbjct: 17  HPRKYEVFLSFRGEDTRKSFTDHLHEALHRCGINTFIDDQLRRGEQISSALLQAIEESRF 76

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPS----- 121
           SI+IFSE YASS WCL+EL KILE     G  V PVFY VDPS        Y  +     
Sbjct: 77  SIIIFSEHYASSSWCLDELTKILECVKVGGHTVFPVFYNVDPSHVRKQTGSYGVAFTKHE 136

Query: 122 ----------LGWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                     L W     + +           ES +I+  V+ I  +L+D   S N + L
Sbjct: 137 KVYRDNMEKVLKWREALTVASGLSGWDSRDRHESKVIKEIVSKIWNELNDA-SSCNMEAL 195

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S I+ + S L  GS +   VGIWG+ GIGKTTIA A+Y  I + FEG  F+ N+R+
Sbjct: 196 VGMDSHIQNMVSLLCIGSDDVRMVGIWGMAGIGKTTIAEAVYQKICTQFEGCCFLSNVRE 255

Query: 222 ESEK----------------VGGLA----NIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           +S+K                 G L     N  +N  ++ L  M+VLIV  D+   +Q+++
Sbjct: 256 KSQKNDPAVIQMELLSQVFWEGNLNTRIFNRGINAIKKTLHSMRVLIVLDDVDRPQQLEV 315

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  + F PGSR+IITTR+  LL          ++EVKEL+ +++  LF ++AF    P
Sbjct: 316 LAGNHNWFGPGSRIIITTREKHLLDEKV-----EIYEVKELNKDEARRLFYQHAFKYKPP 370

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           A  F++L +  + Y  G+PLAL++LG +L   S++EWES + KL+R+P+ +IQ VL++S+
Sbjct: 371 AGDFVQLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISF 430

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGLDD +++IF D ACFFKG D+  V+  L +C F  +IGI  L+ KSLVTIS NK+ MH
Sbjct: 431 DGLDDNQKDIFFDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMH 490

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYL 496
           DL+QEMG EIVRQES+KDPGKRSRLW  +D+  +L  NT         +NL +LKEL+ 
Sbjct: 491 DLIQEMGWEIVRQESMKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTLKELHF 549



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/164 (44%), Positives = 102/164 (62%), Gaps = 10/164 (6%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+L+SL+ L L GCS LK+ PE+     N+ +L LK TAI+ LP SI  L+ L  
Sbjct: 710 SFLSSIHLESLQILTLSGCSKLKKLPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLAL 769

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            +L  C  L+S+   +  LKSL+ L LS CL+L+KLPE   N+ESL+ L L +    ++P
Sbjct: 770 FNLEECKSLESLPGCIFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELP 829

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           SS++ L+ L  L+L+NCKRL SLPE  C         TSL+TL+
Sbjct: 830 SSIEHLNGLVLLKLKNCKRLASLPESIC-------KLTSLQTLT 866



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 84/139 (60%), Gaps = 4/139 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP  I  L SLK L L  C  LK+ PEI  N+E L    L +T + ELPSSI +L+ LV
Sbjct: 780 SLPGCIFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLV 839

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L L NC  L S+   +C L SL+ L LSGC +L+KLP+++G+L+ L  L       +++
Sbjct: 840 LLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEV 899

Query: 597 PSSMKQLSKLSDLRLQNCK 615
           PSS+  L++L  L L  CK
Sbjct: 900 PSSITLLTRLQVLSLAGCK 918



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 109/208 (52%), Gaps = 27/208 (12%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
             SLP  I  L SL+ L L GCS LK+ P+    + C ++ L    + I+E+PSSI  L+R
Sbjct: 850  ASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLK-LKANGSGIQEVPSSITLLTR 908

Query: 535  LVDLDLTNCSGLKSVS-----------------SRLCNLKSLRRLNLSGCLKLE-KLPEE 576
            L  L L  C G  S S                 S L  L SL++LNLS    LE  LP +
Sbjct: 909  LQVLSLAGCKGGGSKSRNLALSLRASPTDGLRLSSLTVLHSLKKLNLSDRNLLEGALPSD 968

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
            + +L  LE L+L+  +F  +P+S+ +L  L  L +++CK LQSLPELP     + A  CT
Sbjct: 969  LSSLSWLECLDLSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCT 1028

Query: 636  SLKTLSNSSTLLTRSSKHWDI-FNFSNC 662
            SL+T S  S+      K  D  F FSNC
Sbjct: 1029 SLETFSYPSSAYPL-RKFGDFNFEFSNC 1055



 Score = 39.3 bits (90), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           LRR+ L GC  L K+   IG L+ L +LNL   K+ +   SS+  L  L  L L  C +L
Sbjct: 673 LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFLSSI-HLESLQILTLSGCSKL 731

Query: 618 QSLPEL 623
           + LPE+
Sbjct: 732 KKLPEV 737


>gi|359493489|ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 284/731 (38%), Positives = 405/731 (55%), Gaps = 109/731 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+D FLSFRG+D R NF +HL+AALC++ I TF D+ L RG +IS  L  AIE S+ SI+
Sbjct: 21  KYDAFLSFRGEDTRKNFTTHLHAALCQKGINTFKDNLLLRGEKISAGLLQAIEESRFSII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------ 123
           IFSE YASS WCL+EL KILE   + G   +PVFY VDPS        +  +        
Sbjct: 81  IFSENYASSSWCLDELTKILECVEEGGHTALPVFYNVDPSHVRKQKGCFADAFAEHEQVY 140

Query: 124 ---------WM-GIFDIPT---------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W   + ++ T          ES +IE  V  I  +  D F S N D LVG+
Sbjct: 141 REKMEKVVKWRKALTEVATISGWDSRDRDESEVIEEIVTRILNEPIDAF-SSNVDALVGM 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S ++++ S L  GS +   VGIWG+ GIGKTTIA AIY  I + F+G  F++++R++S+
Sbjct: 200 DSRMEDLLSLLCIGSNDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKDVREDSQ 259

Query: 225 K--------------VGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
           +              +GG+ N++  +NF + RL   KVLIV  ++   ++++ L+G  D 
Sbjct: 260 RHGLTYLQETLLSRVLGGINNLNRGINFIKARLHSKKVLIVLDNVVHRQELEALVGSHDW 319

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F PGSR+IITTR+ +LL       +  ++EV++L Y+++L LF + AF   HP   F++L
Sbjct: 320 FGPGSRIIITTREKRLLIEQE---MDAIYEVEKLEYDEALKLFCQYAFRYKHPTEDFMQL 376

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
            +  + Y   +PLAL+VLGS L   S  EW+S ++K  + P+ ++  VLK S+DGLDD E
Sbjct: 377 CHHAVDYTGSLPLALKVLGSCLYRKSIHEWKSELDKFNQFPNKEVLNVLKTSFDGLDDNE 436

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           +N+FLD A F+KG D+  V+  LD     ++IG   LV KSL+TIS+NK+ MHDLLQEMG
Sbjct: 437 KNMFLDIAFFYKGEDKDFVIEVLDNFFPVSEIG--NLVDKSLITISDNKLYMHDLLQEMG 494

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI--NLDSLKELYLGGCSNLK- 503
            EIVRQESIKDPGKRSRL   EDI+ VL  N+ T    G+  +L + KEL L   +  K 
Sbjct: 495 WEIVRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKELNLSVDAFAKM 554

Query: 504 -----------------RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
                            +FP  S N+  L      ++ LPS+  +  +LV+L++  C  L
Sbjct: 555 NKLRLLRFYNLHLSRDFKFP--SNNLRSLHWHGYPLKSLPSNF-HPEKLVELNM--CYSL 609

Query: 547 -------KSVSSRLCNLK-----------------SLRRLNLSGCLKLEKLPEEIGNLES 582
                  K    +L  +K                  LRR+ L+GC  L KL   IG L+ 
Sbjct: 610 LKQLWEGKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKE 669

Query: 583 LEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSL 637
           L +LNL      E +P S+ +L  L  L L  C +L+ LP+    L C   ++    T +
Sbjct: 670 LIFLNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDG-TGI 728

Query: 638 KTLSNSSTLLT 648
           K +++S  LLT
Sbjct: 729 KEVTSSINLLT 739



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 111/206 (53%), Gaps = 27/206 (13%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRL 535
           +LP  I  L SL+ L L GCS LK+ P+    + C +E L++  T I+E+ SSI  L+ L
Sbjct: 683 NLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVE-LNVDGTGIKEVTSSINLLTNL 741

Query: 536 VDLDLTNCSGLKSVSSRLCNLKS----------------LRRLNLSGCLKLEKLPEEIGN 579
             L L  C G  S S  L + +S                L+ LNLS C  LE       +
Sbjct: 742 EALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPSDLS 801

Query: 580 LESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSL 637
             S       +K+ F  +P+S+ +LS+L  L L++CK L+SLPELP     ++A  CTSL
Sbjct: 802 SLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEYLNAHSCTSL 861

Query: 638 KTLSNSSTLLTRSSKHWDI-FNFSNC 662
           +TLS SS+  T +SK  D+ FNF+NC
Sbjct: 862 ETLSCSSS--TYTSKLGDLRFNFTNC 885



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 60/96 (62%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           T++ +L  SIG L  L+ L+L  CS L+++   +C L SL+ L LSGC KL+KLP+++G 
Sbjct: 655 TSLVKLHPSIGALKELIFLNLEGCSKLENLPQSICELISLQTLTLSGCSKLKKLPDDLGR 714

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           L+ L  LN+     +++ SS+  L+ L  L L  CK
Sbjct: 715 LQCLVELNVDGTGIKEVTSSINLLTNLEALSLAGCK 750


>gi|357471111|ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355506895|gb|AES88037.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1264

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 287/720 (39%), Positives = 402/720 (55%), Gaps = 97/720 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF+SFRG+D R NF SHL+AALCR K++T+ID  L +G+ IS +L  AI+ S +SIV
Sbjct: 16  KNDVFISFRGEDTRSNFTSHLHAALCRTKVKTYIDYNLKKGDYISETLVKAIQDSYVSIV 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL------- 122
           +FSE YASS WCL+EL  +++       +VVPVFY VDPS        Y  +        
Sbjct: 76  VFSENYASSTWCLDELTHMMKCLKNNQIVVVPVFYNVDPSHVRKQSGSYMVAFEKHVCNL 135

Query: 123 -------GWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                   W       TS           ES L+E  V D+ +KL   +PS++K  LVG+
Sbjct: 136 NHFNKVNDWREALAQATSLAGWDSRKYMLESELVEDIVQDVLQKLHCKYPSESKG-LVGI 194

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +     +ES +  GS E   +G+WG+GGIGKTTIA+AI+   SS FEG  F++NI DESE
Sbjct: 195 DKHYAHLESFMSIGSKEVGMIGMWGMGGIGKTTIAAAIFDLFSSQFEGCCFLENIGDESE 254

Query: 225 KVG---------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           + G                     G   I  N+ + RLS  KVLIV  D+  ++Q+D L+
Sbjct: 255 RHGLNFLHNKLLTMLLEEKENVHVGTVRIGFNYSKSRLSHKKVLIVLDDVRTIEQLDFLV 314

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           G      PGSRVI+T RD    K+    R   ++EVK L++++SL LFS +AF +  P  
Sbjct: 315 GAHTCLGPGSRVIVTARD----KHALIERAHEIYEVKPLNFHESLQLFSLSAFKKVCPDI 370

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           G+ +LS  V+ YA G+PLAL+VLGS     S+E W+S + KLK++P  +IQ +L++SYDG
Sbjct: 371 GYQQLSESVVNYAGGIPLALKVLGSLFSYKSKEIWQSTMTKLKKIPCREIQNILRLSYDG 430

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHD 442
           LDD E+ IFLD ACF  G D+  V   LDAC F A  G+  L+ K+L+T S NN++ MH 
Sbjct: 431 LDDTEKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITFSNNNQVQMHA 490

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD--SLKELYLGG 498
           L+QEMG EIVRQES KDPG+RSRL+  E++Y VL  N  TS   GI+LD   +K++ L  
Sbjct: 491 LIQEMGREIVRQESTKDPGRRSRLYDHEEVYDVLKNNMGTSAIEGISLDVSQIKDMNLSS 550

Query: 499 ---------------------CS-----NLKRFPEISCNIEDLDLKETAIEELPSSIGNL 532
                                CS      LK F   S  +  L      ++ LPSS    
Sbjct: 551 DIFVKMINLRFLKFYSRSGERCSVSLPAGLKSF---SNKLRYLHWSAYPLKSLPSSFSP- 606

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-K 591
            +LV+L + N S +K +   + +L +L++++LS C  L +LP +     +L+ +NL+   
Sbjct: 607 EKLVELYMPN-SRVKRLWEGVQDLTNLKKMDLSCCENLIELP-DFSMASNLQTVNLSRCV 664

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQS-LPELPCGS--SIHARHCTSLKTLSNSSTLLT 648
               + +S+  L KL +L L  CK L+S L   P  S   +    C+SLK  S +S  +T
Sbjct: 665 RLRHVHASILSLQKLVNLNLVWCKNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSEEMT 724



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 104/209 (49%), Gaps = 27/209 (12%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SL +   L+SL+ L L GCS+LK F   S  +  LDL+ TAI ELP S+  L RL++L+L
Sbjct: 692 SLLSNTPLNSLRILELYGCSSLKEFSVTSEEMTYLDLRCTAINELPPSVKYLGRLMNLEL 751

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE--KLPEEIGNLESLEYL------NLAE-- 590
           ++C  L+++ +    LKSL RL LS C  L+   L      L SL YL      NL E  
Sbjct: 752 SSCVRLRNLPNEFSCLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGYLCLDNCCNLTELP 811

Query: 591 ----------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARH 633
                            + + IP S+K LS+L  L L  C  +Q LPELP    +    +
Sbjct: 812 HNISLLSSLYYLSLSGSNVKNIPKSIKHLSQLESLDLCKCMSIQYLPELPPSIEVLDVTN 871

Query: 634 CTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           CTSL+T+     +     +H    +F NC
Sbjct: 872 CTSLETVFTCPAIDELLQEHKVFISFKNC 900


>gi|357515077|ref|XP_003627827.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
 gi|355521849|gb|AET02303.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
          Length = 1266

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 287/720 (39%), Positives = 402/720 (55%), Gaps = 97/720 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF+SFRG+D R NF SHL+AALCR K++T+ID  L +G+ IS +L  AI+ S +SIV
Sbjct: 16  KNDVFISFRGEDTRSNFTSHLHAALCRTKVKTYIDYNLKKGDYISETLVKAIQDSYVSIV 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL------- 122
           +FSE YASS WCL+EL  +++       +VVPVFY VDPS        Y  +        
Sbjct: 76  VFSENYASSTWCLDELTHMMKCLKNNQIVVVPVFYNVDPSHVRKQSGSYMVAFEKHVCNL 135

Query: 123 -------GWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                   W       TS           ES L+E  V D+ +KL   +PS++K  LVG+
Sbjct: 136 NHFNKVNDWREALAQATSLAGWDSRKYMLESELVEDIVQDVLQKLHCKYPSESKG-LVGI 194

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +     +ES +  GS E   +G+WG+GGIGKTTIA+AI+   SS FEG  F++NI DESE
Sbjct: 195 DKHYAHLESFMSIGSKEVGMIGMWGMGGIGKTTIAAAIFDLFSSQFEGCCFLENIGDESE 254

Query: 225 KVG---------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           + G                     G   I  N+ + RLS  KVLIV  D+  ++Q+D L+
Sbjct: 255 RHGLNFLHNKLLTMLLEEKENVHVGTVRIGFNYSKSRLSHKKVLIVLDDVRTIEQLDFLV 314

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           G      PGSRVI+T RD    K+    R   ++EVK L++++SL LFS +AF +  P  
Sbjct: 315 GAHTCLGPGSRVIVTARD----KHALIERAHEIYEVKPLNFHESLQLFSLSAFKKVCPDI 370

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           G+ +LS  V+ YA G+PLAL+VLGS     S+E W+S + KLK++P  +IQ +L++SYDG
Sbjct: 371 GYQQLSESVVNYAGGIPLALKVLGSLFSYKSKEIWQSTMTKLKKIPCREIQNILRLSYDG 430

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHD 442
           LDD E+ IFLD ACF  G D+  V   LDAC F A  G+  L+ K+L+T S NN++ MH 
Sbjct: 431 LDDTEKEIFLDIACFLNGKDRQHVTRLLDACGFYAVPGLETLLEKALITFSNNNQVQMHA 490

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD--SLKELYLGG 498
           L+QEMG EIVRQES KDPG+RSRL+  E++Y VL  N  TS   GI+LD   +K++ L  
Sbjct: 491 LIQEMGREIVRQESTKDPGRRSRLYDHEEVYDVLKNNMGTSAIEGISLDVSQIKDMNLSS 550

Query: 499 ---------------------CS-----NLKRFPEISCNIEDLDLKETAIEELPSSIGNL 532
                                CS      LK F   S  +  L      ++ LPSS    
Sbjct: 551 DIFVKMINLRFLKFYSRSGERCSVSLPAGLKSF---SNKLRYLHWSAYPLKSLPSSFSP- 606

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-K 591
            +LV+L + N S +K +   + +L +L++++LS C  L +LP +     +L+ +NL+   
Sbjct: 607 EKLVELYMPN-SRVKRLWEGVQDLTNLKKMDLSCCENLIELP-DFSMASNLQTVNLSRCV 664

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQS-LPELPCGS--SIHARHCTSLKTLSNSSTLLT 648
               + +S+  L KL +L L  CK L+S L   P  S   +    C+SLK  S +S  +T
Sbjct: 665 RLRHVHASILSLQKLVNLNLVWCKNLKSLLSNTPLNSLRILELYGCSSLKEFSVTSEEMT 724



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 104/209 (49%), Gaps = 27/209 (12%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SL +   L+SL+ L L GCS+LK F   S  +  LDL+ TAI ELP S+  L RL++L+L
Sbjct: 692 SLLSNTPLNSLRILELYGCSSLKEFSVTSEEMTYLDLRCTAINELPPSVKYLGRLMNLEL 751

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE--KLPEEIGNLESLEYL------NLAE-- 590
           ++C  L+++ +    LKSL RL LS C  L+   L      L SL YL      NL E  
Sbjct: 752 SSCVRLRNLPNEFSCLKSLGRLVLSDCTLLDTSNLHLLFDGLRSLGYLCLDNCCNLTELP 811

Query: 591 ----------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARH 633
                            + + IP S+K LS+L  L L  C  +Q LPELP    +    +
Sbjct: 812 HNISLLSSLYYLSLSGSNVKNIPKSIKHLSQLESLDLCKCMSIQYLPELPPSIEVLDVTN 871

Query: 634 CTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           CTSL+T+     +     +H    +F NC
Sbjct: 872 CTSLETVFTCPAIDELLQEHKVFISFKNC 900


>gi|359493394|ref|XP_002279512.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1327

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 263/657 (40%), Positives = 372/657 (56%), Gaps = 60/657 (9%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VFLSFRG+D R+NF  HL   L    I+TF DD+L RG EI   L   IE S+ISIV+F
Sbjct: 21  EVFLSFRGEDTRNNFTDHLFVNLHGMGIKTFRDDQLERGEEIKSELLKTIEESRISIVVF 80

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLGWMGIF------- 128
           S+ YA S+WCL+EL KI+E + +  QIV PVFY VDP D      S G    F       
Sbjct: 81  SKNYAHSKWCLDELAKIMECREEMEQIVFPVFYHVDPCDVRKQTGSFGEAFSFHERNVDG 140

Query: 129 -------DIPTSESVLIEGNVND------ISKKLSDLFPSDNKDQLVGVESII------- 168
                  D  T  S L   +VND      I + ++ +F      +L+ + + I       
Sbjct: 141 KKVQRWRDSLTEASNLSGFHVNDGYESKHIKEIINQIFKRSMNSKLLHINNDIVEMDFRL 200

Query: 169 KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK--- 225
           KE++S L S   +   VGI+G GGIGKTTIA  +Y+ I   F G+ F+Q++R+   K   
Sbjct: 201 KELKSLLSSDLNDIRVVGIYGPGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKGCQ 260

Query: 226 -----------VGG---LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
                      VG     +NI+  +N  + RL   KVLIV  D+  L+Q++ ++G    F
Sbjct: 261 LQLQQQLLHDTVGNDVEFSNINKGINIIKSRLRSKKVLIVIDDVDRLQQLESVVGSPKWF 320

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
             GS +IITTRD  LL  + G  + H  +  EL Y ++L LFS++AF QN P   +++LS
Sbjct: 321 GLGSTIIITTRDQHLLVEY-GVTISH--KATELHYEEALQLFSQHAFKQNVPKEDYVDLS 377

Query: 330 NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQ 389
           N +++YA G+PLAL+VLGS L+GM+ +EW+SA +KLK+ P  +I  VL++S+DGLD  ++
Sbjct: 378 NCMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKLKKNPMKEINDVLRISFDGLDPSQK 437

Query: 390 NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG 449
            +FLD ACFFK   +Y V   LD C   A   I  L  + LVTI ++ I MHDL+QEMG 
Sbjct: 438 EVFLDIACFFKDECKYFVSRILDGCNLFATCNIRVLCDRCLVTILDSVIQMHDLIQEMGW 497

Query: 450 EIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEIS 509
            IVR+ES  DP K SRLW  +DI+   ++          + LK + L     L + P+ S
Sbjct: 498 AIVREESPGDPCKWSRLWDVDDIHDAFSKQE------RFEELKGIDLSNSKQLVKMPKFS 551

Query: 510 C--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
              N+E L+L+  T++ EL SSIG+L  L  L+L  C  L+S  S +   +SL  L L+ 
Sbjct: 552 SMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLGGCEQLRSFPSSM-KFESLEVLYLNC 610

Query: 567 CLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           C  L+K P+  GN+E L+ L L E   +++PSS+  L+ L  L L +C   +  PE+
Sbjct: 611 CPNLKKFPKIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSDCSNFEKFPEI 667



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 103/170 (60%), Gaps = 8/170 (4%)

Query: 482  LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
            LP  I  L +L  L L GCSNL+RFPEI  N+ +L    L ETAIE LP S+G+L+RL  
Sbjct: 852  LPNSIGRLQALGSLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDR 911

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            L+L NC  LKS+ + +C LKSL  L+L+GC  L+   E   ++E LE L L E    ++P
Sbjct: 912  LNLENCKNLKSLPNSICELKSLEGLSLNGCSNLKAFSEITEDMEQLERLFLCETGISELP 971

Query: 598  SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
            SS++ L  L  L L NC+ L +LP     L C +S+H R+C  L  L ++
Sbjct: 972  SSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDN 1021



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 8/175 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S P+ +  +SL+ LYL  C NLK+FP+I  N+E   +L L E+ I+ELPSSI  L+ L  
Sbjct: 593 SFPSSMKFESLEVLYLNCCPNLKKFPKIHGNMECLKELYLNESGIQELPSSIVYLASLEV 652

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L++CS  +       N+K LR L L GC K E  P+    +  L  L+L +   +++P
Sbjct: 653 LNLSDCSNFEKFPEIHGNMKFLRELYLEGCSKFENFPDTFTYMGHLRGLHLRKSGIKELP 712

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLT 648
           SS+  L  L  L +  C + +  PE    + C  +++ R  T+++ L NS   LT
Sbjct: 713 SSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRK-TAIQELPNSIGSLT 766



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 31/190 (16%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLP  I  L SL+ L L GCSNLK F EI+ ++E L+   L ET I ELPSSI +L  L 
Sbjct: 922  SLPNSICELKSLEGLSLNGCSNLKAFSEITEDMEQLERLFLCETGISELPSSIEHLRGLK 981

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES-------------- 582
             L+L NC  L ++ + + NL  L  L++  C KL  LP+ + +L+               
Sbjct: 982  SLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLME 1041

Query: 583  ------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
                        L +LN++E     IP+ + QL KL  L + +C  L+ + ELP     I
Sbjct: 1042 EEIPSDLWCLSLLVFLNISESRMRCIPAGITQLCKLRILLMNHCPMLEVIGELPSSLGWI 1101

Query: 630  HARHCTSLKT 639
             A  C SL+T
Sbjct: 1102 EAHGCPSLET 1111



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 91/169 (53%), Gaps = 27/169 (15%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           LP+ I  L+SL+ L +  CS  ++FPEI  N   +++L L++TAI+ELP+SIG+L+ L  
Sbjct: 711 LPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEI 770

Query: 538 LDLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           L L  C                       SG+K +   +  L+SL  LNLS C   EK P
Sbjct: 771 LSLEKCLKFEKFSDVFTNMGRLRELCLYRSGIKELPGSIGYLESLENLNLSYCSNFEKFP 830

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           E  GN++ L+ L+L     +K+P+S+ +L  L  L L  C  L+  PE+
Sbjct: 831 EIQGNMKCLKELSLDNTAIKKLPNSIGRLQALGSLTLSGCSNLERFPEI 879



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 86/168 (51%), Gaps = 32/168 (19%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           LP  I  L+SL+ L L  CSN ++FPEI  N   +++L L  TAI++LP+SIG L     
Sbjct: 805 LPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLDNTAIKKLPNSIGRL----- 859

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
                              ++L  L LSGC  LE+ PE   N+ +L  L L E   E +P
Sbjct: 860 -------------------QALGSLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLP 900

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLS 641
            S+  L++L  L L+NCK L+SLP    EL     +    C++LK  S
Sbjct: 901 YSVGHLTRLDRLNLENCKNLKSLPNSICELKSLEGLSLNGCSNLKAFS 948


>gi|359495250|ref|XP_002271616.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1427

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 276/708 (38%), Positives = 384/708 (54%), Gaps = 105/708 (14%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVFLSFRG+D R+NF  HL   L R  I TF DD+L RG EI   L   IE S+ISIV+F
Sbjct: 22  DVFLSFRGEDTRNNFTDHLFVNLHRMGINTFRDDQLERGEEIKSELLKTIEESRISIVVF 81

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------GYCPSLGWMGI-- 127
           S+ YA S+WCL+EL KI+E + +  QIV+PVFY VDPSD        G   S+    +  
Sbjct: 82  SKDYAQSKWCLDELAKIMECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVDE 141

Query: 128 ------FDIPTSESVLIEGNVND------ISKKLSDLFPSDN-------KDQLVGVESII 168
                  D  T  S L   +VND      I + +S +F            D +VG++  +
Sbjct: 142 KKVQRWKDSLTKASNLSGFHVNDGYESKHIKEIVSKIFKRSMNSTLLPINDDIVGMDFHL 201

Query: 169 KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK--- 225
           KE++S L S S + + VGI+G GGIGKTTIA  +Y+ I   F  + F+Q++R+   K   
Sbjct: 202 KELKSLLSSDSHDISVVGIYGTGGIGKTTIAKIVYNEIQYQFTSASFLQDVRETFNKRCQ 261

Query: 226 -----------VGG---LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
                      VG      NI+  ++  + RLS  KVLIV  D+ +L+Q++ + G    F
Sbjct: 262 LQLQQQLLHDTVGDDEEFRNINKGIDIIKARLSSKKVLIVIDDVDELEQLESVAGSPKWF 321

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
            PGS +IITTR+  LL  +  +     +E   L Y ++L LFSR+AF QN P   +++LS
Sbjct: 322 GPGSTIIITTRNRHLLVEYEATI---SYEATGLHYREALQLFSRHAFKQNDPKEDYVDLS 378

Query: 330 NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQ 389
           N +++YA G+PLAL+VLGS L+GM+ E+WESA+NKLK   +  I  VL++S DGLD  ++
Sbjct: 379 NCMVQYAQGLPLALKVLGSSLRGMTIEQWESALNKLKTNLNKKINDVLRISLDGLDYSQK 438

Query: 390 NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG 449
            +FLD ACFFKG  +  V   L  C+   KI I  L  + LVTI +N I MHDL+QEMG 
Sbjct: 439 EVFLDIACFFKGECEDFVSRILYDCKLDPKINIKNLHDRCLVTIRDNVIQMHDLIQEMGY 498

Query: 450 EIVRQESIKDPGKRSRLWHPEDIYQVLN-----ENT-----------------------S 481
            IVR+E  +DP K SRLW  +DIY   +     EN                        S
Sbjct: 499 AIVREECPRDPHKWSRLWDADDIYNAFSRREGMENIQTISLDLSRSKEIQFSTEVCTLRS 558

Query: 482 LPTG--------INLDS---------------LKELYLGGCSNLKRFPEISC--NIEDLD 516
           LP+         INL S               LK + L     L + PE S   N+E L+
Sbjct: 559 LPSSFCGEQLIEINLKSSNIKRLWKGNKRLEKLKGIDLSNSKQLVKMPEFSSMPNLERLN 618

Query: 517 LKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           L+  T++ EL SSIG+L +L  L+L  C  L+S  + +   +SL  L L+ C KL+K+P+
Sbjct: 619 LEGCTSLCELHSSIGDLKQLTYLNLRGCEQLQSFPTNM-KFESLEVLCLNQCRKLKKIPK 677

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            +GN+  L+ L L     +++P S+  L  L  L L NC + +  PE+
Sbjct: 678 ILGNMGHLKKLCLNGSGIKELPDSIGYLESLEILDLSNCSKFEKFPEI 725



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 94/176 (53%), Gaps = 9/176 (5%)

Query: 482  LPTGIN-LDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVD 537
            LP  I  L  L+ L L GCSNL+R PEI     N+  L L  TAI+ LP SI   + L  
Sbjct: 933  LPNSIGCLQDLEILDLDGCSNLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHH 992

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            L L NC  L+S+   +C LKSL+ L + GC  LE   E   ++E L+ L L E    ++P
Sbjct: 993  LTLENCRNLRSLPD-ICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELP 1051

Query: 598  SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLTR 649
            SS++ L  L  L L NCK L +LP     L C + +  R+CT L  L ++   L R
Sbjct: 1052 SSIEHLRGLDSLELINCKNLVALPISIGSLTCLTILRVRNCTKLHNLPDNLRGLRR 1107



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 30/204 (14%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
            SLP    L SLK L++ GCSNL+ F EI+ ++E L    L+ET I ELPSSI +L  L  
Sbjct: 1003 SLPDICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDS 1062

Query: 538  LDLTNCSGLK----SVSSRLC-----------------NLKSLRR----LNLSGCLKLE- 571
            L+L NC  L     S+ S  C                 NL+ LRR    L+L GC  +E 
Sbjct: 1063 LELINCKNLVALPISIGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLMEG 1122

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            ++P ++  L SLE L ++E     IP+ + QL KL  L + +C  L+ + ELP   + + 
Sbjct: 1123 EIPSDLWCLSSLESLYVSENHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYME 1182

Query: 631  ARHCTSLKTLSNSSTLLTRSSKHW 654
            AR C  L+T + SS L +   K++
Sbjct: 1183 ARGCPCLETETFSSPLWSSLLKYF 1206



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 28/172 (16%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
            LP  I ++ SL+ L L  CS  ++F ++  N+  L   +L+E+ I+ELP SIG L  L+ 
Sbjct: 839  LPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQ 898

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRL-----------------------NLSGCLKLEKLP 574
            LDL+NCS  +  S    N+K LR L                       +L GC  LE+LP
Sbjct: 899  LDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGCSNLERLP 958

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
            E   ++ +L  L+LA    + +P S++  + L  L L+NC+ L+SLP++ CG
Sbjct: 959  EIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLPDI-CG 1009



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 29/170 (17%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIG------- 530
           LP  I  L+SL+ L L  CS  ++FPEI  N   ++ L L ETAI+ELP+SIG       
Sbjct: 698 LPDSIGYLESLEILDLSNCSKFEKFPEIRGNMKCLKRLSLDETAIKELPNSIGSLTSLEL 757

Query: 531 -----------------NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
                            N+ RL+ L+L   SG+K +   +  L+ L +L+LS C K EK 
Sbjct: 758 LSLRKCSKFEKFSDVFTNMRRLLILNLRE-SGIKELPGSIGCLEFLLQLDLSYCSKFEKF 816

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           PE  GN++ L+ L+L E   +++P+S+  ++ L  L L+ C + +   ++
Sbjct: 817 PEIRGNMKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDV 866



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 35/196 (17%)

Query: 499 CSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
           CS  ++F ++  N+  L   +L+E+ I+ELP SIG L  L+ LDL+ CS  +       N
Sbjct: 763 CSKFEKFSDVFTNMRRLLILNLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGN 822

Query: 556 LKSLRRLNLS-----------------------GCLKLEKLPEEIGNLESLEYLNLAEKD 592
           +K L+RL+L                         C K EK  +   N+  L+ LNL E  
Sbjct: 823 MKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRESG 882

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS----IHARHCTSLKTLSNSSTLLT 648
            +++P S+  L  L  L L NC + +   E+         ++ +H T++K L NS   L 
Sbjct: 883 IKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKH-TTIKELPNSIGCL- 940

Query: 649 RSSKHWDIFNFSNCSN 664
              +  +I +   CSN
Sbjct: 941 ---QDLEILDLDGCSN 953



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 27/146 (18%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           S PT +  +SL+ L L  C  LK+ P+I  N   ++ L L  + I+ELP SIG L  L  
Sbjct: 651 SFPTNMKFESLEVLCLNQCRKLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEI 710

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL+NCS                        K EK PE  GN++ L+ L+L E   +++P
Sbjct: 711 LDLSNCS------------------------KFEKFPEIRGNMKCLKRLSLDETAIKELP 746

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +S+  L+ L  L L+ C + +   ++
Sbjct: 747 NSIGSLTSLELLSLRKCSKFEKFSDV 772


>gi|224145021|ref|XP_002325498.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862373|gb|EEE99879.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1561

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 292/739 (39%), Positives = 406/739 (54%), Gaps = 110/739 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSS+        K+DVFLSFRGKD R+NF SHL   L R+KI+TFIDD+L RG EI+P
Sbjct: 1   MASSSAVARKW---KYDVFLSFRGKDTRNNFTSHLCKDLRRQKIKTFIDDRLERGEEITP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG--- 117
           +L   IE S++SIVIFSE YASS WCL+ELVKILE K  YGQIV+PVFY VDPSD     
Sbjct: 58  ALLKTIEESRVSIVIFSENYASSPWCLDELVKILECKETYGQIVLPVFYHVDPSDVDEQT 117

Query: 118 -----------------------------YCPSL-GWMGIFDIPTSESVLIEGNVNDISK 147
                                        Y  S+ GW     + + E+ LI   V  I K
Sbjct: 118 GSFGNAFSELEKNFKGKMGKVPRWRADLTYAASISGWDS--QVTSPEAKLISEVVQTICK 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           +L+   P   +D LVGV+S I++I   L   +++   +GIWG+GGIGKTTIA A + +IS
Sbjct: 176 RLNRASPCKLRD-LVGVDSRIEKINKLLSIVASDVRIIGIWGMGGIGKTTIAEAFFYSIS 234

Query: 208 SHFEGSYFMQNIRDESEKVG--------------------GLANIHLNFERRRLSRMKVL 247
           S +EG +F+ NIR ESEK                      G  +I   F R RL + KVL
Sbjct: 235 SQYEGCHFLPNIRQESEKGPLSDLRDDLLSKLLEEENLRVGTPHIGPTFIRDRLCQKKVL 294

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVP----GSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
           +V  D+ D +Q   LI      VP    GS V++T+RD Q+LKN        ++EV+EL+
Sbjct: 295 LVLDDVNDARQFQQLIE-----VPLIGAGSVVVVTSRDKQVLKN----VADEIYEVEELN 345

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            +++L LFS  AF  NHP   ++ELS   I YA G PLAL+VLGS+L       WES +N
Sbjct: 346 SHEALELFSLIAFKGNHPPKSYMELSITAINYAKGNPLALRVLGSFLIRRERHFWESQLN 405

Query: 364 KLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
            ++  P ++I  +L++ +D L D+  ++IFLD ACFF+G+    V   LD C F   IG 
Sbjct: 406 NIESFPELNICDLLRIGFDALRDNNTKSIFLDIACFFRGHQVDFVKRILDGCGFKTDIGF 465

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENT 480
           S L+ + L+  S++K+ MHDLLQEM  E+VR+ES+ + G +SR W P+D+YQVL  N+ T
Sbjct: 466 SVLIDRCLIKFSDDKVQMHDLLQEMAHEVVRKESLNELGGQSRSWSPKDVYQVLTNNQGT 525

Query: 481 SLPTGINLD--SLKELYLGGCSNLKRFPE------------ISCNIEDLDLKETAIEE-- 524
               GI LD   ++E+ L   + L+R  +            + C +      E+  EE  
Sbjct: 526 GKVEGIFLDVSKIREIELSS-TALERMYKLRLLKIYNSEAGVKCRVHLPHGLESLSEELR 584

Query: 525 -----------LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
                      LPS+      LV+++L+ CS +  +     NL +L+ +NLS C  +  +
Sbjct: 585 YLHWDGYPLTSLPSNF-RPQNLVEINLS-CSKVNRLWRGHQNLVNLKDVNLSNCEHITFM 642

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL---PCGSSI 629
           P ++    +LE LNL       K PSS++ L KL DL L+ CKRL +LP      C  ++
Sbjct: 643 P-DLSKARNLERLNLQFCTSLVKFPSSVQHLDKLVDLDLRGCKRLINLPSRINSSCLETL 701

Query: 630 HARHCTSLKTLSNSSTLLT 648
           +   C +LK    ++  LT
Sbjct: 702 NVSGCANLKKCPETARKLT 720



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 16/193 (8%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            LP+ I  L  L+ L L GC   + FPE+      +  L L++T I +LPS IGNL  L  
Sbjct: 892  LPSSICKLRKLQRLNLSGCVQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLAC 951

Query: 538  LDLTNCSGLKSVSSRL-------CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
            L++ NC  L+ +   +       C L  LR+LNL GC ++ ++P+ +G + SLE L+L+ 
Sbjct: 952  LEVGNCQHLRDIECIVDLQLPERCKLDCLRKLNLDGC-QIWEVPDSLGLVSSLEVLDLSG 1010

Query: 591  KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTR 649
             +F  IP S+ +L +L  L L+NC+ L+SLPELP   S + A +C SL+T+S SST +  
Sbjct: 1011 NNFRSIPISINKLFELQYLGLRNCRNLESLPELPPRLSKLDADNCWSLRTVSCSSTAVEG 1070

Query: 650  SSKHWDIFNFSNC 662
            +      F F+NC
Sbjct: 1071 NIFE---FIFTNC 1080



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 1/145 (0%)

Query: 477 NENTSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
           N   +LP+ ++ L  L++L L GCSN+  FP++S  I++L L  TAI E+PSSI  L  L
Sbjct: 819 NRLKNLPSAVSKLVCLEKLDLSGCSNITEFPKVSNTIKELYLNGTAIREIPSSIECLFEL 878

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            +L L NC   + + S +C L+ L+RLNLSGC++    PE +  +  L YL L +    K
Sbjct: 879 AELHLRNCKQFEILPSSICKLRKLQRLNLSGCVQFRDFPEVLEPMVCLRYLYLEQTRITK 938

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSL 620
           +PS +  L  L+ L + NC+ L+ +
Sbjct: 939 LPSPIGNLKGLACLEVGNCQHLRDI 963



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 86/141 (60%), Gaps = 3/141 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LP+ IN   L+ L + GC+NLK+ PE +  +  L+L ETA+EELP SIG L+ LV L+L
Sbjct: 688 NLPSRINSSCLETLNVSGCANLKKCPETARKLTYLNLNETAVEELPQSIGELNGLVALNL 747

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  L ++   +  LKSL   ++SGC  + +LP+   N   + YL L     E++PSS+
Sbjct: 748 KNCKLLVNLPENMYLLKSLLIADISGCSSISRLPDFSRN---IRYLYLNGTAIEELPSSI 804

Query: 601 KQLSKLSDLRLQNCKRLQSLP 621
             L +L  L L  C RL++LP
Sbjct: 805 GDLRELIYLDLGGCNRLKNLP 825



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 3/130 (2%)

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
           + GCS++ R P+ S NI  L L  TAIEELPSSIG+L  L+ LDL  C+ LK++ S +  
Sbjct: 771 ISGCSSISRLPDFSRNIRYLYLNGTAIEELPSSIGDLRELIYLDLGGCNRLKNLPSAVSK 830

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           L  L +L+LSGC  + + P+    ++ L YLN       +IPSS++ L +L++L L+NCK
Sbjct: 831 LVCLEKLDLSGCSNITEFPKVSNTIKEL-YLNGTA--IREIPSSIECLFELAELHLRNCK 887

Query: 616 RLQSLPELPC 625
           + + LP   C
Sbjct: 888 QFEILPSSIC 897


>gi|224145030|ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862376|gb|EEE99882.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1435

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 294/747 (39%), Positives = 411/747 (55%), Gaps = 112/747 (14%)

Query: 1   MASSSSSINMIPHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEIS 59
           MASSS+    + H  K+DVFLSFRGKD R+NF SHL  ALCR+KI+TFIDD+L RG EI+
Sbjct: 1   MASSSA----VAHKWKYDVFLSFRGKDTRNNFTSHLYDALCRKKIKTFIDDRLERGGEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-Y 118
           P+L   IE S+IS+VIFS+ YASS WC++ELVKILE K  YGQIV+PVFY V+PSD    
Sbjct: 57  PALLKTIEESRISVVIFSKNYASSPWCVDELVKILECKETYGQIVLPVFYHVNPSDVDEQ 116

Query: 119 CPSLG---------WMGIFD---------------------IPTSESVLIEGNVNDISKK 148
             S G         + G  D                     + + ES L+   V  I K+
Sbjct: 117 TGSFGNAFAELEKNFKGKMDKVPRWRADLTNAASISGWDSQVTSPESKLVTDVVQTIWKR 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L+   PS  +  LVG +S I++I   L    ++  T+GIWG+GGIGKTTIA A Y + SS
Sbjct: 177 LNRASPSKLRG-LVGADSRIEQINKLLSIVPSDVRTIGIWGMGGIGKTTIAGAFYDSFSS 235

Query: 209 HFEGSYFMQNIRDESEKVGGLANI-------------------HL-NFERRRLSRMKVLI 248
            +EG +F+ NIR ESEK G L ++                   H+  F R RL + KVL+
Sbjct: 236 QYEGHHFLPNIRQESEK-GRLNDLRDELLSKLLEEENLRVGTPHIPTFIRDRLCQKKVLL 294

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  D+ D++Q   L   +     GS V++T+RD Q+LKN     V  ++EV EL+ +++L
Sbjct: 295 VLDDVNDVRQFQHL-NEVPLIGAGSVVVVTSRDKQVLKN----VVDEIYEVGELNSHEAL 349

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            LFS NAF  NHP   ++ELS   I YA G PLAL+VLGS+L       WES +N+++  
Sbjct: 350 QLFSLNAFKGNHPPKAYMELSITAINYAKGNPLALRVLGSFLFNRERHFWESQLNEIESF 409

Query: 369 PHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
           P ++I  +L++ +D L D+  ++IFLD ACFF+G+    V   LD C F   IG S L+ 
Sbjct: 410 PELNICDLLRIGFDALRDNNTKSIFLDIACFFRGHRVDFVKRILDGCGFKTDIGFSVLID 469

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTG 485
           + L+ IS++K+ MHDLLQEM  E+VR+ES  +  K+SRLW+P+D YQVL  N  T    G
Sbjct: 470 RCLIKISDDKVEMHDLLQEMAHEVVRKESAYELRKQSRLWNPKDAYQVLTNNLGTGKVEG 529

Query: 486 INLD-----------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
           I LD                  ++E+ L   +  + +      I +    +     LPS 
Sbjct: 530 IFLDVSKIRTEKVEGMFLDVSEIREIELSSTAFARMYNLRLLKIYNSAAGDKCTVHLPSG 589

Query: 529 IGNLSR-----------------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
           + +LS                        LV+L+L++ S +K +     NL +L+ +NLS
Sbjct: 590 LESLSHELRYLHWDGYPLTSLPCNFRPQNLVELNLSS-SKVKQLWRGDQNLGNLKDVNLS 648

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL- 623
            C  +  LP ++    +LE LNL   K   K PSS++ L KL DL L+ CKRL +LP   
Sbjct: 649 NCEHITFLP-DLSKARNLERLNLQFCKSLVKFPSSIQHLDKLVDLDLRGCKRLINLPSRI 707

Query: 624 --PCGSSIHARHCTSLKTLSNSSTLLT 648
              C  +++   C +LK    ++  LT
Sbjct: 708 NSSCLETLNLSGCANLKKCPETAGKLT 734



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 2/165 (1%)

Query: 477 NENTSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
           N   +LP+ ++ L  L++L L GCS++  FP++S NI +L L  TAI E+PSSI  L  L
Sbjct: 833 NRLKNLPSAVSKLGCLEKLDLSGCSSITEFPKVSRNIRELYLDGTAIREIPSSIECLCEL 892

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            +L L NC   + + S +C LK LRRLNLSGCL+    PE +  +  L YL L +    K
Sbjct: 893 NELHLRNCKQFEILPSSICKLKKLRRLNLSGCLQFRDFPEVLEPMVCLRYLYLEQTRITK 952

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
           +PS +  L  L+ L + NCK L+ +     G  +  RH   L  L
Sbjct: 953 LPSPIGNLKGLACLEVGNCKYLEDI-HCFVGLQLSKRHRVDLDCL 996



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 108/196 (55%), Gaps = 19/196 (9%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            LP+ I  L  L+ L L GC   + FPE+      +  L L++T I +LPS IGNL  L  
Sbjct: 906  LPSSICKLKKLRRLNLSGCLQFRDFPEVLEPMVCLRYLYLEQTRITKLPSPIGNLKGLAC 965

Query: 538  LDLTNCS---------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
            L++ NC          GL+       +L  LR+LNL GC  L ++P+ +G L SLE L+L
Sbjct: 966  LEVGNCKYLEDIHCFVGLQLSKRHRVDLDCLRKLNLDGC-SLSEVPDSLGLLSSLEVLDL 1024

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL-SNSSTL 646
            +  +   IP S+ +L +L  L L+NCKRLQSLPELP   S +   +C SL  L S SST+
Sbjct: 1025 SGNNLRTIPISINKLFELQYLGLRNCKRLQSLPELPPRLSKLDVDNCQSLNYLVSRSSTV 1084

Query: 647  LTRSSKHWDIFNFSNC 662
            +  +      F F+NC
Sbjct: 1085 VEGNIFE---FIFTNC 1097



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/146 (43%), Positives = 90/146 (61%), Gaps = 4/146 (2%)

Query: 481 SLPTGINL-DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           +LP  I L  SL  + + GCS++ RFP+ S NI  L L  TAIEELPSSIG L  L+ LD
Sbjct: 769 NLPENIYLLKSLLIVDISGCSSISRFPDFSWNIRYLYLNGTAIEELPSSIGGLRELIYLD 828

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L  C+ LK++ S +  L  L +L+LSGC  + + P+   N+  L YL+       +IPSS
Sbjct: 829 LVGCNRLKNLPSAVSKLGCLEKLDLSGCSSITEFPKVSRNIREL-YLDGTA--IREIPSS 885

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELPC 625
           ++ L +L++L L+NCK+ + LP   C
Sbjct: 886 IECLCELNELHLRNCKQFEILPSSIC 911



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 7/168 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LP+ IN   L+ L L GC+NLK+ PE +  +  L+L ETA+EELP SIG LS LV L+L
Sbjct: 702 NLPSRINSSCLETLNLSGCANLKKCPETAGKLTYLNLNETAVEELPQSIGELSGLVTLNL 761

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  + ++   +  LKSL  +++SGC  + + P+   N   + YL L     E++PSS+
Sbjct: 762 KNCKLVLNLPENIYLLKSLLIVDISGCSSISRFPDFSWN---IRYLYLNGTAIEELPSSI 818

Query: 601 KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSS 644
             L +L  L L  C RL++LP    +L C   +    C+S+      S
Sbjct: 819 GGLRELIYLDLVGCNRLKNLPSAVSKLGCLEKLDLSGCSSITEFPKVS 866



 Score = 43.1 bits (100), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 46/181 (25%)

Query: 470  EDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
            EDI+  +    S    ++LD L++L L GCS                     + E+P S+
Sbjct: 975  EDIHCFVGLQLSKRHRVDLDCLRKLNLDGCS---------------------LSEVPDSL 1013

Query: 530  GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--------EIGNLE 581
            G LS L  LDL+  + L+++   +  L  L+ L L  C +L+ LPE        ++ N +
Sbjct: 1014 GLLSSLEVLDLSG-NNLRTIPISINKLFELQYLGLRNCKRLQSLPELPPRLSKLDVDNCQ 1072

Query: 582  SLEYL----------NLAEKDFE---KIPSSMKQLSKLSDLRLQ-NCKRL-QSLPELPCG 626
            SL YL          N+ E  F    ++P  + Q+ + S L+ Q   KRL   LP++P G
Sbjct: 1073 SLNYLVSRSSTVVEGNIFEFIFTNCLRLP-VVNQILEYSLLKFQLYTKRLYHQLPDVPEG 1131

Query: 627  S 627
            +
Sbjct: 1132 A 1132


>gi|147784070|emb|CAN72303.1| hypothetical protein VITISV_009715 [Vitis vinifera]
          Length = 1135

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 274/705 (38%), Positives = 378/705 (53%), Gaps = 111/705 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R+NF +HL  ALC++ I TFIDD KL RG  ISP+L +AIE S  SI
Sbjct: 15  RYDVFLSFRGEDTRNNFTAHLYHALCQKGINTFIDDDKLERGQVISPALVAAIENSMFSI 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSLG----- 123
           V+ S+ YA SRWCL ELVKI+E      Q VVP+FY VDPSD       +  +L      
Sbjct: 75  VVLSKNYAFSRWCLQELVKIVECXKSRRQRVVPIFYNVDPSDVRRQRGIFGEALAKHEEN 134

Query: 124 ---------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W           G      +E +LI+  V  I  KL     SD ++ LVG+
Sbjct: 135 SEXMERVQSWKDALTQVANLSGWDSRNKNEPLLIKEIVTXILNKLLSTSISDXEN-LVGI 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ++ ++EIE +L  GS +F  VGIWG+GGIGKTT+A AIY  I+  FE   F +N+ ++  
Sbjct: 194 DARMQEIEMRLCLGSDDFLMVGIWGMGGIGKTTLARAIYRKITCQFEACCFFENVGEDLA 253

Query: 225 KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL----DGFVPGSRVIITTR 280
           K  GL  +   F  + L    +        ++K    + GRL    D F  GSR+IITTR
Sbjct: 254 K-EGLIGLQQKFLAQLLEEPNL--------NMKAXTSIKGRLHSKKDWFGRGSRIIITTR 304

Query: 281 DVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVP 340
           D  LL +H    V + +E +  +Y+++    +  +     P   F+E+S  VI YA G+P
Sbjct: 305 DKXLLISH---GVLNYYEAQRFNYDEAXEFLTPYSLKHKIPXDDFMEVSKEVIGYAQGLP 361

Query: 341 LALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFK 400
           LAL+VLGS+L  M++EEW + ++KLK  P+M IQ+VLKVSYDGLDD+E+NI LD ACFFK
Sbjct: 362 LALEVLGSFLFSMTKEEWRNQLDKLKSTPNMKIQEVLKVSYDGLDDKEKNIXLDIACFFK 421

Query: 401 GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKD 459
           G D+  VM  LD C F +  GI  L+ KSLVTIS +N+J MHDL+QEMG EIVRQ+S+ +
Sbjct: 422 GEDKDYVMEILDGCGFFSLSGIRALIDKSLVTISWSNEJMMHDLIQEMGREIVRQQSLXE 481

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPT--GI--NLDSLKELYLGGCSNLKRF---------- 505
           PGKRSRLW  EDI  VL +NT+     GI  NL  L+E+       L R           
Sbjct: 482 PGKRSRLWFHEDINXVLKKNTATEKIEGIFLNLSHLEEMLYFTTQALARMNRLRLLKVYN 541

Query: 506 -PEISCNIED----------------------------------------------LDLK 518
              IS N +D                                              L + 
Sbjct: 542 SKNISRNFKDTSNMENCKVNFSKDFKFCYHDLRCLYFYGYSLKSLPNDFNPKNLIELSMP 601

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            + I++L   I  L+ L  +DL++   L   +     + +L+RL L GC+ L K+   +G
Sbjct: 602 YSRIKQLWKGIXVLANLKFMDLSHSKYLIE-TPNFRGVTNLKRLVLEGCVSLRKVHSSLG 660

Query: 579 NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +L++L +LNL   +  + +PSS   L  L    L  C + +  PE
Sbjct: 661 DLKNLIFLNLKNCQMLKSLPSSTCDLKSLETFILSGCSKFKEFPE 705



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/184 (42%), Positives = 97/184 (52%), Gaps = 25/184 (13%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+   +L SL+   L GCS  K FPE   ++E   +L   E AI  LPSS   L  L 
Sbjct: 678 SLPSSTCDLKSLETFILSGCSKFKEFPENFGSLEMLKELYXDEIAIGVLPSSFSFLRNLQ 737

Query: 537 DLDLTNCSG---------------LKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNL 580
            L    C G               + S+   L  L+SL RLNLS C L  E     +G L
Sbjct: 738 ILSFKGCKGPSSTLWLLPRRSSNSIGSILQPLSGLRSLIRLNLSNCNLSDEPNLSSLGFL 797

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSL 637
            SLE L L   DF  +PS++ QLS L+ L L+NCKRLQ LPELP  SSI+   A +CTSL
Sbjct: 798 SSLEELYLGGNDFVTLPSTISQLSNLTLLGLENCKRLQVLPELP--SSIYYICAENCTSL 855

Query: 638 KTLS 641
           K +S
Sbjct: 856 KDVS 859



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 9/118 (7%)

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
           G +NLKR     C          ++ ++ SS+G+L  L+ L+L NC  LKS+ S  C+LK
Sbjct: 637 GVTNLKRLVLEGC---------VSLRKVHSSLGDLKNLIFLNLKNCQMLKSLPSSTCDLK 687

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           SL    LSGC K ++ PE  G+LE L+ L   E     +PSS   L  L  L  + CK
Sbjct: 688 SLETFILSGCSKFKEFPENFGSLEMLKELYXDEIAIGVLPSSFSFLRNLQILSFKGCK 745


>gi|359495289|ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 281/757 (37%), Positives = 405/757 (53%), Gaps = 123/757 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R++F +HL   L  + I TFIDD KL RG+ IS +L +AI+ SK S+V
Sbjct: 46  YDVFLSFRGEDTRNSFTAHLYKELRTKGINTFIDDDKLERGDVISSALVAAIQNSKFSLV 105

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------ 123
           + SE YASS WCL ELVKILE     GQ V+P+FY VDPS     +  +  +L       
Sbjct: 106 VLSENYASSGWCLEELVKILECMRTMGQRVLPIFYDVDPSHVRQHNGKFGEALAKHEENL 165

Query: 124 --------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                   W           G       E +LI+G    I  KL     +     LVG+E
Sbjct: 166 RTMERVPIWRDALTQVANLSGWDSRNKHEPMLIKGIATYIWNKLFSRSSNYADQNLVGIE 225

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           S I+EI+S L + S +   VGIWG+GGIGKTT+A A+Y+ IS  FE   F++N+ D  EK
Sbjct: 226 SSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHQFEACCFLENVSDYLEK 285

Query: 226 VGGLANIHLNFERRRLSRM---------------------KVLIVFYDLTDLKQIDLLIG 264
                   L+ +++ LS++                     KVLIV  D+ + K ++ LIG
Sbjct: 286 QD-----FLSLQKKYLSQLLEDENLNTKGCISIKALLCSKKVLIVIDDVNNSKILEDLIG 340

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           +   F  GSR+IITTR+ QLL  H    V  V++ ++L+ ++++ LFSR AF + HP   
Sbjct: 341 KHGWFGIGSRIIITTRNKQLLVTH---GVNEVYQAEKLNDDNAVELFSRYAFKKAHPIDD 397

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           ++ELS  ++ YA G+PLAL+VLGS+L   S+ +WES ++KLK++P  +IQ VL+VS+DGL
Sbjct: 398 YVELSQCIVVYAQGLPLALRVLGSFLFDKSKRQWESQLDKLKKIPKKEIQDVLRVSFDGL 457

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           +D E++IFLD ACFF+G+D+  VM    +C F   IGI  L+ KSL+++  NK+ MH+LL
Sbjct: 458 EDNERDIFLDIACFFQGHDKDYVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMMHNLL 517

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGINLD--SLKELYLGG-- 498
           Q+MG EIVR+ S K+PGKRSRLW  +D+  VL + T      GI+LD  SLKE+      
Sbjct: 518 QKMGREIVREASPKEPGKRSRLWIHDDVNHVLTKKTGTEEVEGISLDLSSLKEINFTNEA 577

Query: 499 -------------------------CS-NLKRFPEISC-NIEDLDLKETAIEELPSSIGN 531
                                    C  +  R  +  C  +  L   E  ++ LP+   N
Sbjct: 578 FAPMNRLRLLKVYTLNFLMDSKREKCKVHFSRGFKFHCEELRHLYWYEYPLKSLPNDF-N 636

Query: 532 LSRLVDLDLTNCS------GLKSVSS-RLCNLK---------------SLRRLNLSGCLK 569
           L  LVDL +          G K + + +  NLK               +L RL L GC+ 
Sbjct: 637 LKNLVDLSMPYSQIKQLWKGTKVLENLKFMNLKHSKFLTETPDFSRVTNLERLVLKGCIS 696

Query: 570 LEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
           L K+   +G+L  L +L+L   K  + +PS +  L  L    L  C + + LPE      
Sbjct: 697 LYKVHPSLGDLNKLNFLSLKNCKMLKSLPSCICDLKCLEVFILSGCSKFEELPENFGNLE 756

Query: 629 IHARHC---TSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           +    C   T+++ L +S +LL    ++ +I +F  C
Sbjct: 757 MLKEFCADGTAIRVLPSSFSLL----RNLEILSFERC 789



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 96/192 (50%), Gaps = 34/192 (17%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE-----TAIEELPSSIGNLSR 534
           SLP+ I +L  L+   L GCS  +  PE   N+E L  KE     TAI  LPSS   L  
Sbjct: 723 SLPSCICDLKCLEVFILSGCSKFEELPENFGNLEML--KEFCADGTAIRVLPSSFSLLRN 780

Query: 535 LVDLDLTNCSG--------LKSVSSRLCNL-------------KSLRRLNLSGCLKLEKL 573
           L  L    C G        L   SS   N               SL   N+S    L+ L
Sbjct: 781 LEILSFERCKGPPPSTSWWLPRRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSL 840

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
               G L SLE L+L+E +F  +PS++ +L  L  L L+NCKRLQ+LPELP    SI AR
Sbjct: 841 ----GFLSSLEDLDLSENNFVTLPSNISRLPHLKMLGLENCKRLQALPELPTSIRSIMAR 896

Query: 633 HCTSLKTLSNSS 644
           +CTSL+T+SN S
Sbjct: 897 NCTSLETISNQS 908



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 3/131 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L++LK + L     L   P+ S   N+E L LK   ++ ++  S+G+L++L  L L NC 
Sbjct: 660 LENLKFMNLKHSKFLTETPDFSRVTNLERLVLKGCISLYKVHPSLGDLNKLNFLSLKNCK 719

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS+ S +C+LK L    LSGC K E+LPE  GNLE L+           +PSS   L 
Sbjct: 720 MLKSLPSCICDLKCLEVFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLR 779

Query: 605 KLSDLRLQNCK 615
            L  L  + CK
Sbjct: 780 NLEILSFERCK 790


>gi|359486073|ref|XP_002272820.2| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1296

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 234/539 (43%), Positives = 318/539 (58%), Gaps = 61/539 (11%)

Query: 13  HP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           HP K++VFLSFRG+D R NF  HL+ AL R  I  FIDD+L RG +IS +L  AIE S+ 
Sbjct: 22  HPWKYEVFLSFRGEDTRKNFTDHLHEALRRNGIHAFIDDQLRRGEQISSALLRAIEESRF 81

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--------------- 116
           SI+IFSE YASS WCL+EL KILE     G    PVFY VDPS                 
Sbjct: 82  SIIIFSEHYASSSWCLDELTKILECVKVGGHTAFPVFYNVDPSHVRKQTGSYGVAFTKHE 141

Query: 117 ---------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                G  G       ES  I+  V+ I K+L+D   S N + L
Sbjct: 142 QVYRDNMEKVSKWREALTAVSGLSGWDSRNEHESEFIKEIVSKIWKELNDA-SSCNMEAL 200

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S I+++ S L  GS +   VGIWG+ GIGKTTIA A+Y  I + FEG  F+ N+R+
Sbjct: 201 VGMDSHIQKMFSLLRIGSDDVRMVGIWGMAGIGKTTIAEAVYQKIRTQFEGCCFLSNVRE 260

Query: 222 ESEKVG--------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           +S+                       GL +  +N   + L  M+VLIV  D+   +Q+++
Sbjct: 261 KSQNNDPAVIQMKLLSQIFEKGNLNTGLLSGGINVIEKTLHSMRVLIVLDDVDCPQQLEV 320

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  + F PGSR+IITTR+  LL          ++ VKEL+ +++  LF ++AF    P
Sbjct: 321 LAGNHNWFGPGSRIIITTREKHLLDEKV-----EIYIVKELNKDEARKLFYQHAFKYKPP 375

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           A  F++L +  + Y  G+PLAL++LG +L   S++EWES + KL+R+P+ +IQ VL++S+
Sbjct: 376 AGDFVQLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNNEIQDVLRISF 435

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGLDD +++IFLD ACFFKG D+  V+  L +C F  +IGI  L+ KSLVTIS NK+ MH
Sbjct: 436 DGLDDNQKDIFLDIACFFKGQDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMH 495

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYL 496
           DL+Q+MG EIVRQESIKDPGKRSRLW  +D+  +L  NT         +NL +LKEL+ 
Sbjct: 496 DLIQKMGWEIVRQESIKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTLKELHF 554



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 103/164 (62%), Gaps = 10/164 (6%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+L+SL+ L L GCS LK+FPE+     N  +L LK TAI+ LP SI  L+ L  
Sbjct: 715 SFLSSIHLESLQILTLSGCSKLKKFPEVQGPMDNFSELSLKGTAIKGLPLSIEYLNGLAL 774

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C  L+S+ S +  LKSL+ L LS C +L+KLPE   N+ESL+ L L +    ++P
Sbjct: 775 LNLEECKSLESLPSCIFKLKSLKTLILSNCSRLKKLPEIGENMESLKELFLDDTGLRELP 834

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           SS++ L+ L  L+L+NCKRL SLPE  C         TSL+TL+
Sbjct: 835 SSIEHLNGLVLLKLKNCKRLASLPESFC-------KLTSLQTLT 871



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 85/139 (61%), Gaps = 4/139 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SLK L L  CS LK+ PEI  N+E L    L +T + ELPSSI +L+ LV
Sbjct: 785 SLPSCIFKLKSLKTLILSNCSRLKKLPEIGENMESLKELFLDDTGLRELPSSIEHLNGLV 844

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L L NC  L S+    C L SL+ L LSGC +L+KLP+++G+L+ L  L       +++
Sbjct: 845 LLKLKNCKRLASLPESFCKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEV 904

Query: 597 PSSMKQLSKLSDLRLQNCK 615
           P+S+  L+KL  L L  CK
Sbjct: 905 PTSITLLTKLQVLSLAGCK 923



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 110/208 (52%), Gaps = 28/208 (13%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
             SLP     L SL+ L L GCS LK+ P+    + C ++ L    + I+E+P+SI  L++
Sbjct: 855  ASLPESFCKLTSLQTLTLSGCSELKKLPDDMGSLQCLLK-LKANGSGIQEVPTSITLLTK 913

Query: 535  LVDLDLTNCSGLKSVS-----------------SRLCNLKSLRRLNLSGCLKLE-KLPEE 576
            L  L L  C G  S S                 S L  L SL++LNLS C  LE  LP +
Sbjct: 914  LQVLSLAGCKGGGSKSKNLALSLRASPTDGLRLSSLTVLHSLKKLNLSDCNLLEGALPSD 973

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
            + +L  LE L+L+   F  +PS + +L +L  L L++CK L+SLPELP     + A  CT
Sbjct: 974  LSSLSWLECLDLSRNSFITVPS-LSRLPRLERLILEHCKSLRSLPELPSSVEELLANDCT 1032

Query: 636  SLKTLSN-SSTLLTRSSKHWDIFNFSNC 662
            SL+T+SN SS    R+S H     F NC
Sbjct: 1033 SLETISNPSSAYAWRNSGHL-YSEFCNC 1059


>gi|255537137|ref|XP_002509635.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223549534|gb|EEF51022.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1034

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 281/766 (36%), Positives = 399/766 (52%), Gaps = 151/766 (19%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS SS+ +     K+DVFLSFRG D R NF SHL+ ALCR+ I TFIDD+L+RG +I+P
Sbjct: 1   MASPSSASHSTHKWKYDVFLSFRGADTRQNFTSHLHFALCRKSIRTFIDDELSRGEQITP 60

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L   +E S+I+++IFS+ Y SS +CL+E+ KI+E    + Q VVPVFY VDP D     
Sbjct: 61  ALLEVVEESRIAVIIFSKNYGSSTFCLDEVAKIIECNETHRQTVVPVFYHVDPLDVENQT 120

Query: 117 -------------GYCPSLGWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDL 152
                         +     W        S           ES L+E  V DI +KL   
Sbjct: 121 GSFETAFAKHEIHNFDRVQRWKAALSKAASMAGWDSKVIRMESQLVENIVRDILEKLKQA 180

Query: 153 FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTV--------------GIWGIGGIGKTTI 198
           +P D  + LVG++S I EI++ L + + + N++              GIWG+GGIGKTT+
Sbjct: 181 YPCD-LEGLVGIKSRIGEIKALLFAENQKSNSIRASISTKPLDVRVLGIWGMGGIGKTTL 239

Query: 199 ASAIYSNISSHFEGSYFMQNIRDESEKVGGL-------------ANIHLN--------FE 237
           A A++S+I+  FEG  F+ ++R   EK  G              +++ ++        F 
Sbjct: 240 AKAVFSDIACQFEGRCFLPSVRKFFEKDDGYYIIKELLSQISRESDVKISKTDILCSPFV 299

Query: 238 RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVF 297
           +R L+R  VL++  D+   +Q+D      + F  GSR+I+T+RD Q+L    GS    ++
Sbjct: 300 KRMLNR-NVLVIIDDVNSPQQLDFFAENRNWFGTGSRIIVTSRDRQIL---LGS-ADDIY 354

Query: 298 EVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEE 357
           E+K+L YN++  LFS+NAF +  P  G + LS+  I+YANG+PLAL+VLGS L G +E +
Sbjct: 355 EIKKLGYNEAQQLFSQNAFKKTFPPEGLIALSHSYIQYANGIPLALKVLGSNLFGRTERK 414

Query: 358 WESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQY-LVMNFLDACRF 416
           W+S + KL++ P+ D+  +LKVSYDGLD EE+ IFL    FF    +   V   LD C F
Sbjct: 415 WKSTLEKLRQAPNKDVLNILKVSYDGLDKEEKEIFLHVVSFFSRKKKIDEVTQILDGCGF 474

Query: 417 SAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           S ++ +  LV KSL+TIS+N I +HDLL  MG EIVRQES  +PG+ SRLW  EDI +VL
Sbjct: 475 STEVVLCDLVDKSLITISDNTIAIHDLLHAMGMEIVRQEST-EPGEWSRLWDHEDILRVL 533

Query: 477 NEN--TSLPTGINLD--------SLKELYLGGCSNLK--RFPE----------------- 507
             N  T     I LD         L        SNLK  RF +                 
Sbjct: 534 TRNAGTEAIEAIFLDMSKIDEIIDLNPNVFARMSNLKLLRFYDPNFDSRELKDIKVRLSR 593

Query: 508 ---------------------ISCNIEDLDLKE-----TAIEELPSSIGNLSRLVDLDLT 541
                                +  N    DL E     + ++ LP    +L +L ++DL+
Sbjct: 594 GLDSLSSKLQYLYWNGYPSKTLPANFHPKDLVELHLPSSKLKRLPWKNMDLKKLKEIDLS 653

Query: 542 NCSGLKSVS--SRLCNL--------KSLRR------------LNLSGCLKLEKLPEEIGN 579
             S L +V   SR  NL        K +RR            LNLS C+KLE+ P+    
Sbjct: 654 WSSRLTTVPELSRATNLTCINLSDSKRIRRFPSTIGLDSLETLNLSDCVKLERFPDVS-- 711

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             S+ +L L     E++PSS+  LS+L  L L +C +L+SLP   C
Sbjct: 712 -RSIRFLYLYGTAIEEVPSSVGCLSRLVSLNLFDCTKLKSLPTSIC 756



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 96/163 (58%), Gaps = 4/163 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            P+ I LDSL+ L L  C  L+RFP++S +I  L L  TAIEE+PSS+G LSRLV L+L 
Sbjct: 684 FPSTIGLDSLETLNLSDCVKLERFPDVSRSIRFLYLYGTAIEEVPSSVGCLSRLVSLNLF 743

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +C+ LKS+ + +C +KSL  L LSGC  L+  PE    ++ L  L L       +P S++
Sbjct: 744 DCTKLKSLPTSICKIKSLELLCLSGCTNLKHFPEISETMDCLVELYLDGTAIADLPLSVE 803

Query: 602 QLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTL 640
            L +LS L L NC+ L  LPE    L   SS+    C  L+ L
Sbjct: 804 NLKRLSSLSLSNCRNLVCLPESISKLKHLSSLDFSDCPKLEKL 846



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/181 (41%), Positives = 99/181 (54%), Gaps = 30/181 (16%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEIS----CNIEDLDLKETAIEELPSSIGNLSRL 535
           SLPT I  + SL+ L L GC+NLK FPEIS    C +E L L  TAI +LP S+ NL RL
Sbjct: 750 SLPTSICKIKSLELLCLSGCTNLKHFPEISETMDCLVE-LYLDGTAIADLPLSVENLKRL 808

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE------------------- 576
             L L+NC  L  +   +  LK L  L+ S C KLEKLPEE                   
Sbjct: 809 SSLSLSNCRNLVCLPESISKLKHLSSLDFSDCPKLEKLPEELIVSLELIARGCHLSKLAS 868

Query: 577 -IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHA 631
            +  L  L +L+L++  FE +P S+KQLS+L  L +  C RL+SLP+L        +I+A
Sbjct: 869 DLSGLSCLSFLDLSKTKFETLPPSIKQLSQLITLDISFCDRLESLPDLSLSLQFIQAIYA 928

Query: 632 R 632
           R
Sbjct: 929 R 929


>gi|147774169|emb|CAN63551.1| hypothetical protein VITISV_032106 [Vitis vinifera]
          Length = 924

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 274/732 (37%), Positives = 392/732 (53%), Gaps = 127/732 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R +F  HL +AL R  I TF DD+ L RG EI+P L  AIE S+I+I+
Sbjct: 21  YDVFLSFRGEDTRKSFTDHLYSALIRNNIHTFRDDEELPRGEEIAPELLKAIEESRIAII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----AGYCPSL-------- 122
           +FS+ YA S+WCL+ELVKI+E K + GQIV+P+FY VDPS+     G C           
Sbjct: 81  VFSKTYAHSKWCLDELVKIMECKXERGQIVIPIFYNVDPSEVRKQTGICGEAFTXHEENA 140

Query: 123 ---------GWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W    +   +          ES LI+  + ++   L  +   +  + +VG
Sbjct: 141 DEERKEKIRKWRTAMEQAGNLAGHVAENRYESTLIDEIIENVHGNLPKILGVN--ENIVG 198

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++S ++++ S L   S +   VG++G+GGIGKTTI +A+Y+ IS  FE    + N+R ES
Sbjct: 199 MDSRLEKLISLLKIESNDVRMVGVYGLGGIGKTTIINALYNQISHQFESVSLLTNVRKES 258

Query: 224 EKVGG--------------------LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            K  G                    L N++  +   R +LS  KVL+   D+ +L Q++ 
Sbjct: 259 TKNSGLLKLQQKLLDDTLRTKGQIVLKNVYEGIKIIRDKLSSKKVLVFLDDVDELTQLEH 318

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           LIG+ + F PGSR+IITTR   LL  H    V  ++EVK+L+++++L LF R AF Q+H 
Sbjct: 319 LIGKHNWFGPGSRIIITTRKKDLLTRHE---VNDIYEVKKLNFHEALQLFCRYAFKQHHL 375

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             G+ +LS+ V++YA+G+PLAL+VLGS L G     W+S + KL+++P+M+I  VLK+S+
Sbjct: 376 KEGYADLSHQVVRYADGLPLALKVLGSLLFGKRLPNWKSELRKLEKVPNMEIVNVLKISF 435

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITM 440
           DGLD  ++ IFLD ACFFKG D  +V   LD   F+A+ GI+ LV +  +TIS +K I M
Sbjct: 436 DGLDYTQRMIFLDIACFFKGGDVEIVSRILDGSEFNAESGINALVDRCFITISKDKTIEM 495

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLK-ELYLG 497
           HDLL +MG  IV +E   +PG+RSRLW   DIY+VL  NT      GI LD  K E    
Sbjct: 496 HDLLAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFLDVDKSEQIQF 555

Query: 498 GCSNLKR---------------FPE----ISCNIEDLDLKETAIEELPSSI--------- 529
            C   +R                PE     S ++  L     ++E LPS+          
Sbjct: 556 TCKAFERMNRLRXLVVSHNRIQLPEDFVFSSDDLTCLSWDGYSLESLPSNFHPNDLALLK 615

Query: 530 -----------GNLS----RLVDL-------DLTNCS--------------GLKSVSSRL 553
                      GN+     R +DL       +L N S               L+S+   +
Sbjct: 616 LSNSNIKLLWKGNMCLRNLRYIDLSHSQQLIELPNFSNVPNLEELILSGCVSLESLPGDI 675

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
             LK L  L+ SGC KL   P+   N+  LE L+L E   +++PSS++ L  L +L L N
Sbjct: 676 HKLKHLLTLHCSGCSKLTSFPKIKCNIGKLEVLSLDETAIKELPSSIELLEGLRNLYLDN 735

Query: 614 CKRLQSLPELPC 625
           CK L+ LP   C
Sbjct: 736 CKNLEGLPNSIC 747



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 4/112 (3%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLV 536
           SLP  I+ L  L  L+  GCS L  FP+I CNI   E L L ETAI+ELPSSI  L  L 
Sbjct: 670 SLPGDIHKLKHLLTLHCSGCSKLTSFPKIKCNIGKLEVLSLDETAIKELPSSIELLEGLR 729

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
           +L L NC  L+ + + +CNL+ L  L+L GC KL++LPE++  +  LE L+L
Sbjct: 730 NLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPCLEVLSL 781



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 26/149 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP   N+ +L+EL L GC                     ++E LP  I  L  L+ L  +
Sbjct: 648 LPNFSNVPNLEELILSGC--------------------VSLESLPGDIHKLKHLLTLHCS 687

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
            CS L S     CN+  L  L+L     +++LP  I  LE L  L L   K+ E +P+S+
Sbjct: 688 GCSKLTSFPKIKCNIGKLEVLSLDET-AIKELPSSIELLEGLRNLYLDNCKNLEGLPNSI 746

Query: 601 KQLSKLSDLRLQNCKRLQSLPE----LPC 625
             L  L  L L+ C +L  LPE    +PC
Sbjct: 747 CNLRFLEVLSLEGCSKLDRLPEDLERMPC 775


>gi|356557333|ref|XP_003546971.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1158

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 301/819 (36%), Positives = 418/819 (51%), Gaps = 167/819 (20%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           M +SSSS +  P  K+DVF+SFRG DVR  F+SHL   L +++++ F+DD+L  G+EIS 
Sbjct: 1   METSSSSQD--PRIKYDVFISFRGTDVRCGFLSHLKKELRQKQVDAFVDDRLEGGDEISH 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
           SL  AIEGS IS+VIFS+ YASS+WCL E+VKI+E  +   QIV+PVFY VDPSD     
Sbjct: 59  SLDKAIEGSLISLVIFSKDYASSKWCLEEVVKIIECMHSNKQIVIPVFYNVDPSDVRHQK 118

Query: 116 AGYCPSLG--------------WMGIFDIPTS-----------ESVLIEGNVNDISKKLS 150
             Y  +                W    +I  +           E  LIE     +S KL+
Sbjct: 119 GTYGDAFAKHEKNKRNLAKVPNWRCALNIAANLSGFHSSKFVDEVELIEEIAKCLSSKLN 178

Query: 151 DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGI-----WGIGGIGKTTIASAIYSN 205
            ++ S+   +LVG+E  I ++ES L  GST    VG+     WG+GGIGKTTIA+A+Y+ 
Sbjct: 179 LMYQSE-LTELVGIEERIADLESLLCLGST---IVGVRVIGIWGMGGIGKTTIAAAVYNR 234

Query: 206 ISSHFEGSYFMQNIRDESEKVG--------------------GLANIHLNFERRRLSRMK 245
           +   +EG  FM NI +ESEK G                    G  N    + +RRL R K
Sbjct: 235 LYFEYEGCCFMANITEESEKHGMIYVKNKIISILLKENDLQIGTPNGVPPYVKRRLIRKK 294

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VL+V  D+ D +Q++ L+G LD F  GSR+I+TTRD  +L    G +   V+E K L+ +
Sbjct: 295 VLVVLDDINDSEQLENLVGALDWFGSGSRIIVTTRDKGVL----GKKADIVYEAKALNSD 350

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           +++ LF  NAF Q+     ++ELS  VI+YANG PLAL+VLGS+L G S+ EWES + KL
Sbjct: 351 EAIKLFMLNAFKQSCLEMEWIELSRRVIQYANGNPLALKVLGSFLYGKSQIEWESQLQKL 410

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           K+MP + IQ VL+++YD LD EE+NIFL  ACFFKG +   ++  LDAC FS  IG+  L
Sbjct: 411 KKMPQVKIQNVLRLTYDRLDREEKNIFLYIACFFKGYEVRRIIYLLDACGFSTIIGLRVL 470

Query: 426 VGKSLVTISNNK----ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
             K+L+  +       ++MHDL+QEMG EIVR+E I+DPGKR+RLW P DI+ VL  NT 
Sbjct: 471 KDKALIIEAKGSGISIVSMHDLIQEMGWEIVREECIEDPGKRTRLWDPNDIHLVLKNNTG 530

Query: 482 ----------------------------------------------LPTGI-NLDSLKEL 494
                                                         LP G+ +L +   L
Sbjct: 531 TKAIKSITFNVSKFDEVCLSPQIFERMQQLKFLNFTQHYGDEQILYLPKGLESLPNDLRL 590

Query: 495 YLGGCSNLKRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLT----------- 541
           +      LK  P   C  N+ +L L  + +E+L   I NL  L  +DL+           
Sbjct: 591 FHWVSYPLKSLPLSFCAENLVELKLPWSRVEKLWDGIQNLEHLKKIDLSYSKNLLELPDF 650

Query: 542 ------------NCSGLKSVSSRLCNLKSLRRLNLSGCLKL------------------- 570
                       +C  L++V   + +LK L RLNL  C  L                   
Sbjct: 651 SKASNLEEVELYSCKNLRNVHPSILSLKKLVRLNLFYCKALTSLRSDSHLRSLRDLFLGG 710

Query: 571 -EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPC 625
             +L E     E+++ L L      ++PSS+  L KL  L L +CK L +LP     L  
Sbjct: 711 CSRLKEFSVTSENMKDLILTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKVANLRS 770

Query: 626 GSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
              +H   CT L   +++  +L    K  +      C N
Sbjct: 771 LRRLHIYGCTQLD--ASNLHILVNGLKSLETLKLEECRN 807



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 111/188 (59%), Gaps = 27/188 (14%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           TSL +  +L SL++L+LGGCS LK F   S N++DL L  TAI ELPSSIG+L +L  L 
Sbjct: 692 TSLRSDSHLRSLRDLFLGGCSRLKEFSVTSENMKDLILTSTAINELPSSIGSLRKLETLT 751

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK--LPEEIGNLESLEYLNLAE------- 590
           L +C  L ++ +++ NL+SLRRL++ GC +L+   L   +  L+SLE L L E       
Sbjct: 752 LDHCKSLSNLPNKVANLRSLRRLHIYGCTQLDASNLHILVNGLKSLETLKLEECRNLFEI 811

Query: 591 -----------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
                             D E + +S+K LSKL  L L +C+RL SLPELP     ++A 
Sbjct: 812 PDNINLLSSLRELLLKGTDIESVSASIKHLSKLEKLDLSDCRRLYSLPELPQSIKELYAI 871

Query: 633 HCTSLKTL 640
           +C+SL+T+
Sbjct: 872 NCSSLETV 879


>gi|224127754|ref|XP_002329169.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870950|gb|EEF08081.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1125

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 275/701 (39%), Positives = 382/701 (54%), Gaps = 101/701 (14%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P  K+DVFLSFRG+D R  FVSHL AAL R++I TFID KLNRG EISPSL  AIE SK+
Sbjct: 11  PQEKYDVFLSFRGEDTRVCFVSHLYAALKRKQISTFIDYKLNRGEEISPSLLKAIEDSKL 70

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPS----- 121
           S+V+FS+ YASS+WCL EL KILE K   GQ+V+PVFY VDPS        +  +     
Sbjct: 71  SVVVFSDNYASSKWCLEELAKILECKKVKGQMVIPVFYRVDPSHVRNQTGSFADAFARHD 130

Query: 122 ----------LGWMGIFDIPT-----------SESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                     L W                   SES  ++  V DI  KL     S +   
Sbjct: 131 QLLKEKMEKVLNWRAAMREAANLSGWDSHNIKSESEFVDDIVRDILNKLHQTSMSTHHTS 190

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           L+G+++ IK++E+ L   S +   VGIWG+GGIGKTTIA A+Y N+S+ FEG  F+ N+R
Sbjct: 191 LIGIDARIKKVETLLKMESQDVRIVGIWGMGGIGKTTIAKAVYDNVSAQFEGFLFVANVR 250

Query: 221 DESEK---VGGLANIH--------LN---------FERRRLSRMKVLIVFYDLTDLKQID 260
           +E ++   VG   NI         LN         F   RL R KVLIV  D+   +Q++
Sbjct: 251 EEIKRHSVVGLQKNILPELLDQDILNTGPLSFGNAFVMDRLLRKKVLIVLDDVDSSRQLE 310

Query: 261 LLIGRLD-GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            L+      F PGS++++T+RD Q+L N     V  +++V+ L+++++L LF+  AF   
Sbjct: 311 ELLPEPHVSFGPGSKILLTSRDKQVLTN----VVDEIYDVERLNHHEALQLFNMKAFKNY 366

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           +P     EL   ++ YA G PLAL VLGS L G S+EEW S +NKL ++   +IQ VL++
Sbjct: 367 NPTIDHSELVEKIVDYAQGNPLALIVLGSALYGRSKEEWCSVLNKLGKVSSREIQNVLRI 426

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           SYDGLDDE+Q IFLD A FF G ++  V   LD C  +A + IS L  KSL+T     + 
Sbjct: 427 SYDGLDDEQQEIFLDLAFFFNGANRDRVTKILDGCYSAACLDISVLFEKSLITTPGCTVN 486

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD-------- 489
           MHD L+EM   IVR+ES K PGKRSRL  PED+YQ L   + T    GI LD        
Sbjct: 487 MHDSLREMAFSIVREES-KIPGKRSRLCDPEDVYQALVKKKGTEAVEGICLDISESREMH 545

Query: 490 ---------------------SLKELYLGGCSNLKRFPE-----ISCNIEDLDLKETAIE 523
                                SL E+++    +    P      +S  +  L      ++
Sbjct: 546 LKSDAFSRMDRLRILKFFNHFSLDEIFIMDNKDKVHLPHSGLDYLSDELRYLHWDGFPLK 605

Query: 524 ELPSSIG--NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
            LP S    N+  L+  D    S ++ + + + +L  LRR++LSG   L ++P ++   E
Sbjct: 606 TLPQSFCAENIVELIFPD----SKIEKLWTGVQDLVHLRRMDLSGSPYLLEIP-DLSMAE 660

Query: 582 SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           ++E +NL   K   ++  S++ L+KL  L+L  C  L+SLP
Sbjct: 661 NIESINLKFCKSLIEVNPSIQYLTKLEVLQLSYCDNLRSLP 701



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 108/195 (55%), Gaps = 17/195 (8%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           D+Y  +N         N   L+++ L  C+N+ +FPEIS NI+ L L+ TAIEE+PSSI 
Sbjct: 713 DLYHCINVRICPAISGNSPVLRKVDLQFCANITKFPEISGNIKYLYLQGTAIEEVPSSIE 772

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
            L+ LV L +TNC  L S+ S +C LKSL  L LSGC KLE  PE +  +ESL  L L  
Sbjct: 773 FLTALVRLYMTNCKQLSSIPSSICKLKSLEVLGLSGCSKLENFPEIMEPMESLRRLELDA 832

Query: 591 KDFEKIPSSMKQLSKLSDLRL---------QNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
              +++PSS+K L  L+ L+L          +  +L+SL  L  G        T++K L 
Sbjct: 833 TAIKELPSSIKYLKFLTQLKLGVTAIEELSSSIAQLKSLTHLDLGG-------TAIKELP 885

Query: 642 NSSTLLTRSSKHWDI 656
           +S   L +  KH D+
Sbjct: 886 SSIEHL-KCLKHLDL 899



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 87/172 (50%), Gaps = 32/172 (18%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLK--ETAIEELPSSIGNLSRLV 536
           L TG+ +L  L+ + L G   L   P++S   NIE ++LK  ++ IE  PS I  L++L 
Sbjct: 629 LWTGVQDLVHLRRMDLSGSPYLLEIPDLSMAENIESINLKFCKSLIEVNPS-IQYLTKLE 687

Query: 537 DLDLTNCSGLKSVSSRL------------------C-----NLKSLRRLNLSGCLKLEKL 573
            L L+ C  L+S+ SR+                  C     N   LR+++L  C  + K 
Sbjct: 688 VLQLSYCDNLRSLPSRIGSKVLRILDLYHCINVRICPAISGNSPVLRKVDLQFCANITKF 747

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           PE  GN   ++YL L     E++PSS++ L+ L  L + NCK+L S+P   C
Sbjct: 748 PEISGN---IKYLYLQGTAIEEVPSSIEFLTALVRLYMTNCKQLSSIPSSIC 796



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 72/163 (44%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL----------------------- 515
           +S+P+ I  L SL+ L L GCS L+ FPEI   +E L                       
Sbjct: 789 SSIPSSICKLKSLEVLGLSGCSKLENFPEIMEPMESLRRLELDATAIKELPSSIKYLKFL 848

Query: 516 --------------------------DLKETAIEELPSSIGNL----------------- 532
                                     DL  TAI+ELPSSI +L                 
Sbjct: 849 TQLKLGVTAIEELSSSIAQLKSLTHLDLGGTAIKELPSSIEHLKCLKHLDLSGTGIKELP 908

Query: 533 ---SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
              S L  LD+ +C  L+++S    NL++ + LN + C KL++
Sbjct: 909 ELPSSLTALDVNDCKSLQTLSR--FNLRNFQELNFANCFKLDQ 949


>gi|359493406|ref|XP_002279885.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1351

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 281/752 (37%), Positives = 392/752 (52%), Gaps = 127/752 (16%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VFLSFRG+D R  F  HL   L    I TF DD+L RG EI   L   IE S+IS+V+F
Sbjct: 21  EVFLSFRGEDTRTIFTDHLFVNLGGRGINTFRDDQLERGEEIKSELLKTIEESRISVVVF 80

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG------------ 123
           S  YA S+WCL+EL KI+E + +  QIV+PVFY VDPSD      S G            
Sbjct: 81  SRNYAHSKWCLDELAKIMECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVDE 140

Query: 124 -----WMGIFDIPTS-----------ESVLIEGNVNDISKKLS-DLFPSDNKDQLVGVES 166
                W  +F    S           ES+ IE   N+I K+L+  L   D  D +VG++ 
Sbjct: 141 KKVQRWR-VFLTEASNLSGFHVNDGYESMHIEEITNEILKRLNPKLLHID--DDIVGIDF 197

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            +K+++  L     +   VGI+G GGIGKTTIA  +Y+ I   F G+ F+Q++++ S+  
Sbjct: 198 RLKKLKLLLSGHLNDVRVVGIYGTGGIGKTTIAKIVYNEIQCQFSGASFLQDVKERSKNG 257

Query: 227 GGLA-------------------NIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
             L                    N  +N  + RL   K+LIV  D+  LKQ++ L     
Sbjct: 258 CQLELQKQLLRGILGKDIAFSDINEGINIIQGRLGSKKILIVIDDVDHLKQLESLAKSPK 317

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F PGSR+IITTRD  LL  +    V   + V EL Y ++L LFSR AF QN P   +++
Sbjct: 318 WFGPGSRIIITTRDQHLLGEYG---VNIPYRVTELHYKEALQLFSRYAFKQNVPKEDYVD 374

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
            SN ++ YA G+PLAL+VLGS L GM+ +EW SA+++LK+ P  +I  VL++S+DGLD+ 
Sbjct: 375 FSNCMVDYAQGLPLALKVLGSSLHGMTIDEWRSALDRLKKNPVKEINDVLRISFDGLDNL 434

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           E+++FLD A FFK   +  V   LD C   A  GI+ L  K L+TIS+N I MHDL+++M
Sbjct: 435 EKDVFLDIAWFFKKECKDFVSRILDGCNLFATHGITILHDKCLITISDNIIQMHDLIRQM 494

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-----------------------TSLPT 484
           G  IVR E   DP K SRLW  +DIY   +                         +S+P 
Sbjct: 495 GWAIVRDEYPGDPSKWSRLWDVDDIYDAFSRQEFLGKLKVIDLSDSKQLVKMPKFSSMPN 554

Query: 485 --GINLD---SLKELY-------------LGG-----------------------CSNLK 503
              +NL+   SL+EL+             LGG                       C NLK
Sbjct: 555 LERLNLEGCISLRELHLSIGDLKRLTYLNLGGCEQLQSFPPGMKFESLEVLYLDRCQNLK 614

Query: 504 RFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
           +FP+I  N   +++L L ++ I+ELPSSI  L+ L  L+L+NCS L+       N+K LR
Sbjct: 615 KFPKIHGNMGHLKELYLNKSEIKELPSSIVYLASLEVLNLSNCSNLEKFPEIHGNMKFLR 674

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
            L+L GC K EK  +    +E L  L+L E   +++PSS+  L  L  L L  C + +  
Sbjct: 675 ELHLEGCSKFEKFSDTFTYMEHLRGLHLGESGIKELPSSIGYLESLEILDLSYCSKFEKF 734

Query: 621 PE----LPCGSSIHARHCTSLKTLSNSSTLLT 648
           PE    + C   ++  + T++K L NS   LT
Sbjct: 735 PEIKGNMKCLKELYLDN-TAIKELPNSMGSLT 765



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 107/175 (61%), Gaps = 9/175 (5%)

Query: 478  ENTS---LPTGIN-LDSLKELYLGGCSNLKRFPEISC-NIEDLDLKETAIEELPSSIGNL 532
            ENT+   LP GI  L +L+ L L GCSN +RFPEI    +  L L ET I+ELP SIG+L
Sbjct: 844  ENTAIKELPNGIGCLQALESLALSGCSNFERFPEIQMGKLWALFLDETPIKELPCSIGHL 903

Query: 533  SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
            +RL  LDL NC  L+S+ + +C LKSL RL+L+GC  LE   E   ++E LE+L L E  
Sbjct: 904  TRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETG 963

Query: 593  FEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
              ++PS +  L  L  L L NC+ L +LP     L C +++  R+CT L+ L ++
Sbjct: 964  ITELPSLIGHLRGLESLELINCENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDN 1018



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 31/190 (16%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLP  I  L SL+ L L GCSNL+ F EI+ ++E L+   L+ET I ELPS IG+L  L 
Sbjct: 919  SLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLE 978

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES-------------- 582
             L+L NC  L ++ + + +L  L  L +  C KL  LP+ + +L+               
Sbjct: 979  SLELINCENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLME 1038

Query: 583  ------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH 630
                        L  L+++E     IP+ + QLSKL  L + +C  L+ + E+P   ++ 
Sbjct: 1039 GEIPSDLWCLSLLVSLDVSENHIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVM 1098

Query: 631  ARH-CTSLKT 639
              H C SL+T
Sbjct: 1099 EAHGCPSLET 1108



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 110/238 (46%), Gaps = 59/238 (24%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           S P G+  +SL+ LYL  C NLK+FP+I  N   +++L L ++ I+ELPSSI  L+ L  
Sbjct: 592 SFPPGMKFESLEVLYLDRCQNLKKFPKIHGNMGHLKELYLNKSEIKELPSSIVYLASLEV 651

Query: 538 LDLTNCS-----------------------------------------------GLKSVS 550
           L+L+NCS                                               G+K + 
Sbjct: 652 LNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKFEKFSDTFTYMEHLRGLHLGESGIKELP 711

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
           S +  L+SL  L+LS C K EK PE  GN++ L+ L L     +++P+SM  L+ L  L 
Sbjct: 712 SSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEILS 771

Query: 611 LQNCKRLQSLPELPCG----SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           L+ C + +   ++         ++ R  + +K L NS   L    +  +I N S CSN
Sbjct: 772 LKECLKFEKFSDIFTNMGLLRELYLRE-SGIKELPNSIGYL----ESLEILNLSYCSN 824



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 34/212 (16%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           LP+ I  L+SL+ L L  CS  ++FPEI  N   +++L L  TAI+ELP+S+G+L+ L  
Sbjct: 710 LPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEI 769

Query: 538 LDLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           L L  C                       SG+K + + +  L+SL  LNLS C   +K P
Sbjct: 770 LSLKECLKFEKFSDIFTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFP 829

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC 634
           E  GNL+ L+ L L     +++P+ +  L  L  L L  C   +  PE+  G  + A   
Sbjct: 830 EIQGNLKCLKELCLENTAIKELPNGIGCLQALESLALSGCSNFERFPEIQMG-KLWALFL 888

Query: 635 --TSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
             T +K L  S   LTR    W   +  NC N
Sbjct: 889 DETPIKELPCSIGHLTRLK--W--LDLENCRN 916


>gi|356554611|ref|XP_003545638.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 284/768 (36%), Positives = 417/768 (54%), Gaps = 119/768 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS+ SS   +   K+DVF+SFRG+D R +F SHL+AAL R  I+T+ID ++++G+EI  
Sbjct: 71  MASTCSSSFSVTK-KYDVFISFRGEDTRADFTSHLHAALRRNNIDTYIDYRIHKGDEIWV 129

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
            +  AI+ S + +VIFSE YASS WCLNEL++++E K      V+PVFY +DPS+     
Sbjct: 130 EIMKAIKESTLFLVIFSENYASSSWCLNELIQLMEYKKHEDVDVIPVFYKIDPSEVRKQS 189

Query: 116 AGYCPSLG---------------WMGIF-----------DIPTSESVLIEGNVNDISKKL 149
             Y  +                 W               D   +ES +IE  +  I +KL
Sbjct: 190 GSYHMAFAKHEKDRKVTEDKMQKWKNALYEAANLSGFLSDAYRTESNMIEDIIKVILQKL 249

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
           +  +P+D + Q V  E+    IES L   S E   +GIWG+GGIGKTTIA  I+  ISS 
Sbjct: 250 NHKYPNDFRGQFVSDENY-ASIESLLKIDSEEVRVIGIWGMGGIGKTTIAEVIFHKISSR 308

Query: 210 FEGSYFMQNIRDESEKVGG------------LANIHLNFER-------RRLSRMKVLIVF 250
           +EGS F++N+ +ES++ G               ++H++  +       RRL R KVLIV 
Sbjct: 309 YEGSSFLKNVAEESKRHGLNYICKELLSKLLREDLHIDTPKVIPSIITRRLKRKKVLIVL 368

Query: 251 YDLTDLKQIDLLIGR-LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
            D+   + ++ L+G   D    GSRVI+TTRD  ++    G  V  + EVK++++ +SL 
Sbjct: 369 DDVNTSELLENLVGVGRDWLGAGSRVIVTTRDKHVI---MGEVVDKIHEVKKMNFQNSLE 425

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS NAFG+ +P  G+ ELS   + YA G+PLAL+VLGS L+  SE EW+SA++KLK++P
Sbjct: 426 LFSLNAFGKTYPQKGYEELSKRAMGYAKGIPLALKVLGSLLRSRSENEWDSALSKLKKIP 485

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           + +IQ V ++SY+GLDD+E+NIFLD  CFFKG  +  V   L+ C FSA IGI  L+ K+
Sbjct: 486 NPEIQAVFRLSYEGLDDDEKNIFLDITCFFKGQRRDRVTKILNDCNFSADIGIRSLLDKA 545

Query: 430 LVTIS--NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTG 485
           L+TI+  +N I MHDL++EMG E+VR+ES+K+PG+RSRLW PE++  +L  N  T    G
Sbjct: 546 LITITSDSNCIDMHDLIREMGREVVREESMKNPGQRSRLWDPEEVIDILTNNGGTDTVEG 605

Query: 486 INLDSLKELYLGGCSN-LKRFPEISC---------------------------NIEDLDL 517
           I LD  +  Y+   S   ++ P +                             N+  L  
Sbjct: 606 IWLDMTQISYINLSSKAFRKMPNMRLLAFQSPKGEFERINSVYLPKGLEFLPKNLRYLGW 665

Query: 518 KETAIEELPSS----------------------IGNLSRLVDLDLTNCSGLKSVSSRLCN 555
               +E LPSS                      + NL  L  +DL     L     +L +
Sbjct: 666 NGYPLESLPSSFCPEKLVELSMPYSNLEKLWHGVQNLPNLERIDLHGSKHLMEC-PKLSH 724

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
             +L+ +++ GC  L  + E I +L  LE LN++      +P S+K L KL  L +  CK
Sbjct: 725 APNLKYVSMRGCESLPYVDESICSLPKLEILNVS-----GLPESIKDLPKLKVLEVGECK 779

Query: 616 RLQSLPELPCGSSIH-ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           +LQ +P LP         +C SL+T+ +S+  +  S +   +F   NC
Sbjct: 780 KLQHIPALPRSLQFFLVWNCQSLQTVLSST--IESSKRPNCVFLLPNC 825


>gi|356497765|ref|XP_003517729.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1135

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 284/736 (38%), Positives = 405/736 (55%), Gaps = 101/736 (13%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPS 61
           ASSSS +  +   ++DVFLSFRG+D R    SHL  AL + ++ T+ID +L +G+EIS +
Sbjct: 10  ASSSSCVASLK--RYDVFLSFRGEDTRKIITSHLYHALFQAELATYIDYRLQKGDEISQA 67

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------ 115
           L  AIE S++S++IFSE YA+S+WCL+E+ KI+E K   GQ+V+PVFY +DPS       
Sbjct: 68  LIEAIEESQVSVIIFSEKYATSKWCLDEITKIIECKEGQGQVVIPVFYKIDPSHIRKQQG 127

Query: 116 --------------------AGYCPSL-------GWMGIFDIPTSESVLIEGNVNDISKK 148
                                 +  +L       GW   F    +E+  I+  V D+  K
Sbjct: 128 SFKQAFVEHEQDLKITTDRVQKWREALTKAANLAGWD--FQTYRTEAEFIKDIVKDVLLK 185

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L+ ++P + K  L+G+E     IES L   S +   +GIWG+GGIGKTT+A+A+Y+ + S
Sbjct: 186 LNLIYPIELKG-LIGIEGNYTRIESLLKIDSRKVRVIGIWGMGGIGKTTLATALYAKLFS 244

Query: 209 HFEGSYFMQNIRDESEKVG---------------------GLANIHLNFERRRLSRMKVL 247
            FEG  F+ N+R+++EK G                      +  +  +F  RRL R KV 
Sbjct: 245 RFEGHCFLGNVREQAEKQGLDFLRTKLFSELLPGENHLHENMPKVEYHFITRRLKRKKVF 304

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+   +Q++ LI   + F PGSRVI+TTRD      H  S V  ++EVKEL+  DS
Sbjct: 305 LVLDDVASSEQLEDLIDDFNCFGPGSRVIVTTRD-----KHIFSYVDEIYEVKELNDLDS 359

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LF  NAF + HP  GF ELS  VI Y  G PLAL+VLG+ L+  SE+ W   + KL++
Sbjct: 360 LQLFCLNAFREKHPKNGFEELSESVIAYCKGNPLALKVLGARLRSRSEQAWYCELRKLQK 419

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
           +P++ I  VLK+S+D LD  EQ IFLD ACFFKG  +  +++ L+AC F   IGI  L  
Sbjct: 420 IPNVKIHNVLKLSFDDLDHTEQEIFLDIACFFKGEYRDHIISLLEACNFFPAIGIEVLAD 479

Query: 428 KSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPT 484
           KSL+TIS  + I MHDL+QEMG  IV QESIKDPGKRSRLW PE+++ VL  N  T    
Sbjct: 480 KSLITISPEDTIEMHDLIQEMGWNIVHQESIKDPGKRSRLWDPEEVFDVLKYNRGTEAIE 539

Query: 485 GINLD--SLKELYLGGCSNLK----RF---------------------PEISCNIEDLDL 517
           GI LD   +++L+L   S  K    RF                       +S  +  L  
Sbjct: 540 GIILDLSKIEDLHLSFDSFTKMTNVRFLKFYYGKWSSKGKIYLPKNGLKSLSDKLRHLQW 599

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
               +E LPS+  +   LV+L +   S L+ +   + NL +L+ ++L  C  L ++P+ +
Sbjct: 600 HGYCLESLPSTF-SAKFLVEL-VMPYSNLQKLWDGVQNLVNLKDIDLRYCENLVEVPD-L 656

Query: 578 GNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARH 633
               +LE L+L++ K   ++  S+  L KL  L L+ C  +QSL     L     +   +
Sbjct: 657 SKATNLEDLSLSQCKSLRQVHPSILSLPKLQSLDLEGCIEIQSLQSDVHLESLQDLRLSN 716

Query: 634 CTSLKTLSNSSTLLTR 649
           C+SLK  S  S  L R
Sbjct: 717 CSSLKEFSVMSVELRR 732



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 30/192 (15%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           E  SL + ++L+SL++L L  CS+LK F  +S  +  L L  T I+ELP+SI   ++L  
Sbjct: 696 EIQSLQSDVHLESLQDLRLSNCSSLKEFSVMSVELRRLWLDGTHIQELPASIWGCTKLKF 755

Query: 538 LDLTNC------------------------SGLKSVSSR-----LCNLKSLRRLNLSGCL 568
           +D+  C                        SG K +++      L  ++SL  L L  C 
Sbjct: 756 IDVQGCDNLDGFGDKLSYDPRTTCFNSLVLSGCKQLNASNLDFILVGMRSLTSLELENCF 815

Query: 569 KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
            L  LP+ IG L SL+ L L+  + E +P+S++ L KL  L L +C +L SLPELP    
Sbjct: 816 NLRTLPDSIGLLSSLKLLKLSRSNVESLPASIENLVKLRRLYLDHCMKLVSLPELPESLW 875

Query: 628 SIHARHCTSLKT 639
            + A +C SL T
Sbjct: 876 LLSAVNCASLVT 887



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 42/194 (21%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA----------------------- 521
           NL +LK++ L  C NL   P++S   N+EDL L +                         
Sbjct: 635 NLVNLKDIDLRYCENLVEVPDLSKATNLEDLSLSQCKSLRQVHPSILSLPKLQSLDLEGC 694

Query: 522 --IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
             I+ L S + +L  L DL L+NCS LK  S        LRRL L G   +++LP  I  
Sbjct: 695 IEIQSLQSDV-HLESLQDLRLSNCSSLKEFSVMSV---ELRRLWLDGT-HIQELPASIWG 749

Query: 580 LESLEYLNLAEKD----FEKIPSSMKQLSKLSDLRLQNCKRLQS------LPELPCGSSI 629
              L+++++   D    F    S   + +  + L L  CK+L +      L  +   +S+
Sbjct: 750 CTKLKFIDVQGCDNLDGFGDKLSYDPRTTCFNSLVLSGCKQLNASNLDFILVGMRSLTSL 809

Query: 630 HARHCTSLKTLSNS 643
              +C +L+TL +S
Sbjct: 810 ELENCFNLRTLPDS 823


>gi|359486071|ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 230/539 (42%), Positives = 320/539 (59%), Gaps = 61/539 (11%)

Query: 13  HP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           HP K++VFLSFRG+D R +F  HL+ AL R  I  FIDD+L RG +IS +L  AIE S+ 
Sbjct: 17  HPWKYEVFLSFRGEDTRKSFTDHLHKALRRCGIHAFIDDRLRRGEQISSALLRAIEESRF 76

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG--- 123
           SI+IFSE YASS WCL+EL KIL+   +      PVFY VDPS     +  Y  +     
Sbjct: 77  SIIIFSEHYASSSWCLDELTKILQCVKEGRHTAFPVFYNVDPSHVRKQEGSYGVAFTKHE 136

Query: 124 ------------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                       W     + ++          ES +I+  V+ I KKL+D   S N + L
Sbjct: 137 QVYRDNMEKVVEWRKALTVASNLSGWDSRDKHESEVIKEIVSKIWKKLNDA-SSCNMEAL 195

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ S I+ + S L  GS +   VGIWG+ GIGKTTIA A+Y  I + FEG  F+ N+R+
Sbjct: 196 VGMASHIQNMVSLLRIGSDDVRMVGIWGMAGIGKTTIAEAVYQKIRTRFEGCCFLSNVRE 255

Query: 222 ESEKVG--------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           +S+K                      G+ +  +N   + L  M+VLIV  D+   +Q+++
Sbjct: 256 KSQKNDPAVIQMELLSQIFEEGNLNTGVLSGGINVIEKTLHSMRVLIVLDDVDCPQQLEV 315

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  + F PGSR+IITTR+  LL          ++  KEL+ +++  LF ++AF    P
Sbjct: 316 LAGNHNWFSPGSRIIITTREKHLLDEKV-----EIYVAKELNKDEARKLFYQHAFKYKPP 370

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              F++L +  + Y  G+PLAL++LG +L   S++EWES + KL+R+P+ +IQ VL++S+
Sbjct: 371 VGDFVQLCDRALNYTKGIPLALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISF 430

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGLDD +++IFLD ACFFKG D+  V+  L +C F  +I I  L+ KSLVTIS NK+ MH
Sbjct: 431 DGLDDNQKDIFLDIACFFKGQDKDYVIKLLKSCDFFPEIEIRNLIDKSLVTISYNKLCMH 490

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYL 496
           DL+QEMG EIVRQESIKDPGKRSRLW  +D+  +L  NT         +NL +LKEL+ 
Sbjct: 491 DLIQEMGWEIVRQESIKDPGKRSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTLKELHF 549



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 28/208 (13%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
             SLP  I  L SL+ L L GCS LK+ P+    + C ++ L    T I+E+P+SI  L++
Sbjct: 850  ASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVK-LKANGTGIQEVPTSITLLTK 908

Query: 535  LVDLDLTNCSGLKSVS-----------------SRLCNLKSLRRLNLSGCLKLE-KLPEE 576
            L  L L  C G +S S                 S L  L SLR+LNLSGC  LE  LP +
Sbjct: 909  LEVLSLAGCKGGESKSRNLALCLRSSPTKGLRPSFLPVLYSLRKLNLSGCNLLEGALPSD 968

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
            + +L  LE L+L+   F  +P+ + +L +L  L L++CK L+SLPELP     + A  CT
Sbjct: 969  LSSLSWLECLDLSRNSFITVPN-LSRLPRLKRLILEHCKSLRSLPELPSNIEKLLANDCT 1027

Query: 636  SLKTLSN-SSTLLTRSSKHWDIFNFSNC 662
            SL+T SN SS    R+S+H + F F NC
Sbjct: 1028 SLETFSNPSSAYAWRNSRHLN-FQFYNC 1054



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 104/166 (62%), Gaps = 10/166 (6%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+L+SL+ + L GCS LK+FPE+     N+ +L LK TAI+ LP SI  L+ L  
Sbjct: 710 SFSSSIHLESLQTITLSGCSKLKKFPEVQGAMDNLPELSLKGTAIKGLPLSIEYLNGLSL 769

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C  L+S+   +  LKSL+ L LS C +L+KLPE   N+ESL+ L L +    ++P
Sbjct: 770 LNLEECKSLESLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELP 829

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNS 643
           SS++ L+ L  L+L+NCK+L SLPE  C         TSL+TL+ S
Sbjct: 830 SSIEHLNGLVLLKLKNCKKLASLPESIC-------KLTSLQTLTLS 868



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 85/139 (61%), Gaps = 4/139 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP  I  L SLK L L  CS LK+ PEI  N+E L    L +T + ELPSSI +L+ LV
Sbjct: 780 SLPGCIFKLKSLKTLILSNCSRLKKLPEIQENMESLKKLFLDDTGLRELPSSIEHLNGLV 839

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L L NC  L S+   +C L SL+ L LSGC +L+KLP+++G+L+ L  L       +++
Sbjct: 840 LLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLKANGTGIQEV 899

Query: 597 PSSMKQLSKLSDLRLQNCK 615
           P+S+  L+KL  L L  CK
Sbjct: 900 PTSITLLTKLEVLSLAGCK 918



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 5/125 (4%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           T++ ++  SIG L +L+ L+L  C  LKS SS + +L+SL+ + LSGC KL+K PE  G 
Sbjct: 682 TSLVKVHPSIGALKKLIFLNLEGCKNLKSFSSSI-HLESLQTITLSGCSKLKKFPEVQGA 740

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCT 635
           +++L  L+L     + +P S++ L+ LS L L+ CK L+SLP    +L    ++   +C+
Sbjct: 741 MDNLPELSLKGTAIKGLPLSIEYLNGLSLLNLEECKSLESLPGCIFKLKSLKTLILSNCS 800

Query: 636 SLKTL 640
            LK L
Sbjct: 801 RLKKL 805



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 33/65 (50%)

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           LRR+ L GC  L K+   IG L+ L +LNL      K  SS   L  L  + L  C +L+
Sbjct: 673 LRRIILEGCTSLVKVHPSIGALKKLIFLNLEGCKNLKSFSSSIHLESLQTITLSGCSKLK 732

Query: 619 SLPEL 623
             PE+
Sbjct: 733 KFPEV 737


>gi|357454621|ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355486639|gb|AES67842.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1169

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 290/803 (36%), Positives = 408/803 (50%), Gaps = 174/803 (21%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSK 70
           +P  K+DVF+SFRG D+RH F+SHL   L +++++ ++DD+L  G+EIS +L  AIEGS 
Sbjct: 9   VPPVKYDVFISFRGTDIRHGFLSHLRKELRQKQVDAYVDDRLEGGDEISKALVKAIEGSL 68

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG-- 123
           +S++IFS+ YASS+WCL ELVKI+E   +  Q+V+PVFY V+P+D       Y  SL   
Sbjct: 69  MSLIIFSKDYASSKWCLEELVKIVECMARNKQVVIPVFYNVNPTDVRHQKGTYGDSLAKH 128

Query: 124 ------------WMGIFDIPTS----------------------ESVLIEGNVNDISKKL 149
                       W     I  +                      E  LIE  V  +S KL
Sbjct: 129 EKNKGSLAKVRNWGSALTIAANLSGFHSSKYGREARGRGAELADEVELIEEIVKCLSSKL 188

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           + ++ S+  D LVG+E  I ++ES L L  + +   +GIWG+GGIGKTT+A+A+Y+ +  
Sbjct: 189 NLMYQSELTD-LVGIEERIADLESLLCLDSTADVLVIGIWGMGGIGKTTLAAAVYNRLCF 247

Query: 209 HFEGSYFMQNIRDESEKVGGLA-------------NIHLN-------FERRRLSRMKVLI 248
            +EGS FM NI +ESEK G +              ++H+        + +RRL+R KVL+
Sbjct: 248 EYEGSCFMANITEESEKHGMIYLKNKILSILLKENDLHIGTPIGVPPYVKRRLARKKVLL 307

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  D+ DL+ ++ L+G LD F  GSR+I+TTRD Q+L    G RV   +E K L  +D++
Sbjct: 308 VLDDINDLEHLENLVGGLDWFGSGSRIIVTTRDKQVL----GKRVNCTYEAKALQSDDAI 363

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            LF  NAF        ++ELS  VI YANG PLAL+VLGS+L G S+ EWES + KLK+M
Sbjct: 364 KLFIMNAFEHGCLDMEWIELSRRVIHYANGNPLALKVLGSFLYGKSKIEWESQLQKLKKM 423

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
           PH  IQ VL++SYD LD EE+NIFL  AC  KG +   ++  LDAC FS  IG+  L  K
Sbjct: 424 PHAKIQNVLRLSYDRLDREEKNIFLYIACLLKGYEVQQIIALLDACGFSTIIGLRVLKDK 483

Query: 429 SLVTISNNK----ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT 484
           +L+  +       ++MHDL+QEMG EIVR+E ++DPGKRSRLW P D++QVL  NT    
Sbjct: 484 ALIIEAKGSGRSIVSMHDLIQEMGWEIVREECVEDPGKRSRLWDPNDVHQVLTNNTGTKA 543

Query: 485 ----GINLDSLKELYLG-----------------------------GCSN---------- 501
                +N+    EL+L                              G  +          
Sbjct: 544 IKSITLNVSKFDELHLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLPNDLLLFQW 603

Query: 502 ----LKRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLT-------------- 541
               LK  P+  C  N+ +L L  + +E+L   I N+  L  +DL+              
Sbjct: 604 VSYPLKSLPQSFCAENLVELKLTWSRVEKLWDGIQNIQHLKKIDLSYSKYLLDLPDFSKA 663

Query: 542 ---------NCSGLKSVSSRLCNLKSLRRLN-----------------------LSGCLK 569
                     C  L +V   +  L  L RLN                       LSGC +
Sbjct: 664 SNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYCKALTSLRSDTHLRSLRDLFLSGCSR 723

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPC 625
           LE       N++ L    L+     ++PSS+  L  L  L L  CK L  LP    +L  
Sbjct: 724 LEDFSVTSDNMKDLA---LSSTAINELPSSIGSLKNLETLTLDFCKSLNKLPNEVIDLRS 780

Query: 626 GSSIHARHCTSLKTLSNSSTLLT 648
             +++   CT L   SN   LL+
Sbjct: 781 LRALYVHGCTQLDA-SNLHILLS 802



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 114/215 (53%), Gaps = 31/215 (14%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           TSL +  +L SL++L+L GCS L+ F   S N++DL L  TAI ELPSSIG+L  L  L 
Sbjct: 702 TSLRSDTHLRSLRDLFLSGCSRLEDFSVTSDNMKDLALSSTAINELPSSIGSLKNLETLT 761

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK--LPEEIGNLESLEYLNL--------- 588
           L  C  L  + + + +L+SLR L + GC +L+   L   +  L SLE L L         
Sbjct: 762 LDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSGLASLETLKLEECRNLSEI 821

Query: 589 ---------------AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
                           E D E+ P+S+K LSKL  L ++ C+RLQ++PELP     ++A 
Sbjct: 822 PDNISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVKGCRRLQNMPELPPSLKELYAT 881

Query: 633 HCTSLKTLS---NSSTLLTRSSKHWDIFNFSNCSN 664
            C+SL+T+    N+S LL   +       F NC N
Sbjct: 882 DCSSLETVMFNWNASDLLQLQAYKLHT-QFQNCVN 915


>gi|357468503|ref|XP_003604536.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505591|gb|AES86733.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1088

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 286/808 (35%), Positives = 402/808 (49%), Gaps = 173/808 (21%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           ++S  SS+++    ++DVF+SFRG+D+R NF+SHL     R+KI+ F+DDKL RG+EI  
Sbjct: 57  ISSQFSSVSINATTQYDVFVSFRGEDIRANFLSHLIEDFDRKKIKAFVDDKLKRGDEIPQ 116

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
           SL  AIEGS IS++IFS  YASS WCL ELV  L+ + KYGQIV+P+FY VDP+D  Y  
Sbjct: 117 SLVRAIEGSLISLIIFSHDYASSCWCLEELVTTLQCREKYGQIVIPIFYQVDPTDVRYQN 176

Query: 121 SLGWMGIFDIP---TSESVLIEGNVNDISKKLSDLFPSD-------------------NK 158
                   ++    +S  V I  +  + S  LS +  SD                   N 
Sbjct: 177 KSYDNAFVELQRGYSSTKVQIWRHALNKSANLSGIKSSDFRNDVQLLKEIIKCVSINLNN 236

Query: 159 DQLVGVESII------KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
            QLV  + +I        ++S L   S +   VGIWG+GGIGKTT+A  ++  + S +EG
Sbjct: 237 KQLVSSKGLIGIGKQTAHLKSLLSQESEDVRVVGIWGMGGIGKTTLAEEVFHQLQSEYEG 296

Query: 213 SYFMQNIRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDL 253
             F++NIR+ES K G                    +AN   ++ + R+ RMKVLIV  D+
Sbjct: 297 CCFLENIREESAKHGMVFLKEKLISALLDEVVKVDIANRLPHYVKTRIRRMKVLIVLDDV 356

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            D  Q+++L G  D F  GSR+IITTRD Q+L       V  + EV  L Y+ SL LF+ 
Sbjct: 357 NDFDQLEILFGDHDLFGFGSRIIITTRDKQML----SKDVDDILEVGALDYDKSLELFNL 412

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           NAF        + ELS  V+ YA G+PL L+VL   ++G  +  WES ++KL++MP   +
Sbjct: 413 NAFKGKELEIEYNELSKRVVNYAKGIPLVLKVLAHLVRGKDKLVWESQLDKLRKMPSKKV 472

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGND---QYLVMNFLDA-CRFSAKIGISRLVGKS 429
           Q V+++SYD LD EEQ IFLD ACFF G++    YL + + D+    S   G+ RL  K 
Sbjct: 473 QDVMRLSYDDLDREEQKIFLDIACFFNGSNLKVDYLKLLWKDSESDNSVASGLERLKDKD 532

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--------- 479
           LV++S +N I+MH ++Q+MG EIVRQES  DPG RSRLW  +DIY+VL  +         
Sbjct: 533 LVSVSKHNVISMHGIIQDMGREIVRQESSGDPGSRSRLW-DDDIYEVLKNDKGTEEIRSI 591

Query: 480 -TSLPTGINLD----------SLKELYLGGCSN--------------------------- 501
              LPT  NL           +L+ LY+    +                           
Sbjct: 592 WMPLPTLRNLKLSPSTFSKMRNLQFLYVPNVYDQDGFDLLPHGLHSMPPELRYLCWMHYP 651

Query: 502 LKRFP-EISC-NIEDLDLKETAIEELPSSIGNLSRLVD---------------------- 537
           LK  P E S   +  LDL  + +E+L   + NL  L +                      
Sbjct: 652 LKSLPDEFSAEKLVILDLSYSRVEKLWHGVQNLLNLKEVKLFYSRFLKQLPDFSKALNLE 711

Query: 538 -LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK------------------------ 572
            LD+  C  L SV   + +L++L +L+LS C  L +                        
Sbjct: 712 VLDIHFCGQLTSVHPSIFSLENLEKLDLSHCTALTELTSDTHSSSLRYLSLKFCKNIRKF 771

Query: 573 -------------------LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
                              LP   G    LE L+L     E+ PS  K L +L  L ++ 
Sbjct: 772 SVTSENMIELDLQYTQINALPASFGRQTKLEILHLGNCSIERFPSCFKNLIRLQYLDIRY 831

Query: 614 CKRLQSLPELPCGSSI-HARHCTSLKTL 640
           C +LQ+LPELP    + HAR CTSL+++
Sbjct: 832 CLKLQTLPELPQSLEVLHARGCTSLESV 859



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T L +  +  SL+ L L  C N+++F   S N+ +LDL+ T I  LP+S G  ++L  L 
Sbjct: 746 TELTSDTHSSSLRYLSLKFCKNIRKFSVTSENMIELDLQYTQINALPASFGRQTKLEILH 805

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY---LNLAEKDFEKI 596
           L NCS ++   S   NL  L+ L++  CLKL+ LPE   +LE L      +L    F  I
Sbjct: 806 LGNCS-IERFPSCFKNLIRLQYLDIRYCLKLQTLPELPQSLEVLHARGCTSLESVLFPSI 864

Query: 597 PSSMKQ 602
           P   K+
Sbjct: 865 PEQFKE 870


>gi|147768286|emb|CAN64759.1| hypothetical protein VITISV_033530 [Vitis vinifera]
          Length = 1206

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/535 (42%), Positives = 319/535 (59%), Gaps = 58/535 (10%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R +F  HL+  L R+ I+TF DD+L RG +ISP+L  AIE S+ SI+
Sbjct: 22  KYDVFLSFRGEDTRKSFTDHLHRELRRKWIKTFRDDQLRRGEQISPALLKAIEESRFSII 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           IFS+ YASS WCL+EL KIL+     G   +PVFY VDPS                D  Y
Sbjct: 82  IFSKNYASSSWCLDELTKILDCVEVMGHTAIPVFYNVDPSHVRKQTESFAEAFAKHDHIY 141

Query: 119 CPS----LGWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                  L W     + +           E+ +I+  V  I  KL D   S N + LVG+
Sbjct: 142 GDKSEKVLKWRKALTVASGLSGYDSRDRHETEVIDEVVTMIFNKLIDA-SSSNMEGLVGM 200

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF-EGSYFMQNIRDES 223
            S ++++   L  GS +   VGIWG+ GIGK+TIA  +Y+ I + F EG  F+ N+R+ES
Sbjct: 201 GSRLQDMAQLLDIGSVDVRMVGIWGMAGIGKSTIAYQVYNKIYAQFDEGYCFLPNVREES 260

Query: 224 EKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           ++ G                   G  N  +NF + RL   KVLIV  D+   +Q+++L G
Sbjct: 261 QRHGLAYLQEELLSQISGGNLNKGNFNRGINFIKERLHSRKVLIVLDDVDMYEQLEVLAG 320

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F  GSR+IITT+D  LL  H    V  ++ V+ L YN++L LF   AF  + P A 
Sbjct: 321 NHDWFGAGSRIIITTKDKTLLNMH---GVDAIYNVEGLKYNEALKLFCWCAFKHDLPTAD 377

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +++L    +KY  G+PLA++VLGS++K  + +EW+SA++KLKR+PH D+QKVL++S+DGL
Sbjct: 378 YMQLCKNFVKYIEGLPLAIKVLGSFVKNKTIDEWKSALDKLKRIPHKDVQKVLRISFDGL 437

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD +++IFLD ACFFKG D+  V   L++C F     I  L   SL+ +SNNK+ MHBLL
Sbjct: 438 DDNQKDIFLDIACFFKGQDKDFVAKILESCDFFPANDIRVLEENSLILVSNNKLCMHBLL 497

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKELY 495
           QEMG EIVRQE++K PGKRSRLW  +++  VL  NT      G+ LD  + KEL+
Sbjct: 498 QEMGWEIVRQENVKYPGKRSRLWFHDEVNHVLTTNTGTEAVEGLVLDLSASKELH 552



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 7/173 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPE+  N++ L    L ETA+ ELPSSIG L+ LV 
Sbjct: 731 SFASSIHMNSLQILTLSGCSKLKKFPEMLENMKSLRQLLLDETALRELPSSIGRLNGLVL 790

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+LTNC  L S+   LC L SL+ L L+GC +L+KLP+E+G+L  L  LN      +++P
Sbjct: 791 LNLTNCKKLVSLPQSLCKLTSLQILTLAGCSELKKLPDELGSLRCLVNLNADGSGIQEVP 850

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRS 650
            S+  L+ L  L L  CK+   +  L    ++    C  L++L N S++ T S
Sbjct: 851 PSITLLTNLQVLSLAGCKKRNVVFSLWSSPTV----CLQLRSLLNLSSVKTLS 899


>gi|255555349|ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223542092|gb|EEF43636.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1109

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 278/696 (39%), Positives = 381/696 (54%), Gaps = 98/696 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFL+FRG+D R NF SHL+ AL +  I TFID++L RG  +SPSL  AIE SKIS+V
Sbjct: 22  KYDVFLNFRGEDTRINFTSHLHDALLKNNILTFIDNELVRGEALSPSLLKAIEESKISVV 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           I SE Y  S+WCL ELVKILE     GQ+V+PVFY VDPS             A +  SL
Sbjct: 82  ILSENYPYSKWCLEELVKILECMKINGQMVIPVFYKVDPSHVRNQTGSFADAFARHEESL 141

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW      P SE  LI+  + DI +KL+ +  S +    
Sbjct: 142 LVTEDKVKSWRAALKDVANISGWDSRVTSPESE--LIKKIIRDIWEKLNIMSSSYSPRGF 199

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+++ IK+IE  L    ++   VGIWG+GGIGKTT+A AIY  IS  FE S F+ NIR+
Sbjct: 200 VGIQTRIKQIECLLCLKLSDVRIVGIWGMGGIGKTTLARAIYDKISHQFESSCFLSNIRE 259

Query: 222 ESEK--------------------VGGLANIHLNFERRRLSRMKVLIVF--YDLTDLKQI 259
           + E+                         N+ L+F + RL R KVL+V    D     Q 
Sbjct: 260 QLERCTLPQLRDELFSSLLEKEILTPSTLNLRLSFIKDRLCRKKVLVVIDDADSLTQLQE 319

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            LL    D F  GSR+IIT+RD Q+L+N    +   ++ +++L  +++L LFS NAF Q+
Sbjct: 320 LLLESEPDYFGSGSRIIITSRDKQVLRNIARDK---IYTMQKLKNHEALQLFSLNAFKQD 376

Query: 320 HPAAGFLEL-SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           +P +    L S  VIKYA G PLA++VLGS L   SEE+WESA+ +L ++P+ +I  VL+
Sbjct: 377 YPTSDRCILQSERVIKYAKGNPLAIRVLGSALFNRSEEDWESALERLGKIPNKEIDNVLR 436

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
            SYDGLD +EQNIFLD  CFF+G  + LV   LD C  SA I I+ L+ +SL+T+S   +
Sbjct: 437 TSYDGLDSDEQNIFLDIVCFFRGEHRGLVTKILDGCYPSAHIVITTLIDRSLITVSYGYL 496

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLK---E 493
            +HDLLQEMG  IV  ES K P   SRLW PED+  VL EN  T +  GI+LD  K   E
Sbjct: 497 KLHDLLQEMGRNIVLNES-KIPESHSRLWIPEDVCYVLKENKGTEVIEGISLDISKARSE 555

Query: 494 LYLGGCS----------NLKRFPEISCNIEDLDLKETAIEELPSSIGNL----------- 532
           L L   +          NL R P      + L L    ++ LP+ + +L           
Sbjct: 556 LRLRSNTFARMSRLRFLNLYRSPHDRDKKDKLQLSLDGLQTLPTELRHLHWSEFPLKSLP 615

Query: 533 -----SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEY 585
                  LV L L + S LK + + + NL  L+ ++LSG   L ++P+  +  N+E ++ 
Sbjct: 616 SNFTPENLVVLSLPD-SKLKKLWTGIQNLVKLKEIDLSGSEYLYRIPDLSKATNIEKIDL 674

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                +  E++ SS++ L+KL  L +  C  L+ LP
Sbjct: 675 WGC--ESLEEVHSSIQYLNKLEFLDIGECYNLRRLP 708



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 113/229 (49%), Gaps = 48/229 (20%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL---SRLVDL 538
           LP  I+ + LK   +  C  +KR P+   N+E+L+L  TAI ++ ++I ++   S LV L
Sbjct: 707 LPGRIDSEVLKVFKVNDCPRIKRCPQFQGNLEELELDCTAITDVATTISSILISSTLVQL 766

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSG------------------------CLKLEKLP 574
            + NC  L S+ S    LKSL  L+L                          C +L++LP
Sbjct: 767 AVYNCGKLSSLPSSFYKLKSLESLDLDNWSELESFPEILEPMINLEFITLRNCRRLKRLP 826

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIH 630
             I NL+SL YL++     ++IPSS++ L  L+ L+L +CK L+SLP    +LP   ++ 
Sbjct: 827 NSICNLKSLAYLDVEGAAIKEIPSSIEHLILLTTLKLNDCKDLESLPCSIHKLPQLQTLE 886

Query: 631 ARHCTSLKTLS------------NSSTLLTRS---SKHWD--IFNFSNC 662
              C SL++L             N  +L T S   +KH +  I  F+NC
Sbjct: 887 LYSCKSLRSLPEFPLSLLRLLAMNCESLETISISFNKHCNLRILTFANC 935



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 65/164 (39%), Gaps = 45/164 (27%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           L TGI NL  LKE+ L G   L R P++S        K T IE++             DL
Sbjct: 636 LWTGIQNLVKLKEIDLSGSEYLYRIPDLS--------KATNIEKI-------------DL 674

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI----------------------- 577
             C  L+ V S +  L  L  L++  C  L +LP  I                       
Sbjct: 675 WGCESLEEVHSSIQYLNKLEFLDIGECYNLRRLPGRIDSEVLKVFKVNDCPRIKRCPQFQ 734

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           GNLE LE    A  D     SS+   S L  L + NC +L SLP
Sbjct: 735 GNLEELELDCTAITDVATTISSILISSTLVQLAVYNCGKLSSLP 778


>gi|255564962|ref|XP_002523474.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223537302|gb|EEF38933.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1091

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 288/756 (38%), Positives = 403/756 (53%), Gaps = 130/756 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           M   +SS N+ P   +DVFLSFRG D RHN +SHL AAL R+ + TFIDD  L+RG EIS
Sbjct: 1   MPPPTSSSNVPPKTSYDVFLSFRGADTRHNLISHLYAALSRKHVTTFIDDHGLDRGEEIS 60

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L  AIE SKIS++IFSE YASS+WCL+ELVKI+E      + V+PVFY VDPSD    
Sbjct: 61  PTLLKAIEESKISVIIFSENYASSKWCLDELVKIMECMKTMSRNVLPVFYHVDPSDVRKQ 120

Query: 116 -AGYCPSLG---------------WMGIFDIPTS-----------ESVLIEGNVNDISKK 148
              +  + G               W        +           ES LIEG +++I KK
Sbjct: 121 TGSFGQAFGVVKEKFKGSMDRVQRWSTALTEAANLSGWDSNNYRLESELIEGVIDEIIKK 180

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L   F S + D LVG++S I++I   L  GS +   +GIWG+GGIGKTTIA AI+S IS 
Sbjct: 181 LYATFYSISTD-LVGIDSHIEQILLLLCIGSLDVRFIGIWGMGGIGKTTIAEAIFSRISD 239

Query: 209 HFEGSYFMQNIRDESEKVGGLANIHL-----------------------NFERRRLSRMK 245
            F G  F+ N+R++S K+G    IHL                        F   RL R K
Sbjct: 240 QFAGCCFLSNVREKSSKLGL---IHLKRDMYSKLLGDEKLSIEMSHALPTFVVDRLRRKK 296

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           V++   D+ D +Q++ L G    F PGSRVI+T RD ++L+     +V  +++V+ L++N
Sbjct: 297 VIVFLDDVNDSEQLEALAGNHVWFGPGSRVIVTGRDKEVLQ----CKVDEIYKVEGLNHN 352

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           DSL L S  AF +  P   + +LS +V+ YA GVPLAL+VLGS+L   S++EWE+ +NKL
Sbjct: 353 DSLRLLSMKAFKEKQPPNDYAKLSEMVVNYAQGVPLALKVLGSHLYKRSQKEWETMLNKL 412

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           K+ P  +IQK+L++SYD LD  E++IFLD ACFFKG ++  + + L+ C F+A+ GI RL
Sbjct: 413 KQFPDSNIQKILEISYDELDQMEKDIFLDIACFFKGCEKDKIEDILEGCGFAAEWGILRL 472

Query: 426 VGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
             K LVTI NN++ MHDL+QEMG  I ++       K SRLW+ +DI  +L  +      
Sbjct: 473 TEKCLVTIQNNRLEMHDLIQEMGLHIAKR-------KGSRLWNSQDICHMLMTDMGKKKV 525

Query: 485 -GINLD--------------------SLKELY----------------------LGGCSN 501
            GI LD                     L + Y                      L G SN
Sbjct: 526 EGIFLDMSKTGKIRLNHATFSRMPMLRLLKFYRTWSSPRSQDAVFIVKSAESNCLEGLSN 585

Query: 502 ---LKRFPEISC----------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKS 548
              L  + E  C          N+ +L++  + IE+L +      +L  LDL+    LK 
Sbjct: 586 RLSLLHWEEYPCKSLCSNFFMENLVELNMPRSNIEQLWNDNEGPPKLRRLDLSKSVNLKR 645

Query: 549 VSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLS 607
           +   L +  +L  + L GC  L ++P  +   + L  LNL   K+   +P S+ QL  LS
Sbjct: 646 LPD-LSSTTNLTSIELWGCESLLEIPSSVQKCKKLYSLNLDNCKELRSLP-SLIQLESLS 703

Query: 608 DLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNS 643
            L L  C  L+ LP++P G    + H + L+   +S
Sbjct: 704 ILSLACCPNLKMLPDIPRGVKDLSLHDSGLEEWPSS 739



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 1/98 (1%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           E  SLP+ I L+SL  L L  C NLK  P+I   ++DL L ++ +EE PSS+ +L  L  
Sbjct: 689 ELRSLPSLIQLESLSILSLACCPNLKMLPDIPRGVKDLSLHDSGLEEWPSSVPSLDNLTF 748

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
             +  C  L+S+ S L   KSLR ++LSGC  L+ LPE
Sbjct: 749 FSVAFCKNLRSLPS-LLQWKSLRDIDLSGCSNLKVLPE 785



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 88/224 (39%), Gaps = 58/224 (25%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           +I Q+ N+N   P       L+ L L    NLKR P++S                     
Sbjct: 618 NIEQLWNDNEGPP------KLRRLDLSKSVNLKRLPDLS--------------------- 650

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA- 589
           + + L  ++L  C  L  + S +   K L  LNL  C +L  LP  I  LESL  L+LA 
Sbjct: 651 STTNLTSIELWGCESLLEIPSSVQKCKKLYSLNLDNCKELRSLPSLI-QLESLSILSLAC 709

Query: 590 --------------------EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS- 628
                               +   E+ PSS+  L  L+   +  CK L+SLP L    S 
Sbjct: 710 CPNLKMLPDIPRGVKDLSLHDSGLEEWPSSVPSLDNLTFFSVAFCKNLRSLPSLLQWKSL 769

Query: 629 --IHARHCTSLKTLSNSSTL------LTRSSKHWDIFNFSNCSN 664
             I    C++LK L     L      L  S K +  F+F NC N
Sbjct: 770 RDIDLSGCSNLKVLPEIPDLPWQVGILQGSRKDYCRFHFLNCVN 813


>gi|225448053|ref|XP_002273151.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1468

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/539 (43%), Positives = 317/539 (58%), Gaps = 61/539 (11%)

Query: 13  HP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           HP K++VFLSFRG+D R +F  HL++ALC+  I TFIDD+  RG +IS +L  AIE S+ 
Sbjct: 17  HPWKYEVFLSFRGEDTRKSFTDHLHSALCQYGINTFIDDQFRRGEQISSALLRAIEESRF 76

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPS----- 121
           SI++FSE YASS WCL+EL KILE     G    PVFY VDPS        Y  +     
Sbjct: 77  SIIVFSEHYASSSWCLDELTKILECVKVGGHTAFPVFYNVDPSHVRKQTGSYGVAFTKHE 136

Query: 122 ----------LGWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                     L W     + +           ES +I+  ++ I  +L+D   S N D L
Sbjct: 137 QVYRDNMEKVLKWREALTVASGLSGWDSRDRHESKVIKEIISKIWNELNDA-SSCNMDAL 195

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S I+ + S L  GS +   VGIWG+ GIGK+TIA  +Y  I + FEG  F+ N+R+
Sbjct: 196 VGMDSHIQNMVSLLCIGSDDVQMVGIWGMAGIGKSTIAKVVYQKIRTQFEGYCFLSNVRE 255

Query: 222 ESEK----------------VGGL----ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           +S K                 G L     N  +N  +  L  MKVL+V  D+   +Q+++
Sbjct: 256 KSLKNDPADMQMELLSQIFWEGNLNTRIFNRGINAIKNTLHSMKVLVVLDDVDCPQQLEV 315

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  + F  GS++IITTR+  LL          ++EVKEL+ +++  LF ++AF    P
Sbjct: 316 LAGNHNWFGLGSQIIITTREKNLLDEKT-----EIYEVKELNNSEAHMLFCQHAFKYKPP 370

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              F++L +  + Y  G+PLAL++LG  L   S++EWES + KLKR+P+  IQ VL++S+
Sbjct: 371 TEDFVQLCDCALNYTKGIPLALKILGCSLYNRSKKEWESELEKLKRIPNKAIQDVLRISF 430

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGLD+ +++IFLD ACFFKG D+        +C F  +IGI  L+ KSLVTIS NK+ MH
Sbjct: 431 DGLDNNQKDIFLDIACFFKGQDKDYTTKIQKSCDFFPEIGIRNLIDKSLVTISYNKLCMH 490

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD--SLKELYL 496
           DL+QEMG EIVRQESIKDPGKRSRLW  ED+  +L  N  T    GI LD  +LKEL+ 
Sbjct: 491 DLIQEMGWEIVRQESIKDPGKRSRLWVTEDVIHMLTTNIGTEAVEGIVLDLSALKELHF 549



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 109/169 (64%), Gaps = 10/169 (5%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPE+     N+ +L LK TAI+ LP SI  L+ L  
Sbjct: 713 SFSSSIHMESLQILNLAGCSKLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLAL 772

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C  L+S+ S +  LKSL+ L LS CL+L+KLPE   N+ESL+ L L +    ++P
Sbjct: 773 LNLGECKSLESLPSCIFKLKSLKTLILSNCLRLKKLPEIRENMESLKELFLDDTGLRELP 832

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTL 646
           SS++ L++L  L+++NCK+L SLPE     SI      SLKTL+ S+ L
Sbjct: 833 SSIEHLNELVLLQMKNCKKLASLPE-----SIFK--LKSLKTLTISNCL 874



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 102/165 (61%), Gaps = 11/165 (6%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SLK L L  C  LK+ PEI  N+E L    L +T + ELPSSI +L+ LV
Sbjct: 783 SLPSCIFKLKSLKTLILSNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNELV 842

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L + NC  L S+   +  LKSL+ L +S CL+L+KLPE   N+ESL+ L L +    ++
Sbjct: 843 LLQMKNCKKLASLPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLREL 902

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           PSS++ L+ L  L+L+NCK+L SLPE  C         TSL+TL+
Sbjct: 903 PSSIEHLNGLVLLKLKNCKKLASLPESIC-------KLTSLQTLT 940



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 111/208 (53%), Gaps = 28/208 (13%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
             SLP  I  L SL+ L L GCS LK+ P+    + C ++ L+   + I+E+P+SI  L+ 
Sbjct: 924  ASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVK-LESNGSGIQEVPTSITLLTN 982

Query: 535  LVDLDLTNCSGLKSVS-----------------SRLCNLKSLRRLNLSGCLKLE-KLPEE 576
            L  L LT C G +S S                 S L  L SL+ LNLS C  LE  LP +
Sbjct: 983  LQVLSLTGCKGGESKSRNLALSLRSSPTEGFRLSSLTALYSLKELNLSDCNLLEGALPSD 1042

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
            + +L  LE L+L+   F  +PS + +L +L  L L++CK LQSLPELP     + A  CT
Sbjct: 1043 LSSLSWLERLDLSINSFITVPS-LSRLPQLERLILEHCKSLQSLPELPSSIIELLANDCT 1101

Query: 636  SLKTLSN-SSTLLTRSSKHWDIFNFSNC 662
            SL+ +S  SS  + R    ++ F F NC
Sbjct: 1102 SLENISYLSSGFVLRKFCDFN-FEFCNC 1128



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 83/140 (59%), Gaps = 4/140 (2%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            SLP  I  L SLK L +  C  LK+ PEI  N+E L    L +T + ELPSSI +L+ L
Sbjct: 853 ASLPESIFKLKSLKTLTISNCLRLKKLPEIRENMESLKELFLDDTGLRELPSSIEHLNGL 912

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
           V L L NC  L S+   +C L SL+ L LSGC +L+KLP+++G+L+ L  L       ++
Sbjct: 913 VLLKLKNCKKLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLVKLESNGSGIQE 972

Query: 596 IPSSMKQLSKLSDLRLQNCK 615
           +P+S+  L+ L  L L  CK
Sbjct: 973 VPTSITLLTNLQVLSLTGCK 992



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 34/152 (22%)

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
             G  NL+R   + C         T++ ++  SIG L +L+ LDL  C  LKS SS + +
Sbjct: 670 FSGAPNLRRIILVGC---------TSLVKVHPSIGALKKLIFLDLEGCKNLKSFSSSI-H 719

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE------------------------K 591
           ++SL+ LNL+GC KL+K PE  G + +L  L+L                          K
Sbjct: 720 MESLQILNLAGCSKLKKFPEVQGAMYNLPELSLKGTAIKGLPLSIEYLNGLALLNLGECK 779

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             E +PS + +L  L  L L NC RL+ LPE+
Sbjct: 780 SLESLPSCIFKLKSLKTLILSNCLRLKKLPEI 811


>gi|224133498|ref|XP_002328057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222837466|gb|EEE75845.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1187

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 272/686 (39%), Positives = 379/686 (55%), Gaps = 89/686 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KH VFLSFRG+D R  F SHL+AAL R+ I TFID+ L RG EISPSL  AIE S +S++
Sbjct: 21  KHHVFLSFRGEDTRVGFTSHLHAALERKNILTFIDNDLRRGEEISPSLVKAIEDSMLSVI 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           IFS+ YASS+WCL+EL+KILES+   GQI +PVFY VDPSD                   
Sbjct: 81  IFSQNYASSKWCLDELLKILESRKVRGQIAIPVFYEVDPSDIRKQSGSFGDVFAQLVKRK 140

Query: 116 -----AGYCPSLGWMGIFDIP-------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                   C         +I         SES  IE  V DI  KL  +FP  +   LVG
Sbjct: 141 ALKMEEEQCFRAALNEAANISGHDSRKIESESKFIEVIVEDILNKLCKIFPV-HPTNLVG 199

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++  +++IES L   + +   VGIWG+GGIGKTTIA A+Y+ I + FEG  FM N+R+E 
Sbjct: 200 IDEHVRKIESLLDMETQDVRIVGIWGMGGIGKTTIARAVYNKICTKFEGFSFMANVREEL 259

Query: 224 EK--VGGLANIHLN------------FERRRLSRMKVLIVFYDL-TDLKQIDLLIGRLDG 268
           ++  V  L     +            F + RL R KVLIVF D+ + +   +LL+ + D 
Sbjct: 260 KRRTVFDLQRRFFSRILDQKIWETSPFIKDRLRRKKVLIVFDDVDSSMVLQELLLEQRDA 319

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F PGSR+++T+RD Q+L       V   +EVK L++ D+L LF   AF +  P    + L
Sbjct: 320 FGPGSRILVTSRDQQVL----NQEVDATYEVKALNHMDALQLFKTKAFKKTCPTIDHIHL 375

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
              ++ Y  G PLAL VLGS L   S+E+W SA N L ++ +++I  VL+VS+DGL+ E+
Sbjct: 376 LGRMVTYTKGNPLALVVLGSALCDKSKEDWYSASNGLGQIQNVEILNVLRVSFDGLNTEQ 435

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           ++IFL  ACFFKG ++      L+    +    IS L+ KSLV  S+N + MHDLLQEM 
Sbjct: 436 RSIFLHIACFFKGINRLHFTRILENKCPAVHYYISVLIDKSLVLASDNILGMHDLLQEMA 495

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD-------SLKELYLGGC 499
             IV +ES +DPG+RSRL+ PEDIY+VL EN  T    GI LD       SLK     G 
Sbjct: 496 YSIVHEES-EDPGERSRLFDPEDIYKVLKENKGTKRVKGICLDMSKSRKMSLKTDSFAGM 554

Query: 500 SNLK-------RFPEISCNIEDLDLKETAIEELPSSIG----------------NLSRLV 536
           + L+        + E+  N   + L  + +E L + +                 +   LV
Sbjct: 555 NCLEFLIFYNPSYFEVEKN--RVHLPHSGLEYLSNELRYFHWDGFPSKSLPQDFSAENLV 612

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
             D +  S ++ + S   NL +L+ +NLS    L +LP ++    +LEY+NL+  +  ++
Sbjct: 613 QFDFSE-SKVEKLWSGKQNLLNLKAINLSSSRCLTELP-DLSKAINLEYINLSGCESLKR 670

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +PSS + L KL  L L +C  L +LP
Sbjct: 671 VPSSFQHLEKLKCLDLTDCHNLITLP 696



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 8/173 (4%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L+++ L GC N+ +FP IS NI  L L  TAIEE+PSSI  L++LV L + +C  L  + 
Sbjct: 744 LRQISLIGCKNITKFPVISENIRVLLLDRTAIEEVPSSIEFLTKLVSLHMFDCKRLSKLP 803

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
           S +C LK L    LSGC KLE  PE    ++SL+ L L     +K+PSS++    L  L 
Sbjct: 804 SSICKLKFLENFYLSGCSKLETFPEIKRPMKSLKTLYLGRTAIKKLPSSIRHQKSLIFLE 863

Query: 611 LQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           L     ++ L ELP    I  AR C SL+T+S+ +  L++S +     N +NC
Sbjct: 864 LDGAS-MKELLELPPSLCILSARDCESLETISSGT--LSQSIR----LNLANC 909



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 65/208 (31%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           + L E   L   INL+ +    L GC +LKR                    +PSS  +L 
Sbjct: 643 RCLTELPDLSKAINLEYIN---LSGCESLKR--------------------VPSSFQHLE 679

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE---EIGNL---------- 580
           +L  LDLT+C  L ++  R+ + K L +L ++GC  +   PE   +IG L          
Sbjct: 680 KLKCLDLTDCHNLITLPRRI-DSKCLEQLFITGCSNVRNCPETYADIGYLDLSGTSVEKV 738

Query: 581 ------------------------ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
                                   E++  L L     E++PSS++ L+KL  L + +CKR
Sbjct: 739 PLSIKLRQISLIGCKNITKFPVISENIRVLLLDRTAIEEVPSSIEFLTKLVSLHMFDCKR 798

Query: 617 LQSLPELPCG----SSIHARHCTSLKTL 640
           L  LP   C      + +   C+ L+T 
Sbjct: 799 LSKLPSSICKLKFLENFYLSGCSKLETF 826


>gi|357468519|ref|XP_003604544.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505599|gb|AES86741.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1087

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 282/795 (35%), Positives = 393/795 (49%), Gaps = 175/795 (22%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF+SFRGKD+R +F+SHL  AL R+KI+ F+DD+L RG+EI  SL   IEGS IS++
Sbjct: 61  KYDVFVSFRGKDIRGDFLSHLIEALRRKKIKAFVDDELKRGDEILQSLVRGIEGSLISLI 120

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF----DI 130
           IFS+ YASSRWCL ELV IL+ + KYGQIVVP+FY +DP+D  Y     +   F     +
Sbjct: 121 IFSQDYASSRWCLEELVTILQCREKYGQIVVPIFYGIDPADVRY-QMKSYENAFVEHQRV 179

Query: 131 PTSESVLIEGNVNDISKKLSDLFPSDNKDQ-------------------------LVGVE 165
            +S  V I  +  + S  LS +  SD ++                          L+G+ 
Sbjct: 180 YSSTKVQIWRHALNKSANLSGIKSSDFRNDVQLLKEIIKCVSMNLNNKHLISSKGLIGIG 239

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
             I  + S L   S +   VGIWG+GGIGKTT+A  ++  + + +EG  F++NIR+ES K
Sbjct: 240 KQIAHLISLLSLDSQDVRIVGIWGMGGIGKTTLAEEVFHQLQTEYEGCCFLENIREESAK 299

Query: 226 VGGL-------------------ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
            G L                   AN   ++ + R+SRMK LIV  D+ D  Q+++L G  
Sbjct: 300 HGMLFLKEKLFSALLDEDVKVDTANRLPHYVKTRISRMKALIVLDDVNDFDQMEILAGDH 359

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
           D F  GSRVIITTRD Q+L       V  ++EV  L ++ SL LF+ NAF        + 
Sbjct: 360 DLFGFGSRVIITTRDKQML----SQDVDDIYEVGALDFDKSLELFNLNAFKVKELEIEYY 415

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
           EL+  V+ YA G+PL L+VL   L+G  +  WES ++KLK+MP   +Q V ++SYD LD 
Sbjct: 416 ELTKRVVNYAKGIPLVLKVLAHLLRGKDKLVWESQLDKLKKMPSKKVQDVTRLSYDDLDR 475

Query: 387 EEQNIFLDTACFFKGND---QYLVMNFLDA-CRFSAKIGISRLVGKSLVTIS-NNKITMH 441
           +E+ IF D ACFF G++    Y+     D+    S   G+ RL  K L++ S +N I+MH
Sbjct: 476 KEKKIFSDLACFFNGSNLKVDYIKFLLKDSESDNSVASGLERLKDKGLISFSKDNVISMH 535

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT----------SLP-------- 483
           D++QEMG EIVRQES  DPG  SRLW  +D+Y+VL  +T           LP        
Sbjct: 536 DIIQEMGREIVRQESNGDPGSCSRLW-DDDVYEVLKNDTGTEAIRSIWMQLPTLRKLKLS 594

Query: 484 --TGINLDSLKELYLGGCSN---------------------------LKRFP-EISC-NI 512
             T  N+ +L+ LY+    +                           LK  P E S   +
Sbjct: 595 PSTFANMRNLQFLYVPSTCDQDGFDLLPQGLHSLPPELRYLSWMHYPLKSLPDEFSAEKL 654

Query: 513 EDLDLKETAIEELPSSIGNLSRLVD-----------------------LDLTNCSGLKSV 549
             LDL  + +E+L   + NL  L +                       LD+  CS L SV
Sbjct: 655 VILDLSYSRVEKLWHGVQNLLNLKEVKLFFSRYLKELPDFSKALNLEVLDIHFCSQLTSV 714

Query: 550 SSRLCNLKSLRRLNLSGCLKLEK------------------------------------- 572
              + +L+ L +L+LS C  L +                                     
Sbjct: 715 HPSILSLEKLEKLDLSHCTSLTELTSDTHTSSLRYLNLKFCKNIRKFSVTSVNMTELDLR 774

Query: 573 ------LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
                 LP   G    LE L+L     E  PS  K L KL  L ++ C++LQ+LP LP  
Sbjct: 775 YTQVNTLPASFGCQSKLEILHLGNCSIENFPSCFKNLIKLQYLEVRYCQKLQNLPVLPPS 834

Query: 627 SSI-HARHCTSLKTL 640
             I  A+ CT+LKT+
Sbjct: 835 LEILLAQECTALKTV 849


>gi|255578414|ref|XP_002530072.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530425|gb|EEF32312.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1135

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 272/704 (38%), Positives = 373/704 (52%), Gaps = 105/704 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVFLSFRGKD R NF SHL  ALC + I  FID ++ RG EIS ++  AI GS+ISI 
Sbjct: 11  KHDVFLSFRGKDTRFNFTSHLYHALCSKGINCFIDGRIERGVEISHAIIRAIRGSRISIA 70

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----------------AGY 118
           +FS+ YASS +CL+EL+ +L           P+FY VDP D                A +
Sbjct: 71  VFSQDYASSSYCLDELLAMLSCNASRDHFFFPIFYKVDPEDVEKQTGNFGKAFGEVEAEF 130

Query: 119 CPSL-----------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
             +L                 GW  + +    E+  I+  V ++S KL+        +  
Sbjct: 131 SGNLEKVSRWKAALAKAAKFAGWPLLDN--GDEAKFIQSIVENVSTKLNRTL-LHVAEHP 187

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ES  KE+ S L   S +   VGI G GGIGKTTIA AIY+ I++ FEGS F++N+R 
Sbjct: 188 VGLESHAKEVMSLLNPSSKDVWMVGICGTGGIGKTTIAKAIYNKIANQFEGSCFLENVRK 247

Query: 222 ESEK------------VGGLANIHL-NFER------RRLSRMKVLIVFYDLTDLKQIDLL 262
             E+            V G  NI + NF R       RL   +VLIV  D+  + Q+  L
Sbjct: 248 TPEECFVQLQESLLIEVLGDKNIFVGNFSRGINCIKDRLCSKRVLIVIDDVDHVDQLKKL 307

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
              ++GF  GSR+IITTRD +LL  H    V  + ++ EL  ND+L LFS NAF    PA
Sbjct: 308 AA-VNGFGAGSRIIITTRDERLLVEHG---VKSIHKINELCPNDALVLFSWNAFKNPQPA 363

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             ++ELS  ++ YA G+PLAL VLGS+L   +  EWES + KLKR P+  I ++LK+SYD
Sbjct: 364 EDYMELSQWIVNYAKGLPLALVVLGSFLYKRAVPEWESEIAKLKRNPNKHIYEMLKISYD 423

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
           GLD  E+ IFLD ACFFKG D+ +V+  LDAC F+  IG+  L+ KSL++I NNKI MH 
Sbjct: 424 GLDGNEKAIFLDIACFFKGMDKDVVLKILDACDFNPVIGVQVLIEKSLISIENNKIQMHA 483

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----------LPTG------- 485
           LLQ MG ++V ++S K P KRSRLW  ED+  VL  N            LP         
Sbjct: 484 LLQSMGRQVVCEQSPK-PNKRSRLWLHEDVLAVLTGNKGNDDTEGILLDLPKPEEIQLSA 542

Query: 486 ---INLDSLKELYL------GGCSNLKR--------------FPEISC--NIEDLDLKET 520
              I + SL+ L +      GG  +L                 P   C   +  L++  +
Sbjct: 543 DAFIKMKSLRILLIRNAHITGGPFDLPNGLRWLEWPACPLLSMPSGFCARKLVGLNMHRS 602

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
            I E      N + L  +DL +C  L         + +L RLNL GC KL ++ + +GNL
Sbjct: 603 YIREFGEEFKNYNLLKFIDLRDCEFLTGTPD-FSAIPNLERLNLGGCSKLVEVHQSVGNL 661

Query: 581 ESLEYLNLAEK-DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             LE+L+     + + +PS+ K  S  + L L  C++L++ PE+
Sbjct: 662 AKLEFLSFEFCFNLKNLPSTFKLRSLRT-LLLTGCQKLEAFPEI 704



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 98/221 (44%), Gaps = 40/221 (18%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVD 537
           +LP+   L SL+ L L GC  L+ FPEI   I   E L L +TAI+ LPSSI NL+ L  
Sbjct: 677 NLPSTFKLRSLRTLLLTGCQKLEAFPEIVGEIKWLEKLSLTKTAIKGLPSSIANLTGLKV 736

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY------------ 585
           L LT C  L  +   +  L+ L+ L L GC  L + P       SL +            
Sbjct: 737 LTLTYCKNLTYLPHGIYKLEQLKCLFLEGCSMLHEFPANPNGHSSLGFPKFRCLDLRNCN 796

Query: 586 ------------------LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG- 626
                             L+L+  DF  +P      + L  L+L  C ++Q +PELP   
Sbjct: 797 LPDITFLKEHNCFPMLKDLDLSGNDFVSLPPYFHLFNNLRSLKLSKCMKVQEIPELPLYI 856

Query: 627 SSIHARHCTSLKTLSNSSTLLT-----RSSKHWDIFNFSNC 662
             + AR C SL+     + +       R ++  DI +FSNC
Sbjct: 857 KRVEARDCESLERFPQLARIFKCNEEDRPNRLHDI-DFSNC 896



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 77/138 (55%), Gaps = 4/138 (2%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNC 543
           N + LK + L  C  L   P+ S   N+E L+L   + + E+  S+GNL++L  L    C
Sbjct: 613 NYNLLKFIDLRDCEFLTGTPDFSAIPNLERLNLGGCSKLVEVHQSVGNLAKLEFLSFEFC 672

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             LK++ S    L+SLR L L+GC KLE  PE +G ++ LE L+L +   + +PSS+  L
Sbjct: 673 FNLKNLPSTF-KLRSLRTLLLTGCQKLEAFPEIVGEIKWLEKLSLTKTAIKGLPSSIANL 731

Query: 604 SKLSDLRLQNCKRLQSLP 621
           + L  L L  CK L  LP
Sbjct: 732 TGLKVLTLTYCKNLTYLP 749


>gi|359493496|ref|XP_003634615.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1180

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 279/728 (38%), Positives = 398/728 (54%), Gaps = 78/728 (10%)

Query: 1   MASSSSSINMI----PHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRG 55
           MASSS+ +++     PH  K+DVFLSFRG+D R +F +HL++AL ++ I TF D  L RG
Sbjct: 1   MASSSTILSVPSSSSPHRWKYDVFLSFRGEDTRQSFTAHLHSALSQKGINTFKDSLLPRG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS- 114
            +ISP+L  AIE S+ SI++ SE YASS WCL EL KILE   + G   +PVF+ VDPS 
Sbjct: 61  EKISPALLQAIEESRFSIIVLSENYASSSWCLEELTKILECVEEGGHTALPVFHNVDPSN 120

Query: 115 ----DAGYCPSLG---------------WMGIFDIPTS----------ESVLIEGNVNDI 145
               +  +  +                 W        +          ES +IE  V  I
Sbjct: 121 VRKQEGSFAKAFAKHEQVYKDKMEQVVKWRDALTEAATIAGWDTRNRDESEVIEQIVTRI 180

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
             +  D F S N D LVG++S ++++ S+L  GS +   VGIWG+ GIGKTTIA AIY  
Sbjct: 181 LNEPIDAF-SSNMDALVGMDSRMEDLLSRLCIGSDDVRFVGIWGMAGIGKTTIAEAIYDR 239

Query: 206 ISSHFEGSYFMQNIRDESEK--------------VGGLANIH--LNFERRRLSRMKVLIV 249
           I + F+G  F++N+R++S++              +GG+ N++  +NF + RL   +VLIV
Sbjct: 240 IYTKFDGCCFLKNVREDSQRHGLTYLQETLLSQVLGGINNLNRGINFIKARLRPKRVLIV 299

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+   +Q++ L G  D F  GSR+IITTR+ +LL       V  +++V++L Y+++L 
Sbjct: 300 LDDVVHRQQLEALAGNHDWFGSGSRIIITTREKRLLIEQE---VDEIYKVEKLEYDEALK 356

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LF + AF   HP   F++L +  + Y  G+PLAL+VLGS L   S  EW+S ++KL + P
Sbjct: 357 LFCQYAFRYKHPTEDFMQLCHHAVDYTGGLPLALKVLGSCLYRKSIHEWKSELDKLNQFP 416

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           + ++  VLK S+DGLDD E+N+FLD A F+KG D+  V+  LD     ++IG   LV KS
Sbjct: 417 NKEVLNVLKTSFDGLDDNEKNMFLDIAFFYKGEDKDFVIEVLDNFFPVSEIG--NLVDKS 474

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI- 486
           L+TIS+NK+ MHDLLQEMG EIVRQESIKDPGKRSRL   EDI+ VL  N+ T    G+ 
Sbjct: 475 LITISDNKLYMHDLLQEMGWEIVRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMV 534

Query: 487 -NLDSLKELYL-----GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +L + KEL L        + L+     +C       +  + EEL +S  +  R +  D 
Sbjct: 535 FDLSASKELNLSVDAFAKMNKLRLLRFYNCQFYG-SSEYLSEEELIASTRDAWRWMGYDN 593

Query: 541 TNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           +  +  K   SR     S  LR L+  G   L+ LP  I + + L  LN+     +++  
Sbjct: 594 SPYNDSKLHLSRDFKFPSNNLRSLHWHG-YPLKSLP-SIFHPKKLVELNMCYSLLKQLWE 651

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL---PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWD 655
             K   KL  ++L + + L   P+    P    I    CTSL  L  S   L    K   
Sbjct: 652 GKKAFEKLKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGAL----KELI 707

Query: 656 IFNFSNCS 663
             N   CS
Sbjct: 708 FLNLEGCS 715



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 96/153 (62%), Gaps = 8/153 (5%)

Query: 475 VLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEI-SCNIEDLD---LKETAIEELP 526
           +LN  TSL    P+   L  L  L L GCS L++FPE+   N+EDL    L+ TAI ELP
Sbjct: 686 ILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAIRELP 745

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
           SSIG L+RLV L+L NC  L S+   +C L SL+ L LSGC KL+KLP+++G L+ L  L
Sbjct: 746 SSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVEL 805

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           ++     +++PSS+  L+ L +L L  CK  +S
Sbjct: 806 HVDGTGIKEVPSSINLLTNLQELSLAGCKGWES 838



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 109/208 (52%), Gaps = 26/208 (12%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
            SLP  I  L SL+ L L GCS LK+ P+    + C +E L +  T I+E+PSSI  L+ 
Sbjct: 766 ASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVE-LHVDGTGIKEVPSSINLLTN 824

Query: 535 LVDLDLTNCSGLKSVS------------------SRLCNLKSLRRLNLSGCLKLE-KLPE 575
           L +L L  C G +S S                   RL  L SL+ LNLS C  LE  LP 
Sbjct: 825 LQELSLAGCKGWESKSWNLAFSFGSWPTLEPLRLPRLSGLYSLKILNLSDCNLLEGALPI 884

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
           ++ +L SLE L+L+   F  IP+++  LS+L  L L  CK LQSLPELP     ++A  C
Sbjct: 885 DLSSLSSLEMLDLSRNSFITIPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEAC 944

Query: 635 TSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           TSL+T S S +  T          FSNC
Sbjct: 945 TSLETFSCSPSACTSKRYGGLRLEFSNC 972



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 8/121 (6%)

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI-GNLESLEY 585
           S+   L R++   L  C+ L  +   +  LK L  LNL GC KLEK PE + GNLE L  
Sbjct: 677 SAAPKLRRII---LNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSG 733

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTLS 641
           ++L      ++PSS+  L++L  L L+NCK+L SLP+  C      ++    C+ LK L 
Sbjct: 734 ISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLP 793

Query: 642 N 642
           +
Sbjct: 794 D 794


>gi|356506534|ref|XP_003522035.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1035

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 264/723 (36%), Positives = 394/723 (54%), Gaps = 95/723 (13%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEG 68
           N IP  K+DVF+SFRG D+R  F+SHL+ A  +++I  F+DDKL RG+EIS SL  AIEG
Sbjct: 3   NDIPRIKYDVFVSFRGSDIRLGFLSHLSKAFHQKQIHAFVDDKLQRGDEISQSLLEAIEG 62

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGI- 127
           S IS++IFSE YASSRWCL ELVKI+E + +YGQIV+PVFY VDP++  +        + 
Sbjct: 63  SSISLIIFSEDYASSRWCLEELVKIVECREEYGQIVIPVFYNVDPTNVRHQKGSFETALA 122

Query: 128 -----FDIPT-----------------------SESVLIEGNVNDISKKLSDLFPSDNKD 159
                +D+P                        +++ L+E  ++ + K+L+   P +N  
Sbjct: 123 EHEKKYDLPIVRMWRRALKNSANLAGINSTNFRNDAELLEDIIDHVLKRLNKK-PINNSK 181

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            L+G++  I ++ES L   S +   +GIWG+ GIGKTTI   +++     +E   F+  +
Sbjct: 182 GLIGIDKPIADLESLLRQESKDVRVIGIWGMHGIGKTTIVEELFNKQCFEYESCCFLAKV 241

Query: 220 RDESEKVGGLA------------NIHLNFER-------RRLSRMKVLIVFYDLTDLKQID 260
            +E E+ G +             ++ +N          RR+ RMK+ IV  D+ D  Q++
Sbjct: 242 NEELERHGVICVKEKLISTLLTEDVKINTTNGLPNDILRRIGRMKIFIVLDDVNDYDQVE 301

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G LD    GSR+IIT RD Q+L N    +V  ++E+  LS +++  LF  NAF Q+H
Sbjct: 302 KLVGTLDWLGSGSRIIITARDRQILHN----KVDDIYEIGSLSIDEAGELFCLNAFNQSH 357

Query: 321 PAA---GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
                  +L LS  ++ YA GVPL L+VLG  L+G  +E W+S ++KL++MP+  +  ++
Sbjct: 358 LGKEYWDYLLLSYWMVDYAKGVPLVLKVLGQLLRGKDKEVWKSQLDKLQKMPNKKVHDIM 417

Query: 378 KVSYDGLDDEEQNIFLDTACFFKG-NDQYLVMNFL---DACRFSAKIGISRLVGKSLVTI 433
           K SY  LD +E+NIFLD ACFF G N +   +N L        S  IG+ RL  KSL+TI
Sbjct: 418 KPSYYDLDRKEKNIFLDIACFFNGLNLKVDYLNLLLRDHENDNSVAIGLERLKDKSLITI 477

Query: 434 S-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINL 488
           S +N ++MH+++QEMG EI  +ES +D G RSRL   ++IY+VLN N          I+L
Sbjct: 478 SEDNTVSMHNIVQEMGREIAHEESSEDLGSRSRLSDADEIYEVLNNNKGTSAIRSISIDL 537

Query: 489 DSLKELYLG-----GCSNLKRFPEI--SCNIEDLDLKETAIEELPSSIGNL--------- 532
             +++L LG       SNL+ F +     N +D+D     +E LPS+I  L         
Sbjct: 538 SKIRKLKLGPRIFSKMSNLQ-FLDFHGKYNRDDMDFLPEGLEYLPSNIRYLRWKQCPLRS 596

Query: 533 -------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
                    LV LDL++ S ++ +   + NL +L+ + L  C  +E+LP +     +LE 
Sbjct: 597 LPEKFSAKDLVILDLSD-SCVQKLWDGMQNLVNLKEVRLYRCQFMEELP-DFTKATNLEV 654

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLS 641
           LNL+      + SS+  L KL  L +  C  L  L      L     ++   C  LK LS
Sbjct: 655 LNLSHCGLSSVHSSIFSLKKLEKLEITYCFNLTRLTSDHIHLSSLRYLNLELCHGLKELS 714

Query: 642 NSS 644
            +S
Sbjct: 715 VTS 717



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 24/200 (12%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           NL +LKE+ L  C  ++  P+ +   N+E L+L    +  + SSI +L +L  L++T C 
Sbjct: 625 NLVNLKEVRLYRCQFMEELPDFTKATNLEVLNLSHCGLSSVHSSIFSLKKLEKLEITYCF 684

Query: 545 GLKSVSSRLCNLKSLRRLNLSGC---------------------LKLEKLPEEIGNLESL 583
            L  ++S   +L SLR LNL  C                       L+ LP   G    L
Sbjct: 685 NLTRLTSDHIHLSSLRYLNLELCHGLKELSVTSENMIELNMRGSFGLKVLPSSFGRQSKL 744

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
           E L +     + +PSS+K  ++L  L L++C  LQ++PELP    ++ A  C  L+T+  
Sbjct: 745 EILVIYFSTIQSLPSSIKDCTRLRCLDLRHCDFLQTIPELPPSLETLLANECRYLRTVLF 804

Query: 643 SSTLLTRSSKHWDIFNFSNC 662
            ST + +  ++     F NC
Sbjct: 805 PSTAVEQLKENRKKIEFWNC 824


>gi|147770134|emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/519 (43%), Positives = 312/519 (60%), Gaps = 48/519 (9%)

Query: 13  HP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           HP K++VFLSFRG+D R +F  HL+ AL R  I TFIDD+L RG +IS +L  AIE S+ 
Sbjct: 17  HPRKYEVFLSFRGEDTRKSFTDHLHEALHRCGINTFIDDQLRRGEQISSALLQAIEESRF 76

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPS----- 121
           SI+IFSE YASS WCL+EL KILE     G    PVFY VDPS        Y  +     
Sbjct: 77  SIIIFSEHYASSSWCLDELTKILECVKVGGHTXFPVFYNVDPSHVRKQTGSYGVAFTKHE 136

Query: 122 ----------LGWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                     L W     + +           ES +I+  V+ I  +L+D   S N + L
Sbjct: 137 KVYRDNMEKVLKWREALTVASGLSGWDSRDRHESKVIKEIVSKIWNELNDA-SSCNMEAL 195

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S I+ + S L  GS +   VGIWG+ GIGKTTIA A+Y  I + FE  ++  N+  
Sbjct: 196 VGMDSHIZNMVSLLCIGSDDVRMVGIWGMAGIGKTTIAEAVYQKICTQFE-VFWEGNLNT 254

Query: 222 ESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRD 281
                  + N  +N  ++ L  M+VLIV  D+   +Q+++L G  + F PGSR+IITTR+
Sbjct: 255 R------IFNRGINAIKKXLHSMRVLIVLDDVDRPQQLEVLAGNHNWFGPGSRIIITTRE 308

Query: 282 VQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPL 341
             LL          ++E KEL+ +++  L  ++AF    PA  F++L +  + Y  G+PL
Sbjct: 309 KHLLDEKV-----EIYEXKELNKDEARXLXYQHAFKYKPPAGXFVQLCDRALNYTKGIPL 363

Query: 342 ALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKG 401
           AL++LG +L   S++EWES + KL+R+P+ +IQ VL++S+DGLDD +++IF D ACFFKG
Sbjct: 364 ALKILGRFLYNRSKKEWESELEKLRRIPNKEIQDVLRISFDGLDDNQKDIFXDIACFFKG 423

Query: 402 NDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPG 461
            D+  V+  L +C F  +IGI  L+ KSLVTIS NK+ MHDL+QEMG EIVRQES KDPG
Sbjct: 424 QDKDYVIKLLKSCDFFPEIGIRNLIDKSLVTISYNKLCMHDLIQEMGWEIVRQESXKDPG 483

Query: 462 KRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYL 496
           K SRLW  +D+  +L  NT         +NL +LKEL+ 
Sbjct: 484 KXSRLWVNDDVIDMLTTNTGTEAVEGMVLNLSTLKELHF 522



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 10/164 (6%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+L+SL+ L L GCS LK+ PE+     N+ +L LK TAI+ LP SI  L+ L  
Sbjct: 683 SFLSSIHLESLQILTLSGCSKLKKXPEVQGAMDNLSELSLKGTAIKGLPLSIEYLNGLAL 742

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            +L  C  L+S+      LKSL+ L LS CL+L+KLPE   N+ESL+ L L +    ++P
Sbjct: 743 FNLEECKSLESLPGCXFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELP 802

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           SS++ L+ L  L+L+NCKRL SLPE  C         TSL+TL+
Sbjct: 803 SSIEHLNGLVLLKLKNCKRLASLPESIC-------KLTSLQTLT 839



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/139 (43%), Positives = 83/139 (59%), Gaps = 4/139 (2%)

Query: 481 SLP-TGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP     L SLK L L  C  LK+ PEI  N+E L    L +T + ELPSSI +L+ LV
Sbjct: 753 SLPGCXFKLKSLKTLILSNCLRLKKLPEIQENMESLKELFLDDTGLRELPSSIEHLNGLV 812

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L L NC  L S+   +C L SL+ L LSGC +L+KLP+++G+L+ L  L       +++
Sbjct: 813 LLKLKNCKRLASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLKLKANGSGIQEV 872

Query: 597 PSSMKQLSKLSDLRLQNCK 615
           PSS+  L++L  L L  CK
Sbjct: 873 PSSITLLTRLQVLSLAGCK 891



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 111/210 (52%), Gaps = 31/210 (14%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
             SLP  I  L SL+ L L GCS LK+ P+    + C ++ L    + I+E+PSSI  L+R
Sbjct: 823  ASLPESICKLTSLQTLTLSGCSELKKLPDDMGSLQCLLK-LKANGSGIQEVPSSITLLTR 881

Query: 535  LVDLDLTNCSGLKSVS-----------------SRLCNLKSLRRLNLSGCLKLE-KLPEE 576
            L  L L  C G  S S                 S L  L SL++LNLS    LE  LP +
Sbjct: 882  LQVLSLAGCKGGGSKSRNLALSLRASPTDGLRLSSLTVLHSLKKLNLSDRNLLEGALPSD 941

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARH 633
            + +L  LE L+L+  +F  +P+S+ +L  L  L +++CK LQSLPELP  SSI    A  
Sbjct: 942  LSSLSWLECLDLSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPELP--SSIKELLAND 999

Query: 634  CTSLKTLSNSSTLLTRSSKHWDI-FNFSNC 662
            CTSL+T S  S+      K  D  F FSNC
Sbjct: 1000 CTSLETFSYPSSAYPL-RKFGDFNFEFSNC 1028


>gi|255555353|ref|XP_002518713.1| Disease resistance protein RPS2, putative [Ricinus communis]
 gi|223542094|gb|EEF43638.1| Disease resistance protein RPS2, putative [Ricinus communis]
          Length = 1010

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 270/680 (39%), Positives = 379/680 (55%), Gaps = 99/680 (14%)

Query: 22  FRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYA 81
           FRG+D R+NF SHL+AAL  ++I TFIDD L RG EISPSL  AIE SKIS+VI S+ Y 
Sbjct: 6   FRGEDTRYNFTSHLHAALNGKRIPTFIDDDLERGKEISPSLLKAIEESKISVVIISQDYP 65

Query: 82  SSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFD---IPTSESVLI 138
           SS+WCL ELVKILE     GQ+V+PVFY VDPS           G F+       ES+L+
Sbjct: 66  SSKWCLEELVKILECMKNRGQMVIPVFYRVDPSHVR-----NQTGSFEDVFAQHKESLLV 120

Query: 139 --------EGNVNDI----------------SKKLSDLFPSDNKDQLVGVESIIKEIESQ 174
                      + ++                SKKL+ L  +     LVG+ES I+EIE  
Sbjct: 121 SKEKVQSWRAALKEVANLSGWHSTSTSHQGKSKKLNQLSSNYYSRGLVGIESRIQEIEFL 180

Query: 175 LLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG------- 227
               S     VGIWG+GG+ KTT+A AIY  I+  FE   F+ N R++ ++         
Sbjct: 181 FRKISLSVRKVGIWGMGGLDKTTLARAIYDRIAPQFESCCFLSNTREQLQRCTLAQLQNQ 240

Query: 228 ---------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQID--LLIGRLDGFVPGSRVI 276
                       N+  +F + RL   KVLI+  D  +  Q+   LL    D F  GSR+I
Sbjct: 241 LFSTLLEEQSTLNLRPSFIKDRLCCKKVLIIIDDADNTTQLQELLLDTEPDYFGSGSRII 300

Query: 277 ITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL-SNIVIKY 335
           IT+RD Q+LK+   + V  ++E++EL+ +++L LF+  AF Q++P      L +  V+KY
Sbjct: 301 ITSRDKQVLKS---TCVDEIYEMEELNEHEALQLFNFKAFKQDNPTGHHRRLQAERVVKY 357

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
           A G PLAL VLGS L G S+++WESA+ +LKR+PH DI +VL+ SYDGLD E+++IFLD 
Sbjct: 358 AKGNPLALTVLGSTLFGKSKKDWESALERLKRIPHKDIDEVLRTSYDGLDSEQRSIFLDI 417

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN--KITMHDLLQEMGGEIVR 453
           ACFF+G +Q  +   LD    SA I IS L+ +SL+ +S++  K+ +HDLLQEMG +IV 
Sbjct: 418 ACFFRGQNQNFITKILDGYYVSAHIVISTLIDRSLIMLSSDGSKLELHDLLQEMGRKIVF 477

Query: 454 QESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLK------------------- 492
           +ES K+PG RSRLW PED+  VLNEN  T    GI+LD  K                   
Sbjct: 478 EES-KNPGNRSRLWIPEDVCYVLNENKGTEAIEGISLDKSKATSKIRLRPDTFSRMYHLR 536

Query: 493 ---------ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
                    ++ L G   L+ FP     +  LD  +  ++ LP +      LV L+L + 
Sbjct: 537 FLKFYTEKVKISLDG---LQSFPN---ELRHLDWNDFPMKSLPPNFSP-QNLVVLNLRD- 588

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFEKIPSSMK 601
           S +K + +   NL  L+ ++LS    L  +P+  +  N+E + YL       E++ SS++
Sbjct: 589 SKVKKLWTGTQNLVKLKEIDLSHSKYLIGIPDLSKAINIEKI-YLT-GCSSLEEVHSSLQ 646

Query: 602 QLSKLSDLRLQNCKRLQSLP 621
            L+KL  L L +C +L+SLP
Sbjct: 647 YLNKLEFLDLGDCNKLRSLP 666



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 15/192 (7%)

Query: 477 NENTSLPTGINLDSLKELYLGGCSNLKRFPEISCN-IEDLDLKETAIEELPSSIGNLS-- 533
           N+  SLP  I+ + LK L LG    +KR  E   N +E L+L   AI+ + S I ++   
Sbjct: 660 NKLRSLPRRIDSNVLKVLKLGS-PRVKRCREFKGNQLETLNLYCPAIKNVASIISSILNS 718

Query: 534 -RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-K 591
            RLV L + NC  L  + S    +KSLR L+L+ C  ++++P  I +L  L  LNL + K
Sbjct: 719 SRLVHLSVYNCRKLSILPSSFYKMKSLRSLDLAYC-AIKQIPSSIEHLSQLIALNLTDCK 777

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
             E +PSS+  L +L+ + L +C+ L+SLPELP     + A +C SL++ S +      S
Sbjct: 778 YLESLPSSIGGLPRLATMYLNSCESLRSLPELPLSLRMLFANNCKSLESESIT------S 831

Query: 651 SKHWDIFNFSNC 662
           ++H  +  F+NC
Sbjct: 832 NRHL-LVTFANC 842



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 12/162 (7%)

Query: 488 LDSLKELYLGGCSNLKRFPE-ISCNI-EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           L+ L+ L LG C+ L+  P  I  N+ + L L    ++      GN  +L  L+L  C  
Sbjct: 648 LNKLEFLDLGDCNKLRSLPRRIDSNVLKVLKLGSPRVKRCREFKGN--QLETLNLY-CPA 704

Query: 546 LKSVSSRLCNLKSLRRL---NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           +K+V+S + ++ +  RL   ++  C KL  LP     ++SL  L+LA    ++IPSS++ 
Sbjct: 705 IKNVASIISSILNSSRLVHLSVYNCRKLSILPSSFYKMKSLRSLDLAYCAIKQIPSSIEH 764

Query: 603 LSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTL 640
           LS+L  L L +CK L+SLP     LP  ++++   C SL++L
Sbjct: 765 LSQLIALNLTDCKYLESLPSSIGGLPRLATMYLNSCESLRSL 806



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 5/108 (4%)

Query: 511 NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           ++  LDL   AI+++PSSI +LS+L+ L+LT+C  L+S+ S +  L  L  + L+ C  L
Sbjct: 744 SLRSLDLAYCAIKQIPSSIEHLSQLIALNLTDCKYLESLPSSIGGLPRLATMYLNSCESL 803

Query: 571 EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
             LPE   +L  L   N    + E I S+   L     +   NC RL+
Sbjct: 804 RSLPELPLSLRMLFANNCKSLESESITSNRHLL-----VTFANCLRLR 846


>gi|147858652|emb|CAN82538.1| hypothetical protein VITISV_004290 [Vitis vinifera]
          Length = 1241

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 281/764 (36%), Positives = 394/764 (51%), Gaps = 137/764 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+ VFLSFRG+D R+NF  HL  AL ++ IETF+DDK L  G EISP+L +AI+ S+ SI
Sbjct: 78  KYAVFLSFRGEDTRNNFTGHLYKALDQKGIETFMDDKKLRTGEEISPTLVTAIQRSRCSI 137

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG--------- 123
           ++ SE YASS+WCL ELV ILE K      VVP+FY VDPS       S G         
Sbjct: 138 IVLSENYASSKWCLEELVMILECKRTKNLKVVPIFYNVDPSHVRNQTGSFGEALAKHKEN 197

Query: 124 ----------WM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                     W           G+  +    E+ LIE  + DISK L  + P  +   LV
Sbjct: 198 LKIKVEKVQKWREALTQVANLSGLHSVKNKPEAQLIEEIIADISKDLYSV-PLKDAPNLV 256

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI--- 219
            V+S I+E+ES L   S +   VGIWG+GGIGKTT+A AIY  IS  FEG  F+ N+   
Sbjct: 257 AVDSCIRELESLLCLPSMDVRMVGIWGMGGIGKTTLARAIYEQISGQFEGCCFLPNVEHL 316

Query: 220 ---------RDESEKVGGLANIHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
                    ++   KV    NI +     + R    KVLIV  ++     +  L+G LD 
Sbjct: 317 ASKGDDYLRKELLSKVLRDKNIDVTITSVKARFHSKKVLIVIDNVNHRSILKTLVGELDW 376

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F P SR+IITTRD  +L  H    V  ++EV++L  + ++ LF+ +AF  + P    +EL
Sbjct: 377 FGPQSRIIITTRDKHVLTMH---GVDVIYEVQKLQDDKAIELFNHHAFINHPPTEDVMEL 433

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           S  VI YA G+PLAL+VLGS L   S++EWE A+NKL+++P M+I+KVL+ S+D LDD++
Sbjct: 434 SQRVIAYAQGLPLALEVLGSSLCKKSKDEWECALNKLEKIPDMEIRKVLQTSFDELDDDQ 493

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           +NIFLD A FF   ++      L++  FSA  GI  L+ KSL+   ++++ MHDLL EMG
Sbjct: 494 KNIFLDIAIFFNEVEEDFTTEMLNSFGFSAISGIRTLIDKSLIXNLDDELHMHDLLIEMG 553

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKEL-----YLGGCSNLK 503
            EIVR+ S K+PGKR+RLW  +DI    +E   +    NL  LKE+       G  S L+
Sbjct: 554 KEIVRRTSPKEPGKRTRLWEQQDICHGTDEVEVI--DFNLSGLKEICFTTEAFGNMSKLR 611

Query: 504 -----------------RFPEISCNIED-----------LDLKETAIEELPSSI------ 529
                            R  +   +I D           L  +E  ++ LPS        
Sbjct: 612 LLAIHESSXSDDSECSSRLMQCQVHISDDFKFHYDELRXLXWEEYPLKSLPSDFKSQNLV 671

Query: 530 ------GNLSRLVD----------LDLTNCSGLKSVS--SRLCNLKSLR----------- 560
                  +L+RL +          +DL++   L      SR+ NLK L            
Sbjct: 672 FLSMTKSHLTRLWEGNRVFKNLKYIDLSDSKYLAETPDFSRVXNLKXLXFEELPSSIAYA 731

Query: 561 ----RLNLSGCLKLEKLPEEIGNLESLEYLNLA-----------EKDFEKIPSSMKQLSK 605
                L+L  C KL  LP  I  L  LE L+L+             + + +P  + +LS 
Sbjct: 732 TKLVVLDLQNCEKLLSLPSSICKLAHLETLSLSGCSRLGKPQVNSDNLDALPRILDRLSH 791

Query: 606 LSDLRLQNCKRLQSLPELPCGSSI--HARHCTSLKTLSNSSTLL 647
           L +L+LQ+C+ L++LP LP    +   + +CTSL+ +S  S  L
Sbjct: 792 LRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYISPQSVFL 835


>gi|147858727|emb|CAN82909.1| hypothetical protein VITISV_025072 [Vitis vinifera]
          Length = 1177

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 273/709 (38%), Positives = 388/709 (54%), Gaps = 73/709 (10%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+D FLSFRG+D R NF +HL+AALC++ I TF D+ L RG +IS  L  AIE S+ SI+
Sbjct: 21  KYDAFLSFRGEDTRKNFTTHLHAALCQKGINTFKDNLLLRGEKISAGLLQAIEESRFSII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------ 123
           IFSE YASS WCL+EL KILE   + G   +PVFY VDPS        +  +        
Sbjct: 81  IFSENYASSSWCLDELTKILECVEEGGHTALPVFYNVDPSHVRKQKGCFADAFAEHEQVY 140

Query: 124 ---------WM-GIFDIPT---------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W   + ++ T          ES +IE  V  I  +  D F S N D LVG+
Sbjct: 141 REKMEKVVKWRKALTEVATISGWDSRDRDESEVIEEIVTRILNEPIDAF-SSNVDALVGM 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S ++++ S L  GS +   VGIWG+ GIGKTTIA AIY  I + F+G  F++++R++S+
Sbjct: 200 DSRMEDLLSLLCIGSNDVRFVGIWGMAGIGKTTIAEAIYDRIYTKFDGCCFLKDVREDSQ 259

Query: 225 K--------------VGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
           +              +GG+ N++  +NF + RL   KVLIV  ++   ++++ L+G  D 
Sbjct: 260 RHGLTYLQETLLSRVLGGINNLNRGINFIKARLHSKKVLIVLDNVVHRQELEALVGSHDW 319

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F PGSR+IITTR+ +LL       +  ++EV++L Y+++L LF + AF   HP   F++L
Sbjct: 320 FGPGSRIIITTREKRLLIEQE---MDAIYEVEKLEYDEALKLFCQYAFRYKHPTEDFMQL 376

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
            +  + Y   +PLAL+VLGS L   S  EW+S ++K  + P+ ++  VLK S+DGLDD E
Sbjct: 377 CHHAVDYTGSLPLALKVLGSCLYRKSIHEWKSELDKFNQFPNKEVLNVLKTSFDGLDDNE 436

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           +N+FLD A F+KG D+  V+  LD     ++IG   LV KSL+TIS+NK+ MHDLLQEMG
Sbjct: 437 KNMFLDIAFFYKGEDKDFVIEVLDNFFPVSEIG--NLVDKSLITISDNKLYMHDLLQEMG 494

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI--NLDSLKELYL-----GGC 499
            EIVRQESIKDPGKRSRL   EDI+ VL  N+ T    G+  +L + KEL L        
Sbjct: 495 WEIVRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKELNLSVDAFAKM 554

Query: 500 SNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS- 558
           + L+     +C       +  + +EL +S  +  R +  D +  +  K   SR     S 
Sbjct: 555 NKLRLLRFYNCQFYG-SSEYLSEKELIASTHDARRWMGYDNSPYNDSKLHLSRDFKFPSN 613

Query: 559 -LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
            LR L+  G   L+ LP    + E L  LN+     +++    K   KL  ++L + + L
Sbjct: 614 NLRSLHWHG-YPLKSLPSNF-HPEKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHSQHL 671

Query: 618 QSLPEL---PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
              P+    P    I    CTSL  L  S   L    K     N   CS
Sbjct: 672 TKTPDFSAAPKLRRIILNGCTSLVKLHPSIGAL----KELIFLNLEGCS 716



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 93/149 (62%), Gaps = 8/149 (5%)

Query: 475 VLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEI-SCNIEDLD---LKETAIEELP 526
           +LN  TSL    P+   L  L  L L GCS L++FPE+   N+EDL    L+ TAI ELP
Sbjct: 687 ILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAIRELP 746

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
           SSIG+L+RLV L+L NC  L S+   +C L SL+ L LSGC KL+KLP+++G L+ L  L
Sbjct: 747 SSIGSLNRLVLLNLRNCEKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVEL 806

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           N+     +++ SS+  L+ L  L L  CK
Sbjct: 807 NVDGTGIKEVTSSINLLTNLEALSLAGCK 835



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 111/207 (53%), Gaps = 27/207 (13%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
            SLP  I  L SL+ L L GCS LK+ P+    + C +E L++  T I+E+ SSI  L+ 
Sbjct: 767 ASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVE-LNVDGTGIKEVTSSINLLTN 825

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKS----------------LRRLNLSGCLKLEKLPEEIG 578
           L  L L  C G  S S  L + +S                L+ LNLS C  LE       
Sbjct: 826 LEALSLAGCKGGGSKSRNLISFRSSPAAPLQLPFLSGLYSLKSLNLSDCNLLEGALPSDL 885

Query: 579 NLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTS 636
           +  S       +K+ F  +P+S+ +LS+L  L L++CK L+SLPELP     ++A  CTS
Sbjct: 886 SSLSSLENLYLDKNSFITLPASLSRLSRLRSLTLEHCKSLRSLPELPSSIEYLNAHSCTS 945

Query: 637 LKTLSNSSTLLTRSSKHWDI-FNFSNC 662
           L+TLS SS+  T +SK  D+ FNF+NC
Sbjct: 946 LETLSCSSS--TYTSKLGDLRFNFTNC 970


>gi|359493483|ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 275/685 (40%), Positives = 375/685 (54%), Gaps = 71/685 (10%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R +F  HL+ ALC++ I TF+DD+L RG ++SP+L +AIE S+ SI+
Sbjct: 15  KYDVFLSFRGEDTRKSFTDHLHTALCQKGINTFMDDQLRRGEQVSPALLNAIEESRFSII 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           IFS+ YASS WCL+ELVKIL+     G   +PVFY V+PS        +  +        
Sbjct: 75  IFSDNYASSSWCLDELVKILDCIKVMGHRALPVFYNVNPSHVKKQTGSFAEAFAKHEQEN 134

Query: 124 ---------WM-GIFDIPT---------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W   + ++ T          ES LIE  V DI  KL    PS  K  LVG+
Sbjct: 135 REKMEKVVKWREALTEVATISGWDSRDRHESKLIEEIVRDIWNKLVGTSPSYMKG-LVGM 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ES ++ ++S L  GS +   VGIWG+ GIGKTTIA  IY  I + FEG  F+ N+R+ES 
Sbjct: 194 ESRLEAMDSLLCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESY 253

Query: 225 KVG--------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           K G                    GL N  +NF +  L   KVLI+  D+   KQ++ L G
Sbjct: 254 KHGLPYLQMELLSQILKERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLAG 313

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             + F  GSR+IITTRD  LL       V  ++EVKEL  +++L LF   AF   H    
Sbjct: 314 DNNWFGSGSRIIITTRDRHLLTCQE---VDAIYEVKELDNDEALKLFCLYAFRHKHGTED 370

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F +L    + Y +G+PLAL+VLGS L      EW+S ++KLK+ P+ ++Q VLK S++GL
Sbjct: 371 FRQLCGHALDYTSGLPLALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNVLKTSFEGL 430

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD EQNIFLD A F+KG+D+  V + LD+C F   IGI  L  KSL+TIS NK+ MHDLL
Sbjct: 431 DDNEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLL 490

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKEL--YLGG 498
           QEMG EIVRQ+S + PG+RSRL   EDI  VL  NT      GI LD  + KEL   +  
Sbjct: 491 QEMGWEIVRQKS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSASKELNFSIDA 549

Query: 499 CSNLKRFPEIS-CNIE-DLDLKETAIEELPSSIGNLSRLVDLDLT-NCSGLKSVSSRLCN 555
            + +KR   +  CN++ D  L   + +EL +   ++    +   T N   L   S  L N
Sbjct: 550 FTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWIERNYLYTQNKLHLYEDSKFLSN 609

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
             +LR L   G   L+  P    + E L  LN+     ++     K   KL  ++L + +
Sbjct: 610 --NLRDLYWHG-YPLKSFPSNF-HPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQ 665

Query: 616 RLQSLPE---LPCGSSIHARHCTSL 637
            L  +P+   +P    +  + CTSL
Sbjct: 666 HLTKIPDFSGVPNLRRLILKGCTSL 690



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 112/207 (54%), Gaps = 27/207 (13%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRL 535
           SLP  I  L SLK L L GCS LK  P+    + C + +L+   + ++E+P SI  L+ L
Sbjct: 786 SLPRSIFKLKSLKTLILSGCSELKDLPDNLGSLQC-LTELNADGSGVQEVPPSITLLTNL 844

Query: 536 VDLDLTNCSGLKSVSSRL-----------------CNLKSLRRLNLSGC-LKLEKLPEEI 577
             L L  C G +S S  +                   L SLR L L  C L    LP ++
Sbjct: 845 QILSLAGCKGGESKSRNMIFSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDL 904

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTS 636
           G++ SLE L+L+   F  IP+S+  LS+L  L L+ CK LQSLPELP    S++A  CTS
Sbjct: 905 GSIPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTS 964

Query: 637 LKTLSNSSTLLTRSSKHWDI-FNFSNC 662
           L+T + SS+  T S K  D+ FNF+NC
Sbjct: 965 LETFTCSSSAYT-SKKFGDLRFNFTNC 990



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 86/138 (62%), Gaps = 3/138 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPE+  N+E   +L L+ TAI+ LP SI NL+ L  
Sbjct: 716 SFSSSIHMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLAL 775

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C  L+S+   +  LKSL+ L LSGC +L+ LP+ +G+L+ L  LN      +++P
Sbjct: 776 LNLKECKSLESLPRSIFKLKSLKTLILSGCSELKDLPDNLGSLQCLTELNADGSGVQEVP 835

Query: 598 SSMKQLSKLSDLRLQNCK 615
            S+  L+ L  L L  CK
Sbjct: 836 PSITLLTNLQILSLAGCK 853



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 4/137 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            + LK + L    +L + P+ S   N+  L LK  T++ E+  SIG L +L+ L+L  C 
Sbjct: 653 FEKLKSIKLSHSQHLTKIPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCK 712

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS SS + +++SL+ L LSGC KL+K PE  GN+E L  L+L     + +P S++ L+
Sbjct: 713 KLKSFSSSI-HMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLT 771

Query: 605 KLSDLRLQNCKRLQSLP 621
            L+ L L+ CK L+SLP
Sbjct: 772 GLALLNLKECKSLESLP 788


>gi|451798990|gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 237/527 (44%), Positives = 309/527 (58%), Gaps = 57/527 (10%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R +F  HL+ ALC++ I TF+DD+L RG ++SP+L +AIE S+ SI+
Sbjct: 15  KYDVFLSFRGEDTRKSFTDHLHTALCQKGINTFMDDQLRRGEQVSPALLNAIEESRFSII 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           IFS+ YASS WCL+ELVKIL+     G   +PVFY V+PS        +  +        
Sbjct: 75  IFSDNYASSSWCLDELVKILDCIKVMGHRALPVFYNVNPSHVKKQTGSFAEAFAKHEQEN 134

Query: 124 ---------WM-GIFDIPT---------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W   + ++ T          ES LIE  V DI  KL    PS  K  LVG+
Sbjct: 135 REKMEKVVKWREALTEVATISGWDSRDRHESKLIEEIVRDIWNKLVGTSPSYMKG-LVGM 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ES ++ ++S L  GS +   VGIWG+ GIGKTTIA  IY  I + FEG  F+ N+R+ES 
Sbjct: 194 ESRLEAMDSLLCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESY 253

Query: 225 KVG--------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           K G                    GL N  +NF +  L   KVLI+  D+   KQ++ L G
Sbjct: 254 KHGLPYLQMELLSQILKERNPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRKQLEDLAG 313

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             + F  GSR+IITTRD  LL       V  ++EVKEL  +++L LF   AF   H    
Sbjct: 314 DNNWFGSGSRIIITTRDRHLLTCQE---VDAIYEVKELDNDEALKLFCLYAFRHKHGTED 370

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F +L    + Y +G+PLAL+VLGS L      EW+S ++KLK+ P+ ++Q VLK S++GL
Sbjct: 371 FRQLCGHALDYTSGLPLALKVLGSSLYTKGIHEWKSELDKLKQFPNKEVQNVLKTSFEGL 430

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD EQNIFLD A F+KG+D+  V + LD+C F   IGI  L  KSL+TIS NK+ MHDLL
Sbjct: 431 DDNEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLL 490

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           QEMG EIVRQ+S + PG+RSRL   EDI  VL  NT      GI LD
Sbjct: 491 QEMGWEIVRQKS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLD 536



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 101/164 (61%), Gaps = 10/164 (6%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPE+  N+E   +L L+ TAI+ LP SI NL+ L  
Sbjct: 716 SFSSSIHMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLAL 775

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C  L+S+   +  LKSL+ L LS C +L+KLPE   N+ESL  L L      ++P
Sbjct: 776 LNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELP 835

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           SS+  L+ L  L L+NCK+L SLP+  C         TSL+TL+
Sbjct: 836 SSIGCLNGLVFLNLKNCKKLASLPQSFC-------ELTSLRTLT 872



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 111/208 (53%), Gaps = 27/208 (12%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
             SLP     L SL+ L L GCS LK  P+    + C + +L+   + ++E+P SI  L+ 
Sbjct: 856  ASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQC-LTELNADGSGVQEVPPSITLLTN 914

Query: 535  LVDLDLTNCSGLKSVSSRLC-----------------NLKSLRRLNLSGC-LKLEKLPEE 576
            L  L L  C G +S S  +                   L SLR L L  C L    LP +
Sbjct: 915  LQILSLAGCKGGESKSRNMIFSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSD 974

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
            +G++ SLE L+L+   F  IP+S+  LS+L  L L+ CK LQSLPELP    S++A  CT
Sbjct: 975  LGSIPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCT 1034

Query: 636  SLKTLSNSSTLLTRSSKHWDI-FNFSNC 662
            SL+T + SS+  T S K  D+ FNF+NC
Sbjct: 1035 SLETFTCSSSAYT-SKKFGDLRFNFTNC 1061



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 81/139 (58%), Gaps = 4/139 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP  I  L SLK L L  C+ LK+ PEI  N+E   +L L  + I ELPSSIG L+ LV
Sbjct: 786 SLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLV 845

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L NC  L S+    C L SLR L L GC +L+ LP+ +G+L+ L  LN      +++
Sbjct: 846 FLNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQCLTELNADGSGVQEV 905

Query: 597 PSSMKQLSKLSDLRLQNCK 615
           P S+  L+ L  L L  CK
Sbjct: 906 PPSITLLTNLQILSLAGCK 924


>gi|359493553|ref|XP_003634625.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1273

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 268/755 (35%), Positives = 393/755 (52%), Gaps = 120/755 (15%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLS 63
           ++++ N IP   +DVFLSF G+D R+NF  HL  AL +    TF DDKL RG EI   L 
Sbjct: 42  ATTTTNSIPQKNYDVFLSFGGEDTRYNFTDHLYQALLKRGNRTFRDDKLKRGEEIGSELF 101

Query: 64  SAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGY 118
             IE S+ S+++FSE YA SRWCLNELVKI+E + + GQIV+ +FY VDPS       G+
Sbjct: 102 KVIERSRFSVIVFSENYADSRWCLNELVKIMECRKEMGQIVLSIFYHVDPSHVRKQTGGF 161

Query: 119 CPSLG---------------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDL 152
             +                 W        +           ES  I+    DI  +L+  
Sbjct: 162 GEAFKNYKEDTKEKKEMVQRWRSALTEAANLSGEHVKDDGYESQYIKKITEDIFSRLNHG 221

Query: 153 FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
           F   +K+ LVG++S + E+ S+L   S +   VGI+G GGIGKTT+A  + + I   +EG
Sbjct: 222 FIYVDKN-LVGLDSHLNEMTSKLCIESNDVRMVGIYGCGGIGKTTLAKVVCNRIFHQYEG 280

Query: 213 SYFMQNIRDESEKVGGLANIHLNF------ERRRLSRM--------------KVLIVFYD 252
           + F+ ++R+      GL N+          E   +S +              +VLI+  D
Sbjct: 281 TIFLGSVREACADHRGLLNLQKQLLDILVGENHNVSSLDQGKLMIKNTFNCKRVLIILDD 340

Query: 253 LTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           + DL Q++ L+G  + F PGSR+IITTR+  LLK H    +   +++KEL   DS+ LFS
Sbjct: 341 IDDLSQLESLVGSKEWFGPGSRIIITTRNKHLLKLHH---LDDSYQMKELDVEDSIELFS 397

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
            +AF QNHP   +  LS  ++ YA G+PLAL++LGS L   +  EWES ++KLKR+P+M+
Sbjct: 398 WSAFRQNHPKQKYAYLSKCIVDYAKGLPLALKILGSLLYERTILEWESELHKLKRIPNME 457

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           I  VL++S+DGLD E++ IFLD ACFFKG D   V   LD        GI  L  +SL+T
Sbjct: 458 ILHVLRISFDGLDREQKEIFLDIACFFKGQDMDFVSRILDGYS-----GIRHLSDRSLIT 512

Query: 433 ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----PTGINL 488
           I NNKI MHDL+Q+MG EIVR++  +DP K SRLW PEDIY+       +       ++L
Sbjct: 513 ILNNKIHMHDLIQQMGWEIVREKYPRDPNKWSRLWEPEDIYRAFIRKQGMENVEAIFMDL 572

Query: 489 DSLKELYLGG---------------CSN----------------------------LKRF 505
             +KE+                   C++                             +R+
Sbjct: 573 SRMKEIQFNSQVWAEMMKLRLLQIICNDDEEFMKMESKVHFPEDFEFPSYELSYLLWERY 632

Query: 506 PEISC-------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
           P  S        N+ +++LK++ I +L      L +L  L+L   + L  +S+    + +
Sbjct: 633 PLKSLPSNFYGENLIEINLKKSNIRQLWQGNKCLGKLKVLNLQGSTQLDHISN-FSTMPN 691

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           L RLNL  C  L+K+   IG L  L +L+L+  K  + +PSS++ L  L +L L+NC  L
Sbjct: 692 LERLNLRLCGSLDKIDSSIGVLTKLTWLDLSNCKLLKSLPSSIQYLDSLEELYLRNCSSL 751

Query: 618 QSLPELPCGSSIHARHC----TSLKTLSNSSTLLT 648
           +   E+  G     R      T+++ LS+S   +T
Sbjct: 752 EKFLEMERGCMKGLRELWLDNTAIEELSSSIVHIT 786



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 10/180 (5%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
            SLP+ I  L+SL  L L  CSNL+ FPEI  ++++L   DL+ TAI+ELPSS+  + RL 
Sbjct: 872  SLPSNICRLESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAIKELPSSVQRIKRLR 931

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE---SLEYLNLAEKDF 593
             LDL+NC  L+++   + +L+ L  L   GC KL+K P  +GNL+   SLE L+L+  D 
Sbjct: 932  YLDLSNCKNLETLPHTIYDLEFLVDLTAHGCPKLKKFPRNMGNLKGLRSLENLDLSYCDG 991

Query: 594  EK--IPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
             +  I S + Q  KL +L + +CK LQ +PE P     I A  CT+L+TL + S+ L  S
Sbjct: 992  MEGAIFSDIGQFYKLRELNISHCKLLQEIPEFPSTLREIDAHDCTALETLFSPSSPLWSS 1051



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 100/169 (59%), Gaps = 9/169 (5%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEIS--C--NIEDLDLKETAIEELPSSIGNLSRL 535
           SLP+ I  LDSL+ELYL  CS+L++F E+   C   + +L L  TAIEEL SSI +++ L
Sbjct: 729 SLPSSIQYLDSLEELYLRNCSSLEKFLEMERGCMKGLRELWLDNTAIEELSSSIVHITSL 788

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
             L L  C  LKS+ S +C L+SL  L+L  C  LE  PE + +++ LE LNL     ++
Sbjct: 789 ELLSLRICKNLKSLPSNICGLESLTTLDLRDCSNLETFPEIMEDMQHLESLNLRGTGIKQ 848

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTL 640
           I +  + L++L    L  CK L+SLP   C     +++   HC++L+T 
Sbjct: 849 IAAPFEHLNQLLFFSLCFCKNLRSLPSNICRLESLTTLDLNHCSNLETF 897



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 99/168 (58%), Gaps = 8/168 (4%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L+SL  L L  CSNL+ FPEI     ++E L+L+ T I+++ +   +L++L+
Sbjct: 801 SLPSNICGLESLTTLDLRDCSNLETFPEIMEDMQHLESLNLRGTGIKQIAAPFEHLNQLL 860

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
              L  C  L+S+ S +C L+SL  L+L+ C  LE  PE + +++ L+ L+L     +++
Sbjct: 861 FFSLCFCKNLRSLPSNICRLESLTTLDLNHCSNLETFPEIMEDMQELKNLDLRGTAIKEL 920

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTL 640
           PSS++++ +L  L L NCK L++LP    +L     + A  C  LK  
Sbjct: 921 PSSVQRIKRLRYLDLSNCKNLETLPHTIYDLEFLVDLTAHGCPKLKKF 968



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 8/161 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L L G + L      S   N+E L+L+   +++++ SSIG L++L  LDL+NC 
Sbjct: 666 LGKLKVLNLQGSTQLDHISNFSTMPNLERLNLRLCGSLDKIDSSIGVLTKLTWLDLSNCK 725

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-EIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            LKS+ S +  L SL  L L  C  LEK  E E G ++ L  L L     E++ SS+  +
Sbjct: 726 LLKSLPSSIQYLDSLEELYLRNCSSLEKFLEMERGCMKGLRELWLDNTAIEELSSSIVHI 785

Query: 604 SKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTL 640
           + L  L L+ CK L+SLP   CG    +++  R C++L+T 
Sbjct: 786 TSLELLSLRICKNLKSLPSNICGLESLTTLDLRDCSNLETF 826


>gi|255563210|ref|XP_002522608.1| conserved hypothetical protein [Ricinus communis]
 gi|223538084|gb|EEF39695.1| conserved hypothetical protein [Ricinus communis]
          Length = 840

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/542 (42%), Positives = 322/542 (59%), Gaps = 60/542 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS+SS+    P  K+DVFLSFRG D R+ FVSHL  AL  ++I TF D+ L+RG +IS 
Sbjct: 1   MASTSSTP---PQRKYDVFLSFRGLDTRNGFVSHLFKALSEKQIITFKDENLDRGEQISD 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-- 118
           +LS  I+ S +S+VIFS+ YA S WCL+ELV IL+   + GQ+V+PVFY +DP++     
Sbjct: 58  TLSQTIKESYVSVVIFSKNYACSAWCLDELVTILQCNKEMGQVVLPVFYEIDPTEVQELT 117

Query: 119 ----------------CPSLGW-MGIFDIPT----------SESVLIEGNVNDISKKLSD 151
                           C    W   + +I             ES LI+   N   +KL+ 
Sbjct: 118 GSYGNALMNHRKEFENCLVESWSHALMEIAAMAGFVSWNTKPESKLIDEIANRTWEKLNQ 177

Query: 152 LFPSDN-KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
            FP D   D LVG+ S IK+IE  L   S +   +GIWG+GGIGKTT+A  I+  ISS F
Sbjct: 178 AFPYDYCDDGLVGINSCIKDIEQMLCLESKDVRILGIWGMGGIGKTTLARKIFERISSKF 237

Query: 211 EGSYFMQNIRDESEKV---------------------GGLANIHLNFERRRLSRMKVLIV 249
               F+ N+R++ EK                      G    I  +F  + + R K+ IV
Sbjct: 238 HSLCFVANVREKLEKSTLDFLQHEIISKLLGKEYSDHGMSIKISSSFIIKWIMRKKIFIV 297

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ D +QI+ LIG  D + PGSR+IIT+RD Q+LKN        ++EVK+L+Y+++  
Sbjct: 298 LDDVNDSEQINFLIGTRDIYSPGSRIIITSRDKQILKNGDAD----IYEVKKLNYHNAFQ 353

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LF  +AF  N PA   +E++ + ++Y  G+PLAL+VLGS L   + EEW+  + KL+ + 
Sbjct: 354 LFILHAFKGNPPAEALMEVARVAVEYGRGIPLALKVLGSNLYNKNIEEWKDHLKKLEGIS 413

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              I+ VLK+S+D LD +E+ IFLD ACFFK  ++  V N L +   SA IGI  L+ KS
Sbjct: 414 DKKIRNVLKISFDDLDKDEKEIFLDIACFFKSEEKDKVENILSSFGHSAIIGIRSLLDKS 473

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD 489
           L+TISNNKI MHDLLQ+MG +IV QE +K+P KRSRLW P+DIY VL ++  L   I+++
Sbjct: 474 LITISNNKICMHDLLQQMGRDIVLQEGVKNPEKRSRLWIPQDIYHVLTKD--LGKSISIE 531

Query: 490 SL 491
           S+
Sbjct: 532 SI 533


>gi|359493487|ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 275/685 (40%), Positives = 373/685 (54%), Gaps = 71/685 (10%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R +F  HL+ ALC++ I TF+DD+L RG +ISP+L +AIE S+ SI+
Sbjct: 21  KYDVFLSFRGEDTRKSFTDHLHTALCQKGINTFMDDQLRRGEQISPALLNAIEESRFSII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           IFS+ YASS WCL+ELVKIL+     G   +PVFY ++PS        +  +        
Sbjct: 81  IFSDNYASSSWCLDELVKILDCIKVMGHRALPVFYNLNPSHVKKQTGSFAEAFAKHEQEY 140

Query: 124 ---------WM-GIFDIPT---------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W   + ++ T          ES LIE  V DI  KL    PS  K  LVG+
Sbjct: 141 REKMEKVVKWREALTEVATISGWDSRDRHESKLIEEIVRDIWNKLVGTSPSYMKG-LVGM 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ES ++ ++S L   S +   VGIWG+ GIGKTTIA  IY  I + FEG  F+ N+R+ES 
Sbjct: 200 ESRLEAMDSLLSMFSDDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESY 259

Query: 225 KVG--------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           K G                    GL N  +NF +  L   KVLI+  D+   +Q++ L G
Sbjct: 260 KHGLPYLQMELLSQILKERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLAG 319

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             + F  GSR+IITTRD  LL       V  ++EVKEL  +++L LF   AF   H    
Sbjct: 320 YNNWFGLGSRIIITTRDRHLLTCQE---VDAIYEVKELDNDEALKLFCLYAFRHRHGTED 376

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F +L    + Y +G+PLAL+VLGS L      EWES +NKLK+ P+ ++Q VLK S++GL
Sbjct: 377 FRQLCGHALDYTSGLPLALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNVLKTSFEGL 436

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD EQNIFLD A F+KG+D+  V + LD+C F   IGI  L  KSL+TIS NK+ MHDLL
Sbjct: 437 DDNEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLL 496

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKEL--YLGG 498
           QEMG EIVRQ+S + PG+RSRL   EDI  VL  NT      GI LD    KEL   +  
Sbjct: 497 QEMGWEIVRQKS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSESKELNFSIDA 555

Query: 499 CSNLKRFPEIS-CNIE-DLDLKETAIEELPSSIGNL-SRLVDLDLTNCSGLKSVSSRLCN 555
            + +KR   +  CN++ D  L   + +EL +   ++ +    L   N   L   S  L N
Sbjct: 556 FTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLSN 615

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
             +LR L   G   L+  P    + E L  LN+     +++    K   KL  ++L + +
Sbjct: 616 --NLRDLYWHG-YPLKSFPSNF-HPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQ 671

Query: 616 RLQSLPE---LPCGSSIHARHCTSL 637
            L   P+   +P    +  + CTSL
Sbjct: 672 HLTKTPDFSGVPNLRRLILKGCTSL 696



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/207 (41%), Positives = 110/207 (53%), Gaps = 27/207 (13%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRL 535
           SLP  I  L SLK L L GCS LK  P+    + C + +L+   + I+E+P SI  L+ L
Sbjct: 792 SLPRSIFKLKSLKTLTLCGCSELKELPDDLGSLQC-LAELNADGSGIQEVPPSITLLTNL 850

Query: 536 VDLDLTNCSGLKSVSSRLC-----------------NLKSLRRLNLSGC-LKLEKLPEEI 577
             L L  C G  S S  +                   L SLR L L  C L    LP ++
Sbjct: 851 QKLSLAGCKGGDSKSRNMVFSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSDL 910

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTS 636
           G++ SLE L+L+   F  IP+S+  LS+L  L L+ CK LQSLPELP    S++A  CTS
Sbjct: 911 GSIPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCTS 970

Query: 637 LKTLSNSSTLLTRSSKHWDI-FNFSNC 662
           L+T S SS   T S K  D+ FNF+NC
Sbjct: 971 LETFSCSSGAYT-SKKFGDLRFNFTNC 996



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 3/138 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPE+  N+E   +L L+ TAI+ LP SI NL+ L  
Sbjct: 722 SFSSSIHMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLAL 781

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C  L+S+   +  LKSL+ L L GC +L++LP+++G+L+ L  LN      +++P
Sbjct: 782 LNLKECKSLESLPRSIFKLKSLKTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVP 841

Query: 598 SSMKQLSKLSDLRLQNCK 615
            S+  L+ L  L L  CK
Sbjct: 842 PSITLLTNLQKLSLAGCK 859



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 4/137 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            + LK + L    +L + P+ S   N+  L LK  T++ E+  SIG L +L+ L+L  C 
Sbjct: 659 FEKLKSIKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCK 718

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS SS + +++SL+ L LSGC KL+K PE  GN+E L  L+L     + +P S++ L+
Sbjct: 719 KLKSFSSSI-HMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLT 777

Query: 605 KLSDLRLQNCKRLQSLP 621
            L+ L L+ CK L+SLP
Sbjct: 778 GLALLNLKECKSLESLP 794


>gi|451798984|gb|AGF69190.1| TMV resistance protein N-like protein 4 [Vitis labrusca]
          Length = 1049

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 275/807 (34%), Positives = 409/807 (50%), Gaps = 180/807 (22%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE S+  I+
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRFFII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
           +FS+ YA SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 80  VFSKNYAYSRWCLNELVKIIERKSQKESVVLPIFYHVDPSDVRNQRGSFGEALAYHERDA 139

Query: 125 -------MGIFDIPTSESVLIEGN--------------VNDISKKLSDLFPSDNKDQLVG 163
                  +  + I  +++  + G               VN I ++L+   P      +VG
Sbjct: 140 NQEKKEMVQKWRIALTKAAYLSGCHVDDQYETEVVKEIVNTIIRRLNRQ-PLSVGKNIVG 198

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +   +++++S + +   E   +GI G GG+GKTTIA AIY+ IS  ++GS F++N+R+ S
Sbjct: 199 ISVHLEKLKSLMNTELNEVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLRNMRERS 258

Query: 224 ---------EKVGGL----------ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                    E + G+           +  ++  +R LS  +VLI+F D+ +LKQ++ L  
Sbjct: 259 KGDILQLQQELLHGILRGKFFKINTVDEGISMIKRCLSSNRVLIIFDDVDELKQLEYLAE 318

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F   S +IIT+RD  +L  +    V   +EV +L+  +++ LFS  AF QNHP   
Sbjct: 319 EKDWFQAKSTIIITSRDKHVLARYG---VDIPYEVSKLNKEEAIELFSLWAFKQNHPKEV 375

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +  LS  +I YANG+PLAL+VLG+ L G    EWESA+ KLK +PHM+I  VL++S+DGL
Sbjct: 376 YKNLSYNIIDYANGLPLALKVLGASLFGKKISEWESAMCKLKIIPHMEIHNVLRISFDGL 435

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD ++ IFLD ACFFKG+D+Y V   L      AK GI+ L  + L+T+S N++ MHDL+
Sbjct: 436 DDVDKGIFLDVACFFKGDDKYFVSRILGP---HAKHGITTLADRCLITVSKNRLDMHDLI 492

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL--------------PTGINLDS 490
           Q+MG EI+RQE  KDPG+RSRLW   + Y VL  N                 P+ + ++S
Sbjct: 493 QQMGWEIIRQECPKDPGRRSRLW-DSNAYHVLIRNMGTQAIEGLFLDRCKFNPSQLTMES 551

Query: 491 LKE---LYLGGCSNLKR--------------------------FPEISC-------NIED 514
            KE   L L    N +R                          +P  S        N+ +
Sbjct: 552 FKEMNKLRLLKIHNPRRKLFLENHLPRDFEFSAYELRYLHWDGYPLESLPMNFHAKNLVE 611

Query: 515 LDLKETAIEEL--PSSIGNLSRLVDL----------DLTNCSGLKSVSSRLC-------- 554
           L L+++ I+++   + + +  R++DL          DL++   L+ ++   C        
Sbjct: 612 LSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPNLEILTLEGCVNLELLPR 671

Query: 555 ---NLKSLRRLNLSGCLKLEKLPEEIGN-------------------------------- 579
               LK L+ L+ +GC KLE+ PE + N                                
Sbjct: 672 GIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLL 731

Query: 580 ---------------LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                          L SL+ LNL    F  IP ++ QLS+L  L L +C  L+ +PELP
Sbjct: 732 QECSKLHQIPSHICYLSSLKKLNLEGGHFSSIPPTINQLSRLKALNLSHCNNLEQIPELP 791

Query: 625 CG-SSIHARHCTSLKTLSNSSTLLTRS 650
            G  ++   HCTSL+ LS+ S LL  S
Sbjct: 792 SGLINLDVHHCTSLENLSSPSNLLWSS 818


>gi|359486092|ref|XP_002274052.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 919

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 260/659 (39%), Positives = 356/659 (54%), Gaps = 63/659 (9%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R+NF  HL +AL R  I TF DDKL RG  I+P L  AIE S+ S+++
Sbjct: 24  YDVFLSFRGEDTRYNFTDHLYSALGRRGIHTFRDDKLRRGEAIAPELLKAIEESRSSVIV 83

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSLG 123
           FSE YA SRWCL+ELVKI+E +     +V P+FY VDPS             AGY     
Sbjct: 84  FSENYAHSRWCLDELVKIMECQKDPAHVVFPIFYHVDPSHVRKQEGSFGEAFAGY--EEN 141

Query: 124 WMGIFDIPTSESVLIEG------------NVNDISKKLSDLFPS------DNKDQLVGVE 165
           W     IP     L E               N I +  +++F        D    LVG+ 
Sbjct: 142 WKD--KIPRWRRALTEAANLSGWHILDGYESNQIKEITNNIFRQLKCKRLDVGANLVGIG 199

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           S +KE+  +L   S++   VGI G+GGIGKTTIA  +Y+ +S  FE   F++NI + S  
Sbjct: 200 SRVKEMILRLHMESSDVRIVGICGVGGIGKTTIAKVVYNELSCEFECMSFLENIGEVSNT 259

Query: 226 VG--------------GLANIHLNFERRR-------LSRMKVLIVFYDLTDLKQIDLLIG 264
            G              G  + ++N    +       LS  +VL+V  D+    Q++ L+G
Sbjct: 260 QGLSHLQNQLLVDVLEGEVSQNMNGVAHKASMIKDILSSKRVLMVLDDVDHPSQLEYLLG 319

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             +    GSRVIITTR+  +L   +   V +++EVK L++ +   LFS  AF QN P + 
Sbjct: 320 HREWLGEGSRVIITTRNKHVLAVQK---VDNLYEVKGLNFEEDCELFSLYAFKQNLPKSD 376

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +  L+  V+ Y  G+PLAL+VLGS L   +  EWES ++KL R P  +I  VLK SYDGL
Sbjct: 377 YRNLACRVVGYCQGLPLALKVLGSLLFNKTIPEWESELHKLDREPEAEIHNVLKRSYDGL 436

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           D  E+NIFLD ACFFKG D+  V   LD C F AK GI  L  K L+T+  N+I MHDL+
Sbjct: 437 DRTEKNIFLDVACFFKGEDRDFVSRILDGCDFHAKRGIRNLNDKCLITLPYNEIRMHDLI 496

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKR 504
           Q MG EIVR++   +P K SRLW P D  + L     L     +D      L   S   R
Sbjct: 497 QHMGWEIVREKFPDEPNKWSRLWDPCDFERALTAYEDLERLKVIDLSYSRKLIQMSEFSR 556

Query: 505 FPEISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
            P    N+E L L    ++ ++  S+GNL +L  L L +C  LK++   + +L+SL  LN
Sbjct: 557 MP----NLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLESLEILN 612

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           LS C K EK P + GN++SL  L+L +   + +P S+  L  L  L L +C + +  PE
Sbjct: 613 LSYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFEKFPE 671



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 26/167 (15%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  I +L+SL+ L L  CS  ++FPE   N++ L+   L+ TAI++LP SIG+L  L  
Sbjct: 645 LPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLES 704

Query: 538 LDLTNC----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           LD++                        + +K +   + +L+SL  L+LS C K EK PE
Sbjct: 705 LDVSGSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPE 764

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           + GN++SL+ L L     + +P S+  L  L  L L +C + +  PE
Sbjct: 765 KGGNMKSLKKLRLRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPE 811



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 31/174 (17%)

Query: 474 QVLNENTS---LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELP 526
           Q+L  NT+   LP  I +L+SL+ L + G S  ++FPE   N++ L+   L+ TAI++LP
Sbjct: 681 QLLLRNTAIKDLPDSIGDLESLESLDVSG-SKFEKFPEKGGNMKSLNQLLLRNTAIKDLP 739

Query: 527 SSIGNLSRLVDLDLTNCS-----------------------GLKSVSSRLCNLKSLRRLN 563
            SIG+L  L  LDL++CS                        +K +   + +LKSL  L+
Sbjct: 740 DSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKSLEFLD 799

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           LS C K EK PE+ GN++ L  L+L     + +P+++ +L KL  L L +C  L
Sbjct: 800 LSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKLKRLVLSDCSDL 853


>gi|359493572|ref|XP_002270741.2| PREDICTED: uncharacterized protein LOC100261885 [Vitis vinifera]
          Length = 2338

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 265/705 (37%), Positives = 387/705 (54%), Gaps = 102/705 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL  AL    I TF DD+ L RG EI+P L  AIE S+ +IV
Sbjct: 14  YDVFLSFRGEDTRRNFTDHLYKALIHSGIRTFRDDEELRRGEEIAPELLKAIEESRSAIV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQ-IVVPVFYLVDPSDAGYCPSL----------- 122
           +FSE YA S+WCL ELVKI++ K +  Q +V+P+FY VDPS+      +           
Sbjct: 74  VFSETYARSKWCLEELVKIMKCKEEREQMVVIPIFYHVDPSEVRNQTEIYGEAFTHHEKN 133

Query: 123 ----------GW---------MGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                      W         +  +D     ES LI+  + ++ +        +  + +V
Sbjct: 134 AEEERKEKIRKWKTALRQASNLAGYDATNRYESELIDEIIENVLRSFPKTLVVN--ENIV 191

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G++S ++ + S L     +   VG++G+GGIGKTTI +A+Y+ IS+ FE    + ++R E
Sbjct: 192 GMDSRLERLISLLKIELNDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKE 251

Query: 223 SEKVGG--------------------LANIHLNFE--RRRLSRMKVLIVFYDLTDLKQID 260
           S +  G                    L ++H   +  R +LS  KVL+   D+ +L Q++
Sbjct: 252 STENSGLLKLQQQLLNDTLRTTRKIVLRDVHEGIKEIRDKLSSKKVLVFLDDVDELTQLE 311

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            LIG+ D F PGSR+IITTR   LL  H    V  ++EV++L ++++L LF R AF Q+H
Sbjct: 312 HLIGKHDWFGPGSRIIITTRKKDLLTRHE---VNDMYEVEKLYFHEALQLFCRYAFKQHH 368

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P  G+ +LS+ V++YA+G+PLAL+VLGS L G    +W+S + KL+++P+M+I KVLK+S
Sbjct: 369 PKEGYGDLSHQVVQYADGLPLALKVLGSLLFGKRLPDWKSELQKLEKVPNMEIVKVLKIS 428

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKIT 439
           +DGLD  ++ IFLD ACFF+G+D   V   LDA  F+A+ GI+ LV +  +TIS +N+I 
Sbjct: 429 FDGLDYTQRMIFLDIACFFRGDDVKRVSRILDASEFNAESGINALVDRCFITISKDNRID 488

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLKELYLG 497
           MHDLL +MG  IV QE   +PG+RSRLW   DIY+VL  NT      GI L   K   + 
Sbjct: 489 MHDLLAQMGKGIVDQECPNEPGERSRLWRHIDIYRVLKRNTGTEKIEGIYLHVDKSEQIQ 548

Query: 498 GCSN----LKRFPEISCNIEDLDLKET---------------AIEELPSSIGNLSRLVDL 538
             S     + R   +S +   + L +                ++E LPS+  + + LV L
Sbjct: 549 FTSKAFERMHRLRLLSISHNHVQLSKDFVFPYDLTYLRWNGYSLESLPSNF-HANNLVSL 607

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--------EEI----------GNL 580
            L N S +K +      L++LRR+NLS   +L +LP        EE+           N+
Sbjct: 608 ILGN-SNIKLLWKGNMCLRNLRRINLSDSQQLIELPNFSNVPNLEELILSGCIILLKSNI 666

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             LE L L E   +++PSS++ L  L  L L NCK L+ LP   C
Sbjct: 667 AKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSIC 711



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 72/110 (65%), Gaps = 4/110 (3%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLPT I    SLK L+   CS L+ FPEI  N+E   +L L ETAI+ELPSSI +L+RL 
Sbjct: 1119 SLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLNRLE 1178

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
             L+L  C  L ++   +CNL  L  L++S C KL KLP+ +G L+SL++L
Sbjct: 1179 VLNLEGCKKLVTLPESICNLCFLEVLDVSYCSKLHKLPQNLGRLQSLKHL 1228



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 92/183 (50%), Gaps = 22/183 (12%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLPT I    SLK L+   CS L+ FPEI  N+E   +L L ETAI+ELPSSI +L+RL 
Sbjct: 1909 SLPTSIWEFKSLKSLFCSHCSQLQYFPEILENMENLRELHLNETAIKELPSSIEHLNRLE 1968

Query: 537  DLDLTNCSGLKSVSSRLCNLK--SLRRLNLSGCLKLE---------------KLPEEIGN 579
             L+L  C  L    +     K     +L  S CL L+                +P EI +
Sbjct: 1969 VLNLDRCENLLLFKTPQIATKPREAAKLEASPCLWLKFNMLPIAFFVGIDEGGIPTEICH 2028

Query: 580  LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSLK 638
            L SL  L L    F  IPS + QLS L  L L +C+ L+ +P LP    +   H CT L+
Sbjct: 2029 LSSLRQLLLTGNLFRSIPSGVNQLSMLRLLDLGHCQELRQIPALPSSLRVLDVHECTRLE 2088

Query: 639  TLS 641
            T S
Sbjct: 2089 TSS 2091



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 12/108 (11%)

Query: 482 LPTGINLDSLKELYLGGC-----SNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           LP   N+ +L+EL L GC     SN+ +       +E+L L ETAI+ELPSSI  L  L 
Sbjct: 641 LPNFSNVPNLEELILSGCIILLKSNIAK-------LEELCLDETAIKELPSSIELLEGLR 693

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            L+L NC  L+ + + +CNL+ L  L+L GC KL++LPE++  +  LE
Sbjct: 694 YLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRLPEDLERMPCLE 741



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 2/111 (1%)

Query: 515  LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L LK   I  LP  I + S    L L  C  L+S+ + +   KSL+ L  S C +L+  P
Sbjct: 1088 LCLKGQPISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFP 1145

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            E + N+E+L  L+L E   +++PSS++ L++L  L L+ CK+L +LPE  C
Sbjct: 1146 EILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLEGCKKLVTLPESIC 1196



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 1/103 (0%)

Query: 515  LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L LK +AI ELP+ I        L L  C  L+ + S +C LKSL  LN SGC +L   P
Sbjct: 1562 LCLKGSAINELPT-IECPLEFDSLCLRECKNLERLPSSICELKSLTTLNCSGCSRLRSFP 1620

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
            E + ++E+L  L+L     +++P+S++ L  L  L L +C  L
Sbjct: 1621 EILEDVENLRNLHLDGTAIKELPASIQYLRGLQCLNLADCTNL 1663



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)

Query: 515  LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L LK   I  LP  I + S    L L  C  L+S+ + +   KSL+ L  S C +L+  P
Sbjct: 1878 LCLKGQTISLLP--IEHASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSHCSQLQYFP 1935

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
            E + N+E+L  L+L E   +++PSS++ L++L  L L  C+ L
Sbjct: 1936 EILENMENLRELHLNETAIKELPSSIEHLNRLEVLNLDRCENL 1978



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 4/69 (5%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
            LP+ I  L SL  L   GCS L+ FPEI  ++E+L    L  TAI+ELP+SI  L  L  
Sbjct: 1595 LPSSICELKSLTTLNCSGCSRLRSFPEILEDVENLRNLHLDGTAIKELPASIQYLRGLQC 1654

Query: 538  LDLTNCSGL 546
            L+L +C+ L
Sbjct: 1655 LNLADCTNL 1663



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 11/110 (10%)

Query: 487  NLDSLKELYLGGCSNLKRFPEISCNIE--DLDLKETA-IEELPSSIGNLSRLVDLDLTNC 543
            ++ S ++L L G S +   P I C +E   L L+E   +E LPSSI  L  L      NC
Sbjct: 1555 DVQSRRKLCLKG-SAINELPTIECPLEFDSLCLRECKNLERLPSSICELKSLTT---LNC 1610

Query: 544  SG---LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
            SG   L+S    L ++++LR L+L G   +++LP  I  L  L+ LNLA+
Sbjct: 1611 SGCSRLRSFPEILEDVENLRNLHLDG-TAIKELPASIQYLRGLQCLNLAD 1659


>gi|357449443|ref|XP_003594998.1| TMV resistance protein N [Medicago truncatula]
 gi|355484046|gb|AES65249.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 275/725 (37%), Positives = 396/725 (54%), Gaps = 93/725 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           + +SSSS   +     DVF+SFRG D R  F SHLN AL +  ++TFIDD +L +G+EIS
Sbjct: 109 IGASSSSTLEVASNSFDVFISFRGDDTRRKFTSHLNEALKKSGVKTFIDDSELKKGDEIS 168

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
            +L  AIE S  SIVIFSE YASS+WCLNELVKILE K   GQIV+P+FY +DPS     
Sbjct: 169 SALIKAIEESCASIVIFSEDYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRNQ 228

Query: 116 -AGYCPSLG----------W---------MGIFDIPTS--ESVLIEGNVNDISKKLSDLF 153
              Y  +            W         +  +D  +S  ES  I+  V D+ +KL+   
Sbjct: 229 IGSYGQAFAKHEKNLKQQKWKDALTEVSNLSGWDSKSSRIESDFIKDIVKDVLEKLNQRR 288

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           P +   +LVG+E   +EIE    +GS +  T+G+WG+GGIGKT +A  +Y N  S FE  
Sbjct: 289 PVEANKELVGIEKKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKKLYDNYCSQFEYH 348

Query: 214 YFMQNIRDESEKVG-------------GLANIHLNFE----RRRLSRMKVLIVFYDLTDL 256
            F++N+R+ES K G              L +    FE    ++RL R K LIV  D+  L
Sbjct: 349 CFLENVREESTKCGLKVVRKKLFSTLLKLGHDAPYFENPIFKKRLERAKCLIVLDDVATL 408

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q + L     G  PGSRVI+TTRD Q+     G  V    EVK+L+ ++SL LFS NAF
Sbjct: 409 EQAENLKI---GLGPGSRVIVTTRDSQICHQFEGFVVR---EVKKLNEDESLQLFSCNAF 462

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
            + H   G+ ELS   I Y  G PLAL+VLG+ L   S+E WES + K+K +P+  I  V
Sbjct: 463 QEKHAKEGYEELSKSAIGYCRGNPLALKVLGANLCAKSKEAWESELEKIKEIPYAGIHDV 522

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGN----DQY----LVMNFLDACRFSAKIGISRLVGK 428
           LK+S+  LD  +++IFLD ACFF       D Y     +++  +AC+F     I  L+ K
Sbjct: 523 LKLSFYDLDRTQRDIFLDIACFFYPTINEFDCYTQREYIIDLFNACKFYPATSIEVLLHK 582

Query: 429 SLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTG 485
           SL+T    ++I MHDL+ EMG EIV+QE+ KDPGKRSRLW PE IY+V   N+ T     
Sbjct: 583 SLMTFGYCDRIQMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKGTDAVEV 642

Query: 486 INLDSLK--ELYLGG-----------------CSNL---KRFPEISCNIEDLDLKETAIE 523
           I  D+ K  ++YL                   C+N+   +    +S  +  L  +   +E
Sbjct: 643 ILFDTSKIGDVYLSSRSFESMINLRLLHIANKCNNVHLQEGLEWLSDKLSYLHWESFPLE 702

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
            LPS+     +LV+L +T+ S L+ +  R+  L +L  + L     L ++P ++    +L
Sbjct: 703 SLPSTFCP-QKLVELSMTH-SKLRKLWDRIQKLDNLTIIKLDNSEDLIEIP-DLSRAPNL 759

Query: 584 EYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSN 642
           + L+LA      ++  S+    KL +L L+ C +++SL      + IH++   +L  L++
Sbjct: 760 KILSLAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESLV-----TDIHSKSLLTLD-LTD 813

Query: 643 SSTLL 647
            S+L+
Sbjct: 814 CSSLV 818



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 7/166 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SL T I+  SL  L L  CS+L +F   S  +  L L+ T I E  S +   S+L  LDL
Sbjct: 796 SLVTDIHSKSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSSLMLRNSKLDYLDL 855

Query: 541 TNCSGLKSVSSRLCN---LKSLRRLNLSGCLKLEKLPEE--IGNLESLEYLNLAE-KDFE 594
           ++C  L  V  +L N   L+SL  LNLSGC ++  L     +    SLE+L L    + E
Sbjct: 856 SDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDGARSLEFLYLRNCCNLE 915

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
            +P +++    LS L L  C  L SLP+LP     + A +CT L T
Sbjct: 916 TLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAINCTYLDT 961


>gi|357468645|ref|XP_003604607.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355505662|gb|AES86804.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 936

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 265/708 (37%), Positives = 391/708 (55%), Gaps = 99/708 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R +F+SHL ++L    I  F DD+ L RG+ ISPSL  AIE SKIS+
Sbjct: 36  KYDVFLSFRGEDTRASFISHLTSSLQNAGILIFKDDQSLQRGDHISPSLVHAIESSKISV 95

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-CPSLG--------- 123
           ++FS+ YA S+WCL EL +I+      GQ+V+PVFY VDPS+  +     G         
Sbjct: 96  IVFSKNYADSKWCLQELWQIMVRHRTTGQVVLPVFYDVDPSEVRHQTGEFGKSFLNLLNR 155

Query: 124 ------WMGI--------------FDIPTS--ESVLIEGNVNDISKKL--SDLFPSDNKD 159
                 WM +              F +  S  ES +I+  V ++++ L  +DLF +DN  
Sbjct: 156 ISHEEKWMALEWRNELRVAAGLAGFVVLNSRNESEVIKDIVENVTRLLDKTDLFVADNP- 214

Query: 160 QLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG++S ++++   L +  T +   +G+WG+GGIGKTT+A AIY+ I  +FEG  F+ N
Sbjct: 215 --VGIDSRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIAN 272

Query: 219 IRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLK 257
           IR+   K  G  N+                      ++    RL   +VL+V  D+  L 
Sbjct: 273 IREVWGKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILNGRLCHKRVLLVLDDVNKLD 332

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++ L G    F PGSR+IITTRD  +L   RG+RV  ++ +KE+  ++SL LFS +AF 
Sbjct: 333 QLNALCGSCKWFAPGSRIIITTRDKHIL---RGNRVDKIYIMKEMDESESLELFSWHAFK 389

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           Q  P+  F E+S  V++Y+  +PLAL+VLGSYL      EW   + KLKR+P+  + + L
Sbjct: 390 QARPSKDFSEISTNVVQYSGRLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQKL 449

Query: 378 KVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN- 435
           K+SYDGL DD E++IFLD ACFF G D+  V++ L+   F A+IGIS LV +SLVT+ + 
Sbjct: 450 KISYDGLNDDTEKSIFLDIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDK 509

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT--------------- 480
           NK+ MHDLL++MG EI+R++S  +P +RSRLW  +D+  VL+E+T               
Sbjct: 510 NKLGMHDLLRDMGREIIREKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKMPCH 569

Query: 481 -----SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
                S  T  N+  L+ L L G      F  IS N++ L      +  +PS+      +
Sbjct: 570 SAQRFSTKTFENMKKLRLLQLSGVQLDGDFKYISRNLKWLHWNGFPLRCIPSNFYQ-RNI 628

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
           V ++L N S  K V   +  ++ L+ LNLS    L + P +   L +LE L L +     
Sbjct: 629 VSIELEN-SNAKLVWKEIQRMEQLKILNLSHSHHLTQTP-DFSYLPNLEKLVLEDCPRLS 686

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSN 642
           ++  S+  L K+  + L++C  L SLP          R+  +LKTL+ 
Sbjct: 687 QVSHSIGHLKKVVLINLKDCISLCSLP----------RNIYTLKTLNT 724



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK L L    +L + P+ S   N+E L L++   + ++  SIG+L ++V ++L +C 
Sbjct: 648 MEQLKILNLSHSHHLTQTPDFSYLPNLEKLVLEDCPRLSQVSHSIGHLKKVVLINLKDCI 707

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L S+   +  LK+L  L LSGCL ++KL E++  +ESL  L        K+P S+
Sbjct: 708 SLCSLPRNIYTLKTLNTLILSGCLMIDKLEEDLEQMESLTTLIANNTGITKVPFSL 763


>gi|193584700|gb|ACF19650.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1098

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 265/708 (37%), Positives = 391/708 (55%), Gaps = 99/708 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R +F+SHL ++L    I  F DD+ L RG+ ISPSL  AIE SKIS+
Sbjct: 36  KYDVFLSFRGEDTRASFISHLTSSLQNAGILIFKDDQSLQRGDHISPSLVHAIESSKISV 95

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-CPSLG--------- 123
           ++FS+ YA S+WCL EL +I+      GQ+V+PVFY VDPS+  +     G         
Sbjct: 96  IVFSKNYADSKWCLQELWQIMVRHRTTGQVVLPVFYDVDPSEVRHQTGEFGKSFLNLLNR 155

Query: 124 ------WMGI--------------FDIPTS--ESVLIEGNVNDISKKL--SDLFPSDNKD 159
                 WM +              F +  S  ES +I+  V ++++ L  +DLF +DN  
Sbjct: 156 ISHEEKWMALEWRNELRVAAGLAGFVVLNSRNESEVIKDIVENVTRLLDKTDLFVADNP- 214

Query: 160 QLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG++S ++++   L +  T +   +G+WG+GGIGKTT+A AIY+ I  +FEG  F+ N
Sbjct: 215 --VGIDSRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTTVAKAIYNKIGRNFEGRSFIAN 272

Query: 219 IRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLK 257
           IR+   K  G  N+                      ++    RL   +VL+V  D+  L 
Sbjct: 273 IREVWGKDCGQVNLQEQLMYDIFKETTTKIQNVESGISILNGRLCHKRVLLVLDDVNKLD 332

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++ L G    F PGSR+IITTRD  +L   RG+RV  ++ +KE+  ++SL LFS +AF 
Sbjct: 333 QLNALCGSCKWFAPGSRIIITTRDKHIL---RGNRVDKIYIMKEMDESESLELFSWHAFK 389

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           Q  P+  F E+S  V++Y+  +PLAL+VLGSYL      EW   + KLKR+P+  + + L
Sbjct: 390 QARPSKDFSEISTNVVQYSGRLPLALEVLGSYLFDREVTEWICVLEKLKRIPNDQVHQKL 449

Query: 378 KVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN- 435
           K+SYDGL DD E++IFLD ACFF G D+  V++ L+   F A+IGIS LV +SLVT+ + 
Sbjct: 450 KISYDGLNDDTEKSIFLDIACFFIGMDRNDVIHILNGSGFFAEIGISVLVERSLVTVDDK 509

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT--------------- 480
           NK+ MHDLL++MG EI+R++S  +P +RSRLW  +D+  VL+E+T               
Sbjct: 510 NKLGMHDLLRDMGREIIREKSPMEPEERSRLWFHDDVLDVLSEHTGTKAVEGLTLKMPCH 569

Query: 481 -----SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
                S  T  N+  L+ L L G      F  IS N++ L      +  +PS+      +
Sbjct: 570 SAQRFSTKTFENMKKLRLLQLSGVQLDGDFKYISRNLKWLHWNGFPLRCIPSNFYQ-RNI 628

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
           V ++L N S  K V   +  ++ L+ LNLS    L + P +   L +LE L L +     
Sbjct: 629 VSIELEN-SNAKLVWKEIQRMEQLKILNLSHSHHLTQTP-DFSYLPNLEKLVLEDCPRLS 686

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSN 642
           ++  S+  L K+  + L++C  L SLP          R+  +LKTL+ 
Sbjct: 687 QVSHSIGHLKKVVLINLKDCISLCSLP----------RNIYTLKTLNT 724



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK L L    +L + P+ S   N+E L L++   + ++  SIG+L ++V ++L +C 
Sbjct: 648 MEQLKILNLSHSHHLTQTPDFSYLPNLEKLVLEDCPRLSQVSHSIGHLKKVVLINLKDCI 707

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L S+   +  LK+L  L LSGCL ++KL E++  +ESL  L        K+P S+
Sbjct: 708 SLCSLPRNIYTLKTLNTLILSGCLMIDKLEEDLEQMESLTTLIANNTGITKVPFSL 763


>gi|359477831|ref|XP_002282906.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 879

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 258/734 (35%), Positives = 388/734 (52%), Gaps = 132/734 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE S+  I+
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRFFII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGWM---- 125
           +FS+ YA SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 80  VFSKNYAYSRWCLNELVKIIERKSQKESVVLPIFYHVDPSDVRNQRGSFGEALAYHERDA 139

Query: 126 ----------------------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                                 G       E+ +++  VN I ++L+    S  K+ +VG
Sbjct: 140 NQEKKEMVQKWRIALTKAAYLSGCHVDDQYETEVVKEIVNTIIRRLNRQPLSVGKN-IVG 198

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +   +++++S + +   E   +GI G GG+GKTTIA AIY+ IS  ++GS F++N+R+ S
Sbjct: 199 ISVHLEKLKSLMNTELNEVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLRNMRERS 258

Query: 224 ---------EKVGGL----------ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                    E + G+           +  ++  +R LS  +VLI+F D+ +LKQ++ L  
Sbjct: 259 KGDILQLQQELLHGILRGKFFKINTVDEGISMIKRCLSSNRVLIIFDDVDELKQLEYLAE 318

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F   S +IIT+RD  +L  +    V   +EV +L+  +++ LFS  AF QNHP   
Sbjct: 319 EKDWFQAKSTIIITSRDKHVLARYG---VDIPYEVSKLNKEEAIELFSLWAFKQNHPKEV 375

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +  LS  +I YANG+PLAL+VLG+ L G    EWESA+ KLK +PHM+I  VL++S+DGL
Sbjct: 376 YKNLSYNIIDYANGLPLALKVLGASLFGKKISEWESAMCKLKIIPHMEIHNVLRISFDGL 435

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD ++ IFLD ACFFKG+D+Y V   L      AK GI+ L  + L+T+S N++ MHDL+
Sbjct: 436 DDVDKGIFLDVACFFKGDDKYFVSRILGP---HAKHGITTLADRCLITVSKNRLDMHDLI 492

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL--------------PTGINLDS 490
           Q+MG EI+RQE  KDPG+RSRLW   + Y VL  N                 P+ + ++S
Sbjct: 493 QQMGWEIIRQECPKDPGRRSRLW-DSNAYHVLIRNMGTQAIEGLFLDRCKFNPSQLTMES 551

Query: 491 LKE---LYLGGCSNLKR--------------------------FPEISC-------NIED 514
            KE   L L    N +R                          +P  S        N+ +
Sbjct: 552 FKEMNKLRLLKIHNPRRKLFLENHLPRDFEFSAYELRYLHWDGYPLESLPMNFHAKNLVE 611

Query: 515 LDLKETAIEEL--PSSIGNLSRLVDL----------DLTNCSGLKSVSSRLC-------- 554
           L L+++ I+++   + + +  R++DL          DL++   L+ ++   C        
Sbjct: 612 LSLRDSNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDLSSVPNLEILTLEGCVNLELLPR 671

Query: 555 ---NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
               LK L+ L+ +GC KLE+ PE + N+  L  L+L+      +PSS+  L+ L  L L
Sbjct: 672 GIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLL 731

Query: 612 QNCKRLQSLPELPC 625
           Q C +L  +P   C
Sbjct: 732 QECSKLHQIPSHIC 745



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 74/147 (50%), Gaps = 28/147 (19%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP GI  L  L+ L   GCS L+RFPEI  N+  L   DL  TAI +LPSSI +L+ L  
Sbjct: 669 LPRGIYKLKHLQTLSCNGCSKLERFPEIMANMRKLRVLDLSGTAIMDLPSSITHLNGLQT 728

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L  CS                        KL ++P  I  L SL+ LNL    F  IP
Sbjct: 729 LLLQECS------------------------KLHQIPSHICYLSSLKKLNLEGGHFSSIP 764

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELP 624
            ++ QLS+L  L L +C  L+ +PELP
Sbjct: 765 PTINQLSRLKALNLSHCNNLEQIPELP 791


>gi|255563218|ref|XP_002522612.1| phosphoprotein phosphatase [Ricinus communis]
 gi|223538088|gb|EEF39699.1| phosphoprotein phosphatase [Ricinus communis]
          Length = 838

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/542 (41%), Positives = 322/542 (59%), Gaps = 60/542 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS+SS+    P  K+DVFLSFRG D R+ F+SHL  AL  ++I  F D+ L+RG +IS 
Sbjct: 1   MASTSSTP---PQWKYDVFLSFRGLDTRNGFLSHLFKALREKQIIAFKDENLDRGEQISD 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
           +LS  IE S + +VI S+ Y  S WCL+ELVKIL+   + GQ+V+PVFY +DP++     
Sbjct: 58  TLSRTIEESYVLVVILSKNYVDSPWCLDELVKILQCNKEKGQVVLPVFYEIDPTEVQELT 117

Query: 116 AGYCPSL-----------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSD 151
             Y  +L                       G  G        ES LIE  V+ I ++L+ 
Sbjct: 118 GSYADALMNHRKEFEDCLVESWSHALKEIAGMAGFVSRNMKPESKLIEEIVDHIWERLNQ 177

Query: 152 LFPSDNKDQ-LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
            F   + D  LVG+ S IK+IE  L   S +   +GIWG+GGIGKTTIAS I+  ISS F
Sbjct: 178 TFSYYHYDDGLVGINSRIKDIELILCLESKDVRILGIWGMGGIGKTTIASKIFDQISSQF 237

Query: 211 EGSYFMQNIRDESEK---------------------VGGLANIHLNFERRRLSRMKVLIV 249
           E   F+ N+R++ EK                     +G    +  +F R+ ++R KVLIV
Sbjct: 238 ERICFVANVREKLEKSTLDSLQQEILTKLLGKEYSDLGMPIKLSSSFIRKWITRKKVLIV 297

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ D +Q   L+G  D + PGSR+I+T+RD Q+LKN        ++EVK+L+Y+++  
Sbjct: 298 LDDVNDSEQTKFLVGARDIYSPGSRIIMTSRDKQILKNGGA----EIYEVKKLNYHNAFQ 353

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LF   AF +N PA   +E++ + ++Y  G+PLAL+VLGS L   + +EW   + KL+ + 
Sbjct: 354 LFILRAFKENPPAEALMEVTRMAVEYGQGIPLALKVLGSTLCDKNIKEWRDHLKKLEGIS 413

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              IQ VL++S+D LD++E+ IFLD ACFFK  D+  V + L +   SA  GI  L  KS
Sbjct: 414 DKKIQNVLRISFDDLDEDEKEIFLDIACFFKSEDKNEVESILSSFGRSAITGIRILQDKS 473

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD 489
           L+T+SN KI MHDLLQ+MG +IVRQE +KDP KRSRLW+P+DIY +L  +  L   I+++
Sbjct: 474 LITVSNEKIEMHDLLQQMGRDIVRQEGVKDPRKRSRLWNPQDIYHLLTND--LGKNISVE 531

Query: 490 SL 491
           S+
Sbjct: 532 SI 533


>gi|147815446|emb|CAN68384.1| hypothetical protein VITISV_018351 [Vitis vinifera]
          Length = 940

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 267/666 (40%), Positives = 371/666 (55%), Gaps = 73/666 (10%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R+NF +HL   L  + I TFID+ KL RG  +S +L SAIE S  SI
Sbjct: 15  RYDVFLSFRGEDTRNNFTAHLCEELHTKGINTFIDEEKLERGQAVSAALVSAIENSMFSI 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG--------- 123
           ++ SE YASSRWCL ELVKI++     G  V+P+FY VDPSD   +    G         
Sbjct: 75  IVLSENYASSRWCLEELVKIIQCMKNSGHRVLPIFYNVDPSDVRNHMGKFGEALAKHEEN 134

Query: 124 ----------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W       T+          ES+LI+  V DI  KL     SD  + LVG
Sbjct: 135 SKEGMERVQIWKDALTQVTNFSGWDSRNKNESLLIKQIVKDILNKLLSTSSSD-IENLVG 193

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +++ I+E+++ L   S +   VGIWG+GGIGKTT+  A+YS IS  FEG  F++N+ ++ 
Sbjct: 194 IDARIQEMKTLLCLASDDVRMVGIWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEDL 253

Query: 224 EKVGG-----------LANIHLNFE-----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
           +K G            L   +LN +     + RL   KVLIV  ++ D   ++ LIG  D
Sbjct: 254 KKKGLIGLQEKLLSHLLEEENLNMKELTSIKARLHSKKVLIVLDNVNDPTILECLIGNQD 313

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F  GS +IITTRD +LL +H+ +    +++V + + +++L   +R +         FLE
Sbjct: 314 WFGRGSTIIITTRDKRLLLSHKIN----LYKVHKFNDDEALEFLARYSLKHELLREDFLE 369

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LS +VI YA G+PLAL VLGS+L  MS+EEW   ++KLK +P+M I +VLK+SYDGLD E
Sbjct: 370 LSRVVICYAQGLPLALTVLGSFLFSMSKEEWRDQLDKLKSIPNMKIHEVLKISYDGLDFE 429

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           E+NIFLD ACF KG D+  V   LD C F +  GI  L  KSL++  +N+I MHDL+QEM
Sbjct: 430 EKNIFLDIACFLKGEDKNYVKEILDYCGFFSVSGIRALADKSLISFFHNRIMMHDLIQEM 489

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS--LPTGINLDSLKELYLGGCSNLKRF 505
           G EIVRQES  +PG+RSRLW  +DI   L +NT      GI LD      +   S  + F
Sbjct: 490 GMEIVRQES-HNPGQRSRLWLHKDINDALKKNTENGKIEGIFLDLSHSQEIIDFST-QAF 547

Query: 506 PEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
           P +   +  L + E+   ++  + G+      L+  NC    S   R C    LR L L 
Sbjct: 548 PRMY-KLRLLKVYES--NKISRNFGD-----TLNKENCKVHFSPKLRFC-YDELRYLYLY 598

Query: 566 GCLKLEKLPEEI--GNLESLE----YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           G   L+ L  +    NL  L     ++N   K   K+  S+  L+KL+ L L+NC++L+S
Sbjct: 599 G-YSLKSLDNDFXAKNLVHLSMHYSHINRLWKGI-KVHPSLGVLNKLNFLSLKNCEKLKS 656

Query: 620 LPELPC 625
           LP   C
Sbjct: 657 LPSSMC 662



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 9/107 (8%)

Query: 489 DSLKELYLGGCS--------NLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           D L+ LYL G S          K    +S +   ++     I+  PS +G L++L  L L
Sbjct: 590 DELRYLYLYGYSLKSLDNDFXAKNLVHLSMHYSHINRLWKGIKVHPS-LGVLNKLNFLSL 648

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
            NC  LKS+ S +C+LKSL    LSGC +LE  PE  GNLE L+ L+
Sbjct: 649 KNCEKLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELH 695


>gi|359493349|ref|XP_002277814.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1260

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 270/715 (37%), Positives = 373/715 (52%), Gaps = 116/715 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+ VFLSFRG+D R+NF  HL  AL ++ IETF+DDK L  G EISP+L +AI+ S+ SI
Sbjct: 19  KYAVFLSFRGEDTRNNFTGHLYKALDQKGIETFMDDKKLRTGEEISPTLVTAIQRSRCSI 78

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG--------- 123
           ++ SE YASS+WCL ELV ILE K      VVP+FY VDPS       S G         
Sbjct: 79  IVLSENYASSKWCLEELVMILECKRTKNLKVVPIFYNVDPSHVRNQTGSFGEALAKHKEN 138

Query: 124 ----------WM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                     W           G+  +    E+ LIE  + DISK L  + P  +   LV
Sbjct: 139 LKIKVEKVQKWREALTQVANLSGLHSVKNKPEAQLIEEIIADISKDLYSV-PLKDAPNLV 197

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI--- 219
            V+S I+E+ES L   S +   VGIWG+GGIGKTT+A AIY  IS  FEG  F+ N+   
Sbjct: 198 AVDSCIRELESLLCLPSMDVRMVGIWGMGGIGKTTLARAIYEQISGQFEGCCFLPNVEHL 257

Query: 220 ---------RDESEKVGGLANIHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
                    ++   KV    NI +     + R    KVLIV  ++     +  L+G LD 
Sbjct: 258 ASKGDDYLRKELLSKVLRDKNIDVTITSVKARFHSKKVLIVIDNVNHRSILKTLVGELDW 317

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F P SR+IITTRD  +L  H    V  ++EV++L  + ++ LF+ +AF  + P    +EL
Sbjct: 318 FGPQSRIIITTRDKHVLTMH---GVDVIYEVQKLQDDKAIELFNHHAFINHPPTEDVMEL 374

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           S  VI YA G+PLAL+VLGS L   S++EWE A+NKL+++P M+I+KVL+ S+D LDD++
Sbjct: 375 SQRVIAYAQGLPLALEVLGSSLCKKSKDEWECALNKLEKIPDMEIRKVLQTSFDELDDDQ 434

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           +NIFLD A FF   ++      L++  FSA  GI  L+ KSL+   ++++ MHDLL EMG
Sbjct: 435 KNIFLDIAIFFNEVEEDFTTEMLNSFGFSAISGIRTLIDKSLIGNLDDELHMHDLLIEMG 494

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGINLDSLKEL-----YLGGC 499
            EIVR+ S K+PGKR+RLW  +DI  VL +NT          NL  LKE+       G  
Sbjct: 495 KEIVRRTSPKEPGKRTRLWEQQDICHVLEKNTGTDEVEVIDFNLSGLKEICFTTEAFGNM 554

Query: 500 SNLK-----------------RFPEISCNIED-----------LDLKETAIEELPSSI-- 529
           S L+                 R  +   +I D           L  +E  ++ LPS    
Sbjct: 555 SKLRLLAIHESSLSDDSECSSRLMQCQVHISDDFKFHYDELRFLLWEEYPLKSLPSDFKS 614

Query: 530 ----------GNLSRLVD----------LDLTNCSGLKSVS--SRLCNLKSLRRLNLSGC 567
                      +L+RL +          +DL++   L      SR+ NLK    L+  GC
Sbjct: 615 QNLVYLSMTKSHLTRLWEGNKVFKNLKYIDLSDSKYLAETPDFSRVTNLK---MLSFEGC 671

Query: 568 LKLEKLPEEIGNLESLEYLNLAEK-DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +L K+   +G+L+ L  LN     + E  P  + QL  L  L L  C +L+  P
Sbjct: 672 TQLHKIHSSLGDLDKLCRLNFKNCINLEHFP-GLDQLVSLEALNLSGCSKLEKFP 725



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 93/172 (54%), Gaps = 20/172 (11%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEIS----CNIEDLDLKETAIEELPSSIGNLSRLVD 537
            P    L SL+ L L GCS L++FP IS    C +  L    TAI ELPSSI   ++LV 
Sbjct: 701 FPGLDQLVSLEALNLSGCSKLEKFPVISQPMHC-LSKLCFDGTAITELPSSIAYATKLVV 759

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL NC  L S+ S +C L  L  L+LSGC +L K      NL++L             P
Sbjct: 760 LDLQNCEKLLSLPSSICKLAHLETLSLSGCSRLGKPQVNSDNLDAL-------------P 806

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI--HARHCTSLKTLSNSSTLL 647
             + +LS L +L+LQ+C+ L++LP LP    +   + +CTSL+ +S  S  L
Sbjct: 807 RILDRLSHLRELQLQDCRSLRALPPLPSSMELINASDNCTSLEYISPQSVFL 858



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           T + ++ SS+G+L +L  L+  NC  L+     L  L SL  LNLSGC KLEK P     
Sbjct: 672 TQLHKIHSSLGDLDKLCRLNFKNCINLEHFPG-LDQLVSLEALNLSGCSKLEKFPVISQP 730

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           +  L  L        ++PSS+   +KL  L LQNC++L SLP   C
Sbjct: 731 MHCLSKLCFDGTAITELPSSIAYATKLVVLDLQNCEKLLSLPSSIC 776


>gi|147778859|emb|CAN73697.1| hypothetical protein VITISV_038484 [Vitis vinifera]
          Length = 784

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 265/684 (38%), Positives = 376/684 (54%), Gaps = 114/684 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R++F +HL   L  + I TFIDD KL RG+ IS +L +AI+ SK S+V
Sbjct: 10  YDVFLSFRGEDTRNSFTAHLYKELRTKGINTFIDDDKLERGDVISSALVAAIQNSKFSLV 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------ 123
           + SE YASS WCL ELVKILE     GQ V+P+FY VDPS     +  +  +L       
Sbjct: 70  VLSENYASSGWCLEELVKILECMRTMGQRVLPIFYDVDPSHVRQHNGKFGEALAKHEENL 129

Query: 124 --------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                   W           G       E +LI+G    I  KL     +     LVG+E
Sbjct: 130 RTMERVPIWRDALTQVANLSGWDSRNKHEPMLIKGIATYIWNKLFSRSSNYADQNLVGIE 189

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           S I+EI+S L + S +   VGIWG+GGIGKTT+A A+Y+ IS  FE   F++N+ D  EK
Sbjct: 190 SSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHZFEACCFLENVSDYLEK 249

Query: 226 VGGLA-----------NIHLNFE-----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
              L+           + +LN +     +  L   KVLIV  D+ + K ++ LIG+   F
Sbjct: 250 QDFLSLQKKFLSQLLEDENLNIKGCISIKALLCSKKVLIVIDDVNNSKILEDLIGKHGWF 309

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
             GSR+IITTR+ QLL  H    V  V+EV++L+ ++++ LFSR AF + HP   ++ELS
Sbjct: 310 GIGSRIIITTRNKQLLVTH---GVNEVYEVEKLNDDNAVELFSRYAFKKAHPIDDYVELS 366

Query: 330 NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQ 389
             ++ YA G+PLALQVL                                       D E+
Sbjct: 367 QCIVVYAQGLPLALQVL---------------------------------------DNER 387

Query: 390 NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG 449
           +IFLD ACFF+G+D+  VM    +C F   IGI  L+ KSL+++  NK+ +H+LLQ+MG 
Sbjct: 388 DIFLDIACFFQGHDKXYVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMIHNLLQKMGR 447

Query: 450 EIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGINLD--SLKELYLGGCS----N 501
           EIVR+ S K+PGK SRLW  +D+  VL +NT      GI+LD  SLKE+     +    N
Sbjct: 448 EIVREASPKEPGKXSRLWIHDDVNHVLTKNTGTKDVEGISLDLSSLKEINFTNEAFAPMN 507

Query: 502 LKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
             R  ++  N++ ++LK +   +  +   + SR+ +L+  +     S+S+  CN+     
Sbjct: 508 RLRLLKVLENLKFMNLKHS---KFLTETLDFSRVTNLERLSSLKTLSLSA--CNISDGAT 562

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L            + +G L SLE L+L+E +F  +PS++ +L  L  L L+NCKRLQ+LP
Sbjct: 563 L------------DSLGFLSSLEDLDLSENNFVTLPSNIXRLPXLKMLGLENCKRLQALP 610

Query: 622 ELPCG-SSIHARHCTSLKTLSNSS 644
           ELP    SI AR+CTSL+T+SN S
Sbjct: 611 ELPTSIRSIMARNCTSLETISNQS 634


>gi|297807789|ref|XP_002871778.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317615|gb|EFH48037.1| hypothetical protein ARALYDRAFT_488633 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1281

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 253/688 (36%), Positives = 366/688 (53%), Gaps = 92/688 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K DVF+SFRG+DVR  FVSHL     R  I  F DD  L RG  ISP L  AI+GS+ +I
Sbjct: 15  KTDVFVSFRGEDVRKTFVSHLFCEFDRMGINAFRDDLDLQRGKSISPELIDAIKGSRFAI 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YA+S WCL+EL+KI+E K+   Q ++P+FY VDPSD                  
Sbjct: 75  VVVSRNYAASSWCLDELLKIMECKDTISQTILPIFYEVDPSDVRRQRGSFGEDVESHSDK 134

Query: 117 ----GYCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                +  +L  +       S     ES LI+  V DIS KL  L   D+   L+G+   
Sbjct: 135 EKVRKWKEALKKLAAISGEDSRNWRDESKLIKKIVRDISDKLV-LTSRDDSKGLIGMSFH 193

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG 227
           +  ++S +     +   VGIWG+GG+GKTTIA  +Y+ +S  F+   FM+N+++   +  
Sbjct: 194 LDFLQSMMSIEDKDVRMVGIWGMGGVGKTTIAKYLYNQLSGRFQAHCFMENVKEVCNRY- 252

Query: 228 GLANIHLNFE---------------------RRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
           G+  +   F                      R R    +VLIV  D+   +Q++ L+  +
Sbjct: 253 GVRRLQEEFLCRMFRERHKEAWGSVSCCSMIRERFRHKRVLIVLDDVDRSEQLNELVKEI 312

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN-HPAAGF 325
           D F PGSR+I+TTRD  LL +H    +  V++VK L   ++L LF   AF +      GF
Sbjct: 313 DWFGPGSRIIVTTRDRHLLLSH---GIDLVYKVKCLPKREALQLFCNYAFREEIRIPHGF 369

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            ELS   I YA+G+PLAL+VLGS+L   S+ EWES + +LK  PH DI +VL+VSYDGLD
Sbjct: 370 QELSVQAINYASGLPLALRVLGSFLYRRSQREWESTLARLKTYPHSDIMEVLRVSYDGLD 429

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           ++E+ IFL  +CF+       V   LD C F+A+IGI+ L  KSL+ +SN  I MHDLL+
Sbjct: 430 EQEKAIFLYISCFYNMKHVDYVTKLLDICGFAAEIGITILTEKSLIFVSNGNIKMHDLLE 489

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI--NLDSLKELY-----L 496
           +MG EIVRQ+++ +P +R  +W PEDI  +L+EN  T L  GI  NL  + E++      
Sbjct: 490 QMGREIVRQQAVNNPAQRLLVWDPEDICDLLSENSGTQLVEGISLNLSEISEVFASDRAF 549

Query: 497 GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC-- 554
            G SNLK       N  DL         LP+ +  L R +     +   LK++ SR C  
Sbjct: 550 EGLSNLKLL-----NFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFCPE 604

Query: 555 --------------------NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
                                L +L++++LS C  L ++P ++    +LE LNL+  +  
Sbjct: 605 FLVELCMSNSDLEKLWDGIQPLTNLKKMDLSRCKYLVEIP-DLSKATNLEELNLSYCQSL 663

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            ++  S+K L  LS   + NC +L+++P
Sbjct: 664 VEVTPSIKNLKGLSCFYMTNCIQLKNIP 691



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 94/162 (58%), Gaps = 21/162 (12%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           ++P GI L SL+ + + GCS+L  FPEIS N   L L  T IEELPSSI  LS LV+LD+
Sbjct: 689 NIPIGITLKSLETVRMSGCSSLMHFPEISWNTRRLYLSSTKIEELPSSISRLSCLVELDM 748

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL----------------- 583
           ++C  L+++ S L +L SL+ LNL GC +LE LP  + NL SL                 
Sbjct: 749 SDCQRLRTLPSYLRHLVSLKSLNLDGCKRLENLPGTLQNLTSLETLEVSGCLNVNEFPRV 808

Query: 584 ----EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
               E L ++E   E+IP+ +  LS+L  L +   KRL+SLP
Sbjct: 809 ATNIEVLRISETSIEEIPARICNLSQLRSLDISENKRLKSLP 850



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 24/151 (15%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           NL SL+ L + GC N+  FP ++ NIE L + ET+IEE+P+ I NLS+L  LD++    L
Sbjct: 787 NLTSLETLEVSGCLNVNEFPRVATNIEVLRISETSIEEIPARICNLSQLRSLDISENKRL 846

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLE------------------------KLPEEIGNLES 582
           KS+   +  L+SL +L LSGC  LE                        +LPE IGNL +
Sbjct: 847 KSLPLSISKLRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTSIKELPENIGNLVA 906

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
           LE L  +     + P S+ +L++L  L + N
Sbjct: 907 LEVLQASRTVIRRAPRSIARLTRLQVLAIGN 937



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 105/196 (53%), Gaps = 36/196 (18%)

Query: 481  SLPTGIN-LDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETAIEELPSSIGNL--- 532
            SLP  I+ L SL++L L GCS L+ FP   C     +   DL  T+I+ELP +IGNL   
Sbjct: 848  SLPLSISKLRSLEKLKLSGCSVLESFPPEICQTMSCLRWFDLDRTSIKELPENIGNLVAL 907

Query: 533  -----------------SRLVDLDL--------TNCSGLKSVSSRLCNLKSLRRLNLSGC 567
                             +RL  L +        T    L S+   L     LR L+LS  
Sbjct: 908  EVLQASRTVIRRAPRSIARLTRLQVLAIGNSLYTPEGLLHSLCPPLARFDDLRALSLSN- 966

Query: 568  LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELPCG 626
            + + ++P  IGNL +L  ++L+   FE IP+S+K+L++L+ L L NC+RLQ+LP ELP G
Sbjct: 967  MNMVEIPNSIGNLWNLLEIDLSGNSFEFIPASIKRLTRLNRLNLNNCQRLQALPDELPRG 1026

Query: 627  -SSIHARHCTSLKTLS 641
               I+  +CTSL ++S
Sbjct: 1027 LLYIYIHNCTSLVSIS 1042


>gi|356528847|ref|XP_003533009.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1137

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 273/723 (37%), Positives = 408/723 (56%), Gaps = 94/723 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           + ++SSS+++    K+DVF+SFRG+D R +F SHL+AAL R  IET+ID ++ +G E+  
Sbjct: 10  VGNASSSLSLSVTKKYDVFISFRGEDTRGDFTSHLHAALGRSSIETYIDYRIQKGEEVWV 69

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQI-VVPVFYLVDPSD---- 115
            L  AI+GS + +VIFSE YA+S WCLNELV+++E + +  ++ V+PVFY +DPS     
Sbjct: 70  ELVKAIKGSTLFLVIFSENYANSSWCLNELVELMECRKQEEEVHVIPVFYKIDPSQVRKQ 129

Query: 116 -AGYCPSLG---WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQ 160
              Y  ++    W   +++             +E+ LIE  +  + +KL+  +  D +  
Sbjct: 130 TGSYRAAVANQKWKDALYEAANLSGFHSHTYRTETDLIEDIIKVVLQKLNHKYTYDFRGL 189

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            +  E+    IES L   S E   +GIWG GGIGKTT+A+AI+  +S  +EG+ F++N+ 
Sbjct: 190 FISDENYTS-IESLLKIDSMEVRVIGIWGKGGIGKTTLAAAIFHKVSFQYEGTCFLENVA 248

Query: 221 DESEKVG----------GLANIHLNFER---------RRLSRMKVLIVFYDLTDLKQIDL 261
           +ES++ G           L    +N +          +RL R KV IV  D+   + ++ 
Sbjct: 249 EESKRHGLNYACNKLFSKLLREDINIDTNKVIPSNVPKRLRRKKVFIVLDDVNTPQLLEN 308

Query: 262 LIGR-LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           L+G   +    GSRVI+TTRD  +LK+ RG  V  + EVKE+++++SL LFS NAFG+ +
Sbjct: 309 LVGAGAEWLGAGSRVIVTTRDRHVLKS-RG--VEKIHEVKEMNFHNSLKLFSLNAFGKTY 365

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   + ELS  V+ YA G+PLAL+VLGS+L+  SE EW+SA+ KLK++P+ +IQ VL++S
Sbjct: 366 PTEEYEELSKRVMVYAKGIPLALKVLGSFLRSKSENEWDSALTKLKKIPNQEIQTVLRLS 425

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK--- 437
           YDGLDD ++NIFLD ACFFKG     V   L+AC FSA IGI  L+ K+L+T + +    
Sbjct: 426 YDGLDDGDKNIFLDIACFFKGQKGDSVTKVLNACGFSADIGIKNLLDKALITTTTDMHDS 485

Query: 438 -----ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLK 492
                I MHDL+QEMG  IVR+ESI +PG+RSRLW PE++  VL  NT   TG    +++
Sbjct: 486 TTDSCIDMHDLIQEMGRGIVREESIDNPGQRSRLWDPEEVNDVLTNNTG--TG----AIQ 539

Query: 493 ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP--------SSIGNLSRLVDLDLTNCS 544
            ++L          E+S  I+D+ L   +  ++P        S  GN  R+  + L    
Sbjct: 540 GIWL----------EMS-QIQDIKLSSKSFRKMPNLRLLAFQSLNGNFKRINSVYLPK-- 586

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
           GL+ +       K LR L  +GC  LE LP      E L  L++   + +K+   ++ L 
Sbjct: 587 GLEFLP------KKLRYLGWNGC-PLESLPSTFCP-EKLVELSMRYSNVQKLWHGVQNLP 638

Query: 605 KLSDLRLQNCKRLQSLPEL---PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSN 661
            L  + L  C  L   P L   P    +   HC SL  +  S   L +     +I N S 
Sbjct: 639 NLEKIDLFGCINLMECPNLSLAPKLKQVSISHCESLSYVDPSILSLPK----LEILNVSG 694

Query: 662 CSN 664
           C++
Sbjct: 695 CTS 697


>gi|105923139|gb|ABF81459.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1421

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 261/715 (36%), Positives = 375/715 (52%), Gaps = 126/715 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F  HL  AL +  I TF DD +L RG EIS  L  A++ SKISIV
Sbjct: 204 YDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAVQESKISIV 263

Query: 75  IFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSDA-GYCPSLGWMGIFDIPT 132
           +FS+GYASSRWCLNELV+IL+ KN K GQIV+P+FY +DPSD      S     +     
Sbjct: 264 VFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFYDIDPSDVRKQNGSFAEAFVKHEER 323

Query: 133 SESVLIE--------------GNVNDISKKLSDLFPSD------NK---------DQLVG 163
           SE  L++               N+ND++      F  +      NK         + LVG
Sbjct: 324 SEEKLVKEWRKALEEAGNLSGRNLNDMANGHEAKFIKEIIKDVLNKLDPKYLYVPEHLVG 383

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++ +   I   L + + +   VGI G+ GIGKTTIA  +++ +   FEGS F+ NI +  
Sbjct: 384 MDRLAHNIFDFLSTATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETP 443

Query: 224 EKVGGLANIHL------------NFE---------RRRLSRMKVLIVFYDLTDLKQIDLL 262
           +K+ GL  +              NFE           R+ R +VL V  D+    Q++ L
Sbjct: 444 KKLTGLVRLQTQLLRDILKQDVANFECVDRGKVLINERIRRKRVLFVADDVARQDQLNAL 503

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           +G    F PGSRVIITTRD  LL+     +    ++++EL+ + SL LFS +AF  + PA
Sbjct: 504 MGERSWFGPGSRVIITTRDSNLLR-----KADQTYQIEELTRDQSLQLFSWHAFKHSKPA 558

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             ++ELS  V+ Y  G+PLAL+V+G+ L G +   W+S ++KL+R+P+ DIQ  L++SYD
Sbjct: 559 EDYIELSKDVVDYCGGLPLALEVMGACLYGKNRGGWKSVIDKLRRIPNHDIQGKLRISYD 618

Query: 383 GLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTISN-NKIT 439
            LD EE +N FLD ACFF    +  V   L A C ++ ++ +  L G+SL+ ++   KIT
Sbjct: 619 SLDGEELRNAFLDIACFFIDRKKRYVAKVLGARCGYNPEVDLETLRGRSLIKVNAIGKIT 678

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD----SLKE 493
           MHDLL++MG E+VR+ S K+PGKR+R+W+ ED + VL +   T +  G+ LD      K 
Sbjct: 679 MHDLLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAKS 738

Query: 494 LYLGGCSNLKRFP------------------------EISC------------NIEDLDL 517
           L     + +KR                           + C            N+  LD+
Sbjct: 739 LSTRSFAKMKRLNLLQINGAHLTGSFKLLSKELMWICWLQCPLKYFSSDFTLDNLAVLDM 798

Query: 518 KETAIEELPSSIGNLSRLVDLDLTN----------------------CSGLKSVSSRLCN 555
           + + ++EL      L+RL  L+L +                      CS L  V   + N
Sbjct: 799 QYSNLKELWKGQKILNRLKILNLNHSKNLIKTPNLHSSSLEKLKLKGCSSLVEVHQSIEN 858

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
           L SL  LNL GC  L+ LPE IGN++SLE LN++     EK+P  M  +  L++L
Sbjct: 859 LTSLVFLNLEGCWNLKILPESIGNVKSLETLNISGCSQLEKLPECMGDMESLTEL 913



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)

Query: 488 LDSLKELYLGGCSNLKRFPEI-SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           L+ LK L L    NL + P + S ++E L LK  +++ E+  SI NL+ LV L+L  C  
Sbjct: 813 LNRLKILNLNHSKNLIKTPNLHSSSLEKLKLKGCSSLVEVHQSIENLTSLVFLNLEGCWN 872

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           LK +   + N+KSL  LN+SGC +LEKLPE +G++ESL  L     + E+  +S+ QL  
Sbjct: 873 LKILPESIGNVKSLETLNISGCSQLEKLPECMGDMESLTELLADGIENEQFLTSIGQLKH 932

Query: 606 LSDLRL 611
           +  L L
Sbjct: 933 VRRLSL 938



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 41/190 (21%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIE--ELPSSIGNLSRLVD 537
            LP  I N+ SL+ L + GCS L++ PE   ++E L +L    IE  +  +SIG L  +  
Sbjct: 876  LPESIGNVKSLETLNISGCSQLEKLPECMGDMESLTELLADGIENEQFLTSIGQLKHVRR 935

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIG------------------ 578
            L L   S     SS          LN +G L  ++ LP   G                  
Sbjct: 936  LSLCGYSSAPPSSS----------LNSAGVLNWKQWLPTSFGWRLVNHLELSNGGLSDRT 985

Query: 579  -------NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
                    L +LE L+L    F  +PS +  L KL  L +  C+ L S+ +LP     + 
Sbjct: 986  TNCVDFSGLSALEVLDLTRNKFSSLPSGIGFLPKLRRLFVLACEYLVSILDLPSSLDCLV 1045

Query: 631  ARHCTSLKTL 640
            A HC SLK +
Sbjct: 1046 ASHCKSLKRV 1055


>gi|359489175|ref|XP_002264704.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1254

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 279/709 (39%), Positives = 400/709 (56%), Gaps = 96/709 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
            +SS+S+ N  P   +DVFLSFRG+D R  F  HL +AL    I TF DD+ L +G  I+
Sbjct: 9   FSSSTSTSN--PQFTYDVFLSFRGEDTRSTFTDHLYSALVSNGIHTFRDDEELEKGGVIA 66

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSD--- 115
             L +AIE S+I I+IFS+ YA+S WCLNEL KI E       QI++P+FY VDPS+   
Sbjct: 67  GELLNAIEESRIFIIIFSKDYANSSWCLNELEKITECMATNDQQIILPIFYHVDPSEVRK 126

Query: 116 --AGYCPSLG----------------W---------MGIFDIP--TSESVLIEGNVNDIS 146
               Y  +                  W         +  +D      ES LI   ++DI 
Sbjct: 127 QTGTYGEAFADHEKDADQEKKEKIQKWRIALTEASNLAGYDRQKYQYESKLIMEIIDDIL 186

Query: 147 KKLSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
           KKL+      N+D + G E  +KE++S L +    +   +GI+GIGGIGKTTIA  +Y++
Sbjct: 187 KKLNPKVLYVNED-ICGKELRLKELKSLLSIELIDDVRMIGIYGIGGIGKTTIAKMVYND 245

Query: 206 ISSHFEGSYFMQNIRDESEKVGG-------------------LANIH--LNFERRRLSRM 244
           +  HF+GS F++++++ S+   G                   L+NI   +N  + RL R 
Sbjct: 246 VLCHFKGSSFLEDVKERSKCHHGRLQLLQEFLHGTLMVKDLKLSNIDEGINMIKNRLCRK 305

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           ++L++  D+  L Q+ LL+G  + F PGSR+IITTRD  LL  HR   V  V+EVKEL +
Sbjct: 306 RILLILDDVDHLDQLKLLVGSCEWFGPGSRIIITTRDKHLLNVHR---VDAVYEVKELDH 362

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
            +++ LFSR+AF QN P   + +LSN VI YA G+PLAL+VLGS+L GM+ ++W+SA++K
Sbjct: 363 KEAIQLFSRHAFKQNIPPKNYEDLSNCVINYAKGLPLALKVLGSFLYGMTIDQWKSALDK 422

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK  P+M+I  VL++S+DGLD  E+ IFLD ACFFKG D+  +   LD C F A IG+  
Sbjct: 423 LKGKPNMEIHNVLRISFDGLDHTEKQIFLDIACFFKGEDKDFISRILDGCNFFANIGLKI 482

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSL 482
           L  + L+TISN+KI MHDL+Q+MG EIVR++   DP K SRLW P+DIY+     E    
Sbjct: 483 LCDRCLITISNSKIHMHDLIQQMGQEIVREKYPDDPNKWSRLWDPDDIYRAFLRKEGMKK 542

Query: 483 PTGINLD--SLKELYLGG--CSNLKRFPEISCNIED---LDLKETAI-----EELPS--- 527
              I+LD   LKE+ L     S +K+   +     D      KE+ +      E+PS   
Sbjct: 543 IEAISLDFSRLKEIQLSTKVFSRMKKLRLLKVYWSDHSSFTKKESKVFIPKDFEIPSHEL 602

Query: 528 --------SIGNL------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
                   S+  L        LV+L+L   S +K +      L+ L+ +NLS   KL K+
Sbjct: 603 RYLYWEGYSLNCLPSNFHGENLVELELRY-STIKRLWKGSKGLEKLKFINLSHSEKLTKI 661

Query: 574 PEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +  G + +LE LNL       K+ SS+  L KL+ L+L++C++L+S P
Sbjct: 662 SKFSG-MPNLERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQKLESFP 709



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 458 KDPGKRSRLWHPEDIYQVLNENTSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD 516
           K P     + H   IY   +    LPT I  L+SL+ L L  CSN ++FPEI  +++ L 
Sbjct: 730 KFPEIHGNMRHLRKIYLNQSGIKELPTSIEFLESLEMLQLANCSNFEKFPEIQRDMKSLH 789

Query: 517 ---LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
              L  TAI+ELPSSI +L+ L +L L  C  L+ + S +C L+ L  + L GC  LE  
Sbjct: 790 WLVLGGTAIKELPSSIYHLTGLRELSLYRCKNLRRLPSSICRLEFLHGIYLHGCSNLEAF 849

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSI 629
           P+ I ++E++  L L     +++P S++ L  L +L L NC+ L +LP   C       +
Sbjct: 850 PDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEELDLTNCENLVTLPSSICNIRSLERL 909

Query: 630 HARHCTSLKTLSNSSTLLTRS 650
             ++C+ L+ L  +   L  S
Sbjct: 910 VLQNCSKLQELPKNPMTLQCS 930



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 101/192 (52%), Gaps = 41/192 (21%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLSRLVD 537
            LP+ I  L+ L  +YL GCSNL+ FP+I  ++E+   L+L  T+++ELP SI +L  L +
Sbjct: 825  LPSSICRLEFLHGIYLHGCSNLEAFPDIIKDMENIGRLELMGTSLKELPPSIEHLKGLEE 884

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE---------------------- 575
            LDLTNC  L ++ S +CN++SL RL L  C KL++LP+                      
Sbjct: 885  LDLTNCENLVTLPSSICNIRSLERLVLQNCSKLQELPKNPMTLQCSDMIGLCSLMDLNLS 944

Query: 576  -----------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                       ++  L SL  LNL+  +   IPS + QL     L+L +CK L+S+ ELP
Sbjct: 945  GCNLMGGAIPSDLWCLSSLRRLNLSGSNIRCIPSGISQLRI---LQLNHCKMLESITELP 1001

Query: 625  CGSSIHARH-CT 635
                +   H CT
Sbjct: 1002 SSLRVLDAHDCT 1013



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 4/139 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK + L     L +  + S   N+E L+L+  T++ ++ SS+G L +L  L L +C 
Sbjct: 644 LEKLKFINLSHSEKLTKISKFSGMPNLERLNLEGCTSLRKVHSSLGVLKKLTSLQLKDCQ 703

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S  S +  L+SL  L++SGC   EK PE  GN+  L  + L +   +++P+S++ L 
Sbjct: 704 KLESFPSSI-ELESLEVLDISGCSNFEKFPEIHGNMRHLRKIYLNQSGIKELPTSIEFLE 762

Query: 605 KLSDLRLQNCKRLQSLPEL 623
            L  L+L NC   +  PE+
Sbjct: 763 SLEMLQLANCSNFEKFPEI 781


>gi|105923235|gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 255/665 (38%), Positives = 366/665 (55%), Gaps = 85/665 (12%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSK 70
           P  K+DVFLSFRG+D R  F  HL  AL    I TF D D+L RG +IS  +S  I+ S+
Sbjct: 199 PQWKYDVFLSFRGEDTRKKFTDHLYTALIHAGIHTFRDNDELPRGEDISSIISRPIQESR 258

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL--- 122
           I+IV+FS+GYASS WCL EL +IL  K+  GQ+ VP+FY +DPSD     A +  +    
Sbjct: 259 IAIVVFSKGYASSTWCLGELSEILACKSAIGQLAVPIFYDIDPSDVRKQTASFAEAFKRH 318

Query: 123 -------------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDN 157
                                    GW         E+  IE  V D+  KL+  + +  
Sbjct: 319 EERFKENIEMVNKWRKVLVEAANLSGWHLQEMENGHEAKFIEKMVEDVLHKLNCKYLT-V 377

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
               VG++S +K++ S L   + +  TVGI+G+GGIGKTTIA A+++ + + FEGS  + 
Sbjct: 378 ASYPVGIDSRVKDVVSMLSVYTDDVRTVGIYGMGGIGKTTIAKAVFNELCNEFEGSCCLL 437

Query: 218 NIRDESEKVGGLANIHL---------------NFER------RRLSRMKVLIVFYDLTDL 256
           NI++ SE+  GL  +                 N +R       RL   +VL+V  DL  L
Sbjct: 438 NIKEISEQPSGLVQLQEQLISDLIQSKTFKINNVDRGSALIKERLCHKRVLVVLDDLDQL 497

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           KQ+  L+G  + F  GSRVIITTRD  LL      +V + + V+EL++++SL LF  +AF
Sbjct: 498 KQLGALMGERNWFGLGSRVIITTRDEHLLTQ---LQVHNKYLVEELNHDESLQLFIAHAF 554

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
            +N P   FL +S  V++Y  G+PLAL+VLGSYL   S  EW SA             + 
Sbjct: 555 KENRPTEEFLGISKGVVQYVGGLPLALEVLGSYLCKRSIGEWRSA-------------RK 601

Query: 377 LKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS- 434
           L++S++ LDD++ + IFLD  CFF G D   V   LD C F ++IGI  L+ +SL+T + 
Sbjct: 602 LQISFNALDDDDIKGIFLDITCFFIGMDVDYVSKLLDGCGFHSRIGIEVLMQRSLITTNW 661

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKEL 494
            NK+ MHDLL++MG EI+R+ S   PGKR RL   +D+   L +       + L+ LK L
Sbjct: 662 YNKLRMHDLLRDMGREIIREMSPDHPGKRRRLCFQKDVLDALRKK------MFLNRLKIL 715

Query: 495 YLGGCSNLKRFPE---ISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
            L    +L   P    + C +E + L+  T++ E+  SIG+L  L  L+L  C  LK++ 
Sbjct: 716 NLSYSVHLSTPPHFMGLPC-LERIILEGCTSLVEVHQSIGHLDSLTLLNLEGCKSLKNLP 774

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
             +C LK L  LN+S C+ LEKLP+++G++E+L  L       E++PSS+  L  LS+L 
Sbjct: 775 ESICYLKCLESLNISRCINLEKLPDQLGDMEALTMLLADGTAIERLPSSIGHLKNLSNLS 834

Query: 611 LQNCK 615
           L   K
Sbjct: 835 LGGFK 839


>gi|357485385|ref|XP_003612980.1| NBS resistance protein [Medicago truncatula]
 gi|355514315|gb|AES95938.1| NBS resistance protein [Medicago truncatula]
          Length = 996

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 282/800 (35%), Positives = 395/800 (49%), Gaps = 147/800 (18%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P   +DVF+SFRG+D+ H F+ HL  A  +++I  F+DDKL RGN+IS SL  AIEGS I
Sbjct: 169 PQSIYDVFVSFRGEDIHHGFLGHLFKAFSQKQINVFVDDKLKRGNDISHSLFEAIEGSFI 228

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL---GWMGIF 128
           S++IFSE YASSRWCL ELVKI+E K KYGQIV+PVFY VDP+D  +        ++ + 
Sbjct: 229 SLIIFSENYASSRWCLEELVKIIECKEKYGQIVIPVFYGVDPTDVRHQKKSYENAFVELG 288

Query: 129 DIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ------------------------LVGV 164
               S  V I  N   IS  LS +  S  ++                         L+G+
Sbjct: 289 KRYNSSEVQIWRNTLKISANLSGITSSSFRNDAELLEEIIKLVLKRLNKHPVKTKGLIGI 348

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           E  I  +E  L   S +   +GIWG+GGIGKTTIA  I++ I S +EG  F+  + +E  
Sbjct: 349 EKAIAHLEPLLHQESEKVRVIGIWGMGGIGKTTIAEEIFNQICSEYEGCCFLAKVSEELG 408

Query: 225 KVG------GLANIHL-------------NFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
           + G       L +  L             ++ +RR+  MKVLIV  D+T+  Q+++L G 
Sbjct: 409 RHGIAFLKEKLVSTLLAEDVKIDSSNGLPSYIQRRIGHMKVLIVLDDVTEEGQLEMLFGT 468

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
           LD F   SR+IITTRD Q+L  +       ++EV+ L  +++L LF+ NAF Q+H    F
Sbjct: 469 LDWFRSDSRIIITTRDKQVLIANEVVDDDALYEVRVLDSSEALALFNLNAFKQSHLENEF 528

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            ++S  V+ YA G+PL L+VL   L+G ++E WES ++KLKR+P   +  V+++S+D LD
Sbjct: 529 YDVSKRVVDYAKGIPLVLKVLAHMLRGKNKELWESQLDKLKRLPIQKVHDVMRLSFDDLD 588

Query: 386 DEEQNIFLDTACFFKGND---QYLVMNFLD-ACRFSAKIGISRLVGKSLVTIS-NNKITM 440
             EQ  FLD ACFF G     +Y+ +   D     S  IG+ RL  K+L+TIS +N I+M
Sbjct: 589 RLEQKYFLDIACFFNGMSLKVEYMKLLLKDYESDNSVAIGLERLKDKALITISKDNVISM 648

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-------------------- 480
           HD+LQEMG E+VRQES +DP K SRLW P+ IY VL  +                     
Sbjct: 649 HDILQEMGREVVRQESSEDPRKCSRLWDPDIIYDVLKNDKGTDAIRSISVDLSAIRKLKL 708

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPE-------------------------ISC-NIED 514
           S P    + +LK LY      L R P+                          S  N+  
Sbjct: 709 SPPVFDKMTNLKFLYFHDIDGLDRLPQGLQFFPTDLRYLYWMHYPLKSFPEKFSVDNLVI 768

Query: 515 LDLKETAIEELPSSIGNLSRLVDL------------DLTNCSGLKSVSSRLCN------- 555
           L L  + +E+L   + +L  L  +            D +N + LK ++ R CN       
Sbjct: 769 LGLPYSLVEKLWCGVQDLVNLKQVTLCHSKYLKELPDFSNATNLKVLNMRWCNRLIDNFC 828

Query: 556 -----------LKSLRRLNLSGCLKLEK--------------------LPEEIGNLESLE 584
                      L SL+ LNL  C  L K                    LP   G    LE
Sbjct: 829 FSLATFTRNSHLTSLKYLNLGFCKNLSKFSVTLENIVELDLSCCSIKALPSSFGCQSKLE 888

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSS 644
            L L     E IPSS+  L++   L +Q C +L ++P LP         C SLK++   S
Sbjct: 889 VLVLLGTKIESIPSSIINLTRRRVLDIQFCSKLLAVPVLPSSLETLIVECKSLKSVVFPS 948

Query: 645 TLLTRSSKHWDIFNFSNCSN 664
            +  +  ++     F NC N
Sbjct: 949 KVTEQFKENKKRIEFWNCLN 968


>gi|359495274|ref|XP_002276409.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1135

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 269/698 (38%), Positives = 379/698 (54%), Gaps = 96/698 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R+NF +HL   L  + I TFID+ KL RG  +S +L SAIE S  SI
Sbjct: 14  RYDVFLSFRGEDTRNNFTAHLCEELHTKGINTFIDEEKLERGQAVSAALVSAIENSMFSI 73

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG--------- 123
           ++ SE YASSRWCL ELVKI++     G  V+P+FY VDPSD   +    G         
Sbjct: 74  IVLSENYASSRWCLEELVKIIQCMKNSGHRVLPIFYNVDPSDVRNHMGKFGEALAKHEEN 133

Query: 124 ----------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W       T+          ES+LI+  V DI  KL     SD  + LVG
Sbjct: 134 SKEGMERVQIWKDALTQVTNFSGWDSRNKNESLLIKQIVKDILNKLLSTSSSD-IENLVG 192

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +++ I+E+++ L   S +   VGIWG+GGIGKTT+  A+YS IS  FEG  F++N+ ++ 
Sbjct: 193 IDARIQEMKTLLCLASDDVRMVGIWGMGGIGKTTLVRAVYSRISYQFEGCSFLENVAEDL 252

Query: 224 EKVGG-----------LANIHLNFE-----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
           +K G            L   +LN +     + RL   KVLIV  ++ D   ++ LIG  D
Sbjct: 253 KKKGLIGLQEKLLSHLLEEENLNMKELTSIKARLHSKKVLIVLDNVNDPTILECLIGNQD 312

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F  GS +IITTRD +LL +H+ +    +++V + + +++L   +R +         FLE
Sbjct: 313 WFGRGSTIIITTRDKRLLLSHKIN----LYKVHKFNDDEALEFLARYSLKHELLREDFLE 368

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LS +VI YA G+PLAL VLGS+L  MS+EEW   ++KLK +P+M I +VLK+SYDGLD E
Sbjct: 369 LSRVVICYAQGLPLALTVLGSFLFSMSKEEWRDQLDKLKSIPNMKIHEVLKISYDGLDFE 428

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           E+NIFLD ACF KG D+  V   LD C F +  GI  L  KSL++  +N+I MHDL+QEM
Sbjct: 429 EKNIFLDIACFLKGEDKNYVKEILDYCGFFSVSGIRALADKSLISFFHNRIMMHDLIQEM 488

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS--LPTGINLD-------------SLK 492
           G EIVRQES  +PG+RSRLW  +DI   L +NT      GI LD             +  
Sbjct: 489 GMEIVRQES-HNPGQRSRLWLHKDINDALKKNTENGKIEGIFLDLSHSQEIIDFSTQAFP 547

Query: 493 ELYLGGCSNLKRFPEISCNIED-LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSS 551
            +Y      +    +IS N  D L+ +   +   P        L  L L   S LKS+ +
Sbjct: 548 RMYKLRLLKVYESNKISRNFGDTLNKENCKVHFSPKLRFCYDELRYLYLYGYS-LKSLDN 606

Query: 552 RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK-------DFEKIPS------ 598
              N K+L  L++     + +L + I  LE L+ ++L+         DF ++P+      
Sbjct: 607 DF-NAKNLVHLSMHYS-HINRLWKGIKVLEKLKVVDLSHSKSLIETPDFSRVPNLERLVL 664

Query: 599 -----------SMKQLSKLSDLRLQNCKRLQSLPELPC 625
                      S+  L+KL+ L L+NC++L+SLP   C
Sbjct: 665 EGCISLHKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMC 702



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK + L    +L   P+ S   N+E L L+   ++ ++  S+G L++L  L L NC 
Sbjct: 633 LEKLKVVDLSHSKSLIETPDFSRVPNLERLVLEGCISLHKVHPSLGVLNKLNFLSLKNCE 692

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS+ S +C+LKSL    LSGC +LE  PE  GNLE L+ L+        +PSS   L 
Sbjct: 693 KLKSLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSFSLLR 752

Query: 605 KLSDLRLQNCK 615
            L  L  + C+
Sbjct: 753 NLEILSFKGCR 763



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 88/183 (48%), Gaps = 22/183 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+ + +L SL+   L GCS L+ FPE   N+E   +L      +  LPSS   L  L 
Sbjct: 696 SLPSSMCDLKSLETFILSGCSRLEDFPENFGNLEMLKELHADGIPVRVLPSSFSLLRNLE 755

Query: 537 DLDLTNCSGLKSVS---------------SRLCNLKSLRRLNLSGC-LKLEKLPEEIGNL 580
            L    C G  S S                 L  L SL RLNL  C L  E     +  L
Sbjct: 756 ILSFKGCRGPPSTSWLLPRRSSSSTGSILHHLSGLYSLTRLNLGYCNLSDETNLSSLCLL 815

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
            SLE L L+  +F  +P+ ++ LS L  L L+ CKRLQ LPELP    S+ A+ C SL+ 
Sbjct: 816 SSLEVLGLSGNNFVTLPN-IRGLSSLEGLLLEKCKRLQILPELPSSIYSLIAQDCISLEN 874

Query: 640 LSN 642
            SN
Sbjct: 875 ASN 877



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 18/183 (9%)

Query: 489 DSLKELYLGGCSNLKRFPEI--SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           D L+ LYL G S LK       + N+  L +  + I  L   I  L +L  +DL++   L
Sbjct: 589 DELRYLYLYGYS-LKSLDNDFNAKNLVHLSMHYSHINRLWKGIKVLEKLKVVDLSHSKSL 647

Query: 547 KSVS--SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
                 SR+ NL+   RL L GC+ L K+   +G L  L +L+L   +  + +PSSM  L
Sbjct: 648 IETPDFSRVPNLE---RLVLEGCISLHKVHPSLGVLNKLNFLSLKNCEKLKSLPSSMCDL 704

Query: 604 SKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
             L    L  C RL+  PE    L     +HA     ++ L +S +LL    ++ +I +F
Sbjct: 705 KSLETFILSGCSRLEDFPENFGNLEMLKELHA-DGIPVRVLPSSFSLL----RNLEILSF 759

Query: 660 SNC 662
             C
Sbjct: 760 KGC 762


>gi|359493574|ref|XP_002271071.2| PREDICTED: TMV resistance protein N [Vitis vinifera]
          Length = 813

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 244/638 (38%), Positives = 355/638 (55%), Gaps = 80/638 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R +F  HL +AL R  I TF DD+ L RG EI+P L  AIE S+I+I+
Sbjct: 21  YDVFLSFRGEDTRKSFTDHLYSALIRNNIHTFRDDEELPRGEEIAPELLKAIEESRIAII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----AGYCPSL-------- 122
           +FS+ YA S+WCL+ELVKI+E K + GQIV+P+FY VDPS+     G C           
Sbjct: 81  VFSKTYAHSKWCLDELVKIMECKEERGQIVIPIFYNVDPSEVRKQTGICGEAFTRHEENA 140

Query: 123 ---------GWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W    +   +          ES LI+  + ++   L  +   +  + +VG
Sbjct: 141 DEERKEKIRKWRTAMEQAGNLAGHVAENRYESTLIDEIIENVHGNLPKILGVN--ENIVG 198

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++S ++++ S L   S +   VG++G+GGIGKTTI +A+Y+ IS  FE    + N+R ES
Sbjct: 199 MDSRLEKLISLLKIESNDVRMVGVYGLGGIGKTTIINALYNQISHQFESVSLLTNVRKES 258

Query: 224 EKVGG--------------------LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            K  G                    L N++  +   R +LS  KVL+   D+ +L Q++ 
Sbjct: 259 TKNSGLLKLQQKLLDDTLRTKGQIVLKNVYEGIKIIRDKLSSKKVLVFLDDVDELTQLEH 318

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           LIG+ + F PGSR+IITTR   LL  H    V  ++EVK+L+++++L LF R AF Q+H 
Sbjct: 319 LIGKHNWFGPGSRIIITTRKKDLLTRHE---VNDIYEVKKLNFHEALQLFCRYAFKQHHL 375

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             G+ +LS+ V++YA+G+PLAL+VLGS L G     W+S + KL+++P+M+I  VLK+S+
Sbjct: 376 KEGYADLSHQVVRYADGLPLALKVLGSLLFGKRLPNWKSELRKLEKVPNMEIVNVLKISF 435

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITM 440
           DGLD  ++ IFLD ACFFKG D  +V   LD   F+A+ GI+ LV +  +TIS +K I M
Sbjct: 436 DGLDYTQRMIFLDIACFFKGGDVEIVSRILDGSEFNAESGINALVDRCFITISKDKTIEM 495

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLK-ELYLG 497
           HDLL +MG  IV +E   +PG+RSRLW   DIY+VL  NT      GI LD  K E    
Sbjct: 496 HDLLAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFLDVDKSEQIQF 555

Query: 498 GCSNLKRFPEISCNI---EDLDLKETAIEELPS----SIGNLSRLVDLDLT--------N 542
            C   +R   +   +     + L E  I   P     S G+  +   L +          
Sbjct: 556 TCKAFERMNRLRLLVVSHNRIQLPEDFIARGPGENAMSRGSFFKFAQLSIAFFVRKVREK 615

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIG 578
           C GL ++ ++   L+ L+   +   L  E++P   EIG
Sbjct: 616 CGGLLAIDTQTERLEELQWARILVKLSGEEIPSMIEIG 653


>gi|359493343|ref|XP_002277693.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1140

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 271/756 (35%), Positives = 383/756 (50%), Gaps = 127/756 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           + DVFLSFRG+D R+ F  HL  AL  + IETF+D +L RG  I+P+L +AIEGS+ SI+
Sbjct: 64  QFDVFLSFRGEDTRYTFTDHLYKALRAKGIETFMDYQLRRGELITPALVTAIEGSRHSII 123

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG----------------- 117
           + SE YASS+WCL+ELVKIL+S+N   +  VP+FY V+PSD G                 
Sbjct: 124 VLSENYASSKWCLDELVKILQSQNTKERRAVPIFYNVNPSDVGNQRGSFGKALADHEEKL 183

Query: 118 -----------------YCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPS 155
                            +  +L  +G     TS     E+  IE  V DISK L+ +  S
Sbjct: 184 KADHEKKLKYDMERVQRWRKALTQVGKISGFTSSRDKPETQFIEEIVTDISKDLNCVSSS 243

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
           D K+ LVG+   I+E+ES L   ST+   VGIWG+GGIGKTT+A  IY  +   FEG  F
Sbjct: 244 DAKN-LVGMNCCIREMESLLCLESTKVLMVGIWGMGGIGKTTLARVIYERVLCQFEGYCF 302

Query: 216 MQNIRDES---------EKVGGLANIHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           +  ++  S          KV G  NI++     + RL   KVL+V  D+     ++ L+G
Sbjct: 303 LAGLKSTSMDNLKAELLSKVLGDKNINMGLTSIKARLHSKKVLVVIDDVNHQSMLETLVG 362

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F P SRVIITTRD  LL       V  V+EV++L  ++++ LFS  AF    P   
Sbjct: 363 GHDWFGPQSRVIITTRDKHLLTVQG---VDAVYEVQKLEDDNAIQLFSYYAFKNKPPTRD 419

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
            ++L + +  YA G+PLAL+VLG  L   + + W   +N+LK++ + +IQ+VL++S+DGL
Sbjct: 420 VMKLLDQITSYAQGLPLALKVLGCSLCDRNADYWTDKLNQLKKISNGEIQEVLQISFDGL 479

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDL 443
           +D E+ IFLD ACFF+G  Q  V   L++C FS   GI  L+ KSL+TI+ ++++ MHDL
Sbjct: 480 EDNEKEIFLDIACFFRGRGQTFVKKILESCGFSMVSGIENLIDKSLITITQDDRLEMHDL 539

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGI--NLDSLKEL----- 494
           LQE+G +I+R+ S K+PG+RSRLW  +D+  +L   T      GI  +L  L+E+     
Sbjct: 540 LQEVGWQIIRKTSPKEPGRRSRLWEQKDVSHILKRETGAQEVEGIFFDLSGLEEMNFTTK 599

Query: 495 YLGGCSNLKRFPEISCNIED------------------------LDLKETAIEELP---- 526
                +NL+       N+ D                        L   E   E LP    
Sbjct: 600 AFSQMTNLRLLEIYRSNLRDTGGKMQCKLHVSDDFKFHYDELRYLHWDEYPCESLPFDFE 659

Query: 527 ----------------------SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
                                    GNL   VD+  +         SR  NL+ L    L
Sbjct: 660 SENLVHFCMPRSRHLTQLWKGQKVFGNL-EFVDVSYSQYLKETPDFSRATNLEVLV---L 715

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            GC  L K+   +G L  L  LNL    + E +P S++ L  L  L L  C +L+ LPE+
Sbjct: 716 KGCTNLRKVHPSLGYLSKLILLNLENCTNLEHLP-SIRWLVSLETLILSGCSKLEKLPEV 774

Query: 624 PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
           P       +H   L  L    T +T  S   ++ NF
Sbjct: 775 P-------QHMPYLSKLCLDGTAITDFSGWSELGNF 803



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 93/194 (47%), Gaps = 20/194 (10%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELP--SSIGNLSRLV 536
           LP+   L SL+ L L GCS L++ PE+  ++  L    L  TAI +    S +GN     
Sbjct: 748 LPSIRWLVSLETLILSGCSKLEKLPEVPQHMPYLSKLCLDGTAITDFSGWSELGNFQENS 807

Query: 537 -DLDLTNCSGLKSVSSRLCNLKS----LRRLNLS--GCLKLEKLPEEIGNLESLEYLNLA 589
            +LD  N   L S  S +  L S    LR  N S     +          L SL YLNL+
Sbjct: 808 GNLDCLN--ELNSDDSTIRQLPSSSVVLRNHNASPSSAPRRSHSIRPHCTLTSLTYLNLS 865

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLT 648
                ++P ++++L  L  L L NC+RLQ+LP LP     ++A +CTSL+ +S  S    
Sbjct: 866 GTSIIRLPWNLERLFMLQRLELTNCRRLQALPVLPSSIERMNASNCTSLELVSPQSVF-- 923

Query: 649 RSSKHWDIFNFSNC 662
              K +  F F NC
Sbjct: 924 ---KRFGGFLFGNC 934


>gi|255556649|ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223541425|gb|EEF42975.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 282/810 (34%), Positives = 397/810 (49%), Gaps = 186/810 (22%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D R NF  HL  AL +  I TF DD ++ RG  I   + +AI  SKIS++
Sbjct: 22  YHVFLSFRGGDTRKNFTDHLYTALIQAGIHTFRDDDEIKRGENIESEIKNAIRESKISVL 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSL------- 122
           + S+ YASSRWCL+EL  I+E +   G IVVPVFY  DP++ G     Y  +        
Sbjct: 82  VLSKDYASSRWCLDELAMIMERRRTDGHIVVPVFYDADPTEVGKQIGSYGEAFERHEKVF 141

Query: 123 --------GWM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                   GW           G+      +S  I+  V ++  KL+ +   +    LVG+
Sbjct: 142 KEEMEMVEGWRAALREVADMGGMVLENRHQSQFIQNIVKEVGNKLNRVV-LNVASYLVGI 200

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S I +I S L   S +     I+G+GGIGKTT+A  I++     F+G+ F+ N+R+ SE
Sbjct: 201 DSRIADINSWLQDDSKDVGIATIYGVGGIGKTTLAKIIFNQNFDKFDGASFLANVRETSE 260

Query: 225 KVGGLANIHLNFERRRLS-------------------------RMKVLIVFYDLTDLKQI 259
           +  GL  +    +R+ LS                         R +VL++  DL  L Q 
Sbjct: 261 QSNGLVRL----QRKVLSDLLKGKTSKIYNVDEGIIKIKDAICRRRVLLILDDLDQLDQF 316

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + +IG  + F PGS++I TTR  +LL+ H    V  +F V EL  N+SL LFS ++FGQ+
Sbjct: 317 NSIIGMQEWFFPGSKIIATTRHERLLRAH---EVSKLFRVNELDSNESLQLFSWHSFGQD 373

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           HP   F + S   +   +G+PLALQVLGS L G S E WESA+ KL+ +P   IQK+L+V
Sbjct: 374 HPVEVFEQQSKRAVDLCSGLPLALQVLGSSLSGKSIEVWESALQKLEAVPDSKIQKILRV 433

Query: 380 SYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNK 437
           SYD L DD ++N+FLD ACFF G ++  V++ L  C+F A +GI+ L+G+ L+TI+  NK
Sbjct: 434 SYDSLEDDHDKNLFLDIACFFTGMEKNYVISILQGCKFYAVVGINNLIGRCLLTINEGNK 493

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD------ 489
           + +H LL++MG EIVRQES +DPGKRSR+W  +D + +L ENT   T  G+ LD      
Sbjct: 494 LIIHQLLRDMGREIVRQESPEDPGKRSRVWRDKDAFNLLRENTGTETVKGLTLDLQMLKE 553

Query: 490 --------------SLKELYL------GGCSNLKR---------FPEISCNIEDLDLKET 520
                          LK L L      G C +  +         FP + C   +  L + 
Sbjct: 554 ANTDLKTKAFGEMNKLKLLRLNCVKLSGDCEDFPKGLVWLFWRGFP-LRCIPNNFHLDKL 612

Query: 521 AIEELPSS----------------IGNLSR---------------LVDLDLTNCSGLKSV 549
           A+ ++  S                I NLS                L  L L +C  L  +
Sbjct: 613 AVLDMRKSSLINVWKGTRLLVALKILNLSHSHCLVKTPNFMGLPSLERLKLKDCVNLIDL 672

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL--------------------- 588
              +  L+ L  L+L GC  +++LP EIG LESLE LNL                     
Sbjct: 673 DESIGYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGCSKLDQLPEEMRKMQSLKV 732

Query: 589 --AEKD---------------------------FEKIPSSMKQLSKLSDLRLQNCKRLQS 619
             A+ D                              IP S+  L+ L  L L  C RLQS
Sbjct: 733 LYADADCNLSDVAIPNDLRCLRSLESLDLKGNPIYSIPESINSLTTLQYLCLDKCTRLQS 792

Query: 620 LPELPCG-SSIHARHCTSLKTLSNSSTLLT 648
           LP+LP     + A  CTSL+ ++N   LL+
Sbjct: 793 LPQLPTSLEELKAEGCTSLERITNLPNLLS 822


>gi|359493273|ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 275/717 (38%), Positives = 373/717 (52%), Gaps = 114/717 (15%)

Query: 13  HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKI 71
           H  +DVFLSFRG+D R +F  HL AAL  + + TF DD+ L RG EI+P L  AIE S+I
Sbjct: 14  HWNYDVFLSFRGEDTRRSFTDHLYAALVEKGVRTFRDDEELERGKEIAPELLKAIEESRI 73

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---------------- 115
           S+V+FS+ YA S WC++ELVKI+E     GQ V+PVFY VDP+                 
Sbjct: 74  SVVVFSKNYARSGWCMDELVKIIECMKAKGQTVLPVFYDVDPTHVRKQTGSFMEAFASHG 133

Query: 116 -------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                        A    +    G       ES LI+  + +I  KLS      +K  LV
Sbjct: 134 EDTEVIERAKRWRAALTQAANLSGWHLQNGYESKLIKKIIEEILSKLSRKLLYVDK-HLV 192

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQNI 219
           GV S +KEI   LL  S E N V + GI GIG   KTTIA  +Y+ ISS FEG  F+ NI
Sbjct: 193 GVSSRLKEI---LLRVSIESNDVRMVGICGIGGVGKTTIAKVVYNLISSQFEGISFLANI 249

Query: 220 RDESEKVGGL-------ANIHLNFERR-------------RLSRMKVLIVFYDLTDLKQI 259
           R+ S+  G L        +I + + +R             RL   KVLI+  D+ DL Q+
Sbjct: 250 REVSKNCGLLPLQKQLLGDILMGWSQRISNLDEGINVLMDRLHSKKVLIILDDVDDLNQL 309

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G +D F  GSR++ITTRD  LL  H    V  ++E KEL   ++L LFS+ AF + 
Sbjct: 310 ESLAGNVDWFGIGSRIVITTRDKHLLNVHG---VSEIYEAKELEPEEALQLFSQYAFKRK 366

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P   ++ LS+ V+ YA G+PLAL+VLGS+L   +  EWES ++KLK+  +  +Q VL++
Sbjct: 367 SPDKDYMNLSDNVVHYAKGLPLALKVLGSFLFSKTILEWESELHKLKKELNTKVQDVLRI 426

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           S+DGLD  ++ IFLD ACFFKG +   V+  LD C F AK GI  L  + L+ + +N++ 
Sbjct: 427 SFDGLDFTQKEIFLDLACFFKGQEYDFVIKILDGCGFHAKSGIRVLSDRCLIDLLDNRLW 486

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSL------ 491
           MHDL+Q+MG EIVRQE  KDPGK SRLW  E IY VL +NT   T  GI LD        
Sbjct: 487 MHDLIQQMGWEIVRQECPKDPGKWSRLWDYEHIYSVLKKNTGTETIEGIFLDMYRSKEIQ 546

Query: 492 ------------------------KELYLGGCSNLKRFPEI------------------- 508
                                   KE Y    S    FP                     
Sbjct: 547 FTTEAFAKMNRLRLLKVFNFSGIGKEGYKEPLSVSFEFPSYELRYLYWHGYPFGSLPSKF 606

Query: 509 -SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            S N+ +L++  + + EL      L  L  ++L+N   L  + +   ++ +L RL L GC
Sbjct: 607 HSENLIELNMCYSYMRELWKGNEVLDNLNTIELSNSQHLIHLPN-FSSMPNLERLVLEGC 665

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             + +LP  IG L  L  L+L   K  + +PSS+ +L  L  L L  C +L+S PE+
Sbjct: 666 TTISELPFSIGYLTGLILLDLENCKRLKSLPSSICKLKSLETLILSACSKLESFPEI 722



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 107/215 (49%), Gaps = 31/215 (14%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
            +LP  I NL SL+ L + GCS L++ PE    + C ++ L    T + + PSSI  L  
Sbjct: 764 ATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVK-LQADGTLVRQPPSSIVLLRN 822

Query: 535 LVDLDLTNCSGLKSVS----------------------SRLCNLKSLRRLNLSGCLKLE- 571
           L  L    C GL S S                        L  L SLR L++S C  +E 
Sbjct: 823 LEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSGLCSLRELDISDCNLMEG 882

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            +P +I NL SLE LNL+  +F  +P+ + +LSKL  L L +CK L  +PELP     ++
Sbjct: 883 AVPFDICNLSSLETLNLSRNNFFSLPAGISKLSKLRFLSLNHCKSLLQIPELPSSIIEVN 942

Query: 631 ARHCTSLKT-LSNSSTLLTRSSKHWDIFNFSNCSN 664
           A++C+SL T L+ SS    +    W +F   NC N
Sbjct: 943 AQYCSSLNTILTPSSVCNNQPVCRWLVFTLPNCFN 977



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 3/137 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           LD+L  + L    +L   P  S   N+E L L+  T I ELP SIG L+ L+ LDL NC 
Sbjct: 631 LDNLNTIELSNSQHLIHLPNFSSMPNLERLVLEGCTTISELPFSIGYLTGLILLDLENCK 690

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS+ S +C LKSL  L LS C KLE  PE + N+E L+ L L     +++  S++ L+
Sbjct: 691 RLKSLPSSICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLN 750

Query: 605 KLSDLRLQNCKRLQSLP 621
            L  L L++CK L +LP
Sbjct: 751 GLVSLNLRDCKNLATLP 767



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 4/143 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SL+ L L  CS L+ FPEI  N+E L    L  TA+++L  SI +L+ LV
Sbjct: 694 SLPSSICKLKSLETLILSACSKLESFPEIMENMEHLKKLLLDGTALKQLHPSIEHLNGLV 753

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L +C  L ++   + NLKSL  L +SGC KL++LPE +G+L+ L  L        + 
Sbjct: 754 SLNLRDCKNLATLPCSIGNLKSLETLIVSGCSKLQQLPENLGSLQCLVKLQADGTLVRQP 813

Query: 597 PSSMKQLSKLSDLRLQNCKRLQS 619
           PSS+  L  L  L    CK L S
Sbjct: 814 PSSIVLLRNLEILSFGGCKGLAS 836


>gi|357513945|ref|XP_003627261.1| Resistance protein [Medicago truncatula]
 gi|355521283|gb|AET01737.1| Resistance protein [Medicago truncatula]
          Length = 961

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 252/701 (35%), Positives = 376/701 (53%), Gaps = 102/701 (14%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P   HDVFL+FRG+D R + VSH++AAL    I T+ID +L++G E+ P L  AIEGS I
Sbjct: 9   PQWIHDVFLNFRGEDTRTSLVSHMDAALTNAGINTYIDQQLHKGTELGPELLRAIEGSHI 68

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLGWM- 125
           SI++FS+ Y  S WCLNEL K++E    +GQ+VVP+FY VDPS        +   L +M 
Sbjct: 69  SILVFSKRYTESSWCLNELKKVMECHRTHGQVVVPIFYDVDPSVVRQQKGAFGEILKYML 128

Query: 126 -------------GIFDIPT--SESVLIEGNVNDISKKLSDL------FPSDNKDQLVGV 164
                          +D+    SE+ L++  V D+  KL +       FP       VG+
Sbjct: 129 SRWTSALTQAANLSGWDVTNCRSEAELVQQIVEDLLAKLDNASLSIIEFP-------VGL 181

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ES + ++   + +  ++   +GIWG+G  GKTT A AIY+ I   F    F++N+R+  E
Sbjct: 182 ESRMHKVIEFIATQPSKVCMIGIWGMGRSGKTTTAKAIYNQIHRKFLNRSFIENVREVCE 241

Query: 225 KVGGLANIHLNFE----------------------RRRLSRMKVLIVFYDLTDLKQIDLL 262
           K      IHL  +                       +R    K+L+V  D+T ++Q+  L
Sbjct: 242 K-ENRGTIHLQQQLLSDILNTKNKIHSPALGTTKIEKRFQGKKLLVVLDDVTTVEQLKAL 300

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G    F PGS  I+TTRD +LL      +V +V  +KE+   D L LFS +AF Q  P 
Sbjct: 301 CGNPRLFGPGSVFIVTTRDARLLN---LVKVDYVCTMKEMEEKDPLELFSWHAFRQPSPI 357

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             F ELS  V+ Y  G+PLAL+V+GSYL G +++EWES + KL+R+P+  +Q+ L++SYD
Sbjct: 358 KNFSELSRTVVAYCGGLPLALEVIGSYLYGRTKQEWESVLLKLERIPNDQVQEKLRISYD 417

Query: 383 GL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITM 440
           GL DD  ++IFLD  CFF G D+  V   L+ C   A IGI+ LV +SLV I  NNK+ M
Sbjct: 418 GLKDDMAKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGITVLVERSLVKIEKNNKLGM 477

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELY----- 495
           HDLL++MG EIVRQ S K+PGKRSRLW  ED++ VL +NT        DS  E+      
Sbjct: 478 HDLLRDMGREIVRQSSAKNPGKRSRLWFHEDVHDVLTKNTVF--RFCTDSFMEMKQLKQL 535

Query: 496 -------------LGGCSNLKRFPEI-----SC--------NIEDLDLKETAIEELPSSI 529
                         G  S   R+  +     +C        N+  LDLK + I+++ +  
Sbjct: 536 KLLQLDCVDLAGDYGCISKQLRWVSVQGFTLNCIPDDFYQENLVALDLKHSKIKQVWNET 595

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
             L +L  L+L++   LK  +     L +L +L +  C  L ++ + IG+L+++  +NL 
Sbjct: 596 MFLEKLKILNLSHSRYLKH-TPDFSKLPNLEKLIMKDCPSLSEVHQSIGDLKNVLLINLK 654

Query: 590 E-KDFEKIPSSMKQLSKLSDLRLQNCKRL----QSLPELPC 625
           +      +P ++ QL +   +++++   L     ++ E+PC
Sbjct: 655 DCTSLSNLPRNIYQLEE-DIMQMKSLTTLIANDTAVKEVPC 694


>gi|359493208|ref|XP_002269054.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1695

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 272/773 (35%), Positives = 382/773 (49%), Gaps = 165/773 (21%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MAS S+S +      +DVFLSFRG+D R++F  HL +AL    + TF DD+ L RG+ I+
Sbjct: 1   MASPSTSSH---EGIYDVFLSFRGEDTRYHFTDHLYSALRDNGVHTFRDDEELERGDVIA 57

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC 119
           P L  AIE S+ISIV+FSE YA SRWCL+ELVKI+E   +  QIV+PVFY VDPS     
Sbjct: 58  PGLLKAIEQSRISIVVFSEKYAQSRWCLDELVKIIECMTERKQIVLPVFYHVDPSHVR-- 115

Query: 120 PSLGWMG--------IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI 171
             +G  G          D+   E +         +  LS     DN+ +     ++IKEI
Sbjct: 116 KQMGSYGEAFADHEKDADLKKREKIQKWRTALTETSNLSGWHLRDNQSE----SNVIKEI 171

Query: 172 ESQLLS-----------------------------GSTEFNTVGIWGIGGIGKTTIASAI 202
             ++++                              S +   VGI G+GGIGKTTIA A+
Sbjct: 172 TDKIITRLNPRSLYVGKNIVGMNIRLEKLISLINIDSNDVCFVGICGLGGIGKTTIAKAL 231

Query: 203 YSNISSHFEGSYFMQNIRDESEKVGGL-------------------ANIHLNFE--RRRL 241
           Y+ IS+ F+G+ F+ N+R+ SEK   +                   +N+H   +  ++ L
Sbjct: 232 YNKISNQFQGASFLANVRENSEKHSDILQLQRQLLDDIDKGKNRKISNVHEGMDAIKKVL 291

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
           S  +VL+V  D+ + +Q++   G  D F PGSR++ITTR+  LL       V    E++E
Sbjct: 292 SLRRVLVVLDDVDNFEQLNHFAGEHDWFGPGSRILITTRNKHLL------HVDKYHEIEE 345

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
           L+  ++L LFS  AF        + +L + ++KYA G+PLALQVLGS+L   +  EWES 
Sbjct: 346 LNSEEALQLFSLYAFKPTCHQEDYEDLQDRIVKYAKGLPLALQVLGSHLCERTPSEWESE 405

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
           ++KL+R P  +IQ VLK+SYDGLD  +  IFLD ACFFKG D+  V   LD C F A+ G
Sbjct: 406 LHKLEREPIQEIQNVLKISYDGLDRTQGEIFLDIACFFKGQDKDFVSRILDGCDFYAESG 465

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NEN 479
            S L  K L+TI +NKI MHDL+Q+MG  IVR+++ + PGK SRLW  ED+++VL  NE 
Sbjct: 466 FSVLCDKCLITILDNKIYMHDLIQQMGWHIVREQNPEKPGKWSRLWEREDVFRVLTRNEG 525

Query: 480 TSLPTGINLD-----------------------------------------SLKELYLGG 498
           T    GI LD                                          L E++L  
Sbjct: 526 TEAIKGIFLDMSTSKQLQFTTEAFKVMNDLRLLKVHQDANYDSAVKYWTLAGLFEMHLSQ 585

Query: 499 CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSS------- 551
               + F   S  +  L      +E LPS+      LV+L+L  CS +K +         
Sbjct: 586 VHFCRDFEFPSQELRYLHWDGYPLESLPSNF-YAENLVELNL-RCSNIKQLWETELFKKL 643

Query: 552 RLCNLKSLRRLN---------------LSGCLKLEKLPEEI------------------- 577
           ++ NL   + LN               L GC+ LE LP  I                   
Sbjct: 644 KVINLSHSKHLNKIPNPSCVPNLEILTLEGCINLESLPRSIYKLRRLKTLCCGGCKNLRS 703

Query: 578 -----GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
                G++E L  L+L      K+PSS++ L  L  L L NCK L ++P+  C
Sbjct: 704 FPEIMGDMEKLRKLDLDNTAIVKLPSSIEHLKGLEYLDLSNCKDLITVPQSIC 756



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 94/194 (48%), Gaps = 50/194 (25%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           SLP  I  L  LK L  GGC NL+ FPEI  ++E L   DL  TAI +LPSSI +L  L 
Sbjct: 679 SLPRSIYKLRRLKTLCCGGCKNLRSFPEIMGDMEKLRKLDLDNTAIVKLPSSIEHLKGLE 738

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--------------------- 575
            LDL+NC  L +V   +CNL SL+ LN   C KLEKLPE                     
Sbjct: 739 YLDLSNCKDLITVPQSICNLTSLKFLNFDFCSKLEKLPEDLKSLKCLQKLYLQDLNCQLP 798

Query: 576 -------------------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
                                    E+  L SL+ L+L+   F  IP+S+ QLSKL  L 
Sbjct: 799 SVSGLCSLKVLNLSECNLMDGEIPSEVCQLSSLKELDLSWNHFSSIPASISQLSKLKALG 858

Query: 611 LQNCKRLQSLPELP 624
           L +C+ L  +PELP
Sbjct: 859 LSHCRNLLQIPELP 872



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 4/111 (3%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLV 536
            SLP  I  L  L+ L    CS L  FPE+     N+ +L L  TAI++LPSSI NL  L 
Sbjct: 1172 SLPRSICRLKYLQVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSSIENLKGLE 1231

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
             LDL +C  L ++ + +CNLKSL+ L++ GC KL KLP+ +G+L+ LE+L+
Sbjct: 1232 FLDLASCKKLVTLPTHICNLKSLKTLHVYGCSKLNKLPKSLGSLQCLEHLD 1282



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 25/168 (14%)

Query: 480  TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            T++P   N++ L++LYL G                     TAI+E+PSSI +LS LV+  
Sbjct: 1125 TTMPDTWNMECLQKLYLDG---------------------TAIKEIPSSIDSLSILVEFY 1163

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
              NC  L+S+   +C LK L+ L  + C KL   PE + N+ +L  L+L     + +PSS
Sbjct: 1164 TRNCKNLESLPRSICRLKYLQVLCCTNCSKLGSFPEVMENMNNLRELHLHGTAIQDLPSS 1223

Query: 600  MKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTLSNS 643
            ++ L  L  L L +CK+L +LP   C      ++H   C+ L  L  S
Sbjct: 1224 IENLKGLEFLDLASCKKLVTLPTHICNLKSLKTLHVYGCSKLNKLPKS 1271


>gi|82542039|gb|ABB82027.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1120

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 272/769 (35%), Positives = 401/769 (52%), Gaps = 146/769 (18%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLS 63
           S S   IP   +DVFLSFRG++ R  F  HL AAL +  I TF DD +L RG EIS  L 
Sbjct: 4   SESSRSIPEGAYDVFLSFRGEETRKTFTGHLYAALDQAGIHTFRDDDELPRGEEISEHLL 63

Query: 64  SAIEGSKISIVIFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPSD-----AG 117
            AI  SKISIV+FS+GYASSRWCLNELV+IL+ K  K GQIV+P+FY +DPSD       
Sbjct: 64  EAIRESKISIVVFSKGYASSRWCLNELVEILKCKRKKTGQIVLPIFYDIDPSDVRKQTGS 123

Query: 118 YCPSL---------------------------GWMGIFDIPTS-ESVLIEGNVNDISKKL 149
           +  +                            GW  + D+    E+  I+G + D+  KL
Sbjct: 124 FAEAFDKHEEERFEEKLVKEWRKALEDAGNLSGW-SLNDMANGHEAKFIKGIIKDVLNKL 182

Query: 150 SD--LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
               L+  ++   LVG++ +  +I   L + + +   VGI G+ GIGKTTIA  +++ + 
Sbjct: 183 RRECLYVPEH---LVGMD-LAHDIYDFLSNATDDVRIVGIHGMPGIGKTTIAKVVFNQLC 238

Query: 208 SHFEGSYFMQNIRDESEKVGGLANIH------------LNFE---------RRRLSRMKV 246
           + F+GS F+ +I + S++V GLA +              NF+         + RL R +V
Sbjct: 239 NGFDGSCFLSDINERSKQVNGLALLQKRLLHDILKQDAANFDCVDRGKVLIKERLCRKRV 298

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L+V  D+    Q+  L+G    F PGSRVIITTR+  LL+     +    ++++EL+ + 
Sbjct: 299 LVVADDVAHQDQLKALMGDRSWFGPGSRVIITTRNSNLLR-----KADRTYQIEELTRDQ 353

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           SL LFS +AF    PA  ++ELS   + Y  G+PLAL V+G+ L G + + W+S ++KLK
Sbjct: 354 SLQLFSWHAFEDTKPAEDYIELSKKAVDYCGGLPLALDVMGACLSGKNRDGWKSVIDKLK 413

Query: 367 RMPHMDIQKVLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISR 424
           R+P+ DIQ+ L++SYD LD EE +N FLD ACFF    +  +   L A C ++ ++ +  
Sbjct: 414 RIPNHDIQRKLRISYDLLDGEELKNAFLDIACFFIDRKKEYIAKLLGARCGYNPEVDLQT 473

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL-------- 476
           L  +SL+ +    +TMHDLL++MG E+VR+   K+PGKR+R+W+ ED + VL        
Sbjct: 474 LHERSLIKVLGETVTMHDLLRDMGREVVRESPPKEPGKRTRIWNQEDAWNVLQQQKGTEV 533

Query: 477 ----------NENTSLPT-------GINLDSLKELYLGG------------CSN---LKR 504
                     +E  SL T       G+NL  +   +L G            C +   LK 
Sbjct: 534 VEGLKLDVRASETKSLSTGSFAKMKGLNLLQINGAHLTGSFKLLSKELMWICWHEFPLKY 593

Query: 505 FPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN-------------------- 542
           FP      N+  LD++ + ++EL      L +L  L+L++                    
Sbjct: 594 FPSDFTLDNLAVLDMQYSNLKELWKGKKILDKLKILNLSHSQHLIKTPDLHSSSLEKLIL 653

Query: 543 --CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSS 599
             CS L  V   + NL SL  LNL GC  L+ LPE I N++SLE LN++     EK+P  
Sbjct: 654 EGCSSLVEVHQSIENLTSLVFLNLKGCWSLKTLPESIDNVKSLETLNISGCSQVEKLPER 713

Query: 600 MKQLSKLSDL---RLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSST 645
           M  +  L++L    ++N + L S+ +L        +HC  L    +SST
Sbjct: 714 MGDMEFLTELLADGIENEQFLSSIGQL--------KHCRRLSLCGDSST 754



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 22/182 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIE--ELPSSIGNLSRLV 536
           +LP  I N+ SL+ L + GCS +++ PE   ++E L +L    IE  +  SSIG L    
Sbjct: 685 TLPESIDNVKSLETLNISGCSQVEKLPERMGDMEFLTELLADGIENEQFLSSIGQLKHCR 744

Query: 537 DLDLTNCSGLKS----VSSRLCNLK-----------SLRRLNLSGCLKLEKLPE--EIGN 579
            L L   S        +S+ + N K           S++ L LS     ++     +   
Sbjct: 745 RLSLCGDSSTPPSSSLISTGVLNWKRWLPASFIEWISVKHLELSNSGLSDRATNCVDFSG 804

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
           L +LE L L    F  +PS +  LS+L +L ++ CK L S+P+LP     + A  C SLK
Sbjct: 805 LSALEKLTLDGNKFSSLPSGIGFLSELRELSVKGCKYLVSIPDLPSSLKRLGACDCKSLK 864

Query: 639 TL 640
            +
Sbjct: 865 RV 866


>gi|356495059|ref|XP_003516398.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1131

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 269/730 (36%), Positives = 391/730 (53%), Gaps = 113/730 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           +AS     + +P  K+DVF++FRG+D+RH+F+ +L  A  +++I  F+DDKL +G+EI P
Sbjct: 3   VASEQMPADSVPQIKYDVFVNFRGEDIRHSFLGYLTEAFYQKQINAFVDDKLEKGDEIWP 62

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           SL  AI+GS IS+ IFSE Y SSRWCL+ELVKILE + KYGQIV+PVFY V+P+D     
Sbjct: 63  SLVGAIQGSSISLTIFSENYTSSRWCLDELVKILECREKYGQIVIPVFYGVNPTDVRHQK 122

Query: 117 -GYCPSLGWMG-------------------------IFDIPTSESVL--IEGNVNDISKK 148
             Y  +L  +G                          FD  T   +L  I   VN +   
Sbjct: 123 GSYGEALAQLGKKYNLTTVQNWRNALKKVADLSGIKSFDYKTEVELLGEIINIVNLVLTS 182

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L    P  ++  L+G++  I+ +ES L   S     +GIWG+GGIGKTTIA  I+S + S
Sbjct: 183 LDKFDPESSR--LIGIDKQIQHLESLLHQESKYVRVIGIWGMGGIGKTTIAEEIFSKLRS 240

Query: 209 HFEGSYFMQNIRDESEKVGGL------------ANIHL-------NFERRRLSRMKVLIV 249
            ++G YF+ N+++ES + G +             ++ +       N+ +R++ RMKVLIV
Sbjct: 241 EYDGYYFLANVKEESSRQGTIYLKRKLFSAILGEDVEMDHMPRLSNYIKRKIGRMKVLIV 300

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ D    + L    D F  GSR+IITTRD Q+L     ++V  +++V  L+ +++L 
Sbjct: 301 LDDVNDSNLPEKLFENHDWFGRGSRIIITTRDKQVLI---ANKVDDIYQVGALNNSEALE 357

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS  AF QNH    + +LS +V+ YA G+PL L+VLG  L G  +E WES ++KL+ MP
Sbjct: 358 LFSLYAFNQNHFDMEYYKLSEMVVNYAKGIPLVLKVLGRLLCGKDKEVWESQLHKLENMP 417

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF-LDACRF---------SAK 419
           + DI   +++S+D LD +EQ I LD ACFF G      +N  LD+ +          S  
Sbjct: 418 NTDIYHAMRLSFDDLDRKEQKILLDLACFFIG------LNLKLDSIKVLLKDNERDDSVV 471

Query: 420 IGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
            G+ RL  K+LVTIS +N I+MHD++QEM  EIVRQESI+DPG RSRL  P D+Y+VL  
Sbjct: 472 AGLERLKDKALVTISEDNVISMHDIIQEMAWEIVRQESIEDPGNRSRLIDPNDVYEVLKY 531

Query: 479 N----------TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
           N           +LP   NL  L        S L+ F     N +   L    ++  P+ 
Sbjct: 532 NKGTEAIRSIRANLPAIQNL-QLSPHVFNKMSKLQ-FVYFRKNFDVFPLLPRGLQSFPAE 589

Query: 529 IGNLS----------------RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
           +  LS                 LV  DL+    LK +   + NL +L+ L ++GCL L++
Sbjct: 590 LRYLSWSHYPLISLPENFSAENLVIFDLSGSLVLK-LWDGVQNLMNLKVLTVAGCLNLKE 648

Query: 573 LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
           LP ++    +LE+L ++       +  S+  L KL  L   +C            + I  
Sbjct: 649 LP-DLSKATNLEFLEISSCSQLLSMNPSILSLKKLERLSAHHCS---------LNTLISD 698

Query: 632 RHCTSLKTLS 641
            H TSLK L+
Sbjct: 699 NHLTSLKYLN 708



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 8/136 (5%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L SLK L L GC  L +F   S N+ +LDL  T++   PS+ G  S L  L L   + +
Sbjct: 700 HLTSLKYLNLRGCKALSQFSVTSENMIELDLSFTSVSAFPSTFGRQSNLKILSLV-FNNI 758

Query: 547 KSVSSRLCNLKSLRRLNLSG-----CLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +S+ S   NL  LR L++        L L +LP  +  L++ +  +L    F  I    K
Sbjct: 759 ESLPSSFRNLTRLRYLSVESSRKLHTLSLTELPASLEVLDATDCKSLKTVYFPSIAEQFK 818

Query: 602 QLSKLSDLRLQNCKRL 617
           +  +  ++   NC  L
Sbjct: 819 ENRR--EILFWNCLEL 832


>gi|82542045|gb|ABB82030.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 698

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 253/691 (36%), Positives = 370/691 (53%), Gaps = 119/691 (17%)

Query: 23  RGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIVIFSEGYA 81
           RG+D R  F  HL  AL +  I TF DD +L+RG EIS  L  AI+ SKISIV+FS+GYA
Sbjct: 3   RGEDTRKTFTDHLYTALVQAGIHTFRDDDELSRGEEISKHLLRAIQESKISIVVFSKGYA 62

Query: 82  SSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSD-----AGYCPSL------------- 122
           SSRWCLNELV+IL+ KN K  QIV+P+FY +DPSD       +  +              
Sbjct: 63  SSRWCLNELVEILKCKNRKTDQIVLPIFYDIDPSDVRKQNGSFAEAFVKHEERFEEKLVK 122

Query: 123 -------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLF---PSDNKDQLVGVES 166
                        GW         E+  I+  V D+  KL   +   P    ++LVG++ 
Sbjct: 123 EWRKALEESGNLSGWNHNDMANGHEAKFIKEIVKDVLNKLDPKYLYVP----ERLVGMDR 178

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
           +   I   L + + +   VGI G+ GIGKTTIA  +++ +   FEGS F+ NI + S++ 
Sbjct: 179 LAHNIFDFLSTATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSNINETSKQF 238

Query: 227 GGLANIH--------------LNFERR-------RLSRMKVLIVFYDLTDLKQIDLLIGR 265
            GLA +               +N + R       RL R +VL+V  D+  L Q++ L+G 
Sbjct: 239 NGLAPLQKQLLHDILKQDAANINCDDRGKVLIKERLRRKRVLVVADDVAHLDQLNALMGE 298

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
              F PGSRVIITTRD  LL+          + +KEL+ ++SL LFS +AF    PA  +
Sbjct: 299 RSWFGPGSRVIITTRDSNLLRE-----ADQTYRIKELTRDESLRLFSWHAFKDTKPAEDY 353

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
           +ELS   + Y  G+PLAL+V+G+ L G + + W+  ++KL+R+P+ DIQ  L++S+D LD
Sbjct: 354 IELSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIDKLRRIPNHDIQGKLRISFDALD 413

Query: 386 DEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTISNNKITMHDL 443
            EE QN FLD ACFF    +  V   L A C ++ ++ +  L  +SL+ +    +TMHDL
Sbjct: 414 GEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRERSLIKVLGGTVTMHDL 473

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLD------------ 489
           L++MG E+VR+ S K+PGKR+R+W+ ED + VL+  + T +  G+ LD            
Sbjct: 474 LRDMGREVVRESSPKEPGKRTRIWNQEDAWNVLDHQKGTDVVEGLALDVRASEAKSLSAG 533

Query: 490 --------------SLKELYLGG---------------------CSNLKRFPEI-SCNIE 513
                         +LK+L+ G                        +L + P + S ++E
Sbjct: 534 SFAKMKFVLDMQYSNLKKLWKGKKMRNTLQTPKFLRLKIFNLNHSQHLIKTPNLHSSSLE 593

Query: 514 DLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
              LK  +++ E+  SIGNL  LV L+L  C  LK +   + N+KSL+ LN+SGC +LEK
Sbjct: 594 KPKLKGCSSLVEVHQSIGNLKSLVILNLEGCWRLKILPKSIGNVKSLKHLNISGCSQLEK 653

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           L E +G++ESL  L     + E+  SS+ QL
Sbjct: 654 LSERMGDMESLTELLADGIETEQFLSSIGQL 684


>gi|317106744|dbj|BAJ53239.1| JHS03A10.2 [Jatropha curcas]
          Length = 947

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 268/720 (37%), Positives = 383/720 (53%), Gaps = 123/720 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVFLSFRG+D R +F SHL AALC +KI+TFID+ L RG EIS SL  AIE SKIS+ 
Sbjct: 9   RYDVFLSFRGEDTRDSFTSHLYAALCDKKIQTFIDNNLVRGKEISSSLLKAIEESKISVP 68

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           I SE YASS+WCL EL +I++   K GQIV+PVFY + PSD            A Y  SL
Sbjct: 69  ILSENYASSKWCLEELAEIIKCMKKNGQIVIPVFYRIRPSDVRNQTGSFHDAFARYEKSL 128

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW  +   P  ES LI   + DI KKL+ +FPS +   L
Sbjct: 129 MVNKDKVQRWRAALKEVAGLSGWDSMAIRP--ESTLIHEVLKDILKKLNRIFPSYSSG-L 185

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           +G++S IK IE+ +   S+   TVGIWG+GG GKTT+A A Y  IS  FE SYF+ + R 
Sbjct: 186 IGIDSRIKHIEALISMESSAARTVGIWGMGGSGKTTLARATYDRISYQFERSYFLSDFRK 245

Query: 222 E-----------------SEKVGGLANIHL---NFERRRLSRMKVLIVFYDLTDLKQID- 260
           +                 +EK   + N+ L   ++ + R+ R KVL+V  D+    Q++ 
Sbjct: 246 QGKNSLFQLRDSLFTFILNEKDLKMRNLDLCLTDYIQDRIRRTKVLLVVDDVDSSAQLNQ 305

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           LL      F   S +++T+R+ Q+LKN     V  ++ + EL+ +++L LFS NAF Q +
Sbjct: 306 LLATEYSLFGSRSVILVTSRNRQVLKN----VVDVIYPMMELNEHEALRLFSLNAFKQAY 361

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P++  +E S  VI Y  G PLAL+VLGS L   SEE W SA+ +L+ +P  +I  VL+VS
Sbjct: 362 PSSDHMEKSKRVIAYTKGNPLALKVLGSLLFDRSEEYWCSALKRLENIPKPEIHNVLRVS 421

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKIT 439
           YD LD EEQ IFLD ACFF G +   ++  LD    S  + I  L+ + L+T+S + ++ 
Sbjct: 422 YDVLDSEEQRIFLDVACFFTGKNLDDIITILDGYFSSVYLTIKTLIDRCLITVSWDKRLE 481

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD-------- 489
           +HDLLQEMG +IV  ESI+ P  RSRLW+PEDI  +L EN  T    GI LD        
Sbjct: 482 VHDLLQEMGRKIVNDESIR-PENRSRLWNPEDIRHILLENKGTEAIEGICLDLSKAREIC 540

Query: 490 ------------------------------------------SLKELYLGGCSNLKRFPE 507
                                                     +L+ L+  GC  +K  P 
Sbjct: 541 LRRDAFAGMHNLRYLKFYESKDIAHGGGKMQPYDGGLRFLPTALRYLHWYGCP-VKTLPA 599

Query: 508 I--SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
              + N+  L++ E+ +++L + +  L  L  +DL+    L  +   L    ++ R+NL 
Sbjct: 600 YFGAENLVVLEMPESRVKKLWTGVQYLVNLKQIDLSWSEYLIKIPD-LSKAINIERINLQ 658

Query: 566 GCLKLEKLPEEIGNLESLEYLNLA-EKDFEKIPSSM-KQLSKLSDLRLQNCKRLQSLPEL 623
           GC  L +L     +L+ LE+L L+   +   IPSS+  ++ +  D  L  C +++  PE+
Sbjct: 659 GCTSLVELHSSTQHLKKLEFLALSCCVNVRSIPSSIGSKVIRCVD--LSYCLKVKRCPEI 716



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 91/201 (45%), Gaps = 49/201 (24%)

Query: 483 PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           P  ++   LK L L G SNL +FP+I            A  E+ S    LS      + N
Sbjct: 714 PEILSWKFLKVLRLEGMSNLVKFPDI------------AATEISSGCDELS------MVN 755

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLE-----------------------KLPEEIGN 579
           C  L S+ S +C  KSL+ L LS C KLE                       +LP  I N
Sbjct: 756 CEKLLSLPSSICKWKSLKYLYLSNCSKLESFPEILEPMNLVEIDMNKCKNLKRLPNSIYN 815

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCT 635
           L+ LE L L     E+IPSS++ L+ L+ L L +CK L+ LP    +L     ++   C 
Sbjct: 816 LKYLESLYLKGTAIEEIPSSIEHLTCLTVLDLSDCKNLERLPSGIDKLCQLQRMYLHSCE 875

Query: 636 SLKTLSNSSTLLTRSSKHWDI 656
           SL++L +    L +S  H D+
Sbjct: 876 SLRSLPD----LPQSLLHLDV 892



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 74/153 (48%), Gaps = 29/153 (18%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEI------------SCN--------------IE 513
           SLP+ I    SLK LYL  CS L+ FPEI             C               +E
Sbjct: 761 SLPSSICKWKSLKYLYLSNCSKLESFPEILEPMNLVEIDMNKCKNLKRLPNSIYNLKYLE 820

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            L LK TAIEE+PSSI +L+ L  LDL++C  L+ + S +  L  L+R+ L  C  L  L
Sbjct: 821 SLYLKGTAIEEIPSSIEHLTCLTVLDLSDCKNLERLPSGIDKLCQLQRMYLHSCESLRSL 880

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
           P+   +L  L+  +   K  E IP  + +  K+
Sbjct: 881 PDLPQSLLHLDVCSC--KLLETIPCGLYKYDKI 911


>gi|297740941|emb|CBI31253.3| unnamed protein product [Vitis vinifera]
          Length = 1426

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 268/744 (36%), Positives = 384/744 (51%), Gaps = 113/744 (15%)

Query: 24  GKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASS 83
           G+D R+NF  HL   L R  I TF DD+L RG EI   L   IE S+ISIV+FS+ YA S
Sbjct: 51  GEDTRNNFTDHLFVNLHRMGINTFRDDQLERGEEIKSELLKTIEESRISIVVFSKDYAQS 110

Query: 84  RWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------GYCPSLGWMGI--------F 128
           +WCL+EL KI+E + +  QIV+PVFY VDPSD        G   S+    +         
Sbjct: 111 KWCLDELAKIMECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVDEKKVQRWK 170

Query: 129 DIPTSESVLIEGNVND------ISKKLSDLFPSDN-------KDQLVGVESIIKEIESQL 175
           D  T  S L   +VND      I + +S +F            D +VG++  +KE++S L
Sbjct: 171 DSLTKASNLSGFHVNDGYESKHIKEIVSKIFKRSMNSTLLPINDDIVGMDFHLKELKSLL 230

Query: 176 LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK---------- 225
            S S + + VGI+G GGIGKTTIA  +Y+ I   F  + F+Q++R+   K          
Sbjct: 231 SSDSHDISVVGIYGTGGIGKTTIAKIVYNEIQYQFTSASFLQDVRETFNKRCQLQLQQQL 290

Query: 226 ----VGG---LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVI 276
               VG      NI+  ++  + RLS  KVLIV  D+ +L+Q++ + G    F PGS +I
Sbjct: 291 LHDTVGDDEEFRNINKGIDIIKARLSSKKVLIVIDDVDELEQLESVAGSPKWFGPGSTII 350

Query: 277 ITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYA 336
           ITTR+  LL  +  +     +E   L Y ++L LFSR+AF QN P   +++LSN +++YA
Sbjct: 351 ITTRNRHLLVEYEAT---ISYEATGLHYREALQLFSRHAFKQNDPKEDYVDLSNCMVQYA 407

Query: 337 NGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTA 396
            G+PLAL+VLGS L+GM+ E+WESA+NKLK   +  I  VL++S DGLD  ++ +FLD A
Sbjct: 408 QGLPLALKVLGSSLRGMTIEQWESALNKLKTNLNKKINDVLRISLDGLDYSQKEVFLDIA 467

Query: 397 CFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQES 456
           CFFKG  +  V   L  C+   KI I  L  + LVTI +N I MHDL+QEMG  IVR+E 
Sbjct: 468 CFFKGECEDFVSRILYDCKLDPKINIKNLHDRCLVTIRDNVIQMHDLIQEMGYAIVREEC 527

Query: 457 IKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYLGG--CSNLK--RFPEI 508
            +DP K SRLW  +DIY   +    +       ++L   KE+       + +K  R  +I
Sbjct: 528 PRDPHKWSRLWDADDIYNAFSRREGMENIQTISLDLSRSKEIQFSTEVFATMKQLRLLKI 587

Query: 509 SCNIED-----------------------LDLKETAIEELPSSI---------------- 529
            CN  D                       +  +   +  LPSS                 
Sbjct: 588 YCNDRDGLTREEYRVHLPKDFEFPHDLRYIHWQRCTLRSLPSSFCGEQLIEINLKSSNIK 647

Query: 530 ----GN--LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
               GN  L +L  +DL+N   L  +     ++ +L RLNL GC  L +L   IG+L+ L
Sbjct: 648 RLWKGNKRLEKLKGIDLSNSKQLVKMPE-FSSMPNLERLNLEGCTSLCELHSSIGDLKQL 706

Query: 584 EYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC---TSLKT 639
            YLNL   +  +  P++MK    L  L L  C++L+ +P++        + C   + +K 
Sbjct: 707 TYLNLRGCEQLQSFPTNMK-FESLEVLCLNQCRKLKKIPKILGNMGHLKKLCLNGSGIKE 765

Query: 640 LSNSSTLLTRSSKHWDIFNFSNCS 663
           L +S   L    +  +I + SNCS
Sbjct: 766 LPDSIGYL----ESLEILDLSNCS 785



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 94/176 (53%), Gaps = 9/176 (5%)

Query: 482  LPTGIN-LDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVD 537
            LP  I  L  L+ L L GCSNL+R PEI     N+  L L  TAI+ LP SI   + L  
Sbjct: 1001 LPNSIGCLQDLEILDLDGCSNLERLPEIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHH 1060

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            L L NC  L+S+   +C LKSL+ L + GC  LE   E   ++E L+ L L E    ++P
Sbjct: 1061 LTLENCRNLRSLPD-ICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELP 1119

Query: 598  SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLTR 649
            SS++ L  L  L L NCK L +LP     L C + +  R+CT L  L ++   L R
Sbjct: 1120 SSIEHLRGLDSLELINCKNLVALPISIGSLTCLTILRVRNCTKLHNLPDNLRGLRR 1175



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 30/204 (14%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
            SLP    L SLK L++ GCSNL+ F EI+ ++E L    L+ET I ELPSSI +L  L  
Sbjct: 1071 SLPDICGLKSLKGLFIIGCSNLEAFSEITEDMEQLKRLLLRETGITELPSSIEHLRGLDS 1130

Query: 538  LDLTNCSGLK----SVSSRLC-----------------NLKSLRR----LNLSGCLKLE- 571
            L+L NC  L     S+ S  C                 NL+ LRR    L+L GC  +E 
Sbjct: 1131 LELINCKNLVALPISIGSLTCLTILRVRNCTKLHNLPDNLRGLRRRLIKLDLGGCNLMEG 1190

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            ++P ++  L SLE L ++E     IP+ + QL KL  L + +C  L+ + ELP   + + 
Sbjct: 1191 EIPSDLWCLSSLESLYVSENHIRCIPAGITQLFKLKTLNMNHCPMLKEIGELPSSLTYME 1250

Query: 631  ARHCTSLKTLSNSSTLLTRSSKHW 654
            AR C  L+T + SS L +   K++
Sbjct: 1251 ARGCPCLETETFSSPLWSSLLKYF 1274



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 28/172 (16%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
            LP  I ++ SL+ L L  CS  ++F ++  N+  L   +L+E+ I+ELP SIG L  L+ 
Sbjct: 907  LPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRESGIKELPGSIGCLESLLQ 966

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRL-----------------------NLSGCLKLEKLP 574
            LDL+NCS  +  S    N+K LR L                       +L GC  LE+LP
Sbjct: 967  LDLSNCSKFEKFSEIQWNMKFLRVLYLKHTTIKELPNSIGCLQDLEILDLDGCSNLERLP 1026

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
            E   ++ +L  L+LA    + +P S++  + L  L L+NC+ L+SLP++ CG
Sbjct: 1027 EIQKDMGNLRALSLAGTAIKGLPCSIRYFTGLHHLTLENCRNLRSLPDI-CG 1077



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 29/170 (17%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIG------- 530
           LP  I  L+SL+ L L  CS  ++FPEI  N   ++ L L ETAI+ELP+SIG       
Sbjct: 766 LPDSIGYLESLEILDLSNCSKFEKFPEIRGNMKCLKRLSLDETAIKELPNSIGSLTSLEL 825

Query: 531 -----------------NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
                            N+ RL+ L+L   SG+K +   +  L+ L +L+LS C K EK 
Sbjct: 826 LSLRKCSKFEKFSDVFTNMRRLLILNLRE-SGIKELPGSIGCLEFLLQLDLSYCSKFEKF 884

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           PE  GN++ L+ L+L E   +++P+S+  ++ L  L L+ C + +   ++
Sbjct: 885 PEIRGNMKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDV 934



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 78/169 (46%), Gaps = 26/169 (15%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           S PT +  +SL+ L L  C  LK+ P+I  N   ++ L L  + I+ELP SIG L  L  
Sbjct: 719 SFPTNMKFESLEVLCLNQCRKLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLESLEI 778

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLS-----------------------GCLKLEKLP 574
           LDL+NCS  +       N+K L+RL+L                         C K EK  
Sbjct: 779 LDLSNCSKFEKFPEIRGNMKCLKRLSLDETAIKELPNSIGSLTSLELLSLRKCSKFEKFS 838

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +   N+  L  LNL E   +++P S+  L  L  L L  C + +  PE+
Sbjct: 839 DVFTNMRRLLILNLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEI 887



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 35/196 (17%)

Query: 499  CSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
            CS  ++F ++  N+  L   +L+E+ I+ELP SIG L  L+ LDL+ CS  +       N
Sbjct: 831  CSKFEKFSDVFTNMRRLLILNLRESGIKELPGSIGCLEFLLQLDLSYCSKFEKFPEIRGN 890

Query: 556  LKSLRRLNLS-----------------------GCLKLEKLPEEIGNLESLEYLNLAEKD 592
            +K L+RL+L                         C K EK  +   N+  L+ LNL E  
Sbjct: 891  MKRLKRLSLDETAIKELPNSIGSVTSLEILSLRKCSKFEKFSDVFTNMRHLQILNLRESG 950

Query: 593  FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS----IHARHCTSLKTLSNSSTLLT 648
             +++P S+  L  L  L L NC + +   E+         ++ +H T++K L NS   L 
Sbjct: 951  IKELPGSIGCLESLLQLDLSNCSKFEKFSEIQWNMKFLRVLYLKH-TTIKELPNSIGCL- 1008

Query: 649  RSSKHWDIFNFSNCSN 664
               +  +I +   CSN
Sbjct: 1009 ---QDLEILDLDGCSN 1021



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 79/139 (56%), Gaps = 4/139 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK + L     L + PE S   N+E L+L+  T++ EL SSIG+L +L  L+L  C 
Sbjct: 656 LEKLKGIDLSNSKQLVKMPEFSSMPNLERLNLEGCTSLCELHSSIGDLKQLTYLNLRGCE 715

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S  + +   +SL  L L+ C KL+K+P+ +GN+  L+ L L     +++P S+  L 
Sbjct: 716 QLQSFPTNM-KFESLEVLCLNQCRKLKKIPKILGNMGHLKKLCLNGSGIKELPDSIGYLE 774

Query: 605 KLSDLRLQNCKRLQSLPEL 623
            L  L L NC + +  PE+
Sbjct: 775 SLEILDLSNCSKFEKFPEI 793


>gi|357462141|ref|XP_003601352.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355490400|gb|AES71603.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1545

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 277/747 (37%), Positives = 400/747 (53%), Gaps = 114/747 (15%)

Query: 1    MASSSSSINMIPHPKH-DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEI 58
            M SSSS   ++  PK  DVF+SF G+D    F SHL  AL + KI TFIDD +L +G+EI
Sbjct: 441  MDSSSSFARVVVTPKEFDVFISFCGEDTGRKFTSHLYEALSK-KIITFIDDNELEKGDEI 499

Query: 59   SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS---- 114
            S +L  AIE S  SIVIFS+ YASS+WCLNELVKILE K   GQIV+P+FY +DPS    
Sbjct: 500  SSALIKAIEDSSASIVIFSKDYASSKWCLNELVKILECKKDQGQIVIPIFYEIDPSHVRN 559

Query: 115  -DAGYCPSLG---------------WMGIFDIPTS-----------ESVLIEGNVNDISK 147
             +  Y  +                 W        +           ES  I+  V D+ K
Sbjct: 560  QNGSYGQAFAKHARDLKQNKEMLKKWKDALTEAANLAGWHSQNYRIESNFIKDIVEDVLK 619

Query: 148  KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
            KL+  +P +   QLVG+E   +E ES L   S +  ++G+WG+GGIGKTT+A  +Y+ + 
Sbjct: 620  KLNRRYPFEVNMQLVGIEKKYEETESLLKILSNDVRSLGLWGMGGIGKTTLAKDLYAKLC 679

Query: 208  SHFEGSYFMQNIRDESEKVG--GLAN---------------IHLNFERRRLSRMKVLIVF 250
            S FE   F++N+R+ES   G  G  N               +     RRRL+  K L V 
Sbjct: 680  SQFERHCFLENVREESTGHGLNGSRNKLFSTLLGIPRDAPYVETPIFRRRLACEKSLTVL 739

Query: 251  YDLTDLKQIDLLIGRLDGFV--PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
             D+T L+Q+++L   +D     PGSR+I+TTRD Q+        +   +EV+ L+ ++SL
Sbjct: 740  DDVTTLEQVEIL--NIDNICLGPGSRIIVTTRDKQICNQFNECAI---YEVEGLNEDESL 794

Query: 309  TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
             +F   AF + +P  G+  LS   I Y  G PLAL+VLG+  +  S+E WES + KLK++
Sbjct: 795  EVFCLEAFREKYPKIGYRGLSKRAIGYCGGNPLALKVLGANFRTKSKEAWESELEKLKKI 854

Query: 369  PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFK-------GNDQYLVMNFLDACRFSAKIG 421
            P+  I  VLK+S+D LD  +Q IFLD ACFF        G D+  +   L+AC F A  G
Sbjct: 855  PNGRIHDVLKLSFDDLDRTQQEIFLDIACFFNLELHACFGRDE--ITTLLNACNFFAVSG 912

Query: 422  ISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NE 478
            I  L+ K+L+TI + +++TMHDLL EMG EIVR+ES+KDPG RSRLW P+++Y +L  N+
Sbjct: 913  IEVLLYKALLTIEHYDQVTMHDLLVEMGREIVRKESLKDPGSRSRLWDPKEVYDLLKYNK 972

Query: 479  NTSLPTGINLD--SLKELYLGGCS-----NLKR--------------------------- 504
             T +   I  D     +LYL   S     NL+                            
Sbjct: 973  GTEVVEVIFFDICDFGDLYLSSASFKSMTNLRYLHILNSLHNIFLTNGRNEGSIVHLHEG 1032

Query: 505  FPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
               +S  +  L  +   +  LP+S      LV L +TN S LK +   +  L +L ++ L
Sbjct: 1033 LEWLSDKLRYLKWESFPLNSLPASFC-AENLVQLSMTN-SKLKKLWDGIQKLDNLMKIEL 1090

Query: 565  SGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                 L ++P ++    +LE ++L+  ++  K+  S+    KLS LRL  CK+++SL   
Sbjct: 1091 DYSKDLVEIP-DLSRAPNLELVSLSYCENLCKLHESILTAPKLSYLRLDGCKKIKSLK-- 1147

Query: 624  PCGSSIHARHCTSLKTLSNSSTLLTRS 650
               ++IH++   SL +L+N S+L+  S
Sbjct: 1148 ---TNIHSKSLESL-SLNNCSSLVEFS 1170



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/123 (56%), Positives = 85/123 (69%), Gaps = 5/123 (4%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLS 63
           +SSI + P  K DVF+SFRG+  R NF  HL  AL + K+  F+DD  L +G+EIS SL 
Sbjct: 147 ASSIVVSP-KKFDVFISFRGEGTRRNFTGHLYDALSK-KVIIFMDDGDLEKGDEISSSLI 204

Query: 64  SAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLG 123
            AIE S  SIVIFS+ YASS+WCLNELVKILE K   GQIV+PVF+ ++PSD  +   LG
Sbjct: 205 KAIEESYTSIVIFSKDYASSKWCLNELVKILECKKDLGQIVIPVFFGINPSDVRF--QLG 262

Query: 124 WMG 126
             G
Sbjct: 263 SFG 265



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 18/105 (17%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGS 69
           +   K DVF+ F G+D R  F SHLN AL R  + TF+DD +L +G+EIS +L  AIE S
Sbjct: 17  VASKKFDVFIDFCGEDTRSKFTSHLNEALKRSGVRTFVDDSELEKGDEISSALIKAIEES 76

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
             SIVIFS+ Y                    GQIV+P+FY +DPS
Sbjct: 77  DASIVIFSKDYKDQ-----------------GQIVIPIFYEIDPS 104



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 11/176 (6%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            SL T I+  SL+ L L  CS+L  F   S N+  L L  TAI+ELPSS+    +L  L+L
Sbjct: 1145 SLKTNIHSKSLESLSLNNCSSLVEFSVTSENMTGLYLSCTAIQELPSSMWRNRKLTHLNL 1204

Query: 541  TNCSGLKSVSSRLCN---LKSLRRLNLSGCLKLEK-----LPEEIGNLESLEYLNLAEKD 592
            + C  L      L N   L+SL   +LSGC ++       +   I +++ L  +N    +
Sbjct: 1205 SKCKKLNIAEKNLPNDPGLESLIFCDLSGCTQINTWNLWFIFHFIRSVKHLRMVNCC--N 1262

Query: 593  FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
             E +P +++ +S L  L L  C++L+ +P+LP    ++ A +C  + T S   ++L
Sbjct: 1263 LESLPDNIQNISMLEWLCLDECRKLKFIPKLPVSLRNLSAANCIYVDTGSVQRSML 1318


>gi|147862827|emb|CAN78931.1| hypothetical protein VITISV_024045 [Vitis vinifera]
          Length = 1454

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 272/756 (35%), Positives = 386/756 (51%), Gaps = 122/756 (16%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VFLSFRG+D R  F  HL   L    I TF DD+L RG EI   L   IE S+IS+V+F
Sbjct: 21  EVFLSFRGEDTRTIFTDHLFVNLGGRGINTFRDDQLERGEEIKSELLKTIEESRISVVVF 80

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG------------ 123
           S  YA S+WCL+EL KI+E + +  QIV+PVFY VDPSD      S G            
Sbjct: 81  SRNYAHSKWCLDELAKIMECREEMEQIVLPVFYHVDPSDVRKQTGSFGEAFSIHERNVDE 140

Query: 124 -----WMGIFDIPTS-----------ESVLIEGNVNDISKKLS-DLFPSDNKDQLVGVES 166
                W  +F    S           ES+ IE   N+I K+L+  L   D  D +VG++ 
Sbjct: 141 KKVQRWR-VFLTEASNLSGFHVNDGYESMHIEEITNEILKRLNPKLLHID--DDIVGIDF 197

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            +K+++  L     +   VGI+G GGIGKTTIA  +Y+ I   F G+ F+Q++++ S+  
Sbjct: 198 RLKKLKLLLSGHLNDVRVVGIYGTGGIGKTTIAKIVYNEIQCQFSGASFLQDVKERSKNG 257

Query: 227 GGLA-------------------NIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
             L                    N  +N  + RL   K+LIV  D+  LKQ++ L     
Sbjct: 258 CQLELQKQLLRGILGKDIAFSDINEGINIIQGRLGSKKILIVIDDVDHLKQLESLAKSPK 317

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F PGSR+IITTRD  LL  +    V   + V EL Y ++L LFSR AF QN P   +++
Sbjct: 318 WFGPGSRIIITTRDQHLLGEYG---VNIPYRVTELHYKEALQLFSRYAFKQNVPKEDYVD 374

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
            SN ++ YA G+PLAL+VLGS L GM+ +EW SA+++LK+ P  +I  VL++S+DGLD+ 
Sbjct: 375 FSNCMVDYAQGLPLALKVLGSSLHGMTIDEWRSALDRLKKNPVKEINDVLRISFDGLDNL 434

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           E+++FLD ACFFK   +  V   LD C   A  GI+ L  K L+TIS+N I MHDL+++M
Sbjct: 435 EKDVFLDIACFFKKECKDFVSRILDGCNLFATHGITILHDKCLITISDNIIQMHDLIRQM 494

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQV--------------LNENTS------------ 481
           G  IVR E   DP K SRLW  +DIY                L+ +TS            
Sbjct: 495 GWAIVRDEYPGDPSKWSRLWDVDDIYDAFSRQEGMENIQTISLDMSTSKEMQFTTEVFAK 554

Query: 482 -------------------------LPTGINL-DSLKELYLGGCSNLKRFPE--ISCNIE 513
                                    LP  I     L+ L+  GC+ L+  P      N+ 
Sbjct: 555 MNKLRLLKVYCNDHDGLTREEYKVFLPKDIEFPHKLRYLHWQGCT-LRSLPSKFYGENLV 613

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           +++LK + I++L      L +L  +DL++   L  +  +  ++ +L RLNL GC+ L +L
Sbjct: 614 EINLKSSNIKQLWKGDKFLGKLKVIDLSDSKQLVKM-PKFSSMPNLERLNLEGCISLREL 672

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR 632
              IG+L+ L YLNL   +  +  P  MK    L  L L  C+ L+  P++  G+  H +
Sbjct: 673 HLSIGDLKRLTYLNLGGCEQLQSFPPGMK-FESLEVLYLDRCQNLKKFPKIH-GNMGHLK 730

Query: 633 HC----TSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
                 + +K L +S   L       ++ N SNCSN
Sbjct: 731 ELYLNKSEIKELPSSIVYLAS----LEVLNLSNCSN 762



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 107/175 (61%), Gaps = 9/175 (5%)

Query: 478  ENTS---LPTGIN-LDSLKELYLGGCSNLKRFPEISC-NIEDLDLKETAIEELPSSIGNL 532
            ENT+   LP GI  L +L+ L L GCSN +RFPEI    +  L L ET I+ELP SIG+L
Sbjct: 947  ENTAIKELPNGIGCLQALESLALSGCSNFERFPEIQMGKLWALFLDETPIKELPCSIGHL 1006

Query: 533  SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
            +RL  LDL NC  L+S+ + +C LKSL RL+L+GC  LE   E   ++E LE+L L E  
Sbjct: 1007 TRLKWLDLENCRNLRSLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETG 1066

Query: 593  FEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
              ++PS +  L  L  L L NC+ L +LP     L C +++  R+CT L+ L ++
Sbjct: 1067 ITELPSLIGHLRGLESLELINCENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDN 1121



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 99/175 (56%), Gaps = 8/175 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           S P G+  +SL+ LYL  C NLK+FP+I  N   +++L L ++ I+ELPSSI  L+ L  
Sbjct: 695 SFPPGMKFESLEVLYLDRCQNLKKFPKIHGNMGHLKELYLNKSEIKELPSSIVYLASLEV 754

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L+NCS L+       N+K LR L+L GC K EK  +    +E L  L+L E   +++P
Sbjct: 755 LNLSNCSNLEKFPEIHGNMKFLRELHLEGCSKFEKFSDTFTYMEHLRGLHLGESGIKELP 814

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLT 648
           SS+  L  L  L L  C + +  PE    + C   ++  + T++K L NS   LT
Sbjct: 815 SSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDN-TAIKELPNSMGSLT 868



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 31/190 (16%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLP  I  L SL+ L L GCSNL+ F EI+ ++E L+   L+ET I ELPS IG+L  L 
Sbjct: 1022 SLPNSICGLKSLERLSLNGCSNLEAFSEITEDMERLEHLFLRETGITELPSLIGHLRGLE 1081

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES-------------- 582
             L+L NC  L ++ + + +L  L  L +  C KL  LP+ + +L+               
Sbjct: 1082 SLELINCENLVALPNSIGSLTCLTTLRVRNCTKLRNLPDNLRSLQCCLLWLDLGGCNLME 1141

Query: 583  ------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH 630
                        L  L+++E     IP+ + QLSKL  L + +C  L+ + E+P   ++ 
Sbjct: 1142 GEIPSDLWCLSLLVSLDVSENHIRCIPAGITQLSKLKALFMNHCPMLEEIGEVPSSLTVM 1201

Query: 631  ARH-CTSLKT 639
              H C SL+T
Sbjct: 1202 EAHGCPSLET 1211



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 34/212 (16%)

Query: 482  LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
            LP+ I  L+SL+ L L  CS  ++FPEI  N   +++L L  TAI+ELP+S+G+L+ L  
Sbjct: 813  LPSSIGYLESLEILDLSYCSKFEKFPEIKGNMKCLKELYLDNTAIKELPNSMGSLTSLEI 872

Query: 538  LDLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L L  C                       SG+K + + +  L+SL  LNLS C   +K P
Sbjct: 873  LSLKECLKFEKFSDIFTNMGLLRELYLRESGIKELPNSIGYLESLEILNLSYCSNFQKFP 932

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC 634
            E  GNL+ L+ L L     +++P+ +  L  L  L L  C   +  PE+  G  + A   
Sbjct: 933  EIQGNLKCLKELCLENTAIKELPNGIGCLQALESLALSGCSNFERFPEIQMG-KLWALFL 991

Query: 635  --TSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
              T +K L  S   LTR    W   +  NC N
Sbjct: 992  DETPIKELPCSIGHLTRLK--W--LDLENCRN 1019


>gi|224126759|ref|XP_002329466.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870146|gb|EEF07277.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/513 (43%), Positives = 306/513 (59%), Gaps = 52/513 (10%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VFLSFRG++ R+ F +HL  ALC + I  FIDDKL RG  I+  L+  IE S+IS+VI
Sbjct: 1   YSVFLSFRGQETRNTFTAHLYHALCNKGINAFIDDKLERGEHITSQLNQIIEDSRISLVI 60

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----WMG 126
           FSE YA S +CL+ELVKILE K   GQ+V+PVFY VDPSD       +  SL     ++G
Sbjct: 61  FSENYARSIYCLDELVKILECKESKGQVVLPVFYNVDPSDVEEQKGSFGESLDFHETYLG 120

Query: 127 I-------FDIPTSESVLIEGNVND-------ISKKLSDLFPSDNKDQL------VGVES 166
           I       +    +++  + G   D       I K + +++   N   L      VG++ 
Sbjct: 121 INAEQLKQWREALTKAAQLSGWHLDRGNEAVFIRKIVEEVWAQLNHTSLHVAAYQVGLDQ 180

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            I+E+   L  GS+    VGI G+GG GKTT+A A+Y+ I++ FE   F+ N+R+ S++ 
Sbjct: 181 RIEELIHMLNIGSSNVCMVGICGLGGSGKTTVAKAVYNLINNQFEACCFLSNVREFSKRY 240

Query: 227 G--------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
           G                    G  +  +N  + RL   KVLIV  D+  L Q+  + G  
Sbjct: 241 GLVHLQEKLLFEILGDKTLVLGSVDRGINVIKDRLRHKKVLIVIDDVDHLDQLKQIAGER 300

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
           D F  GS++IITTRD +LL  H   R+     VKEL  +D+L LF  +AF  +HP   +L
Sbjct: 301 DWFGLGSKIIITTRDERLLVFHGVERL---LRVKELCCDDALMLFCWHAFRNSHPPIDYL 357

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
           E+S+ V+KY+ G+PLAL VLGS+L G S  E ES ++KL+R+P+  I +VLK+S+DGL+ 
Sbjct: 358 EISDQVVKYSKGLPLALVVLGSFLYGRSIPERESELDKLRRIPNKQIYEVLKISFDGLEH 417

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQE 446
            E+ IFLD ACFFKG ++  V+  LDAC F   IGI  L+ KSLV I NNK+ MHDLLQ 
Sbjct: 418 HERAIFLDIACFFKGQEKDYVIKILDACDFDPVIGIQVLMEKSLVYIENNKLQMHDLLQW 477

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
           MG ++V QES   PG+RSRLW  EDI  VL EN
Sbjct: 478 MGRQVVHQESPNVPGRRSRLWFHEDILHVLTEN 510


>gi|147769268|emb|CAN68108.1| hypothetical protein VITISV_013549 [Vitis vinifera]
          Length = 1236

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 272/712 (38%), Positives = 380/712 (53%), Gaps = 78/712 (10%)

Query: 1   MASSSSSINMI----PHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRG 55
           MASSS+ +++     PH  K+DVFLSFRG+D R +F +HL++AL ++ I TF D  L RG
Sbjct: 1   MASSSTILSVPSSSSPHRWKYDVFLSFRGEDTRQSFTAHLHSALSQKGINTFKDSLLPRG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS- 114
            +ISP+L  AIE S+ SI++ SE YASS WCL EL KILE   + G   +PVF+ VDPS 
Sbjct: 61  EKISPALLQAIEESRFSIIVLSENYASSSWCLEELTKILECVEEGGHTALPVFHNVDPSN 120

Query: 115 ----DAGYCPSLG---------------WMGIFDIPTS----------ESVLIEGNVNDI 145
               +  +  +                 W        +          ES +IE  V  I
Sbjct: 121 VRKQEGSFAKAFAKHEQVYKDKMEQVVKWRDALTEAATIAGWDTRNRDESEVIEQIVTRI 180

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
             +  D F S N D LVG++S ++++ S+L  GS +   VGIWG+ GIGKTTIA AIY  
Sbjct: 181 LNEPIDAF-SSNMDALVGMDSRMEDLLSRLCIGSDDVRFVGIWGMAGIGKTTIAEAIYDR 239

Query: 206 ISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
           I + F+G  F++N                +  + RL   +VLIV  D+   +Q++ L G 
Sbjct: 240 IYTKFDGCCFLKN----------------DIYKARLRPKRVLIVLDDVVHRQQLEALAGN 283

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F  GSR+IITTR+ +LL       V  +++V++L Y+++L LF + AF   HP   F
Sbjct: 284 HDWFGSGSRIIITTREKRLLIEQE---VDEIYKVEKLEYDEALKLFCQYAFRYKHPTEDF 340

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
           ++L +  + Y  G+PLAL+VLGS L   S  EW+S ++KL + P+ ++  VLK S+DGLD
Sbjct: 341 MQLCHHAVDYTGGLPLALKVLGSCLYRKSIHEWKSELDKLNQFPNKEVLNVLKTSFDGLD 400

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D E+N+FLD A F+KG D+  V+  LD   F     I  LV KSL+TIS+NK+ MHDLLQ
Sbjct: 401 DNEKNMFLDIAFFYKGEDKDFVIEVLD--NFFPVSEIGNLVDKSLITISDNKLYMHDLLQ 458

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI--NLDSLKELYL----- 496
           EMG EIVRQESIKDPGKRSRL   EDI+ VL  N+ T    G+  +L + KEL L     
Sbjct: 459 EMGWEIVRQESIKDPGKRSRLRVHEDIHDVLTTNKGTEAVEGMVFDLSASKELNLSVDAF 518

Query: 497 GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
              + L+     +C       +  + EEL +S  +  R +  D +  +  K   SR    
Sbjct: 519 AKMNKLRLLRFYNCQFYG-SSEYLSEEELIASTRDAWRWMGYDNSPYNDSKLHLSRDFKF 577

Query: 557 KS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
            S  LR L+  G   L+ LP  I + + L  LN+     +++    K   KL  ++L + 
Sbjct: 578 PSNNLRSLHWHG-YPLKSLP-SIFHPKKLVELNMCYSLLKQLWEGKKAFEKLKFIKLSHS 635

Query: 615 KRLQSLPEL---PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
           + L   P+    P    I    CTSL  L  S   L    K     N   CS
Sbjct: 636 QHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGAL----KELIFLNLEGCS 683



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 96/153 (62%), Gaps = 8/153 (5%)

Query: 475 VLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEI-SCNIEDLD---LKETAIEELP 526
           +LN  TSL    P+   L  L  L L GCS L++FPE+   N+EDL    L+ TAI ELP
Sbjct: 654 ILNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSGISLEGTAIRELP 713

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
           SSIG L+RLV L+L NC  L S+   +C L SL+ L LSGC KL+KLP+++G L+ L  L
Sbjct: 714 SSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVEL 773

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           ++     +++PSS+  L+ L +L L  CK  +S
Sbjct: 774 HVDGTGIKEVPSSINLLTNLQELSLAGCKGWES 806



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 109/208 (52%), Gaps = 26/208 (12%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
            SLP  I  L SL+ L L GCS LK+ P+    + C +E L +  T I+E+PSSI  L+ 
Sbjct: 734 ASLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVE-LHVDGTGIKEVPSSINLLTN 792

Query: 535 LVDLDLTNCSGLKSVS------------------SRLCNLKSLRRLNLSGCLKLE-KLPE 575
           L +L L  C G +S S                   RL  L SL+ LNLS C  LE  LP 
Sbjct: 793 LQELSLAGCKGWESKSWNLAFSFGSWPTLEPLRLPRLSGLYSLKILNLSDCNLLEGALPI 852

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
           ++ +L SLE L+L+   F  IP+++  LS+L  L L  CK LQSLPELP     ++A  C
Sbjct: 853 DLSSLSSLEMLDLSRNSFITIPANLSGLSRLHVLMLPYCKSLQSLPELPSSIRYLNAEAC 912

Query: 635 TSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           TSL+T S S +  T          FSNC
Sbjct: 913 TSLETFSCSPSACTSKRYGGLRLEFSNC 940



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 8/121 (6%)

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI-GNLESLEY 585
           S+   L R++   L  C+ L  +   +  LK L  LNL GC KLEK PE + GNLE L  
Sbjct: 645 SAAPKLRRII---LNGCTSLVKLHPSIGALKELIFLNLEGCSKLEKFPEVVQGNLEDLSG 701

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTLS 641
           ++L      ++PSS+  L++L  L L+NCK+L SLP+  C      ++    C+ LK L 
Sbjct: 702 ISLEGTAIRELPSSIGGLNRLVLLNLRNCKKLASLPQSICELISLQTLTLSGCSKLKKLP 761

Query: 642 N 642
           +
Sbjct: 762 D 762


>gi|356560709|ref|XP_003548631.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1067

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 252/699 (36%), Positives = 371/699 (53%), Gaps = 95/699 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFL+FRG+D R  FVSHL AAL    I TFID KL +G E+   L + I+GS+ISIV+
Sbjct: 13  NDVFLNFRGEDTRKTFVSHLYAALSNAGINTFIDHKLRKGTELGEELLAVIKGSRISIVV 72

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-CPSLG----------- 123
           FS  YASS WCL+ELV+I+  +  YGQ+VVPVFY VDPSD  +   + G           
Sbjct: 73  FSANYASSTWCLHELVEIIYHRRAYGQVVVPVFYDVDPSDVRHQTGAFGQRLKALMQKSK 132

Query: 124 --------WMGIFDIPT-----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                   W       +           SE  L++  V DIS+KL     S   +  VG+
Sbjct: 133 PIDFMFTSWKSALKEASDLVGWDARNWRSEGDLVKQIVEDISRKLDTRLLSI-PEFPVGL 191

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ES ++E+   + + S     VGIWG+GG+GKTT+A  IY+ I   F  S F++NIR+  E
Sbjct: 192 ESRVQEVIEFINAQSDTGCVVGIWGMGGLGKTTMAKVIYNKIHRRFRHSSFIENIREVCE 251

Query: 225 K------------VGGLANIH-----LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
                        V  + NI      +  E++   R + LIV  D+TD+KQ+  L    +
Sbjct: 252 NDSRGCFFLQQQLVSDILNIRVGMGIIGIEKKLFGR-RPLIVLDDVTDVKQLKALSLNRE 310

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
               G   IITTRDV+LL   +     HV  +KE+  N+SL LFS +AF Q HP    ++
Sbjct: 311 WTGTGCVFIITTRDVRLLNVLKPYHRVHVCRIKEMDENESLELFSWHAFRQAHPREDLIK 370

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LS  ++ Y  G+PLAL+VLGSYL   ++EEWES + KL+++P+  +Q+ L++SYD LD E
Sbjct: 371 LSMDIVAYCGGLPLALEVLGSYLCERTKEEWESVLAKLRKIPNDQVQEKLRISYDDLDCE 430

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQE 446
           E+NIFLD   FF G D+  V   L  C   A+IGI+ LV +SL+ +  NNKI MH+LL++
Sbjct: 431 EKNIFLDICFFFIGKDRVNVTEILKGCDLHAEIGITILVERSLIKLEKNNKIKMHNLLRD 490

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------------PTGINLDS---- 490
           MG EIVRQ S+++P KRSRLW  +++  +L E+T               +G++ ++    
Sbjct: 491 MGREIVRQSSLEEPEKRSRLWVHQEVLDLLLEHTGTKAIEGLALKLQRTSGLHFNTKAFE 550

Query: 491 ----LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGN--------------- 531
               L+ L L     +  +  ++ N+  L L+   ++ +P ++                 
Sbjct: 551 KMKKLRLLQLDHVQLVGDYEYLNKNLRWLCLQGFPLQHIPENLYQENLISIELKYSNIRL 610

Query: 532 -------LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
                  L RL  L+L++   L   +     L +L +LNL  C +L ++ + IG+L +L 
Sbjct: 611 VWKEPQLLQRLKILNLSHSRNLMH-TPDFSKLPNLAKLNLKDCPRLSEVHQSIGDLNNLL 669

Query: 585 YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            +NL +      +P  + QL  L  L    C ++  L E
Sbjct: 670 VINLMDCTSLSNLPRRIYQLKSLQTLIFSGCSKIDMLEE 708



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 3/122 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L L    NL   P+ S   N+  L+LK+   + E+  SIG+L+ L+ ++L +C+
Sbjct: 618 LQRLKILNLSHSRNLMHTPDFSKLPNLAKLNLKDCPRLSEVHQSIGDLNNLLVINLMDCT 677

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L ++  R+  LKSL+ L  SGC K++ L E+I  +ESL  L   +   +++P S+ +L 
Sbjct: 678 SLSNLPRRIYQLKSLQTLIFSGCSKIDMLEEDIVQMESLTTLIAKDTAVKEMPQSIVRLK 737

Query: 605 KL 606
            +
Sbjct: 738 NI 739


>gi|359493410|ref|XP_002279970.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1212

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 269/696 (38%), Positives = 371/696 (53%), Gaps = 102/696 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+NF +HL   L  + I TFIDD KL RG  ISP+L +AIE S  SI+
Sbjct: 151 YDVFLSFRGEDTRNNFTAHLYQELRTKGINTFIDDDKLERGRLISPALVTAIENSMFSII 210

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           + SE YASS+WCL EL KILE     GQ V+P+FY VDPSD       +  +L       
Sbjct: 211 VLSENYASSKWCLEELAKILECMKTRGQRVLPIFYNVDPSDVKKQRGKFGAALAEHEKNL 270

Query: 124 ---------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W           G      +E +LI+  V  +  KL ++   D  ++LVG+
Sbjct: 271 TENMERVQIWKDALTQVANLSGWESRNKNELLLIKEIVKHVFNKLINICSGDT-EKLVGI 329

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ++ I+EI+ +L   S +   +GIWG+GGIGKTT+A A+Y+ IS  FE   F++++     
Sbjct: 330 DARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHSFLEDVGKVLV 389

Query: 225 KVG--GLANIHL--------------NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
             G   L  I L               F + RL   K L+V  ++ D K ++ L+G  D 
Sbjct: 390 NKGLIKLQQIFLYDLLEEKDLNTKGFTFIKARLHSKKALVVLDNVNDPKILECLVGNWDW 449

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F  GSR+IIT RD  LL  H        ++V   +Y+++     R++         FLEL
Sbjct: 450 FGRGSRIIITARDKHLLIAHGVL----CYQVPTFNYDEAYGFIKRHSLKHELLIGDFLEL 505

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           S  +I YA G+PLAL+VL S L GMS++E  + ++KLK   H  I++VL++SYDGLDD+E
Sbjct: 506 SKEMIDYAKGLPLALKVLCSSLFGMSKKERRNQLDKLKSTLHKKIEEVLRISYDGLDDKE 565

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           +NIFLD ACFFKG D+  V+  LD C F +  GI  LV KSL++I  NK+ MHDL+QEMG
Sbjct: 566 KNIFLDIACFFKGEDKDYVIEILDGCGFFSSCGIRTLVNKSLISIYGNKLEMHDLIQEMG 625

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVLNENT----------------------SLPTGI 486
            EIVRQ+ +++ GKRSRLW  EDI  VL +NT                      SLP   
Sbjct: 626 IEIVRQQFVQELGKRSRLWFHEDIIDVLKKNTGSEKIEGLFLSSYFDLYGYSLKSLPNDF 685

Query: 487 NLDSLKELYLGGCSNLKRF------------------------PEIS--CNIEDLDLKE- 519
           N  +L  L +  CS++K+                         P +S   N+E L L++ 
Sbjct: 686 NAKNLVHLSM-PCSHIKQLWKGIKVLEKLKCMDLSHSKYLIETPNLSRVTNLERLVLEDC 744

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
            ++ ++  S+ +L  L  L   NC  LKS+ S   +LKSL  L LSGC K E+ PE  G 
Sbjct: 745 VSLCKVHPSLRDLKNLNFLSFKNCKMLKSLPSGPYDLKSLATLILSGCSKFEQFPENFGY 804

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           LE L+ L        ++PSS+  L  L  L    CK
Sbjct: 805 LEMLKKLYADGTALRELPSSLSSLRNLEILSFVGCK 840



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 25/202 (12%)

Query: 481 SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+G  +L SL  L L GCS  ++FPE    +E    L    TA+ ELPSS+ +L  L 
Sbjct: 773 SLPSGPYDLKSLATLILSGCSKFEQFPENFGYLEMLKKLYADGTALRELPSSLSSLRNLE 832

Query: 537 DLDLTNCSGLKSVS---------------SRLCNLKSLRRLNLSGC-LKLEKLPEEIGNL 580
            L    C G  S S                 L  L SLR+L+LS C L  E     +  L
Sbjct: 833 ILSFVGCKGPPSASWLFPRRSSNSTGFILHNLSGLCSLRKLDLSDCNLSDETNLSCLVYL 892

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK- 638
            SL+ L L E +F  +P+ + +LS+L   RL NC RLQ LP+LP     + AR+CTSLK 
Sbjct: 893 SSLKDLYLCENNFVTLPN-LSRLSRLERFRLANCTRLQELPDLPSSIVQVDARNCTSLKN 951

Query: 639 -TLSNSSTLLTRSSKHWDIFNF 659
            +L N  + L ++   WD+ NF
Sbjct: 952 VSLRNVQSFLLKNRVIWDL-NF 972


>gi|193584702|gb|ACF19651.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa]
          Length = 1125

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 257/708 (36%), Positives = 381/708 (53%), Gaps = 110/708 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           KHDVFLSFRG+D R +F+SHL+A+L    I  F DD+ L RG+ +S +L  AI  S+IS+
Sbjct: 40  KHDVFLSFRGEDTRTSFISHLSASLQNAGIIVFKDDQSLERGDRVSSTLLYAIGESRISV 99

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY--------------- 118
           ++FS  YA S WCL EL+KI+E     GQ+V+PVFY VDPS+  +               
Sbjct: 100 IVFSINYADSSWCLQELLKIMECHKTIGQVVLPVFYHVDPSEVRHQTGDFGKSFQKSLNR 159

Query: 119 -------------------------------------CPSLGWMGIFDIPT-SESVLIEG 140
                                                C + G  G   + + +E+ +I+ 
Sbjct: 160 LSQEEESMVLKWGNNVLPGDGIRAVNQDTVLKWRDALCEASGLAGCVVLNSRNENEVIKD 219

Query: 141 NVNDISKKL--SDLFPSDNKDQLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTT 197
            V ++++ L  +DLF ++N    VGVES ++++   L +  T +   +G+WG+GGIGKTT
Sbjct: 220 IVENVTRLLDKTDLFVANNP---VGVESRVQDMIQLLDTQQTNDVLLLGMWGMGGIGKTT 276

Query: 198 IASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH---------------------LNF 236
           IA AIY+ I  +FEG  F+ NIR+  EK  G  N+                      ++ 
Sbjct: 277 IAKAIYNKIGRNFEGRSFIANIREVWEKDCGQVNLQEQLMYDIFKETTTKIQNVESGISI 336

Query: 237 ERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV 296
            + RL   +VL+V  D++ L Q++ L G    F PGSR+IITTRD  +L   RG+RV  +
Sbjct: 337 LKGRLCHKRVLLVLDDVSKLDQLNALCGSCKWFAPGSRIIITTRDKHVL---RGNRVDRI 393

Query: 297 FEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE 356
           + +KE+   +SL LFS +AF Q  P   F E+S  V+ Y+ G+PLAL+VLGSYL      
Sbjct: 394 YIMKEMDETESLELFSWHAFKQTSPTEDFSEISKNVVMYSGGLPLALEVLGSYLFDREVL 453

Query: 357 EWESAVNKLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACR 415
           EW   + KLK +P+  + + LK+SYDGL DD E++ FLD ACFF G D+  V+  L+ C 
Sbjct: 454 EWVCVLEKLKIIPNHQLHEKLKISYDGLNDDTEKSTFLDIACFFIGMDRNDVIQILNGCG 513

Query: 416 FSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
           F A+IGIS LV +SLVT+ + NK+ MHDLL++MG EI+R++S  +P +RSRLW  ED+  
Sbjct: 514 FFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPMEPEERSRLWFQEDVLD 573

Query: 475 VLNENT--------------------SLPTGINLDSLKELYLGGCSNLKRFPEISCNIED 514
           VL+E+T                    S     N+  L+ L L G      F  +S N+  
Sbjct: 574 VLSEHTGTKAVEGLTLKLPGHNAQRFSTKAFENMKKLRLLQLSGVQLDGDFKYLSRNLRW 633

Query: 515 LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           L      +  LPS+      +V ++L N S +K +   +  ++ L+ LNLS    L + P
Sbjct: 634 LHWNGFPLTCLPSNFYQ-RNIVSIELEN-SNVKLLWKEMQRMEQLKILNLSHSHYLTQTP 691

Query: 575 EEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +  N+ +LE L L +     ++  S+  L K+  + L++C  L +LP
Sbjct: 692 -DFSNMPNLEKLILKDCPRLSEVSQSIGHLKKVLLISLKDCISLCNLP 738



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK L L     L + P+ S   N+E L LK+   + E+  SIG+L +++ + L +C 
Sbjct: 673 MEQLKILNLSHSHYLTQTPDFSNMPNLEKLILKDCPRLSEVSQSIGHLKKVLLISLKDCI 732

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++   + +LKSL+ L LSGCLK++KL E++  ++SL  L        K+P S+
Sbjct: 733 SLCNLPRNIYSLKSLKTLILSGCLKIDKLEEDLEQMKSLTTLMAGNTGITKVPFSV 788


>gi|356495057|ref|XP_003516397.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1067

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 287/808 (35%), Positives = 397/808 (49%), Gaps = 173/808 (21%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           +A+S   ++ +P  K+DVF++FRGKD+R  F+ +L  A  +++I  FIDDKL +G+EI P
Sbjct: 2   VAASKQMLDNVPQMKYDVFVNFRGKDIRDGFLGYLTRAFHQKQIYAFIDDKLEKGDEIWP 61

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           SL  AI+GS IS+ IFSE Y SSRWCL ELVKILE + KY Q V+PVFY V+P+D     
Sbjct: 62  SLVGAIQGSSISLTIFSENYTSSRWCLEELVKILECREKYRQTVIPVFYGVNPTDVRHQK 121

Query: 117 -GYCPSLGWMGI-------------------------FDIPTSESVL--IEGNVNDISKK 148
             Y  +L  +G                          FD  T   +L  I   VN +   
Sbjct: 122 GNYGEALAVLGKKYNLTTVQNWRNALKKAADLSGIKSFDYKTEVDLLGEIINTVNLVLIS 181

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L D  P + K   +G+E  I+ +ES L   S     +GIWG+GGIGKTTIA  ++  + S
Sbjct: 182 L-DTHPFNIKGH-IGIEKSIQHLESLLHQESKYVRVIGIWGMGGIGKTTIAEEMFKKLYS 239

Query: 209 HFEGSYFMQNIRDESEKVGGLA------------NIHL-------NFERRRLSRMKVLIV 249
            ++  YF++N  +ES K G ++            N+ +       N+ +R++  MKVLIV
Sbjct: 240 EYDSYYFLENEEEESRKHGTISLKEKLFSALLGENVKMNILHGLSNYVKRKIGFMKVLIV 299

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ D   ++ LIG LD F  GSR+IITTRD Q+L     ++V  ++ V  L+ +++L 
Sbjct: 300 LDDVNDSDLLEKLIGNLDWFGRGSRIIITTRDKQVLI---ANKVDDIYHVGALNSSEALE 356

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS  AF QNH    + +LS  V+ Y+ G+PL L+VLG  L G  +E WES ++KLK MP
Sbjct: 357 LFSFYAFNQNHLDMEYYKLSKRVVNYSQGIPLVLKVLGHLLCGKDKEVWESQLDKLKNMP 416

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKG----NDQYLVMNFLDACRFSAKIGISRL 425
           + DI   +++SYD LD +EQ I LD ACFF G     D   V+        S  +G+ RL
Sbjct: 417 NTDIYNAMRLSYDDLDRKEQKILLDLACFFMGLNLKVDHIKVLLKDSEKDDSVVVGLERL 476

Query: 426 VGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS--- 481
             K+L+TIS +N I+MHD++QEM  EIVRQESI+DPG RSRL  P DIY+VL  N     
Sbjct: 477 KDKALITISEDNIISMHDIIQEMAWEIVRQESIEDPGNRSRLMDPNDIYEVLKYNKGTEA 536

Query: 482 -------------------------------LPTGINLDSLKELYLGGCS---------- 500
                                           P+  N D L  L  G  S          
Sbjct: 537 IRSIRADMSVIRKLQLSPHIFTKMSKLQFLYFPSKYNQDGLSLLPHGLQSFPVELRYVAW 596

Query: 501 ---NLKRFPE--ISCNIEDLDLKETAIEELPSSIGNLSRLVD------------------ 537
               LK  P+   + NI   DL  + +E+L   + NL  L +                  
Sbjct: 597 MHYPLKSLPKNFSAKNIVMFDLSCSQVEKLWDGVQNLMNLKELKVSGSENLKELPDLSKA 656

Query: 538 -----LDLTNCSGLKSVSSRLCNLK-------------------SLRRLNLSGCLKLEK- 572
                LD+  C  L SVS  + +LK                   SL  LNL  C KL + 
Sbjct: 657 TNLEVLDINICPRLTSVSPSILSLKRLSIAYCSLTKITSKNHLPSLSFLNLESCKKLREF 716

Query: 573 -------------------LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
                              LP   G    L+ L L +     +PSS K L++L  L +  
Sbjct: 717 SVTSENMIELDLSSTRVNSLPSSFGRQSKLKILRLRDSGINSLPSSFKNLTRLQYLTVYK 776

Query: 614 CKRLQSLPELPCG-SSIHARHCTSLKTL 640
            + L +L ELP    ++ A  CTSLKT+
Sbjct: 777 SRELCTLTELPLSLKTLDATDCTSLKTV 804



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T + +  +L SL  L L  C  L+ F   S N+ +LDL  T +  LPSS G  S+L  L 
Sbjct: 691 TKITSKNHLPSLSFLNLESCKKLREFSVTSENMIELDLSSTRVNSLPSSFGRQSKLKILR 750

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLK---LEKLPEEIGNLESLEYLNLAEKDFEKI 596
           L + SG+ S+ S   NL  L+ L +    +   L +LP  +  L++ +  +L    F  I
Sbjct: 751 LRD-SGINSLPSSFKNLTRLQYLTVYKSRELCTLTELPLSLKTLDATDCTSLKTVLFPSI 809

Query: 597 PSSMKQLSKLSDLRLQNCKRL 617
               K+  K  ++   NC +L
Sbjct: 810 AQQFKENRK--EVLFWNCLKL 828


>gi|93117597|gb|ABE99701.1| TIR-NBS-LRR disease resistance-like protein [Populus balsamifera]
          Length = 1116

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 263/737 (35%), Positives = 387/737 (52%), Gaps = 132/737 (17%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  A  +  I TF D +++ RG EIS  L  AI+ SK
Sbjct: 48  PKGAYDVFLSFRGEDNRKTFTDHLYTAFVQAGIHTFRDQNEIPRGEEISKHLHKAIQESK 107

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
           IS+V+FS+GYASSRWCLNELV+ILESKN K  QIV+P+FY +DPS+       +  +   
Sbjct: 108 ISVVVFSKGYASSRWCLNELVEILESKNRKTDQIVLPIFYDIDPSEVRKQTGSFAKAFHR 167

Query: 123 -----------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNK 158
                                  GW  + D+    ES LI+  V D+  KL D    +  
Sbjct: 168 HEEAFTEKVKEWRKALEEAGNLSGW-NLNDMENGHESKLIQEIVKDVLNKL-DPKHINVA 225

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             LVG++ ++  I   L + + E   VGI G+ GIGKT+IA  +++     FEGS F+ N
Sbjct: 226 THLVGIDPLVLAISDFLSTATDEVCIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSN 285

Query: 219 IRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLK 257
           I + SE+  GL  +                      +   + R+   +VL+V  D+    
Sbjct: 286 INETSEQSNGLVLLQEQLLHDILKQNTVNISNVVRGMVLIKERICHKRVLVVVDDVAHQN 345

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++ L+G    F PGSRVIITT+D  LL      +V   + V+EL  ++SL LFS +AFG
Sbjct: 346 QLNALMGERSWFGPGSRVIITTKDEHLLL-----KVDRTYRVEELKRDESLQLFSWHAFG 400

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
              PA  ++ELSN V+ Y  G+PLAL+VLGS L G +   W+  ++KL+++P+ +IQK L
Sbjct: 401 DTKPAKDYVELSNDVVDYCGGLPLALEVLGSCLPGKNRARWKCLIDKLRKIPNREIQKKL 460

Query: 378 KVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTI-S 434
           ++S+D LDD + QN FLD ACFF G ++  V   L+A C ++ +  +  L  +SL+ + +
Sbjct: 461 RISFDSLDDHQLQNTFLDIACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDA 520

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS-- 490
             KI+MHDLL++MG +I+ +ES   PGKRSR+W  ED + VLN++  T +  G+ LD+  
Sbjct: 521 FGKISMHDLLRDMGRDIIHKESPGHPGKRSRIWQREDAWNVLNKHMGTEVVEGLALDARA 580

Query: 491 ----------------LKELYLGGC--------------------SNLKRFPE--ISCNI 512
                           LK L + G                       LK FP   +  N+
Sbjct: 581 SEDKSLSTGSFTKMRFLKLLQINGVHLTGPFKLLSEELIWICWLECPLKSFPSDLMLDNL 640

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTN----------------------CSGLKSVS 550
             LD++ + I+EL      L++L  L+ ++                      CS L  V 
Sbjct: 641 VVLDMQYSNIKELWKEKKILNKLKILNFSHSKHLIKTPNLHSSSLEKLMLEGCSSLVEVH 700

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
             + +LKSL  LNL GC +++ LPE I +++SLE LN++     EK+P  M  +  L++L
Sbjct: 701 QSIGHLKSLVLLNLKGCWRIKILPESICDVKSLESLNISGCSQLEKLPERMGDIESLTEL 760

Query: 610 ---RLQNCKRLQSLPEL 623
               +QN + L S+  L
Sbjct: 761 LADEIQNEQFLFSIGHL 777



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 84/147 (57%), Gaps = 7/147 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEI-SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           L+ LK L      +L + P + S ++E L L+  +++ E+  SIG+L  LV L+L  C  
Sbjct: 660 LNKLKILNFSHSKHLIKTPNLHSSSLEKLMLEGCSSLVEVHQSIGHLKSLVLLNLKGCWR 719

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS---MKQ 602
           +K +   +C++KSL  LN+SGC +LEKLPE +G++ESL  L   E   E+   S   +K 
Sbjct: 720 IKILPESICDVKSLESLNISGCSQLEKLPERMGDIESLTELLADEIQNEQFLFSIGHLKH 779

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSI 629
           + KLS LR+ N  +  SL    C S I
Sbjct: 780 VRKLS-LRVSNFNQ-DSLSSTSCPSPI 804



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 37/215 (17%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  I ++ SL+ L + GCS L++ PE   +IE L      E   E+   SIG+L  +  
Sbjct: 723 LPESICDVKSLESLNISGCSQLEKLPERMGDIESLTELLADEIQNEQFLFSIGHLKHVRK 782

Query: 538 LDL------------TNCSGLKS-------------VSSRLCNLKSLRRLNLSGCLKLEK 572
           L L            T+C    S             + +   + +S++RL L+     E 
Sbjct: 783 LSLRVSNFNQDSLSSTSCPSPISTWISASVLRVQPFLPTSFIDWRSVKRLKLANYGLSES 842

Query: 573 LPEEI--GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
               +  G L SL+ LNL+   F  +PS +  L+KL  LR+QNC  L S+ ELP     +
Sbjct: 843 ATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQHLRVQNCSNLVSISELPSSLEKL 902

Query: 630 HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           +A  C S+K +      L   SK   I +   C N
Sbjct: 903 YADSCRSMKRVC-----LPIQSKTNPILSLEGCGN 932


>gi|357449525|ref|XP_003595039.1| TMV resistance protein N [Medicago truncatula]
 gi|355484087|gb|AES65290.1| TMV resistance protein N [Medicago truncatula]
          Length = 1128

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 273/731 (37%), Positives = 395/731 (54%), Gaps = 100/731 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           + +SSSS   +     DVF+SFRG D R  F SHLN AL +  ++TFIDD +L +G+EIS
Sbjct: 7   IGASSSSTLEVASNSFDVFISFRGDDTRRKFTSHLNEALKKSGLKTFIDDNELKKGDEIS 66

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
            +L  AIE S  SIVI SE YASS+WCLNELVKILE K   GQIV+P+FY +DPS   Y 
Sbjct: 67  SALIKAIEESCASIVILSENYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRYQ 126

Query: 119 CPSLG-------------------W---------MGIFDIPTS--ESVLIEGNVNDISKK 148
             S G                   W         +  +D   S  ES  I+  V D+ +K
Sbjct: 127 IGSYGQAFAKYEKNLRHKKDNLQKWKDALTEVSKLSGWDSKNSRIESDFIKDIVKDVLEK 186

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L+   P +   +LVG+E   +EIE    +GS +  T+G+WG+GGIGKT +A ++Y N  S
Sbjct: 187 LNHGRPFEANKELVGIEEKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKSLYGNYCS 246

Query: 209 HFEGSYFMQNIRDESEKVG----------GLANIHLN---FE----RRRLSRMKVLIVFY 251
            FE   F++N+R+ES + G           L  + L+   FE    ++RL R K LIV  
Sbjct: 247 QFEYHCFLENVREESTRCGLNVVRKKLFSTLLKLGLDAPYFETPTFKKRLERAKCLIVLD 306

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+  L+Q + L     G   GSRVI+TTRD ++     G  V   +EVKEL+ ++SL LF
Sbjct: 307 DVATLEQAENLKI---GLGLGSRVIVTTRDRKICHQFEGFVV---YEVKELNEDESLQLF 360

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
             NAF + H   G+ ELS   I Y  G PLAL+VLG+  +  S+E  ES + K+K +P+ 
Sbjct: 361 CCNAFQEKHAKEGYEELSKSAIGYCRGNPLALKVLGANFRAKSKEACESELEKIKEIPYA 420

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFF---------KGNDQYLVMNFLDACRFSAKIGI 422
            I  VLK+S+  LD  +++IFLD ACFF          G  +Y++ +  +AC+F     I
Sbjct: 421 GIHDVLKLSFYDLDRTQRDIFLDIACFFYPKINHFYCYGRREYII-DLFNACKFYPATSI 479

Query: 423 SRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NEN 479
             L+ KSL+T    ++I MHDL+ EMG EIV+QE+ KDPGKRSRLW PE IY+V   N+ 
Sbjct: 480 EVLLHKSLMTFGYRDQIEMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKG 539

Query: 480 TSLPTGINLDSLK--ELYLGG-----------------CSNL---KRFPEISCNIEDLDL 517
           T     I  D+ K  ++YL                   C+N+   +    +S  +  L  
Sbjct: 540 TDAVEVILFDTSKIGDVYLSSRSFESMINLRLLHIANECNNVHLQEGLEWLSDKLRYLHW 599

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
           +   +E LPS+      LV L +T+ S L+ +  R+  L +L  + L     L ++P ++
Sbjct: 600 ESFPLESLPSTFC-AQNLVQLSMTH-SKLRKLWDRIQKLDNLTIIKLDNSEDLIEIP-DL 656

Query: 578 GNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTS 636
               +L+ L+LA      ++  S+    KL +L L+ CK+++SL      + IH++    
Sbjct: 657 SRAPNLKILSLAYCVSLHQLHPSIFSAPKLRELCLKGCKKIESLV-----TDIHSKSLQR 711

Query: 637 LKTLSNSSTLL 647
           L  L++ S+L+
Sbjct: 712 LD-LTDCSSLV 721



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 76/189 (40%), Gaps = 53/189 (28%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SL T I+  SL+ L L  CS+L +F   S  ++ L L+ T I E  S +   S+L  LDL
Sbjct: 699 SLVTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKWLSLRGTTIHEFSSLMLRNSKLDYLDL 758

Query: 541 TNCSGLKSVSSRLCN---LKSLRRLNLSGCLK--------------------------LE 571
            +C  L  V  +L N   L+SL  LNLSGC +                          LE
Sbjct: 759 GDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDSARFLKYLNLRNCCNLE 818

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            LP+ I N                          L  L L  C  L SLP+LP     + 
Sbjct: 819 TLPDNIQN-----------------------CLMLRSLHLDGCINLNSLPKLPASLEELS 855

Query: 631 ARHCTSLKT 639
           A +CT L T
Sbjct: 856 AINCTYLDT 864


>gi|356560337|ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1289

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 273/749 (36%), Positives = 363/749 (48%), Gaps = 155/749 (20%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
           VFLSFRG D R  F  HL A+L R  I+TF DD  L RG  IS  L  AIEGS ++++I 
Sbjct: 23  VFLSFRGDDTRKGFTGHLFASLERRGIKTFKDDHDLQRGKLISVELMKAIEGSMLALIIL 82

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS--------------- 121
           S  YASS WCL+EL KILE K +    V P+F+ VDPSD  +                  
Sbjct: 83  SPNYASSTWCLDELKKILECKKE----VFPIFHGVDPSDVRHQRGSFAKAFSEHEEKFRE 138

Query: 122 ---------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                            + G       E+ LIE  V  I KK+    P    D LVG++S
Sbjct: 139 DKKKLERWRHALREVASYSGWDSKEQHEATLIETIVGHIQKKIIPRLPCCT-DNLVGIDS 197

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            +KE+ S +     +   +G+WG+GGIGKTTIA  +Y  I   F  S F++NIR+ S K 
Sbjct: 198 RMKEVYSLMGISLNDVRFIGLWGMGGIGKTTIARFVYEAIKGDFNVSCFLENIREVS-KT 256

Query: 227 GGLANI------HLNFER--------------RRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
            GL +I      HLN                   LS  K+L+V  D+++L Q++ L G+ 
Sbjct: 257 NGLVHIQKELLFHLNVRSSDFYNLHDGKNIIANSLSNKKILLVLDDVSELSQLENLAGKQ 316

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
           + F  GSRVIITTRD  LLK H    V    + K L+ N++L LF   AF Q+ P   +L
Sbjct: 317 EWFGSGSRVIITTRDKHLLKTHG---VHLTCKAKGLAQNEALKLFCLKAFKQDQPKEEYL 373

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
            L   V++YA G+PLAL+VLGS+L G + E W SA+ +++  PH  IQ  LK+SYD L  
Sbjct: 374 NLCKEVVEYARGLPLALEVLGSHLYGRTVEVWHSALEQIRSFPHSKIQDTLKISYDSLQP 433

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQ 445
             Q +FLD ACFFKG D   V N L  C +  +IGI  L+ + LVT+    K+ MHDLLQ
Sbjct: 434 PYQKMFLDIACFFKGMDIDEVKNILKNCGYHPEIGIDILIERCLVTLDRMKKLGMHDLLQ 493

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-------------------------- 479
           EMG  IV QES  DPGKRSRLW  +DI  VL +N                          
Sbjct: 494 EMGRNIVFQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIQGIVLNLVQPCDYEGRWSTE 553

Query: 480 ---------------TSLPTGINL--DSLKELYLGGCSNLKRFPEISC--NIEDLDLKET 520
                            LP G+N    SLK L+  GC  LK  P  +    + DL L  +
Sbjct: 554 AFSKTSQLKLLMLCDMQLPRGLNCLPSSLKVLHWRGCP-LKTLPLNNKLDEVVDLKLPHS 612

Query: 521 AIEELPSSIGNLSRLVDLDLT--------------------------------------- 541
            IE+L      L +L  ++L+                                       
Sbjct: 613 RIEQLWRGTKLLEKLKSINLSFSKNLKQSPDFGGAPNLESLVLEGCTSLTEVHPSLVRHK 672

Query: 542 --------NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
                   +C  LK++ S++  + SL+ LNLSGC + + LPE   ++E L  L+L     
Sbjct: 673 KLAMMNLKDCKRLKTLPSKM-EMSSLKDLNLSGCSEFKYLPEFGESMEHLSVLSLEGTAI 731

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            K+PSS+  L  L+ L L+NCK L  LP+
Sbjct: 732 AKLPSSLGCLVGLAHLYLKNCKNLVCLPD 760



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 3/139 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           +LP+ + + SLK+L L GCS  K  PE   ++E L    L+ TAI +LPSS+G L  L  
Sbjct: 687 TLPSKMEMSSLKDLNLSGCSEFKYLPEFGESMEHLSVLSLEGTAIAKLPSSLGCLVGLAH 746

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L NC  L  +     NL SL  LN+SGC KL  LPE +  ++SLE L+ +    +++P
Sbjct: 747 LYLKNCKNLVCLPDTFHNLNSLIVLNVSGCSKLGCLPEGLKEIKSLEELDASGTAIQELP 806

Query: 598 SSMKQLSKLSDLRLQNCKR 616
           SS+  L  L  +    CK+
Sbjct: 807 SSVFYLENLKSISFAGCKK 825



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 91/183 (49%), Gaps = 31/183 (16%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
           NL+SL  L + GCS L   PE    I   E+LD   TAI+ELPSS+  L  L  +    C
Sbjct: 764 NLNSLIVLNVSGCSKLGCLPEGLKEIKSLEELDASGTAIQELPSSVFYLENLKSISFAGC 823

Query: 544 -------------------------SGLKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEI 577
                                    +  +   S+L NL SL R+NLS C L  E  P+  
Sbjct: 824 KKPVSNSVSGFLLPFQWVFGNQQTPTAFRLPPSKL-NLPSLMRINLSYCNLSEESFPDGF 882

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTS 636
            +L SL++L+L   +F  +PS +  L+KL  L L  CK+L+ LPELP     + A +CTS
Sbjct: 883 RHLSSLQFLDLTGNNFVTLPSCISNLTKLEILLLNLCKKLKRLPELPSRMKHLDASNCTS 942

Query: 637 LKT 639
           L+T
Sbjct: 943 LET 945



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 73/125 (58%), Gaps = 4/125 (3%)

Query: 488  LDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            L+ LK + L    NLK+ P+   + N+E L L+  T++ E+  S+    + V ++L +C 
Sbjct: 1165 LEKLKSIDLSFSKNLKQSPDFDGAPNLESLVLEGCTSLTEVHPSLVRHKKPVMMNLEDCK 1224

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             LK++ S++  + SL+ L+LSGC + E LPE   ++E +  LNL E    K+PSS+  L 
Sbjct: 1225 RLKTLPSKM-EMSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKLPSSLGCLV 1283

Query: 605  KLSDL 609
             L+ L
Sbjct: 1284 GLAHL 1288



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLSRLVD 537
            +LP+ + + SLK L L GCS  +  PE   ++E    L+L+ET I +LPSS+G L  L  
Sbjct: 1228 TLPSKMEMSSLKYLSLSGCSEFEYLPEFGESMEQMSVLNLEETPITKLPSSLGCLVGLAH 1287

Query: 538  LD 539
            LD
Sbjct: 1288 LD 1289


>gi|224060459|ref|XP_002300210.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222847468|gb|EEE85015.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 524

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 227/513 (44%), Positives = 301/513 (58%), Gaps = 52/513 (10%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG++ R+ F +HL  ALC + I  FI DKL RG  I+  L   IE S+IS++I
Sbjct: 1   YDVFLSFRGQETRNTFTAHLYHALCNKGINAFIADKLERGEHITSQLYRVIEDSRISLLI 60

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-YCPSLGWMGIF------ 128
           FSE YA S +CL+ELVKILE K   GQ+V PVFY VDPSD      S G   +F      
Sbjct: 61  FSENYARSIYCLDELVKILECKESKGQVVFPVFYNVDPSDVEEQNGSFGEALLFHETYWG 120

Query: 129 ----------DIPTSESVLIEGNVND------ISKKLSDLFPSDNKDQL------VGVES 166
                     +  T  + L   ++N+      I + +  +    N   L      VG+ +
Sbjct: 121 IDTERVQKWREALTKAAQLSGWHLNNGNEAKFIWRIVEKVLSQLNHTSLHIAAYQVGLNN 180

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            I+EI   L + S     VG+ GIGG+GKTTI+ A+Y+ I++ FEGS F+ N+R+ S++ 
Sbjct: 181 HIEEINHMLNTRSDGVCMVGLCGIGGVGKTTISKAVYNLIANQFEGSCFLSNVREISKQH 240

Query: 227 G--------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
           G                    G  +  +N  R RL   KVLIV  D  +L Q+  L G  
Sbjct: 241 GLLRLQETLLYEILGDKNLVLGSVDRGINVIRDRLRNKKVLIVIDDADNLDQLKQLAGEP 300

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
           D F  GSRVIITTRD  LL  H   R+   ++VKEL  +D+L LFS NAF   HP+   L
Sbjct: 301 DWFGLGSRVIITTRDEHLLVAHGVERL---YKVKELCPDDALMLFSWNAFRNPHPSEDHL 357

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
           E+S   ++YA G+PLAL VLG++L G S  EWES +++LKR+P+  I +VLK+S+DGL+ 
Sbjct: 358 EVSLRAVRYAQGLPLALVVLGAFLYGRSIREWESELDRLKRIPNKQIYEVLKISFDGLEY 417

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQE 446
            E+ IFLD A FFKG ++  V+  LDAC  +  IGI  L+ KSL+ I NNKI MH+LLQ 
Sbjct: 418 HEKTIFLDIARFFKGQEKDYVIKILDACDVNPDIGIQVLIEKSLIYIENNKIQMHELLQS 477

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
           MG +IV QES   PG+RSRLW  ED+  VL EN
Sbjct: 478 MGRQIVHQESPNIPGRRSRLWFHEDVLHVLTEN 510


>gi|124359513|gb|ABN05946.1| TIR [Medicago truncatula]
          Length = 1230

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 267/704 (37%), Positives = 382/704 (54%), Gaps = 94/704 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           + +SSSS   +     DVF+SFRG D R  F SHLN AL +  ++TFIDD +L +G+EIS
Sbjct: 109 IGASSSSTLEVASNSFDVFISFRGDDTRRKFTSHLNEALKKSGLKTFIDDNELKKGDEIS 168

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
            +L  AIE S  SIVI SE YASS+WCLNELVKILE K   GQIV+P+FY +DPS   Y 
Sbjct: 169 SALIKAIEESCASIVILSENYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRYQ 228

Query: 119 CPSLG-------------------W---------MGIFDIPTS--ESVLIEGNVNDISKK 148
             S G                   W         +  +D   S  ES  I+  V D+ +K
Sbjct: 229 IGSYGQAFAKYEKNLRHKKDNLQKWKDALTEVSKLSGWDSKNSRIESDFIKDIVKDVLEK 288

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L+   P +   +LVG+E   +EIE    +GS +  T+G+WG+GGIGKT +A ++Y N  S
Sbjct: 289 LNHGRPFEANKELVGIEEKYEEIELLTNNGSNDVRTLGLWGMGGIGKTALAKSLYGNYCS 348

Query: 209 HFEGSYFMQNIRDESEKVG----------GLANIHLN---FE----RRRLSRMKVLIVFY 251
            FE   F++N+R+ES + G           L  + L+   FE    ++RL R K LIV  
Sbjct: 349 QFEYHCFLENVREESTRCGLNVVRKKLFSTLLKLGLDAPYFETPTFKKRLERAKCLIVLD 408

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+  L+Q + L     G   GSRVI+TTRD ++     G  V   +EVKEL+ ++SL LF
Sbjct: 409 DVATLEQAENLK---IGLGLGSRVIVTTRDRKICHQFEGFVV---YEVKELNEDESLQLF 462

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
             NAF + H   G+ ELS   I Y  G PLAL+VLG+  +  S+E  ES + K+K +P+ 
Sbjct: 463 CCNAFQEKHAKEGYEELSKSAIGYCRGNPLALKVLGANFRAKSKEACESELEKIKEIPYA 522

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFF---------KGNDQYLVMNFLDACRFSAKIGI 422
            I  VLK+S+  LD  +++IFLD ACFF          G  +Y++ +  +AC+F     I
Sbjct: 523 GIHDVLKLSFYDLDRTQRDIFLDIACFFYPKINHFYCYGRREYII-DLFNACKFYPATSI 581

Query: 423 SRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NEN 479
             L+ KSL+T    ++I MHDL+ EMG EIV+QE+ KDPGKRSRLW PE IY+V   N+ 
Sbjct: 582 EVLLHKSLMTFGYRDQIEMHDLVVEMGREIVKQEAPKDPGKRSRLWDPELIYEVFKYNKG 641

Query: 480 TSLPTGINLDSLK--ELYLGG-----------------CSNL---KRFPEISCNIEDLDL 517
           T     I  D+ K  ++YL                   C+N+   +    +S  +  L  
Sbjct: 642 TDAVEVILFDTSKIGDVYLSSRSFESMINLRLLHIANECNNVHLQEGLEWLSDKLRYLHW 701

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
           +   +E LPS+      LV L +T+ S L+ +  R+  L +L  + L     L ++P ++
Sbjct: 702 ESFPLESLPSTFC-AQNLVQLSMTH-SKLRKLWDRIQKLDNLTIIKLDNSEDLIEIP-DL 758

Query: 578 GNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
               +L+ L+LA      ++  S+    KL +L L+ CK+++SL
Sbjct: 759 SRAPNLKILSLAYCVSLHQLHPSIFSAPKLRELCLKGCKKIESL 802



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 76/189 (40%), Gaps = 53/189 (28%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SL T I+  SL+ L L  CS+L +F   S  ++ L L+ T I E  S +   S+L  LDL
Sbjct: 801 SLVTDIHSKSLQRLDLTDCSSLVQFCVTSEEMKWLSLRGTTIHEFSSLMLRNSKLDYLDL 860

Query: 541 TNCSGLKSVSSRLCN---LKSLRRLNLSGCLK--------------------------LE 571
            +C  L  V  +L N   L+SL  LNLSGC +                          LE
Sbjct: 861 GDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDSARFLKYLNLRNCCNLE 920

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            LP+ I N                          L  L L  C  L SLP+LP     + 
Sbjct: 921 TLPDNIQN-----------------------CLMLRSLHLDGCINLNSLPKLPASLEELS 957

Query: 631 ARHCTSLKT 639
           A +CT L T
Sbjct: 958 AINCTYLDT 966


>gi|147821370|emb|CAN67940.1| hypothetical protein VITISV_013693 [Vitis vinifera]
          Length = 1386

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 267/732 (36%), Positives = 374/732 (51%), Gaps = 118/732 (16%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VFLSFRG+D R+NF  HL   L    I+TF DD+L RG EI   L   IE S+ISIV+F
Sbjct: 21  EVFLSFRGEDTRNNFTDHLFVNLHGMGIKTFRDDQLERGEEIKSELLKTIEESRISIVVF 80

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSESV 136
           S+ YA S+WCL+EL KI+E + +  QIV PVFY +DP D          G F    S   
Sbjct: 81  SKNYAHSKWCLDELAKIMECREEMEQIVFPVFYHLDPCDVR-----KQTGSFGEAFS--- 132

Query: 137 LIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGS-------TEFNTVGIWG 189
           + E NV+  +KK+        +D L          E+  LSG         +   VGI+G
Sbjct: 133 IHERNVD--AKKVQRW-----RDSLT---------EASNLSGFHVNDGDLNDIRMVGIYG 176

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK--------------VGG---LANI 232
            GGIGKTTIA  +Y+ I   F G+ F+Q++R+   K              VG     +NI
Sbjct: 177 PGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKGYQLQLQQQLLHDTVGNDVEFSNI 236

Query: 233 H--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRG 290
           +  +N  + RL   KVLIV  D+  L+Q++ + G    F PGS +IITTRD  LL  + G
Sbjct: 237 NKGVNIIKSRLRSKKVLIVIDDVDRLQQLESVAGSPKWFGPGSTIIITTRDQHLLVEY-G 295

Query: 291 SRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL 350
             + H  +   L Y ++L LFS++AF QN P   +++LSN +++YA G+PLAL+V GS L
Sbjct: 296 VTISH--KATXLHYEEALQLFSQHAFKQNVPXEDYVDLSNCMVQYAQGLPLALKVXGSSL 353

Query: 351 KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF 410
           +GM+ +EW+SA +KLK+ P  +I  VL++S+DGLD  ++ +FLD ACFFKG  +  V   
Sbjct: 354 QGMTXDEWKSASDKLKKNPMKEINDVLRISFDGLDPSQKEVFLDIACFFKGECKDFVSRI 413

Query: 411 LDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE 470
           LD C   A   I  L  + LVTIS+N I MHDL+ EMG  IVR+E   DP K SRLW  +
Sbjct: 414 LDGCNLFATCNIRVLHDRCLVTISDNMIQMHDLIHEMGWAIVREECPGDPCKWSRLWDVD 473

Query: 471 DIYQVLNENTSLPT----GINLDSLKELYLGG--CSNLK--RFPEISCNIED-------- 514
           DIY   +    +       ++L   +E+       S +K  R  +I CN  D        
Sbjct: 474 DIYDAFSRQEEMQNIQTISLDLSRSREIQFNTKVFSKMKKLRLLKIYCNDHDGLTREKYK 533

Query: 515 -------------------------------------LDLKETAIEELPSSIGNLSRLVD 537
                                                ++LK + I++L      L  L  
Sbjct: 534 VLLPKDFQFPHDLRYLHWQRCTLTSLPWNFYGKHLIEINLKSSNIKQLWKGNKCLEELKG 593

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
           +DL+N   L  +  +  ++ +L RLNL GC  L +L   IG+L+SL YLNLA  +     
Sbjct: 594 IDLSNSKQLVKM-PKFSSMPNLERLNLEGCTSLCELHSSIGDLKSLTYLNLAGCEQLRSF 652

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
           PSSMK    L  L L  C  L+  PE    + C   ++    + ++ L +S   L     
Sbjct: 653 PSSMK-FESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNE-SGIQELPSSIVYLAS--- 707

Query: 653 HWDIFNFSNCSN 664
             ++ N SNCSN
Sbjct: 708 -LEVLNLSNCSN 718



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 11/177 (6%)

Query: 478  ENTS---LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIG 530
            ENT+   LP  I  L +L+ L L GCSNL+RFPEI  N+ +L    L ETAIE LP S+G
Sbjct: 903  ENTAIKELPNSIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVG 962

Query: 531  NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
            +L+RL  L+L NC  LKS+ + +C LKSL  L+L+GC  LE   E   ++E LE L L E
Sbjct: 963  HLTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRE 1022

Query: 591  KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
                ++PSS++ L  L  L L NC+ L +LP     L C +S+H R+C  L  L ++
Sbjct: 1023 TGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDN 1079



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 8/175 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S P+ +  +SL+ LYL  C NLK+FPEI  N+E   +L L E+ I+ELPSSI  L+ L  
Sbjct: 651 SFPSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEV 710

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L+NCS  +       N+K LR L L GC K E  P+    +  L  L+L +   +++P
Sbjct: 711 LNLSNCSNFEKFPXIHGNMKFLRELYLEGCPKFENFPDTFTYMGHLRRLHLRKSGIKELP 770

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLT 648
           SS+  L  L  L +  C + +  PE    + C  +++ R  T+++ L NS   LT
Sbjct: 771 SSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRX-TAIQELPNSIGSLT 824



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 97/190 (51%), Gaps = 31/190 (16%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLP  I  L SL+ L L GCSNL+ F EI+ ++E L+   L+ET I ELPSSI +L  L 
Sbjct: 980  SLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHLRGLK 1039

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES-------------- 582
             L+L NC  L ++ + + NL  L  L++  C KL  LP+ + +L+               
Sbjct: 1040 SLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLME 1099

Query: 583  ------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
                        L +LN++E     IP+ + QL KL  L + +C  L+ + ELP     I
Sbjct: 1100 EEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCKLRTLLINHCPMLEVIGELPSSLGWI 1159

Query: 630  HARHCTSLKT 639
             A  C SL+T
Sbjct: 1160 EAHGCPSLET 1169



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 27/169 (15%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           LP+ I  L+SL+ L +  CS  ++FPEI  N   +++L L+ TAI+ELP+SIG+L+ L  
Sbjct: 769 LPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRXTAIQELPNSIGSLTSLEI 828

Query: 538 LDLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           L L  C                       SG+K +   +  L+SL  LNLS C   EK P
Sbjct: 829 LSLEKCLKFEKFSDVFTNMGRLRELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFP 888

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           E  GN++ L+ L+L     +++P+S+ +L  L  L L  C  L+  PE+
Sbjct: 889 EIQGNMKCLKELSLENTAIKELPNSIGRLQALESLTLSGCSNLERFPEI 937


>gi|105922680|gb|ABF81430.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1282

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 254/737 (34%), Positives = 376/737 (51%), Gaps = 145/737 (19%)

Query: 22  FRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGY 80
           FRGKD R+NF SHL + L +  I+ F+DD+ L RG  I P+L  AIE S+ S++IFS  Y
Sbjct: 70  FRGKDTRNNFTSHLYSNLAQRGIDVFMDDRELERGKTIEPALWKAIEESRFSVIIFSRDY 129

Query: 81  ASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------------GY 118
           ASS WCL+ELVKI++   + G  V+PVFY VDPS+                         
Sbjct: 130 ASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSETYEKAFVEHEQNFKENLEKVRIWKD 189

Query: 119 CPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIES 173
           C S      GW  + +   SES+ I   V  IS KLS   P+ +K+ LVG++S ++ +  
Sbjct: 190 CLSTVTNLSGW-DVRNRNESESIKI--IVEYISYKLSITLPTISKN-LVGIDSRLEVLNG 245

Query: 174 QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH 233
            +     E   +GI G+GG+GKTT+A  +Y  I   FEGS F+ N+R+   +  G   + 
Sbjct: 246 YIGEEVGEAIFIGICGMGGLGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGPRRLQ 305

Query: 234 --------------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGS 273
                               +   +RR  R K+L+V  D+ D KQ++ L      F PGS
Sbjct: 306 EQLLSEILMERASVCDSSRGIEMIKRRSQRKKILVVLDDVDDHKQLESLAAESKWFGPGS 365

Query: 274 RVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVI 333
           R+IIT+RD Q+L  +    V  ++E ++L+ +D+L LFS+ AF  + PA  FL+LS  V+
Sbjct: 366 RIIITSRDKQVLTRNG---VARIYEAEKLNDDDALMLFSQKAFENDQPAEDFLDLSKQVV 422

Query: 334 KYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFL 393
            YANG+PLAL+V+GS+L G S  EW  A+N++  +P  +I KVL VS+DGL + E+ IFL
Sbjct: 423 GYANGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDHEIIKVLLVSFDGLHELEKKIFL 482

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVR 453
           D ACF KG     +   LD   F A IGI  L+ +SL+++S +++ MH+LLQ+MG EI+R
Sbjct: 483 DIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISVSRDQVWMHNLLQKMGKEIIR 542

Query: 454 QESIKD---------------------------------PGKRSRLWH------------ 468
           +ES ++                                 PG +   W+            
Sbjct: 543 RESPEEPGRRSRLWTYKDVCLALMDNIGKEKIEAIFLDMPGIKEAQWNMEAFSKMSRLRL 602

Query: 469 -----------PEDIYQVLN-------ENTSLPTGINLDSLKELYLG---------GCS- 500
                      PED+   L         + SLP  + +D L EL++          GC  
Sbjct: 603 LKINNVQLSEGPEDLSNKLRFLEWHSYPSKSLPASLQVDELVELHMANSSIEQLWYGCKS 662

Query: 501 -------------NLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
                        NL + P ++   N+E L L+  T++ E+  S+    +L  ++L NC 
Sbjct: 663 AINLKIINLSNSLNLSKTPNLTGIPNLESLILEGCTSLSEVHPSLALHKKLQHVNLVNCK 722

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            ++ + + L  ++SL+   L GC KLEK P+ IGN+  L  L L E    K+PSS+  L 
Sbjct: 723 SIRILPNNL-EMESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLI 781

Query: 605 KLSDLRLQNCKRLQSLP 621
            L  L + +CK L+S+P
Sbjct: 782 GLGLLSMNSCKNLESIP 798



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 71/106 (66%), Gaps = 3/106 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SLK   L GCS L++FP+I  N+     L L ET+I +LPSSI +L  L  L
Sbjct: 727 LPNNLEMESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLL 786

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE
Sbjct: 787 SMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCIPENLGKVESLE 832


>gi|37781226|gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 258/699 (36%), Positives = 374/699 (53%), Gaps = 98/699 (14%)

Query: 9   NMIPHP-----KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
           +++P P      +DVFLSFRG+DVR  FV HL  AL ++ I TF DD KL +G  ISP L
Sbjct: 6   SLLPSPDIIRWSYDVFLSFRGEDVRKTFVDHLYLALEQKCINTFKDDEKLEKGKFISPEL 65

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL 122
            S+IE S+I+++IFS+ YA+S WCL+EL KI+E KN  GQIVVPVFY VDPS      S+
Sbjct: 66  VSSIEESRIALIIFSKNYANSTWCLDELTKIMECKNVKGQIVVPVFYDVDPSTVRKQKSI 125

Query: 123 ------------------GWMGI---------FDIPTS----ESVLIEGNVNDISKKLSD 151
                              W            +D+P +    E+ ++E    DI  +L  
Sbjct: 126 FGEAFSKHEARFQEDKVQKWRAALEEAANISGWDLPNTANGHEARVMEKIAEDIMARLGS 185

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
              + N   LVG+ES + ++   L  GS   + +GI G+ G+GKTT+A  IY NI S F+
Sbjct: 186 QRHASNARNLVGMESHMHKVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQ 245

Query: 212 GSYFMQNIRDESEKVG--GLANIHL------------------NFERRRLSRMKVLIVFY 251
           G+ F+  +RD S K G   L  I L                  N +++RL   KVL+V  
Sbjct: 246 GACFLHEVRDRSAKQGLERLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLD 305

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+  + Q++ L G  + F  GSR+IITT+D  LL  +   ++   + +K L+  +SL LF
Sbjct: 306 DVDHIDQLNALAGEREWFGDGSRIIITTKDKHLLVKYETEKI---YRMKTLNNYESLQLF 362

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
            ++AF +N P   F +LS  VIK+ +G+PLAL+VLGS+L G   +EW S V +LK++P  
Sbjct: 363 KQHAFKKNRPTKEFEDLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPEN 422

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           +I K L+ S+ GL + EQ IFLD ACFF G  +  V   L++  F   IGI  L+ K L+
Sbjct: 423 EILKKLEQSFTGLHNTEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLI 482

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGIN 487
           TI   +IT+H L+Q+MG  IVR+E+  DP   SR+W  EDI  VL  N          ++
Sbjct: 483 TILQGRITIHQLIQDMGWHIVRREATDDPRMCSRMWKREDICPVLERNLGTDKNEGMSLH 542

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL------DLT 541
           L + +E+  GG    K F +++  +  L  +   + + P  + +  R +D        L 
Sbjct: 543 LTNEEEVNFGG----KAFMQMT-RLRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLP 597

Query: 542 NC------SGLKSVSSRLC-------NLKSLRRLNLSGCLKLEKLPE--EIGNLESL--- 583
           N        GLK   SR+        +L  L+ +NLS   KL + P+     NLE L   
Sbjct: 598 NSFKGDQLVGLKLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLE 657

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           E  +L E +F     S++ L KL  L L+NC+ L++LP+
Sbjct: 658 ECTSLVEINF-----SIENLGKLVLLNLKNCRNLKTLPK 691



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 5/141 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI----SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           +LP  I L+ L+ L L GCS L+ FPEI    +C + +L L  T++ ELP+S+ NLS + 
Sbjct: 688 TLPKRIRLEKLEILVLTGCSKLRTFPEIEEKMNC-LAELYLGATSLSELPASVENLSGVG 746

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            ++L+ C  L+S+ S +  LK L+ L++SGC KL+ LP+++G L  LE L+      + I
Sbjct: 747 VINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTI 806

Query: 597 PSSMKQLSKLSDLRLQNCKRL 617
           PSSM  L  L  L L  C  L
Sbjct: 807 PSSMSLLKNLKHLSLSGCNAL 827



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 8/166 (4%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDL 540
           T  +L  LK + L     L R P+ S   N+E L L+E T++ E+  SI NL +LV L+L
Sbjct: 621 TSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLVEINFSIENLGKLVLLNL 680

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK++  R+  L+ L  L L+GC KL   PE    +  L  L L      ++P+S+
Sbjct: 681 KNCRNLKTLPKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELYLGATSLSELPASV 739

Query: 601 KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSN 642
           + LS +  + L  CK L+SLP     L C  ++    C+ LK L +
Sbjct: 740 ENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPD 785



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 93/181 (51%), Gaps = 21/181 (11%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L  LK L + GCS LK  P+   +   +E+L    TAI+ +PSS+  L  L 
Sbjct: 758 SLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLK 817

Query: 537 DLDLTNCSGL-----------KSVSSRLCNLK---SLRRLNLSGC-LKLEKLPEEIGNLE 581
            L L+ C+ L           KS+     NL    SL  L+LS C +    +   +G L 
Sbjct: 818 HLSLSGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILNNLGFLS 877

Query: 582 SLEYLNLAEKDFEKIPS-SMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
           SLE L L   +F  IP+ S+ + ++L  L+L  C RL+SLPELP     I A  CTSL +
Sbjct: 878 SLEILILNGNNFSNIPAASISRFTRLKRLKLHGCGRLESLPELPPSIKGIFANECTSLMS 937

Query: 640 L 640
           +
Sbjct: 938 I 938


>gi|82542043|gb|ABB82029.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1147

 Score =  368 bits (945), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 260/721 (36%), Positives = 377/721 (52%), Gaps = 130/721 (18%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRGKD R  F  HL  AL +  I TF DD +L RG EI   L  AI+ SK
Sbjct: 11  PEGTYDVFLSFRGKDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEIHDHLLRAIQESK 70

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
           ISIV+FS+GYASSRWCLNELV+IL+ KN K GQIV P+FY +DPSD       +  +   
Sbjct: 71  ISIVVFSKGYASSRWCLNELVEILKCKNRKTGQIVQPIFYNIDPSDVRKQNGSFAKAFVK 130

Query: 123 ------------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDN 157
                                   GW  + D+    E+  I+  + D+  KL   +    
Sbjct: 131 HEERFEEKLVKEWRKALEEAGNLSGW-NLNDMANGHEAKFIKEIIKDVLNKLDPKYLY-V 188

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
            + LVG++ +   I   L + + +   VGI G+ GIGKTTIA  +++ +   FE S F+ 
Sbjct: 189 PEHLVGIDRLAHNIIDFLSTATDDVLIVGIHGMPGIGKTTIARVVFNQLCYGFEESCFLS 248

Query: 218 NIRDESEKVGGLANI-----HLNFE----------------RRRLSRMKVLIVFYDLTDL 256
           NI + S++  GL  +     H  F+                + RL R +VL+V  D+   
Sbjct: 249 NINETSKQFNGLVPLQKQLLHDIFKQDAANINCVDRGKVLIKERLCRQRVLVVADDVARQ 308

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q++ L+G    F PGSRVIITTRD  +L      +    ++++EL  ++SL LFS +A 
Sbjct: 309 DQLNALMGERSWFGPGSRVIITTRDSSVL-----LKADQTYQIEELKPDESLQLFSWHAL 363

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
               PA  ++ELS  V+ Y  G+PLAL+V+G+ L G + + W+S ++KL+R+P+ DIQ  
Sbjct: 364 RDTEPAEDYIELSKDVVDYCGGLPLALEVMGACLSGKNRDGWKSVIDKLRRIPNHDIQGK 423

Query: 377 LKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTIS 434
           LK+SYD LD EE QN FLD ACFF    +  V   L A C ++ ++ +  L G+SL+ ++
Sbjct: 424 LKISYDSLDGEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRGRSLIKVN 483

Query: 435 N-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL----------------- 476
              KITMHDLL++MG E+VR+ S K+PGKR+R+W+ ED + VL                 
Sbjct: 484 AIGKITMHDLLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVK 543

Query: 477 -NENTSLPTG-------INLDSLKELYLGGC---------------SNLKRFPEISC--N 511
            +E  SL TG       +NL  +  ++L G                  LK FP      N
Sbjct: 544 ASEAKSLSTGSFAKMKRLNLLQINGVHLTGSFKLLSRELMLICWLQCPLKYFPSDFTFDN 603

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTN----------------------CSGLKSV 549
           ++ LD++ + +++L      L+RL  ++L++                      CS L  V
Sbjct: 604 LDVLDMQYSNLKKLWKGKKILNRLKIINLSHSQNLIKTPNLHSSSLKKLKLKGCSSLVEV 663

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSD 608
              + NL SL  LNL GC +L+ LPE I N++SL+ LN++     EK+P  M  +  L +
Sbjct: 664 HQSIGNLTSLIFLNLEGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGDMESLIE 723

Query: 609 L 609
           L
Sbjct: 724 L 724



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 63/102 (61%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           +++ E+  SIGNL+ L+ L+L  C  LK +   + N+KSL+RLN+SGC +LEKLPE +G+
Sbjct: 658 SSLVEVHQSIGNLTSLIFLNLEGCWRLKILPESIVNVKSLKRLNISGCSQLEKLPERMGD 717

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +ESL  L     + ++  SS+ QL  +  L L+     Q  P
Sbjct: 718 MESLIELLADGIENKQFLSSIGQLKYVRRLSLRGYNFSQDSP 759


>gi|37781280|gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 259/699 (37%), Positives = 375/699 (53%), Gaps = 98/699 (14%)

Query: 9   NMIPHPK-----HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
           +++P P+     +DVFLSFRG+DVR  FV HL  AL ++ I TF DD KL +G  ISP L
Sbjct: 6   SLLPSPEIIRWSYDVFLSFRGEDVRKTFVDHLYLALQQKCINTFKDDEKLEKGKFISPEL 65

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL 122
            S+IE S+I+++IFS+ YA+S WCL+EL KI+E KN  GQIVVPVFY VDPS      S+
Sbjct: 66  MSSIEESRIALIIFSKNYANSTWCLDELTKIMECKNVKGQIVVPVFYDVDPSTVRKQKSI 125

Query: 123 ------------------GWMGI---------FDIPTS----ESVLIEGNVNDISKKLSD 151
                              W            +D+P +    E+ ++E    DI  +L  
Sbjct: 126 FGEAFSKHEARFQEDKVQKWRAALEEAANISGWDLPNTSNGHEARVMEKIAEDIMARLGS 185

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
              + N   LVG+ES + ++   L  GS   + +GI G+ G+GKTT+A  IY NI S F+
Sbjct: 186 QRHASNARNLVGMESHMLKVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQ 245

Query: 212 GSYFMQNIRDESEKVG--GLANIHL------------------NFERRRLSRMKVLIVFY 251
           G+ F+  +RD S K G   L  I L                  N +++RL   KVL+V  
Sbjct: 246 GACFLHEVRDRSAKQGLERLQEILLSEILVVKKLRINNSFEGANMQKQRLQYKKVLLVLD 305

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+  + Q++ L G  + F  GSR+IITT+D  LL  +   ++   + +K L+  +SL LF
Sbjct: 306 DVDHIDQLNALAGEREWFGDGSRIIITTKDKHLLVKYETEKI---YRMKTLNNYESLQLF 362

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
            ++AF +N P   F +LS  VIK+ +G+PLAL+VLGS+L G   +EW S V +LK++P  
Sbjct: 363 KQHAFKKNRPTKEFEDLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPEN 422

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           +I K L+ S+ GL + EQ IFLD ACFF G  +  V   L++  F   IGI  L+ K L+
Sbjct: 423 EILKKLEQSFTGLHNTEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLI 482

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGIN 487
           TI   +IT+H L+Q+MG  IVR+E+  DP   SRLW  EDI  VL  N          ++
Sbjct: 483 TILQGRITIHQLIQDMGWHIVRREATDDPRMCSRLWKREDICPVLERNLGTDKNEGMSLH 542

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL------DLT 541
           L + +E+  GG    K F +++  +  L  +   + + P  + +  R +D        L 
Sbjct: 543 LTNEEEVNFGG----KAFMQMT-RLRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLP 597

Query: 542 N------CSGLKSVSSRLC-------NLKSLRRLNLSGCLKLEKLPE--EIGNLESL--- 583
           N        GLK   SR+        +L  L+ +NLS   KL + P+     NLE L   
Sbjct: 598 NSFKGDQLVGLKLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLE 657

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           E  +L E +F     S++ L KL  L L+NC+ L++LP+
Sbjct: 658 ECTSLVEINF-----SIENLGKLVLLNLKNCRNLKTLPK 691



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 5/141 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI----SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           +LP  I L+ L+ L L GCS L+ FPEI    +C + +L L  T++  LP+S+ NLS + 
Sbjct: 688 TLPKRIRLEKLEILVLTGCSKLRTFPEIEEKMNC-LAELYLGATSLSGLPASVENLSGVG 746

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            ++L+ C  L+S+ S +  LK L+ L++SGC KL+ LP+++G L  LE L+        I
Sbjct: 747 VINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEKLHCTHTAIHTI 806

Query: 597 PSSMKQLSKLSDLRLQNCKRL 617
           PSSM  L  L  L L+ C  L
Sbjct: 807 PSSMSLLKNLKRLSLRGCNAL 827



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 26/203 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L  LK L + GCS LK  P+   +   +E L    TAI  +PSS+  L  L 
Sbjct: 758 SLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEKLHCTHTAIHTIPSSMSLLKNLK 817

Query: 537 DLDLTNCSGL-----------KSVSSRLCNLK---SLRRLNLSGC-LKLEKLPEEIGNLE 581
            L L  C+ L           KS+     NL    SL RL+LS C +    +   +G L 
Sbjct: 818 RLSLRGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIRLDLSDCDISDGGILRNLGFLS 877

Query: 582 SLEYLNLAEKDFEKIPS-SMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
           SL+ L L   +F  IP+ S+ +L++L  L L+ C RL+SLPELP   + I+A  CTSL +
Sbjct: 878 SLKVLLLDGNNFSNIPAASISRLTRLKSLALRGCGRLESLPELPPSITGIYAHDCTSLMS 937

Query: 640 LSNSSTLLTRSSKHWDIFNFSNC 662
           +      LT+     D+ +F NC
Sbjct: 938 IDQ----LTKYPMLSDV-SFRNC 955



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDL 540
           T  +L  LK + L     L R P+ S   N+E L L+E T++ E+  SI NL +LV L+L
Sbjct: 621 TSKDLGKLKYMNLSHSQKLIRTPDFSVTPNLERLVLEECTSLVEINFSIENLGKLVLLNL 680

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK++  R+  L+ L  L L+GC KL   PE    +  L  L L       +P+S+
Sbjct: 681 KNCRNLKTLPKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELYLGATSLSGLPASV 739

Query: 601 KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLT 648
           + LS +  + L  CK L+SLP     L C  ++    C+ LK L +   LL 
Sbjct: 740 ENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLV 791


>gi|37781356|gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 259/696 (37%), Positives = 375/696 (53%), Gaps = 92/696 (13%)

Query: 9   NMIPHPK-----HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
           +++P P+     +DVFLSFRG+DVR  FV HL  AL ++ I TF DD KL +G  ISP L
Sbjct: 6   SLLPSPEIIRWSYDVFLSFRGEDVRKTFVDHLYLALQQKCINTFKDDEKLEKGKFISPEL 65

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL 122
            S+IE S+I+++IFS+ YA+S WCL+EL KI+E KN  GQIVVPVFY VDPS      S+
Sbjct: 66  VSSIEESRIALIIFSKNYANSTWCLDELTKIMECKNVKGQIVVPVFYDVDPSTVRKQKSI 125

Query: 123 ------------------GWMGI---------FDIPTS----ESVLIEGNVNDISKKLSD 151
                              W            +D+P +    E+ ++E    DI  +L  
Sbjct: 126 FGEAFSKHEARFQEDKVQKWRAALEEAANISGWDLPNTSNGHEARVMEKIAEDIMARLGS 185

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
              + N   LVG+ES + ++   L  GS   + +GI G+ G+GKTT+A  IY NI S F+
Sbjct: 186 QRHASNARNLVGMESHMHQVYKMLGIGSGGVHFLGILGMSGVGKTTLARVIYDNIRSQFQ 245

Query: 212 GSYFMQNIRDESEKVG--GLANIHL------------------NFERRRLSRMKVLIVFY 251
           G+ F+  +RD S K G   L  I L                  N +++RL   KVL+V  
Sbjct: 246 GACFLHEVRDRSAKQGLERLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLD 305

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+  + Q++ L G  + F  GSR+IITT+D  LL  +   ++   + +K L+  +SL LF
Sbjct: 306 DVDHIDQLNALAGEREWFGDGSRIIITTKDKHLLVKYETEKI---YRMKTLNNYESLQLF 362

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
            ++AF +N P   F +LS  VIK+ +G+PLAL+VLGS+L G   +EW S V +LK++P  
Sbjct: 363 KQHAFKKNRPTKEFEDLSAQVIKHTDGLPLALKVLGSFLYGRGLDEWISEVERLKQIPEN 422

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           +I K L+ S+ GL + EQ IFLD ACFF G  +  V   L++  F   IGI  L+ K L+
Sbjct: 423 EILKKLEQSFTGLHNTEQKIFLDIACFFSGKKKDSVTRILESFHFCPVIGIKVLMEKCLI 482

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGIN 487
           T    +IT+H L+Q+MG  IVR+E+  DP   SRLW  EDI  VL  N          ++
Sbjct: 483 TTLQGRITIHQLIQDMGWHIVRREATDDPRMCSRLWKREDICPVLERNLGTDKIEGMSLH 542

Query: 488 LDSLKELYLGGCSNLK----RF-----------PE-ISCNIEDLDLKETAIEELPSSIGN 531
           L + +E+  GG + ++    RF           PE +   +  LD      + LP+S   
Sbjct: 543 LTNEEEVNFGGKAFMQMTRLRFLKFQNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSFKG 602

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESL---EYL 586
             +LV L L   S +  +     +L  L+ +NLS   KL ++P+     NLE L   E  
Sbjct: 603 -DQLVSLKLKK-SRIIQLWKTSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECT 660

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +L E +F     S++ L KL  L L+NC+ L++LP+
Sbjct: 661 SLVEINF-----SIENLGKLVLLNLKNCRNLKTLPK 691



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 5/141 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI----SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           +LP  I L+ L+ L L GCS L+ FPEI    +C + +L L  T++ ELP+S+ NLS + 
Sbjct: 688 TLPKRIRLEKLEILVLTGCSKLRTFPEIEEKMNC-LAELYLDATSLSELPASVENLSGVG 746

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            ++L+ C  L+S+ S +  LK L+ L++SGC KL+ LP+++G L  LE L+      + I
Sbjct: 747 VINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEQLHCTHTAIQTI 806

Query: 597 PSSMKQLSKLSDLRLQNCKRL 617
           PSSM  L  L  L L  C  L
Sbjct: 807 PSSMSLLKNLKRLSLSGCNAL 827



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDL 540
           T  +L  LK + L     L R P+ S   N+E L L+E T++ E+  SI NL +LV L+L
Sbjct: 621 TSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLVEINFSIENLGKLVLLNL 680

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK++  R+  L+ L  L L+GC KL   PE    +  L  L L      ++P+S+
Sbjct: 681 KNCRNLKTLPKRI-RLEKLEILVLTGCSKLRTFPEIEEKMNCLAELYLDATSLSELPASV 739

Query: 601 KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLT 648
           + LS +  + L  CK L+SLP     L C  ++    C+ LK L +   LL 
Sbjct: 740 ENLSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLV 791



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 21/181 (11%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L  LK L + GCS LK  P+   +   +E L    TAI+ +PSS+  L  L 
Sbjct: 758 SLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEQLHCTHTAIQTIPSSMSLLKNLK 817

Query: 537 DLDLTNCSGL-----------KSVSSRLCNLK---SLRRLNLSGC-LKLEKLPEEIGNLE 581
            L L+ C+ L           KS+     NL    SL  L+LS C +    +   +G L 
Sbjct: 818 RLSLSGCNALSSQVSSSSHGQKSMGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLP 877

Query: 582 SLEYLNLAEKDFEKIPS-SMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
           SLE L L   +F  IP+ S+ +L++L  L+L  C RL+SLPELP     I+A  CTSL +
Sbjct: 878 SLERLILDGNNFSNIPAASISRLTRLKTLKLLGCGRLESLPELPPSIKGIYANECTSLMS 937

Query: 640 L 640
           +
Sbjct: 938 I 938


>gi|255567754|ref|XP_002524855.1| ATP binding protein, putative [Ricinus communis]
 gi|223535818|gb|EEF37479.1| ATP binding protein, putative [Ricinus communis]
          Length = 673

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 265/666 (39%), Positives = 365/666 (54%), Gaps = 91/666 (13%)

Query: 3   SSSSSINMIPHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           S S S    PH   +DVFLSFRG+D R NF  HL  AL +  I  F DDK L+RGN IS 
Sbjct: 9   SPSFSYCRRPHQWSYDVFLSFRGEDTRKNFTDHLYNALLQAGIHAFRDDKHLSRGNHISS 68

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
            L  AI+ SK+SIV+FS+GYASSRWCL+ELVKI++ KN  GQIVVP+FY V PSD     
Sbjct: 69  ELLKAIQESKVSIVVFSKGYASSRWCLDELVKIMQCKNTAGQIVVPIFYDVSPSDVRKQT 128

Query: 116 AGYCPSLGWMGIFD----IPTSESVLIEG---------NV------NDISKKLSDLFPSD 156
             +  +L     F     +    + L+E          NV       +I K + D+    
Sbjct: 129 GSFAEALQRHEQFSEREKVNDWRNALLEAANLSGWDLQNVANGHESKNIRKVVEDVLSKL 188

Query: 157 NKDQL------VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
           +++ L      VG++S IK++   L  G+ +   +GI G+GGIGKTTIA A+++ +   F
Sbjct: 189 SRNCLNVAKHPVGIDSRIKDVIVLLSVGTKDVRMIGIHGMGGIGKTTIAKAVFNQLCDGF 248

Query: 211 EGSYFMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIV 249
           E   F+ N+++ SE+  GL  +                      +N  R R    ++L+V
Sbjct: 249 EVRCFLSNVKEISEQPNGLIQLQEQLLRAVLKPKSLQIGSVDRGINMIRERFRHKRLLVV 308

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             DL  +KQ + L+G    F  GSR+IIT+RD  LL       V   ++VKEL +N+SL 
Sbjct: 309 IDDLDHMKQFNALMGDRTWFGLGSRLIITSRDEHLLAQ---LEVDEKYQVKELDHNESLE 365

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS +AF + HP   ++ELSN V+ Y  G+PLAL+VLGSYL   S  EW SA+ KLKR+P
Sbjct: 366 LFSWHAFRKTHPVGDYVELSNGVVDYGGGLPLALEVLGSYLCKRSIPEWTSALRKLKRIP 425

Query: 370 HMDIQKVLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
           H  IQ+ L++S+D LDD++ ++IFLD ACFF G D+   +  LD C F  +IGIS L+ +
Sbjct: 426 HHQIQRKLRLSFDTLDDDKVKDIFLDIACFFIGTDRDYAVKILDGCGFFPEIGISVLIQR 485

Query: 429 SLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTG 485
           SLVT+ S NK++MHDLL++MG EIVR+ S   PGKRSRLW  ED+  VL+  + T    G
Sbjct: 486 SLVTVDSKNKLSMHDLLRDMGREIVRELSPNQPGKRSRLWFQEDVLDVLSNQKGTEAVEG 545

Query: 486 INLD-----------------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAI 522
           + LD                        + +++L GC     +  +S  +  L      +
Sbjct: 546 LVLDVESSRDAVLSTESFANMRYLRLLKINKVHLTGC-----YEHLSKELRWLCWHSCPL 600

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
           + LP +   L  LV LD+   S +K V   +  L  L+ LNLS    L K P     L S
Sbjct: 601 KFLPHNF-QLDNLVILDM-QYSNIKEVWKEIRVLNKLQILNLSHSEYLAKTP-NFTCLTS 657

Query: 583 LEYLNL 588
           LE L L
Sbjct: 658 LERLEL 663


>gi|356558197|ref|XP_003547394.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1122

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 284/831 (34%), Positives = 393/831 (47%), Gaps = 183/831 (22%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEG 68
           N  P  K+DVF+SFRGKDVR NF+SHL+    R KI  F+DDKL +G+EI  SL  AIE 
Sbjct: 87  NKAPQTKYDVFVSFRGKDVRGNFLSHLDEIFKRNKIYAFVDDKLKKGDEIWSSLVEAIEQ 146

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSLG 123
           S I ++IFS+ YASSRWCL EL  ILE   KYG+IV+PVFY V+P+D       Y  +  
Sbjct: 147 SFILLIIFSQSYASSRWCLKELEAILECNKKYGRIVIPVFYHVEPADVRHQRGSYKNAFK 206

Query: 124 ------------W-------MGIFDIPTS----ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                       W         I  I TS    E  L++  V  + K+L       N   
Sbjct: 207 KHEKRNKTKVQIWRHALKKSANIVGIETSKIRNEVELLQEIVRLVLKRLGK--SPINSKI 264

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           L+G++  I  +ES +         +GIWG+ G GKTT+A  ++  + S ++G YF+ N R
Sbjct: 265 LIGIDEKIAYVESLIRKEPKVTCLIGIWGMAGNGKTTLAEEVFKKLQSEYDGCYFLANER 324

Query: 221 DESEKVG----------GL---------ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           ++S + G          GL          N+ L    RR+ RMKVLIV  D+ D   ++ 
Sbjct: 325 EQSSRHGIDSLKKEIFSGLLENVVTIDDPNVSLIDIDRRIGRMKVLIVLDDVNDPDHLEK 384

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G  D F  GSR+IITTR VQ+L     ++   ++++ E S + +L LF+  AF Q+  
Sbjct: 385 LLGTPDNFGSGSRIIITTRYVQVLN---ANKANEIYQLGEFSLDKALELFNLIAFKQSDH 441

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              + ELS  V+ YA G PL L+VL   L G  +EEWE  ++ LKRMP  D+ KV+K+SY
Sbjct: 442 QWEYNELSKKVVDYAKGNPLVLKVLAQLLCGKDKEEWEGMLDSLKRMPPADVYKVMKLSY 501

Query: 382 DGLDDEEQNIFLDTACFF-KGNDQYLVMNFL-----DACRFSAKIGISRLVGKSLVTIS- 434
           D LD +EQ IFLD ACFF + N    V N       +  + +    + RL  ++L+T S 
Sbjct: 502 DVLDRKEQQIFLDLACFFLRTNTMVNVSNLKSLLKGNESQETVTFRLGRLKDQALITYSD 561

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG----INLDS 490
           +N I MHD LQEM  EIVR+ES +DPG RSRLW P DI++    + S        I+L +
Sbjct: 562 DNVIAMHDSLQEMAMEIVRRESSEDPGSRSRLWDPNDIFEASKNDKSTKAIRSILIHLPT 621

Query: 491 LKELYLG----GCSNLKRFPEISCNIED-------------------------------- 514
             +  LG    G  N  +F EIS   E+                                
Sbjct: 622 FMKQELGPHIFGKMNRLQFLEISGKCEEDSFDEQNILAKWLQFSANELRFLCWYHYPLKS 681

Query: 515 ------------LDLKETAIEELPSSIGNLSRLVDLDLTN-------------------- 542
                       L L +  I+ L   + NL  L +L LT+                    
Sbjct: 682 LPENFSAEKLVILKLPKGEIKYLWHGVKNLVNLKELHLTDSKMLEELPDLSNATNLEVLV 741

Query: 543 ---CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE--------- 590
              CS L +V   + +L  L +LNL  C  L  L     +L SL YLNL +         
Sbjct: 742 LEGCSMLTTVHPSIFSLGKLEKLNLQDCTSLTTLASN-SHLCSLSYLNLDKCEKLRKLSL 800

Query: 591 ---------------KDF--------------------EKIPSSMKQLSKLSDLRLQNCK 615
                          K F                    +K+PSS+K L +LS L +  C 
Sbjct: 801 ITENIKELRLRWTKVKAFSFTFGDESKLQLLLLEGSVIKKLPSSIKDLMQLSHLNVSYCS 860

Query: 616 RLQSLPELPCGSSI----HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           +LQ +P+LP    I    +++ CTSLKT+   ST   +  ++     F NC
Sbjct: 861 KLQEIPKLPPSLKILDARYSQDCTSLKTVVFPSTATEQLKENRKEVLFWNC 911


>gi|147802252|emb|CAN68265.1| hypothetical protein VITISV_020931 [Vitis vinifera]
          Length = 1441

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 257/719 (35%), Positives = 376/719 (52%), Gaps = 107/719 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK--LNRGNEI 58
           M S SS+ N  P   HDVFLSFRG D R+NF  HL  AL +  I TF DD   + RG EI
Sbjct: 23  MVSYSSTSN--PRWSHDVFLSFRGADTRYNFTDHLYTALVQRGINTFKDDDNLIRRGEEI 80

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD--- 115
           +P L  A+E S+  IV+ S+ YA SRWCL+EL  I+E + ++GQ+V P+FY VDPSD   
Sbjct: 81  APKLLKAVEESRSCIVVLSKTYADSRWCLDELATIMERRREFGQLVFPIFYHVDPSDVRN 140

Query: 116 ------------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLS- 150
                                   A         G   +   ES LI+  ++ I K+L+ 
Sbjct: 141 QSGSFGKAFANYEENWKDKVERWRAALTEVANLSGWHLLQGYESKLIKEIIDHIVKRLNP 200

Query: 151 DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
            L P +  +Q+VG++  +KE++S L     +   VGI+G  GIGKTT+A  +Y++I   F
Sbjct: 201 KLLPVE--EQIVGMDFRLKELKSLLNVHLDDIRMVGIYGPSGIGKTTMAKMVYNDILCQF 258

Query: 211 EGSYFMQNIRDESE-----------KVGG---LANIH--LNFERRRLSRMKVLIVFYDLT 254
            G  F+++++  S             VG    L NI+  +N  + RL   KV +V  D+ 
Sbjct: 259 NGGIFLEDVKSRSRFQLLQDLLRGILVGENVELNNINDGINKIKGRLGSKKVFVVIDDVD 318

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           D +Q+  L+     F  GSR+I+TTR   LL  +    V   +E K L   D++ LFS +
Sbjct: 319 DSEQVKSLVKSCKWFGLGSRIILTTRYKHLLDVYG---VDESYEAKVLCNEDAIQLFSWH 375

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF QN P   ++++SN+++ Y  G+PLA++VLGS+L GM+ +EW+S + KL +    +I 
Sbjct: 376 AFKQNTPKEDYVDMSNLMVNYVQGLPLAIKVLGSFLYGMTIDEWKSTLGKLTK-EDQEIY 434

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            VLK+ YDGLDD E+ I LD ACFFKG D+  V+  L +C F A+IG+  L  + L++IS
Sbjct: 435 NVLKICYDGLDDNEKEILLDIACFFKGEDKDFVLRILKSCDFYAEIGVRVLCDRCLISIS 494

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI-YQVLNENTS------------ 481
           NN+I+MHDL+Q+MG  +VR++S +DP K SRLW P++I +  L E  S            
Sbjct: 495 NNRISMHDLIQQMGWTVVREKSPEDPSKWSRLWDPDNIRHAFLGEKGSKNIEVISCDLSR 554

Query: 482 --------------------------------LPTGINLDS--LKELYLGGCSNLKRFPE 507
                                           LP      S  L+ L+  G   LK  P 
Sbjct: 555 SKEIQCNTKVFTKMKRLRLLKLHWSDHCGKVVLPPNFEFPSQELRYLHWEGYP-LKTLPS 613

Query: 508 --ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
                N+ +L L+++ I++L      L +L  +DL+    L  +  +   +  L  LNL 
Sbjct: 614 NFHGENLVELHLRKSTIKQLWKRSKGLEKLKVIDLSYSKVLTKM-PKFSRMPKLEILNLE 672

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           GC+ L KL   IG+++ L YLNL   +  + +PSSMK    L  L L  C+   + PE+
Sbjct: 673 GCISLRKLHSSIGDVKMLTYLNLGGCEKLQSLPSSMK-FESLEVLHLNGCRNFTNFPEV 730



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 107/170 (62%), Gaps = 8/170 (4%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
            LP  I +L++L+ L L GCSN ++FPEI  N+    DL+++ETAI ELP SIG+L+RL  
Sbjct: 914  LPKSIWSLEALQTLSLRGCSNFEKFPEIQRNMGSLLDLEIEETAITELPLSIGHLTRLNS 973

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            L+L NC  L+S+ S +C LKSL+ L+L+ C  LE  PE + ++E L  L L       +P
Sbjct: 974  LNLENCKNLRSLPSSICRLKSLKHLSLNCCSNLEAFPEILEDMEHLRSLELRGTAITGLP 1033

Query: 598  SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
            SS++ L  L  L+L NC  L++LP     L C +++  R+C+ L  L ++
Sbjct: 1034 SSIEHLRSLQWLKLINCYNLEALPNSIGNLTCLTTLVVRNCSKLHNLPDN 1083



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 103/201 (51%), Gaps = 31/201 (15%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I  L SLK L L  CSNL+ FPEI  ++E    L+L+ TAI  LPSSI +L  L 
Sbjct: 984  SLPSSICRLKSLKHLSLNCCSNLEAFPEILEDMEHLRSLELRGTAITGLPSSIEHLRSLQ 1043

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--------------------- 575
             L L NC  L+++ + + NL  L  L +  C KL  LP+                     
Sbjct: 1044 WLKLINCYNLEALPNSIGNLTCLTTLVVRNCSKLHNLPDNLRSLQCCLTTLDLGGCNLME 1103

Query: 576  -----EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
                 +I  L SLE+L+++E     IP  + QL KL+ LR+ +C  L+ +P+LP     I
Sbjct: 1104 GGIPRDIWGLSSLEFLDVSENHIRCIPIGIIQLLKLTTLRMNHCLMLEDIPDLPSSLRRI 1163

Query: 630  HARHCTSLKTLSNSSTLLTRS 650
             A  C  L+TLS+   +L  S
Sbjct: 1164 EAHGCRCLETLSSPIHVLWSS 1184



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 26/169 (15%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           SLP+ +  +SL+ L+L GC N   FPE+  N   +++L L+++AIEELPSSIG+L+ L  
Sbjct: 703 SLPSSMKFESLEVLHLNGCRNFTNFPEVHENMKHLKELYLQKSAIEELPSSIGSLTSLEI 762

Query: 538 LDLTNCS-----------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           LDL+ CS                       G+K + S + +L SL  LBLS C   EK P
Sbjct: 763 LDLSECSNFKKFPEIHGNMKFLRELRLNGTGIKELPSSIGDLTSLEILBLSECSNFEKFP 822

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
              GN++ L  L+L     +++PSS+  L+ L  L L  C + +  P++
Sbjct: 823 GIHGNMKFLRELHLNGTRIKELPSSIGSLTSLEILNLSKCSKFEKFPDI 871



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP+ I +L SL+ L L  CS  ++FP+I  N+E L    L  + I+ELPS+IGNL  L +
Sbjct: 844 LPSSIGSLTSLEILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLKE 903

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L   + +K +   + +L++L+ L+L GC   EK PE   N+ SL  L + E    ++P
Sbjct: 904 LSLDK-TFIKELPKSIWSLEALQTLSLRGCSNFEKFPEIQRNMGSLLDLEIEETAITELP 962

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            S+  L++L+ L L+NCK L+SLP   C
Sbjct: 963 LSIGHLTRLNSLNLENCKNLRSLPSSIC 990



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 104/211 (49%), Gaps = 32/211 (15%)

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DL 515
           P     + H +++Y   +    LP+ I +L SL+ L L  CSN K+FPEI  N++   +L
Sbjct: 728 PEVHENMKHLKELYLQKSAIEELPSSIGSLTSLEILDLSECSNFKKFPEIHGNMKFLREL 787

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSG-----------------------LKSVSSR 552
            L  T I+ELPSSIG+L+ L  LBL+ CS                        +K + S 
Sbjct: 788 RLNGTGIKELPSSIGDLTSLEILBLSECSNFEKFPGIHGNMKFLRELHLNGTRIKELPSS 847

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           + +L SL  LNLS C K EK P+   N+E L  L L+    +++PS++  L  L +L L 
Sbjct: 848 IGSLTSLEILNLSKCSKFEKFPDIFANMEHLRKLYLSNSGIKELPSNIGNLKHLKELSLD 907

Query: 613 NCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
                  + ELP    S+ A    SL+  SN
Sbjct: 908 K----TFIKELPKSIWSLEALQTLSLRGCSN 934



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 41/246 (16%)

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI 508
           G++V   + + P +  R  H E  Y +     +LP+  + ++L EL+L   S +K+  + 
Sbjct: 583 GKVVLPPNFEFPSQELRYLHWEG-YPL----KTLPSNFHGENLVELHLRK-STIKQLWKR 636

Query: 509 SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN---CSGLKSVSSRLCNLKSLRRLNLS 565
           S  +E L + + +  ++ + +   SR+  L++ N   C  L+ + S + ++K L  LNL 
Sbjct: 637 SKGLEKLKVIDLSYSKVLTKMPKFSRMPKLEILNLEGCISLRKLHSSIGDVKMLTYLNLG 696

Query: 566 GCLKLEKLPEEIG-----------------------NLESLEYLNLAEKDFEKIPSSMKQ 602
           GC KL+ LP  +                        N++ L+ L L +   E++PSS+  
Sbjct: 697 GCEKLQSLPSSMKFESLEVLHLNGCRNFTNFPEVHENMKHLKELYLQKSAIEELPSSIGS 756

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSIHARHC----TSLKTLSNSSTLLTRSSKHWDIFN 658
           L+ L  L L  C   +  PE+  G+    R      T +K L +S   LT      +I B
Sbjct: 757 LTSLEILDLSECSNFKKFPEIH-GNMKFLRELRLNGTGIKELPSSIGDLTS----LEILB 811

Query: 659 FSNCSN 664
            S CSN
Sbjct: 812 LSECSN 817


>gi|357507435|ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
 gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
 gi|355499021|gb|AES80224.1| TMV resistance protein N [Medicago truncatula]
          Length = 1134

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 281/751 (37%), Positives = 382/751 (50%), Gaps = 152/751 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG+D R  F  HL AAL R+ I TF DDK L RG  IS  L +AI+ S  +I 
Sbjct: 20  YHVFLSFRGEDTRKGFTDHLCAALERKGITTFKDDKDLERGQVISEKLINAIKDSMFAIT 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---C---------PSL 122
           I S  YASS WCL+EL  I+E  +K    V+PVFY VDPSD  +   C            
Sbjct: 80  ILSPDYASSTWCLDELQMIMECSSKNNLHVLPVFYGVDPSDVRHQRGCFEEAFRKHQEKF 139

Query: 123 G--------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
           G        W   F    S          E+ L+E     I +KL    PS  ++ LVG+
Sbjct: 140 GQHSDRVDRWRDAFTQVASYSGWDSKGQHEASLVENIAQHIHRKLVPKLPSCTEN-LVGI 198

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
            S ++E+   L  G  +   +GIWG+GGIGK+TIA A+Y  I   FE + F++N+R+ SE
Sbjct: 199 VSKVEEVNKFLGMGLNDVRFIGIWGMGGIGKSTIARAVYETIRCEFELTCFLENVREISE 258

Query: 225 KVGGLANI------HLNFER--------------RRLSRMKVLIVFYDLTDLKQIDLLIG 264
              GL ++      HL+  R                L R KVL+V  D+ +L Q++ L+G
Sbjct: 259 -TNGLVHLQRQLLSHLSISRNDFHDLYDGKKTIQNSLCRKKVLLVLDDVNELNQLENLVG 317

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           + D F PGSRVIITTRD  LL  H    V   ++   L  +D+L LF   AF  + P  G
Sbjct: 318 KQDWFGPGSRVIITTRDKHLLMTH---GVHKTYKTGMLCKHDALVLFCLKAFKGDKPQEG 374

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +L+LS  V+ Y  G+PLAL+VLGSYL G + + W SAV KL+  PH  +Q  LK+SYD L
Sbjct: 375 YLDLSKEVVDYCGGLPLALEVLGSYLYGRNIDVWHSAVKKLRSFPHPRVQDNLKISYDSL 434

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKITMHD 442
           D  E++IFLD ACFFKG     V++ L++C +  +IGI  L+ +SL+T+   NNK+ MHD
Sbjct: 435 DTMEKDIFLDIACFFKGMKGDKVIDILESCGYFPQIGIQILIERSLITLDSVNNKLGMHD 494

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN----------------------- 479
           LLQEMG +IV QES  DP +RSRLW  EDI +VL +N                       
Sbjct: 495 LLQEMGRDIVFQESPNDPCRRSRLWSQEDIDRVLTKNKGTEAINSIDMKLLQPYEAHWNT 554

Query: 480 ----------------TSLPTGINL--DSLKELYLGGCSNLKRFPEISCNIE---DLDLK 518
                             LP G++    SLK L+  GC  LK  P I+  ++   D+ L 
Sbjct: 555 EAFSKTSQLKFLSLCEMQLPLGLSCLPSSLKVLHWRGCP-LKTLP-ITTQLDELVDITLS 612

Query: 519 ETAIEELPSSI--------------GNLSRLVD--------------------------- 537
            + IE+L   +               NL RL D                           
Sbjct: 613 HSKIEQLWQGVKFMEKMKYLNLAFSKNLKRLPDFSGVPNLEKLILEGCEGLIEVHPSLAH 672

Query: 538 ------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
                 ++L +C  LKS+S +L  + SL++L LSG  K + LPE    +E+L  L L   
Sbjct: 673 HKKVVLVNLKDCKSLKSLSGKL-EMSSLKKLILSGSSKFKFLPEFGEKMENLSMLALEGT 731

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           D  K+P S+ +L  L++L L++CK L  LP+
Sbjct: 732 DIRKLPLSLGRLVGLTNLNLKDCKSLVCLPD 762



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 96/189 (50%), Gaps = 31/189 (16%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFP----EISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           LP  I+ L+SL  L + GCS L R P    EI C +E+L   +TAI+ELPSSI  L  L 
Sbjct: 760 LPDTIHGLNSLITLDISGCSKLCRLPDGLKEIKC-LEELHANDTAIDELPSSIFYLDSLK 818

Query: 537 DLDLTNCSGLKSVS-----------------------SRLCNLKSLRRLNLSGC-LKLEK 572
            L    C G  + S                       S +  L SL  LNLS C L  E 
Sbjct: 819 VLSFAGCQGPSTTSMNWFLPFNLMFGSQPASNGFRLPSSVMGLPSLEYLNLSYCNLSEES 878

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHA 631
            P    +L SL+ L+L   +F  IPSS+ +LS+L  L L  C++LQ LPELP   + ++A
Sbjct: 879 FPNYFHHLSSLKSLDLTGNNFVIIPSSISKLSRLRFLCLNWCQKLQLLPELPLTMTQLNA 938

Query: 632 RHCTSLKTL 640
            +C SL T+
Sbjct: 939 SNCDSLDTM 947



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 3/138 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           SL   + + SLK+L L G S  K  PE    +E+L    L+ T I +LP S+G L  L +
Sbjct: 689 SLSGKLEMSSLKKLILSGSSKFKFLPEFGEKMENLSMLALEGTDIRKLPLSLGRLVGLTN 748

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L +C  L  +   +  L SL  L++SGC KL +LP+ +  ++ LE L+  +   +++P
Sbjct: 749 LNLKDCKSLVCLPDTIHGLNSLITLDISGCSKLCRLPDGLKEIKCLEELHANDTAIDELP 808

Query: 598 SSMKQLSKLSDLRLQNCK 615
           SS+  L  L  L    C+
Sbjct: 809 SSIFYLDSLKVLSFAGCQ 826


>gi|82542033|gb|ABB82024.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1078

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 255/713 (35%), Positives = 379/713 (53%), Gaps = 113/713 (15%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I  F DD  L RG EIS  L  AI+ SK
Sbjct: 48  PEGAYDVFLSFRGEDTRKTFTDHLYTALVQAGIRAFRDDDDLPRGEEISDHLLRAIQESK 107

Query: 71  ISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGY----------- 118
           ISIV+FS+GYASSRWCLNELV+ILE  K K GQIV+P+FY +DPSD              
Sbjct: 108 ISIVVFSKGYASSRWCLNELVEILECKKRKTGQIVLPIFYDIDPSDVRKQTGSFAKAFDK 167

Query: 119 -------------------CPSLGWMGIFDIPTS-ESVLIEGNVNDISKKLSD--LFPSD 156
                                +L    + D+    E+  I+G +ND+  KL    L+  +
Sbjct: 168 HEKRFEEKLVKEWRKALEDAANLSGRSLNDMANGHEAKFIKGIINDVLNKLRRECLYVPE 227

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           +   LVG++ +  +I   L + + +   VGI G+ GIGKTT+A  +++ +   FEGS F+
Sbjct: 228 H---LVGMD-LAHDIYDFLSTATDDVRIVGIHGMPGIGKTTLAKVVFNQLCYRFEGSCFL 283

Query: 217 QNIRDESEKVGGL----------------ANIHLN-----FERRRLSRMKVLIVFYDLTD 255
            NI + S++V GL                ANI+         + RL R +VL+V  D+  
Sbjct: 284 SNINESSKQVNGLVPLQKQLLHDISKQDVANINCVDRGKVMIKDRLCRKRVLVVADDVAH 343

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L+Q + L+G    F PGSRVIITTRD  LL+          ++++EL  ++SL LFS +A
Sbjct: 344 LEQQNALMGERSWFGPGSRVIITTRDSNLLRE-----ADRTYQIEELKPDESLQLFSCHA 398

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F  + PA  +++LS   + Y  G+PLAL+V+G+ L G + + W+  + KL+R+P+ DIQ 
Sbjct: 399 FKDSKPAKDYIKLSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPNHDIQG 458

Query: 376 VLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTI 433
            L++S+D LD EE QN FLD ACFF    +  V   L A C ++ ++ +  L G+SL+ +
Sbjct: 459 RLRISFDALDGEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLQTLHGRSLIKV 518

Query: 434 SN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD- 489
               KITMHDLL++MG E+VR+ S K+PGKR+R+W+ ED + VL +   T +  G+ LD 
Sbjct: 519 DAIGKITMHDLLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDV 578

Query: 490 ---SLKELYLG-----GCSNLKRFPEI-------------------SCNIED-------- 514
                K L  G      C NL +   +                    C ++D        
Sbjct: 579 RASKAKSLSAGLFAEMKCLNLLQINGVHLTGSFKLLSKELMWICWHRCPLKDFPSDFTAD 638

Query: 515 ----LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
               LD++ + ++EL      L+RL   +L++   L  V +   +  SL +L L GC  L
Sbjct: 639 YLAVLDMQYSNLKELWKGKKILNRLKIFNLSHSRNL--VKTPNLHSSSLEKLILKGCSSL 696

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            ++ + IG+  SL +LNL      + +P S++ +  L  +++  C +L+ LPE
Sbjct: 697 VEVHQSIGHSTSLVFLNLKGCWSLKTLPESIRNVKSLETMKIYGCSQLEKLPE 749



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 7/146 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEI-SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           L+ LK   L    NL + P + S ++E L LK  +++ E+  SIG+ + LV L+L  C  
Sbjct: 660 LNRLKIFNLSHSRNLVKTPNLHSSSLEKLILKGCSSLVEVHQSIGHSTSLVFLNLKGCWS 719

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           LK++   + N+KSL  + + GC +LEKLPE +G+++ L  L       E+  SS+ QL  
Sbjct: 720 LKTLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFLTELLADGIKTEQFLSSIGQLKY 779

Query: 606 LSDLRLQNCKRLQSLPELPCGSSIHA 631
           +  L L+ C      P  P  S I A
Sbjct: 780 VKRLSLRGCS-----PTPPSCSLISA 800



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 23/184 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           +LP  I N+ SL+ + + GCS L++ PE   +++   +L       E+  SSIG L  + 
Sbjct: 722 TLPESIRNVKSLETMKIYGCSQLEKLPEGMGDMKFLTELLADGIKTEQFLSSIGQLKYVK 781

Query: 537 DLDLTNCSGL--------KSVSSRLCNLKS-------LRRLNLSGCLKLEKLPE--EIGN 579
            L L  CS            VS   C L +       ++ L LS C   ++     +   
Sbjct: 782 RLSLRGCSPTPPSCSLISAGVSILKCWLPTSFTEWRLVKHLMLSNCGLSDRATNCVDFSG 841

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKT 639
           L SLE L+L+E  F  +P  +  L KLS L +Q C+ L S+P+LP  SS+     +S K+
Sbjct: 842 LFSLEKLDLSENKFSSLPYGIGFLPKLSHLVVQTCEYLVSIPDLP--SSLCLLDASSCKS 899

Query: 640 LSNS 643
           L  +
Sbjct: 900 LERA 903


>gi|356522934|ref|XP_003530097.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1031

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 405/740 (54%), Gaps = 105/740 (14%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPS 61
            +SSSS+++    K+D F++FRG D R +F SHL+AAL R  ++T+ID ++ +G +I   
Sbjct: 11  CASSSSLSVTK--KYDAFITFRGDDTRSDFASHLHAALRRNNVDTYIDYRIEKGAKIWLE 68

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQI-VVPVFYLVDPSDA---- 116
           +  AI+ S + +VIFSE YASS WCLNEL+++++ K +   + V+PVFY +DPS      
Sbjct: 69  IERAIKDSTLFLVIFSENYASSSWCLNELLQLMQCKKQEENVHVIPVFYKIDPSQVRKQS 128

Query: 117 -GYCPSLG---------------WMGIF-----------DIPTSESVLIEGNVNDISKKL 149
             Y  +                 W               +   +E  LIE  +  + +KL
Sbjct: 129 ENYHVAFAKHKKDGKVSEEKMQKWKDALSEAANLSGFHSNTYRTEPDLIEDIIKVVLQKL 188

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
              +P+D +   +  E+    IES L   S E   +GIWG+GGIGKTT+A+AI+  +SSH
Sbjct: 189 DHKYPNDFRGPFISNENYTN-IESFLNINSKEVRIIGIWGMGGIGKTTLAAAIFHKVSSH 247

Query: 210 FEGSYFMQNIRDESEK--VGGLAN----------IHLNFER-------RRLSRMKVLIVF 250
           +EG+ F++N+ +ES++  +  + N          +H++  +       R+L R KV IV 
Sbjct: 248 YEGTCFLENVAEESKRHDLNYVCNKLLSQLLREDLHIDTLKVIPSIVTRKLKRKKVFIVL 307

Query: 251 YDLTDLKQIDLLIGRLDGFV-PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
            D+   + ++ L+G    ++  GSR+I+TTRD  +L       V  + EVK++++ +SL 
Sbjct: 308 DDVNTSELLEKLVGVGREWLGSGSRIIVTTRDKHVLIREV---VDKIHEVKKMNFQNSLE 364

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS NAFG+ +P  G+ ELS   + YA G+PLAL+VLGS+L+  SE EW SA++KLK+ P
Sbjct: 365 LFSLNAFGKTYPEKGYEELSKRAMDYAKGIPLALKVLGSFLRSRSENEWHSALSKLKKSP 424

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           ++ IQ VL++SY GLDD+E+NIFLD ACF KG  +  V   L+ C FSA IGI  L+ K+
Sbjct: 425 NVKIQAVLRLSYAGLDDDEKNIFLDIACFLKGQSRDHVTKILNDCDFSADIGIRSLLDKA 484

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI 486
           L+T + +N I MHDL+QEMG E+VR+ES+K PG+RSRLW P +IY VL  N  T+   GI
Sbjct: 485 LITTTYSNCIDMHDLIQEMGREVVREESVKFPGQRSRLWDPVEIYDVLTNNRGTAAVEGI 544

Query: 487 NLDSLKELYLGGCSNL-KRFPEISC---------------------------NIEDLDLK 518
            LD  +  ++   S + ++ P +                             N+  L   
Sbjct: 545 WLDMTQITHINLSSKVFRKMPNLRLLTFKSHNGDSERINSVYLPKGLEFLPKNLRYLGWN 604

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
              +E LPS      +LV+L +   S ++ +   + NL +L R+ L G   L + P  + 
Sbjct: 605 GYPLESLPSRFFP-EKLVELSMPY-SNVEKLWQGVQNLPNLERIELCGSKHLVECP-RLS 661

Query: 579 NLESLEYLNLAEKDFE------------KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
           +  +L+Y+N                    +P S K L +L  L +  C+ L+ +P LP  
Sbjct: 662 HAPNLKYVNSISLLSSLKCLSFRYSAIISLPESFKYLPRLKLLEIGKCEMLRHIPALPRS 721

Query: 627 SSI-HARHCTSLKTLSNSST 645
             + +  +C SL+T+ +SS 
Sbjct: 722 IQLFYVWNCQSLQTVLSSSA 741


>gi|357486941|ref|XP_003613758.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515093|gb|AES96716.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1095

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 263/721 (36%), Positives = 392/721 (54%), Gaps = 90/721 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S +SS + I    +DVFLSFRG+D R+ F  +L  ALC + I TFIDDK L +G EI+
Sbjct: 7   LKSQASSSSTIERWAYDVFLSFRGEDTRNGFTGNLYKALCGKGINTFIDDKNLGKGEEIT 66

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L  AI+ S+I+IVIFSE YASS +CL EL KI+E     G++V+P+FY VDP+D    
Sbjct: 67  PALMMAIQESRIAIVIFSENYASSTFCLKELTKIMECIKHKGRLVLPIFYQVDPADVRHQ 126

Query: 116 -AGYCPSLG---------------WMGIFDIPTS----------ESVLIEGNVNDISKKL 149
              Y  +L                W        S          E  LI   V ++SKK+
Sbjct: 127 KGSYANALASHERKKTIDKIMVKQWRLALQEAASILGWHFEHGYEYELIGKIVQEVSKKI 186

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISS 208
           +   P       +G+ES ++++ S L   S E    VGI+G+GG+GKTT+A A+Y+ I+ 
Sbjct: 187 NHR-PLHVAKYPIGLESRVQKVNSLLEVESNEGVRMVGIYGMGGLGKTTLACAVYNCIAD 245

Query: 209 HFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKVLI 248
            F+   F+ +IR+ S+K G             G  +I L            RL   K+L+
Sbjct: 246 QFDSLCFLGDIRENSKKRGLVELQDMLLFELTGEKDIKLCSLNKAIPIIESRLRGRKILL 305

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           +  D+  L+Q+  L G L+ F  GSRVIITTRD  LL+ +   RV   +EV+ L + ++L
Sbjct: 306 ILDDIDSLEQLKALAGGLEWFGSGSRVIITTRDKHLLQVYGVERV---YEVEGLKHEEAL 362

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            LF  NAF        + +++  V+ Y+ G+PLA++++GS L G +  EW+SA++  +R+
Sbjct: 363 ELFVWNAFKSKEVEPSYFDIAKKVLLYSKGLPLAIEIIGSDLYGKTILEWQSAIDTYERI 422

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVG 427
           PH +IQ +L+VSYDGL + E+ IFLD  CFFKG     VMN L + R ++    +  L+ 
Sbjct: 423 PHENIQDILRVSYDGLKEFEKEIFLDITCFFKGYKLSDVMNILHSGRGYAPDYAVQVLID 482

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-SLPTGI 486
           KSL+ ++  ++ +HD++++MG EIVR ES   PG RSRLW  +DI  VL EN  S  T I
Sbjct: 483 KSLIKMNEYRVRIHDMIEDMGREIVRLESPSKPGGRSRLWFTKDILHVLKENKGSDKTEI 542

Query: 487 ---NLDSLKELYLGG-----CSNLK-------RF-------PEISCNIEDLDLKETAIEE 524
              NL   KE+   G       NLK       RF       P+    ++  D  E++   
Sbjct: 543 IVLNLLKDKEVQWDGNALKNMENLKILVIEKTRFSRGPNHLPKSLRVLKWFDYPESS--- 599

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLC-NLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           LP+   N  +LV LDL++ +GL +  +++    KSL+ + +S C  L+K+P+  G   +L
Sbjct: 600 LPAHY-NPKKLVILDLSDSTGLFTFGNQMIMKFKSLKEMKISKCQSLKKVPDMSGA-PNL 657

Query: 584 EYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKT 639
           + L+L   K   ++  S+  L KL DL L  C  L  LP    LP   ++  R+CT++K 
Sbjct: 658 KKLHLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILPYGINLPSLKTMSLRNCTTVKN 717

Query: 640 L 640
            
Sbjct: 718 F 718



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 9/184 (4%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTN 542
           +   SLKE+ +  C +LK+ P++S   N++ L L    ++ E+  SIG L +L DL+L  
Sbjct: 629 MKFKSLKEMKISKCQSLKKVPDMSGAPNLKKLHLDSCKSLVEVHDSIGFLEKLEDLNLNY 688

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C+ L  +   + NL SL+ ++L  C  ++  PE +G +E+++YL L+  +  ++P S+  
Sbjct: 689 CTSLTILPYGI-NLPSLKTMSLRNCTTVKNFPEILGKMENIKYLVLSNSEISELPYSIGL 747

Query: 603 LSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFN 658
           L  L +L +  C +L  LP     LP   ++ A  C  L  +      +  +    D+ N
Sbjct: 748 LVGLVNLTIDRCNKLLELPSSIFMLPKLETLEAYCCRGLARIKKRKGQVPETLPS-DVRN 806

Query: 659 FSNC 662
            S+C
Sbjct: 807 ASSC 810



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 86/210 (40%), Gaps = 43/210 (20%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
           T LP GINL SLK + L  C+ +K FPEI     NI+ L L  + I ELP SIG L  LV
Sbjct: 693 TILPYGINLPSLKTMSLRNCTTVKNFPEILGKMENIKYLVLSNSEISELPYSIGLLVGLV 752

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL-----------EKLPEEIGNLES--- 582
           +L +  C+ L  + S +  L  L  L    C  L           E LP ++ N  S   
Sbjct: 753 NLTIDRCNKLLELPSSIFMLPKLETLEAYCCRGLARIKKRKGQVPETLPSDVRNASSCLV 812

Query: 583 ----------------------LEYLNLAEKDFEKI---PSSMKQLSKLSDLRLQNCKRL 617
                                 L Y+     D+  I   PSS+     L  L + NC  L
Sbjct: 813 HRDVDLSFCYLPYEFLATLLPFLHYVTNISLDYSSITILPSSINACYSLMKLTMNNCTEL 872

Query: 618 QSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
           + +  LP     + A +C SL + S    L
Sbjct: 873 REIRGLPPNIKHLGAINCESLTSQSKEMLL 902


>gi|255544956|ref|XP_002513539.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223547447|gb|EEF48942.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1403

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 268/705 (38%), Positives = 364/705 (51%), Gaps = 112/705 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           + VF S R +D   +FV +L   L  + +  F  D K   G  I   L  AIEGSKI++V
Sbjct: 21  YHVFFSVRIEDTCRSFVRNLYKHLEHKGLLCFKHDGKPESGKPIPLDLLKAIEGSKIAVV 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP-----SDAGYCPSLGWMGIFD 129
           + S+ YASS WCL+ELVKI+E K   GQ V P+F+ VDP         +   L      D
Sbjct: 81  VISQNYASSSWCLDELVKIIECKEIKGQSVFPIFHDVDPLQVKDQTGSFAQVLAEYEKDD 140

Query: 130 ----------IPTSESVLIEG-NVND--------------ISKKLSDLFPSDNKDQLVGV 164
                     +  ++  LI+G N  D              I K  S +  SD  + LVG+
Sbjct: 141 SMVEKAQRWRVALTKVALIDGWNSRDWPDDHKLTEEVSGAILKAWSQMSFSD-INGLVGI 199

Query: 165 ESIIKEIESQLLSGSTEFNT----VGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           +S +++I++ L     EF T    VGIWG+GGIGKTT A A+++ IS+  E +YF+ N+R
Sbjct: 200 DSRVEQIQTLL---DMEFTTNVLFVGIWGMGGIGKTTTAKALFTQISNELEAAYFVANVR 256

Query: 221 DESEKVG--------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           +ESEK                      G+ +I   F   RL R ++LIV  D+++++Q+ 
Sbjct: 257 EESEKRTVVRLRDEILSNILEEENLHLGMRSILPRFILNRLRRKRILIVLDDVSNVEQLT 316

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G    F  GSRVIIT+RD Q+L N        ++EVK L+Y ++L L S   F QNH
Sbjct: 317 TLAGDHSWFGSGSRVIITSRDKQVLVN----AADRIYEVKGLNYCEALQLLSFKVFKQNH 372

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P  G++ELS  V+ Y  GVPLAL VL S+L     EEW S + KL+   +++IQKVLK+S
Sbjct: 373 PVEGYIELSKRVVNYTKGVPLALNVLASFLYSKQREEWTSTLEKLEESSNLEIQKVLKIS 432

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           YD L+  +++IFLD ACFFKG D   V   LD C F   IGISRLV KSL+ I +NK+ M
Sbjct: 433 YDELEWVDKDIFLDIACFFKGADVDYVTTILDGCDFFPSIGISRLVDKSLIAIIDNKLDM 492

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLK------ 492
           HDLLQEMG  IV++ES ++PGK SRLW PE I+ VL  N  T    GI LD  K      
Sbjct: 493 HDLLQEMGQHIVQKESSENPGKNSRLWTPESIHHVLTGNRGTFATEGIFLDISKIEKVDL 552

Query: 493 --------------------------------ELYLGGCSNLKRFPEISCNIEDLDLKET 520
                                           E  L     L+  P   C    L     
Sbjct: 553 SSVAFSKMWNLRLLKFYHNSFLSWKNPTGFVSESTLDSRDGLQSLPNKLCF---LHWHGY 609

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIG 578
             E LPS+  ++  LV+L++   S +K + + + +L+ L+ L+L     L  LP+     
Sbjct: 610 PWESLPSNF-SMENLVELNMP-FSQVKELWTGVKHLQKLKLLDLHDSELLVTLPDLSSAS 667

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           NLE +   N       +IPSS++ L KL  L L NCK LQSLP L
Sbjct: 668 NLEKIILNNCT--SLLEIPSSIQCLRKLVCLSLSNCKELQSLPSL 710



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 8/147 (5%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           E  SLP+ I L  LK L L  CSNLK+FPEIS  IE+L L  T +EE PSS+  L +L  
Sbjct: 703 ELQSLPSLIPLKYLKTLNLSSCSNLKKFPEISGEIEELHLDGTGLEEWPSSVQYLDKLRL 762

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L +C  LKS+   + +L SL  L+LS C  L+  P+ +GN   ++YLN+     E++P
Sbjct: 763 LSLDHCEDLKSLPGSI-HLNSLDNLDLSWCSSLKNFPDVVGN---IKYLNVGHTAIEELP 818

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELP 624
           SS+  L  L+ L L++ +    + ELP
Sbjct: 819 SSIGSLVSLTKLNLKDTE----IKELP 841



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 105/218 (48%), Gaps = 50/218 (22%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP  I+L+SL  L L  CS+LK FP++  NI+ L++  TAIEELPSSIG+L  L  L+L
Sbjct: 773 SLPGSIHLNSLDNLDLSWCSSLKNFPDVVGNIKYLNVGHTAIEELPSSIGSLVSLTKLNL 832

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLS-----------GCLK-------------------- 569
            + + +K + S + NL SL  LNL            GCL                     
Sbjct: 833 KD-TEIKELPSSIGNLSSLVELNLKESSIKELPSSIGCLSSLVKLNIAVVDIEELPSSLG 891

Query: 570 ---------LEK-----LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
                    LEK     LP  IG L SL  LNLA  + +++P S+  LS L +L L  C 
Sbjct: 892 QLSSLVEFNLEKSTLTALPSSIGCLTSLVKLNLAVTEIKELPPSIGCLSSLVELNLSQCP 951

Query: 616 RLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLTR 649
            L SLP    EL C   ++      L+++ +S   L R
Sbjct: 952 MLGSLPFSIGELKCLEKLYLCGLRRLRSIPSSIRELKR 989



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 102/199 (51%), Gaps = 14/199 (7%)

Query: 475  VLNENTSLPTGIN-LDSLKELYLGGCSNLKRFP----EISCNIEDLDL-KETAIEELPSS 528
             + E   LP  I  L SL EL L  C  L   P    E+ C +E L L     +  +PSS
Sbjct: 925  AVTEIKELPPSIGCLSSLVELNLSQCPMLGSLPFSIGELKC-LEKLYLCGLRRLRSIPSS 983

Query: 529  IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
            I  L RL D+ L +C+ L  + S L    SLR L LS    + K+P  +G L SL+ L L
Sbjct: 984  IRELKRLQDVYLNHCTKLSKLPS-LSGCSSLRDLVLSYS-GIVKVPGSLGYLSSLQVLLL 1041

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNSSTLL 647
               +F +IP++++QLS L  L +  CKRL++LPELP    +   H CTSLKT+S+     
Sbjct: 1042 KGNNFMRIPATIRQLSWLEVLDISYCKRLKALPELPQRIRVLVAHNCTSLKTVSSPLIQF 1101

Query: 648  TRSSKHWDI----FNFSNC 662
              S +        F F+NC
Sbjct: 1102 QESQEQSPDDKYGFTFANC 1120



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 93/168 (55%), Gaps = 11/168 (6%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           L TG+ +L  LK L L     L   P++S   N+E + L   T++ E+PSSI  L +LV 
Sbjct: 636 LWTGVKHLQKLKLLDLHDSELLVTLPDLSSASNLEKIILNNCTSLLEIPSSIQCLRKLVC 695

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L+NC  L+S+ S L  LK L+ LNLS C  L+K PE  G +E    L+L     E+ P
Sbjct: 696 LSLSNCKELQSLPS-LIPLKYLKTLNLSSCSNLKKFPEISGEIEE---LHLDGTGLEEWP 751

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSN 642
           SS++ L KL  L L +C+ L+SLP    L    ++    C+SLK   +
Sbjct: 752 SSVQYLDKLRLLSLDHCEDLKSLPGSIHLNSLDNLDLSWCSSLKNFPD 799


>gi|357513247|ref|XP_003626912.1| Resistance protein [Medicago truncatula]
 gi|355520934|gb|AET01388.1| Resistance protein [Medicago truncatula]
          Length = 1925

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 248/683 (36%), Positives = 378/683 (55%), Gaps = 80/683 (11%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P   +DVFL+FRG+D R +FVSHL+AAL    I TF+DDK L +G E+ P L  AIE S+
Sbjct: 9   PQWVYDVFLNFRGEDTRSSFVSHLHAALSNAGINTFLDDKKLEKGEELGPELLRAIEVSR 68

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYC------ 119
           ISI++FS+ Y +S WCL EL +I++ +  YGQ+V+P+FY VDPS       GY       
Sbjct: 69  ISIIVFSKSYITSSWCLKELEQIMKCRKNYGQVVMPIFYHVDPSALRHQKDGYGKALQAT 128

Query: 120 ----PSLG-----WMGIFDIPTSESVLIEG-NVNDISK--KLSDLFPSDNKDQL------ 161
               PS G      +  + I  +E+  I G ++N  S   +L  L   D + +L      
Sbjct: 129 AKRRPSGGERRKYALSNWKIALTEAANISGWDINKSSNEGELMPLIIEDVRRKLNSRLMS 188

Query: 162 -----VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
                VG+ + ++++   +   S++   +GIWG+GG GKTT A  IY+ I   F    F+
Sbjct: 189 ITEFPVGLHTRVQQVIQFIEKQSSKVCMIGIWGMGGSGKTTTARDIYNKIHRKFVDHSFI 248

Query: 217 QNIRDESEKVGG---------LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
           +NIR+  EK            L+N+    E+R + R K LIV  D++ L+Q++ L     
Sbjct: 249 ENIREVYEKENRGITHLQEQLLSNVLKTIEKRFM-RKKTLIVLDDVSTLEQVEALCINCK 307

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F  GS +I+T+RDV++LK     +V  ++ +KE+  N SL LF  +AF +  P   F E
Sbjct: 308 CFGAGSVLIVTSRDVRILK---LLKVDRIYNIKEMDENKSLELFCWHAFREPSPKGDFSE 364

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL-DD 386
           LS  ++ Y  G+PLAL+V+GSYL+  + +EW S ++KL+R+P   + + L++SYDGL +D
Sbjct: 365 LSRRIVVYCRGLPLALEVIGSYLRDRTIQEWISVLSKLERIPDDKVHEKLRISYDGLKND 424

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQ 445
            E++IFLD  CFF G D+  V   +D C F A IGI+ L+ +SL+ I  +NK+ MH LL+
Sbjct: 425 TEKDIFLDICCFFIGKDRAYVSEIIDGCDFYAGIGITVLIERSLLKIEKSNKLGMHSLLR 484

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRF 505
           +MG EIVR+ SIK+PGKRSRLW  +D ++VL E T     +++ +++ L L         
Sbjct: 485 DMGREIVRKRSIKEPGKRSRLWFHKDAHKVLTEKTPRSAMVDIKTVEGLVL--------- 535

Query: 506 PEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
             +S N  D+ ++    +E+ +    L +L  +DLT   G  S        K LR L+  
Sbjct: 536 --MSQNTNDVCIETNTFKEMKNL--RLLKLHHVDLTGAFGFLS--------KELRWLHWQ 583

Query: 566 GCLKLEKLPEE--IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE- 622
           G    E +P++  +GNL   E   L   + +++ +  K +  L  L L + K L S P+ 
Sbjct: 584 G-FTHEYIPDDFFLGNLVVFE---LKHSNIKQVWNETKLMKNLKILNLSHSKYLTSTPDF 639

Query: 623 --LPCGSSIHARHCTSLKTLSNS 643
             LP    +  + C SL  +  S
Sbjct: 640 SKLPNLEKLIMKDCPSLSEVHQS 662



 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 238/717 (33%), Positives = 349/717 (48%), Gaps = 145/717 (20%)

Query: 12   PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
            P   HDVF+SFRG+D R  FVSHL AAL    I T+ D +L++G E+ P LS  IE S I
Sbjct: 1086 PRWIHDVFISFRGEDTRKTFVSHLYAALTNAGINTYTDSQLHKGVELGPELSQGIEWSHI 1145

Query: 72   SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIP 131
            SIV+FS+ Y  S WCLNEL KI+E    +G +VVPVFY VDPS   Y    G  G   + 
Sbjct: 1146 SIVVFSKRYTESCWCLNELKKIMECYRTHGHVVVPVFYDVDPSVVRY--QKGDFGKALLS 1203

Query: 132  TSESVLIEGNVNDISKKLS---------------DLFPSDNKDQLVG--VESIIKEIESQ 174
            T++ +        +   LS               D+    N+ +L+   V  ++++++S 
Sbjct: 1204 TAKKIYFHSGEERLEYVLSRWTSALTEAANLAGWDVNNCRNEGELMQQIVADVLEKLDSA 1263

Query: 175  LL--SGSTEFNTVG---------------------------------IWGIGGIGKTTIA 199
             L  +G  + N  G                                 IWG+GG+GKTT A
Sbjct: 1264 FLPITGLEKLNCGGRFGKTNAANYAHFEYYLVIEFIVTQPSKVCMMGIWGMGGLGKTTTA 1323

Query: 200  SAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFE---------------------- 237
             A+Y+ I   FE   F++NIR+  EK      IHL  +                      
Sbjct: 1324 KAVYNQIHRKFEDKSFIENIREVYEKYST-GIIHLQQQLLSDILNSKEIIHSIASGTSTI 1382

Query: 238  RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVF 297
             RRL   + L+V  D+T +K +               +I+TTRDV++LK      V  VF
Sbjct: 1383 ERRLQGKRALVVLDDVTTIKHV---------------LIVTTRDVRILK---LLEVDRVF 1424

Query: 298  EVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEE 357
             +KE++  +SL LFS +AF +  P   F ELS  V+ Y                  ++EE
Sbjct: 1425 TMKEMNERESLELFSWHAFRRPIPIKDFSELSRNVVLYER----------------TKEE 1468

Query: 358  WESAVNKLKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRF 416
            WES ++KL+R+P+  +Q+ L++SYDGL D  E++IFLD  CFF G D+  V   L+ C  
Sbjct: 1469 WESILSKLERIPNDQVQEKLRISYDGLKDGMEKDIFLDICCFFIGKDRAYVTEILNGCGL 1528

Query: 417  SAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQV 475
             A IGI+ L+ +SLV +  NNKI MHDL+++MG EIV + S K+PGK SRLW  +D + +
Sbjct: 1529 HAVIGIAILIERSLVKMEKNNKIGMHDLIRDMGREIVCESSTKEPGKLSRLWFHQDAHDI 1588

Query: 476  LNENTSLPT--GINL------------DSLKE------LYLGGCSNLKRFPEISCNIEDL 515
            L +N+   T  G+ L            DS KE      L L        +  +S  +  +
Sbjct: 1589 LTKNSGTETVEGLILRFERTSRVCFSADSFKEMKNLRLLQLDNVDLTGDYGYLSKELRWV 1648

Query: 516  DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS---------LRRLNLSG 566
              +++A   +P  +  L  LV +DL + S +K V +    LK+         L +L +  
Sbjct: 1649 HWQKSAFRYIPDDL-YLGNLVVIDLKH-SNIKQVWNETKYLKTTPDFSKSPNLEKLIMKN 1706

Query: 567  CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            C  L K+ + IG+L  L  +NL + +  + +P ++ QL  L  L L  C ++  L E
Sbjct: 1707 CPCLSKVHQSIGDLNRLHMINLKDCRSLQNLPKNIYQLKSLKTLILSGCSKIDKLEE 1763



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 172/515 (33%), Positives = 252/515 (48%), Gaps = 134/515 (26%)

Query: 185  VGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFE------- 237
            +GIWG+GG+GKTT A A+Y+ I   FE   F++NIR+  EK      IHL  +       
Sbjct: 1309 MGIWGMGGLGKTTTAKAVYNQIHRKFEDKSFIENIREVYEKYST-GIIHLQQQLLSDILN 1367

Query: 238  ---------------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDV 282
                            RRL   + L+V  D+T +K +               +I+TTRDV
Sbjct: 1368 SKEIIHSIASGTSTIERRLQGKRALVVLDDVTTIKHV---------------LIVTTRDV 1412

Query: 283  QLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLA 342
            ++LK      V  VF +KE++  +SL LFS +AF +  P   F ELS  V+ Y       
Sbjct: 1413 RILK---LLEVDRVFTMKEMNERESLELFSWHAFRRPIPIKDFSELSRNVVLYER----- 1464

Query: 343  LQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKG 401
                       ++EEWES ++KL+R+P+  +Q+ L++SYDGL D  E++IFLD  CFF G
Sbjct: 1465 -----------TKEEWESILSKLERIPNDQVQEKLRISYDGLKDGMEKDIFLDICCFFIG 1513

Query: 402  NDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDP 460
             D+  V   L+ C   A IGI+ L+ +SLV +  NNKI MHDL+++MG EIV + S K+P
Sbjct: 1514 KDRAYVTEILNGCGLHAVIGIAILIERSLVKMEKNNKIGMHDLIRDMGREIVCESSTKEP 1573

Query: 461  GKRSRLWHPEDIYQVL--NENTSLPTGINL------------DSLKE------------- 493
            GK SRLW  +D + +L  N  T    G+ L            DS KE             
Sbjct: 1574 GKLSRLWFHQDAHDILTKNSGTETVEGLILRFERTSRVCFSADSFKEMKNLRLLQLDNVD 1633

Query: 494  ----------------------------LYLGGC-------SNLKRF----------PEI 508
                                        LYLG         SN+K+           P+ 
Sbjct: 1634 LTGDYGYLSKELRWVHWQKSAFRYIPDDLYLGNLVVIDLKHSNIKQVWNETKYLKTTPDF 1693

Query: 509  S--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
            S   N+E L +K    + ++  SIG+L+RL  ++L +C  L+++   +  LKSL+ L LS
Sbjct: 1694 SKSPNLEKLIMKNCPCLSKVHQSIGDLNRLHMINLKDCRSLQNLPKNIYQLKSLKTLILS 1753

Query: 566  GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            GC K++KL E+I  +ESL  L   +   +++P S+
Sbjct: 1754 GCSKIDKLEEDIVQMESLTTLIAKDTGVKEVPYSI 1788



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 5/142 (3%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET-AIEELPSSI 529
           +I QV NE   +     L+     YL    +  + P    N+E L +K+  ++ E+  SI
Sbjct: 608 NIKQVWNETKLMKNLKILNLSHSKYLTSTPDFSKLP----NLEKLIMKDCPSLSEVHQSI 663

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           G L  L+ ++L +C+ L ++  ++  LKSL  L +SGC K++KL E I  +ESL  L + 
Sbjct: 664 GGLRNLLLINLKDCTSLSNLPKKINQLKSLTTLIISGCSKIDKLEEGIVQMESLTTLVIK 723

Query: 590 EKDFEKIPSSMKQLSKLSDLRL 611
           +   +++P S+ +L  +  + L
Sbjct: 724 DTGVKEVPYSVVRLKSIGYISL 745


>gi|356559371|ref|XP_003547973.1| PREDICTED: TMV resistance protein N isoform 1 [Glycine max]
          Length = 1001

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 255/664 (38%), Positives = 371/664 (55%), Gaps = 77/664 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D RH F  +L   L    I+TFIDD+ L +G+EI+ +L  AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEITKALEEAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGY--------------- 118
           + SE YASS +CLNEL  IL  +K K  + ++PVFY VDPSD  Y               
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRYHRGSFGEALANHEKK 127

Query: 119 --CPSLGWMGIFDIPTSESVLIEGN---------VNDISKKLSDLFPSD-NK------DQ 160
                +  + I+ +   +     G+           D  K++ +  PS  N+      D 
Sbjct: 128 LKSNYMEKLQIWKMALQQVSNFSGHHFQPDGDKYEYDFIKEIVESVPSKFNRNLLYVSDV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG++S +  ++S L  G+ +  + VGI G+GG+GKTT+A A+Y++I+ HFE   F++N+
Sbjct: 188 LVGLKSPVLAVKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENV 247

Query: 220 RDESEKVG--GLANIHL------------------NFERRRLSRMKVLIVFYDLTDLKQI 259
           R+ S K G   L NI L                  +  +R+L   KVL+V  D+ + +Q+
Sbjct: 248 RETSNKKGLESLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQL 307

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-Q 318
             +I   D F  GSRVIITTRD QLL  H   R    ++V+EL+   +L L ++ AFG +
Sbjct: 308 QAIIDSPDWFGRGSRVIITTRDEQLLVLHNVKRT---YKVRELNEKHALQLLTQKAFGLE 364

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
                 + ++ N  + YA+G+PLAL+V+GS L G S EEWES ++  +R P   I   LK
Sbjct: 365 KKVDPSYHDILNRAVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLK 424

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNN- 436
           VSYD L+++E++IFLD AC FK  +   V + L A    S K  I  LV KSL+ I  + 
Sbjct: 425 VSYDALNEDEKSIFLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSW 484

Query: 437 ----KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLK 492
                + +HDL++++G EIVR+ES K+PGKRSRLW  EDI +VL E  +L   +NL S  
Sbjct: 485 YDKEVMRLHDLIEDVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKTL---VNLTS-- 539

Query: 493 ELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSV 549
            L L  C +L   P++SC  N+E+L   E   +  +  S+G L +L  L+   C  LKS 
Sbjct: 540 -LILDECDSLTEIPDVSCLSNLENLSFSECLNLFRIHHSVGLLGKLKILNAEGCPELKSF 598

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
                 L SL  L+LS C  LE  PE +G +E++  L+L+E    K+P S + L++L +L
Sbjct: 599 PP--LKLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPSFRNLTRLQEL 656

Query: 610 RLQN 613
            L +
Sbjct: 657 ELDH 660



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 39/185 (21%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSR 534
           E  S P  + L SL+ L L  CS+L+ FPEI     NI +LDL E  I +LP S  NL+R
Sbjct: 594 ELKSFPP-LKLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPSFRNLTR 652

Query: 535 LVDLDLTNCS---------GLKSVSSRLCNLKSL-----RRLNL----SGCLKL------ 570
           L +L+L +              ++ S +C +  L     RRL         LKL      
Sbjct: 653 LQELELDHGPESADQLMDFDAATLISNICMMPELYDISARRLQWRLLPDDALKLTSVVCS 712

Query: 571 -----------EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
                      E LP  +    ++E L L       IP  +K+   LS L L  C RLQ 
Sbjct: 713 SVHSLTLELSDELLPLFLSWFVNVENLRLEGSKCTVIPECIKECRFLSILILSGCDRLQE 772

Query: 620 LPELP 624
           +  +P
Sbjct: 773 IRGIP 777


>gi|356522390|ref|XP_003529829.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1086

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 277/827 (33%), Positives = 408/827 (49%), Gaps = 178/827 (21%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEG 68
           N  P  K+DVF+SF G D+R +F+SHL     R +I  F+D K+ +G+++S +L  AIEG
Sbjct: 46  NDTPQIKYDVFVSFSGADIRQDFLSHLVEGFYRRQIHAFVDYKILKGDQLSEALLDAIEG 105

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP-------- 120
           S IS++IFSE YASS WCL ELVKI+E + K GQI++P+FY VDPS+  Y          
Sbjct: 106 SLISLIIFSENYASSHWCLFELVKIVECRKKDGQILLPIFYKVDPSNVRYQKGTYGDAFA 165

Query: 121 ------SLGWMGIFDIPTSESV---------------LIEGNVNDISKKLSDLFPSDNKD 159
                 +L  M  +    +ES                L++  V  +S +L+ +   ++K 
Sbjct: 166 KHEVRHNLTTMQTWRSALNESANLSGFHSSTFRDEAELVKEIVKCVSLRLNHVHQVNSKG 225

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            LVGV   I  +ES L   +T+   +GIWG+GGIGKTTIA  +Y+ +   +EG  F+ NI
Sbjct: 226 -LVGVGKRIAHVESLLQLEATDVRVIGIWGMGGIGKTTIAQEVYNKLCFEYEGCCFLANI 284

Query: 220 RDESEKVG-------------GLANIHLN-------FERRRLSRMKVLIVFYDLTDLKQI 259
           R+ES + G             G  ++ ++       +  RRL R+KVLI+  D+ D +Q+
Sbjct: 285 REESGRHGIISLKKKLFSTLLGEEDLKIDTPNGLPQYVERRLRRIKVLIILDDVNDSEQL 344

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           ++L G  D F  GSR+IITTRD Q+L         +++EV+ L++++SL LF+ NAF + 
Sbjct: 345 EILAGTRDWFGLGSRIIITTRDKQVL----AKESANIYEVETLNFDESLRLFNLNAFKEV 400

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           H    + ELS  V+ YA G+PL L+VLG  L G  +E WES + +LK++    +  ++K+
Sbjct: 401 HLEREYHELSKKVVNYAQGIPLVLKVLGHLLHGKEKEIWESQLERLKKVQSKKVHDIIKL 460

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYL--VMNFLDACRFSAKIGISRLVGKSLVTISN-N 436
           SY+ LD +E+ IFLD ACFF G +  +  +   L    +S   G+ RL  K+L+++S  N
Sbjct: 461 SYNDLDQDEKKIFLDIACFFDGLNLKVNKIKILLKDHDYSVAAGLERLKDKALISVSQEN 520

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLK 492
            +TMH+++QE   +I RQESI+DP  +SRL  P+D+Y VL  N          INL  +K
Sbjct: 521 IVTMHNIIQETAWQIARQESIEDPRSQSRLLDPDDVYLVLKYNKGNEAIRSIVINLSGIK 580

Query: 493 ELYL-------------------GGCSNLKR-----FPE----ISCNIEDLDLKETAIEE 524
           +L L                   G CS L+       P+    +S  +  L      +E 
Sbjct: 581 QLQLNPQVFAKMSKLYFLDFYNKGSCSCLREQGGLYLPQGLESLSNELRYLRWTHYPLES 640

Query: 525 LPS------------------------------------SIGNLSRLVDL---------D 539
           LPS                                    S   L  L DL         D
Sbjct: 641 LPSKFSAENLVELNLPYSRVKKLWQAVPDLVNMRILILHSSTQLKELPDLSKATNLKVMD 700

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL----------------------------- 570
           L  C GL SV   + +LK L +L L GC  L                             
Sbjct: 701 LRFCVGLTSVHPSVFSLKKLEKLYLGGCFSLRSLRSNIHLDSLRYLSLYGCMSLKYFSVT 760

Query: 571 --------------EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
                         ++LP  IG    LE L LA    E +P+S+K L+KL  L +++C+ 
Sbjct: 761 SKNMVRLNLELTSIKQLPSSIGLQSKLEKLRLAYTYIENLPTSIKHLTKLRHLDVRHCRE 820

Query: 617 LQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           L++LPELP    ++ AR C SL+T+   ST   +  ++     F NC
Sbjct: 821 LRTLPELPPSLETLDARGCVSLETVMFPSTAGEQLKENKKRVAFWNC 867



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 3/139 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SL + I+LDSL+ L L GC +LK F   S N+  L+L+ T+I++LPSSIG  S+L  L L
Sbjct: 733 SLRSNIHLDSLRYLSLYGCMSLKYFSVTSKNMVRLNLELTSIKQLPSSIGLQSKLEKLRL 792

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
              + ++++ + + +L  LR L++  C +L  LPE   +LE+L+       +    PS+ 
Sbjct: 793 A-YTYIENLPTSIKHLTKLRHLDVRHCRELRTLPELPPSLETLDARGCVSLETVMFPSTA 851

Query: 601 KQLSKLSDLRLQ--NCKRL 617
            +  K +  R+   NC +L
Sbjct: 852 GEQLKENKKRVAFWNCLKL 870


>gi|356494937|ref|XP_003516337.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1258

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 268/732 (36%), Positives = 376/732 (51%), Gaps = 156/732 (21%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K++VF+SFRG+D R +F SHL AAL    I  F DD+ L RG+ IS SL  AIE S+IS+
Sbjct: 174 KYEVFISFRGEDTRSSFTSHLYAALQNAGIIVFKDDESLPRGHHISDSLLLAIEQSQISV 233

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS---------LGW 124
           V+FS  YA SRWCL EL +I+E     G +VVPVFY VDPS+  +  S         L  
Sbjct: 234 VVFSRNYADSRWCLKELERIMECHRTIGHVVVPVFYDVDPSEVRHQTSHFGNAFQNLLNR 293

Query: 125 MGIFDIPTS--------------------------------------ESVLIEGNVNDIS 146
           M I D+ +S                                      ES  I+  V +++
Sbjct: 294 MSI-DLNSSGEMEMMLNNETNLHGKSWREALREAASISGVVVLDSRNESEAIKNIVENVT 352

Query: 147 KKL--SDLFPSDNKDQLVGVESIIKEIESQLLSG--STEFNTVGIWGIGGIGKTTIASAI 202
           + L  ++LF +DN    VGVES ++++  QLL    S +   +GIWG+GGIGKTTIA AI
Sbjct: 353 RLLDKTELFIADNP---VGVESRVQDM-IQLLDQKLSNDVELLGIWGMGGIGKTTIAKAI 408

Query: 203 YSNISSHFEGSYFMQNIRDESEKVGG-------------------LANIHL--NFERRRL 241
           ++ I  +FEG  F+  IR+  E+  G                   + NI L  N  + RL
Sbjct: 409 FNKIGRNFEGRSFLAQIREAWEQDAGQVHLQEQLLFDIDKESKTKIPNIELGKNILKERL 468

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
              KVL++  D+  L Q++ L G  + F  GSR+IITTRD+ +L   RG RV  V+ +KE
Sbjct: 469 RHKKVLLILDDVNKLHQLNALCGNREWFGSGSRIIITTRDMHIL---RGRRVDKVYTMKE 525

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
           ++ ++S+ LFS +AF Q  P   F ELS  VI Y+ G+PLAL+VLGSYL  M   EW+  
Sbjct: 526 MNEDESIELFSWHAFKQPSPREDFTELSRNVIAYSGGLPLALEVLGSYLFDMEVTEWKCV 585

Query: 362 VNKLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
           + KLK++P+ ++Q+ LK+S+DGL DD E+ IFLD ACFF G D+  V++ L+     A+ 
Sbjct: 586 LEKLKKIPNDEVQEKLKISFDGLNDDTEREIFLDIACFFIGMDRNDVIHILNGSELYAEN 645

Query: 421 GISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--- 476
           GI  LV +SLVT+   NK+ MHDLL++MG EI+R +S K+P +RSRLW  ED+  VL   
Sbjct: 646 GIRVLVERSLVTVDKKNKLGMHDLLRDMGREIIRVKSPKEPEERSRLWFHEDVLDVLLKE 705

Query: 477 --------------NENTSLPTGINLDSLKELYL---------GGCSNLKR--------- 504
                           NT   +  +   +K+L L         G   NL R         
Sbjct: 706 SGTKAVEGLTLMLPRSNTKCLSTTSFKKMKKLRLLQFAGVELAGDFKNLSRDLRWLYWDG 765

Query: 505 FP------------EISCNIEDLDLKETAIEEL------------------PSSIGNLSR 534
           FP             +S  +E+ ++     E L                       NL  
Sbjct: 766 FPFKCIPADLYQGSLVSIELENSNISHMWKEALLMEKLKILNLSHSHYLTQTPDFSNLPY 825

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA----- 589
           L  L L +C  L  VS  + +L+ +  +NL  C+ L  LP  I NL+SL+ L L+     
Sbjct: 826 LEKLILIDCPRLFEVSHTIGHLRDIVLINLEDCVSLRNLPRSIYNLKSLKTLILSGCLMI 885

Query: 590 ---EKDFEKIPS 598
              E+D E++ S
Sbjct: 886 DKLEEDLEQMKS 897



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 12/144 (8%)

Query: 469 PEDIYQ-------VLNENTS--LPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDL 517
           P D+YQ       + N N S      + ++ LK L L     L + P+ S    +E L L
Sbjct: 772 PADLYQGSLVSIELENSNISHMWKEALLMEKLKILNLSHSHYLTQTPDFSNLPYLEKLIL 831

Query: 518 KETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
            +   + E+  +IG+L  +V ++L +C  L+++   + NLKSL+ L LSGCL ++KL E+
Sbjct: 832 IDCPRLFEVSHTIGHLRDIVLINLEDCVSLRNLPRSIYNLKSLKTLILSGCLMIDKLEED 891

Query: 577 IGNLESLEYLNLAEKDFEKIPSSM 600
           +  ++SL  L        ++P S+
Sbjct: 892 LEQMKSLTTLIADRTAITRVPFSV 915


>gi|225460105|ref|XP_002275120.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 1915

 Score =  365 bits (936), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 281/747 (37%), Positives = 398/747 (53%), Gaps = 127/747 (17%)

Query: 1   MASSSSSINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEI 58
           MASS++     P+P  +DVFLSFRG+D R NF  HL   L    I TF DD+ L +G +I
Sbjct: 1   MASSAT-----PNPHSYDVFLSFRGEDTRKNFTDHLYNTLVAYGIHTFRDDEELLKGEDI 55

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
              LS AIEGSKI I+IFSE YA+S+WCLNEL  I+E        V+PVFY V PSD G+
Sbjct: 56  KSGLSRAIEGSKIFIIIFSENYAASKWCLNELAMIIEYTTLEDNKVIPVFYHVKPSDVGH 115

Query: 119 CPSLGWMGIF----DIPTSESVLIEGNVNDISK--KLSDLFPSDNK-------------- 158
                 +  F    D    +  LIE     + K  KLS  +  DN+              
Sbjct: 116 QSESFEVAFFNHEKDADQEKKELIEKWRITLKKAAKLSG-YHVDNQHEAEVIQKIREVII 174

Query: 159 -----------DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
                      D +VG++  +K+++S + +   + + VGI+GIGGIGKTTIA A Y++IS
Sbjct: 175 TRLNRKPLYVGDNIVGMDFHLKQLKSLVKTELDDVHMVGIYGIGGIGKTTIAMAFYNDIS 234

Query: 208 SHFEGSYFMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKV 246
           S F+GS F++ + ++S+  GGL  +                      +N  ++RL   +V
Sbjct: 235 SRFDGSSFLRGVGEKSK--GGLLELQKKLFKDILKCESTDFDDTSEGINGIKKRLCSKRV 292

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           LIV  D+ +L+Q++ L G+   +   S +IITT+D  LL  H    V  ++EVKEL++ +
Sbjct: 293 LIVLDDVEELEQLENLAGKNGWYGAKSTIIITTKDTSLLSQHG---VNILYEVKELNHKE 349

Query: 307 SLTLFSRNAFGQN--HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           ++ LF+  AF QN   P   F  LS+ V+ YA G+P+AL+VLG +L G   +EW+SA++K
Sbjct: 350 AIDLFNWWAFKQNIPKPKEDFESLSHCVVGYAKGLPIALKVLGGFLFGKKIDEWKSALHK 409

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           L+++PHM +Q VLKVSY+ LDD E+ IFLD ACFFKG D+ LV   L   R+ A IGI  
Sbjct: 410 LEKIPHMKVQSVLKVSYERLDDTEKEIFLDIACFFKGKDKDLVSRILG--RY-ADIGIKV 466

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT---- 480
           L  + L+TIS NK+ MHDLLQ+MG EIVRQE +K+PGKRSRLW   D+  +L  NT    
Sbjct: 467 LHERCLITISQNKLDMHDLLQQMGQEIVRQECLKEPGKRSRLWDSNDVDSMLTRNTGTEA 526

Query: 481 ------SLPTGINLD-------SLKELYLGGCSNLK---------RFPEISCNIEDLDLK 518
                  +PT   +         +  L L    N +          FP  S  +  L+  
Sbjct: 527 IEGLFVEIPTSNKMQFSTNSFTKMNRLRLFIVYNKRYWNCFKGDFEFP--SSQLRYLNFY 584

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSV--------SSRLCNL-------------- 556
             ++E LP++  N   LV+LDL   SG+K +        S ++ NL              
Sbjct: 585 GCSLESLPTNF-NGRNLVELDLVR-SGIKKLWKGDEIFNSLKVINLGYSKYLVEIPDFSS 642

Query: 557 -KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
             +L  LNL GC  LE  P+   N+  L  +NL+     ++PSS++ L+ L    L  C 
Sbjct: 643 VPNLEILNLEGCTSLESFPKIKENMSKLREINLSGTAIIEVPSSIEHLNGLEYFNLSGCF 702

Query: 616 RLQSLPELPCG----SSIHARHCTSLK 638
            L SLP   C      +++   C+ LK
Sbjct: 703 NLVSLPRSICNLSSLQTLYLDSCSKLK 729



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 109/204 (53%), Gaps = 33/204 (16%)

Query: 477  NENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNL 532
            N   SLP  I  L SL  L   GCS LK FPEI  NIE   +L L  TAI+ELP+SI  L
Sbjct: 1419 NNLVSLPETIYRLKSLVFLSCTGCSQLKSFPEILENIENLRELSLHGTAIKELPTSIERL 1478

Query: 533  SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
              L DL L+NCS L ++   +CNL+ L+ LN++ C KLEK P+ +G+L+ LE L  A  D
Sbjct: 1479 GGLQDLHLSNCSNLVNLPESICNLRFLKNLNVNLCSKLEKFPQNLGSLQRLELLGAAGSD 1538

Query: 593  FEKIPSSMK----------------------------QLSKLSDLRLQNCKRLQSLPELP 624
              ++  +++                            QLSKL  L L +C++L  +PELP
Sbjct: 1539 SNRVLGAIQSDDCRMSSWKALNLSINYFSSIIPISIIQLSKLRVLDLSHCQKLLQIPELP 1598

Query: 625  CGSSIHARH-CTSLKTLSNSSTLL 647
                I   H C  L+TLS+ S+LL
Sbjct: 1599 PSLRILDVHACPCLETLSSPSSLL 1622



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 98/169 (57%), Gaps = 8/169 (4%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRL 535
            SLP  I NL SL+ LYL  CS LK FPE+     N+E L+L+ TAIEEL SS+G+L  L
Sbjct: 705 VSLPRSICNLSSLQTLYLDSCSKLKGFPEMKDNMGNLERLNLRFTAIEELSSSVGHLKAL 764

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
             LDL+ C  L ++   + N+ SL  LN S CLK++  PE   N+ +LE L+L+    E+
Sbjct: 765 KHLDLSFCKNLVNLPESIFNISSLETLNGSMCLKIKDFPEIKNNMGNLERLDLSFTAIEE 824

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS----IHARHCTSLKTL 640
           +P S+  L  L DL L  C  L +LPE  C  S    +  R+C  L+ L
Sbjct: 825 LPYSIGYLKALKDLDLSYCHNLVNLPESICNLSSLEKLRVRNCPKLQRL 873



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 90/149 (60%), Gaps = 4/149 (2%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I  L SL  L   GCS L  FPEI     N+ +L L+ TAIEELPSSI +L  L 
Sbjct: 1352 SLPSTICELKSLTTLSCSGCSQLTIFPEIFETLENLRELHLEGTAIEELPSSIQHLRGLQ 1411

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L+L  C+ L S+   +  LKSL  L+ +GC +L+  PE + N+E+L  L+L     +++
Sbjct: 1412 YLNLAYCNNLVSLPETIYRLKSLVFLSCTGCSQLKSFPEILENIENLRELSLHGTAIKEL 1471

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            P+S+++L  L DL L NC  L +LPE  C
Sbjct: 1472 PTSIERLGGLQDLHLSNCSNLVNLPESIC 1500



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 97/169 (57%), Gaps = 11/169 (6%)

Query: 465 RLWHPEDIY---QVLNENTS-----LPTGINLDSLKELYLGGCSNLKRFPEISCN---IE 513
           +LW  ++I+   +V+N   S     +P   ++ +L+ L L GC++L+ FP+I  N   + 
Sbjct: 612 KLWKGDEIFNSLKVINLGYSKYLVEIPDFSSVPNLEILNLEGCTSLESFPKIKENMSKLR 671

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           +++L  TAI E+PSSI +L+ L   +L+ C  L S+   +CNL SL+ L L  C KL+  
Sbjct: 672 EINLSGTAIIEVPSSIEHLNGLEYFNLSGCFNLVSLPRSICNLSSLQTLYLDSCSKLKGF 731

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           PE   N+ +LE LNL     E++ SS+  L  L  L L  CK L +LPE
Sbjct: 732 PEMKDNMGNLERLNLRFTAIEELSSSVGHLKALKHLDLSFCKNLVNLPE 780



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 498  GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
            GC   +R  E     + L LK +AI ELP  I +   L  L L  C  L+S+ S +C LK
Sbjct: 1306 GCFKCRRDKECQ---QKLCLKGSAINELPF-IESPFELGSLCLRECKNLESLPSTICELK 1361

Query: 558  SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
            SL  L+ SGC +L   PE    LE+L  L+L     E++PSS++ L  L  L L  C  L
Sbjct: 1362 SLTTLSCSGCSQLTIFPEIFETLENLRELHLEGTAIEELPSSIQHLRGLQYLNLAYCNNL 1421

Query: 618  QSLPE 622
             SLPE
Sbjct: 1422 VSLPE 1426



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 520  TAIEELPSSIGNLSRLVDLDLTNCSGLK-SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEI 577
              I+ + + I NLS LV L L NC+ ++  + S + NL SL +L+L+ C LK  ++   I
Sbjct: 984  VGIQGILNDIWNLSSLVKLSLNNCNLMEVGILSDIWNLSSLVKLSLNNCNLKEGEILNRI 1043

Query: 578  GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTS 636
             +L SLE L+L    F  IP+ ++ LS L  L L++CK+LQ +PELP     ++  HC  
Sbjct: 1044 CHLPSLEELSLDGNHFSSIPAGIRLLSNLRALNLRHCKKLQEIPELPSSLRDLYLSHCKK 1103

Query: 637  LKTL 640
            L+ +
Sbjct: 1104 LRAI 1107



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 31/165 (18%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIG----- 530
            +LP  I N+ SL+ L    C  +K FPEI     N+E LDL  TAIEELP SIG     
Sbjct: 776 VNLPESIFNISSLETLNGSMCLKIKDFPEIKNNMGNLERLDLSFTAIEELPYSIGYLKAL 835

Query: 531 -------------------NLSRLVDLDLTNCSGLKSVSSRLCNLKS-LRRLNLSGCLKL 570
                              NLS L  L + NC  L+ +   L +    LR LN + C+  
Sbjct: 836 KDLDLSYCHNLVNLPESICNLSSLEKLRVRNCPKLQRLEVNLEDGSHILRSLNTTCCIIK 895

Query: 571 EKLPEEIGNLESLEYLNL--AEKDFEKIPSSMKQLSKLSDLRLQN 613
           + +    G   SLE L+L  ++ + E +   +  LS L +L ++N
Sbjct: 896 QGVIWSNGRFSSLETLHLRCSQMEGEILNHHIWSLSSLVELCIRN 940


>gi|359496028|ref|XP_003635135.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Vitis vinifera]
 gi|296090593|emb|CBI40962.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 253/676 (37%), Positives = 362/676 (53%), Gaps = 75/676 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R+NF +HL  ALC++ I TFIDD KL RG  IS +L  AIE S  SI
Sbjct: 24  KYDVFLSFRGEDTRNNFTAHLYHALCQKGIYTFIDDDKLERGEVISSALVEAIENSMFSI 83

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           ++ SE YASSRWCL ELVKILE K   GQ V+P+FY VDP+D                  
Sbjct: 84  IVLSENYASSRWCLEELVKILECKENKGQTVLPIFYHVDPADVRKQRGKFGEALAKHKKN 143

Query: 117 -----------GYCPSLGWMGIFDIPT-SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                           + ++  +D    +E +LI+    +I  KL     SD +D LVG+
Sbjct: 144 MENMERVKIWKDALTKVAYLSGWDSQNKNELLLIKEVAENIWNKLLSTLTSDTED-LVGI 202

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S I+E+E+ L   + +   VGIWG+GGIGKTT+A AIY  IS  FE   F+ ++ D + 
Sbjct: 203 DSHIQEVETLLCLEADDVRMVGIWGMGGIGKTTLARAIYKKISDKFEDRCFLDDVADLAR 262

Query: 225 KVGGLANIHLNFERR-------------RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVP 271
           K   L  + L+   R             RL   KVLIV  ++ + + ++ L+G  + F P
Sbjct: 263 KGQDLKKLLLSNVLRDKNIDVTAPSLKARLHFKKVLIVIDNVNNREILENLVGGPNWFGP 322

Query: 272 GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNI 331
            SR+IITTRD  LL  +    V  V+EV++L    +  LF+  AF  + P+   +EL + 
Sbjct: 323 KSRIIITTRDTHLLAAYG---VNDVYEVQKLQDEKATKLFNHYAFRNDTPSRDVIELIDH 379

Query: 332 VIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNI 391
           VI YA G+PLAL+VLGS L   S++EW   +NKL+++P+M+IQ VL+ S+D LD  +QN+
Sbjct: 380 VIAYAQGLPLALKVLGSSLCKKSKDEWLCELNKLQKIPNMEIQNVLQTSFDELDYYQQNL 439

Query: 392 FLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEI 451
           FLD A  F G  +  V++ L++C F    GI  L+ KSL++  ++++ +HDLL EMG EI
Sbjct: 440 FLDIAFVFWGELKDFVIDILNSCGFFPISGIRTLIDKSLISYIDDQLHIHDLLIEMGKEI 499

Query: 452 VRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGINLDSLKELYLGGCSNLKR--- 504
           VRQ   ++PGKRSRLW  +DI  VL   T         ++L  LKE+     +  K    
Sbjct: 500 VRQTFPEEPGKRSRLWMQQDICHVLENLTGTEKVEVIDLDLHGLKEIRFTTAAFAKMTKL 559

Query: 505 ------FPEISCNIEDLDLKETAIEELPSSIGNLSRL----VDLDLTNCSGLKSVSSRLC 554
                   ++ C +   D  +   +EL     +   L     D    N   L+  +S L 
Sbjct: 560 RVLQIDAAQMQCEVHISDDFKFHYDELRYLFWDYYPLKLLPSDFKSKNLVCLRMPNSHLT 619

Query: 555 NL-------KSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
            L       +SL+ ++LS    L + P+   + NLE L      +    KI  S+  L K
Sbjct: 620 QLWEGNKVFESLKYMDLSDSKYLTETPDFSRVTNLECLILDGCTQ--LCKIHLSLGTLDK 677

Query: 606 LSDLRLQNCKRLQSLP 621
           L+ L L+NC  L+  P
Sbjct: 678 LTLLSLENCINLKHFP 693



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 94/171 (54%), Gaps = 17/171 (9%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDL 538
            P    L SLK L L GC  L++FP+I+ +   +  L L  TAI ELPSSI   + LV L
Sbjct: 692 FPGICQLVSLKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSIAYATELVLL 751

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           DL NC  L S+ S +C L  L+ L+LSGC  L K     GNL++L             P 
Sbjct: 752 DLKNCRKLWSLPSSICQLTLLKTLSLSGCSDLGKCEVNSGNLDAL-------------PR 798

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLT 648
           ++ +L  L  L LQNC+ L++LP LP   + I+AR+C SL+     S L++
Sbjct: 799 TLDKLCNLWRLELQNCRSLRALPALPSSLAIINARNCESLEDAGAFSQLVS 849



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 95/182 (52%), Gaps = 26/182 (14%)

Query: 487  NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
             L S+K L L GC  L++FP+I+ +   +  L L  TAI ELPSSI   + LV LDL NC
Sbjct: 846  QLVSVKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSISYATELVLLDLKNC 905

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
              L S+ S +C L  L  L+LSGC  L K     GNL++L             P ++ QL
Sbjct: 906  RKLWSLPSSICQLTLLETLSLSGCSDLGKCEVNSGNLDAL-------------PRTLDQL 952

Query: 604  SKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL--LTRSSKHWDIFNFS 660
              L  L LQNCK L++LP LP     I+A +C SL+ +S  S    L RS        F 
Sbjct: 953  RNLWRLELQNCKSLRALPVLPSSLEFINASNCESLEDISPQSVFSQLRRSM-------FG 1005

Query: 661  NC 662
            NC
Sbjct: 1006 NC 1007



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 4/141 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            +SLK + L     L   P+ S   N+E L L   T + ++  S+G L +L  L L NC 
Sbjct: 628 FESLKYMDLSDSKYLTETPDFSRVTNLECLILDGCTQLCKIHLSLGTLDKLTLLSLENCI 687

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK     +C L SL+ L LSGC KLEK P+   ++  L  L L      ++PSS+   +
Sbjct: 688 NLKHFPG-ICQLVSLKTLILSGCPKLEKFPDIAQHMPCLSKLYLDGTAITELPSSIAYAT 746

Query: 605 KLSDLRLQNCKRLQSLPELPC 625
           +L  L L+NC++L SLP   C
Sbjct: 747 ELVLLDLKNCRKLWSLPSSIC 767


>gi|255547494|ref|XP_002514804.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223545855|gb|EEF47358.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1082

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 292/801 (36%), Positives = 410/801 (51%), Gaps = 163/801 (20%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKL--NRGNEISPSLSSAIEGSKIS 72
           K+DVFLSF+G+D   NF SHL AALC++ + TF DD+   +RG      +  AI+ S IS
Sbjct: 9   KNDVFLSFQGEDTGKNFTSHLYAALCQKGVITFKDDQELESRGTLSDQEIFKAIQDSSIS 68

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGY-- 118
           IVIFS   ASS  CL+ELV+I E     GQ V+PVFY VDP++            A Y  
Sbjct: 69  IVIFSRNSASSTRCLDELVEIFECMKTKGQNVLPVFYSVDPAEVRKQTGRFGESFAKYEK 128

Query: 119 -------------CPSLGWMGIFDIPTS---ESVLIEGNVNDISKKL---SDLFPSDNKD 159
                          + G   +    T    ES LIE  V ++ KKL   S  F S +K+
Sbjct: 129 LFKNNIGKVQQWRAAATGMANLSGWDTQNRHESELIEEIVEEVLKKLRKSSHRFSSASKN 188

Query: 160 QLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG+ S + E+   L    S +   VGI G+GGIGKTTIA A+Y+ +SS FEGS F+ N
Sbjct: 189 -FVGMNSRLNEMMKYLGKRESDDVRFVGICGMGGIGKTTIARAVYAELSSEFEGSCFLAN 247

Query: 219 IRDESEKVG-----------------GLANIHL--NFERRRLSRMKVLIVFYDLTDLKQI 259
           +R+  EK                    + +IH   N  + RLS  KVLI+  D+  L+Q+
Sbjct: 248 VREVEEKNSLSLQEQLLSETLMERKITVWDIHAGRNEIKNRLSHKKVLIILDDVNHLEQL 307

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             L G  D F  GSR+IITTRD  LL  H   R   ++ V  L+++++L LFS  AF  +
Sbjct: 308 KSLAGMSDWFGNGSRIIITTRDEHLLLCHGVER---IYRVGGLNHDEALRLFSLKAFKND 364

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           +PA  ++ELSN  + YANG+PLAL VLGS L G S  EW+SA+++LK +P+  I   L +
Sbjct: 365 YPADDYVELSNHFVNYANGLPLALDVLGSCLYGRSINEWQSALDRLKEIPNKRILDKLYI 424

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           S++GL + E+ +FLD ACFFKG D++ V+  L++C F A+IGI  L+ KSL+TI+N++I 
Sbjct: 425 SFEGLQEIEKKVFLDIACFFKGEDKHYVVKVLESCGFYAEIGIRVLLSKSLITITNDRIW 484

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS------- 490
           MHDLLQEMG +IVR+   ++PG+RSRLW  +D+  VL+ +T      GI LDS       
Sbjct: 485 MHDLLQEMGRDIVRRSCYEEPGRRSRLWLYKDVSHVLSNDTGTEQVEGIVLDSCEQEDKH 544

Query: 491 --------LKELYLGGCSNLK---RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
                   +++L L    N++       +S  +  L+ +E     LPS+     +LV+L 
Sbjct: 545 LSAKAFMKMRKLRLLKLRNVRLSGSLEYLSNKLRYLEWEEYPFRSLPSTF-QPDKLVELH 603

Query: 540 LTNCS------GLKSVS--------------------SRLCNLKSLRRLNLSGC------ 567
           L + +      G+K +                       L ++K L +L++ G       
Sbjct: 604 LPSSNIQQLWKGMKPLKMLKVIDLSYSVNLIKTMDFRDGLWDMKCLEKLDIGGIAGKQLA 663

Query: 568 --------LKLEKLPEEIGNLE---------------SLEYLNLAE----KDFEKIPS-- 598
                   L    LP +  NL                +L Y NLAE     D    PS  
Sbjct: 664 STKAWDFLLPSWLLPRKTLNLMDFLPSISVLCTLRSLNLSYCNLAEGTLPNDLSCFPSLQ 723

Query: 599 --------------SMKQLSKLSDLRLQNCKRLQSLPELPCGS-SIHARHCTSLKTLSNS 643
                         S+ +LSKL DLR  +CK+LQSLP LP G   +    C+SL T    
Sbjct: 724 SLNLSGNDFVSVPTSISKLSKLEDLRFAHCKKLQSLPNLPSGILYLSTDGCSSLGT---- 779

Query: 644 STLLTRSSKHWDIFN--FSNC 662
            +L    +KH  + N  F+NC
Sbjct: 780 -SLPKIITKHCQLENLCFANC 799



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 47/115 (40%)

Query: 556 LKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ-- 612
           L +LR LNLS C L    LP ++    SL+ LNL+  DF  +P+S+ +LSKL DLR    
Sbjct: 694 LCTLRSLNLSYCNLAEGTLPNDLSCFPSLQSLNLSGNDFVSVPTSISKLSKLEDLRFAHC 753

Query: 613 --------------------------------------------NCKRLQSLPEL 623
                                                       NC+RLQSLP+L
Sbjct: 754 KKLQSLPNLPSGILYLSTDGCSSLGTSLPKIITKHCQLENLCFANCERLQSLPDL 808


>gi|357518219|ref|XP_003629398.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355523420|gb|AET03874.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1106

 Score =  364 bits (934), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 254/727 (34%), Positives = 389/727 (53%), Gaps = 97/727 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA SS S + +   K+DVF+SFRG+D R  F SHL     + K  T+ID ++ +G+ +  
Sbjct: 1   MAPSSFSSHAVALKKYDVFISFRGEDTRAGFTSHLYETFLQSKFHTYIDYRIQKGDHVWA 60

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----D 115
            L+ AI+ S I +V+FS+ YASS WCLNELV+I+E  NK    V+PVFY +DPS      
Sbjct: 61  ELTKAIKQSTIFLVVFSKNYASSTWCLNELVEIMECSNKDNVAVIPVFYHIDPSRVRKQT 120

Query: 116 AGYCPSLG--------------WM-GIFDIPT----------SESVLIEGNVNDISKKLS 150
             Y  +L               W   +F              +ES LIE     + +KL+
Sbjct: 121 GSYGTALAKHKKQGCDHKMMQNWKNALFQAANLSGFHSTTYRTESDLIEDITRVVLRKLN 180

Query: 151 DLFPSDNKDQLV------GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYS 204
             + ++     +       ++S+IK+I+S       E   +G+WG+GGIGKTT+A+A++ 
Sbjct: 181 HKYTNELTCNFILDENYRTIQSLIKKIDS------IEVQIIGLWGMGGIGKTTLAAALFQ 234

Query: 205 NISSHFEGSYFMQNIRDESEKVG----------GLANIHLNFER---------RRLSRMK 245
            +S  +EGS F++N+ + S++ G           L    L+ E          RRL RMK
Sbjct: 235 RVSFKYEGSCFLENVTEVSKRHGINFICNKLLSKLLREDLDIESAKVIPSMIMRRLKRMK 294

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFV-PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
             IV  D+  L+ +  LIG  +G++  GS VI+TTRD  +L +     +  + +VKE++ 
Sbjct: 295 SFIVLDDVHTLELLQNLIGVGNGWLGDGSIVIVTTRDKHVLVS---GGIDKIHQVKEMNS 351

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
            +SL LFS NAF +  P  G++ELS  VI YA G PLAL+VLGS+L   SE EW  A+ K
Sbjct: 352 RNSLQLFSFNAFDKVLPKEGYVELSERVIDYAKGNPLALKVLGSFLCSKSEIEWNCALAK 411

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK +P+ +I K+++ SY+ LDD+E+NIFLD ACFFKG+++  +   L+ C F A IGI  
Sbjct: 412 LKEIPNAEIDKIMRWSYNELDDKEKNIFLDIACFFKGHERDRMTTILNQCGFFADIGIRT 471

Query: 425 LVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTS 481
           L+ K+L+ +   N I MHDL+QEMG ++VR+ES+K+P + SRLW P+++Y VL  N  T 
Sbjct: 472 LLDKALIRVDFENCIQMHDLIQEMGKQVVREESLKNPEQSSRLWDPKEVYDVLKNNRETK 531

Query: 482 LPTGINLDSLKELYLG-GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +   I LD+ +  ++       ++ P +   +   D K      LPS + +L + +   L
Sbjct: 532 IVEAIFLDATESRHINLSPKTFEKMPNLRL-LAFRDHKGIKSVSLPSGLDSLPKNLRYFL 590

Query: 541 TNCSGLKSVSSRLC----------------------NLKSLRRLNLSGCLKLEKLPEEIG 578
            +    KS+    C                      NL +L  L+LS   KL + P   G
Sbjct: 591 WDGYPSKSLPPTFCPEMLVEFSLQDSHVENLWNGELNLPNLEILDLSNSKKLIECPNVSG 650

Query: 579 NLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHC 634
           +L +L+Y+ L       ++ SS+  L KL  L +  C  L+S+    C  +   ++A +C
Sbjct: 651 SL-NLKYVRLNGCLSLPEVDSSIFFLQKLESLIIDGCISLKSISSNTCSPALRELNAMNC 709

Query: 635 TSLKTLS 641
            +L+  S
Sbjct: 710 INLQEFS 716


>gi|357468511|ref|XP_003604540.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505595|gb|AES86737.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1100

 Score =  364 bits (934), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 270/777 (34%), Positives = 392/777 (50%), Gaps = 135/777 (17%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P  K+DVF+SFRGKD+R  F+ HL  A  ++KI  F+D+ + RG+EI  SL  AIEGS I
Sbjct: 95  PQSKYDVFVSFRGKDIRDGFLGHLVKAFRQKKINVFVDNIIKRGDEIKHSLVEAIEGSLI 154

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS--------DAGYCPSLG 123
           S+VIFS+ Y+SS WCL+ELVKI+E K   GQI++PVFY V              +     
Sbjct: 155 SLVIFSKNYSSSHWCLDELVKIIECKKDRGQIIIPVFYGVRSKIVLDELEKKDNFSKVED 214

Query: 124 W-------MGIFDIPTSE----SVLIEGNVNDISKKLSDL--FPSDNKDQLVGVESIIKE 170
           W         +  I  SE    + L+E   N +  +L  L   P ++K  L+G++  I  
Sbjct: 215 WKLALKKSTDVAGIRLSEFRNDAELLEEITNVVLMRLKMLSKHPVNSKG-LIGIDKSIAH 273

Query: 171 IESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLA 230
           + S L   S +   +GIWG+ GIGKTTIA  I++   S ++G  F+  +  E  K+ G+ 
Sbjct: 274 LNSLLKKESQKVRVIGIWGMPGIGKTTIAEEIFNQNRSEYDGCCFLAKV-SEKLKLHGIE 332

Query: 231 NIHLN-FER-------------------RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFV 270
           ++    F +                   RR+ RMKVLI+  D+ D  Q+++L   LD F 
Sbjct: 333 SLKETLFTKILAEDVKIDTPNRLSSDIERRIGRMKVLIILDDVKDEDQLEMLFETLDWFQ 392

Query: 271 PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSN 330
             SR+I+T RD Q+L ++        +EV  L  +D+L LF+ NAF Q+H    F E+S 
Sbjct: 393 SDSRIILTARDKQVLFDNEVDDDDR-YEVGVLDSSDALALFNLNAFKQSHLETEFDEISK 451

Query: 331 IVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQN 390
            V+ YA G PL L+VL   L+G ++E WES ++KLKR+P   +  V+K+SYD LD  E+ 
Sbjct: 452 RVVNYAKGNPLVLKVLAHMLRGKNKEVWESQLDKLKRLPVKKVHDVVKLSYDDLDRLEKK 511

Query: 391 IFLDTACFFKG---NDQYLVMNFLDACRF--SAKIGISRLVGKSLVTIS-NNKITMHDLL 444
            FLD ACFF G      Y+ +  L  C    S  +GI RL  K+L+TIS +N I+MHD+L
Sbjct: 512 YFLDIACFFNGLSLKVDYMKL-LLKDCEGDNSVAVGIERLKDKALITISEDNVISMHDIL 570

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKEL------ 494
           QEMG E+VRQES + P KRSRLW  ++I  VL  +          +NL ++++L      
Sbjct: 571 QEMGREVVRQESSEYPNKRSRLWDHDEICDVLKNDKGTDAIRSICLNLSAIRKLKLSPDV 630

Query: 495 -----------YLGGCSN---------LKRFP---------------------------- 506
                      + GG ++         L+ FP                            
Sbjct: 631 FAKMTNLKFLDFYGGYNHDCLDLLPQGLQPFPTDLRYLHWVHYPLESLPKKFSAEKLVIL 690

Query: 507 --------EISCNIEDL-DLKETA------IEELPSSIGNLSRLVDLDLTN---CSGLKS 548
                   ++ C ++DL +LKE        ++ELP    + S+ ++L + N   C  L S
Sbjct: 691 DLSYSLVEKLWCGVQDLINLKEVTLSFSEDLKELP----DFSKAINLKVLNIQRCYMLTS 746

Query: 549 VSSRLCNLKSLR---RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           V   + +L  L     L+LS C  +  LP   G    LE L L     E IPSS+K L++
Sbjct: 747 VHPSIFSLDKLENIVELDLSRC-PINALPSSFGCQSKLETLVLRGTQIESIPSSIKDLTR 805

Query: 606 LSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           L  L + +C  L +LPELP         C SLK++   ST+  +  ++     F NC
Sbjct: 806 LRKLDISDCSELLALPELPSSLETLLVDCVSLKSVFFPSTVAEQLKENKKRIEFWNC 862


>gi|223452605|gb|ACM89629.1| resistance protein [Glycine max]
          Length = 1001

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 254/664 (38%), Positives = 370/664 (55%), Gaps = 77/664 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D RH F  +L   L    I+TFIDD+ L +G+EI+ +L  AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEITKALEEAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGY--------------- 118
           + SE YASS +CLNEL  IL  +K K  + ++PVFY VDPSD  Y               
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRYHRGSFGEALANHEKK 127

Query: 119 --CPSLGWMGIFDIPTSESVLIEGN---------VNDISKKLSDLFPSD-NK------DQ 160
                +  + I+ +   +     G+           D  K++ +  PS  N+      D 
Sbjct: 128 LKSNYMEKLQIWKMALQQVSNFSGHHFQPDGDKYEYDFIKEIVESVPSKFNRNLLYVSDV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG++S +  ++S L  G+ +  + VGI G+GG+GKTT+A A+Y++I+ HFE   F++N+
Sbjct: 188 LVGLKSPVLAVKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENV 247

Query: 220 RDESEKVG--GLANIHL------------------NFERRRLSRMKVLIVFYDLTDLKQI 259
           R+ S K G   L NI L                  +  +R+L   KVL+V  D+ + +Q+
Sbjct: 248 RETSNKKGLESLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQL 307

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-Q 318
             +I   D F  GSRVIITTRD QLL  H   R    ++V+EL+   +L L ++ AFG +
Sbjct: 308 QAIIDSPDWFGRGSRVIITTRDEQLLVLHNVKRT---YKVRELNEKHALQLLTQKAFGLE 364

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
                 + ++ N  + YA+G+PLAL+V+GS L G S EEWES ++  +R P   I   LK
Sbjct: 365 KKVDPSYHDILNRAVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLK 424

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNN- 436
           VSYD L+++E++IFLD AC FK  +   V + L A    S K  I  LV KSL+ I  + 
Sbjct: 425 VSYDALNEDEKSIFLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSW 484

Query: 437 ----KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLK 492
                + +HDL++++G EIVR+ES K+PGKRSRLW  EDI +VL E  S+   +NL S  
Sbjct: 485 YDKEVMRLHDLIEDVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKSV---VNLTS-- 539

Query: 493 ELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSV 549
            L L  C +L   P++SC   +E L  K+   +  +  S+G L +L  L+   C  LKS 
Sbjct: 540 -LILDECDSLTEIPDVSCLSKLEKLSFKDCRNLFTIHPSVGLLGKLKILNAEGCPELKSF 598

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
                 L SL  L+LS C  LE  PE +G +E++  L+L+E    K+P S + L++L +L
Sbjct: 599 PP--LKLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPSFRNLTRLQEL 656

Query: 610 RLQN 613
            L +
Sbjct: 657 ELDH 660



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 39/185 (21%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSR 534
           E  S P  + L SL+ L L  CS+L+ FPEI     NI +LDL E  I +LP S  NL+R
Sbjct: 594 ELKSFPP-LKLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPSFRNLTR 652

Query: 535 LVDLDLTNCS---------GLKSVSSRLCNLKSL-----RRLNL----SGCLKL------ 570
           L +L+L +              ++ S +C +  L     RRL         LKL      
Sbjct: 653 LQELELDHGPESADQLMDFDAATLISNICMMPELYDISARRLQWRLLPDDALKLTSVVCS 712

Query: 571 -----------EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
                      E LP  +    ++E L L       IP  +K+   LS L L  C RLQ 
Sbjct: 713 SVHSLTLELSDELLPLFLSWFVNVENLRLEGSKCTVIPECIKECRFLSILILSGCDRLQE 772

Query: 620 LPELP 624
           +  +P
Sbjct: 773 IRGIP 777


>gi|357468653|ref|XP_003604611.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505666|gb|AES86808.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1116

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 262/692 (37%), Positives = 377/692 (54%), Gaps = 99/692 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R +F SHL+ +L    I  F DD  L RG+ IS +L  AI+ S+IS+
Sbjct: 63  KYDVFLSFRGEDTRASFTSHLSTSLQSSGIIVFKDDHSLQRGHRISKTLLQAIQESRISV 122

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------------------- 114
           V+FS+ YA S+WCL EL++I+E      Q+V+PVFY V PS                   
Sbjct: 123 VVFSKNYADSQWCLQELMQIMECFRTTRQVVLPVFYDVHPSEVRSQTGDFGKAFQNLLNR 182

Query: 115 ----DAGYCP--------SLGWMGIFDIPT-SESVLIEGNVNDISKKL--SDLFPSDNKD 159
               D    P        + G  G   + + +ES +I+  V ++++ L  +DLF +D+  
Sbjct: 183 VLKVDEFMVPKWRDALRNAAGIAGFVVLNSRNESEVIKDIVENVARLLDKTDLFIADHP- 241

Query: 160 QLVGVES----IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
             VGVES    +I+ +++QL   S +   +G+WG+GGIGKTTIA AIY+ I   F+G  F
Sbjct: 242 --VGVESRVQDMIQLLDTQL---SNKVLLLGMWGMGGIGKTTIAKAIYNKIGRKFQGRSF 296

Query: 216 MQNIRDESEKVGGLANIH---------------LNFE------RRRLSRMKVLIVFYDLT 254
           + NIR+  EK  G  N+                 N E      + RL   +VLIV  D+ 
Sbjct: 297 LANIREVWEKDYGQVNLQEQLMYDIFKETTSKIQNIEAGKYILKDRLCHKRVLIVLDDVN 356

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
            L Q+++L G    F PGSR+IITTRD  +L   R  RV   + +KE+  ++SL LFS +
Sbjct: 357 KLDQLNILCGSRKWFAPGSRIIITTRDKHIL---RRDRVDKTYSMKEMDESESLELFSLH 413

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF Q  P   F E+S  V+KY+ G+PLAL+VLGSYL      EW   + KLK +P+  + 
Sbjct: 414 AFKQTSPTEDFSEISRNVVKYSGGLPLALEVLGSYLFDREILEWICVLEKLKIIPNDQVH 473

Query: 375 KVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           K LK+SYDGL DD E++IFLD ACFF G D+  V+  L+ C   A+IGIS LV +SLVT+
Sbjct: 474 KKLKISYDGLNDDTEKSIFLDIACFFIGMDRNDVIQILNGCGLFAEIGISVLVERSLVTV 533

Query: 434 S-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINL-- 488
              NK+ MHDLL++MG EI+R++S  +P +RSRLW  ED+  VL+E+T   T  G+ L  
Sbjct: 534 DGKNKLGMHDLLRDMGREIIREKSPMEPEERSRLWFHEDVLDVLSEHTGTKTVEGLTLKL 593

Query: 489 ----------------DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL 532
                             L+ L L G      F  +S  +  L      +  +PS     
Sbjct: 594 PGRSAQRFSTKAFKKMKKLRLLQLSGAQLDGDFKYLSRKLRWLHWNGFPLTCIPSKFRQ- 652

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
             +V ++L N S +K V  ++  ++ L+ LNLS    L + P +   L +LE  NL  KD
Sbjct: 653 RNIVSIELEN-SNVKLVWQQMQRMEQLKILNLSHSHYLTQTP-DFSYLPNLE--NLVLKD 708

Query: 593 ---FEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                ++  ++  L K+  + L++C  L +LP
Sbjct: 709 CPRLSEVSHTIGHLKKVLLINLKDCISLCNLP 740



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK L L     L + P+ S   N+E+L LK+   + E+  +IG+L +++ ++L +C 
Sbjct: 675 MEQLKILNLSHSHYLTQTPDFSYLPNLENLVLKDCPRLSEVSHTIGHLKKVLLINLKDCI 734

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++   +  LKSL+ L LSGCLK++KL E++  +ESL  L        K+P S+
Sbjct: 735 SLCNLPRNIYTLKSLKTLILSGCLKIDKLEEDLEQMESLTTLMADNTGITKVPFSV 790


>gi|357468521|ref|XP_003604545.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505600|gb|AES86742.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1092

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 263/707 (37%), Positives = 394/707 (55%), Gaps = 89/707 (12%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPS 61
           A+  +  N  P PK+DVF++FRG+D+RH F+ HL  A  R++I  F+DDKL RG++IS S
Sbjct: 54  AAEKAMSNNAPQPKYDVFVNFRGEDIRHGFLGHLAKAFSRKQINAFVDDKLKRGDDISNS 113

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC-- 119
           L  AIEGS IS++IFSE YASS WCL EL+KI++ K KYGQIV+PVFY VDP++  +   
Sbjct: 114 LVEAIEGSFISLIIFSENYASSSWCLEELLKIIDCKEKYGQIVIPVFYGVDPTNVRHLKK 173

Query: 120 --------------------------PSLGWMGIFDIP-TSESVLIEGNVNDISKKLSDL 152
                                      S    GI  +   +++ L+E  +N + K+LS  
Sbjct: 174 SYGNAFAELEKRHSSLKVQIWRYALNKSANLSGIKSLDYRNDAELLEEIINLVMKRLSK- 232

Query: 153 FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
            P + K  L+G+   +  +ES L   S +   +GIWG+GGIGKTTIA  I+    S +EG
Sbjct: 233 HPINTKG-LIGIGKPMAHLESLLRQESEKVRVIGIWGMGGIGKTTIAEEIFKQNCSEYEG 291

Query: 213 SYFMQNIRDESEKVG-----------------------GLANIHLNFERRRLSRMKVLIV 249
             F+  + +E  + G                       GL+    ++  RR+ RMKVLIV
Sbjct: 292 CCFLAKVSEELGRHGITFLKEKLFSRLLAEDVKIDSPNGLS----SYIERRIGRMKVLIV 347

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ +  QI++L G LD  +  SR+I+TTRD+Q+L     + V HV+EV  L  +++L 
Sbjct: 348 LDDVKEEGQIEMLFGTLDWLLSDSRIIVTTRDMQVLI---CNEVDHVYEVGVLDSSEALE 404

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LF+ NAF Q H    + ELS  VI YA G+PL L+VL   L+G ++E WES ++KLKR+P
Sbjct: 405 LFNLNAFKQRHLETVYFELSKKVIDYAKGIPLVLKVLAHMLRGKNKEVWESQLDKLKRLP 464

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND---QYLVMNFLDACRF--SAKIGISR 424
              +  V+++SYD LD  E+  FLD ACFF G +    Y+ +  L  C    S  +G+ R
Sbjct: 465 VQKVHDVMRLSYDDLDRLEKKYFLDIACFFNGLNLKVDYMKL-LLKDCESDNSVAVGLER 523

Query: 425 LVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTS 481
           L  K+L+TIS +N I+MHD+LQEMG E+VRQES  DP KRSRLW  +DI  VL  ++ T 
Sbjct: 524 LRDKALITISEDNIISMHDILQEMGREVVRQESSADPRKRSRLWDHDDICDVLENDKGTD 583

Query: 482 LPTGINLD--SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           +   I++D    ++L L   +    F +++ N++ LD +    E     + N     D  
Sbjct: 584 VIRSISVDLSGRRKLMLSSHA----FAKMT-NLQFLDFR-GEYEFGEDFLWNQKYDRDCL 637

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           +    GL+S  +   +L+ L  +N      L+  PE+    ++L  L+L++   EK+   
Sbjct: 638 VLLPQGLQSFPT---DLRYLSWMNYP----LKSFPEKFSA-KNLVILDLSDSLVEKLWCG 689

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKTLSNS 643
           ++ L  L ++RL   K L+ LP+    ++   ++  HC +LK++  S
Sbjct: 690 VQDLVNLKEVRLSYSKFLKELPDFSKATNLKVLNMAHCHNLKSVHPS 736



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 24/201 (11%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNC 543
           +L +LKE+ L     LK  P+ S   N++ L++     ++ +  SI +L +LV LDL+ C
Sbjct: 692 DLVNLKEVRLSYSKFLKELPDFSKATNLKVLNMAHCHNLKSVHPSIFSLDKLVHLDLSLC 751

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLE--------------------KLPEEIGNLESL 583
             L + +S   +L SL  LNL  C  L                      LP   G    L
Sbjct: 752 FSLTTFASN-SHLSSLHYLNLGSCKSLRTFSVTTYNLIELDLTNICINALPSSFGCQSRL 810

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNS 643
           E L L   + E IPSS+K L++L  L ++ C +L  LPELP         C SLKT+   
Sbjct: 811 EILVLRYSEIESIPSSIKNLTRLRKLDIRFCSKLLVLPELPSSVETLLVECRSLKTVLFP 870

Query: 644 STLLTRSSKHWDIFNFSNCSN 664
           ST+  +  ++     F NC N
Sbjct: 871 STVSEQFKENKKRIEFWNCWN 891



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T+  +  +L SL  L LG C +L+ F   + N+ +LDL    I  LPSS G  SRL ++ 
Sbjct: 755 TTFASNSHLSSLHYLNLGSCKSLRTFSVTTYNLIELDLTNICINALPSSFGCQSRL-EIL 813

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           +   S ++S+ S + NL  LR+L++  C KL  LPE   ++E+L
Sbjct: 814 VLRYSEIESIPSSIKNLTRLRKLDIRFCSKLLVLPELPSSVETL 857


>gi|82542037|gb|ABB82026.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1070

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 252/737 (34%), Positives = 379/737 (51%), Gaps = 133/737 (18%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRGKD R  F +HL  AL +  I T+ DD +L RG EIS  L  AI+ SK
Sbjct: 11  PEGTYDVFLSFRGKDTRKTFTNHLYTALVQAGIHTYRDDDELPRGEEISDHLLRAIQKSK 70

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSDA-----GYCPSL-- 122
           ISI +FS+GYASSRWCLNEL++IL+ KN K GQIV+P+FY +DPSD       +  +   
Sbjct: 71  ISIPVFSKGYASSRWCLNELLEILKCKNRKTGQIVLPIFYDIDPSDVRKQNDSFAEAFVK 130

Query: 123 ------------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                                   GW         E+  I+  + D+  KL   +     
Sbjct: 131 HEKRFEEKLVKEWRKALEEAGNLSGWNLNAMANGYEAKFIKKIIKDVLNKLDPKYLY-VP 189

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           + LVG++ +  +I   L + + +    GI G+ GIGKTTIA  +++ +   FEGS F+ N
Sbjct: 190 EHLVGMDRLAHDIFYFLSTATDDVRIAGIHGMPGIGKTTIAKVVFNQLCYGFEGSCFLSN 249

Query: 219 IRDESEKVGGLANIHLNFE---------------------RRRLSRMKVLIVFYDLTDLK 257
           I + S+++ GLA +                          R RL   +VL+V  D+    
Sbjct: 250 INETSKQLNGLALLQKQLLHDILKQDVANINNVDRGKVLIRERLCCKRVLVVADDVARQD 309

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++ L+G+   F PGSRVI+TTRD  LL+     +    ++++EL+ + SL LFS +AF 
Sbjct: 310 QLNALMGQRSWFGPGSRVIMTTRDSNLLR-----KADRTYQIEELTRDQSLQLFSWHAFK 364

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
              PA  ++ELS   + Y  G+PLAL+V+G+ L G  +  W+S ++KL+R+P  DIQ  L
Sbjct: 365 DTKPAEDYIELSKDAVDYCGGLPLALEVIGACLSGEEKYIWKSEIDKLRRIPKHDIQGKL 424

Query: 378 KVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTISN 435
           ++S+D LD EE QN FLD ACFF   ++  +   L A C +  +I +  L  +SL+ +  
Sbjct: 425 RISFDALDGEELQNAFLDIACFFIDIEKEYITKVLGARCSYDPEIDLKTLRKRSLIKVLG 484

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD---- 489
             ITMHDLL++MG E+VR+ S K+PGKR+R+W+ ED + VL +   T +  G+ LD    
Sbjct: 485 GTITMHDLLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQKGTDVVEGLALDVRAS 544

Query: 490 SLKELYLGGCSNLKR----------------------------------FP-EISC-NIE 513
             K L  G  + +KR                                  FP +I+  N+ 
Sbjct: 545 EAKSLSAGSFAKMKRLNLLQINGVHLTGSLKLLSKVLMWICWHECPLKYFPSDITLDNLA 604

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTN-----------------------------CS 544
            LD++ + ++EL      L++L  ++L++                             C 
Sbjct: 605 VLDMQYSNLKELWKGEKILNKLKIINLSHSQNLVKTPNLHSSSLEKLILEGCSSLVKGCW 664

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK +   + N+KSL+ +N+SGC +LEKLPE + ++ESL  L     + E+  SS++QL 
Sbjct: 665 RLKILPESIGNVKSLKSMNISGCSQLEKLPEHMDDMESLIELLADGIENEQFLSSIRQLK 724

Query: 605 KLSDLRLQNCKRLQSLP 621
            +  L L+     Q+ P
Sbjct: 725 YIRRLSLRGYNFSQNSP 741



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 40/197 (20%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIE--ELPSSIGNLSRLVD 537
           LP  I N+ SLK + + GCS L++ PE   ++E L +L    IE  +  SSI  L  +  
Sbjct: 669 LPESIGNVKSLKSMNISGCSQLEKLPEHMDDMESLIELLADGIENEQFLSSIRQLKYIRR 728

Query: 538 LDL------------------TNCSGLKSVSS-----RLCNLKSLRRLNLSGCL-KLEKL 573
           L L                  ++     S+SS      LC  +SL +  +   L K  +L
Sbjct: 729 LSLRGYNFSQNSPSSTFWLSPSSTFWPPSISSFISASVLCLKRSLPKAFIDWRLVKSLEL 788

Query: 574 PE-----------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           P+           +   L SLE L+L+   F  +PS +  L  L  L +  C  L S+P+
Sbjct: 789 PDAGLSDHTTNCVDFRGLSSLEVLDLSRNKFSSLPSGIAFLPNLGSLIVVGCNNLVSIPD 848

Query: 623 LPCG-SSIHARHCTSLK 638
           LP     + A +C SL+
Sbjct: 849 LPSNLGYLGATYCKSLE 865


>gi|224131070|ref|XP_002328446.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838161|gb|EEE76526.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1272

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 275/751 (36%), Positives = 383/751 (50%), Gaps = 132/751 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVFLSFRG D R++  SHL  AL R  I+ +ID+KL+ G +I P+L   IE S IS+V
Sbjct: 13  KHDVFLSFRGTDTRNSVTSHLYDALKRNHIDAYIDNKLDGGEKIEPALLERIEESCISLV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL------- 122
           IFSE YA S +CL EL KILE K   GQ+V+PVFY +DPS        Y  +L       
Sbjct: 73  IFSEKYADSTFCLRELSKILECKETKGQMVLPVFYRLDPSHVQNLTGSYGDALCRHERDC 132

Query: 123 -------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDL-FPSDNKDQLV 162
                              GW    ++   E+ LI+  V+DI KKL+    PS + ++LV
Sbjct: 133 CSQEVESWRHASKEIANLKGWDS--NVIKDETKLIQEIVSDIQKKLNHAPSPSIDAERLV 190

Query: 163 GVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G+ES +++IES L  GST     VGIWG+ GIGK+T A A+Y    S FEG  F QN+R+
Sbjct: 191 GMESRVEDIESLLSFGSTGTVLIVGIWGMCGIGKSTTAEAVYHRNRSKFEGHCFFQNVRE 250

Query: 222 ESEKVG---------GL----------ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           ES+K G         G+            +  +  +R L R KVLIVF D+ D + +  L
Sbjct: 251 ESQKHGVDQVRQEILGMVLGKNDLKICGKVLPSAIKRMLQRKKVLIVFDDVDDARDLKYL 310

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           +G    F  GSR+I+T+RD Q+L N        +++VK L   D+L LFS +AF QN+P 
Sbjct: 311 LGEDGLFGQGSRIIVTSRDRQVLIN--ACDEDKIYQVKILVKEDALRLFSLHAFKQNNPI 368

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYL-KGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
            G++ LS  V+    G+PL L+VLG+ L K  S E WES V +L+     DI+K L++ Y
Sbjct: 369 EGYIGLSKTVVSCVQGIPLVLEVLGASLYKKTSLEYWESKVAQLRTTGGEDIKKCLEMCY 428

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
             LD  E+ IFLD ACFF    + L+   LD        GI RL    L+ I  +KI MH
Sbjct: 429 HELDQTEKKIFLDIACFFGRCKRDLLQQTLD---LEESSGIDRLADMCLIKIVQDKIWMH 485

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN-----LDSLKELYL 496
           D+L  +G EIV +E++ DP +RSRLW  ED+ +VL    +  + +      LD+ KEL L
Sbjct: 486 DVLLILGQEIVLRENV-DPRERSRLWRAEDVCRVLTTQGTTGSKVESISLILDATKELRL 544

Query: 497 G-----GCSNLK----RFPE--------------------------ISCNIEDLDLKETA 521
                 G  NL+     +P                           +S  +  L      
Sbjct: 545 SPTAFEGMYNLRLLKIYYPPFLKDPSKEKIMIRTRIGIHLPRGLHFLSSELRFLYWYNYP 604

Query: 522 IEELPSSIGNLSRLVDLDLTNCSGLK------------------------SVSSRLCNLK 557
           ++ LPS+     +LV L++  CS L+                        S+ + +  LK
Sbjct: 605 LKSLPSNFFP-EKLVQLEMP-CSQLEQLWNEGQTYHIRAFHHSKDCSGLASLPNSIGELK 662

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKR 616
           SL +LNL GC +L  LP+ IG L+SL+ L L +      +P S+ +L  L  L L  C  
Sbjct: 663 SLTKLNLKGCSRLATLPDSIGELKSLDSLYLKDCSGLATLPDSIGELKSLDSLYLGGCSG 722

Query: 617 LQSLP----ELPCGSSIHARHCTSLKTLSNS 643
           L +LP    EL    S++ R C+ L +L +S
Sbjct: 723 LATLPESIGELKSLDSLYLRGCSGLASLPDS 753



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 92/182 (50%), Gaps = 19/182 (10%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKE-TAIEELPSSIGNLSR 534
            SLP  I  L SL  LYLGGCS L   P+    ++ LD   L+  + +  LP SIG L  
Sbjct: 748 ASLPDSIGELKSLDSLYLGGCSGLATLPDSIGELKSLDSLYLRGCSGLATLPDSIGELKS 807

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC---------LKLEKLPEEIGNLESLEY 585
           L  L L  CSGL S+ + +  LKSL  L L GC         + L  LP+ IG L+SL +
Sbjct: 808 LDSLYLGGCSGLASLPNSIGELKSLDSLYLRGCSGLASLPDSIGLASLPDSIGELKSLIW 867

Query: 586 LNLAEK-DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTL 640
           L L+     E +P S+ +L  LS L LQ C RL +LP    EL     +    C+ L +L
Sbjct: 868 LYLSSCLGLESLPDSICELKSLSYLYLQGCSRLATLPNKIGELKSLDKLCLEGCSGLASL 927

Query: 641 SN 642
            N
Sbjct: 928 PN 929



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 108/229 (47%), Gaps = 46/229 (20%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKE----TAIEELPSSIGNLSR 534
             SLP  I  L SL  LYL  C  L+  P+  C ++ L        + +  LP+ IG L  
Sbjct: 853  ASLPDSIGELKSLIWLYLSSCLGLESLPDSICELKSLSYLYLQGCSRLATLPNKIGELKS 912

Query: 535  LVDLDLTNCSGLKSVSSRLCN-LKSL---------RRLN------LSGCLKLE------- 571
            L  L L  CSGL S+ + +C+ L SL         R L+      LSG  K+E       
Sbjct: 913  LDKLCLEGCSGLASLPNNICSGLASLPNNIIYLEFRGLDKQCCYMLSGFQKVEEIALSTN 972

Query: 572  ----------------KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
                            K PE +G+L SL  L L++ DFE+IP+S+K L+ L +L L +CK
Sbjct: 973  KLGCHEFLNLENSRVLKTPESLGSLVSLTQLTLSKIDFERIPASIKHLTSLHNLYLDDCK 1032

Query: 616  RLQSLPELPCGSSIH-ARHCTSLKTLSNSSTLLTRSSKHWDI-FNFSNC 662
             LQ LPELP    +  A  C SLK++++      R  K     FNFS C
Sbjct: 1033 WLQCLPELPLTLQVLIASGCISLKSVASIFMQGDREYKAASQEFNFSEC 1081



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKE-TAIEELPSSIGNLSR 534
            +LP  I  L SL  LYLGGCS L   PE    ++ LD   L+  + +  LP SIG L  
Sbjct: 700 ATLPDSIGELKSLDSLYLGGCSGLATLPESIGELKSLDSLYLRGCSGLASLPDSIGELKS 759

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           L  L L  CSGL ++   +  LKSL  L L GC  L  LP+ IG L+SL+ L L      
Sbjct: 760 LDSLYLGGCSGLATLPDSIGELKSLDSLYLRGCSGLATLPDSIGELKSLDSLYLGGCSGL 819

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
             +P+S+ +L  L  L L+ C  L SLP+
Sbjct: 820 ASLPNSIGELKSLDSLYLRGCSGLASLPD 848



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 79/170 (46%), Gaps = 26/170 (15%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
            SLP  I  L SL +L L GCS L                      LP SIG L  L  L
Sbjct: 652 ASLPNSIGELKSLTKLNLKGCSRLA--------------------TLPDSIGELKSLDSL 691

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIP 597
            L +CSGL ++   +  LKSL  L L GC  L  LPE IG L+SL+ L L        +P
Sbjct: 692 YLKDCSGLATLPDSIGELKSLDSLYLGGCSGLATLPESIGELKSLDSLYLRGCSGLASLP 751

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
            S+ +L  L  L L  C  L +LP    EL    S++ R C+ L TL +S
Sbjct: 752 DSIGELKSLDSLYLGGCSGLATLPDSIGELKSLDSLYLRGCSGLATLPDS 801



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 5/129 (3%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           + +  LP+SIG L  L  L+L  CS L ++   +  LKSL  L L  C  L  LP+ IG 
Sbjct: 649 SGLASLPNSIGELKSLTKLNLKGCSRLATLPDSIGELKSLDSLYLKDCSGLATLPDSIGE 708

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHC 634
           L+SL+ L L        +P S+ +L  L  L L+ C  L SLP    EL    S++   C
Sbjct: 709 LKSLDSLYLGGCSGLATLPESIGELKSLDSLYLRGCSGLASLPDSIGELKSLDSLYLGGC 768

Query: 635 TSLKTLSNS 643
           + L TL +S
Sbjct: 769 SGLATLPDS 777


>gi|357514703|ref|XP_003627640.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
 gi|355521662|gb|AET02116.1| NBS-LRR resistance-like protein 4T [Medicago truncatula]
          Length = 1151

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 267/696 (38%), Positives = 388/696 (55%), Gaps = 98/696 (14%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P  KHDVF+SFRG+D R NF S L+AALC+  IET+ID ++ +G E+   L  AI+ S +
Sbjct: 10  PFKKHDVFISFRGEDTRTNFTSFLHAALCKNHIETYIDYRIEKGEEVWEELEKAIKASAL 69

Query: 72  SIVIFSEGYASSRWCLNELVKILESK--NKYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
            +V+FSE YASS WCLNELV+I++ K  ++   +V+PVFY ++ S        Y  +L  
Sbjct: 70  FLVVFSENYASSTWCLNELVEIMKCKKNDEDNVVVIPVFYRIEASHVRKQTGSYHTALLK 129

Query: 123 ----------GW-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                      W + +F++            +E+ LI   +  + +KL+  + ++ +   
Sbjct: 130 QKKQGKDKIQRWKIALFEVANLSGFDSSTYRTEADLIGDIIKAVLQKLNQKYTNELRCLF 189

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           +  E+    IES L   S E  T+GIWG+GGIGKTT+A+AI+  +SS +EGS F++N+ +
Sbjct: 190 IPDENY-SSIESLLKVDSREVRTIGIWGMGGIGKTTLAAAIFQKVSSMYEGSCFLENVTE 248

Query: 222 ESEKVGGLA-------------NIHLNFER-------RRLSRMKVLIVFYDLTDLKQIDL 261
           ES++  GL+             ++H+   +       +RL RMK  IV  D+  L+ +D 
Sbjct: 249 ESKR-HGLSYTYNRLLSKLLGEDLHIETPKVISSMVMKRLKRMKAFIVLDDVRTLELLDN 307

Query: 262 LIGR-LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           LIG   D    GSRVI+TTRD  +L    G  +  + +VKE++  +S+ LFS NAF +  
Sbjct: 308 LIGAGHDCLGVGSRVIVTTRDKHVLT---GGGIDEIHQVKEMNSQNSIRLFSLNAFKKIL 364

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P  G+ E+SN V+ Y  G PLAL+VLGS+L+  S++EW SA+NKLK +P+ +IQKVL++S
Sbjct: 365 PNEGYEEISNNVVSYTKGNPLALKVLGSFLRTKSKKEWNSALNKLKEIPNAEIQKVLRLS 424

Query: 381 YDGLDDEEQNIFLDTACFFKG-NDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKI 438
           YD LDD E+NIFLD ACFFKG      V   L+AC F A IGI  L+ K+LVTI S N I
Sbjct: 425 YDELDDTEKNIFLDVACFFKGFGSSSSVTKILNACGFFADIGIRNLLDKALVTITSENFI 484

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------------PTGI 486
            MHDL+++MG EIVR+ESIK+P +RSRLW+ ++I  VL +N                T I
Sbjct: 485 KMHDLIKQMGREIVREESIKNPRQRSRLWNADEICDVLTDNNGTTAVESICLDMDQTTCI 544

Query: 487 NLDS--------LKELYLGG-------------CSNLKRFPEISCNIEDLDLKETAIEEL 525
           NL+S        LK L                    +  FP    N+         +  L
Sbjct: 545 NLNSNAFTKMPNLKMLAFNDHHQDVMGFNSVHLLEGVDFFPN---NLRSFGWSAYPLNSL 601

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           PS+    S LV+L L   S L+ + +   N  SL R++LS   +L + P    N  +L++
Sbjct: 602 PSNFSP-SNLVELYLPY-SNLEKLWNGAQNFPSLERIDLSKSARLLECP-NFSNAPNLKH 658

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           + L   +    +  S+  L KL DL +  CK L+SL
Sbjct: 659 IKLENCESICHVDPSIFNLPKLEDLNVSGCKSLKSL 694



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 24/184 (13%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN-----------------IEDLDLKETAIE 523
           SL +     S + LY G C NL+ F  +  N                 I +LD+    I 
Sbjct: 693 SLYSSTRSQSFQRLYAGECYNLQEFISMPQNTNDPSTTTTGLTSSTLLIRNLDVFTFPIC 752

Query: 524 E----LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN--LKSLRRLNLSGCLKLEKLPEEI 577
           E    LP +      L D  + +   L ++   L +   + +R L  S C  L ++P+ I
Sbjct: 753 ESLVDLPENFSYDITLSDSKMNDKDTLTTLHKLLPSPCFRYVRGLCFSYCHNLSEIPDSI 812

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTS 636
             L SLE L L       +P S+  L +L    + NC+ LQS+P LP    S    +C S
Sbjct: 813 SLLSSLENLGLFACPIISLPESINCLPRLMFFEVANCEMLQSIPSLPQSIQSFRVWNCES 872

Query: 637 LKTL 640
           L+ +
Sbjct: 873 LQNV 876


>gi|357486939|ref|XP_003613757.1| Disease resistance-like protein [Medicago truncatula]
 gi|355515092|gb|AES96715.1| Disease resistance-like protein [Medicago truncatula]
          Length = 807

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 260/713 (36%), Positives = 378/713 (53%), Gaps = 86/713 (12%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPS 61
           +SSSS N      +DVFLSFRG+D R  F  +L  ALC + I+TFIDD+ L +G EI+P+
Sbjct: 38  ASSSSTN--EWRAYDVFLSFRGEDTRKGFTGNLYKALCGKGIDTFIDDQELRKGEEITPA 95

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP-----SDA 116
           L  AI+ S+I+IVIFSE YASS +CL EL KI+E     G++V+PVFY VDP        
Sbjct: 96  LMMAIQESRIAIVIFSENYASSTFCLKELTKIMECIKHKGRMVLPVFYHVDPCIVRHQKG 155

Query: 117 GYCPSLG---------------WMGIFDIPTS----------ESVLIEGNVNDISKKLSD 151
            Y  +L                W  +     S          E   IE  +  +S+K++ 
Sbjct: 156 SYAKALADHESNKKIDKAKVKQWRLVLQEAASISGWHFEHGYEYEFIEKIIQKVSEKINR 215

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHF 210
             P       VG+ES ++++ S L   S E  + VGI+G+GG+GKTT+A A+Y+ I+  F
Sbjct: 216 R-PLHVAKYPVGLESRVEKVNSLLEVESNEGVHMVGIYGMGGLGKTTLACAVYNCIADQF 274

Query: 211 EGSYFMQNIRDESEKVGGLA--------------------NIHLNFERRRLSRMKVLIVF 250
           +   F+ N+R+ S K G +                     N  ++  + RL   K+L++ 
Sbjct: 275 DSLCFLANVRENSMKHGLVHLQEMLLHELGEEKDHKLCSLNKGVSIIKSRLHGKKILLIL 334

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+  L+Q+  L G LD F  GSRVIITTRD  LL  +R  RV   +EV+ L+  ++L L
Sbjct: 335 DDVNSLEQLKALAGELDWFGSGSRVIITTRDKHLLHVYRVERV---YEVEGLNRKEALQL 391

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
           F  NAF        + ++S  V+ Y+ G+PLA++++GS L G +  EWESA++   R+PH
Sbjct: 392 FGCNAFKTQKIDQRYEDISKRVVLYSKGLPLAVEIIGSDLYGKTILEWESALDTYARIPH 451

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKS 429
            +IQ++L+VSYDGL + E+ IFLD ACFFKG     V N L   R FS    I  L+ KS
Sbjct: 452 ENIQEILRVSYDGLKEFEKEIFLDLACFFKGAKLSDVKNILCCGRGFSPDYAIQVLIDKS 511

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-SLPTGI-- 486
           L+   +  + MHD++++MG EIVR E+   PG+RSRLW  +DI  V  EN  S  T I  
Sbjct: 512 LIKFEDYSVKMHDMIEDMGREIVRLEAPSKPGERSRLWFSKDILHVFKENKGSDKTEIIM 571

Query: 487 -----------------NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
                            N+++LK L +      K    +  ++  L   +     LP+  
Sbjct: 572 LRLLKDKKVQCDRNALKNMENLKILVIEEACFSKGPNHLPKSLRVLKWCDYPESSLPADF 631

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            +  +LV LDL+        +  +   KSLR + LSGC  L+++P +I    +L+ L+L 
Sbjct: 632 -DPKKLVILDLS-MGHFTFRNQMIMKFKSLREMKLSGCKFLKQVP-DISGAPNLKKLHLD 688

Query: 590 E-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTSLK 638
             K+  K+  S+  L KL DL L  C  L+ LP    LP   ++  R+C SLK
Sbjct: 689 SCKNLVKVHDSVGLLKKLEDLNLNRCTSLRVLPHGINLPSLKTMSLRNCASLK 741



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 81/139 (58%), Gaps = 4/139 (2%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTN 542
           +   SL+E+ L GC  LK+ P+IS   N++ L L     + ++  S+G L +L DL+L  
Sbjct: 654 MKFKSLREMKLSGCKFLKQVPDISGAPNLKKLHLDSCKNLVKVHDSVGLLKKLEDLNLNR 713

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C+ L+ +   + NL SL+ ++L  C  L++ PE +  +E++ YL L++    ++P S++ 
Sbjct: 714 CTSLRVLPHGI-NLPSLKTMSLRNCASLKRFPEILEKMENITYLGLSDTGISELPFSIEL 772

Query: 603 LSKLSDLRLQNCKRLQSLP 621
           L  L++L +  C+ L  LP
Sbjct: 773 LEGLTNLTIDRCQELVELP 791



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 51/94 (54%), Gaps = 6/94 (6%)

Query: 476 LNENTSL---PTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSI 529
           LN  TSL   P GINL SLK + L  C++LKRFPEI     NI  L L +T I ELP SI
Sbjct: 711 LNRCTSLRVLPHGINLPSLKTMSLRNCASLKRFPEILEKMENITYLGLSDTGISELPFSI 770

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
             L  L +L +  C  L  + S +  L  L  +N
Sbjct: 771 ELLEGLTNLTIDRCQELVELPSSIFMLPKLETVN 804


>gi|40644189|emb|CAC95124.1| TIR/NBS/LRR protein [Populus deltoides]
          Length = 1147

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 255/712 (35%), Positives = 369/712 (51%), Gaps = 119/712 (16%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I TF DD +L RG EIS     AI+ SK
Sbjct: 35  PEGAYDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHFLRAIQESK 94

Query: 71  ISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDA-GYCPSLGWMGIF 128
           ISI +FS+GYASSRWCLNELV+IL+  K K GQIV+P+FY +DPSD      S     + 
Sbjct: 95  ISIAVFSKGYASSRWCLNELVEILKCKKRKTGQIVLPIFYDIDPSDVRKQNGSFAEAFVK 154

Query: 129 DIPTSESVLIE--------------GNVNDISKKLSDLFPSD------NK---------D 159
                E  L++               N+ND++      F  +      NK         +
Sbjct: 155 HEERFEEKLVKEWRKALEEAGNLSGWNLNDMANGHEAKFIKEIIKVVLNKLEPKYLYVPE 214

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            LVG++ + + I   L + + +   VGI G+ GIGKTTIA A+++ +   FEGS F+ +I
Sbjct: 215 HLVGMDQLARNIFDFLSAATDDVRIVGIHGMPGIGKTTIAQAVFNQLCYGFEGSCFLSSI 274

Query: 220 RDESEKVGGLANIH------------LNFE---------RRRLSRMKVLIVFYDLTDLKQ 258
            + S++V GL  +              NF+         + RL R +VL+V  D+  L+Q
Sbjct: 275 NERSKQVNGLVPLQKQLHHDILKQDVANFDCADRGKVLIKERLRRKRVLVVADDVAHLEQ 334

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L+G    F PGSRVIITTRD  LL+         +++++EL  ++SL LFSR+AF  
Sbjct: 335 LNALMGDRSWFGPGSRVIITTRDSNLLRE-----ADQIYQIEELKPDESLQLFSRHAFKD 389

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           + PA  ++ELS   + Y  G+PLAL+V+G+ L   +     S ++ L R+P+ DIQ  L 
Sbjct: 390 SKPAQDYIELSKKAVGYCGGLPLALEVIGALLYRKNRGRCVSEIDNLSRIPNQDIQGKLL 449

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTISNNK 437
           +SY  LD E Q  FLD ACFF G ++  V   L A CR + ++ +  L  +SL+ +    
Sbjct: 450 ISYHALDGELQRAFLDIACFFIGIEREYVTKVLGARCRPNPEVVLETLSERSLIQVFGET 509

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN----TSLPTGINLD---- 489
           ++MHDLL++MG E+V + S K PGKR+R+W+ ED + VL +     T +  G+ LD    
Sbjct: 510 VSMHDLLRDMGREVVCKASPKQPGKRTRIWNQEDAWNVLEQQKVRGTDVVKGLALDVRAS 569

Query: 490 SLKELYLGG-----CSNLKRFPEI-------------------SC------------NIE 513
             K L  G      C NL +   +                    C            N+ 
Sbjct: 570 EAKSLSAGSFAEMKCLNLLQINGVHLTGSLKLFSKELMWICWHECPLKYLPFDFTLDNLA 629

Query: 514 DLDLKETAIEEL--PSSIGNLSR-------------LVDLDLTNCSGLKSVSSRLCNLKS 558
            LD++ + ++EL     + N+ +             L  L+L  CS L  V   + NL S
Sbjct: 630 VLDMQYSNLKELWKGKKVRNMLQSPKFLQYVIYIYILEKLNLKGCSSLVEVHQSIGNLTS 689

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
           L  LNL GC +L+ LPE IGN++SLE LN++     EK+P SM  +  L +L
Sbjct: 690 LDFLNLEGCWRLKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESLIEL 741



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 20/147 (13%)

Query: 466 LWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEEL 525
           LW  + +  +L     L   I +  L++L L GCS+L                     E+
Sbjct: 641 LWKGKKVRNMLQSPKFLQYVIYIYILEKLNLKGCSSLV--------------------EV 680

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
             SIGNL+ L  L+L  C  LK++   + N+KSL  LN+SGC +LEKLPE +G++ESL  
Sbjct: 681 HQSIGNLTSLDFLNLEGCWRLKNLPESIGNVKSLETLNISGCSQLEKLPESMGDMESLIE 740

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           L     + E+  SS+ QL  +  L L+
Sbjct: 741 LLADGIENEQFLSSIGQLKHVRRLSLR 767



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 22/182 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIE--ELPSSIGNLSRLV 536
           +LP  I N+ SL+ L + GCS L++ PE   ++E L +L    IE  +  SSIG L  + 
Sbjct: 703 NLPESIGNVKSLETLNISGCSQLEKLPESMGDMESLIELLADGIENEQFLSSIGQLKHVR 762

Query: 537 DLDLTNCSGLKS----VSSRLCNLK-----------SLRRLNL--SGCLKLEKLPEEIGN 579
            L L   S        +S+ + NLK           S++RL L   G         +   
Sbjct: 763 RLSLRGYSSTPPSSSLISAGVLNLKRWLPTSFIQWISVKRLELPHGGLSDRAAKCVDFSG 822

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
           L +LE L+L    F  +PS +  LSKL  L ++ CK L S+P+LP     + A +C SL+
Sbjct: 823 LSALEVLDLIGNKFSSLPSGIGFLSKLKFLSVKACKYLVSIPDLPSSLDCLDASYCKSLE 882

Query: 639 TL 640
            +
Sbjct: 883 RV 884


>gi|225460020|ref|XP_002269704.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1156

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 276/721 (38%), Positives = 386/721 (53%), Gaps = 114/721 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS  SS    P   +DVFLSFRG+D R+NF  HL  AL +  I TF DDKL RG EI+P
Sbjct: 8   MASDYSS--STPRCTYDVFLSFRGEDTRNNFTDHLYTALVQRGINTFRDDKLRRGEEIAP 65

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
            L  AIE S+ SIV+FS+ YA SRWCL+EL KI+E + +Y QIV+P+FY VDP+D     
Sbjct: 66  ELLKAIEESRSSIVVFSKTYAHSRWCLDELAKIMECRREYRQIVLPIFYHVDPADVRKQT 125

Query: 116 ---------------------------AGYCPSLGWMGIFDIPTS---ESVLIEGNVNDI 145
                                      AGY    GW      P +   ES  IE  +N I
Sbjct: 126 GSFGEAFTSYEENWKNKAQRWREALTEAGYIA--GW------PINKGYESRPIEEIINHI 177

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            K+L+  F    K+ +VG+   ++E++S L     +   VGI+GIGGIGKTTIA  +Y++
Sbjct: 178 LKRLNPKFLPI-KEHMVGMYVHLEELKSLLKMQLDDVRMVGIYGIGGIGKTTIAKMVYND 236

Query: 206 ISSHFEGSYFMQNIRDESEKV------------GGLANIHLNFE---------RRRLSRM 244
           I   F G+ F++ +++ S+              G +   HL  E         + RL   
Sbjct: 237 ILCQFNGASFLEGVKNRSKCYNDQLQLLQELLHGIMEGGHLKLESINDGMNMIKGRLGSK 296

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KVL+VF D+ DL Q+  ++     F  GSR+IITTRD  LL  +    V   +E K L Y
Sbjct: 297 KVLVVFDDVDDLDQVRGIVANYKWFGGGSRIIITTRDKHLLDQYE---VHASYEAKVLCY 353

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
            D++ LFS +AF   +    ++E+SN +IKYA G+PLAL+VLGS L   +++EW+SA+ K
Sbjct: 354 EDAIELFSWHAFKVQNIREDYVEMSNSMIKYAQGLPLALEVLGSSLYNKTKDEWKSAIEK 413

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK+ P+  I  VLK+S DGLD  ++ IFL  ACFFKG  +  ++  LD     A+  I  
Sbjct: 414 LKKNPNKKINDVLKISLDGLDRTQREIFLHIACFFKGEAKDFILRILDD---HAEYDIGV 470

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN----- 479
           L  + L+TIS NK+ MHDL+Q+MG  I R++ +KDP K  RLW P+DI +  +       
Sbjct: 471 LCDRCLITISYNKVEMHDLIQQMGWTIDREKHLKDPSKWIRLWDPDDISKAFSAQEGMEQ 530

Query: 480 -------------------------------TSLPTGINLDSLKELYLGGCSNLKRFPEI 508
                                          T +P   ++ +L+EL L  C  LK+FPEI
Sbjct: 531 VEVISYDLSRSKEMQILGNLKIIDLSRSRLLTKMPELSSMPNLEELNLVCCERLKKFPEI 590

Query: 509 SCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
             N   +E + L  + I+E+PSSI  L  L  L L  C           NL+ LR +N +
Sbjct: 591 RENMGRLERVHLDCSGIQEIPSSIEYLPALEFLTLHYCRNFDKFPDNFGNLRHLRVIN-A 649

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
               +++LP EI N+ SL  L L E   +++P S+  L++L +L L+NCK L+SLP   C
Sbjct: 650 NRTDIKELP-EIHNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSIC 708

Query: 626 G 626
           G
Sbjct: 709 G 709



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 106/198 (53%), Gaps = 31/198 (15%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP  I  L SL  L L GCSNL  FPEI  ++EDL    L +T I ELP SI +L  L 
Sbjct: 702 SLPNSICGLKSLGVLNLNGCSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLE 761

Query: 537 DLDLTNC-------------SGLKSVSSRLC--------NLKS----LRRLNLSGC-LKL 570
            L+L NC             + L+S+  R C        NL+S    LRRL+L+GC L  
Sbjct: 762 HLELKNCENLVTLPDSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQWCLRRLDLAGCNLMK 821

Query: 571 EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI- 629
             +P ++  L  L +L+++E     IP+++ QLS L  LR+ +C+ L+ +PELP    I 
Sbjct: 822 GAIPSDLWCLSLLRFLDVSEIPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEIL 881

Query: 630 HARHCTSLKTLSNSSTLL 647
            A+ C  L TLS  S+ L
Sbjct: 882 EAQGCPHLGTLSTPSSPL 899



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 91/150 (60%), Gaps = 6/150 (4%)

Query: 500 SNLKRFPEIS--CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
           +++K  PEI    ++  L L ETAI+ELP SIG+L+ L +L+L NC  L+S+ + +C LK
Sbjct: 652 TDIKELPEIHNMGSLTKLFLIETAIKELPRSIGHLTELEELNLENCKNLRSLPNSICGLK 711

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           SL  LNL+GC  L   PE + ++E L  L L++    ++P S++ L  L  L L+NC+ L
Sbjct: 712 SLGVLNLNGCSNLVAFPEIMEDMEDLRELLLSKTPITELPPSIEHLKGLEHLELKNCENL 771

Query: 618 QSLPE----LPCGSSIHARHCTSLKTLSNS 643
            +LP+    L    S+  R+C+ L  L ++
Sbjct: 772 VTLPDSIGNLTHLRSLCVRNCSKLHNLPDN 801


>gi|359493210|ref|XP_002269168.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 992

 Score =  361 bits (927), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 271/748 (36%), Positives = 389/748 (52%), Gaps = 138/748 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MAS+S+S ++     +DVFL+FRG D R++F  HL + L +  + TF DD+ L RG+ I+
Sbjct: 1   MASASTSTHV---GIYDVFLNFRGADTRYHFTDHLYSELRKNDVRTFRDDEELERGDVIA 57

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P L  AIE S+ISIV+FSE YA SRWCL+ELVKI+E + +  QIV+PVFY VDPS     
Sbjct: 58  PGLLKAIEQSRISIVVFSENYAQSRWCLDELVKIIECRTEREQIVLPVFYHVDPSHVRKQ 117

Query: 116 -AGYCPSL-----------------------------GWMGIFDIPTSESVLIEGNVNDI 145
              Y  +                              GW  + +    ES +I+   N+I
Sbjct: 118 MGSYGEAFADHEKDADLKKREKIQKWRTALTETSNLSGWRLLDN--QYESDVIDDITNNI 175

Query: 146 SKKLS--DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIY 203
             +L+   L   +N   +VG+   +K++ S +         VGI GIGGIGKTTIA A+Y
Sbjct: 176 ITRLNPKSLHVGEN---IVGMSIRLKKLRSLINIDLNNVLVVGICGIGGIGKTTIAKALY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVGG-------------------LANIHLNFE--RRRLS 242
           + IS  FEG  F+ N+R+ S+   G                   ++N+H   +  ++ LS
Sbjct: 233 NVISYKFEGVSFLANVRENSKDDVGLLRLQQQLLDDIRKRKNQQISNVHEGMDAIKKVLS 292

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             +VL+V  D+ + KQ++ L+G+ D FV GSR++ITTRD   L  +   +  H  E++EL
Sbjct: 293 LKRVLVVLDDVDNCKQVENLVGKRDCFVRGSRILITTRDRHPLDAYGADKPYH--EIEEL 350

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           +  ++L LFS  AF  N     + +LSN ++KYA G+PL L+VLGS+L   +  +W+S +
Sbjct: 351 NSEEALQLFSLYAFKPNCHQEDYEDLSNHIVKYAKGLPLVLRVLGSHLCERTPNQWKSEL 410

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           +KL+R P  DIQ VLK+SY+GLD  +  IFLD ACFFKG D+  V   LD C   A+ G 
Sbjct: 411 HKLEREPVQDIQNVLKISYNGLDRTQGEIFLDIACFFKGQDKDFVSRILDGCDLYAESGF 470

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
           S L  +SL+TI +NKI MHDL+Q+MG  IVR++  K+PGK SRLW P+D++ VL  NT  
Sbjct: 471 SVLCDRSLITILDNKIHMHDLIQQMGWHIVREQYPKEPGKWSRLWEPKDVFHVLTRNTGT 530

Query: 483 PT--GINLD---------------SLKELYLGGCSNLKRFPEI----------------- 508
               GI LD                +K L L       ++  I                 
Sbjct: 531 KAIEGIFLDMSTSKQLQFTTKAFKRMKMLRLLKVHRDAKYDSIVNSLTPVEPSKVLLSQE 590

Query: 509 ---------SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSS-------R 552
                    S  +  L      +E LPS+      LV+L+L  CS +K +         +
Sbjct: 591 HFCRDFEFPSQELRYLHWDGYPMESLPSNF-YAENLVELNL-RCSNIKQLWETELLEKLK 648

Query: 553 LCNLKSLRRLN---------------LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           + +L   + LN               L GC+ LE LPE +GN+E+L  L L       +P
Sbjct: 649 VIDLSHCQHLNKIPNPSSVPNLEILTLKGCINLETLPENMGNMENLRQLYLNYTAILNLP 708

Query: 598 SSMKQLSKLSDLRLQ---NCKRLQSLPE 622
           SS++ L  L  L L+    C +L+ LPE
Sbjct: 709 SSIEHLKGLEYLSLECFSCCSKLEKLPE 736



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 7/107 (6%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK + L  C +L + P  S   N+E L LK    +E LP ++GN+  L  L L N +
Sbjct: 644 LEKLKVIDLSHCQHLNKIPNPSSVPNLEILTLKGCINLETLPENMGNMENLRQLYL-NYT 702

Query: 545 GLKSVSSRLCNLKSLRRLNL---SGCLKLEKLPEEIGNLESLEYLNL 588
            + ++ S + +LK L  L+L   S C KLEKLPE++ +L+ LE L+L
Sbjct: 703 AILNLPSSIEHLKGLEYLSLECFSCCSKLEKLPEDLKSLKRLETLSL 749


>gi|359489070|ref|XP_003633868.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 544

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 219/522 (41%), Positives = 300/522 (57%), Gaps = 57/522 (10%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVFLSFRG+D R+NF  HL   L R  I TF DDKL RG EI+  L  AIEGS+ SI++F
Sbjct: 22  DVFLSFRGEDTRYNFTDHLFENLKRMGINTFRDDKLERGEEIAQELLGAIEGSRFSIIVF 81

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL-- 122
           SE YA S+WCL+EL KI+E K +  Q V+PVFY VDPSD            A +  ++  
Sbjct: 82  SERYADSKWCLDELTKIMECKKEMDQKVLPVFYHVDPSDVRKQTGSFGKAFAKHGTTVDE 141

Query: 123 -----------------GWMGIFDIPTSESVLIEGNVNDISKKLS-DLFPSDNKDQLVGV 164
                            GW  I D    ES  IE     I KKL   L   D  D +VG+
Sbjct: 142 QKVKRWRAAMTEASSLSGWHVIKDYEY-ESKYIEEIAEVIRKKLDPKLLHVD--DDIVGI 198

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +  +KE++S + S   +   VGI+G GGIGKTTIA  +Y+ I   F G+ F++N+++   
Sbjct: 199 DFRLKELKSLINSQLHDVRVVGIYGTGGIGKTTIAKIVYNEIQCEFNGASFLENVKESFN 258

Query: 225 K-------------VGG----LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
           K             + G    L+NI   +N  +  L   KVLIV  D+   +Q++ L+G 
Sbjct: 259 KGCQLQLQQKLLQGIAGQKIELSNIDDGINMIKNTLGSKKVLIVTDDVDRREQLESLVGS 318

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            + F  G+ +I+TTRD QLL  + G  V   +EVK+L   +++ LF+++AF QN P   +
Sbjct: 319 RNWFGAGTTIIVTTRD-QLLLRYYGVDV--TYEVKKLDNVEAIELFNKHAFKQNAPKEDY 375

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
           + LSN ++ YA G+PLAL+VLGS L GM+ +EW+SA NKLK  P  +I  VL++SYD LD
Sbjct: 376 VTLSNSMVAYAQGLPLALKVLGSSLHGMTIDEWKSASNKLKNNPKKEINDVLRISYDMLD 435

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
             E+ +FLD ACFF+G D+  V   LD C   A   I  L  K L+TIS++ I MH+L+Q
Sbjct: 436 GSEKKVFLDIACFFEGEDKAFVSKILDGCNLHATYNIRVLCDKCLITISDSMIQMHNLIQ 495

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN 487
           +MG  I+R+E  +DP K SRLW   DIY   +   S+ +  N
Sbjct: 496 QMGWAIIREEYPEDPSKWSRLWDLNDIYDAFSRQKSVQSSKN 537


>gi|147828597|emb|CAN68630.1| hypothetical protein VITISV_003859 [Vitis vinifera]
          Length = 1500

 Score =  361 bits (926), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 271/746 (36%), Positives = 380/746 (50%), Gaps = 147/746 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +++VFLSFRG+D R NF  HL AAL ++ I TF  D   +G  I P+   A+E S+  +V
Sbjct: 250 EYEVFLSFRGQDTRQNFTDHLYAALYQKGIRTFRMDH-TKGEMILPTTLRAVEMSRCFLV 308

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSL------- 122
           I S+ YA S+WCL+EL +I+ES+ + G+IV PVFY V+PSD       Y  +L       
Sbjct: 309 ILSKNYAHSKWCLDELNQIMESRRQMGKIVFPVFYHVNPSDVRNQGESYGEALANHERKI 368

Query: 123 ---------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                          G +  + I    ES  I      I  K S      +K+ L+G++ 
Sbjct: 369 PLEYTQKLRAALREVGNLSGWHIQNGFESDFIXDITRVILMKFSQKLLQVDKN-LIGMDY 427

Query: 167 IIKEIES---QLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
            ++++E    Q++   S   + VGI+G GGIGKTT+A  +Y+ I + F  + F+ N+R++
Sbjct: 428 RLEDMEEIFPQIIDPLSNNVHMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVRED 487

Query: 223 SEKVGGL----------------------ANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           S+  G L                        IH+   + RL   KVL+V  D+ DL Q++
Sbjct: 488 SKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMI--KDRLCFKKVLLVLDDVDDLNQLE 545

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G  + F PGSR+I+TTRD  LL+ H    +   +E K+L + +++ LF  NAF QNH
Sbjct: 546 ALAGDHNWFGPGSRIIVTTRDKHLLEVHEXDAL---YEAKKLDHKEAVELFCWNAFKQNH 602

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   +  LSN V+ Y NG+PL L+VLG +L G +  +WES + KL+R P+ +IQ+VLK S
Sbjct: 603 PKEDYETLSNSVVHYVNGLPLGLKVLGCFLYGKTVCQWESELQKLQREPNQEIQRVLKRS 662

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           YD LD  +Q IFLD ACFF G D+  V  FLDAC F A+ GI  L  K  +TI +NKI M
Sbjct: 663 YDVLDYTQQQIFLDVACFFNGEDKDFVTRFLDACNFYAESGIGVLGDKCFITILDNKIWM 722

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL---------NENT----------- 480
           HDLLQ+MG +IVRQE  KDPGK SRL +PE + +VL         NE+T           
Sbjct: 723 HDLLQQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRKXVRTNANESTFMXKDLEXAFT 782

Query: 481 ------------------------------SLPTGINLDSLKELYLGGC-SNLKRFPEIS 509
                                         SLP     + L EL +  C S+LKR  E  
Sbjct: 783 REDNKVKLSKDFEFPSYELRYLHWHGYPLESLPXXFYAEDLVELDM--CYSSLKRLWEGD 840

Query: 510 CNIEDLDLKETA-------IEELPSSIGNLSRLVDLDLTNCSGLKSVS------------ 550
             +E L+    +       I ++  S  NL +L+   L  CS L  V             
Sbjct: 841 LLLEKLNTIRVSCSQHLIEIPDITVSAPNLQKLI---LDGCSSLLEVHPSIGKLNKLILL 897

Query: 551 -----------SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
                        + ++K+L  LN SGC  L+K P   GN+E+L  L LA    E++PSS
Sbjct: 898 NLKNCKKLICFPSIIDMKALEILNFSGCSGLKKFPNIQGNMENLFELYLASTAIEELPSS 957

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELPC 625
           +  L+ L  L L+ CK L+SLP   C
Sbjct: 958 IGHLTGLVLLDLKWCKNLKSLPTSIC 983



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 72/102 (70%), Gaps = 1/102 (0%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF G+D RHNF  HL  AL ++ I TF D K L RG EI+  L  AIE S+I ++
Sbjct: 27  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDHKELRRGEEIATELLKAIEESRICVI 86

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           I S+ YA SRWCL+ELVKI+E K   GQ+V P+FY VDPS+ 
Sbjct: 87  ILSKNYARSRWCLDELVKIMEWKQCMGQLVFPIFYQVDPSNV 128



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 97/162 (59%), Gaps = 10/162 (6%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
             P+ I++ +L+ L   GCS LK+FP I  N+E   +L L  TAIEELPSSIG+L+ LV L
Sbjct: 908  FPSIIDMKALEILNFSGCSGLKKFPNIQGNMENLFELYLASTAIEELPSSIGHLTGLVLL 967

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            DL  C  LKS+ + +C LKSL  L+LSGC KL   PE   N++ L+ L L     E +PS
Sbjct: 968  DLKWCKNLKSLPTSICKLKSLENLSLSGCSKLGSFPEVTENMDKLKELLLDGTPIEVLPS 1027

Query: 599  SMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            S+ +L  L  L L+ CK L SL    C       + TSL+TL
Sbjct: 1028 SIDRLKGLVLLNLRKCKNLVSLSNGMC-------NLTSLETL 1062



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 78/141 (55%), Gaps = 4/141 (2%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLPT I  L SL+ L L GCS L  FPE++ N++ L    L  T IE LPSSI  L  LV
Sbjct: 977  SLPTSICKLKSLENLSLSGCSKLGSFPEVTENMDKLKELLLDGTPIEVLPSSIDRLKGLV 1036

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L+L  C  L S+S+ +CNL SL  L +SGC +L  LP  +G+L+ L  L+       + 
Sbjct: 1037 LLNLRKCKNLVSLSNGMCNLTSLETLVVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQP 1096

Query: 597  PSSMKQLSKLSDLRLQNCKRL 617
            P S+  L  L  L    CK L
Sbjct: 1097 PDSIVLLRNLQVLIYPGCKIL 1117



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 96/213 (45%), Gaps = 34/213 (15%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRL 535
             SL  G+ NL SL+ L + GCS L   P    +++    L    TAI + P SI  L  L
Sbjct: 1047 VSLSNGMCNLTSLETLVVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNL 1106

Query: 536  VDLDLTNCSGLKSVS-----------SRLCNLKSLR------------RLNLSGCLKLE- 571
              L    C  L   S               N   LR             L+LS C  +E 
Sbjct: 1107 QVLIYPGCKILAPTSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDLSDCKLIEG 1166

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
             +P  I +L SL+ L+L++ +F  IP+ + +L+ L DLRL  C+ L  +PELP     I 
Sbjct: 1167 AIPNGICSLISLKKLDLSQNNFLSIPAGISELTNLEDLRLGQCQSLTGIPELPLSLRDID 1226

Query: 631  ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
            A +CT+L  L  SS++ T        F F NCS
Sbjct: 1227 AHNCTAL--LPGSSSVSTLQGLQ---FLFYNCS 1254


>gi|359495272|ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1003

 Score =  361 bits (926), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 264/718 (36%), Positives = 376/718 (52%), Gaps = 109/718 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEIS 59
           MA++ SS        +DVFLSFRG D R+NF +HL   L  + I TF D DKL +G  IS
Sbjct: 1   MAAAFSS----SQKSYDVFLSFRGDDTRNNFTAHLLQELRTKGINTFFDEDKLEKGRVIS 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L +AIE S  SI++ SE YASSRWCL E+VKILE      + V+P+FY VDPSD    
Sbjct: 57  PALITAIENSMFSIIVLSENYASSRWCLEEMVKILECNRSKEERVLPIFYNVDPSDVRNH 116

Query: 116 -AGYCPSLG---------------WM----------GIFDIPTSESVLIEGNVNDISKKL 149
              +  +L                W           G      +E +LI+  V  + KKL
Sbjct: 117 MGKFGEALAKHEENLEENGERVKIWRDALTEVANLSGWDSRNKNEPLLIKEIVIKLLKKL 176

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
            + + SD ++ LVG++S I+++   L   S +   VGI G+GGIGKTT+A AIYS +S+ 
Sbjct: 177 LNTWTSDTEENLVGIQSRIQKLRMLLCLQSDDVRMVGICGMGGIGKTTLARAIYSQVSNQ 236

Query: 210 FEGSYFM--------------------QNIRDESEKVGGLANIHLNFERRRLSRMKVLIV 249
           FE   F+                    Q +++E+ K+ G  +I     + RL   KVL+V
Sbjct: 237 FEACSFLEIANDFKEQDLTSLAEKLLSQLLQEENLKIKGSTSI-----KARLHSRKVLVV 291

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             ++ +L  ++ L G  D F  GSR+I+TTRD +LL  H+       +EV E + +++  
Sbjct: 292 LDNVNNLTILEHLAGNQDWFGQGSRIIVTTRDQRLLIQHKVD----YYEVAEFNGDEAFE 347

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
               ++           ELS  +I YA G+PLAL+VLGS L GM+++EW   + KLK  P
Sbjct: 348 FLKHHSLKYELLENDLQELSREIIFYAKGLPLALRVLGSLLFGMNKDEWRDYLVKLKSTP 407

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           +++IQ+VL++SYD LDDEE+NIFLD ACFFKG D+  V+  L  C FSAK GI  L+ KS
Sbjct: 408 NIEIQEVLRLSYDRLDDEEKNIFLDIACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKS 467

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI 486
           L+TI+  NK+ MHDL+QEMG  IVRQE  K+P +RSRLW  EDI+ VL  N  +    GI
Sbjct: 468 LITINFANKLEMHDLIQEMGKGIVRQECPKEPERRSRLWEHEDIFDVLKRNMGSEKIEGI 527

Query: 487 NLD----------------SLKELYLGGCSNLK----------------------RFPEI 508
            L+                 +K+L L    N K                       F   
Sbjct: 528 FLNLSHLEDTLDFTIEAFAGMKKLRLLKVYNSKSISRDFRDTFNNKVNCRVRFAHEFKFC 587

Query: 509 SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
           S ++  L     +++ LP        LV+L +   S +K +   +  L+ L+ ++LS   
Sbjct: 588 SNDLRYLYWHGYSLKSLPKDFSP-KHLVELSMP-YSHIKKLWKGIKVLERLKSIDLSHSK 645

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            L + P+  G + +LE L L    +  K+  S+  L KL+ L L+NC  L+ LP   C
Sbjct: 646 YLIQTPDFSG-ITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTC 702



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 94/186 (50%), Gaps = 38/186 (20%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK + L     L + P+ S   N+E L L+    + ++  S+G L +L  L L NC+
Sbjct: 633 LERLKSIDLSHSKYLIQTPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCT 692

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE----------------------- 581
            L+ + S  C+LKSL    LSGC K E+ PE  GNLE                       
Sbjct: 693 MLRRLPSSTCSLKSLETFILSGCSKFEEFPENFGNLEMLKELHADGIVNLDLSYCNISDG 752

Query: 582 ----------SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
                     SLE+LNL+  +F  +P+ M  LS L  LRL NCKRL++L +LP    S++
Sbjct: 753 ANVSGLGFLVSLEWLNLSGNNFVTLPN-MSGLSHLETLRLGNCKRLEALSQLPSSIRSLN 811

Query: 631 ARHCTS 636
           A++CTS
Sbjct: 812 AKNCTS 817


>gi|147853075|emb|CAN83385.1| hypothetical protein VITISV_004581 [Vitis vinifera]
          Length = 1024

 Score =  360 bits (925), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 264/718 (36%), Positives = 376/718 (52%), Gaps = 109/718 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEIS 59
           MA++ SS        +DVFLSFRG D R+NF +HL   L  + I TF D DKL +G  IS
Sbjct: 1   MAAAFSS----SQKSYDVFLSFRGDDTRNNFTAHLLQELRTKGINTFFDEDKLEKGRVIS 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L +AIE S  SI++ SE YASSRWCL E+VKILE      + V+P+FY VDPSD    
Sbjct: 57  PALITAIENSMFSIIVLSENYASSRWCLEEMVKILECNRSKEERVLPIFYNVDPSDVRNH 116

Query: 116 -AGYCPSLG---------------WM----------GIFDIPTSESVLIEGNVNDISKKL 149
              +  +L                W           G      +E +LI+  V  + KKL
Sbjct: 117 MGKFGEALAKHEENLEENGERVKIWRDALTEVANLSGWDSRNKNEPLLIKEIVIKLLKKL 176

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
            + + SD ++ LVG++S I+++   L   S +   VGI G+GGIGKTT+A AIYS +S+ 
Sbjct: 177 LNTWTSDTEENLVGIQSRIQKLRMLLCLQSDDVRMVGICGMGGIGKTTLARAIYSQVSNQ 236

Query: 210 FEGSYFM--------------------QNIRDESEKVGGLANIHLNFERRRLSRMKVLIV 249
           FE   F+                    Q +++E+ K+ G  +I     + RL   KVL+V
Sbjct: 237 FEACSFLEIANDFKEQDLTSLAEKLLSQLLQEENLKIKGSTSI-----KARLHSRKVLVV 291

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             ++ +L  ++ L G  D F  GSR+I+TTRD +LL  H+       +EV E + +++  
Sbjct: 292 LDNVNNLTILEHLAGNQDWFGQGSRIIVTTRDQRLLIQHKVD----YYEVAEFNGDEAFE 347

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
               ++           ELS  +I YA G+PLAL+VLGS L GM+++EW   + KLK  P
Sbjct: 348 FLKHHSLKYELLENDLQELSREIIFYAKGLPLALRVLGSLLFGMNKDEWRDYLVKLKSTP 407

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           +++IQ+VL++SYD LDDEE+NIFLD ACFFKG D+  V+  L  C FSAK GI  L+ KS
Sbjct: 408 NIEIQEVLRLSYDRLDDEEKNIFLDIACFFKGEDKDHVVEILKGCGFSAKCGIKTLINKS 467

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI 486
           L+TI+  NK+ MHDL+QEMG  IVRQE  K+P +RSRLW  EDI+ VL  N  +    GI
Sbjct: 468 LITINFANKLEMHDLIQEMGKGIVRQECPKEPERRSRLWEHEDIFDVLKRNMGSEKIEGI 527

Query: 487 NLD----------------SLKELYLGGCSNLK----------------------RFPEI 508
            L+                 +K+L L    N K                       F   
Sbjct: 528 FLNLSHLEDTLDFTIEAFAGMKKLRLLKVYNSKSISRDFRDTFNNKVNCRVRFAHEFKFC 587

Query: 509 SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
           S ++  L     +++ LP        LV+L +   S +K +   +  L+ L+ ++LS   
Sbjct: 588 SNDLRYLYWHGYSLKSLPKDFSP-KHLVELSMPY-SHIKKLWKGIKVLERLKSIDLSHSK 645

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            L + P+  G + +LE L L    +  K+  S+  L KL+ L L+NC  L+ LP   C
Sbjct: 646 YLIQTPDFSG-ITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTC 702



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK + L     L + P+ S   N+E L L+    + ++  S+G L +L  L L NC+
Sbjct: 633 LERLKSIDLSHSKYLIQTPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCT 692

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
            L+ + S  C+LKSL    LSGC K E+ PE  GNLE L+ L+
Sbjct: 693 MLRRLPSSTCSLKSLETFILSGCSKFEEFPENFGNLEMLKELH 735



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 5/137 (3%)

Query: 489 DSLKELYLGGCSNLKRFPE--ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           + L+ LY  G S LK  P+     ++ +L +  + I++L   I  L RL  +DL++   L
Sbjct: 589 NDLRYLYWHGYS-LKSLPKDFSPKHLVELSMPYSHIKKLWKGIKVLERLKSIDLSHSKYL 647

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSK 605
              +     + +L RL L GC+ L K+   +G L+ L +L+L       ++PSS   L  
Sbjct: 648 IQ-TPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNCTMLRRLPSSTCSLKS 706

Query: 606 LSDLRLQNCKRLQSLPE 622
           L    L  C + +  PE
Sbjct: 707 LETFILSGCSKFEEFPE 723


>gi|224127726|ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1203

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 260/742 (35%), Positives = 371/742 (50%), Gaps = 129/742 (17%)

Query: 1   MASSSSSINMIPHP----------KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD 50
           MA++SS  N    P           + VFLSFRG+D R NF  HL + L R K+  F DD
Sbjct: 1   MAATSSRCNTTSPPFSPTQNNCKWTYHVFLSFRGEDTRKNFTGHLYSGLSRFKLLVFKDD 60

Query: 51  -KLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFY 109
            KL +G  I+P L  AIE S  S+++ S+ YASS WCL+EL KI+E  ++ GQ + PVFY
Sbjct: 61  EKLEKGKVIAPELLKAIEQSMFSVIVLSKNYASSSWCLDELAKIIECGDQKGQKIFPVFY 120

Query: 110 LVDPSD------------------------------AGYCPSLGWMGIFDIPTSESVLIE 139
            V+PSD                              A         G      +ES +IE
Sbjct: 121 DVEPSDVRKQTGSFQDDFAKHEEKYRENIDKVRKWRAAMTQVANLSGWTSKNRNESEIIE 180

Query: 140 GNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIA 199
             V  I  +LS  F S ++D LVG++S ++ +   L  G  +   +GI G+GGIGK+TIA
Sbjct: 181 EIVQKIDYELSQTFSSVSED-LVGIDSRVRVVSDMLFGGQNDVRIIGICGMGGIGKSTIA 239

Query: 200 SAIYSNISSHFEGSYFMQNIRDESEKVG-------------------------GLANIHL 234
             +Y  I   FEGS F+ N+R+  EK G                         G+A I  
Sbjct: 240 RVVYDKIRCEFEGSCFLANVREGFEKHGAVPLQKQLLSEILREKSPKIWDPEKGIAEI-- 297

Query: 235 NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
              + RL   KVL++  D+ +LKQ+  L      F+PGSR+IIT+RD  LL  H    V 
Sbjct: 298 ---KNRLQNRKVLVILDDVDNLKQLHFLAVDWKWFLPGSRIIITSRDKNLLSTH---AVD 351

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
            ++E +EL+ +D+L L SR AF ++ P  G+ EL   V+ +A G+PLA +VL S L G S
Sbjct: 352 GIYEAEELNDDDALVLLSRKAFKKDQPIEGYWELCKSVLGHARGLPLAARVLASSLCGRS 411

Query: 355 EEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC 414
            + WES + +L  +P+ D+  VLK+S+DGL++ E+ +FLD ACFFKG ++  V   L+ C
Sbjct: 412 MDFWESFIKRLNEIPNRDVMAVLKLSFDGLEELEKKLFLDIACFFKGMNKDQVTRILNQC 471

Query: 415 RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
            F A  GI  L  KSL+ +SN+ ++MHDLLQ MG E+VRQES  +PG+RSRLW  +D++ 
Sbjct: 472 GFHANYGIQILQDKSLICVSNDTLSMHDLLQAMGREVVRQESTAEPGRRSRLWASKDVFH 531

Query: 475 VLNENTSLP--TGINLD-SLKELYLGGCSNLKR-------FPEISCNIEDLDLKETAIEE 524
           VL +NT       I LD +  E   G     KR       F ++S  +  L ++    + 
Sbjct: 532 VLGKNTGTEEIESIALDWANPEDVEGTMQKTKRSAWNTGVFSKMS-RLRLLRIRNACFDS 590

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKS-------VSSRLC--NLKSLR--------------- 560
            P  + N  R ++        L S       V   LC  NL+ LR               
Sbjct: 591 GPEYLSNELRFLEWRNYPSKYLPSSFQPENLVEVHLCYSNLRQLRLGNKILDSLKVIDLS 650

Query: 561 ------------------RLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMK 601
                             RL L GC +L ++   IG+   L Y+NL + +    +PS + 
Sbjct: 651 YSEYLIKTPNFTGIPNLERLILQGCRRLSEVHSSIGHHNKLIYVNLMDCESLTSLPSRIS 710

Query: 602 QLSKLSDLRLQNCKRLQSLPEL 623
            L+ L +L L  C +L+  PE+
Sbjct: 711 GLNLLEELHLSGCSKLKEFPEI 732



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 82/139 (58%), Gaps = 4/139 (2%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRL 535
           TSLP+ I+ L+ L+EL+L GCS LK FPEI  N   +  L L +T+IEELP SI  L  L
Sbjct: 703 TSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELPPSIQYLVGL 762

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
           + L L +C  L  + S +  LKSL+ L+LSGC +LE LPE  G LE L  L+++     +
Sbjct: 763 ISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENLPENFGQLECLNELDVSGTAIRE 822

Query: 596 IPSSMKQLSKLSDLRLQNC 614
            P S+  L  L  L    C
Sbjct: 823 PPVSIFSLKNLKILSFHGC 841



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 98/198 (49%), Gaps = 32/198 (16%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
           + LP+ IN L SLK L+L GCS L+  PE    + C + +LD+  TAI E P SI +L  
Sbjct: 774 SCLPSSINGLKSLKTLHLSGCSELENLPENFGQLEC-LNELDVSGTAIREPPVSIFSLKN 832

Query: 535 LVDLDLTNCS----GLKSVSSRLC--------------------NLKSLRRLNLSGC-LK 569
           L  L    C+       ++  RL                      L SL RL LS C L 
Sbjct: 833 LKILSFHGCAESSRSTTNIWQRLMFPLMPGKRANSTSLVLPSLSGLSSLTRLGLSNCNLG 892

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SS 628
              +P +IG L SL  LNL+   F  +P+S+ QLS L  LR+++CK LQSLPELP     
Sbjct: 893 EGAVPNDIGYLSSLRQLNLSRNKFVSLPTSIDQLSGLQFLRMEDCKMLQSLPELPSNLEE 952

Query: 629 IHARHCTSLKTLSNSSTL 646
                CTSL+ +  S  L
Sbjct: 953 FRVNGCTSLEKMQFSRKL 970



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 7/160 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           LDSLK + L     L + P  +   N+E L L+    + E+ SSIG+ ++L+ ++L +C 
Sbjct: 641 LDSLKVIDLSYSEYLIKTPNFTGIPNLERLILQGCRRLSEVHSSIGHHNKLIYVNLMDCE 700

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L S+ SR+  L  L  L+LSGC KL++ PE  GN + L  L L +   E++P S++ L 
Sbjct: 701 SLTSLPSRISGLNLLEELHLSGCSKLKEFPEIEGNKKCLRKLCLDQTSIEELPPSIQYLV 760

Query: 605 KLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTL 640
            L  L L++CK+L  LP     L    ++H   C+ L+ L
Sbjct: 761 GLISLSLKDCKKLSCLPSSINGLKSLKTLHLSGCSELENL 800


>gi|356506795|ref|XP_003522161.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1088

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 262/703 (37%), Positives = 379/703 (53%), Gaps = 103/703 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           +++VF+SFRG+D R  F SHL AAL    I  F DD+ L RG++IS SL  AIE S+IS+
Sbjct: 11  RYEVFMSFRGEDTRATFTSHLYAALQNAGIIVFKDDESLPRGDQISDSLLLAIEQSQISV 70

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP-------------------- 113
           V+FS  YA SRWCL EL KI+  K   GQ+V+PVFY VDP                    
Sbjct: 71  VVFSTNYADSRWCLQELEKIMNCKRTIGQVVLPVFYDVDPSQVRYQTGHFGESFQNLSNR 130

Query: 114 --------------SDAGYCPSL----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPS 155
                         SD  Y  S      W  +     S + ++  N  + S+ + ++  +
Sbjct: 131 ILKDDDEKAVGEGESDKEYMMSRVLISRWRKVLREAASIAGVVVLNSRNESETIKNIVEN 190

Query: 156 DNK----------DQLVGVESIIKEIESQL-----LSGSTEFNTVGIWGIGGIGKTTIAS 200
             +          D  VGVES ++++  +L      S S +   +GIWG+GGIGKTTIA 
Sbjct: 191 VTRLLDKIELPLVDNPVGVESRVQDMIERLDLNHKQSNSNDVLLLGIWGMGGIGKTTIAK 250

Query: 201 AIYSNISSHFEGSYFMQNI----RDESEKVG------------GLANIHLNFE--RRRLS 242
           AIY+ I  +FEG  F++ I    R ++ +               + N+ L  +  + RL 
Sbjct: 251 AIYNKIGRNFEGRSFLEQIGELWRQDAIRFQEQLLFDIYKTKRKIHNVELGKQALKERLC 310

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             +V +V  D+ D++Q+  L G  + F  GSR+IITTRD  +L   RG RV  ++ +KE+
Sbjct: 311 SKRVFLVLDDVNDVEQLSALCGSREWFGSGSRIIITTRDKHIL---RGDRVDKMYTMKEM 367

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
             ++S+ LFS +AF Q  P  GF ELSN VI+Y+ G+PLAL VLG +L  M   EW++ +
Sbjct: 368 DESESIELFSWHAFKQASPREGFTELSNDVIEYSGGLPLALTVLGCHLFDMKIIEWKTVL 427

Query: 363 NKLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
           +KLKR+PH  +QK LK+SYDGL DD E++IFLD ACFF G D+   M  L+ C   A+ G
Sbjct: 428 DKLKRIPHDQVQKKLKISYDGLSDDTERDIFLDIACFFIGMDRNDAMCILNGCGLFAENG 487

Query: 422 ISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           I  LV +SLVT+ + NK+ MHDLL++MG EI+R +S KD  +RSRLW  ED+  VL + T
Sbjct: 488 IRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRAKSPKDLEERSRLWFNEDVLDVLAKKT 547

Query: 481 SLPT--GINL------------DSLKE------LYLGGCSNLKRFPEISCNIEDLDLKET 520
              T  G+ L            ++ KE      L L G      F  +S ++  L     
Sbjct: 548 GTKTIEGLALKLPLTNSNCFSTEAFKEMKKLRLLQLAGVQLDGDFEYLSKDLRWLCWNGF 607

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
            ++ +P +    S LV ++L N S +K V      ++ L+ LNLS    L + P +  NL
Sbjct: 608 PLKCIPKNFHQGS-LVSIELEN-SNVKLVWKEAQLMEKLKILNLSHSHNLTQTP-DFSNL 664

Query: 581 ESLEYLNLAE--KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +LE L L +  + FE +  ++  L+K+  + L++C  L SLP
Sbjct: 665 PNLEKLVLIDCPRLFE-VSHTVGHLNKILMINLKDCISLHSLP 706



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK L L    NL + P+ S   N+E L L +   + E+  ++G+L++++ ++L +C 
Sbjct: 641 MEKLKILNLSHSHNLTQTPDFSNLPNLEKLVLIDCPRLFEVSHTVGHLNKILMINLKDCI 700

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L S+   +  LKSL+ L LSGCLK++KL E++  +ESL  L        K+P S+
Sbjct: 701 SLHSLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLMTLIADNTAITKVPFSI 756


>gi|37781278|gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1121

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 257/696 (36%), Positives = 374/696 (53%), Gaps = 92/696 (13%)

Query: 9   NMIPHPK-----HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
           +++P P+     +DVFLSFRG++VR  FV HL  AL ++ I TF DD KL +G  ISP L
Sbjct: 6   SLLPSPEIIRWSYDVFLSFRGENVRKTFVDHLYLALEQKCINTFKDDEKLEKGKFISPEL 65

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL 122
            S+IE S+I+++IFS+ YA+S WCL+EL KI+E KN  GQIVVPVFY VDPS      ++
Sbjct: 66  MSSIEESRIALIIFSKNYANSTWCLDELTKIIECKNVKGQIVVPVFYDVDPSTVRRQKNI 125

Query: 123 ------------------GWMGI---------FDIPTS----ESVLIEGNVNDISKKLSD 151
                              W            +D+P +    E+ +IE    DI  +L  
Sbjct: 126 FGEAFSKHEARFEEDKVKKWRAALEEAANISGWDLPNTSNGHEARVIEKITEDIMVRLGS 185

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
              + N   +VG+ES + ++   L  GS     +GI G+ G+GKTT+A  IY NI S FE
Sbjct: 186 QRHASNARNVVGMESHMHQVYKMLGIGSGGVRFLGILGMSGVGKTTLARVIYDNIQSQFE 245

Query: 212 GSYFMQNIRDESEKVG--GLANIHL------------------NFERRRLSRMKVLIVFY 251
           G+ F+  +RD S K G   L  I L                  N +++RL   KVL+V  
Sbjct: 246 GACFLHEVRDRSAKQGLEHLQEILLSEILVVKKLRINDSFEGANMQKQRLQYKKVLLVLD 305

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+  + Q++ L G  + F  GSR+IITT+D  LL  +   ++   + +  L   +SL LF
Sbjct: 306 DVDHIDQLNALAGEREWFGDGSRIIITTKDKHLLVKYETEKI---YRMGTLDKYESLQLF 362

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
            ++AF +NH    F +LS  VI++  G+PLAL+VLGS+L G   +EW S V +LK++P  
Sbjct: 363 KQHAFKKNHSTKEFEDLSAQVIEHTGGLPLALKVLGSFLYGRGLDEWISEVERLKQIPQN 422

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           +I K L+ S+ GL++ EQ IFLD ACFF G  +  V   L++  FS  IGI  L+ K L+
Sbjct: 423 EILKKLEPSFTGLNNIEQKIFLDIACFFSGKKKDSVTRILESFHFSPVIGIKVLMEKCLI 482

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGIN 487
           TI   +IT+H L+QEMG  IVR+E+  +P   SRLW  EDI  VL +N          ++
Sbjct: 483 TILKGRITIHQLIQEMGWHIVRREASYNPRICSRLWKREDICPVLEQNLCTDKIEGMSLH 542

Query: 488 LDSLKELYLGGCSNLK----RF-----------PE-ISCNIEDLDLKETAIEELPSSIGN 531
           L + +E+  GG + ++    RF           PE +   +  LD      + LP+S   
Sbjct: 543 LTNEEEVNFGGKALMQMTSLRFLKFRNAYVYQGPEFLPDELRWLDWHGYPSKNLPNSFKG 602

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESL---EYL 586
             +LV L L   S +  +     +L  L+ +NLS   KL ++P+     NLE L   E  
Sbjct: 603 -DQLVSLKLKK-SRIIQLWKTSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECT 660

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +L E +F     S+  L KL  L L+NC+ L+++P+
Sbjct: 661 SLVEINF-----SIGDLGKLVLLNLKNCRNLKTIPK 691



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 82/140 (58%), Gaps = 3/140 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVD 537
           ++P  I L+ L+ L L GCS L+ FPEI      + +L L  T++ ELP+S+ N S +  
Sbjct: 688 TIPKRIRLEKLEVLVLSGCSKLRTFPEIEEKMNRLAELYLGATSLSELPASVENFSGVGV 747

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           ++L+ C  L+S+ S +  LK L+ L++SGC KL+ LP+++G L  +E L+      + IP
Sbjct: 748 INLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGIEKLHCTHTAIQTIP 807

Query: 598 SSMKQLSKLSDLRLQNCKRL 617
           SSM  L  L  L L  C  L
Sbjct: 808 SSMSLLKNLKHLSLSGCNAL 827



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDL 540
           T  +L  LK + L     L R P+ S   N+E L L+E T++ E+  SIG+L +LV L+L
Sbjct: 621 TSKDLGKLKYMNLSHSQKLIRMPDFSVTPNLERLVLEECTSLVEINFSIGDLGKLVLLNL 680

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK++  R+  L+ L  L LSGC KL   PE    +  L  L L      ++P+S+
Sbjct: 681 KNCRNLKTIPKRI-RLEKLEVLVLSGCSKLRTFPEIEEKMNRLAELYLGATSLSELPASV 739

Query: 601 KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLT 648
           +  S +  + L  CK L+SLP     L C  ++    C+ LK L +   LL 
Sbjct: 740 ENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLV 791


>gi|357514699|ref|XP_003627638.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521660|gb|AET02114.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1184

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 269/699 (38%), Positives = 386/699 (55%), Gaps = 110/699 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF+SFRG+D R NF S L+AALC+  IET+ID ++ +G E+   L  AI+ S + +V
Sbjct: 14  KHDVFISFRGEDTRTNFTSFLHAALCKNHIETYIDYRIEKGEEVWEELERAIKASALFLV 73

Query: 75  IFSEGYASSRWCLNELVKILESK--NKYGQIVVPVFYLVDPSD-----AGYCPSLG---- 123
           +FSE YASS WCLNELV+I++ K  ++   +V+PVFY ++PS        Y  +L     
Sbjct: 74  VFSENYASSTWCLNELVEIMKCKKNDEDNVVVIPVFYRIEPSHVRKQTGSYHTALAKQKK 133

Query: 124 --------W---------MGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                   W         +  FD  T  +ES LI   +  + +KL+  + ++ +   +  
Sbjct: 134 QGKDKIQRWKNALFEVANLSGFDSSTYRTESDLIGDIIKAVLQKLNQKYTNELRCLFIPD 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           E     IES L   S E  T+GIWG+GGIGKTT+A+AI+  +SS +EGS F++N+ +ES+
Sbjct: 194 EDY-SSIESFLKDDSREVRTIGIWGMGGIGKTTLAAAIFQKVSSRYEGSCFLENVTEESK 252

Query: 225 KVGGLA-------------NIHLNFER-------RRLSRMKVLIVFYDLTDLKQIDLLIG 264
           +  GL+             ++H+   +       +RL RMK  IV  D+  L+ ++ LIG
Sbjct: 253 R-HGLSYTYNRLLSKLLGEDLHIETPKVISSMVMKRLKRMKAFIVLDDVRILELLNNLIG 311

Query: 265 R-LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
              D    GSRVI+TTRD  +L    G  +  + EV++++  +S+ LFS NAF +  P  
Sbjct: 312 AGHDCLGAGSRVIVTTRDKYVLT---GGGIDEIHEVEKMNSQNSIRLFSLNAFNKILPNE 368

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           G+ E+SN V+ Y  G PLAL+VLGS+L+  S++EW SA+NKLK++P+ +IQKVL++SYD 
Sbjct: 369 GYEEISNNVVSYTEGNPLALKVLGSFLRTKSKKEWNSALNKLKKIPNAEIQKVLRLSYDE 428

Query: 384 LDDEEQNIFLDTACFFKG-NDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMH 441
           LDD E++IFLD ACFFKG      V   L+ C F A IGI  L+ K+LVTI S N I MH
Sbjct: 429 LDDTEKDIFLDIACFFKGCGRSSRVTKILNVCDFFADIGIRNLLNKALVTITSTNDIQMH 488

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD-------SLK 492
           DLLQEMG +IVR+ESIK+PG+RSRLW+  +I  VL  N  TS    I LD       +L 
Sbjct: 489 DLLQEMGRQIVREESIKNPGQRSRLWNASEICDVLTNNNGTSAVESICLDMDQITRINLS 548

Query: 493 ELYLGGCSNLK-----------------RFPE----ISCNIEDLDLKETAIEELPSSIGN 531
                   NL+                   PE    +  N+   +     +  LPS+   
Sbjct: 549 SKAFTKMPNLRLLAFKYHNRDVKGINYVHLPEGLDFLPNNLRSFEWSAYPLNYLPSNFSP 608

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG------CLKLEKLPE----EIGNLE 581
            + LV+L L   S L+ + +   NL SL R++L        C K    P     ++GN E
Sbjct: 609 WN-LVELHLPY-SNLEKLWNGTQNLPSLERIDLRWSAHLIECPKFSNAPNLYGIDLGNCE 666

Query: 582 SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           S+ +++           S+  L KL  L +  CK L+SL
Sbjct: 667 SISHVD----------PSIFNLPKLEWLDVSGCKSLESL 695


>gi|357514797|ref|XP_003627687.1| NBS resistance protein [Medicago truncatula]
 gi|355521709|gb|AET02163.1| NBS resistance protein [Medicago truncatula]
          Length = 795

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 257/722 (35%), Positives = 386/722 (53%), Gaps = 93/722 (12%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL 62
           +SSSS +     K+DVF+SFRG D R  F SHL+AALCR    T+ID ++ +G+E+   L
Sbjct: 6   ASSSSFDGSGLKKYDVFISFRGDDTRAGFTSHLHAALCRSNFHTYIDYRIEKGDEVWGEL 65

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIV---VPVFYLVDPSD---- 115
             AI  S + +V+FSE YA S WCLNELV+I+E  N         +PVFY VDPS     
Sbjct: 66  QKAINESTLFLVVFSENYAFSTWCLNELVQIMECSNNNENDNVVVIPVFYHVDPSHVRKQ 125

Query: 116 -AGYCPSLG----------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLF 153
              Y  +L           W   +F+             +ES LIE  +  +  KL+  +
Sbjct: 126 TGSYGTALAKHIDHKMLQNWKNALFEASNLSGFHSTTYRTESDLIEDIIRVVLGKLNHRY 185

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
             +     +  E+    I+S +   S+E   +G+WG+GG GKTT+A+A++  +SSH+EG 
Sbjct: 186 AIELTYSFILDENYWS-IKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGH 244

Query: 214 YFMQNIRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLT 254
            F++N+ ++SEK G                       +  +  RRRL RMK  IV  D+ 
Sbjct: 245 CFLENVTEQSEKHGINDTCNKLLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVH 304

Query: 255 DLKQIDLLIGRLDGFV-PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             + +  LIG   G++  GS VI+TTRD  +L +     +  ++EVK+++  +SL LF  
Sbjct: 305 TSELLQNLIGVGHGWLGAGSTVIVTTRDKHVLIS---GGIEEIYEVKKMNSQNSLQLFCL 361

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           NAF    P  GF+ELS   I YA G+PLAL+VLGS L+  SE EW  A++KL+++ + +I
Sbjct: 362 NAFDTVFPKEGFVELSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEI 421

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            ++L+ SY+ LDD+E+NIFLD ACFFKG ++  V   L+ C F A IGIS L+ K+L+ +
Sbjct: 422 DRILRWSYNELDDKEKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRV 481

Query: 434 S-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDS 490
              N I MHDL+QEMG +IVR+ES+K+PG+RSRL  P++++ VL  N  + +   I LD+
Sbjct: 482 DYKNFIQMHDLIQEMGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDA 541

Query: 491 LKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
            +  ++    N K F ++  N+  L   D K      LP  + +L   +   L +    K
Sbjct: 542 TEYTHIN--LNPKAFEKM-VNLRLLAFRDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWK 598

Query: 548 SVSSRLC----------------------NLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           S+    C                      ++ +L  L+L    KL + P   G+  +L+Y
Sbjct: 599 SLPPTFCAEMLVELSMQESHVEKLWNGVLDMPNLEVLDLGRSRKLIECPNVSGS-PNLKY 657

Query: 586 LNLAEKDFEKIP---SSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKT 639
           + L  +D E +P   SS+  L KL  L +  C  L+SL    C  +   ++A  C +LK 
Sbjct: 658 VTL--EDCESMPEVDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDNLKD 715

Query: 640 LS 641
           +S
Sbjct: 716 IS 717


>gi|225460157|ref|XP_002276248.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1253

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 258/710 (36%), Positives = 375/710 (52%), Gaps = 109/710 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R+NF +HL   L  + I+TFID+ +L  G  ISP+L +AIE SK+SI
Sbjct: 14  RYDVFLSFRGEDTRNNFTAHLLKELRTKGIDTFIDEERLETGQVISPALVAAIESSKLSI 73

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
           ++ SE YASSRWCL ELVKILE K   GQ V+P+FY VDPSD       +  +L      
Sbjct: 74  IVLSENYASSRWCLEELVKILECKRTRGQRVLPIFYDVDPSDVRNHRGKFGEALAKHDVN 133

Query: 124 ---------W-MGIFDIPT---------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W + + ++           +E+  IE   + I  +  ++  SD  + LVG+
Sbjct: 134 LRNMDRVPIWRVALTEVANLSGRDSRNKNEATFIEEIASFIFHEKINMAQSDTAEDLVGI 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S + EIE  L   + +   +GIWG+ GIGKTT+A AI+    + FEG  F +N+  E E
Sbjct: 194 DSRLCEIEPLLCLKAADVRIIGIWGMSGIGKTTLAGAIFERFRNQFEGCVFFENVGTELE 253

Query: 225 KVG-------------GLANIHLNFE---RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
           + G             GL N+ L      +  L   KVLIV  ++ D   I+ +  + D 
Sbjct: 254 REGIEGLQEKLLSKILGLKNLSLTGRPSIKAALGSKKVLIVLDNVKDQMIIEKIAKKRDW 313

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F  GSR+IITT +  +L+ H    V  ++EVK+   ++++ LFSR AF Q+HP   F+EL
Sbjct: 314 FGVGSRIIITTTNKNVLRTH---EVKEIYEVKKFDGDEAMKLFSRYAFKQDHPRKDFVEL 370

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           S  +I   +G+PLA+++LG  L   S+ EWES ++KL +   + I   L++SY+ L+D+E
Sbjct: 371 SKSIIACTHGLPLAIKLLGDLLFEKSKHEWESKLDKLNKDLKLGIN-CLQMSYNELNDDE 429

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           Q +FLD ACFFKG D   V   LD        GI  LV KSL+TIS NK+ MHDLLQEMG
Sbjct: 430 QCLFLDIACFFKGEDIDYVAKILDNHNRCPIDGIHALVDKSLITISGNKLQMHDLLQEMG 489

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINL------------------ 488
            E+V Q+S ++PGKR+RLW  EDI  VL  N+ T    GI+L                  
Sbjct: 490 REVVCQKS-QEPGKRTRLWKHEDISLVLKNNKGTEEVEGISLDLSHVKEKLRFETPAFAR 548

Query: 489 ---------------------------------DSLKELYLGGCSNLKRFPEI--SCNIE 513
                                            D L+ L+L G  NLK  P    + N+ 
Sbjct: 549 MNKLKLLKVYNSGGASKKGNCNVHFSQGFKFHYDELRYLHLHG-YNLKSLPNDFNAENLV 607

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            L +  + +++L      + +L  +DL++ + L + +     + +L +L L GC+ L KL
Sbjct: 608 HLSMPHSYVQQLWKGSKGMEKLKSIDLSHSTRL-TETPNFSGVVNLEQLILQGCISLRKL 666

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
              IG L  L+ LNL + K  + +  S+  LS L  L +  C +L+  PE
Sbjct: 667 HTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFPE 716



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 3/137 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK + L   + L   P  S   N+E L L+   ++ +L +SIG L++L  L+L +C 
Sbjct: 626 MEKLKSIDLSHSTRLTETPNFSGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCK 685

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS+S  +C L SL+ L +SGC KL+K PE +G LE L+ L   E    ++PSSM  L 
Sbjct: 686 MLKSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLK 745

Query: 605 KLSDLRLQNCKRLQSLP 621
            L     Q  K     P
Sbjct: 746 NLETFSFQGRKGPSPAP 762



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 77/182 (42%), Gaps = 30/182 (16%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L SL+ L + GC  LK+FPE    +E   +L   ETA+ E+PSS+G L  L         
Sbjct: 697 LSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRK 756

Query: 545 GLKSVSSRLCNLKS---------------------LRRLNLSGCLKLEKLPEEIGNLESL 583
           G     S +   +S                       R  L G    +        +  L
Sbjct: 757 GPSPAPSSMLRTRSDSMGFILPHVSGLSSLLKLNLSDRNILDGARLSDLGLLSSLKILIL 816

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
              N     F+ +P  + QL  L  L  +NC+RLQ+LPELP     I A +CTSL+ +SN
Sbjct: 817 NGNN-----FDTLPGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGAHNCTSLEAVSN 871

Query: 643 SS 644
            S
Sbjct: 872 QS 873


>gi|358344433|ref|XP_003636294.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355502229|gb|AES83432.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1198

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 257/722 (35%), Positives = 386/722 (53%), Gaps = 93/722 (12%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL 62
           +SSSS +     K+DVF+SFRG D R  F SHL+AALCR    T+ID ++ +G+E+   L
Sbjct: 6   ASSSSFDGSGLKKYDVFISFRGDDTRAGFTSHLHAALCRSNFHTYIDYRIEKGDEVWGEL 65

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIV---VPVFYLVDPSD---- 115
             AI  S + +V+FSE YA S WCLNELV+I+E  N         +PVFY VDPS     
Sbjct: 66  QKAINESTLFLVVFSENYAFSTWCLNELVQIMECSNNNENDNVVVIPVFYHVDPSHVRKQ 125

Query: 116 -AGYCPSLG----------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLF 153
              Y  +L           W   +F+             +ES LIE  +  +  KL+  +
Sbjct: 126 TGSYGTALAKHIDHKMLQNWKNALFEASNLSGFHSTTYRTESDLIEDIIRVVLGKLNHRY 185

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
             +     +  E+    I+S +   S+E   +G+WG+GG GKTT+A+A++  +SSH+EG 
Sbjct: 186 AIELTYSFILDENYWS-IKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGH 244

Query: 214 YFMQNIRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLT 254
            F++N+ ++SEK G                       +  +  RRRL RMK  IV  D+ 
Sbjct: 245 CFLENVTEQSEKHGINDTCNKLLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVH 304

Query: 255 DLKQIDLLIGRLDGFV-PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             + +  LIG   G++  GS VI+TTRD  +L +     +  ++EVK+++  +SL LF  
Sbjct: 305 TSELLQNLIGVGHGWLGAGSTVIVTTRDKHVLIS---GGIEEIYEVKKMNSQNSLQLFCL 361

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           NAF    P  GF+ELS   I YA G+PLAL+VLGS L+  SE EW  A++KL+++ + +I
Sbjct: 362 NAFDTVFPKEGFVELSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEI 421

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            ++L+ SY+ LDD+E+NIFLD ACFFKG ++  V   L+ C F A IGIS L+ K+L+ +
Sbjct: 422 DRILRWSYNELDDKEKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRV 481

Query: 434 S-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDS 490
              N I MHDL+QEMG +IVR+ES+K+PG+RSRL  P++++ VL  N  + +   I LD+
Sbjct: 482 DYKNFIQMHDLIQEMGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDA 541

Query: 491 LKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
            +  ++    N K F ++  N+  L   D K      LP  + +L   +   L +    K
Sbjct: 542 TEYTHIN--LNPKAFEKM-VNLRLLAFRDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWK 598

Query: 548 SVSSRLC----------------------NLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           S+    C                      ++ +L  L+L    KL + P   G+  +L+Y
Sbjct: 599 SLPPTFCAEMLVELSMQESHVEKLWNGVLDMPNLEVLDLGRSRKLIECPNVSGS-PNLKY 657

Query: 586 LNLAEKDFEKIP---SSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKT 639
           + L  +D E +P   SS+  L KL  L +  C  L+SL    C  +   ++A  C +LK 
Sbjct: 658 VTL--EDCESMPEVDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDNLKD 715

Query: 640 LS 641
           +S
Sbjct: 716 IS 717


>gi|224126763|ref|XP_002329467.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870147|gb|EEF07278.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 514

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 225/516 (43%), Positives = 305/516 (59%), Gaps = 57/516 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           HDVFL+FRG+D R+ F SHL+ ALC + +  +IDD+L RG  I+P+L  AIE S+ISIV+
Sbjct: 1   HDVFLNFRGQDTRNTFTSHLHQALCNKGVHAYIDDELERGKAIAPALLQAIEQSRISIVV 60

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD--------------AGYCPS 121
           FSE YA S +CL+ELVK+LE K   GQ+V+PVFY VDPSD              A  C +
Sbjct: 61  FSETYACSSYCLDELVKMLECKESKGQVVLPVFYNVDPSDVEVQNDSFGEPVLRAASCAA 120

Query: 122 ------LGWMGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                 L W                  +E+  I+  V  +   L+  F     D  VG++
Sbjct: 121 ASMDKLLVWKEALTKAARLSGWHLDNGNEAKTIQSIVEKVLAILNRAFLH-VADYPVGLD 179

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           S I+++  QL   S +   VGI GIGGIGKTT+A AIY+ I++ FEGS F+ N+R+ +++
Sbjct: 180 SHIQDLNCQLRLASNDVCMVGILGIGGIGKTTVAKAIYNEIANQFEGSSFLANVREMAKQ 239

Query: 226 ---------------------VGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                                VG + +  +   + RL   KVLIV  D+ ++ Q+  L G
Sbjct: 240 NKVVELQQTLLSQILGDKNCSVGNI-DFGIGVIKDRLCSKKVLIVVDDVDNVDQLKRLAG 298

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F  GSR+IIT+RD  +L +H    V  V +V+EL  +D+  LFS +AF  + P   
Sbjct: 299 EPDWFGAGSRIIITSRDEHVLVSHG---VKFVHKVEELCRDDAFQLFSLHAFRNSQPKEE 355

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F+  S   + YA G+PLAL VLGS+L G S  EWES ++KLK++P+  I ++LK+SYDGL
Sbjct: 356 FMMHSREAVTYAQGLPLALVVLGSFLYGRSVHEWESQLDKLKQIPNKKIYEILKISYDGL 415

Query: 385 DDEEQN-IFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDL 443
           +D  Q  IFLD ACFF+G D+  VM    AC F   IG+  L+ KSL++I NNK+ MHDL
Sbjct: 416 EDGTQKAIFLDIACFFRGMDKDYVMKVFHACNFKPIIGVQVLIEKSLISIENNKLQMHDL 475

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
           LQ MG +IV+QES   PG+RSRLW  EDI  VL EN
Sbjct: 476 LQAMGRQIVQQESPNIPGRRSRLWFHEDIVHVLTEN 511


>gi|357490889|ref|XP_003615732.1| Resistance protein [Medicago truncatula]
 gi|355517067|gb|AES98690.1| Resistance protein [Medicago truncatula]
          Length = 1177

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 250/720 (34%), Positives = 385/720 (53%), Gaps = 119/720 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG D R++ VSHL AAL   +I TF+DD KL++G+E+ P L  AI+GS+I +V
Sbjct: 7   YDVFINFRGDDSRNSLVSHLYAALSNARINTFLDDEKLHKGSELQPQLLRAIQGSQICLV 66

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FSE Y+ S WCL EL KI+E++  +GQIV+P+FY +DP+        +  +L       
Sbjct: 67  VFSENYSRSSWCLLELEKIMENRGTHGQIVIPIFYHIDPAIVRRQLGNFGKALEITAKKM 126

Query: 123 ------------GW---------MGIFDIPTS--ESVLIEGNVNDISKKLSDLFPSDNKD 159
                        W         +  +D+ +S  ES L++  V ++  KL + F     +
Sbjct: 127 QSKREKQKLLLQTWKSALSQATNLSGWDVTSSRNESELVQKIVEEVLAKLDNTF-MPLPE 185

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
             VG+ES ++++   + + ST+   +GIWG+GG+GKTT A AIY+ I   F    F++NI
Sbjct: 186 HTVGLESRVEKMVPWIENNSTKVCMIGIWGMGGLGKTTAAKAIYNQIHRKFVYRSFIENI 245

Query: 220 RDE------------------------SEKVGGLANIHLNFERRRLSRMKVLIVFYDLTD 255
           R+                          EK+  +A+  +   ++ LS  KVLIV  D+T 
Sbjct: 246 RETCERDSKGGWHICLQQQLLSDLLKTKEKIHNIASGTIAI-KKMLSAKKVLIVLDDVTK 304

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           ++Q+  L      F  GS +I+T+RD  +LK+    +V HV+ V E+   +SL LFS +A
Sbjct: 305 VEQVKALYESRKWFGAGSVLIVTSRDAHILKS---LQVDHVYPVNEMDQKESLELFSWHA 361

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F Q  P A F ELS+ VIKY  G+PLA +V+GSYL G + EEW S ++KL+ +P   +Q+
Sbjct: 362 FRQASPRADFSELSSSVIKYCGGLPLAAEVIGSYLYGRTREEWTSVLSKLEIIPDHHVQE 421

Query: 376 VLKVSYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI- 433
            L++SYDGL D +Q +IFLD  CFF G D+  V   L+ C   A IGIS L+ +SL+ + 
Sbjct: 422 KLRISYDGLSDGKQKDIFLDICCFFIGKDRAYVTEILNGCGLFASIGISVLIERSLLKVE 481

Query: 434 SNNKITMHDLLQEMGGEIVRQE--------SIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
            NNK+ MHDL+++MG EIVRQ         S KDPG+RSRLW  +D++ VL  NT   T 
Sbjct: 482 KNNKLGMHDLIRDMGREIVRQNSEKDVRQISEKDPGERSRLWFQKDVHDVLTNNTGTKTV 541

Query: 485 ---GINLDS-------------LKELYL--GGCSNLK-RFPEISCNIEDLDLKETAIEEL 525
               +NL++             +K+L L    C +L   F  +S  +  ++ +++    +
Sbjct: 542 EGLVLNLETTSRASFNTSAFQEMKKLRLLQLDCVDLTGDFGFLSKQLRWVNWRQSTFNHV 601

Query: 526 PSSI--GN--------------------LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
           P++   GN                    L +L  L+L++   LK+ +     L SL +L 
Sbjct: 602 PNNFYQGNLVVFELKYSMVKQVWKETPFLDKLKILNLSHSKYLKN-TPNFSLLPSLEKLI 660

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +  C  L ++   IG+L +L  +N  +      +P  + QL  ++ L L  C  +  L E
Sbjct: 661 MKDCPSLSEVHPSIGDLNNLLLINFKDCTSLGNLPREISQLMSVTTLILDGCSNITELEE 720



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           LD LK L L     LK  P  S   ++E L +K+  ++ E+  SIG+L+ L+ ++  +C+
Sbjct: 630 LDKLKILNLSHSKYLKNTPNFSLLPSLEKLIMKDCPSLSEVHPSIGDLNNLLLINFKDCT 689

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++   +  L S+  L L GC  + +L E++  ++SL+ L  A    EK P S+
Sbjct: 690 SLGNLPREISQLMSVTTLILDGCSNITELEEDVVQMKSLKTLMAARTGIEKAPFSI 745


>gi|297741031|emb|CBI31343.3| unnamed protein product [Vitis vinifera]
          Length = 1239

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 258/710 (36%), Positives = 374/710 (52%), Gaps = 109/710 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R+NF +HL   L  + I+TFID+ +L  G  ISP+L +AIE SK+SI
Sbjct: 14  RYDVFLSFRGEDTRNNFTAHLLKELRTKGIDTFIDEERLETGQVISPALVAAIESSKLSI 73

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
           ++ SE YASSRWCL ELVKILE K   GQ V+P+FY VDPSD       +  +L      
Sbjct: 74  IVLSENYASSRWCLEELVKILECKRTRGQRVLPIFYDVDPSDVRNHRGKFGEALAKHDVN 133

Query: 124 ---------W-MGIFDIPT---------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W + + ++           +E+  IE   + I  +  ++  SD  + LVG+
Sbjct: 134 LRNMDRVPIWRVALTEVANLSGRDSRNKNEATFIEEIASFIFHEKINMAQSDTAEDLVGI 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S + EIE  L   + +   +GIWG+ GIGKTT+A AI+    + FEG  F +N+  E E
Sbjct: 194 DSRLCEIEPLLCLKAADVRIIGIWGMSGIGKTTLAGAIFERFRNQFEGCVFFENVGTELE 253

Query: 225 KVG-------------GLANIHLNFE---RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
           + G             GL N+ L      +  L   KVLIV  ++ D   I+ +  + D 
Sbjct: 254 REGIEGLQEKLLSKILGLKNLSLTGRPSIKAALGSKKVLIVLDNVKDQMIIEKIAKKRDW 313

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F  GSR+IITT +  +L+ H    V  ++EVK+   ++++ LFSR AF Q+HP   F+EL
Sbjct: 314 FGVGSRIIITTTNKNVLRTH---EVKEIYEVKKFDGDEAMKLFSRYAFKQDHPRKDFVEL 370

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           S  +I   +G+PLA+++LG  L   S+ EWES ++KL +   + I   L++SY+ L+D+E
Sbjct: 371 SKSIIACTHGLPLAIKLLGDLLFEKSKHEWESKLDKLNKDLKLGIN-CLQMSYNELNDDE 429

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           Q +FLD ACFFKG D   V   LD        GI  LV KSL+TIS NK+ MHDLLQEMG
Sbjct: 430 QCLFLDIACFFKGEDIDYVAKILDNHNRCPIDGIHALVDKSLITISGNKLQMHDLLQEMG 489

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINL------------------ 488
            E+V Q+S ++PGKR+RLW  EDI  VL  N+ T    GI+L                  
Sbjct: 490 REVVCQKS-QEPGKRTRLWKHEDISLVLKNNKGTEEVEGISLDLSHVKEKLRFETPAFAR 548

Query: 489 ---------------------------------DSLKELYLGGCSNLKRFPEI--SCNIE 513
                                            D L+ L+L G  NLK  P    + N+ 
Sbjct: 549 MNKLKLLKVYNSGGASKKGNCNVHFSQGFKFHYDELRYLHLHG-YNLKSLPNDFNAENLV 607

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            L +  + +++L      + +L  +DL++ + L   +     + +L +L L GC+ L KL
Sbjct: 608 HLSMPHSYVQQLWKGSKGMEKLKSIDLSHSTRLTE-TPNFSGVVNLEQLILQGCISLRKL 666

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
              IG L  L+ LNL + K  + +  S+  LS L  L +  C +L+  PE
Sbjct: 667 HTSIGVLNKLKLLNLRDCKMLKSLSESICCLSSLQTLVVSGCCKLKKFPE 716



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 3/137 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK + L   + L   P  S   N+E L L+   ++ +L +SIG L++L  L+L +C 
Sbjct: 626 MEKLKSIDLSHSTRLTETPNFSGVVNLEQLILQGCISLRKLHTSIGVLNKLKLLNLRDCK 685

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS+S  +C L SL+ L +SGC KL+K PE +G LE L+ L   E    ++PSSM  L 
Sbjct: 686 MLKSLSESICCLSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLK 745

Query: 605 KLSDLRLQNCKRLQSLP 621
            L     Q  K     P
Sbjct: 746 NLETFSFQGRKGPSPAP 762



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 28/181 (15%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L SL+ L + GC  LK+FPE    +E   +L   ETA+ E+PSS+G L  L         
Sbjct: 697 LSSLQTLVVSGCCKLKKFPENLGKLEMLKELYADETAVTEVPSSMGFLKNLETFSFQGRK 756

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-------------- 590
           G     S +   +S    +  G +             +L   N+ +              
Sbjct: 757 GPSPAPSSMLRTRS----DSMGFILPHVSGLSSLLKLNLSDRNILDGARLSDLGLLSSLK 812

Query: 591 ------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
                  +F+ +P  + QL  L  L  +NC+RLQ+LPELP     I A +CTSL+ +SN 
Sbjct: 813 ILILNGNNFDTLPGCISQLFLLGWLESKNCQRLQALPELPSSIGYIGAHNCTSLEAVSNQ 872

Query: 644 S 644
           S
Sbjct: 873 S 873


>gi|358345567|ref|XP_003636848.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355502783|gb|AES83986.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1237

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 257/722 (35%), Positives = 386/722 (53%), Gaps = 93/722 (12%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL 62
           +SSSS +     K+DVF+SFRG D R  F SHL+AALCR    T+ID ++ +G+E+   L
Sbjct: 6   ASSSSFDGSGLKKYDVFISFRGDDTRAGFTSHLHAALCRSNFHTYIDYRIEKGDEVWGEL 65

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIV---VPVFYLVDPSD---- 115
             AI  S + +V+FSE YA S WCLNELV+I+E  N         +PVFY VDPS     
Sbjct: 66  QKAINESTLFLVVFSENYAFSTWCLNELVQIMECSNNNENDNVVVIPVFYHVDPSHVRKQ 125

Query: 116 -AGYCPSLG----------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLF 153
              Y  +L           W   +F+             +ES LIE  +  +  KL+  +
Sbjct: 126 TGSYGTALAKHIDHKMLQNWKNALFEASNLSGFHSTTYRTESDLIEDIIRVVLGKLNHRY 185

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
             +     +  E+    I+S +   S+E   +G+WG+GG GKTT+A+A++  +SSH+EG 
Sbjct: 186 AIELTYSFILDENYWS-IKSLIKIDSSEVQIIGVWGMGGTGKTTLAAAMFQRVSSHYEGH 244

Query: 214 YFMQNIRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLT 254
            F++N+ ++SEK G                       +  +  RRRL RMK  IV  D+ 
Sbjct: 245 CFLENVTEQSEKHGINDTCNKLLSKLLGEDLDITTLKVIPSMIRRRLKRMKSFIVLDDVH 304

Query: 255 DLKQIDLLIGRLDGFV-PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             + +  LIG   G++  GS VI+TTRD  +L +     +  ++EVK+++  +SL LF  
Sbjct: 305 TSELLQNLIGVGHGWLGAGSTVIVTTRDKHVLIS---GGIEEIYEVKKMNSQNSLQLFCL 361

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           NAF    P  GF+ELS   I YA G+PLAL+VLGS L+  SE EW  A++KL+++ + +I
Sbjct: 362 NAFDTVFPKEGFVELSKRAIDYAKGIPLALKVLGSSLRCKSEIEWNCALSKLEKISNAEI 421

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            ++L+ SY+ LDD+E+NIFLD ACFFKG ++  V   L+ C F A IGIS L+ K+L+ +
Sbjct: 422 DRILRWSYNELDDKEKNIFLDIACFFKGRERNSVTKILNDCGFFADIGISHLLDKALIRV 481

Query: 434 S-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDS 490
              N I MHDL+QEMG +IVR+ES+K+PG+RSRL  P++++ VL  N  + +   I LD+
Sbjct: 482 DYKNFIQMHDLIQEMGRQIVREESLKNPGQRSRLCDPKEVFDVLKNNRGSEIIEAIFLDA 541

Query: 491 LKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
            +  ++    N K F ++  N+  L   D K      LP  + +L   +   L +    K
Sbjct: 542 TEYTHIN--LNPKAFEKM-VNLRLLAFRDHKGVKSVSLPHGLDSLPETLRYFLWDGYPWK 598

Query: 548 SVSSRLC----------------------NLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           S+    C                      ++ +L  L+L    KL + P   G+  +L+Y
Sbjct: 599 SLPPTFCAEMLVELSMQESHVEKLWNGVLDMPNLEVLDLGRSRKLIECPNVSGS-PNLKY 657

Query: 586 LNLAEKDFEKIP---SSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKT 639
           + L  +D E +P   SS+  L KL  L +  C  L+SL    C  +   ++A  C +LK 
Sbjct: 658 VTL--EDCESMPEVDSSIFLLQKLERLSVLGCTSLKSLSSNTCSPAFRELNAMFCDNLKD 715

Query: 640 LS 641
           +S
Sbjct: 716 IS 717


>gi|147767848|emb|CAN75658.1| hypothetical protein VITISV_003715 [Vitis vinifera]
          Length = 2019

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 261/689 (37%), Positives = 371/689 (53%), Gaps = 94/689 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R +F  HL +AL    + TF D ++L RG  I+P L  AIE S+ISIV
Sbjct: 15  YDVFLSFRGEDTRCHFTDHLYSALIGNGVHTFRDHEELERGGAIAPGLLKAIEQSRISIV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGWMGI-- 127
           +FSE YA SRWCL+ELVKI+E + +  Q+V+PVFY VDPS        Y  +  +     
Sbjct: 75  VFSENYAQSRWCLDELVKIIECRTEREQLVLPVFYHVDPSHVRKQMGSYGEAFAYHEKDA 134

Query: 128 -----FDIPTSESVLIEGNVNDISKKLS--DLFPSDNKDQLVGVESIIKEIESQLLSGST 180
                  I  SESV+IE   N+I  +L+   L+  +N   +VG+   +++++S +     
Sbjct: 135 DLKRREKIQKSESVVIEEITNNIITRLNPKSLYVGEN---IVGMNIRLEKLKSLINIYLN 191

Query: 181 EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG------------ 228
           +   VGI GIGGIGKTTI  A+Y+ IS+ F+G  F+ N+R++SE   G            
Sbjct: 192 KVRMVGICGIGGIGKTTITKALYNQISNQFQGVSFLANVREKSEYDFGLLQLQQQLLNDI 251

Query: 229 -------LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITT 279
                  ++N+H  +N  +  LS  +VL+V  D+ +L+Q+  L+G+ D F  GSR++ITT
Sbjct: 252 LKRKNREISNVHEGMNVIKNELSLRRVLVVLDDVDNLRQLVHLVGKHDWFGQGSRILITT 311

Query: 280 RDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGV 339
           RD  LL  H   +  H  E++EL+  ++L LFS   F QN P   + +LS+ ++KYA G+
Sbjct: 312 RDRHLLDAHGVDKPYH--EIEELNSKEALQLFSLYTFKQNFPQEDYKDLSDHIVKYATGL 369

Query: 340 PLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF 399
           PLALQ+LGS+L      EWES + KL+R P  +IQ VLK+S+ GLD  ++ IFLD ACFF
Sbjct: 370 PLALQLLGSHLC-----EWESELCKLEREPVPEIQNVLKISFHGLDPTQREIFLDIACFF 424

Query: 400 KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKD 459
           KG D+  V   LD C F A+ G   L  + L+TI +NKI MHDL+Q+MG +IVR++  K 
Sbjct: 425 KGKDKDFVSRILDGCDFYAESGFRVLRDRCLMTILDNKIHMHDLIQQMGWQIVREQYHKK 484

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPT--GINLD---------------------------- 489
           PGK SRLW P D+  VL  NT      GI LD                            
Sbjct: 485 PGKWSRLWEPNDVSHVLTRNTGTEAIEGIFLDMSTSKQMQFTTEAFKMMNKLRLLKVHQD 544

Query: 490 -------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLV 536
                           ++ L      + F   S  +  L      +E LPS+      LV
Sbjct: 545 AKYDSIVYSWMPVEPSKVLLSQVHFCRDFEFPSQELRCLHWDGYPLESLPSNF-CAKNLV 603

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK--DFE 594
           +L+L  CS +K +       K+L+ +NLS    L K+P  +G + +LE L L     + E
Sbjct: 604 ELNL-RCSNIKQLWKTETLHKNLKVINLSYSEHLNKIPNPLG-VPNLEILTLEGWCVNLE 661

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            +P S+ +L  L  L    C  L S PE+
Sbjct: 662 SLPRSIYKLRCLKTLCCSGCVSLSSFPEI 690



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/134 (44%), Positives = 77/134 (57%), Gaps = 9/134 (6%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP  I  L  LK L   GC +L  FPEI  N+E+L    L +TAI +LPSSI +L  L 
Sbjct: 662 SLPRSIYKLRCLKTLCCSGCVSLSSFPEIMGNMENLRELYLDDTAIVKLPSSIKHLKGLE 721

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L L  C  LK+V   +CNL SL+ L+ S C KLEKLPE++ +L+ LE L+L       +
Sbjct: 722 YLTLVKCDDLKTVPQSICNLTSLKLLDFSSCSKLEKLPEDLKSLKCLETLSL-----HAV 776

Query: 597 PSSMKQLSKLSDLR 610
              +  LS L  LR
Sbjct: 777 NCQLPSLSGLCSLR 790



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 55/209 (26%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE----TAIEELPSSIGNLSRLV 536
           LP+ I +L  L+ L L  C +LK  P+  CN+  L L +    + +E+LP  + +L  L 
Sbjct: 710 LPSSIKHLKGLEYLTLVKCDDLKTVPQSICNLTSLKLLDFSSCSKLEKLPEDLKSLKCLE 769

Query: 537 DLDL--TNC-----SGL---------------------------------------KSVS 550
            L L   NC     SGL                                       K + 
Sbjct: 770 TLSLHAVNCQLPSLSGLCSLRKLYLGRSNLTQGVIQSNNLLNSLKVLDLSRNNVIDKGIL 829

Query: 551 SRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
            R+C+L SL  LNL  C  ++ ++P E+  L SLE L+L+   F  IP+S+ QLSKL  L
Sbjct: 830 IRICHLSSLEELNLKNCNLMDGEIPSEVCQLSSLEILDLSWNHFNSIPASISQLSKLKAL 889

Query: 610 RLQNCKRLQSLPELPCGSSI---HARHCT 635
            L +CK LQ +PELP    +   H  HC 
Sbjct: 890 GLSHCKMLQQIPELPSTLRLLDAHNSHCA 918



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 12/168 (7%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP+     +L EL L  CSN+K+  +     ++L +   +  E  + I N   + +L++
Sbjct: 592 SLPSNFCAKNLVELNLR-CSNIKQLWKTETLHKNLKVINLSYSEHLNKIPNPLGVPNLEI 650

Query: 541 TN----CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
                 C  L+S+   +  L+ L+ L  SGC+ L   PE +GN+E+L  L L +    K+
Sbjct: 651 LTLEGWCVNLESLPRSIYKLRCLKTLCCSGCVSLSSFPEIMGNMENLRELYLDDTAIVKL 710

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSS 644
           PSS+K L  L  L L  C  L+++P+  C       + TSLK L  SS
Sbjct: 711 PSSIKHLKGLEYLTLVKCDDLKTVPQSIC-------NLTSLKLLDFSS 751



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 11/145 (7%)

Query: 511 NIEDLDLKETAI--EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
           N+E L L+   +  E LP SI  L  L  L  + C  L S    + N+++LR L L    
Sbjct: 647 NLEILTLEGWCVNLESLPRSIYKLRCLKTLCCSGCVSLSSFPEIMGNMENLRELYLDD-T 705

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE----L 623
            + KLP  I +L+ LEYL L +  D + +P S+  L+ L  L   +C +L+ LPE    L
Sbjct: 706 AIVKLPSSIKHLKGLEYLTLVKCDDLKTVPQSICNLTSLKLLDFSSCSKLEKLPEDLKSL 765

Query: 624 PCGS--SIHARHCTSLKTLSNSSTL 646
            C    S+HA +C  L +LS   +L
Sbjct: 766 KCLETLSLHAVNC-QLPSLSGLCSL 789


>gi|82542047|gb|ABB82031.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 1146

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 247/720 (34%), Positives = 366/720 (50%), Gaps = 129/720 (17%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I TF DD +L RG EIS  L  AI+ SK
Sbjct: 48  PEGAYDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAIQESK 107

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
           +SIV+FS+GYASSRWCL ELV+IL+ KN K GQI +P+FY +DPSD       +  +   
Sbjct: 108 MSIVVFSKGYASSRWCLKELVEILKCKNGKTGQIALPIFYDIDPSDVRKQTGSFAEAFVK 167

Query: 123 -------------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSD 156
                                    GW  + D+    E+  I+  + D+  KL   +   
Sbjct: 168 HEERFEEKYLVKEWRKALEEAGNLSGW-NLNDMANGHEAKFIKEIIKDVLNKLDPKYLY- 225

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
             + LVG++ +   I   L + + +   VG+ G+ GIGKTTIA  +++ +   FEGS F+
Sbjct: 226 VPEHLVGMDRLAHNIFDFLSTATDDVRIVGVHGMPGIGKTTIAQVVFNQLCHGFEGSCFL 285

Query: 217 QNIRDESEKVGGLANIH------------LNFE---------RRRLSRMKVLIVFYDLTD 255
            +I + S++V GL                 NF+         + RL R +VL+V  D+  
Sbjct: 286 SDINERSKQVNGLVPFQKQLLHDILKQDVANFDCVDRGKVLIKERLRRKRVLVVADDMAH 345

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
             Q++ L+G    F P SR+IITTR   LL+          +++KEL  +++L LFS +A
Sbjct: 346 PDQLNALMGDRSWFGPRSRLIITTRYSSLLRE-----ADQTYQIKELEPDEALQLFSWHA 400

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F    PA  ++ELS   + Y  G+PLAL+V+G+ L G  +  WES ++ L R+P  +IQ 
Sbjct: 401 FKDTKPAEDYIELSKKAVDYCGGLPLALEVIGALLYGKEKHRWESEIDNLSRIPESNIQG 460

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTIS 434
            L +S+D LD E +N FLD ACFF   ++  V   L A CR++ ++ +  L  +SLV + 
Sbjct: 461 KLLISFDALDGELRNAFLDIACFFIDVEKEYVAKLLGARCRYNPEVVLETLRERSLVKVF 520

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD--- 489
            + +TMHDLL++MG E+V + S K+PGKR+R+W+ +D + VL +   T +  G+ LD   
Sbjct: 521 GDMVTMHDLLRDMGREVVCKASPKEPGKRTRIWNQKDAWNVLEQQKGTDVVEGLALDVRA 580

Query: 490 -SLKELYLGGCSNLKR----------------------------------FPEISC--NI 512
              K L  G  + +KR                                  FP      N+
Sbjct: 581 SEAKSLSTGSFAKMKRLNLLQINGAHLTGSFKLLSKELMWICWLQCPSKYFPSDFTLDNL 640

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTN----------------------CSGLKSVS 550
             LD++ + ++EL      L+RL  ++L++                      CS L  V 
Sbjct: 641 VVLDMQYSNLKELWKGKKILNRLKIINLSHSQHLIKTPNLHSSSLEKLILKGCSSLVDVH 700

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
             + NL SL  LNL GC  L+ LP+ IGN++SLE LN++     EK+P  M  +  L+ L
Sbjct: 701 QSIGNLTSLVFLNLEGCWSLKILPKSIGNVKSLETLNISGCSQLEKLPEHMGDMESLTKL 760



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 2/127 (1%)

Query: 488 LDSLKELYLGGCSNLKRFPEI-SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           L+ LK + L    +L + P + S ++E L LK  +++ ++  SIGNL+ LV L+L  C  
Sbjct: 660 LNRLKIINLSHSQHLIKTPNLHSSSLEKLILKGCSSLVDVHQSIGNLTSLVFLNLEGCWS 719

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           LK +   + N+KSL  LN+SGC +LEKLPE +G++ESL  L     + E+  SS+ QL  
Sbjct: 720 LKILPKSIGNVKSLETLNISGCSQLEKLPEHMGDMESLTKLLADGIENEQFLSSIGQLKY 779

Query: 606 LSDLRLQ 612
           +  L L+
Sbjct: 780 VRRLSLR 786



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 21/178 (11%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIE--ELPSSIGNLSRLVD 537
           LP  I N+ SL+ L + GCS L++ PE   ++E L  L    IE  +  SSIG L  +  
Sbjct: 723 LPKSIGNVKSLETLNISGCSQLEKLPEHMGDMESLTKLLADGIENEQFLSSIGQLKYVRR 782

Query: 538 LDLTNCSGLKS---VSSRLCNLK----------SLRRLNLSGCLKLEKLPE--EIGNLES 582
           L L   +   S   +S+ + N K          S++ L LS     ++     +   L +
Sbjct: 783 LSLRGYNSAPSSSLISAGVLNWKRWLPTSFEWRSVKSLKLSNGSLSDRATNCVDFRGLFA 842

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
           LE L+L+   F  +PS +  L KL  L ++ CK L S+P+LP  SS+     +S K+L
Sbjct: 843 LEELDLSGNKFSSLPSGIGFLPKLGFLSVRACKYLVSIPDLP--SSLRCLGASSCKSL 898


>gi|449452168|ref|XP_004143832.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1217

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 254/753 (33%), Positives = 374/753 (49%), Gaps = 113/753 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R+NF SHL+ AL  + +  FIDDKL RG +IS SL  +I+GSKISI+I
Sbjct: 23  YDVFLSFRGEDTRNNFTSHLDRALREKGVNFFIDDKLERGGQISESLLKSIDGSKISIII 82

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------- 123
           FS+ YASS WCL+ELVKI++     G IV PVFY VDPS+      G+  +L        
Sbjct: 83  FSKNYASSTWCLDELVKIVQCMKSMGHIVFPVFYKVDPSEVRKQTGGFGEALAKHEANEL 142

Query: 124 -------W---------MGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W         +  +D+ T  +E+ LI   V ++   L+           VG++
Sbjct: 143 MTNKVQPWKEALTTAASLSGWDLATRKNEADLIHDLVKEVLSILNQTQLLHVAKHPVGID 202

Query: 166 SIIKEIESQLLSGSTE--FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           S ++ +E +L S       N VGI G+GGIGKTT+A A+Y+ I+  FE   F+ N+R+  
Sbjct: 203 SQLRAVE-ELASHDVPDGVNMVGIHGMGGIGKTTLAKALYNKIAYQFEACCFLSNVRETL 261

Query: 224 EKVGGL-------------------ANIHL--NFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           E+   L                    N+H   N  R RL   KVLI+  D+   +Q+D L
Sbjct: 262 EQFKDLVQLQEKLLSEILKDNAWKVGNVHKGKNIIRDRLCSKKVLIILDDVDKDEQLDAL 321

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           +G  D F  GS++I TTRD  LL+NH       V+ ++ L    SL LFS +AF QNHP+
Sbjct: 322 VGERDWFGRGSKIIATTRDRHLLENHS---FDIVYPIQLLDPKKSLELFSLHAFKQNHPS 378

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
           + +++LS   + Y  G+PLAL +LGS L     + W+S +++L+      ++ V ++ + 
Sbjct: 379 SNYVDLSKFAVSYCKGLPLALVILGSLLHKRERKIWKSKLHELENSLEPSVEAVFQIGFK 438

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
            L +  + IFLD +CFF G D     + L AC  +   GI  L+  SLVT+ + KI MHD
Sbjct: 439 ELHERVKEIFLDISCFFVGEDINYSKDVLKACDLNPDYGIIILMDLSLVTVEDGKIQMHD 498

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD----------- 489
           L+Q+MG  IVR ES  +P KRSRLW  E   ++L E   T     I LD           
Sbjct: 499 LIQQMGQTIVRHESF-EPAKRSRLWEAEGAIKILKEKSGTKAVKAIKLDLHYKPWLKIVE 557

Query: 490 -----SLKELYLGGCSNLKRFPE-----------------------------ISCNIEDL 515
                ++K L L     +  FP+                             +   +  L
Sbjct: 558 AEAFRNMKNLRLLILQRVAYFPKNIFEYLPNSLKWIEWSTFYVNQSSSISFSVKGRLVGL 617

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            +K    ++   +  N   +  +DL+ C  LK   +    L +L +L L GC  L+ + E
Sbjct: 618 VMKGVVNKQPRIAFENCKTMKHVDLSYCGTLKETPNFSATL-NLEKLYLRGCTSLKVIHE 676

Query: 576 EIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHA 631
            + +L  L  L+L   D  EK PSS   L  L  L L  C++++ +P+L   S+   ++ 
Sbjct: 677 SVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASSNLKELYL 736

Query: 632 RHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           R C  L+ + +S   + RS     I +   C N
Sbjct: 737 RECDRLRIIHDS---IGRSLDKLIILDLEGCKN 766



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 37/179 (20%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDL 538
            LP+ + L SL  L    C  L++ PE   N++ L   +L  TAI  LPSSIG L  L +L
Sbjct: 841  LPSSLKLKSLDSLSFTNCYKLEQLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENL 900

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP------------------------ 574
            +L +C+ L ++ + +  LKSL  L+L GC KL+  P                        
Sbjct: 901  NLNDCANLTALPNEIHWLKSLEELHLRGCSKLDMFPPRSSLNFSQESSYFKLTVLDLKNC 960

Query: 575  --------EEIGNL-ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                    E + N+  SLE LNL+   F  +P S++    L  L L+NCK LQ++ +LP
Sbjct: 961  NISNSDFLETLSNVCTSLEKLNLSGNTFSCLP-SLQNFKSLRFLELRNCKFLQNIIKLP 1018



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 6/140 (4%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           N  ++K + L  C  LK  P  S   N+E L L+  T+++ +  S+ +LS+LV LDL  C
Sbjct: 633 NCKTMKHVDLSYCGTLKETPNFSATLNLEKLYLRGCTSLKVIHESVASLSKLVTLDLEGC 692

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI--PSSMK 601
             L+   S    LKSL  LNLS C K+E++P ++    +L+ L L E D  +I   S  +
Sbjct: 693 DNLEKFPSSYLMLKSLEVLNLSRCRKIEEIP-DLSASSNLKELYLRECDRLRIIHDSIGR 751

Query: 602 QLSKLSDLRLQNCKRLQSLP 621
            L KL  L L+ CK L+ LP
Sbjct: 752 SLDKLIILDLEGCKNLERLP 771



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 157/409 (38%), Gaps = 81/409 (19%)

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQ--VLGSYLKGMSEEEWESAVNKLKRM 368
           F +N F     +  ++E S   +  ++ +  +++  ++G  +KG+  ++   A    K M
Sbjct: 578 FPKNIFEYLPNSLKWIEWSTFYVNQSSSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTM 637

Query: 369 PHMDIQKVLKVSYDGLDDEEQN---------IFLDTACFFK------GNDQYLVMNFLDA 413
            H+D+      SY G   E  N         ++L      K       +   LV   L+ 
Sbjct: 638 KHVDL------SYCGTLKETPNFSATLNLEKLYLRGCTSLKVIHESVASLSKLVTLDLEG 691

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           C    K   S L+ KSL  ++ ++    + + ++      +E       R R+ H     
Sbjct: 692 CDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASSNLKELYLRECDRLRIIHDS--- 748

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
                      G +LD L  L L GC NL+R P        L  K   +  L + + NL 
Sbjct: 749 ----------IGRSLDKLIILDLEGCKNLERLP-----TSHLKFKSLKVLNLRNCL-NLE 792

Query: 534 RLVD---------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG------ 578
            ++D         LDL  C  L+ +   + +L  L  L L  C  LEKLP  +       
Sbjct: 793 EIIDFSMASNLEILDLNTCFSLRIIHESIGSLDKLITLQLDLCHNLEKLPSSLKLKSLDS 852

Query: 579 -----------------NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                            N++SL  +NL       +PSS+  L  L +L L +C  L +LP
Sbjct: 853 LSFTNCYKLEQLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENLNLNDCANLTALP 912

Query: 622 E----LPCGSSIHARHCTSLKTLSNSSTL-LTRSSKHWD--IFNFSNCS 663
                L     +H R C+ L      S+L  ++ S ++   + +  NC+
Sbjct: 913 NEIHWLKSLEELHLRGCSKLDMFPPRSSLNFSQESSYFKLTVLDLKNCN 961


>gi|449486541|ref|XP_004157327.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1248

 Score =  357 bits (917), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 256/753 (33%), Positives = 377/753 (50%), Gaps = 113/753 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R+NF SHL+ AL  + +  FIDDKL RG +IS SL  +I+GSKISI+I
Sbjct: 23  YDVFLSFRGEDTRNNFTSHLDRALREKGVNFFIDDKLERGGQISESLLKSIDGSKISIII 82

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSLG------- 123
           FS+ YASS WCL+ELVKI++     G IV PVFY VDPS+      G+  +L        
Sbjct: 83  FSKNYASSTWCLDELVKIVQCMKSMGHIVFPVFYKVDPSEVRKQTGGFGEALAKHEANEL 142

Query: 124 -------W---------MGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W         +  +D+ T  +E+ LI   V ++   L+           VG++
Sbjct: 143 MTNKVQPWKEALTTAASLSGWDLATRKNEADLIHDLVKEVLSILNQTQLLHVAKHPVGID 202

Query: 166 SIIKEIESQLLSGSTE--FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           S ++ +E +L S       N VGI G+GGIGKTT+A A+Y+ I+  FE   F+ N+R+  
Sbjct: 203 SQLRAVE-ELASHDVPDGVNMVGIHGMGGIGKTTLAKALYNKIAYQFEACCFLSNVRETL 261

Query: 224 EKVGGLA-------------------NIHL--NFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           E+   L                    N+H   N  R RL   KVLI+  D+   +Q+D L
Sbjct: 262 EQFKDLVQLQEKLLSEILKDNAWKVGNVHKGKNIIRDRLCSKKVLIILDDVDKDEQLDAL 321

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           +G  D F  GS++I TTRD  LL+NH       V+ ++ L    SL LFS +AF QNHP+
Sbjct: 322 VGERDWFGRGSKIIATTRDRHLLENHS---FDIVYPIQLLDPKKSLELFSLHAFKQNHPS 378

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
           + +++LS   + Y  G+PLAL +LGS L     + W+S +++L+      ++ V ++ + 
Sbjct: 379 SNYVDLSKFAVSYCKGLPLALVILGSLLHKRERKIWKSKLHELENSLEPSVEAVFQIGFK 438

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
            L +  + IFLD +CFF G D     + L AC  +   GI  L+  SLVT+ + KI MHD
Sbjct: 439 ELHERVKEIFLDISCFFVGEDINYSKDVLKACDLNPDYGIIILMDLSLVTVEDGKIQMHD 498

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD----------- 489
           L+Q+MG  IVR ES  +P KRSRLW  E   ++L E   T     I LD           
Sbjct: 499 LIQQMGQTIVRHESF-EPAKRSRLWEAEGAIKILKEKSGTKAVKAIKLDLHYKPWLKIVE 557

Query: 490 -----SLKELYLGGCSNLKRFPE-------------------------ISCNIE----DL 515
                ++K L L     +  FP+                         IS +++     L
Sbjct: 558 AEAFRNMKNLRLLILQRVAYFPKNIFEYLPNSLKWIEWSTFYVNQSSSISFSVKGRLVGL 617

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            +K    ++   +  N   +  +DL+ C  LK   +    L +L +L L GC  L+ + E
Sbjct: 618 VMKGVVNKQPRIAFENCKTMKHVDLSYCGTLKETPNFSATL-NLEKLYLRGCTSLKVIHE 676

Query: 576 EIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHA 631
            + +L  L  L+L   D  EK PSS   L  L  L L  C++++ +P+L   S+   ++ 
Sbjct: 677 SVASLSKLVTLDLEGCDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASSNLKELYL 736

Query: 632 RHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           R C  L+ + +S   + RS     I +   C N
Sbjct: 737 RECDRLRIIHDS---IGRSLDKLIILDLEGCKN 766



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 37/179 (20%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDL 538
            LP+ + L SL  L    C  L++ PE   N++ L   +L  TAI  LPSSIG L  L +L
Sbjct: 872  LPSSLKLKSLDSLSFTNCYKLEQLPEFDENMKSLRVMNLNGTAIRVLPSSIGYLIGLENL 931

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP------------------------ 574
            +L +C+ L ++ + +  LKSL  L+L GC KL+  P                        
Sbjct: 932  NLNDCANLTALPNEIHWLKSLEELHLRGCSKLDMFPPRSSLNFSQESSYFKLTVLDLKNC 991

Query: 575  --------EEIGNL-ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                    E + N+  SLE LNL+   F  +P S++    L  L L+NCK LQ++ +LP
Sbjct: 992  NISNSDFLETLSNVCTSLEKLNLSGNTFSCLP-SLQNFKSLRFLELRNCKFLQNIIKLP 1049



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 13/190 (6%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           N  ++K + L  C  LK  P  S   N+E L L+  T+++ +  S+ +LS+LV LDL  C
Sbjct: 633 NCKTMKHVDLSYCGTLKETPNFSATLNLEKLYLRGCTSLKVIHESVASLSKLVTLDLEGC 692

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI--PSSMK 601
             L+   S    LKSL  LNLS C K+E++P ++    +L+ L L E D  +I   S  +
Sbjct: 693 DNLEKFPSSYLMLKSLEVLNLSRCRKIEEIP-DLSASSNLKELYLRECDRLRIIHDSIGR 751

Query: 602 QLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLTRSS---KHW 654
            L KL  L L+ CK L+ LP    +L     ++   C  L+T  +SS     S    K  
Sbjct: 752 SLDKLIILDLEGCKNLERLPIYTNKLESLELLNLASCLKLETFFDSSFRKFPSHLKFKSL 811

Query: 655 DIFNFSNCSN 664
            + N  +C N
Sbjct: 812 KVLNLRDCLN 821



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 99/434 (22%), Positives = 168/434 (38%), Gaps = 100/434 (23%)

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQ--VLGSYLKGMSEEEWESAVNKLKRM 368
           F +N F     +  ++E S   +  ++ +  +++  ++G  +KG+  ++   A    K M
Sbjct: 578 FPKNIFEYLPNSLKWIEWSTFYVNQSSSISFSVKGRLVGLVMKGVVNKQPRIAFENCKTM 637

Query: 369 PHMDIQKVLKVSYDGLDDEEQN---------IFLDTACFFK------GNDQYLVMNFLDA 413
            H+D+      SY G   E  N         ++L      K       +   LV   L+ 
Sbjct: 638 KHVDL------SYCGTLKETPNFSATLNLEKLYLRGCTSLKVIHESVASLSKLVTLDLEG 691

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           C    K   S L+ KSL  ++ ++    + + ++      +E       R R+ H     
Sbjct: 692 CDNLEKFPSSYLMLKSLEVLNLSRCRKIEEIPDLSASSNLKELYLRECDRLRIIHDS--- 748

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLK------------ETA 521
                      G +LD L  L L GC NL+R P  +  +E L+L             +++
Sbjct: 749 ----------IGRSLDKLIILDLEGCKNLERLPIYTNKLESLELLNLASCLKLETFFDSS 798

Query: 522 IEELPSSIG-------------NLSRLVD---------LDLTNCSGLKSVSSR------- 552
             + PS +              NL  + D         LDL  C  L+ +          
Sbjct: 799 FRKFPSHLKFKSLKVLNLRDCLNLEEITDFSMASNLEILDLNTCFSLRIIHESIGSLDKL 858

Query: 553 ------LCN----------LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
                 LC+          LKSL  L+ + C KLE+LPE   N++SL  +NL       +
Sbjct: 859 ITLQLDLCHNLEKLPSSLKLKSLDSLSFTNCYKLEQLPEFDENMKSLRVMNLNGTAIRVL 918

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTL-LTRSS 651
           PSS+  L  L +L L +C  L +LP     L     +H R C+ L      S+L  ++ S
Sbjct: 919 PSSIGYLIGLENLNLNDCANLTALPNEIHWLKSLEELHLRGCSKLDMFPPRSSLNFSQES 978

Query: 652 KHWD--IFNFSNCS 663
            ++   + +  NC+
Sbjct: 979 SYFKLTVLDLKNCN 992


>gi|297813715|ref|XP_002874741.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320578|gb|EFH51000.1| hypothetical protein ARALYDRAFT_327329 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1212

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 276/768 (35%), Positives = 390/768 (50%), Gaps = 135/768 (17%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P  + DVFLSFRG D R+NF  HL  AL    I++FIDD+L+RG+ ++ +L   IE SKI
Sbjct: 7   PSAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLHRGDNLT-ALFDRIEKSKI 65

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--------GYCPS-- 121
           +I+IFS  YA+S WCL ELVKILE +N+  Q+VVP+FY V+ SD         G  P   
Sbjct: 66  AIIIFSTNYANSAWCLRELVKILECRNRNQQLVVPIFYKVEKSDVKIQELTFPGVSPEEI 125

Query: 122 -------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESII 168
                        LG++ + +I TSE+ L++    D  KKL+DL PS N + LVG+ES +
Sbjct: 126 SSWKAALVSASNILGYV-VKEISTSEANLVDEIAVDTFKKLNDLAPSGN-EGLVGIESRL 183

Query: 169 KEIESQLLSGST--EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK- 225
           K +E +LLS       + +GI G+ GIGKTT+A  +Y  +   F+GS F+ NIR+ S + 
Sbjct: 184 KNLE-KLLSWEDLDSVHIIGIVGMVGIGKTTLADCLYGRMRGRFDGSCFLTNIRENSGRS 242

Query: 226 --------------------VGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
                               +G   N H  FERR L   ++LIV  D+ D KQI  L+G 
Sbjct: 243 GLEYLLQKLFSTVLNDRDLEIGAPGNAHERFERR-LKSKRLLIVLDDVNDEKQIRYLMGH 301

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
              +  GSR+IITTRD +L++  +G +    + + +L+  ++L LFS NAF  + P+  F
Sbjct: 302 CKWYQGGSRIIITTRDCKLIETIKGRK----YVLPKLNDREALKLFSLNAFNDSCPSKEF 357

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             L+N+V+ YA G PLAL+VLGS L       WE+ +++LK   H DI +VL+ SY+ L 
Sbjct: 358 EGLTNMVLDYAKGHPLALKVLGSDLCERDNLYWEAKLDRLKCRSHGDIYEVLETSYEELT 417

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
            E++N+FLD ACFF+  +   V + L++        I  LV K L+T+S+N+I MHD+LQ
Sbjct: 418 IEQKNVFLDIACFFRSENVDYVTSLLNSHGVDVSSVIKDLVDKCLITLSDNRIEMHDMLQ 477

Query: 446 EMGGEI-VRQESIKDPGKRS---------------RLWHPEDIYQVLN--ENTSLPTGIN 487
            MG EI ++ E+I   G R                RLW  EDI  +L   + T    GI 
Sbjct: 478 TMGKEISLKAETI---GIRDFTWLSRHGNQCQWHIRLWDSEDICDILTKGQGTDKIRGIF 534

Query: 488 LDS-------LKELYLGGCSNLKRFP------EISCNIE-DLDLKETAIEELPSSIGNL- 532
           LD+       L    L G  NLK            C +E  L L++  ++ LP+ +  L 
Sbjct: 535 LDTSKLRAMRLSAKALKGMYNLKYLKIYDSHCSRGCEVEFKLHLRK-GLDYLPNELTYLH 593

Query: 533 -------SRLVDLDLTNCSGLKSVSSR------------------------------LCN 555
                  S  +D D  N   LK   S+                              L N
Sbjct: 594 WHGYPLQSIPLDFDPKNLVDLKLPHSQLAEIWDDEKDAGMLKWVDLSHSLNLHQCLGLAN 653

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNC 614
            ++L RLNL GC  L+KLP  I  LE L YLNL +      +P  +K  S L  L L  C
Sbjct: 654 AQNLERLNLEGCTSLKKLPTTINGLEKLVYLNLRDCTSLRSLPKGLKTQS-LQTLILSGC 712

Query: 615 KRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            RL+  P +     +     T++K+L  S   L R +    + N  NC
Sbjct: 713 SRLKKFPLISENVEVLLLDGTAIKSLPESIETLRRLA----LLNLKNC 756



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 74/120 (61%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP G+   SL+ L L GCS LK+FP IS N+E L L  TAI+ LP SI  L RL  L+L
Sbjct: 694 SLPKGLKTQSLQTLILSGCSRLKKFPLISENVEVLLLDGTAIKSLPESIETLRRLALLNL 753

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK +SS L  LK L+ L LSGC +LE  PE   ++ESLE L + +    ++P  M
Sbjct: 754 KNCKKLKHLSSDLYKLKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPKMM 813



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 95/183 (51%), Gaps = 10/183 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L  L+EL L GCS L+ FPEI  ++E L+   + +TAI E+P  + +LS +    L   S
Sbjct: 769 LKCLQELILSGCSRLEVFPEIKEDMESLEILLMDDTAITEMPKMM-HLSNIQTFSLCGTS 827

Query: 545 GLKSVSSRLC----NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
              SVS            L  L LS C  L KLP+ IG L SL+ L L+  + E +P S 
Sbjct: 828 SQVSVSMFFMPPTLGCSRLTDLYLSRC-SLYKLPDNIGGLSSLQSLCLSGNNIENLPESF 886

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
            QL  L    L+ CK L+SLP LP     + A  C SL+TL N  T LT   +   +F F
Sbjct: 887 NQLHNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLETLENPLTPLTVGERIHSMFIF 946

Query: 660 SNC 662
           SNC
Sbjct: 947 SNC 949


>gi|357513933|ref|XP_003627255.1| NBS resistance protein [Medicago truncatula]
 gi|355521277|gb|AET01731.1| NBS resistance protein [Medicago truncatula]
          Length = 1079

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 278/836 (33%), Positives = 395/836 (47%), Gaps = 188/836 (22%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLS 63
           S +S + +P  K+DVF+SFRG D+R NF+SH+  A  R+KI  F D KL  G+EIS  L 
Sbjct: 29  SPTSSSPVPQIKYDVFVSFRGSDIRKNFLSHVLEAFSRKKIVVFSDKKLRGGDEIS-ELH 87

Query: 64  SAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC---- 119
           +AIE S IS+VIFS  +ASS WCL+ELVKI+E +  YG+I++PVFY V+PSD  +     
Sbjct: 88  TAIEKSLISLVIFSPNFASSHWCLDELVKIVECRANYGRILLPVFYQVEPSDVRHQNGSY 147

Query: 120 --------------PSLGW---------MGIFD---IPTSESVLIEGNVNDISKKLSDLF 153
                           L W         M  FD    P  ++ L+E  V ++  KL+ + 
Sbjct: 148 RDAFAQHEQKYNLNKVLSWRYALKQSANMSGFDSSHFP-DDAKLVEEIVQNVLTKLNQVD 206

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
              +K  L+G+E  I  IES L   S +   +GIWG+ GIGKTTIA  ++  + S +E  
Sbjct: 207 QGKSKG-LIGIEKQILPIESLLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLRSKYESC 265

Query: 214 YFMQNIRDESE--------------------------KVGGLANIHLNFERRRLSRMKVL 247
           YFM N+R+ESE                           + GL  +     ++RLSRMKVL
Sbjct: 266 YFMANVREESEGCRTNSLRLRKNLLSTLLEEEDLKDDMINGLPPL----VKKRLSRMKVL 321

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           IV  D+ D +Q+++LIG +D   PGSR+IITTRD Q+L      ++  ++EV+ L   +S
Sbjct: 322 IVLDDVKDAEQLEVLIGIVDWLGPGSRIIITTRDKQVL----AGKIDDIYEVEPLDSAES 377

Query: 308 LTLFSRNAFGQN-HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
             LF+ NAF ++ H    + ELS  ++ Y  GVPL L+ L + L+G  +  WE+    LK
Sbjct: 378 FQLFNLNAFTKHEHLEMEYYELSKKMVDYTAGVPLVLKALANLLRGKDKAIWETQSRNLK 437

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC--RFSAKIGISR 424
                ++  V ++ Y  LD  E+ IFLD ACFF G    L +  L      +S    + R
Sbjct: 438 IEQIENVHDVFRLIYTNLDYYEKIIFLDIACFFDGLKLKLELINLLLKDRHYSVSTKLDR 497

Query: 425 LVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-- 481
           L  K+LVTIS  N ++MHD++QE   EIV QES+++PG RSRL  P+DIY +LN++    
Sbjct: 498 LKDKALVTISQENIVSMHDIIQETAWEIVHQESVEEPGSRSRLLDPDDIYHILNDDKGGE 557

Query: 482 --LPTGINLDSLKELYLG-----------------------GCSNLKRFPEISCN-IEDL 515
                 I L  +KEL L                        G  +L R  E   N +  L
Sbjct: 558 SIRSMAIRLSEIKELQLSPRVFAKMSKLKFLDIYTKESKNEGRLSLPRGLEFLPNELRYL 617

Query: 516 DLKETAIEELPS--SIGNLSR-----------------LVDL---------------DLT 541
             +   +E LPS  S  NL R                 LV+L               D +
Sbjct: 618 RWEYYPLESLPSKFSAENLVRLSLPYSRLKKLWHGVKDLVNLNVLILHSSTLLTELPDFS 677

Query: 542 NCSGLKSVSSRLC-----------NLKSLRRLNLSGCLKLEKL----------------- 573
             + L  +  + C           +LK+L +L+LSGC+ L  L                 
Sbjct: 678 KATSLAVLDLQFCVGLTSVHPSVFSLKNLEKLDLSGCISLTSLQSNTHLSSLSYLSLYNC 737

Query: 574 --------------------------PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
                                     P  IG    L +LNL     E +P S+K L++L 
Sbjct: 738 TALKEFSVTSKHMSVLNLDGTSIKELPSSIGLQSKLTFLNLGRTHIESLPKSIKNLTRLR 797

Query: 608 DLRLQNCKRLQSLPELPCGSSIHA-RHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            L    C+ L++LPELP    + A   C SL+ +   ST   +  +      F NC
Sbjct: 798 QLGFFYCRELKTLPELPQSLEMLAVVGCVSLQNVEFRSTASEQLKEKRKKVAFWNC 853


>gi|357507539|ref|XP_003624058.1| TMV resistance protein N [Medicago truncatula]
 gi|355499073|gb|AES80276.1| TMV resistance protein N [Medicago truncatula]
          Length = 1127

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 279/748 (37%), Positives = 376/748 (50%), Gaps = 147/748 (19%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG+D R  F  HL AAL R+ I TF DDK L RG  IS  L +AI+ S  +I 
Sbjct: 20  YHVFLSFRGEDTRKGFTDHLCAALERKGITTFRDDKDLERGQVISEKLINAIKDSMFAIT 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GYCPSL 122
           + S  YASS WCL+EL  I+E  NK G  V+PVFY VDPSD              +    
Sbjct: 80  VLSPDYASSTWCLDELQMIMECSNK-GLEVLPVFYGVDPSDVRHQRGCFEESFRKHLEKF 138

Query: 123 G--------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
           G        W   F    S          E++L+E     I +KL    PS  ++ LVG+
Sbjct: 139 GQHSDRVDRWRDAFTQVASYSGWDSKGQHEALLVESIAQHIHRKLVPKLPSCTEN-LVGI 197

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
            S ++E+   L  G  +   +GIWG+GGIGKTTIA A+Y  I   F+ + F++N+R+ SE
Sbjct: 198 ASKVEEVNKLLGMGLNDVRFIGIWGMGGIGKTTIARAVYEAIQCEFQTTCFLENVREISE 257

Query: 225 KVGGLANI------HLNFER--------------RRLSRMKVLIVFYDLTDLKQIDLLIG 264
              GL +I      HL+  R                L R KVL+V  D+ ++ Q++ L G
Sbjct: 258 -ANGLVHIQRQLLSHLSISRNDFHNLYDGKKTIQNSLCRKKVLLVLDDVNEINQLENLAG 316

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           + D F PGSRVIITTRD   L  H    V   +EV  L  N++L +F   AF  + P  G
Sbjct: 317 KQDWFGPGSRVIITTRDKHWLITH---GVHQPYEVGMLFQNEALNVFCLKAFKGDKPQEG 373

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +L+LS  V++YA G+PLAL+VLGSYL G S + W SA+  ++  P  +IQ  LK+SY+ L
Sbjct: 374 YLDLSKEVVEYAGGLPLALEVLGSYLYGRSVDLWHSAIKNIRSAPLREIQDKLKISYESL 433

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKITMHD 442
           D  E+NIFLD +CFFKG  +  V+N L+ C +  +I I  L+ +SL+T+   NNK+ MHD
Sbjct: 434 DAMEKNIFLDISCFFKGMKRDKVINILENCGYHPEITIQVLIDRSLITLDRVNNKLGMHD 493

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT---------------------- 480
           LLQEMG  IV QES  DPGKRSRLW  EDI +VL +N                       
Sbjct: 494 LLQEMGRNIVIQESPNDPGKRSRLWSKEDIDRVLTKNKGTEKISSVVLNSLQPYEARWST 553

Query: 481 ---SLPTGINLDSLKELYLG---GC--SNLKRFPEISCNIE------------DLDLKET 520
              S+ T I L SL E++L     C  S+LK      C ++            D+ L  +
Sbjct: 554 EAFSMATQIKLLSLNEVHLPLGLSCLPSSLKVLRWRGCPLKTLAQTNQLDEVVDIKLSHS 613

Query: 521 AIEELPSSIG--------------NLSRLVD---------LDLTNCSGLKSVSSRLCN-- 555
            +E L   I               NL RL D         L L  C+ L  V   L +  
Sbjct: 614 QLELLWQGINFMENLKYLNLKFSKNLKRLPDFYGVPNLEKLILKGCASLTEVHPSLVHHN 673

Query: 556 ---------------------LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
                                + SL+ L LSGC + + LPE   ++E+L  L L      
Sbjct: 674 KVVLVNLEDCKSLEALPEKLEMSSLKELILSGCCEFKFLPEFGESMENLSILALQGTALR 733

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            + SS+ +L  L+DL L++CK L  LP+
Sbjct: 734 NLTSSLGRLVGLTDLNLKDCKSLVCLPD 761



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 6/130 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           +LP  + + SLKEL L GC   K  PE   ++E+L    L+ TA+  L SS+G L  L D
Sbjct: 688 ALPEKLEMSSLKELILSGCCEFKFLPEFGESMENLSILALQGTALRNLTSSLGRLVGLTD 747

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE---EIGNLESLEYLNLAEKDFE 594
           L+L +C  L  +   +  L SLR L++SGC KL +LP+   EI  LE L   + +  +  
Sbjct: 748 LNLKDCKSLVCLPDTIHGLNSLRVLDISGCSKLCRLPDGLKEIKCLEELHANDTSIDELY 807

Query: 595 KIPSSMKQLS 604
           ++P S+K LS
Sbjct: 808 RLPDSLKVLS 817



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 93/185 (50%), Gaps = 28/185 (15%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFP----EISCNIEDLDLKETAIEEL---PSSIGNLS 533
           LP  I+ L+SL+ L + GCS L R P    EI C +E+L   +T+I+EL   P S+  LS
Sbjct: 759 LPDTIHGLNSLRVLDISGCSKLCRLPDGLKEIKC-LEELHANDTSIDELYRLPDSLKVLS 817

Query: 534 -------------RLVDLDLTNCSGLKSVSSRL----CNLKSLRRLNLSGC-LKLEKLPE 575
                        R +  +    S       R      NL SL+ +NLS C L  E +P 
Sbjct: 818 FAGCKGTLAKSMNRFIPFNRMRASQPAPTGFRFPHSAWNLPSLKHINLSYCDLSEESIPH 877

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
               L SL  L+L   +F  IPSS+ +LSKL  L L  C++LQ LPELP     + A +C
Sbjct: 878 YFLQLTSLVSLDLTGNNFVTIPSSISELSKLELLTLNCCEKLQLLPELPPSIMQLDASNC 937

Query: 635 TSLKT 639
            SL+T
Sbjct: 938 DSLET 942


>gi|359493570|ref|XP_002270429.2| PREDICTED: uncharacterized protein LOC100253289 [Vitis vinifera]
          Length = 2663

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 252/731 (34%), Positives = 381/731 (52%), Gaps = 132/731 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R +F  HL +AL R  I TF DD+ L RG EI+P L  AIE S+ +I+
Sbjct: 21  YDVFLSFRGEDTRKSFTDHLYSALIRNNIHTFRDDEELPRGEEIAPELLKAIEESRSAII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQ-IVVPVFYLVDPSDAGYCPSL----------- 122
           +FS+ YA S+WCL ELVKI++ K +  Q +V+P+FY VDPS+      +           
Sbjct: 81  VFSKTYAHSKWCLEELVKIMKCKEEREQMVVIPIFYHVDPSELRNQTEIYGEAFTHHEKN 140

Query: 123 ----------GW---------MGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                      W         +  +D     E+ LI+  + ++ +           + +V
Sbjct: 141 ADEERKEKIRKWKIALRQASNLAGYDAKDRYETELIDKIIENVPRSFPKTLAV--TENIV 198

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G++  ++ + S L  G  +   VG++G+GGIGKTTI +A+Y+ IS+ FE    + ++R E
Sbjct: 199 GMDYRLERLISLLEIGLNDVRMVGVYGLGGIGKTTIINALYNRISNQFESVSLLTDVRKE 258

Query: 223 S-EKVGG--------------------LANIHLNFE--RRRLSRMKVLIVFYDLTDLKQI 259
           S E  GG                    L N+H   +  R +LS  +VL+   D+ +L Q+
Sbjct: 259 STENSGGLLKLQQQLLNDILGTTRKIVLRNVHEGIKEIRDKLSSKRVLVFLDDVDELTQL 318

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + LIG+ + F PGSR+IITTR   LL  H       ++EV++L+++++L LF   AF Q+
Sbjct: 319 EHLIGKHNWFGPGSRIIITTRKKDLLTRHEMK----MYEVEKLNFHEALQLFCLYAFKQH 374

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           H   G+ +LS+ V++YA+G+PLAL+VLGS L G    +W+S + KL ++P+M+I KVLK+
Sbjct: 375 HLKEGYGDLSHQVVRYADGLPLALKVLGSLLFGKRLSDWKSELRKLGKVPNMEIVKVLKI 434

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKI 438
           S+DGLD  ++ IFLD ACFF+G D   V   LD     A+ GI+ LV +  +TI  +N I
Sbjct: 435 SFDGLDYTQKMIFLDIACFFQGGDVEAVSRILDGSGCEAESGINVLVDRCFITILEDNTI 494

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI--NLDSLKEL 494
            MHDLL +MG  IV +E   +PG+RSRLW   DIY+VL  NT      GI  ++D+ +++
Sbjct: 495 DMHDLLAQMGKGIVDEECPNEPGERSRLWRHTDIYRVLKRNTGTEKIEGIFFHMDTSEQI 554

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETAIEELP----------SSIG-------------N 531
               C   KR   +   I    L    IE+LP          + +G             +
Sbjct: 555 QF-TCKAFKRMNRLRLLI----LSHNCIEQLPEDFVFPSDDLTCLGWDGYSLESLPPNFH 609

Query: 532 LSRLVDLDLTNCSGLKSVSSRLC----------------------NLKSLRRLNLSGCL- 568
            + LV L L+N +  +     +C                      N+ +L  LNLSGC+ 
Sbjct: 610 PNDLVFLGLSNSNIKRLWKGNMCLRNLRYINLNDSQQLIELPNFSNVPNLEELNLSGCII 669

Query: 569 --------------KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
                         +L   P+   ++  LE L+L     +++PSS++ L  L +L L NC
Sbjct: 670 LLKVHTHIRVFGCSQLTSFPKIKRSIGKLERLSLDNTAIKELPSSIELLEGLRNLYLDNC 729

Query: 615 KRLQSLPELPC 625
           K L+ LP   C
Sbjct: 730 KNLEGLPNSIC 740



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 91/174 (52%), Gaps = 32/174 (18%)

Query: 482 LPTGINLDSLKELYLGGC---------------SNLKRFPEISCNI---EDLDLKETAIE 523
           LP   N+ +L+EL L GC               S L  FP+I  +I   E L L  TAI+
Sbjct: 650 LPNFSNVPNLEELNLSGCIILLKVHTHIRVFGCSQLTSFPKIKRSIGKLERLSLDNTAIK 709

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           ELPSSI  L  L +L L NC  L+ + + +CNL+ L  L+L GC KL++LPE++  +  L
Sbjct: 710 ELPSSIELLEGLRNLYLDNCKNLEGLPNSICNLRFLEVLSLEGCSKLDRLPEDLERMPCL 769

Query: 584 EYLNLAEKDFEKIPS-------------SMKQLSKLSDLRLQNCKRLQSLPELP 624
           E L+L     + +PS              + QLS L  L L +CK++  +PELP
Sbjct: 770 EVLSLNSLSCQ-LPSLSEEGGTLSDMLVGISQLSNLRALDLSHCKKVSQIPELP 822



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 4/110 (3%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
            SLPT I    SLK L+   CS L+ FPEI  N+E+L    L  TAI+ELPSSI +L+RL 
Sbjct: 1664 SLPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQLHLNGTAIKELPSSIEHLNRLQ 1723

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
             L+L  C  L ++   +CNL+ L  LN++ C KL KLP+ +G L+SL+ L
Sbjct: 1724 VLNLERCKNLVTLPESICNLRFLEDLNVNYCSKLHKLPQNLGRLQSLKCL 1773



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 4/110 (3%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLV 536
            SLPT I    SLK L+   CS L+ FPEI     N+  L L  TAI+ELPSSI  L+RL 
Sbjct: 1106 SLPTIIWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHLNGTAIKELPSSIERLNRLQ 1165

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
             L+L  C  L ++   +CNL+ L  LN++ C KL KLP+ +G L+SL+ L
Sbjct: 1166 VLNLGRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQNLGRLQSLKRL 1215



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 4/90 (4%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLPT I    SLK L+   CS L+ FPEI  N+E   +L L  TAI+ELPSSI +L+RL 
Sbjct: 2562 SLPTSIREFKSLKSLFGSDCSQLQYFPEILENMENLRELHLNGTAIKELPSSIEHLNRLE 2621

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
             L+L  C  L ++    CNL  L  LN+  
Sbjct: 2622 LLNLDRCQNLVTLPGSTCNLCFLEVLNVCA 2651



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            L L  C  L+S+ + +   KSL+ L  S C +L+  PE + N+E+L  L+L     +++P
Sbjct: 1654 LCLRECKNLESLPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQLHLNGTAIKELP 1713

Query: 598  SSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTL 640
            SS++ L++L  L L+ CK L +LPE  C       ++  +C+ L  L
Sbjct: 1714 SSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCSKLHKL 1760



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 5/122 (4%)

Query: 505  FPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
             P I C    + L L+E   +E LP+SI     L  L  ++CS L+     L N+++LR+
Sbjct: 1642 LPPIECASEFDTLCLRECKNLESLPTSIWEFKSLKSLFCSDCSQLQYFPEILENMENLRQ 1701

Query: 562  LNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
            L+L+G   +++LP  I +L  L+ LNL   K+   +P S+  L  L DL +  C +L  L
Sbjct: 1702 LHLNG-TAIKELPSSIEHLNRLQVLNLERCKNLVTLPESICNLRFLEDLNVNYCSKLHKL 1760

Query: 621  PE 622
            P+
Sbjct: 1761 PQ 1762



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%)

Query: 529  IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
            I   S    L L  C  L+S+ + +   KSL+ L  S C +L+  PE +  +E+L  L+L
Sbjct: 1087 IERASEFDTLCLRECKNLESLPTIIWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHL 1146

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
                 +++PSS+++L++L  L L  CK L +LPE  C
Sbjct: 1147 NGTAIKELPSSIERLNRLQVLNLGRCKNLVTLPESIC 1183



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 515  LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L LK   I  LP  I + S    L L  C  L+S+ + +   KSL+ L  S C +L+  P
Sbjct: 2531 LCLKGQTINLLP--IEHASEFDTLCLRECKNLESLPTSIREFKSLKSLFGSDCSQLQYFP 2588

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            E + N+E+L  L+L     +++PSS++ L++L  L L  C+ L +LP   C
Sbjct: 2589 EILENMENLRELHLNGTAIKELPSSIEHLNRLELLNLDRCQNLVTLPGSTC 2639



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 522  IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
            +E LP+ I     L  L  ++CS L+     L  +++LR+L+L+G   +++LP  I  L 
Sbjct: 1104 LESLPTIIWEFKSLKSLFCSDCSQLQYFPEILETMENLRQLHLNG-TAIKELPSSIERLN 1162

Query: 582  SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
             L+ LNL   K+   +P S+  L  L DL +  C +L  LP+
Sbjct: 1163 RLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQ 1204



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 101/245 (41%), Gaps = 79/245 (32%)

Query: 482  LPTGIN-LDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETA-IEELPSSIGNLSRLV 536
            LP+ I  L+ L+ L LG C NL   PE  CN+   EDL++   + + +LP ++G L  L 
Sbjct: 1154 LPSSIERLNRLQVLNLGRCKNLVTLPESICNLRFLEDLNVNFCSKLHKLPQNLGRLQSLK 1213

Query: 537  ------------------------DLDLTNCSGLKSVS-SRLCNLKSLRRLNLSGC-LKL 570
                                    +LDL     ++ V  S +C L S+  L+LS C +  
Sbjct: 1214 RLRARGLNSRCCQLLSLSGLCSLKELDLIYSKLMQGVVLSDICCLYSVEVLDLSFCGIDE 1273

Query: 571  EKLPEEI------------GNL--------------------------------ESLEYL 586
              +P EI            GNL                                  L++L
Sbjct: 1274 GGIPTEICQLSSLQELLLIGNLFRSIPAGINQLSRLRLLVLSNCQELRQIPVLPSRLQHL 1333

Query: 587  NLAE-KDFEKIPSSMK--QLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSN 642
            NLA+  +   +P ++   QLSKL  L L +C+ L  +PELP    +   H CT L+ LS+
Sbjct: 1334 NLADCSNLVSLPEAICIIQLSKLRVLELSHCQGLLQVPELPPSLRVLDVHSCTCLEVLSS 1393

Query: 643  SSTLL 647
             S LL
Sbjct: 1394 PSCLL 1398


>gi|255562174|ref|XP_002522095.1| hypothetical protein RCOM_1382630 [Ricinus communis]
 gi|223538694|gb|EEF40295.1| hypothetical protein RCOM_1382630 [Ricinus communis]
          Length = 515

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 215/508 (42%), Positives = 297/508 (58%), Gaps = 61/508 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF+SFRG D+R  F+SHL  +LCR ++  F+D+ L+RG +I+ SL   IE S +S+V
Sbjct: 5   KYDVFISFRGADIRDGFLSHLYKSLCRNQVHAFVDENLDRGEDITSSLLEIIEQSYVSVV 64

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSE 134
           IFSE YA S WCL+ELVKILE K    QIV+PVFY VDP                I   +
Sbjct: 65  IFSENYAFSPWCLDELVKILECKTTMAQIVLPVFYRVDP----------------IHVQQ 108

Query: 135 SVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI-ESQLLSGSTEFN-----TVGIW 188
              + G   D   K  + F    K+ L  VE+  + + E+  ++G    N      VGIW
Sbjct: 109 ---LTGCFGDAIAKHREEF----KNSLRKVETWCQALKETTGMAGLVSQNIKYVRVVGIW 161

Query: 189 GIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV--------------------GG 228
           G+GGIGKTT+A  ++  +S  F    F  ++R+  EK                      G
Sbjct: 162 GMGGIGKTTVAVKVFDQVSGQFTSRCFFGDVRENLEKFTPDCLQRELLFQVLGKEISNAG 221

Query: 229 LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
           +  +  +  R+ LSR KVLIV  D++DLKQI+LLIG+   + P SR+I+T+RD QLL+N 
Sbjct: 222 MPIMLSSSIRKMLSRRKVLIVLDDVSDLKQIELLIGKHTSYGPRSRIIMTSRDKQLLQNA 281

Query: 289 RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
                  ++EV+EL+ +++L LF  +AF Q+ P  G++ LS   IKYA GVPLAL+VLGS
Sbjct: 282 GA----EIYEVEELNGSEALLLFCLHAFKQDSPKKGYMALSERAIKYAQGVPLALKVLGS 337

Query: 349 YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVM 408
            L     EEWE  + KLK     +I+KVL++SYD L + E+ IFLD ACF KG D+    
Sbjct: 338 NLYSRDVEEWEDELEKLKGASDEEIRKVLRISYDELCENEKEIFLDIACFLKGVDKDRAE 397

Query: 409 NFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
           + LD     ++IGI RL+ KSL++ISNN++ MHDLL++M  +I+ QE  K  GKRSRLW 
Sbjct: 398 SILDV--HGSRIGIRRLLDKSLISISNNELDMHDLLEQMAKDIICQE--KQLGKRSRLWQ 453

Query: 469 PEDIYQVLNENTSLPTGINLDSLKELYL 496
             DI+      T    GI+LD   +L L
Sbjct: 454 ATDIHN----GTEAIKGISLDMSSDLEL 477


>gi|224122448|ref|XP_002318839.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859512|gb|EEE97059.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 937

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 261/720 (36%), Positives = 383/720 (53%), Gaps = 105/720 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL  AL +  I TF DD +L RG +IS  L  AI+ SK+SIV
Sbjct: 3   YDVFLSFRGEDTRKNFTDHLYTALLQAGIRTFRDDDELLRGEKISSQLPKAIQESKVSIV 62

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           +FS+GYASS WCL+EL +IL+ ++  GQIV+PVFY + PSD                   
Sbjct: 63  VFSKGYASSTWCLDELEEILDCRHTTGQIVLPVFYDIGPSDIRKQTGSFAEAFDRHEERF 122

Query: 119 ----------------CPSLGWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                             +L  + +  +    ES  ++  V ++S KL+  +  +     
Sbjct: 123 KEEMEKVQKWRKALVEAANLSGLDLHSVANGHESKFVQKIVQEVSSKLNPRY-MNVATYP 181

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S +K+I + L  G+ E  TVGI+G+ GIGKT IA A+++ +   FEGS F+ NIR 
Sbjct: 182 VGIDSQVKDIIAMLSVGTNEVRTVGIYGMPGIGKTAIAKAVFNQLCHKFEGSCFLLNIRK 241

Query: 222 ESEKVGGLANIH--------------------LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            S++  GL  +                     +N  + +  R +VL++  D    +QI  
Sbjct: 242 SSDQHNGLVQLQEQLLFDSLTGKIWFADVDAGINGIKSQFCRKRVLVILDDFDQSEQIHA 301

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G    F PGSR++ITTRD  LL       V   +  KEL++ +SL LFS +AF + HP
Sbjct: 302 LVGERGWFGPGSRIVITTRDEHLLTQ---LEVVKKYPAKELNHEESLQLFSWHAFREPHP 358

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              ++ELS +++ Y  GVPLAL+V+GSYL   S  +W SA+ KLK++PH  IQ+ LK S+
Sbjct: 359 VTEYVELSKVLVDYVGGVPLALEVVGSYLFRRSIPQWTSAIEKLKKIPHHQIQRQLKTSF 418

Query: 382 -DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
            D   D+ +++FLD ACFF G D+  V   LD   F  +I I+ L  +SL+T+ S NK+ 
Sbjct: 419 DDLDGDKLKDMFLDIACFFIGMDKDYVGKILDGRGFYPEIDINILRERSLLTVNSENKLQ 478

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--NTSLPTGINLDSL--KELY 495
           MH+LL++MG EI+RQ    +PGKRSRLW  ED+ +VL +   T +  GI LD+   K+ +
Sbjct: 479 MHNLLRDMGREIIRQMD-PNPGKRSRLWLHEDVMEVLGKCSGTEVVEGIMLDAQASKDAF 537

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG------LKSV 549
           L   S     P  S   +D+ +  T+           +R+  L L   SG       + V
Sbjct: 538 LSTTSFA---PTTSQASKDVVVSTTS----------FARMTSLQLLQFSGGQLRGHCEHV 584

Query: 550 SSRL-------CNLKSL-RRLNLSGCLKLE-------KLPEEIGNLESLEYLNLAEKDFE 594
           S  L       C++++L  +  L   + L+       +L +E   L +L+ L+L+   F 
Sbjct: 585 SEALIWLCWHKCSMRTLPHKFQLDSLVVLDMQHSEIRELWKETKCLNNLKVLDLSHSMFF 644

Query: 595 KIPSSMKQLSKLSDLRLQNCKRL----QSLPELPCGSSIHARHCTSLKTLSNS--STLLT 648
               +   L  L  L L+NCKRL    QS+ EL     ++ + C+SLK L  S  STL T
Sbjct: 645 VKTPNFSGLPSLETLILENCKRLADIHQSIGELKKLVFLNLKGCSSLKNLPESLPSTLET 704



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 32/197 (16%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           SLP+     +L+ L   GC +L++FPE   N++ L      ET +  LPSSIGNL +L  
Sbjct: 697 SLPS-----TLETLNTTGCISLEKFPENLGNMQGLIEVQANETEVHHLPSSIGNLKKLKK 751

Query: 538 LDLT---------NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
           L +          + SGL S+++   + + L   N S  L         G+L SL+ L L
Sbjct: 752 LFIVLKQQPFLPLSFSGLSSLTTLHVSNRHLSNSNTSINL---------GSLSSLQDLKL 802

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
           A  DF ++P+ +  L KL  L L  C+ L  + E+P    ++ A  C SL+ +    ++ 
Sbjct: 803 ASNDFSELPAGIGHLPKLEKLDLSACRNLLFISEIPSSLRTLVALDCISLEKIQGLESVE 862

Query: 648 TRSSKHWDIFNFSNCSN 664
            +      +    NC+N
Sbjct: 863 NKP-----VIRMENCNN 874



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 37/195 (18%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDL-------KETAIEELPS---- 527
           +LP    LDSL  L +      + + E  C  N++ LDL       K      LPS    
Sbjct: 600 TLPHKFQLDSLVVLDMQHSEIRELWKETKCLNNLKVLDLSHSMFFVKTPNFSGLPSLETL 659

Query: 528 -------------SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
                        SIG L +LV L+L  CS LK++   L +  +L  LN +GC+ LEK P
Sbjct: 660 ILENCKRLADIHQSIGELKKLVFLNLKGCSSLKNLPESLPS--TLETLNTTGCISLEKFP 717

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIH 630
           E +GN++ L  +   E +   +PSS+  L KL  L +     L+  P LP      SS+ 
Sbjct: 718 ENLGNMQGLIEVQANETEVHHLPSSIGNLKKLKKLFIV----LKQQPFLPLSFSGLSSLT 773

Query: 631 ARHCTSLKTLSNSST 645
             H ++ + LSNS+T
Sbjct: 774 TLHVSN-RHLSNSNT 787


>gi|105922867|gb|ABF81441.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105922933|gb|ABF81445.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1378

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 253/710 (35%), Positives = 374/710 (52%), Gaps = 109/710 (15%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRGKD R+NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+
Sbjct: 78  PQYMYDVFLSFRGKDTRNNFTSHLYSNLAQRGIDVYMDDRELERGKTIEPALWKAIEESR 137

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSLG-- 123
            S++IFS  YASS WCL+ELVKI++   + G  V+PVFY VDPS+       Y  +    
Sbjct: 138 FSVIIFSGDYASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSEVAERKGQYQKAFVEH 197

Query: 124 -------------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                        W       T+          ES  IE     IS KLS   P      
Sbjct: 198 EQNFKENLEKVWIWKDCLSTVTNLSGWDVRKRNESESIEIIAEYISYKLSVTMPVSK--N 255

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           L+G++S ++ +   +     E   +GI G+GGIGKTT+A  +Y      F+GS F+ N+R
Sbjct: 256 LIGMDSRLEILNGYIGEEVGEAIFIGICGMGGIGKTTVARVVYDRFRWQFKGSCFLANVR 315

Query: 221 ---DE------------SEKVGGLANI-----HLNFERRRLSRMKVLIVFYDLTDLKQID 260
              DE            SE +   ANI      +   +R+L R K+LIV  D+ D KQ++
Sbjct: 316 EVFDEKDGPRRLQEQLVSEILMKRANICDSSRGIEMIKRKLQRKKILIVLDDVDDRKQLE 375

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L      F PGSR+IIT+RD Q+L  +    V  ++E ++L+ +D+L LFS+ AF  + 
Sbjct: 376 SLAAESKWFGPGSRIIITSRDRQVLTRNG---VARIYEAEKLNDDDALMLFSQKAFKNDQ 432

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           PA  F+ELS  V+ YANG+PLAL+V+GS++ G S  EW SA+N+L  +P  +I  VL++S
Sbjct: 433 PAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSILEWGSAINRLNEIPDREIIDVLRIS 492

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           +DGL + E+ IFLD ACF KG  +  ++  LD+C F A IG   L+ KSL+++S +++ M
Sbjct: 493 FDGLHELEKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSRDQVWM 552

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----PTGINLDSLKELYL 496
           H+LLQ MG EIVR ES ++PG+RSRLW  ED+   L +NT         +++  +KE   
Sbjct: 553 HNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDIPGIKEAQW 612

Query: 497 GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR--------------------LV 536
               N+K F ++S  +  L +    + E P  + N  R                    LV
Sbjct: 613 ----NMKAFSKMS-KLRLLKINNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDELV 667

Query: 537 DLDLTNCS------GLKSV----------------SSRLCNLKSLRRLNLSGCLKLEKLP 574
           +L + N S      G KS                 S  L  + +L  L L GC+ L ++ 
Sbjct: 668 ELHMANSSIEQLWYGYKSAVKLKIINLSNSLYLSKSPDLTGIPNLESLILEGCISLSEVH 727

Query: 575 EEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             +G  + L+Y+NL   +    +PS++ ++  L    L  C +L++ P++
Sbjct: 728 PSLGRHKKLQYVNLINCRSIRILPSNL-EMESLKFFTLDGCSKLENFPDI 776



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 5/146 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GCS L+ FP+I  N+     L L  T I EL  SI ++  L  L
Sbjct: 750 LPSNLEMESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVL 809

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + NC  L+S+S  +  LKSL++L+LSGC +L+ +P  +  +ESLE  +++     ++P+
Sbjct: 810 SMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPA 869

Query: 599 SMKQLSKLSDLRLQNCK--RLQSLPE 622
           S+  L  L+ L L   +   L++LPE
Sbjct: 870 SIFLLKNLAVLSLDGLRACNLRALPE 895



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 58   ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-QIVVPVFYLVDPS 114
            I   L  AIE S +SI+IF+  +AS  WC  ELVKI+   N+     V PV Y V  S
Sbjct: 1140 IRSRLFEAIEESGLSIIIFASDWASLPWCFGELVKIVGFMNEMRLDTVFPVSYDVKQS 1197


>gi|359493404|ref|XP_003634588.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1102

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 272/782 (34%), Positives = 386/782 (49%), Gaps = 162/782 (20%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VFLSFR +D R+NF  HL   L    I+TF DD+L RG EI   L   IE S+ISIV+F
Sbjct: 21  EVFLSFRSEDTRNNFTDHLFVNLDGMGIKTFRDDQLERGEEIKSELLKTIEESRISIVVF 80

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------GYCPSLGWMGI-- 127
           S+ YA S+WCL+EL KI+E + +  QIV PVFY VDP D        G   S+    +  
Sbjct: 81  SKNYAHSKWCLDELAKIMECREEMEQIVFPVFYHVDPCDVQKQTGSFGEAFSIHERNVDV 140

Query: 128 ------FDIPTSESVLIEGNVND------ISKKLSDLFPSDNKDQL-------VGVESII 168
                  D  T  S L   +VND      I + ++ +F      +L       VG++  +
Sbjct: 141 KKVQRWRDSLTEASNLSGFHVNDGYESKHIKEIVNLIFKRSMNSKLLHINEDIVGMDFRL 200

Query: 169 KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK--- 225
           KE++S L S   +   VGI+GIGGIGKTTIA  +Y+ I   F G+ F+Q++R+   K   
Sbjct: 201 KELKSLLSSDLNDIRVVGIYGIGGIGKTTIAKIVYNEIQYQFTGASFLQDVRETFNKGCQ 260

Query: 226 -----------VGG---LANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
                      VG     +NI+  +N  + RL   KVLIV  D+  L+Q++ + G    F
Sbjct: 261 LQLQQQLLHDIVGNDEKFSNINKGINIIKDRLGSKKVLIVIDDVDRLQQLESVAGSPKWF 320

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
            PGS +IITTRD  LL  + G  + H  +  EL Y ++L LFS++AF QN P   +++LS
Sbjct: 321 GPGSTIIITTRDQHLLVEY-GVTISH--KATELHYEEALQLFSQHAFKQNVPKEDYVDLS 377

Query: 330 NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQ 389
           N +++YA G+PLAL+VLGS L+GM+ +EW+SA +K K+ P  +I  VL++S+DGLD  ++
Sbjct: 378 NCMVQYAQGLPLALKVLGSSLQGMTIDEWKSASDKSKKNPMKEINDVLRISFDGLDPSQK 437

Query: 390 NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG 449
            +FLD ACFFKG  +  V   LD C   A   I  L  + LVTI +N I MHDL+QEMG 
Sbjct: 438 EVFLDIACFFKGECKDFVSRILDGCNLFATCNIRVLRDRCLVTILDNVIQMHDLIQEMGW 497

Query: 450 EIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYLGGCSNLKRF 505
            IVR+E   DP K SRLW  +DIY   ++   +       ++L   +E+      N K F
Sbjct: 498 AIVREECPGDPCKWSRLWDVDDIYDAFSKQEEMQNIQTISLDLSRSREIQF----NTKVF 553

Query: 506 P--------EISCNIED------------------------------------------- 514
           P        +I CN  D                                           
Sbjct: 554 PKMKKLRLLKIYCNDHDGLPREEYKVLLPKDFEFPHDLRYLHWQRCTLTSLPWNFYGKHL 613

Query: 515 --LDLKETAIEELPSSIGNLSRLVDLDLTN-----------------------CSGLKSV 549
             ++LK + I++L      L  L  +DL+N                       C+ L+ +
Sbjct: 614 LEINLKSSNIKQLWKGNKRLKELKGIDLSNSKQLVKMPKFSSMPNLERLNLEGCTRLREL 673

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN---------------------- 587
            S + +L  L  LNL  C  L+ LP  I  L+SLE L+                      
Sbjct: 674 HSSIGHLTRLDPLNLENCRNLKSLPNSICGLKSLEGLSLNGCSNLEAFSEITEDMEQLER 733

Query: 588 --LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLS 641
             L E    ++PSS++ +  L  L L NC+ L +LP     L C +S+H R+C  L  L 
Sbjct: 734 LFLRETGISELPSSIEHMRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLP 793

Query: 642 NS 643
           ++
Sbjct: 794 DN 795



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 99/190 (52%), Gaps = 31/190 (16%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLP  I  L SL+ L L GCSNL+ F EI+ ++E L+   L+ET I ELPSSI ++  L 
Sbjct: 696 SLPNSICGLKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHMRGLK 755

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP---------------------- 574
            L+L NC  L ++ + + NL  L  L++  C KL  LP                      
Sbjct: 756 SLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLME 815

Query: 575 EEIGN----LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
           EEI N    L SLE+LN++E     IP+ + QL KL  L + +C  L+ + ELP     I
Sbjct: 816 EEIPNDLWCLSSLEFLNVSENHMRCIPAGITQLCKLGTLLMNHCPMLEVIGELPSSLGWI 875

Query: 630 HARHCTSLKT 639
            A  C SL+T
Sbjct: 876 EAHGCPSLET 885


>gi|15238008|ref|NP_197270.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
           thaliana]
 gi|332005072|gb|AED92455.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
           thaliana]
          Length = 1294

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 254/707 (35%), Positives = 373/707 (52%), Gaps = 97/707 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K DVF+SFRG+DVR  FVSHL     R  I+ F DD  L RG  ISP L  AI+GS+ +I
Sbjct: 17  KTDVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISPELIDAIKGSRFAI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------ 115
           V+ S  YA+S WCL+EL+KI+E  NK    +VP+FY VDPSD                  
Sbjct: 77  VVVSRNYAASSWCLDELLKIMEC-NK--DTIVPIFYEVDPSDVRRQRGSFGEDVESHSDK 133

Query: 116 ---AGYCPSLGWMGIFDIPTS----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESII 168
                +  +L  +       S    +S LI+  V DIS KL      D+K  L+G+ S +
Sbjct: 134 EKVGKWKEALKKLAAISGEDSRNWDDSKLIKKIVKDISDKLVSTSWDDSKG-LIGMSSHM 192

Query: 169 KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD------- 221
             ++S +     +   +GIWG+GG+GKTTIA  +Y+ +S  F+   FM+N+++       
Sbjct: 193 DFLQSMISIVDKDVRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCFMENVKEVCNRYGV 252

Query: 222 -------------ESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
                        E +K    +    N  + R     V IV  D+   +Q++ L+     
Sbjct: 253 RRLQVEFLCRMFQERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDRSEQLNELVKETGW 312

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA-GFLE 327
           F PGSR+I+TTRD  LL +H    +  V++VK L   ++L LF   AF +      GF E
Sbjct: 313 FGPGSRIIVTTRDRHLLLSH---GINLVYKVKCLPKKEALQLFCNYAFREEIILPHGFEE 369

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LS   + YA+G+PLAL+VLGS+L   S+ EWES + +LK  PH DI +VL+VSYDGLD++
Sbjct: 370 LSVQAVNYASGLPLALRVLGSFLYRRSQIEWESTLARLKTYPHSDIMEVLRVSYDGLDEQ 429

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           E+ IFL  +CF+       V   LD C ++A+IGI+ L  KSL+  SN  + +HDLL++M
Sbjct: 430 EKAIFLYISCFYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLIVESNGCVKIHDLLEQM 489

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI--NLDSLKELY-----LGG 498
           G E+VRQ+++ +P +R  LW PEDI  +L+EN  T L  GI  NL  + E++       G
Sbjct: 490 GRELVRQQAVNNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEISEVFASDRAFEG 549

Query: 499 CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR-----------------------L 535
            SNLK       N  DL         LP+ +  L R                       L
Sbjct: 550 LSNLKLL-----NFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFFPEFL 604

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
           V+L ++N S L+ +   +  L++L++++LS C  L ++P ++    +LE LNL+  +   
Sbjct: 605 VELCMSN-SNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYCQSLV 662

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLK 638
           ++  S+K L  LS   L NC +L+ +P    L    ++    C+SLK
Sbjct: 663 EVTPSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLK 709



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 93/161 (57%), Gaps = 21/161 (13%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P GI L SL+ + + GCS+LK FPEIS N   L L  T IEELPSSI  LS LV LD++
Sbjct: 688 IPIGIILKSLETVGMSGCSSLKHFPEISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMS 747

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL------------------ 583
           +C  L+++ S L +L SL+ LNL GC +LE LP+ + NL SL                  
Sbjct: 748 DCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVS 807

Query: 584 ---EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
              E L ++E   E+IP+ +  LS+L  L +   KRL SLP
Sbjct: 808 TSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLP 848



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 38/198 (19%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFP-----EISCNIEDLDLKETAIEELPSSIGNL- 532
             SLP  I+ L SL++L L GCS L+ FP      +SC +   DL  T+I+ELP +IGNL 
Sbjct: 845  ASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSC-LRWFDLDRTSIKELPENIGNLV 903

Query: 533  -------------------SRLVDLDL--------TNCSGLKSVSSRLCNLKSLRRLNLS 565
                               +RL  L +        T    L S+   L     LR L+LS
Sbjct: 904  ALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLS 963

Query: 566  GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELP 624
              + + ++P  IGNL +L  L+L+  +FE IP+S+K+L++L+ L L NC+RLQ+LP ELP
Sbjct: 964  N-MNMTEIPNSIGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP 1022

Query: 625  CG-SSIHARHCTSLKTLS 641
             G   I+   CTSL ++S
Sbjct: 1023 RGLLYIYIHSCTSLVSIS 1040



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 24/151 (15%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           NL SL+ L + GC N+  FP +S +IE L + ET+IEE+P+ I NLS+L  LD++    L
Sbjct: 785 NLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRL 844

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLE------------------------KLPEEIGNLES 582
            S+   +  L+SL +L LSGC  LE                        +LPE IGNL +
Sbjct: 845 ASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVA 904

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
           LE L  +     + P S+ +L++L  L + N
Sbjct: 905 LEVLQASRTVIRRAPWSIARLTRLQVLAIGN 935



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 36/208 (17%)

Query: 467 WHPEDIYQVLNENTSLPT---GIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET 520
           + PE + ++   N++L     GI  L +LK++ L  C  L   P++S   N+E+L+L   
Sbjct: 599 FFPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYC 658

Query: 521 -AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC------------ 567
            ++ E+  SI NL  L    LTNC  LK +   +  LKSL  + +SGC            
Sbjct: 659 QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGII-LKSLETVGMSGCSSLKHFPEISWN 717

Query: 568 --------LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
                    K+E+LP  I  L  L  L++++ +    +PS +  L  L  L L  C+RL+
Sbjct: 718 TRRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLE 777

Query: 619 SLPELPCGSSIHARHCTSLKTLSNSSTL 646
           +LP+         ++ TSL+TL  S  L
Sbjct: 778 NLPD-------TLQNLTSLETLEVSGCL 798


>gi|357513207|ref|XP_003626892.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520914|gb|AET01368.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 908

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 248/678 (36%), Positives = 372/678 (54%), Gaps = 80/678 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRGKD R+NFVSHL AAL   +I TF+DD+ L +GNE+ P L  AI+GS++ IV
Sbjct: 36  YDVFINFRGKDTRNNFVSHLYAALTNVRINTFLDDEELGKGNELGPELLQAIQGSQMFIV 95

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFD----- 129
           +FSE YA S WCL+EL++I+E +   GQ+V+PVFY + PSD        +   F+     
Sbjct: 96  VFSENYARSSWCLDELLQIMECRANKGQVVMPVFYGISPSDIRQLALRRFGEAFNNNTDE 155

Query: 130 ------IPTSESVLIEG--------NVNDISKKLSDLFPSDNKDQL------VGVESIIK 169
                 +  S++  + G          N + + +S +    +K  L      VG+ES  +
Sbjct: 156 LDQLIYMALSDASYLAGWDMSNYSNESNTVKQIVSQVLTKLDKKYLPLPDFPVGLESRAE 215

Query: 170 EIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGL 229
           +    L   S     VGIWG+GGIGK+TIA  IY+N+   FE   F+ NIR+  EK  G 
Sbjct: 216 QSIRYLRHNSDGVCLVGIWGMGGIGKSTIAKVIYNNLCYEFEDQSFLANIREVWEKDRGR 275

Query: 230 ANIHLNFE---------------------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
            ++                          + RL   + L+V  D+++  Q + L G  +G
Sbjct: 276 IDLQEQLLSDILKTRKIKVHSVEFGKAMIKERLVTKRALVVLDDVSEFDQFNSLCGNRNG 335

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
             PGS +IITTRDV+LL +  G  V  ++E + L+  +SL LFS++AF +  P  GFL L
Sbjct: 336 IGPGSIIIITTRDVRLL-DILG--VDFIYEAEGLNSVESLELFSQHAFRETSPIEGFLIL 392

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE- 387
           S  V+ Y  G+PLAL+VLGSYL    ++EW+S ++KL+++P+  I + LK+S+DGL D  
Sbjct: 393 SRYVVAYCGGLPLALEVLGSYLFKRRKQEWQSVLSKLEKIPNDQIHEKLKISFDGLRDHM 452

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQE 446
           E++IFLD  CFF G D+  V N L+ C   A IGI+ L+ +SL+ I   NK+ MHDLL++
Sbjct: 453 EKDIFLDVCCFFIGKDRAYVTNILNGCGLHADIGITVLIERSLIKIEKYNKLGMHDLLRD 512

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT-----------------GINLD 489
           MG EIVR+ S ++P KRSRLW+ ED+  VL ++T                      I  +
Sbjct: 513 MGREIVRESSPEEPEKRSRLWYHEDVVDVLTDHTGTKAIEGLVMKLQRSSRVGFDAIGFE 572

Query: 490 SLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
            +K L L    +++   +  C   ++  L  +   ++ +P +      LV +DL + S L
Sbjct: 573 KMKRLRLLQLDHVQVIGDYECFSKHLSWLSWQGFPLKYMPENFYQ-KNLVAMDLKH-SNL 630

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE---KIPSSMKQL 603
             V  R   L+ L+ LNLS  + L   P +   L +LE  NL  KD +   ++ SS+  L
Sbjct: 631 TQVWKRPQMLEGLKILNLSHSMYLTSTP-DFSKLPNLE--NLIMKDCQSLFEVHSSIGDL 687

Query: 604 SKLSDLRLQNCKRLQSLP 621
            KL  +  ++C  L++LP
Sbjct: 688 KKLLLINFKDCTSLRNLP 705



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 66/108 (61%), Gaps = 5/108 (4%)

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
           +YL    +  + P    N+E+L +K+  ++ E+ SSIG+L +L+ ++  +C+ L+++   
Sbjct: 652 MYLTSTPDFSKLP----NLENLIMKDCQSLFEVHSSIGDLKKLLLINFKDCTSLRNLPRE 707

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +  L S++   LSGC K+EKL E+I  ++SL  L  A+   +++P S+
Sbjct: 708 IYQLTSVKTFILSGCSKIEKLEEDIVQMKSLTTLIAAKTGVKQVPFSI 755


>gi|357499381|ref|XP_003619979.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494994|gb|AES76197.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1033

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 257/702 (36%), Positives = 371/702 (52%), Gaps = 102/702 (14%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVI 75
           DVF+SFRG D R  F  +L  AL  + I TFIDDK L +G+EI+PSL   IE S+I+I++
Sbjct: 20  DVFISFRGTDTRFGFTGNLYKALSDKGIRTFIDDKELQKGDEITPSLLKRIEESRIAIIV 79

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------- 123
           FS+ YASS +CL+ELV I+    + G++V+PVFY V+PS     +  Y  +L        
Sbjct: 80  FSKEYASSSFCLDELVHIIHYFKEKGRLVLPVFYDVEPSHVRHQNYSYGEALAKHEERFQ 139

Query: 124 -----------WM----GIFDIP--------TSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                      W      + D+           E   IE  V D+S K++ + P    D 
Sbjct: 140 KSKKNMERLLKWKIALNKVADLSGYHFNLGNEYERDFIEKIVTDVSYKINHV-PLHVADY 198

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG++S I E+ S    GS +    +GI G GG+GKTT+A A+Y+ I++ FE   F+ N+
Sbjct: 199 LVGLKSRISEVNSLSELGSNDGVCMIGILGTGGMGKTTLAQAVYNLIANQFECKCFLHNV 258

Query: 220 RDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           R+ S K G                   G  N  +   +RRL + KVL++  D+  +KQ+ 
Sbjct: 259 RENSVKHGLEYLQEQLLSKSIGFETKFGHVNEGIPIIKRRLYQKKVLLILDDVDKIKQLQ 318

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           +LIG       GSRVIITTRD  LL  H    +  ++E   L+   +L L    AF  N 
Sbjct: 319 VLIGEPGWLGRGSRVIITTRDKHLLSCHG---IKKIYEADGLNKEQALELLRMMAFKSNK 375

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
             + +  + N  +KYA G+PLAL+V+GS L G +  E ES ++K +R+PH DIQK+LKVS
Sbjct: 376 NDSRYDSILNRAVKYAAGLPLALEVVGSNLFGKTIAECESLLDKYERIPHEDIQKILKVS 435

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISRLVGKSLVTISNNK-- 437
           +D LD+E+QN+FLD  C FKG+ +  + N L D   +  K  +  LV KSL+ I  N   
Sbjct: 436 FDALDEEQQNVFLDIVCVFKGHPEEYIQNLLHDHYGYCIKSHLRVLVDKSLIKIKANYYC 495

Query: 438 -ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLKEL 494
            +T+HDL+++MG EI+RQESI++PG+RSRLW  +DI  VL EN  TS    I LD     
Sbjct: 496 GVTLHDLIEDMGIEIIRQESIREPGERSRLWSRDDIVHVLQENTGTSKIEMIYLDRSIAK 555

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETAIEELPS-SIGNLSRLVDLDLTNCSGLKSVSSRL 553
           +L G + +  F +++ N++ L ++  A  E P+ S G       L +  C+G  S S   
Sbjct: 556 HLRGMNEMV-FKKMT-NLKTLHIQSYAFTEGPNFSKGPKYLPSSLRILECNGCTSESLSS 613

Query: 554 C----------------------------NLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           C                             L +L+  +  GC++L  +   +G L  L+ 
Sbjct: 614 CFSNKKKFNNMKILTLDNSDYLTHIPDVSGLPNLKNFSFQGCVRLITIHNSVGYLNKLKI 673

Query: 586 LNLAE--KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           LN AE  +  E  PS   QL  L +L+L  C+ L+S PEL C
Sbjct: 674 LN-AEYCEQLESFPSL--QLPSLEELKLSECESLKSFPELLC 712



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 8/178 (4%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET----AIEELPSSIGNLSRL 535
           T +P    L +LK     GC  L         +  L +        +E  PS    L  L
Sbjct: 636 THIPDVSGLPNLKNFSFQGCVRLITIHNSVGYLNKLKILNAEYCEQLESFPSL--QLPSL 693

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            +L L+ C  LKS    LC + +++ + +     + +LP   GNL  L  L +   +F+ 
Sbjct: 694 EELKLSECESLKSFPELLCKMTNIKEITIYET-SIGELPFSFGNLSELRRLIIFSDNFKI 752

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
           +P  + +   L ++ +  C  L+ +  +P     + A  C SL + S    L  + +K
Sbjct: 753 LPECLSECHHLVEVIVDGCYSLEEIRGIPPNLERLSAVDCESLSSASRRMLLSQKLNK 810


>gi|356515308|ref|XP_003526343.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1464

 Score =  354 bits (908), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 260/710 (36%), Positives = 386/710 (54%), Gaps = 100/710 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F   L   L +  I  FIDD KL RG EISP+L  AIE S+I+I+
Sbjct: 20  YDVFLSFRGEDTRRTFTGSLYHGLHQRGINVFIDDEKLRRGEEISPALIGAIEESRIAII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FS+ YASS WCL+EL KILE     GQ+V PVF+ VDPS        +  ++       
Sbjct: 80  VFSQNYASSTWCLDELAKILECYKTRGQLVWPVFFHVDPSAVRHQRGSFATAMAKHEDRF 139

Query: 124 ---------W-MGIFDIPT---------SESVLIEGNVNDISKKLSDL------FPSDNK 158
                    W M +F+             E  LI+  + + S+KL+        +P    
Sbjct: 140 KGDVQKLQKWKMALFEAANLSGWTLKNGYEFKLIQEIIEEASRKLNHTILHIAEYP---- 195

Query: 159 DQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
              VG+E+ I E++  L +    +   +GI+G+GGIGKTTIA A+Y+ I+  FE + F+ 
Sbjct: 196 ---VGIENRISELKLLLHIEPGEDIRVIGIYGLGGIGKTTIARALYNLIAGQFEATSFLT 252

Query: 218 NIRDESEKVGGLANIH--LNFE-------------------RRRLSRMKVLIVFYDLTDL 256
           +IR+ S +  GL  +   L F+                   ++RL   KVL++  D+  L
Sbjct: 253 DIRESSNQRQGLVQLQETLLFDTVGDKNIKLGSIYKGIPIIKKRLCCKKVLLILDDVDKL 312

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q+  L G  D F  GS +IITTRD  LL      +V   +EVK+L+++++  LF+ +AF
Sbjct: 313 EQLQALAGGRDWFGFGSVIIITTRDKHLLA---AQQVDKTYEVKKLNHDEAFDLFTWSAF 369

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
            +  P AG+ ++SN V+ YA G+PLAL+V+GS L G + EEW+SA+ K +++P+ ++Q V
Sbjct: 370 KRKAPDAGYFDISNRVVLYAEGLPLALKVMGSNLFGKTVEEWKSALGKYEKIPNKEVQNV 429

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN- 435
           L+V++D L++ E+ IFLD ACFFKG     +   L AC    K GIS LV +SLV+I   
Sbjct: 430 LRVTFDNLEENEKEIFLDIACFFKGETMEYIEKTLQACGLYPKFGISVLVDRSLVSIDKY 489

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT----------SLPTG 485
           +++ MHDL+Q+MG EIVR+ S  +PGKRSRLW+ ED+++VL+ENT           LP  
Sbjct: 490 DRLRMHDLIQDMGREIVREVSPLEPGKRSRLWYHEDVFEVLSENTGTYRIQGMMVDLPDQ 549

Query: 486 INLDSLKELYLGGCSNLKRF----------PE-ISCNIEDLDLKETAIEELPSSIGNLSR 534
             +  LK+       NLK            P+ +  N+  LD  E     LPSS     +
Sbjct: 550 YTV-HLKDESFKKMRNLKILIVRSGHFFGSPQHLPNNLRLLDWMEYPSSSLPSSF-QPKK 607

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           LV L+L++     ++      L SL  ++L+ C  L KLP +I  + +L  L+L    + 
Sbjct: 608 LVVLNLSHSRF--TMQEPFKYLDSLTSMDLTHCELLTKLP-DITGVPNLTELHLDYCTNL 664

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTL 640
           E++  S+  L KL +LR   C +L+  P    L    S+    C+SL+  
Sbjct: 665 EEVHDSVGFLEKLVELRAYGCTKLKVFPSALRLASLRSLILNWCSSLQNF 714



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 37/206 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
            P+ + L SL+ L L  CS+L+ FP I     N++ + +  T I ELP SIGNL  L +L
Sbjct: 691 FPSALRLASLRSLILNWCSSLQNFPAILGKMDNLKSVSIDSTGIRELPPSIGNLVGLQEL 750

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI----------GNLESLEYLN- 587
            +T+C  LK +      L++L  L++ GC +L     ++          GN++SL   N 
Sbjct: 751 SMTSCLSLKELPDNFDMLQNLINLDIEGCPQLRSFLTKLRDMGQSTLTFGNIQSLNLENC 810

Query: 588 ---------------------LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
                                L++ DF  +P  +++   L  L L NCK+LQ +P  P  
Sbjct: 811 GLIDEDLPIIFHCFPKVSSLVLSKNDFVALPICIQEFPCLELLHLDNCKKLQEIPGFPPN 870

Query: 627 -SSIHARHCTSLKTLSNSSTLLTRSS 651
              ++AR+CTSL T  +S+ LL++ +
Sbjct: 871 IQYVNARNCTSL-TAESSNLLLSQET 895


>gi|9759045|dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1295

 Score =  354 bits (908), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 254/708 (35%), Positives = 373/708 (52%), Gaps = 98/708 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K DVF+SFRG+DVR  FVSHL     R  I+ F DD  L RG  ISP L  AI+GS+ +I
Sbjct: 17  KTDVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISPELIDAIKGSRFAI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------ 115
           V+ S  YA+S WCL+EL+KI+E  NK    +VP+FY VDPSD                  
Sbjct: 77  VVVSRNYAASSWCLDELLKIMEC-NK--DTIVPIFYEVDPSDVRRQRGSFGEDVESHSDK 133

Query: 116 ---AGYCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                +  +L  +       S     +S LI+  V DIS KL      D+K  L+G+ S 
Sbjct: 134 EKVGKWKEALKKLAAISGEDSRNWRDDSKLIKKIVKDISDKLVSTSWDDSKG-LIGMSSH 192

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD------ 221
           +  ++S +     +   +GIWG+GG+GKTTIA  +Y+ +S  F+   FM+N+++      
Sbjct: 193 MDFLQSMISIVDKDVRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVHCFMENVKEVCNRYG 252

Query: 222 --------------ESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
                         E +K    +    N  + R     V IV  D+   +Q++ L+    
Sbjct: 253 VRRLQVEFLCRMFQERDKEAWSSVSCCNIIKERFRHKMVFIVLDDVDRSEQLNELVKETG 312

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA-GFL 326
            F PGSR+I+TTRD  LL +H    +  V++VK L   ++L LF   AF +      GF 
Sbjct: 313 WFGPGSRIIVTTRDRHLLLSH---GINLVYKVKCLPKKEALQLFCNYAFREEIILPHGFE 369

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
           ELS   + YA+G+PLAL+VLGS+L   S+ EWES + +LK  PH DI +VL+VSYDGLD+
Sbjct: 370 ELSVQAVNYASGLPLALRVLGSFLYRRSQIEWESTLARLKTYPHSDIMEVLRVSYDGLDE 429

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQE 446
           +E+ IFL  +CF+       V   LD C ++A+IGI+ L  KSL+  SN  + +HDLL++
Sbjct: 430 QEKAIFLYISCFYNMKQVDYVRKLLDLCGYAAEIGITILTEKSLIVESNGCVKIHDLLEQ 489

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI--NLDSLKELY-----LG 497
           MG E+VRQ+++ +P +R  LW PEDI  +L+EN  T L  GI  NL  + E++       
Sbjct: 490 MGRELVRQQAVNNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEISEVFASDRAFE 549

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR----------------------- 534
           G SNLK       N  DL         LP+ +  L R                       
Sbjct: 550 GLSNLKLL-----NFYDLSFDGETRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFFPEF 604

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           LV+L ++N S L+ +   +  L++L++++LS C  L ++P ++    +LE LNL+  +  
Sbjct: 605 LVELCMSN-SNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYCQSL 662

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLK 638
            ++  S+K L  LS   L NC +L+ +P    L    ++    C+SLK
Sbjct: 663 VEVTPSIKNLKGLSCFYLTNCIQLKDIPIGIILKSLETVGMSGCSSLK 710



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 93/161 (57%), Gaps = 21/161 (13%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P GI L SL+ + + GCS+LK FPEIS N   L L  T IEELPSSI  LS LV LD++
Sbjct: 689 IPIGIILKSLETVGMSGCSSLKHFPEISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMS 748

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL------------------ 583
           +C  L+++ S L +L SL+ LNL GC +LE LP+ + NL SL                  
Sbjct: 749 DCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVS 808

Query: 584 ---EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
              E L ++E   E+IP+ +  LS+L  L +   KRL SLP
Sbjct: 809 TSIEVLRISETSIEEIPARICNLSQLRSLDISENKRLASLP 849



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 107/198 (54%), Gaps = 38/198 (19%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFP-----EISCNIEDLDLKETAIEELPSSIGNL- 532
             SLP  I+ L SL++L L GCS L+ FP      +SC +   DL  T+I+ELP +IGNL 
Sbjct: 846  ASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSC-LRWFDLDRTSIKELPENIGNLV 904

Query: 533  -------------------SRLVDLDL--------TNCSGLKSVSSRLCNLKSLRRLNLS 565
                               +RL  L +        T    L S+   L     LR L+LS
Sbjct: 905  ALEVLQASRTVIRRAPWSIARLTRLQVLAIGNSFFTPEGLLHSLCPPLSRFDDLRALSLS 964

Query: 566  GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELP 624
              + + ++P  IGNL +L  L+L+  +FE IP+S+K+L++L+ L L NC+RLQ+LP ELP
Sbjct: 965  N-MNMTEIPNSIGNLWNLLELDLSGNNFEFIPASIKRLTRLNRLNLNNCQRLQALPDELP 1023

Query: 625  CG-SSIHARHCTSLKTLS 641
             G   I+   CTSL ++S
Sbjct: 1024 RGLLYIYIHSCTSLVSIS 1041



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 24/151 (15%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           NL SL+ L + GC N+  FP +S +IE L + ET+IEE+P+ I NLS+L  LD++    L
Sbjct: 786 NLTSLETLEVSGCLNVNEFPRVSTSIEVLRISETSIEEIPARICNLSQLRSLDISENKRL 845

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLE------------------------KLPEEIGNLES 582
            S+   +  L+SL +L LSGC  LE                        +LPE IGNL +
Sbjct: 846 ASLPVSISELRSLEKLKLSGCSVLESFPLEICQTMSCLRWFDLDRTSIKELPENIGNLVA 905

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
           LE L  +     + P S+ +L++L  L + N
Sbjct: 906 LEVLQASRTVIRRAPWSIARLTRLQVLAIGN 936



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 36/208 (17%)

Query: 467 WHPEDIYQVLNENTSLPT---GIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET 520
           + PE + ++   N++L     GI  L +LK++ L  C  L   P++S   N+E+L+L   
Sbjct: 600 FFPEFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPDLSKATNLEELNLSYC 659

Query: 521 -AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC------------ 567
            ++ E+  SI NL  L    LTNC  LK +   +  LKSL  + +SGC            
Sbjct: 660 QSLVEVTPSIKNLKGLSCFYLTNCIQLKDIPIGII-LKSLETVGMSGCSSLKHFPEISWN 718

Query: 568 --------LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
                    K+E+LP  I  L  L  L++++ +    +PS +  L  L  L L  C+RL+
Sbjct: 719 TRRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLE 778

Query: 619 SLPELPCGSSIHARHCTSLKTLSNSSTL 646
           +LP+         ++ TSL+TL  S  L
Sbjct: 779 NLPD-------TLQNLTSLETLEVSGCL 799


>gi|357513781|ref|XP_003627179.1| NBS resistance protein [Medicago truncatula]
 gi|355521201|gb|AET01655.1| NBS resistance protein [Medicago truncatula]
          Length = 1236

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 254/714 (35%), Positives = 378/714 (52%), Gaps = 86/714 (12%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSK 70
           +P  K+DVF+SFRG D R  F SHL A LCR KI T+ID ++ +G+E+   L  AI+ S 
Sbjct: 22  MPMKKYDVFISFRGDDTRAGFTSHLYADLCRSKIYTYIDYRIEKGDEVWVELVKAIKQST 81

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQ---IVVPVFYLVDPSD-----AGYCPSL 122
           I +V+FSE YASS WCLNELV+I+E  NK      +V+PVFY VDPS        Y  +L
Sbjct: 82  IFLVVFSENYASSTWCLNELVEIMECCNKNEDDKVVVIPVFYHVDPSHVRKQTGSYGTAL 141

Query: 123 ---------------GWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSD 156
                           W   +F              +ES +IE     +  KL+  + +D
Sbjct: 142 IKHKKQGKNDDKMMQNWKNALFQAANLSGFHSTTYRTESEMIEAITRAVLGKLNQQYTND 201

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
                +  E+    I+S + S  TE   +G+WG+GG GKTT+A+A++  +S  +EGS F+
Sbjct: 202 LPCNFILDENYWS-IQSLIKSDLTEVQIIGLWGMGGTGKTTLAAAMFQRVSFKYEGSCFL 260

Query: 217 QNIRDESEKVG----------GLANIHLNFER---------RRLSRMKVLIVFYDLTDLK 257
           + + + S++ G           L    L+ +          RRL RMK  IV  D+ + +
Sbjct: 261 EKVTEVSKRHGINYTCNKLLSKLLREDLDIDTSKLIPSMIMRRLKRMKSFIVIDDVHNSE 320

Query: 258 QIDLLIGRLDGFV-PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            +  LIG   G++  GS VI+TTRD  +L +     +  ++EVK+++  +SL LFS NAF
Sbjct: 321 LLQNLIGVGHGWLGSGSTVIVTTRDKHVLIS---GGIEKIYEVKKMNSQNSLQLFSLNAF 377

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           G+  P  G++ELS   + YA G PLAL+VLGS L+  SE EW+ A+ KLK +P+ +I  +
Sbjct: 378 GKVSPKDGYVELSKRAVDYAKGNPLALKVLGSLLRCKSEIEWDCALAKLKEIPNTEIDFI 437

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
            ++SY+ LDD+E++IFLD ACFFKG+++  +   L+ C F A IGIS L+ K+L+++   
Sbjct: 438 FRLSYNELDDKEKDIFLDIACFFKGHERNRITKILNECGFFADIGISNLLDKALISVDFE 497

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN------TSLPTGINLD 489
           N I MHDL+QE G +IVR+ES+K+PG+RSRL  P+++  VL  N      T LP  +   
Sbjct: 498 NCIQMHDLIQETGKQIVREESLKNPGQRSRLCDPKEVCNVLKNNRVRDALTCLPIHMIFI 557

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEEL---PSSIGNLSRLVDLDLTNCSGL 546
              +L     +    F + S N+E + L  T    +   P S   +  L  L   +  G+
Sbjct: 558 YKMQLPTEILTLRFTFLQGSENVESIFLDATEFTHINLRPESFEKMVNLRLLAFQDNKGI 617

Query: 547 KSVSSRLCNL--------KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           KS+     NL        ++LR     G   L+ LP      E L  L+L     EK+ +
Sbjct: 618 KSI-----NLPHGLDLLPENLRYFQWDG-YPLQSLPSTFCP-EMLVELSLKGSHVEKLWN 670

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL---PCGSSIHARHCTSLKTLSNSSTLLTR 649
            +  L  L  L L   K+L   P +   P    +  R+C S+  + +S  LL +
Sbjct: 671 GVLDLPNLEILDLGGSKKLIECPNVSGSPNLKHVILRYCESMPEVDSSIFLLQK 724



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 5/140 (3%)

Query: 486 INLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTN 542
           ++L +L+ L LGG   L   P +S   N++ + L+   ++ E+ SSI  L +L  L++  
Sbjct: 673 LDLPNLEILDLGGSKKLIECPNVSGSPNLKHVILRYCESMPEVDSSIFLLQKLEVLNVFE 732

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C+ LKS+SS  C+  +LR+L    C+ L++      +++ L+ L L+E D  ++PSS+  
Sbjct: 733 CTSLKSLSSNTCS-PALRKLEARDCINLKEFSVTFSSVDGLD-LCLSEWDRNELPSSILH 790

Query: 603 LSKLSDLRLQNCKRLQSLPE 622
              L          L  LPE
Sbjct: 791 KQNLKRFVFPISDCLVDLPE 810


>gi|47681363|gb|AAT37497.1| N-like protein [Nicotiana tabacum]
          Length = 941

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 249/707 (35%), Positives = 377/707 (53%), Gaps = 93/707 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F SHL   L    I+TF D+K L  G  I   L  AIE S+ +IV
Sbjct: 12  YDVFLSFRGEDTRKTFTSHLYEVLKDRGIKTFQDEKRLEYGATIPEELCKAIEESQFAIV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           +FSE YA+SRWCLNELVKI+E K ++ Q ++P+FY VDPS                +  Y
Sbjct: 72  VFSENYATSRWCLNELVKIMECKTQFRQTIIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131

Query: 119 CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ---------------LVG 163
              +  +  +    + +  ++G+ ++  K  +D       DQ               +VG
Sbjct: 132 KDDVEGIQRWRTALNAAANLKGSCDNRDKTDADCI-RQIVDQISSKLSKISLSYLQNIVG 190

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI------SSHFEGSYFMQ 217
           +++ ++EIES L  G  +   VGIWG+GG+GKTTIA A++  +      S  F+G+ F++
Sbjct: 191 IDTHLEEIESLLGIGINDVRIVGIWGMGGVGKTTIARAMFDTLLGRRDSSYQFDGACFLK 250

Query: 218 NIRDESEKVGGLANIHL--------NFERR---------RLSRMKVLIVFYDLTDLKQ-I 259
           +I++    +  L N  L        N+            RL   KVLIV  D+ D    +
Sbjct: 251 DIKENKRGMHSLQNTLLFELLRENANYNNEDDGKHQMASRLRSKKVLIVLDDIDDKDHYL 310

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G LD F  GSR+I+TTRD  L+      +   ++EV  L  ++++ LF ++AF + 
Sbjct: 311 EYLAGDLDWFGNGSRIIVTTRDKHLI-----GKNDIIYEVTALPDHEAIQLFYQHAFKKE 365

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P   F ELS  V+ +A G+PLAL+V GS L       W+SA+ ++K  P+  I + LK+
Sbjct: 366 VPDECFKELSLEVVNHAKGLPLALKVWGSSLHKRDITVWKSAIEQMKINPNSKIVEKLKI 425

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKI 438
           SYDGL+  +Q +FLD ACFF+G  +  +M  L +C F A+ G+  L+ KSLV IS  N++
Sbjct: 426 SYDGLESMQQEMFLDIACFFRGRQKDYIMQVLKSCHFGAEYGLDVLIEKSLVFISEYNQV 485

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----------GINL 488
            MHDL+Q+MG  IV  +  KDPG+RSRLW  ED+ +V+N N    +          G+  
Sbjct: 486 EMHDLIQDMGKYIVNFK--KDPGERSRLWLAEDVEEVMNNNAGTMSVEVIWVHYDFGLYF 543

Query: 489 --DSLKEL----------YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLV 536
             D++K +          YL   S+      +  N+    L +   E LPS+  +L  LV
Sbjct: 544 SNDAMKNMKRLRILHIKGYLSSTSHDGSIEYLPSNLRWFVLDDYPWESLPSTF-DLKMLV 602

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN-LAEKDFEK 595
            L+L+  S L  + +   +L SLRR++LS   +L + P+  G + +LEYLN L  ++ E+
Sbjct: 603 HLELSR-SSLHYLWTETKHLPSLRRIDLSSSRRLRRTPDFTG-MPNLEYLNMLYCRNLEE 660

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
           +  S++  SKL  L L NCK L+  P +   S   +   +C+SL+  
Sbjct: 661 VHHSLRCCSKLIRLNLNNCKSLKRFPCVNVESLEYLSLEYCSSLEKF 707



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 81/125 (64%), Gaps = 4/125 (3%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNL-SRLVDLDLT 541
           +N++SL+ L L  CS+L++FPEI   ++    + ++ + I ELPSSI    + +  LDL 
Sbjct: 688 VNVESLEYLSLEYCSSLEKFPEIHGRMKPEIQIHMQGSGIRELPSSITQYQTHITKLDLR 747

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               L ++ S +C LKSL  L++SGC KLE LPEE+G+LE+LE L+ +     + PSS+ 
Sbjct: 748 GMEKLVALPSSICRLKSLVSLSVSGCFKLESLPEEVGDLENLEELDASCTLISRPPSSII 807

Query: 602 QLSKL 606
           +LSKL
Sbjct: 808 RLSKL 812



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 7/151 (4%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRL 535
            +LP+ I  L SL  L + GC  L+  PE      N+E+LD   T I   PSSI  LS+L
Sbjct: 753 VALPSSICRLKSLVSLSVSGCFKLESLPEEVGDLENLEELDASCTLISRPPSSIIRLSKL 812

Query: 536 VDLDLTNCSGLK--SVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKD 592
              D  +        +   +   +SL  L+L  C  ++  LPE++G+L SL+ L L+  +
Sbjct: 813 KIFDFGSSKDRVHFELPPVVEGFRSLETLSLRNCNLIDGGLPEDMGSLSSLKKLYLSGNN 872

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           FE +P S+ QL  L  L L+NCKRL  LPE 
Sbjct: 873 FEHLPRSIAQLGALRILELRNCKRLTQLPEF 903


>gi|255579570|ref|XP_002530627.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223529837|gb|EEF31770.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1116

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 264/693 (38%), Positives = 368/693 (53%), Gaps = 113/693 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+SS+     P  K+DVF+SFRG+D R NF SHL AAL ++ I  F DD+ L RG  IS
Sbjct: 1   MANSSN-----PSWKYDVFISFRGEDTRKNFTSHLYAALRQKGINAFKDDRQLERGKTIS 55

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
             L  AI  SKI ++IFS  YA SRWCL E V+I E     GQ+VVPVFY V+P+     
Sbjct: 56  QELVKAIRASKILMIIFSRNYAFSRWCLEEAVEIAECAKGNGQMVVPVFYNVNPNEVRKQ 115

Query: 115 --DAGYC----------------------PSLGWMGIFDIPT-SESVLIEGNVNDISKKL 149
             D G                          LG +  +D+   +ES LIE  + D+  KL
Sbjct: 116 TGDFGKAFGEHQLRFRNNLLTVQRWRLALTQLGSLSGWDLQERTESELIEEIIKDVLGKL 175

Query: 150 --SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTV---GIWGIGGIGKTTIASAIYS 204
             S L      D  VG+ S + E+   L  G    N V   GI G+GGIGKTTIA  +Y 
Sbjct: 176 RKSSLMSGAAMD-FVGMNSRLVEMSMYLDMG--RLNDVLFIGISGMGGIGKTTIARVVYE 232

Query: 205 NISSHFEGSYFMQNIRDESEKVG------------------GLANIHLNFER--RRLSRM 244
            ++S FEGS F+ N+R+  EK G                   + + H        R+ + 
Sbjct: 233 ELASQFEGSSFLANVREVKEKHGLVPLQQQLLSEILMDGNIAIWDAHCGTSEIVNRMCKK 292

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           +VL++  D+  L+Q+ LL GR D F  GSR+IITTRD  LLK H    V  +++V+ LS 
Sbjct: 293 RVLLILDDVNQLEQLKLLAGRHDWFGSGSRIIITTRDEHLLKCHG---VDKIYKVQGLSQ 349

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           ++S+ LF   AF  ++PA  ++ELSN  + Y NG+PLAL VLGS+L   S  EW SA+ +
Sbjct: 350 DESIHLFCLRAFKSDYPADDYVELSNEFVNYCNGLPLALDVLGSFLFDKSVNEWTSALRR 409

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK++P+ +I + L +S+DGL++ E+ IFLD ACFF G D+  V+  L++  F   +GI  
Sbjct: 410 LKQIPNQEILEKLFISFDGLEEVEKKIFLDIACFFNGEDKDYVIKVLESRGFYPHVGIRD 469

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT 484
           L+ KSL+TIS  +I MHDLLQEMG EIVRQES ++PGKRSRLW  ED+Y VL+ +T    
Sbjct: 470 LINKSLITISKERIWMHDLLQEMGREIVRQESQEEPGKRSRLWLYEDVYHVLSNDTGTEQ 529

Query: 485 --GINLDSL----KELYLGGCSNLKR--------------FPEISCNIEDLDLKETAIEE 524
              I LDS     +EL     + +KR                 +S  +  L+      + 
Sbjct: 530 VEAIVLDSCEQEDEELSAKAFTKMKRLRFLKLRNLHLSEGLEYLSNKLRYLEWDRYPFKS 589

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            PS+    + L++L +  CS +K +   +  LK L+ ++LS  + L K            
Sbjct: 590 FPSTF-QPNELIELHM-RCSNIKHMWKGIKPLKMLKVIDLSYSVNLIK------------ 635

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
                  DF+ +P+       L +L L+ C RL
Sbjct: 636 -----TMDFKDVPN-------LEELNLEGCTRL 656



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 95/188 (50%), Gaps = 31/188 (16%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT----- 541
           ++ +L+EL L GC+   R  E+  +I  L   E A  +LPS+     +L D  L      
Sbjct: 641 DVPNLEELNLEGCT---RLLEVHQSIGVLREWEIAPRQLPST-----KLWDFLLPWQKFP 692

Query: 542 -------NCSGLKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDF 593
                  N + +      L +LKSLR LNLS C L    LP ++     L+  NL+  +F
Sbjct: 693 QRFLTQKNPNPMAMALPALFSLKSLRSLNLSYCNLTDGALPSDLSCFPLLKTFNLSGNNF 752

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI---HARHCTSLKTLSNSSTLLTRS 650
             IPSS+ +LSKL D +  NCKRLQS P LP  SSI       C++L+TL     L   +
Sbjct: 753 VSIPSSISRLSKLEDFQFSNCKRLQSFPNLP--SSILFLSMEGCSALETL-----LPKSN 805

Query: 651 SKHWDIFN 658
           S  +++FN
Sbjct: 806 SSQFELFN 813



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 75/190 (39%), Gaps = 41/190 (21%)

Query: 481 SLPTGINLDSLKELYLGGC--------SNLKRFPEISCNIEDLDLKETAIEELPSSIGNL 532
           +LP   +L SL+ L L  C        S+L  FP +    +  +L       +PSSI  L
Sbjct: 707 ALPALFSLKSLRSLNLSYCNLTDGALPSDLSCFPLL----KTFNLSGNNFVSIPSSISRL 762

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNL-KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
           S+L D   +NC  L+S      NL  S+  L++ GC  LE L                  
Sbjct: 763 SKLEDFQFSNCKRLQSFP----NLPSSILFLSMEGCSALETL------------------ 800

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSS 651
               +P S     +L ++  + CKRLQ LP+L   SSI         +   S  L    S
Sbjct: 801 ----LPKSNSSQFELFNICAEGCKRLQLLPDL--SSSILKISVEGFSSKETSPNLFVTHS 854

Query: 652 KHWDIFNFSN 661
               +  F N
Sbjct: 855 SKPSMLTFIN 864


>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 245/683 (35%), Positives = 357/683 (52%), Gaps = 92/683 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K DVF+SFRG+DVR  FVSHL   L R  I  F DD  L RG  IS  L   I GS+ ++
Sbjct: 26  KTDVFVSFRGEDVRKTFVSHLFCELDRMGINAFRDDLDLERGKHISSELVDTIRGSRFAV 85

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQ-IVVPVFYLVDPSDA---------------- 116
           V+ S  YASS WCL+EL++I+E KN   Q  ++PVFY VDPSD                 
Sbjct: 86  VVVSRNYASSSWCLDELLEIMERKNTVDQKTIIPVFYEVDPSDVRRQTGSFGEGVESHSD 145

Query: 117 -----GYCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 +  +L  +       S     ES LI+  V DIS +L      D+ D+L+G+ S
Sbjct: 146 KKKVMKWREALTQLAAISGEDSRNWRDESKLIKKIVKDISDRLVST-SLDDTDELIGMSS 204

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            +  ++S +     +  TVGIWG+GG+GKTTIA  +Y+ +SS F+   FM+N+++   + 
Sbjct: 205 HMDFLQSMMSIEEQDVRTVGIWGMGGVGKTTIAKYLYNKLSSRFQAHCFMENVKEVCNRY 264

Query: 227 G-----GLANIHLNFER----------RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVP 271
           G     G     +  ER           R  R +VLIV  D+   +Q+D L+     F P
Sbjct: 265 GVERLQGEFLCRMFRERDSVSCSSMIKERFRRKRVLIVLDDVDRSEQLDGLVKETGWFGP 324

Query: 272 GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNI 331
           GSR+I+TTRD  LL +H    +  +++VK L   ++L LF   AF     A  F  L+  
Sbjct: 325 GSRIIVTTRDRHLLVSH---GIELIYKVKCLPEKEALHLFCNYAFRNETIAPEFRVLAVQ 381

Query: 332 VIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNI 391
            + YA G+PLAL+VLGS+L    E EWES + +L+  PH DI +VL+VSYDGLD++E+ I
Sbjct: 382 AVNYAFGLPLALRVLGSFLYRRGEREWESTLARLETSPHSDIMEVLRVSYDGLDEQEKAI 441

Query: 392 FLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEI 451
           FL  +CF+           LD C ++A+IGI+ L  KSL+ ISN  I MHDL+++MG E+
Sbjct: 442 FLYISCFYNMKHVDYATRLLDICGYAAEIGITVLTEKSLIVISNGCIKMHDLVEQMGREL 501

Query: 452 VRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELY-----LGGCSNL 502
           VR+++     +R  LW PEDI  +L+E T         +N+  + E+        G SNL
Sbjct: 502 VRRQA-----ERFLLWRPEDICDLLSETTGTSVVEGMSLNMSEVSEVLASDQGFEGLSNL 556

Query: 503 KRFPEISCNIEDLDLKETAIEELPSSIGNLSR-----------------------LVDLD 539
           K       N  DL         LP+ +  L R                       LV+L 
Sbjct: 557 KLL-----NFYDLSYDGETRVHLPNGLTYLPRKLRYLRWDGYPLNSLPSRFHPEFLVELF 611

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
           ++N S L  + + +  L+ L++++LS C  L ++P ++    +LE LNL+  +   ++  
Sbjct: 612 MSN-SHLHYLWNGIQPLRKLKKMDLSRCKYLIEIP-DLSKATNLEELNLSYCQSLTEVTP 669

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+K L KL    L NC +L+ +P
Sbjct: 670 SIKNLQKLYCFYLTNCTKLKKIP 692



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 94/162 (58%), Gaps = 22/162 (13%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS-IGNLSRLVDLDL 540
           +P+GI L SL+ + + GCS+L  FPE S N   L L  T IEELPSS I  LS LV+LD+
Sbjct: 691 IPSGIALKSLETVGMNGCSSLMHFPEFSWNARRLYLSSTKIEELPSSMISRLSCLVELDM 750

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL-------------------- 580
           ++C  ++++ S + +L SL+ L+L+GC  LE LP+ + +L                    
Sbjct: 751 SDCQSIRTLPSSVKHLVSLKSLSLNGCKHLENLPDSLLSLTCLETLEVSGCLNINEFPRL 810

Query: 581 -ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +++E L ++E    ++P+ +  LS+L  L +   ++L+SLP
Sbjct: 811 AKNIEVLRISETSINEVPARICDLSQLRSLDISGNEKLKSLP 852



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 104/195 (53%), Gaps = 35/195 (17%)

Query: 481  SLPTGIN-LDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETAIEELPSSIGNL--- 532
            SLP  I+ L SL++L L GC  L+  P   C     +  LDL+ T+I+ELP +IGNL   
Sbjct: 850  SLPVSISELRSLEKLKLSGCCVLESLPPEICQTMSCLRWLDLERTSIKELPENIGNLIAL 909

Query: 533  --------------------SRLVDLDLTNC----SGLKSVSSRLCNLKSLRRLNLSGCL 568
                                 RL  L + N      GL S+   L     LR L LS  +
Sbjct: 910  EVLQAGRTAIRRAPLSIARLERLQVLAIGNSFYTSQGLHSLCPHLSIFNDLRALCLSN-M 968

Query: 569  KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELPCG- 626
             + ++P  IGNL SL  L+L+  +FE IP+S+++L++LS L + NC+RLQ+LP +LP   
Sbjct: 969  NMIEIPNSIGNLWSLSELDLSGNNFEHIPASIRRLTRLSRLDVNNCQRLQALPDDLPRRL 1028

Query: 627  SSIHARHCTSLKTLS 641
              I+A  CTSL ++S
Sbjct: 1029 LYIYAHGCTSLVSIS 1043



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 10/156 (6%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           ++L  L+ L + GC N+  FP ++ NIE L + ET+I E+P+ I +LS+L  LD++    
Sbjct: 788 LSLTCLETLEVSGCLNINEFPRLAKNIEVLRISETSINEVPARICDLSQLRSLDISGNEK 847

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI-GNLESLEYLNLAEKDFEKIPSSMKQLS 604
           LKS+   +  L+SL +L LSGC  LE LP EI   +  L +L+L     +++P ++  L 
Sbjct: 848 LKSLPVSISELRSLEKLKLSGCCVLESLPPEICQTMSCLRWLDLERTSIKELPENIGNLI 907

Query: 605 KLSDLRLQ---------NCKRLQSLPELPCGSSIHA 631
            L  L+           +  RL+ L  L  G+S + 
Sbjct: 908 ALEVLQAGRTAIRRAPLSIARLERLQVLAIGNSFYT 943



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 34/204 (16%)

Query: 467 WHPEDIYQVLNENTSLP---TGIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE- 519
           +HPE + ++   N+ L     GI  L  LK++ L  C  L   P++S   N+E+L+L   
Sbjct: 602 FHPEFLVELFMSNSHLHYLWNGIQPLRKLKKMDLSRCKYLIEIPDLSKATNLEELNLSYC 661

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC------------ 567
            ++ E+  SI NL +L    LTNC+ LK + S +  LKSL  + ++GC            
Sbjct: 662 QSLTEVTPSIKNLQKLYCFYLTNCTKLKKIPSGIA-LKSLETVGMNGCSSLMHFPEFSWN 720

Query: 568 --------LKLEKLPEE-IGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
                    K+E+LP   I  L  L  L++++ +    +PSS+K L  L  L L  CK L
Sbjct: 721 ARRLYLSSTKIEELPSSMISRLSCLVELDMSDCQSIRTLPSSVKHLVSLKSLSLNGCKHL 780

Query: 618 QSLPE----LPCGSSIHARHCTSL 637
           ++LP+    L C  ++    C ++
Sbjct: 781 ENLPDSLLSLTCLETLEVSGCLNI 804


>gi|357439719|ref|XP_003590137.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355479185|gb|AES60388.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 859

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 251/669 (37%), Positives = 362/669 (54%), Gaps = 67/669 (10%)

Query: 11  IPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGS 69
           +  PK +DVFLSFRG D    FVSHL+++L    I  F  D++ +G++IS SL  AI  S
Sbjct: 1   MSQPKVYDVFLSFRGDDGSAKFVSHLHSSLQNAGISVFRGDEIQQGDDISISLLRAIRHS 60

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG--- 126
           +ISIV+ S  YA+SRWC+ EL KI+E     G +VVPV Y VDPS+  +    G  G   
Sbjct: 61  RISIVVLSINYANSRWCMFELEKIMEIGRTGGLVVVPVLYEVDPSEVRHQE--GQFGKAL 118

Query: 127 ---IFDIPTSESV-------LIE----------------GNVNDISKKLSDLFPSDNKDQ 160
              I +I   ES        LI+                 ++ +I + ++ L   D  D 
Sbjct: 119 EDLILEISVDESTKSNWRRDLIDIGGKDGFIVTDSRNESADIKNIVEHVTRLL--DKTDL 176

Query: 161 LV-----GVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
            V     GV S ++++ + L +  S +   +GIWG+GG+GKTT+A AIY+ I   FEG  
Sbjct: 177 FVVEYPVGVRSRVEDVTNLLNIQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRS 236

Query: 215 FMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSR 274
           F+ NIR+  E      ++  N  + RL++ +VL+V  D+  L Q+  L G    F PGSR
Sbjct: 237 FLLNIREVWETDTNQVSLQENLLKERLAQKRVLLVLDDVNKLDQLKALCGSRKWFGPGSR 296

Query: 275 VIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIK 334
           VIITTRD++LL   R  RV  V+ V E+   +SL LF  +AF Q  P  GF   S  VI 
Sbjct: 297 VIITTRDMRLL---RSCRVDLVYTVVEMDERESLELFCWHAFKQPCPPEGFATHSRDVIV 353

Query: 335 YANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD-EEQNIFL 393
           Y+ G+PLALQVLGSYL G    EW+  + KLK +PH  +QK LKVS+DGL D  E+ IF 
Sbjct: 354 YSGGLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQVQKKLKVSFDGLKDVTEKQIFF 413

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIV 452
           D ACFF G D+  ++  L+ C +   IGI  LV +SLVT+   NK+ MHDLL++MG +IV
Sbjct: 414 DIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVTVDIGNKLRMHDLLRDMGRQIV 473

Query: 453 RQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD----------------SLKEL 494
            +ES   P  RSRLW  E+++ +L  ++ T    G+ L+                 L+ L
Sbjct: 474 YEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALEFPREVCLETKSFKKMNKLRLL 533

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC 554
            L G      F  +S +++ L         +P+    L  LV ++L   S LK + ++  
Sbjct: 534 RLAGVKLKGDFKYLSGDLKWLYWHGFPETYVPAEF-QLGSLVVMEL-KYSKLKQIWNKSQ 591

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQN 613
            L++L+ LNLS  L L + P +   + +LE L L +      +  S+  L K+  + L +
Sbjct: 592 MLENLKVLNLSHSLDLTETP-DFSYMPNLEKLILEDCPSLSTVSHSIGSLHKILLINLTD 650

Query: 614 CKRLQSLPE 622
           C  L++LP+
Sbjct: 651 CTGLRTLPK 659



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 4/120 (3%)

Query: 1   MASSSSSINMIPH--PK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGN 56
           + +  ++I  +P   PK +DVFLSFRG+D R  F+SHL+++L    I  F DD  + RG+
Sbjct: 693 LIADKTAIPEVPSSLPKMYDVFLSFRGEDNRPRFISHLHSSLHSAGIYAFKDDDGIQRGD 752

Query: 57  EISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           +IS SL  AIE S+ISIV+ S  YA+SRWC+ EL KI+E     G++VVPVFY VDPS+ 
Sbjct: 753 QISVSLGKAIEQSRISIVVLSTNYANSRWCMLELEKIMEVGRMNGRVVVPVFYDVDPSEV 812



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 73/119 (61%), Gaps = 4/119 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L++LK L L    +L   P+ S   N+E L L++  ++  +  SIG+L +++ ++LT+C+
Sbjct: 593 LENLKVLNLSHSLDLTETPDFSYMPNLEKLILEDCPSLSTVSHSIGSLHKILLINLTDCT 652

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           GL+++   +  LKSL  L LSGC  L+KL E++  +ESL  L   +    ++PSS+ ++
Sbjct: 653 GLRTLPKSIYKLKSLATLILSGCSMLDKL-EDLEQMESLTTLIADKTAIPEVPSSLPKM 710


>gi|359493351|ref|XP_002277841.2| PREDICTED: uncharacterized protein LOC100251634 [Vitis vinifera]
          Length = 2816

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 230/545 (42%), Positives = 313/545 (57%), Gaps = 61/545 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MASSSSS       + DVFLSFRG D R+ F  HLN AL  + I TFIDDK L RG +IS
Sbjct: 1   MASSSSSDR-----EFDVFLSFRGTDTRNTFTGHLNTALKSKGIRTFIDDKELRRGEDIS 55

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GY 118
            +L + IE S+ SIV+ SE YA+S+WCL ELVKILE K    Q VVP+FY VDPSD  G 
Sbjct: 56  STLFTTIEKSRCSIVVLSEAYATSKWCLEELVKILECKRTIKQRVVPIFYHVDPSDVRGQ 115

Query: 119 CPSLG-------------------WMGI---------FDIPT-SESVLIEGNVNDISKKL 149
             S G                   W            +D+   SE+ LI+  V DISK L
Sbjct: 116 GGSFGQAMDAHKKNLKIEEKQLQRWSAALTEVGNLSGWDLGNKSEAQLIQDIVADISKYL 175

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
            +   S++   LVGV+S IKE+ES L   ST+   +GI G+ GIGKT +A +IY   S  
Sbjct: 176 -NCASSNDAQNLVGVDSCIKELESLLCFESTDVRMIGICGMSGIGKTALARSIYEQFSDK 234

Query: 210 FEGSYFMQNIRD-ESEKVGGLA-------------NIHLNFERRRLSRMKVLIVFYDLTD 255
           FEG  F+ N+ + E E                   ++ +   + RL   KVLIV  +++ 
Sbjct: 235 FEGCCFLTNVGNVEREGTDYWKKELLSSVLKDNDIDVTITSIKTRLGSKKVLIVVDNVSH 294

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
              +  LIG+ D F P SR+IITTR+ + L     S +  V+EV++L  + ++ LF+  A
Sbjct: 295 QLTMKTLIGKHDWFGPQSRIIITTRNKRFL-----SGMDAVYEVQKLQDDKAIELFNHCA 349

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F ++HPA  F   S   I YA G+PLAL+VLGS L    ++ W+S +++L++    +I  
Sbjct: 350 FRKDHPAESFKRFSLRFIAYAQGLPLALEVLGSSLYKKDQDYWKSKLDELEKTLDNEIHG 409

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           VL+ S+D L+D E++IFLD ACFFK +++  +M  L++C      GI  L+ + L+TIS 
Sbjct: 410 VLQKSFDELNDNEKDIFLDIACFFKCSNKDHIMKILESCNLFPGSGIENLIDRFLITISC 469

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGI--NLDSL 491
            K+ MHDLLQ+MG +IV Q S K+PGKRSRLW  +DI  VL +NT      GI  NL  L
Sbjct: 470 EKLEMHDLLQKMGWKIVTQTS-KEPGKRSRLWMQDDICHVLEKNTGTKEVKGIFLNLFGL 528

Query: 492 KELYL 496
           KE++ 
Sbjct: 529 KEIHF 533



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 230/656 (35%), Positives = 330/656 (50%), Gaps = 96/656 (14%)

Query: 15   KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
            K+ VFLSFRG+D R+NF SHL  AL ++ IETF+DDK L  G EISP L  AI+ S+ SI
Sbjct: 1404 KYAVFLSFRGEDTRNNFTSHLYKALDQKGIETFMDDKKLRTGEEISPILVGAIQRSRCSI 1463

Query: 74   VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG--------- 123
            ++ SE YASS+WCL ELV+ILE K    Q VVP+FY VDPS       S G         
Sbjct: 1464 IVLSENYASSKWCLEELVEILECKRTKNQRVVPIFYNVDPSHVRNQTGSFGEALSKHEEN 1523

Query: 124  ----------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                      W           G+  +   E++LIE    DISK L+ +  S +   LVG
Sbjct: 1524 LKIKGEKLRKWREALTQVANLSGLHSLNKPEALLIEEICVDISKGLNFVSSSKDTQILVG 1583

Query: 164  VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
            V+S ++E+ES L   S + + +GIWG+GGIGKTT+A AIY  IS  FEGS F+ N+ D +
Sbjct: 1584 VDSSVRELESLLCLESNDVHMIGIWGMGGIGKTTLARAIYEKISDKFEGSCFLANVGDLA 1643

Query: 224  E------------KVGGLANIHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
            +            +V    NI +     + RL   KVLIV  ++     +  L G  + F
Sbjct: 1644 KEGEDYLKDQLLSRVLRDKNIDVTITSLKARLHSKKVLIVLDNVNHQSILKNLAGESNWF 1703

Query: 270  VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
             P SR+IITTRD QLL  H    V  + EV++L  N ++ LF+  AF    P++  +EL 
Sbjct: 1704 GPQSRIIITTRDKQLLTMH---GVKDIHEVQKLQDNKAIELFNHYAFRNEPPSSDVMELI 1760

Query: 330  NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQ 389
            + VI YA G+PLAL+VLGS     S++EW +           DI+ V+ ++  GL    +
Sbjct: 1761 HHVIAYAQGLPLALEVLGSSFCNKSKDEWGTE----------DIE-VIVLNLTGL----K 1805

Query: 390  NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG 449
             I   TA F K     +++  +  C  +     S+L  KS V IS +   +  L  + G 
Sbjct: 1806 EIRFTTAAFAKMTKLRMLI-IISECSANQMQCCSKL-EKSPV-ISQHMPCLRRLCLD-GT 1861

Query: 450  EIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN-LDSLKELYLGGCSNLKRFPEI 508
             I    S      +  L   ++  ++L    SLP+ I+ L  L+ L L GC +L +    
Sbjct: 1862 AITELPSSIAYATQLVLLDLKNCRKLL----SLPSSISKLTLLETLSLSGCLDLGK---- 1913

Query: 509  SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
             C +   +L     + LP ++  L  L  L+L NCSGL S+ +      S+  +N S C 
Sbjct: 1914 -CQVNSGNL-----DALPQTLDRLCSLRRLELQNCSGLPSLPAL---PSSVELINASNCK 1964

Query: 569  KLEKL-PEEI---------GNLESL-EYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
             LE + P+ +         GN   L +Y +  E+D +++ +   Q    S    QN
Sbjct: 1965 SLEDISPQSVFLCFGGSIFGNCFKLSKYPSTMERDLQRMAAHANQERWWSTFEQQN 2020



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 75/101 (74%), Gaps = 1/101 (0%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
            +DVFLSFRG+D R  F +HL  AL R+ + TF DD K+ RG  ISP+L  AIEGS+ SI+
Sbjct: 1218 YDVFLSFRGEDTRFTFAAHLYEALDRKGVNTFFDDHKIRRGESISPTLVRAIEGSRSSII 1277

Query: 75   IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
            I S+ YASS WCL ELVKILE +   GQ+V+PVFY VDPSD
Sbjct: 1278 ILSQNYASSTWCLEELVKILECRKTMGQLVLPVFYNVDPSD 1318



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 100/185 (54%), Gaps = 18/185 (9%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDL 538
            P    L SL+ L L GCSNL++FP+IS +   +  L L  TAI E+P+SI   S LV L
Sbjct: 690 FPAIYKLVSLQTLDLSGCSNLQKFPDISQHMPCLSKLYLDGTAITEIPASIAYASELVLL 749

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-------- 590
           DLTNC  LK + S +  L  LR L LSGC KL K  +  GNL+ L    L+         
Sbjct: 750 DLTNCKELKFLPSSIPKLTLLRILTLSGCSKLGKFQQNSGNLDRLSGKRLSHLGILSSLK 809

Query: 591 ------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNS 643
                   F  +P   K LS LS L L +C+RLQ+LP LP    I +A +CTSL+++   
Sbjct: 810 SLNLSGNRFIHLPCIFKGLSNLSRLDLHDCRRLQTLPLLPPSVRILNASNCTSLESILPE 869

Query: 644 STLLT 648
           S  ++
Sbjct: 870 SVFMS 874



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 81/153 (52%), Gaps = 17/153 (11%)

Query: 499  CSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
            CS L++ P IS +   +  L L  TAI ELPSSI   ++LV LDL NC  L S+ S +  
Sbjct: 1837 CSKLEKSPVISQHMPCLRRLCLDGTAITELPSSIAYATQLVLLDLKNCRKLLSLPSSISK 1896

Query: 556  LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
            L  L  L+LSGCL L K     GNL++L             P ++ +L  L  L LQNC 
Sbjct: 1897 LTLLETLSLSGCLDLGKCQVNSGNLDAL-------------PQTLDRLCSLRRLELQNCS 1943

Query: 616  RLQSLPELPCGSS-IHARHCTSLKTLSNSSTLL 647
             L SLP LP     I+A +C SL+ +S  S  L
Sbjct: 1944 GLPSLPALPSSVELINASNCKSLEDISPQSVFL 1976


>gi|358348505|ref|XP_003638286.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355504221|gb|AES85424.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1074

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 244/676 (36%), Positives = 372/676 (55%), Gaps = 79/676 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R NFV+HLNAAL   +I T+IDD++ +G ++ P L  AIE S+ISIV+
Sbjct: 14  YDVFLSFRGEDTRRNFVAHLNAALSNAEINTYIDDRIQKGTDLEPELFRAIEDSRISIVV 73

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS---------------DAGYCP 120
           FSE Y  S WCL EL +I++ +   GQIV PVFY V+PS                A    
Sbjct: 74  FSENYVHSSWCLKELEQIMKCRVNCGQIVEPVFYHVEPSVLRHQAGDFGKALEETAKRSS 133

Query: 121 SLG-----WMGIFDIPTSESV---------------LIEGNVNDISKKLSDLFPSDNKDQ 160
           S G      +  + I  +E                 LI   V DI +KL +   +  K  
Sbjct: 134 SEGEKMNTVLSTWQIALTEVANISGWDTKNFKDDVELISQIVKDIKRKLKNRLLNITKFP 193

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            VG+++ +++I + + + S++   +GIWG+GG GKTT A+A Y+     F    F++NIR
Sbjct: 194 -VGLDTHVQQIIAFIKNQSSKVCLIGIWGMGGSGKTTTATAFYNQFHGKFVVHRFIENIR 252

Query: 221 DESEKVGGLANIHLNFE---------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVP 271
           +  EK  G  NIHL  +          +R  R K L+V  D++ L+Q++ L G+   F  
Sbjct: 253 EVCEK-EGRGNIHLKQQLLLDNMKTIEKRFMREKALVVLDDVSALEQVNALCGKHKCFGT 311

Query: 272 GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNI 331
           GS +I+T+RDV++LK      V HV+ + E+   +SL LF+ +AF ++     F +LS  
Sbjct: 312 GSVLIVTSRDVRILK---LLEVDHVYSMTEMDEYESLELFNLHAFRKSSAKEDFNQLSRS 368

Query: 332 VIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD-DEEQN 390
           +I Y  G+PLAL+ +GSYL   ++++W+S ++ L+R+P+  +QK LK+SYDGLD D E+ 
Sbjct: 369 IIDYCGGLPLALEEIGSYLFDRTKQQWKSTLSNLRRIPNDKVQKKLKISYDGLDCDSERG 428

Query: 391 IFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGG 449
           IFLD  CFF G  +  V   LD C  +A +GI+ L+ +SL+ +  N+K+ MH LL++MG 
Sbjct: 429 IFLDICCFFIGKKRAYVSEILDGCGLNADMGITILIERSLLKVEKNDKLGMHGLLRDMGR 488

Query: 450 EIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI------------NLDSLKELY 495
           EIV + S ++ GKRSRLW  ED++ VLN+N  T    G+            N DS K++ 
Sbjct: 489 EIVCKRSEEELGKRSRLWSDEDVHDVLNQNCGTKFVEGLVLKSQSTENVSFNADSFKKM- 547

Query: 496 LGGCSNLKRFPEISCNIE-DLDLKETAIEELPSS----IGNLSRLVD-LDLTNCSGLKSV 549
               +NL+       ++  D   +  A+ EL  S    + N ++L++ L + N S  K +
Sbjct: 548 ----NNLRLLQLDHVDLTGDFYQENLAVFELKHSNIKLVWNETKLMNKLKILNLSHSKHL 603

Query: 550 SSR--LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKL 606
           +S      L +L +L +  C  L KL   IG+L+++  LNL +      +P  + QL  L
Sbjct: 604 TSTPDFSKLPNLEKLIMKNCPNLSKLHHSIGDLKNILLLNLKDCTSLASLPEVIYQLKSL 663

Query: 607 SDLRLQNCKRLQSLPE 622
             L    C ++  L E
Sbjct: 664 KTLIFSGCSKIDKLEE 679



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 4/140 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK L L    +L   P+ S   N+E L +K    + +L  SIG+L  ++ L+L +C+
Sbjct: 589 MNKLKILNLSHSKHLTSTPDFSKLPNLEKLIMKNCPNLSKLHHSIGDLKNILLLNLKDCT 648

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L S+   +  LKSL+ L  SGC K++KL E+I  +ESL  L   +   +++P S+  L 
Sbjct: 649 SLASLPEVIYQLKSLKTLIFSGCSKIDKLEEDIVQMESLTTLIAKDTGVKEMPYSILGLK 708

Query: 605 KLSDLRLQNCKRLQSLPELP 624
            ++ + L  C+ L S   LP
Sbjct: 709 GIAYISLCGCEGL-SFEVLP 727


>gi|357469163|ref|XP_003604866.1| NBS resistance protein-like protein [Medicago truncatula]
 gi|355505921|gb|AES87063.1| NBS resistance protein-like protein [Medicago truncatula]
          Length = 1791

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 271/752 (36%), Positives = 382/752 (50%), Gaps = 120/752 (15%)

Query: 2    ASSSSSINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
            A +   I     PK +DVFLSFRG+D R  F+SH+ ++L    I TF DD ++ RG++IS
Sbjct: 511  AMARDIIKKTDQPKLYDVFLSFRGEDSRAKFMSHIFSSLQNAGIHTFRDDDQIQRGDQIS 570

Query: 60   PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC 119
             SL  AI  S+ISI+I S  YA+SRWC+ ELVKI+E     G +V+PVFY VDPS+  + 
Sbjct: 571  VSLLRAIGQSRISIIILSTNYANSRWCMLELVKIMEIGRTRGLVVLPVFYEVDPSEVRHQ 630

Query: 120  PS-----------------------------LGWMGIFDIPTS--ESVLIEGNVNDISKK 148
                                           +G +  F +  S  ES  I+  V  I+  
Sbjct: 631  EGQFGKSFEDLISTISVDESTKSNWKRDLIDIGGIAGFVLKDSRNESADIKNIVEHITHL 690

Query: 149  L--SDLFPSDNKDQLVGVESIIKEIESQLLS--GSTEFNTVGIWGIGGIGKTTIASAIYS 204
            L  ++LF +++    VGV+  + E  ++LL+   S + + +GIWG+GG GKTTIA AIY+
Sbjct: 691  LDRTELFVAEHP---VGVQPRV-EAATKLLNIQYSEDVSLLGIWGMGGTGKTTIAKAIYN 746

Query: 205  NISSHFEGSYFMQNIRDESEKVGGLANIHL---------------------NFERRRLSR 243
             I + FEG  F+ NIR+  E    L ++                       N  + RLS+
Sbjct: 747  QIGNKFEGRSFLLNIREFWETNINLVSLQQQLLCDVYKTTTFKIRDIESGKNTLKERLSQ 806

Query: 244  MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
             +VLIV  D+ +L Q+  L G  + F PGSR+IITTRD+ LL   R  RV  V+ ++E+ 
Sbjct: 807  NRVLIVLDDVNELDQLKALCGSREWFGPGSRIIITTRDMHLL---RSCRVDEVYTIEEMG 863

Query: 304  YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
             ++SL LFS +AF Q  P   F   S  VI Y+  +PLALQVLGSYL      EW+  + 
Sbjct: 864  DSESLELFSWHAFNQPSPTKDFATHSTDVIAYSGRLPLALQVLGSYLSDCEISEWQKMLE 923

Query: 364  KLKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
            KLK +PH  +QK LKVS+DGL D  E+ IFLD ACFF G D+   +  L+   F A IGI
Sbjct: 924  KLKCIPHDQVQKKLKVSFDGLKDVTEKQIFLDIACFFIGMDRNDAIQILNGSGFFADIGI 983

Query: 423  SRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-- 479
              LV +SLVT+ N NK+ MHDLL++MG +IV +ES  DP  RSRLW  E+++ +++++  
Sbjct: 984  KVLVERSLVTVDNRNKLRMHDLLRDMGRQIVYEESPFDPETRSRLWRREEVFDIISKHKG 1043

Query: 480  TSLPTGINLD------------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETA 521
            T    G+ L+                   L+ L L G      F  +S  +  L      
Sbjct: 1044 TEAVKGLALEFPRKNTVSLNTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLYWHGFP 1103

Query: 522  IEELPSSIGNLSRLVDLDLTNCSGLKSV---SSRLCNLK--------------------S 558
                P+     S LV ++L   S LK +   S  L NLK                    +
Sbjct: 1104 STYTPAEFQQGS-LVSIEL-KYSSLKQIWKKSQLLENLKILNLSHSWDLIETPDFSFMPN 1161

Query: 559  LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
            L +L L  C +L  +   IG+L  L  +NL +    +K+P S+ +L  L  L L  C ++
Sbjct: 1162 LEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDCTSLQKLPRSIYKLKSLETLILSGCSKI 1221

Query: 618  QSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
              L E             SLKTL    T +T+
Sbjct: 1222 DKLEE-------DLEQMESLKTLIADKTAITK 1246



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 174/515 (33%), Positives = 260/515 (50%), Gaps = 85/515 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCRE-KIETFIDD-KLNRGNE-ISPSLSSAIEGSKI 71
           +++V+LSF  +D   +F + +  AL R+ +   F DD KL  G+  I  S+ + IE  K+
Sbjct: 15  RYNVYLSFCHQDA-ASFATGIYTALNRKSRFHVFWDDEKLGSGDRGIPTSILNVIEDCKV 73

Query: 72  SIVIFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFY------------------LVD 112
           ++++FS  Y +SR CL E  KI E      G IV+PV Y                   VD
Sbjct: 74  AVIVFSRNYVNSRSCLQEFEKITECCLTTSGLIVLPVLYDGLNHYSSFGTVEETFHDFVD 133

Query: 113 ----------PSD------AGYCPSLGWMGIFDIPTS---ESVL--IEGNVNDISKKLSD 151
                       D      A    +  + G+ D   S   E V+  +E     ++KK  D
Sbjct: 134 RIWIKETTSEEKDKFMSWVAAVTKATTYSGVIDFADSYGREYVVDVVESVTRTVNKK-RD 192

Query: 152 LFPSDNKDQL-VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
           LF +     +  GV+ +I      LL  S     +GIWG+ GIGK+TIA AIY+ I  +F
Sbjct: 193 LFGAFYTASVKSGVQDVI-----HLLKQSRSPLLIGIWGMAGIGKSTIAEAIYNQIGPYF 247

Query: 211 EGSYFMQNIRDESEKVGGLANIH---------------------------LNFERRRLSR 243
           E  Y + ++R+  ++ GGL +                              N  + +L  
Sbjct: 248 EHKYLLDDVREVWKRDGGLVSFDGPVSLQEKLLSYRGIPTEIKIGTIESGKNILKEKLHN 307

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            +VL+V  ++  L+Q+  L G  D F PGS++IITTRD  LLK H   RV H+++VKEL 
Sbjct: 308 KRVLLVLDNVDKLEQLKSLCGNRDWFGPGSKIIITTRDRHLLKEH---RVDHIYKVKELD 364

Query: 304 YNDSLTLFSRNAFGQNHPA-AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
            ++S+ LF+  AF Q   +  GF ELS  ++ Y+ G+PLAL+ LG +L G    EW+  +
Sbjct: 365 ESESIELFNWAAFNQATTSREGFGELSRQLVAYSRGLPLALKALGGFLHGKEVLEWKRVL 424

Query: 363 NKLKR--MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
             L+    P  +I +VL+ S+  L  EE++IFLD ACFF   DQ  V++ L+     + +
Sbjct: 425 RSLETFSFPDQEILQVLETSFADLSGEEKHIFLDIACFFNRMDQNDVLHTLNRSTQCSAL 484

Query: 421 GISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQ 454
            IS L  KSLVTI  NNK+ MH LLQ M  +I+++
Sbjct: 485 LISLLEDKSLVTIDENNKLEMHGLLQAMARDIIKK 519



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 3/127 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
            L++LK L L    +L   P+ S   N+E L LK+   +  +  SIG+L +L+ ++LT+C+
Sbjct: 1136 LENLKILNLSHSWDLIETPDFSFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDCT 1195

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+ +   +  LKSL  L LSGC K++KL E++  +ESL+ L   +    K+P S+ +L 
Sbjct: 1196 SLQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIADKTAITKVPFSIVRLR 1255

Query: 605  KLSDLRL 611
             +  + L
Sbjct: 1256 NIGYISL 1262


>gi|357478613|ref|XP_003609592.1| TIR-NBS-LRR RCT1 resistance protein, partial [Medicago truncatula]
 gi|355510647|gb|AES91789.1| TIR-NBS-LRR RCT1 resistance protein, partial [Medicago truncatula]
          Length = 871

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 269/740 (36%), Positives = 379/740 (51%), Gaps = 120/740 (16%)

Query: 14  PK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKI 71
           PK +DVFLSFRG+D R  F+SH+ ++L    I TF DD ++ RG++IS SL  AI  S+I
Sbjct: 17  PKLYDVFLSFRGEDSRAKFMSHIFSSLQNAGIHTFRDDDQIQRGDQISVSLLRAIGQSRI 76

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY------------- 118
           SI+I S  YA+SRWC+ ELVKI+E     G +V+PVFY VDPS+  +             
Sbjct: 77  SIIILSTNYANSRWCMLELVKIMEIGRTRGLVVLPVFYEVDPSEVRHQEGQFGKSFEDLI 136

Query: 119 ----------------CPSLGWMGIFDIPTS--ESVLIEGNVNDISKKL--SDLFPSDNK 158
                              +G +  F +  S  ES  I+  V  I+  L  ++LF +++ 
Sbjct: 137 STISVDESTKSNWKRDLIDIGGIAGFVLKDSRNESADIKNIVEHITHLLDRTELFVAEHP 196

Query: 159 DQLVGVESIIKEIESQLLS--GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
              VGV+  + E  ++LL+   S + + +GIWG+GG GKTTIA AIY+ I + FEG  F+
Sbjct: 197 ---VGVQPRV-EAATKLLNIQYSEDVSLLGIWGMGGTGKTTIAKAIYNQIGNKFEGRSFL 252

Query: 217 QNIRDESEKVGGLANIHL---------------------NFERRRLSRMKVLIVFYDLTD 255
            NIR+  E    L ++                       N  + RLS+ +VLIV  D+ +
Sbjct: 253 LNIREFWETNINLVSLQQQLLCDVYKTTTFKIRDIESGKNTLKERLSQNRVLIVLDDVNE 312

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L Q+  L G  + F PGSR+IITTRD+ LL   R  RV  V+ ++E+  ++SL LFS +A
Sbjct: 313 LDQLKALCGSREWFGPGSRIIITTRDMHLL---RSCRVDEVYTIEEMGDSESLELFSWHA 369

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F Q  P   F   S  VI Y+  +PLALQVLGSYL      EW+  + KLK +PH  +QK
Sbjct: 370 FNQPSPTKDFATHSTDVIAYSGRLPLALQVLGSYLSDCEISEWQKMLEKLKCIPHDQVQK 429

Query: 376 VLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            LKVS+DGL D  E+ IFLD ACFF G D+   +  L+   F A IGI  LV +SLVT+ 
Sbjct: 430 KLKVSFDGLKDVTEKQIFLDIACFFIGMDRNDAIQILNGSGFFADIGIKVLVERSLVTVD 489

Query: 435 N-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD-- 489
           N NK+ MHDLL++MG +IV +ES  DP  RSRLW  E+++ +++++  T    G+ L+  
Sbjct: 490 NRNKLRMHDLLRDMGRQIVYEESPFDPETRSRLWRREEVFDIISKHKGTEAVKGLALEFP 549

Query: 490 ----------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
                            L+ L L G      F  +S  +  L          P+     S
Sbjct: 550 RKNTVSLNTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLYWHGFPSTYTPAEFQQGS 609

Query: 534 RLVDLDLTNCSGLKSV---SSRLCNLK--------------------SLRRLNLSGCLKL 570
            LV ++L   S LK +   S  L NLK                    +L +L L  C +L
Sbjct: 610 -LVSIEL-KYSSLKQIWKKSQLLENLKILNLSHSWDLIETPDFSFMPNLEKLVLKDCPRL 667

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
             +   IG+L  L  +NL +    +K+P S+ +L  L  L L  C ++  L E       
Sbjct: 668 TAVSRSIGSLHKLLLINLTDCTSLQKLPRSIYKLKSLETLILSGCSKIDKLEE------- 720

Query: 630 HARHCTSLKTLSNSSTLLTR 649
                 SLKTL    T +T+
Sbjct: 721 DLEQMESLKTLIADKTAITK 740



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 3/127 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L++LK L L    +L   P+ S   N+E L LK+   +  +  SIG+L +L+ ++LT+C+
Sbjct: 630 LENLKILNLSHSWDLIETPDFSFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDCT 689

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ +   +  LKSL  L LSGC K++KL E++  +ESL+ L   +    K+P S+ +L 
Sbjct: 690 SLQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIADKTAITKVPFSIVRLR 749

Query: 605 KLSDLRL 611
            +  + L
Sbjct: 750 NIGYISL 756


>gi|357513283|ref|XP_003626930.1| TMV resistance protein N [Medicago truncatula]
 gi|355520952|gb|AET01406.1| TMV resistance protein N [Medicago truncatula]
          Length = 1091

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 216/541 (39%), Positives = 303/541 (56%), Gaps = 81/541 (14%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSK 70
           P   HDVF++FRG+DVR  FVSHL A L    I TF+D +KL +G +I   L  AI  S+
Sbjct: 12  PQYLHDVFINFRGEDVRRTFVSHLYAVLSNAGINTFLDNEKLEKGEDIGHELLQAISVSR 71

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAGYCPSL- 122
           ISI++FS+ Y  S WCLNEL KI+E +  +G +V+PVFY VDPS       D G    + 
Sbjct: 72  ISIIVFSKNYTESSWCLNELEKIMECRRLHGHVVLPVFYDVDPSVVRHQKGDFGKALEVA 131

Query: 123 -----------------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDL- 152
                                        GW G      S+  L++  V  I  KL +  
Sbjct: 132 AKSRYIIEEVMVKELGKWRKVLTEASNLSGWDG--SAFRSDRELVKKIVEAILPKLDNTT 189

Query: 153 -----FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
                FP       VG+ES +K++   +   S +   VGIWG+GG GKTT+A AIY+ I 
Sbjct: 190 LSITEFP-------VGLESHVKQVVGVIEKHSGDVCMVGIWGMGGSGKTTVAKAIYNEIH 242

Query: 208 SHFEGSYFMQNIRDESEKVGGLANIHLNFE----------------------RRRLSRMK 245
             F+ + F++NIR+  EK     +IHL  +                      +R L+  K
Sbjct: 243 RRFDCTSFIENIREVCEK-DTKGHIHLQQQLLSDVLKTKEKIHSIASGTATIQRELTGKK 301

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
            L++  D+TD +QI  L G    F  GS +I+TTRDV +LK      V  V++++E+  N
Sbjct: 302 ALVILDDVTDFQQIKALCGNHKFFGAGSVLIVTTRDVHILKL---LNVDSVYKMEEMQKN 358

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           +SL LFS +AF +  P  GF ELS  V  Y  G+PLAL+VLGSYL   +++EW S ++KL
Sbjct: 359 ESLELFSWHAFRKASPRGGFSELSRNVAAYCGGLPLALEVLGSYLFERTKQEWISVLSKL 418

Query: 366 KRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           +R+P+  + + L++SYDGL DD  ++IFLD  CFF G D+  V   L+ C   A IGI+ 
Sbjct: 419 ERIPNDQVHEKLRISYDGLKDDMVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAV 478

Query: 425 LVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP 483
           L+ +SL+ +  NNK+ MHDL+++MG EIVR+ S ++PGKRSRLW  ED++ VL +NT   
Sbjct: 479 LIDRSLLKVEKNNKLGMHDLIRDMGREIVRESSAREPGKRSRLWFHEDVHDVLAKNTGTE 538

Query: 484 T 484
           T
Sbjct: 539 T 539



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 73/127 (57%), Gaps = 3/127 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L L    +LKR P+ S   N+E L +K+  ++ ++  SIG+L  L+ ++L +C+
Sbjct: 629 LHKLKILNLSHSKHLKRTPDFSKLPNLEKLIMKDCQSLSDIHPSIGDLKNLLLINLKDCA 688

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L ++   +  L+S++ L LSGC K+ KL E+I  ++SL  L       +++P S+ +  
Sbjct: 689 SLVNLPREIYRLRSVKTLILSGCSKIVKLEEDIVQMKSLTTLIAENAGVKQVPFSIVRSK 748

Query: 605 KLSDLRL 611
            ++ + L
Sbjct: 749 NITHISL 755


>gi|359486980|ref|XP_003633500.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 852

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 259/743 (34%), Positives = 380/743 (51%), Gaps = 108/743 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VFLSFRG+D R+ F  HL  AL    I TF DD+ L RG  I+  L  AIE SKI ++
Sbjct: 25  YEVFLSFRGEDTRYGFTDHLYEALISCGIRTFRDDEELARGGIIASELLEAIEESKIFVI 84

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           IFSE YA+SRWCL+ELVKI E     G+ ++P+FY VDPS                    
Sbjct: 85  IFSENYAASRWCLDELVKISECGATEGRRILPIFYHVDPSHVRKQRGSYEKAFVDHEKEA 144

Query: 117 ------------GYCPSLGWMGIFDIP--TSESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                            +G +  +D+     E+ LI+  ++ I K+L+          +V
Sbjct: 145 DEEKREKIQKWRSALAKVGNLAGYDLQKYQYEARLIKEIIDVILKELNSKLLLHVSKNIV 204

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G+   +++++S +   S +   +GI+G+GGIGKTTIA  +Y+NIS  FE   F++N+R+ 
Sbjct: 205 GMNFHLEKLKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVRER 264

Query: 223 SEKVGGL-------------------ANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           S+    L                   +N+H  +N  R R    KVL++  D+ +LKQ+  
Sbjct: 265 SKDYSSLLQLQKELLNGVMKGKNKKISNVHEGINVIRNRFHSKKVLLILDDVDNLKQLQF 324

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G    F P SR+IIT+RD   L  H    V   ++V+ LSY +S+ LF ++AF QN P
Sbjct: 325 LAGEHSWFGPRSRIIITSRDQHCLNVHG---VDASYKVEALSYKESIQLFCQHAFKQNIP 381

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
            + ++ LS+ V+ Y  G+PLAL+VLGS+L   S  EWESA+ KLK  P++++Q VLK+S+
Sbjct: 382 KSDYVNLSDHVVNYVKGLPLALEVLGSFLFYKSVPEWESALQKLKENPNIEVQNVLKISF 441

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGLD +EQ IFLD  CFFKG ++  V   +      A+IGI  L  K L+T+  N IT+H
Sbjct: 442 DGLDKKEQEIFLDIVCFFKGWNENDVTRLVK----HARIGIRVLSDKCLITLCGNTITIH 497

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLKE------ 493
           DL++EMG EIVR +  ++PGK SRLW P+DI  VL +   T     + LD  K       
Sbjct: 498 DLVEEMGREIVRHKHPEEPGKWSRLWDPKDISLVLRKKMGTKAVEALFLDMCKSREISFT 557

Query: 494 -----------------------------LYLGGCSNLKRFPE--ISCNIEDLDLKETAI 522
                                        L+  G S LK  P      N+ +L+L+ + I
Sbjct: 558 TEAFKRMRRLRLLKIYWSWGFLNYMGKGYLHWEGYS-LKSLPSNFDGENLIELNLQHSNI 616

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
           E L      L  L  L+L+    L  +     N+ +L +LN+ GC  L+ +   +G L+ 
Sbjct: 617 EHLWQGEKYLEELKILNLSESQQLNEI-PHFSNMSNLEQLNVKGCRSLDNVDSSVGFLKK 675

Query: 583 LEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           L  LNL   +    +PS+++ L  L  L L +C  L++ PE+     +    C  L  LS
Sbjct: 676 LTLLNLRGCQKIRSLPSTIQNLVSLKKLNLYDCSNLENFPEI-----MEDMECLYLLNLS 730

Query: 642 NSSTLLTRSSKHWDIFNFSNCSN 664
            + T +   SK  +     N  N
Sbjct: 731 GTLTTIDSGSKALEFLRLENDPN 753


>gi|357504435|ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
 gi|355497521|gb|AES78724.1| TMV resistance protein N [Medicago truncatula]
          Length = 1137

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 274/749 (36%), Positives = 363/749 (48%), Gaps = 153/749 (20%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
           VFLSFRG+D R  F  HL A+L R  I+TF DD  L RG  IS  L+ AIE S  +I+I 
Sbjct: 26  VFLSFRGEDTRQGFTDHLFASLERRGIKTFKDDHDLERGEVISYELNKAIEESMFAIIIL 85

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS--------------- 121
           S  YASS WCL+EL KI+E    +GQ V P+FY VDPSD  +                  
Sbjct: 86  SPNYASSTWCLDELKKIVECSKSFGQAVFPIFYGVDPSDVRHQRGSFDEAFRKHEEKFRK 145

Query: 122 ---------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                           G+ G       E+ L+E  V  I KKL         D LVG++S
Sbjct: 146 DRTKVERWRDALREVAGYSGWDSKGRHEASLVETIVEHIQKKLIPKLKVCT-DNLVGIDS 204

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            IKE+ S L         +GIWG+GGIGKTTIA  +Y  I + F+ S F+ NIR+   K 
Sbjct: 205 RIKEVYSLLAMDLNNVRFIGIWGMGGIGKTTIARLVYEAIKNEFKVSCFLANIRETVSKT 264

Query: 227 GGLANI------HLNFERRRLSRM--------------KVLIVFYDLTDLKQIDLLIGRL 266
             LA+I      HLN        +              KVL+V  D+++L Q++ L G+ 
Sbjct: 265 DNLAHIQMELLSHLNIRSNDFYNVHDGKKILANSFNNKKVLLVLDDVSELSQLENLAGKQ 324

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
           + F PGSRVIIT+RD  LL  H    V   ++ K L  N++L LF   AF +  P   +L
Sbjct: 325 EWFGPGSRVIITSRDKHLLMTHG---VHETYKAKGLVKNEALKLFCLKAFKEIQPKEEYL 381

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
            L   V++Y  G+PLAL+VLGS+L G + E W SA+ +++  PH  I   LK+SYD L  
Sbjct: 382 SLCKEVVEYTRGLPLALEVLGSHLHGRTVEVWHSALEQIRSGPHYKIHDTLKISYDSLQS 441

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI--SNNKITMHDLL 444
            E+N+FLD ACFFKG D   V+  L+ C +  KIGI  L+ +SL T+   +NK+ MHDLL
Sbjct: 442 MEKNLFLDIACFFKGMDIDEVIEILEGCGYHPKIGIDILIERSLATLDRGDNKLWMHDLL 501

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN------------------------- 479
           QEMG  IV +ES  DPGKRSRLW  +D+ QVL +N                         
Sbjct: 502 QEMGRNIVFEESPNDPGKRSRLWSQKDVDQVLRQNKGTDKIQGIAMDLVQPYEASWKIEA 561

Query: 480 --------------TSLPTGINL--DSLKELYLGGCSNLKRFPEISCNIEDLDLK--ETA 521
                           LP G+N    SL+ L   GC  L+  P  +  +E + +K   + 
Sbjct: 562 FSKISQLRLLKLCEIKLPLGLNRFPSSLRVLDWSGCP-LRTLPLTNHLVEIVAIKLYRSK 620

Query: 522 IEEL------------------------PSSIG--NLSRLVDLDLTNCSGLKSVSS---- 551
           IE+L                        P  +G  NL  LV   L  C+ L  +      
Sbjct: 621 IEQLWHGTQFLENLKSINLSFSKSLKRSPDFVGVPNLEFLV---LEGCTSLTEIHPSLLS 677

Query: 552 ----RLCNLKSLRR---------------LNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
                L NLK  +R               L+LSGC + + LPE    +E+L  L+L E  
Sbjct: 678 HKKLALLNLKDCKRLKTLPCKIEMSSLKGLSLSGCCEFKHLPEFDETMENLSKLSLEETA 737

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +K+PSS+  L  L  L L+NCK L  LP
Sbjct: 738 IKKLPSSLGFLVSLLSLDLENCKNLVCLP 766



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 100/200 (50%), Gaps = 19/200 (9%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           +LP  I + SLK L L GC   K  PE    +E+L    L+ETAI++LPSS+G L  L+ 
Sbjct: 694 TLPCKIEMSSLKGLSLSGCCEFKHLPEFDETMENLSKLSLEETAIKKLPSSLGFLVSLLS 753

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL NC  L  + + +  LKSL  LN+SGC KL   PE +  ++SLE L   E   E++P
Sbjct: 754 LDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHSFPEGLKEMKSLEELFANETSIEELP 813

Query: 598 SSMKQLSKLSDLRLQNCK---------------RLQSLPELPCGSSIHARHC-TSLKTLS 641
           SS+  L  L  +    CK               +    P+ P G  +  + C  SL+ L+
Sbjct: 814 SSVFFLENLKVISFAGCKGPVTKSVNTFLLPFTQFLGTPQEPNGFRLPPKLCLPSLRNLN 873

Query: 642 NSSTLLTRSSKHWDIFNFSN 661
            S   L+  S   D  N S+
Sbjct: 874 LSYCNLSEESMPKDFSNLSS 893



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 97/188 (51%), Gaps = 31/188 (16%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           LP  ++ L SL  L + GCS L  FPE      ++E+L   ET+IEELPSS+  L  L  
Sbjct: 765 LPNTVSELKSLLILNVSGCSKLHSFPEGLKEMKSLEELFANETSIEELPSSVFFLENLKV 824

Query: 538 LDLTNCSG--LKSVSS----------------------RLCNLKSLRRLNLSGC-LKLEK 572
           +    C G   KSV++                      +LC L SLR LNLS C L  E 
Sbjct: 825 ISFAGCKGPVTKSVNTFLLPFTQFLGTPQEPNGFRLPPKLC-LPSLRNLNLSYCNLSEES 883

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-IHA 631
           +P++  NL SL  LNL+  +F + PSS+ +L KL  LRL  C+ LQ  PE P     + A
Sbjct: 884 MPKDFSNLSSLVVLNLSGNNFVRPPSSISKLPKLEYLRLNCCEMLQKFPEFPSSMRLLDA 943

Query: 632 RHCTSLKT 639
            +C SL+T
Sbjct: 944 SNCASLET 951


>gi|147834354|emb|CAN69843.1| hypothetical protein VITISV_019700 [Vitis vinifera]
          Length = 1284

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 271/736 (36%), Positives = 392/736 (53%), Gaps = 125/736 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VFLSFRG+D R+ F  HL  A     I TF DD+ L RG  I+  + +AIE SKI ++
Sbjct: 25  YEVFLSFRGEDTRYGFTDHLYEAFISHGIRTFRDDEELERGGMIASDILNAIEESKIFVI 84

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSL------- 122
           IFSE YA+SRWCL+ELV+I E      ++++PVFY VDPS+ G     Y  +        
Sbjct: 85  IFSENYATSRWCLDELVRIFECTATEKRLILPVFYHVDPSEVGEQSGSYEKAFVDHEKEA 144

Query: 123 ---------GW---------MGIFDIPTS--ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                     W         +  +D+     E+ LI+  ++ I ++L+          +V
Sbjct: 145 DEEKKEEIQKWRIALRKAANLAGYDLQKYGYETRLIKEIIDVILRELNSKLLLHVSKNIV 204

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G+   +KE++S +   S +   +GI+G+GGIGKTTIA  +Y+NIS  FE   F++N+R+ 
Sbjct: 205 GMNFHLKELKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVRER 264

Query: 223 S-----------EKVGGLA--------NIH--LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           S           E + G+A        NIH  +N  R R    +VL++  D+   +Q+  
Sbjct: 265 SKDHSSLLQLQKELLNGVAKGKYLKISNIHEGVNVIRNRFLSKRVLLILDDVDKSEQLQF 324

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G    F P SR+IIT+RD  LL+ +    +   +EVK L Y +S+ LF  +AF QN  
Sbjct: 325 LVGEHGWFGPRSRIIITSRDQHLLEEYE---MDASYEVKVLDYEESMQLFCLHAFKQNIL 381

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              +++LSN V+ Y NG+PLAL++LGS+L   S+ EWES + KLKR P+M++Q VLK+S+
Sbjct: 382 RKDYVDLSNDVVNYVNGLPLALEILGSFLFNKSKLEWESTLQKLKRKPNMNVQNVLKISF 441

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGLD+ E+ IFLD ACFFKG ++  V   LD     A I I  L  K L+T+S+N I MH
Sbjct: 442 DGLDEIEKEIFLDVACFFKGWNETDVTRLLD----HANIVIRVLSDKCLITLSHNIIWMH 497

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD---------- 489
           DL+QEMG EIVRQ   K+PGK SRLW PEDI  VL     T    GI LD          
Sbjct: 498 DLVQEMGREIVRQNHPKEPGKWSRLWDPEDICLVLRRKMGTEAIEGIFLDMSRSREISFT 557

Query: 490 --SLKEL----------------YLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPS 527
             + + +                Y+G        PE     S ++  L  +  +++ LPS
Sbjct: 558 TEAFRRMERLRLFKVYWSHGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEGYSLKSLPS 617

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
           +      L++L+L + S ++ +      L+ L+ L LS    L ++P    N+ +LE LN
Sbjct: 618 NFHG-ENLIELNLKH-SNIEQLWQGKKYLEELKMLTLSESQLLNEIP-HFSNMPNLEQLN 674

Query: 588 --LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP--------------------ELPC 625
             L EK  +K+ SS+  L KL+ L L+ C+++ SLP                    ELP 
Sbjct: 675 IELCEK-LDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAIDELP- 732

Query: 626 GSSIHARHCTSLKTLS 641
            SSIH  H T L+TLS
Sbjct: 733 -SSIH--HLTQLQTLS 745



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 94/149 (63%), Gaps = 4/149 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SL+EL L GCSNL+ FPEI  ++E   +L+L  T I+ELP SIG L+ L 
Sbjct: 825 SLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLT 884

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L L  C  L+S+ S +C LKSL  L+L  C  LE  PE + N+E L  L+L+    +++
Sbjct: 885 FLGLQCCQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKEL 944

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           PSS++ L+ L+ +RL   K L+SLP   C
Sbjct: 945 PSSIEYLNHLTSMRLVEXKNLRSLPSSIC 973



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 90/145 (62%), Gaps = 4/145 (2%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I  L SL+EL L  CSNL+ FPEI  N+E    LDL  T I+ELPSSI  L+ L 
Sbjct: 896  SLPSSICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLT 955

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             + L     L+S+ S +C LK L +LNL GC  LE  PE + ++E L+ L+L+    +K+
Sbjct: 956  SMRLVEXKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKL 1015

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLP 621
            PSS+  L+ L+  RL  C  L+SLP
Sbjct: 1016 PSSIGYLNHLTSFRLSYCTNLRSLP 1040



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 92/149 (61%), Gaps = 4/149 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SL+EL L GCSNL  FPEI  N+E   +L+L  T ++ LPSSI  L+ L 
Sbjct: 754 SLPSSICRLKSLEELDLYGCSNLXTFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLT 813

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L  C  L+S+ S +  LKSL  L+L GC  LE  PE + ++E L  LNL+    +++
Sbjct: 814 RLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTCIKEL 873

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           P S+  L+ L+ L LQ C+ L+SLP   C
Sbjct: 874 PPSIGYLNHLTFLGLQCCQNLRSLPSSIC 902



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 3/137 (2%)

Query: 488 LDSLKELYLGGCSNLKRFP---EISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L  L  L L GC  +   P   +   +++ L L   AI+ELPSSI +L++L  L +  C 
Sbjct: 691 LKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAIDELPSSIHHLTQLQTLSIRGCE 750

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S+ S +C LKSL  L+L GC  L   PE + N+E L  LNL+    + +PSS++ L+
Sbjct: 751 NLRSLPSSICRLKSLEELDLYGCSNLXTFPEIMENMEWLTELNLSGTHVKGLPSSIEYLN 810

Query: 605 KLSDLRLQNCKRLQSLP 621
            L+ L L+ CK L+SLP
Sbjct: 811 HLTRLELRCCKNLRSLP 827



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 16/160 (10%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I  L  L++L L GCS+L+ FPEI  ++E    LDL  T+I++LPSSIG L+ L 
Sbjct: 967  SLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLT 1026

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
               L+ C+ L+S+ S +  LKSL +L+LSG       P  +      E L L++ +   I
Sbjct: 1027 SFRLSYCTNLRSLPSSIGGLKSLTKLSLSG------RPNRVT-----EQLFLSKNNIHHI 1075

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
            PS + QL  L  L + +CK L+ +P+LP     I A  CT
Sbjct: 1076 PSVISQLCNLECLDISHCKMLEEIPDLPSSLREIDAHGCT 1115



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 12/191 (6%)

Query: 441 HDLLQEMGGEIVR---QESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLG 497
           H  +  MG E  +    E  + P    R  H E  Y +     SLP+  + ++L EL L 
Sbjct: 576 HGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEG-YSL----KSLPSNFHGENLIELNLK 630

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN---CSGLKSVSSRLC 554
             SN+++  +    +E+L +   +  +L + I + S + +L+  N   C  L  V S + 
Sbjct: 631 H-SNIEQLWQGKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELCEKLDKVDSSIG 689

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
            LK L  LNL GC K+  LP  I  L SL+ L L     +++PSS+  L++L  L ++ C
Sbjct: 690 ILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAIDELPSSIHHLTQLQTLSIRGC 749

Query: 615 KRLQSLPELPC 625
           + L+SLP   C
Sbjct: 750 ENLRSLPSSIC 760



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 5/140 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK L L     L   P  S   N+E L+++    ++++ SSIG L +L  L+L  C 
Sbjct: 644 LEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELCEKLDKVDSSIGILKKLTLLNLRGCQ 703

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQL 603
            + S+ S +  L SL+RL L   + +++LP  I +L  L+ L++   ++   +PSS+ +L
Sbjct: 704 KISSLPSTIQYLVSLKRLYLHS-IAIDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRL 762

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
             L +L L  C  L + PE+
Sbjct: 763 KSLEELDLYGCSNLXTFPEI 782


>gi|93117599|gb|ABE99702.1| TIR-NBS-LRR disease resistance-like protein [Populus trichocarpa]
          Length = 1142

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 253/736 (34%), Positives = 375/736 (50%), Gaps = 140/736 (19%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL AA  +  I TF D +++ RG EIS  L  AI+ SK
Sbjct: 48  PKGAYDVFLSFRGEDNRKTFTDHLYAAFVQAGIHTFRDQNEIPRGEEISKHLHKAIQESK 107

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL--- 122
           IS+V+FS+GYASSRW  N          K  QIV+P+FY +DPS+       +  +    
Sbjct: 108 ISVVVFSKGYASSRWSKNR---------KTDQIVLPIFYDIDPSEVRKQTGSFAKAFHRH 158

Query: 123 ----------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKD 159
                                 GW  + D+    ES  I+  V D+  KL   +  +   
Sbjct: 159 EEAFTEKVKEWRKALEEAGNLSGW-NLNDMENGHESKFIQEIVKDVLNKLDPKY-INVAT 216

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            LVG++ ++  I   L + + E   VGI G+ GIGKT+IA  +++     FEGS F+ NI
Sbjct: 217 HLVGIDPLVLAISDFLSTAADEVRIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNI 276

Query: 220 RDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQ 258
            + SE+  GL  +                      L   + R+   +VL+V  DL    Q
Sbjct: 277 NETSEQSNGLVLLQEQLLHDILKQNTVNISNVVRGLVLIKERICHKRVLVVVDDLAHQNQ 336

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L+G    F PGSRVIITT+D  LL      +V   + V+EL  ++SL LFS +AFG 
Sbjct: 337 LNALMGERSWFGPGSRVIITTKDEHLLL-----KVDRTYRVEELKRDESLQLFSWHAFGD 391

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
             PA  ++ELSN V+ Y  G+PLAL+VLGS L G +   W+  +++L+++P+ +IQK L+
Sbjct: 392 TKPAKDYVELSNDVVDYCGGLPLALEVLGSCLSGKNRARWKCLIDELRKIPNREIQKKLR 451

Query: 379 VSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTI-SN 435
           +S+D LDD E QN FLD ACFF G ++  V   L+A C ++ +  +  L  +SL+ + + 
Sbjct: 452 ISFDSLDDHELQNTFLDIACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAF 511

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS--- 490
            KI+MHDLL++MG +I+ +ES   PGKRSR+W  ED + VLN++  T +  G+ LD+   
Sbjct: 512 GKISMHDLLRDMGRDIIHKESPGHPGKRSRIWQREDAWNVLNKHMGTEVVEGLALDARAS 571

Query: 491 ---------------LKELYLGGC--------------------SNLKRFPE--ISCNIE 513
                          LK L + G                       LK FP   +  N+ 
Sbjct: 572 EDKSLSTGSFTKMRFLKLLQINGVHLTGPFKLLSEELIWICWLECPLKSFPSDLMLDNLV 631

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTN----------------------CSGLKSVSS 551
            LD++ + I+EL      L++L  L+L++                      CS L  V  
Sbjct: 632 VLDMQHSNIKELWKEKKILNKLKILNLSHSKHLIKTPNLHSSSLEKLMLEGCSSLVEVHQ 691

Query: 552 RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL- 609
            + +LKSL  LNL GC +++ LPE I ++ SL+ LN++     EK+P  M  +  L++L 
Sbjct: 692 SVGHLKSLILLNLKGCWRIKILPESICDVNSLKSLNISGCSQLEKLPERMSDIKSLTELL 751

Query: 610 --RLQNCKRLQSLPEL 623
              +QN + L S+  L
Sbjct: 752 ADEIQNEQFLSSIGHL 767



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 37/215 (17%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  I +++SLK L + GCS L++ PE   +I+ L      E   E+  SSIG+L  L  
Sbjct: 713 LPESICDVNSLKSLNISGCSQLEKLPERMSDIKSLTELLADEIQNEQFLSSIGHLKHLRK 772

Query: 538 LDL------------TNCSGLKS-------------VSSRLCNLKSLRRLNLSGCLKLEK 572
           L L            T+C    S             + +   + +S++RL L+     E 
Sbjct: 773 LSLRVSNFNQDSLSSTSCPSPISTWISASVLRVQPFLPTSFIDWRSVKRLKLANYGLSES 832

Query: 573 LPEEI--GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
               +  G L SL+ LNL+   F  +PS +  L+KL  LR+QNC  L S+ ELP     +
Sbjct: 833 ATNCVYFGGLSSLQELNLSGNKFLSLPSGISVLTKLQHLRVQNCSNLVSISELPSSLEKL 892

Query: 630 HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           +A  C S+K +      L   SK   I +   C N
Sbjct: 893 YADSCRSMKRVC-----LPIQSKTNPILSLEGCGN 922



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 7/147 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEI-SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           L+ LK L L    +L + P + S ++E L L+  +++ E+  S+G+L  L+ L+L  C  
Sbjct: 650 LNKLKILNLSHSKHLIKTPNLHSSSLEKLMLEGCSSLVEVHQSVGHLKSLILLNLKGCWR 709

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS---MKQ 602
           +K +   +C++ SL+ LN+SGC +LEKLPE + +++SL  L   E   E+  SS   +K 
Sbjct: 710 IKILPESICDVNSLKSLNISGCSQLEKLPERMSDIKSLTELLADEIQNEQFLSSIGHLKH 769

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSI 629
           L KLS LR+ N  +  SL    C S I
Sbjct: 770 LRKLS-LRVSNFNQ-DSLSSTSCPSPI 794


>gi|357469153|ref|XP_003604861.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355505916|gb|AES87058.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1897

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 263/731 (35%), Positives = 371/731 (50%), Gaps = 125/731 (17%)

Query: 7    SINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSS 64
            S N    PK +DVFLSFRG+D R  F+SHL ++L    I  F DD ++ RG++IS SL  
Sbjct: 534  SSNKTDQPKMYDVFLSFRGEDSRAKFISHLYSSLQNAGIYVFKDDDEIQRGDQISISLLR 593

Query: 65   AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------- 116
            AI  S+I IV+ S  YA+SRWC+ EL KI+E     G +VVPVFY VDPS+         
Sbjct: 594  AIGHSRIFIVVLSTNYANSRWCMLELEKIMEIGRTGGLVVVPVFYEVDPSEVRRREGQFG 653

Query: 117  ----GYCPSLG--------W-MGIFDIPT----------SESVLIEGNVNDISKKL--SD 151
                   P++         W   +FDI +          +ES  I+  V  +++ L  ++
Sbjct: 654  KAFEKLIPTISVDESTKSNWKRALFDIGSIAGFVLIDSRNESADIKNIVKHVTRLLDRTE 713

Query: 152  LFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
            LF +++    VGVES +  +   L +  S +   +GIWG+GG+GKTTIA AIY+ I   F
Sbjct: 714  LFVAEHP---VGVESRVDAVTKLLNIQNSEDVLLLGIWGMGGVGKTTIAKAIYNQIGRKF 770

Query: 211  EGSYFMQNIRDESEKVGGLANIHL---------------------NFERRRLSRMKVLIV 249
            +G  F+ NIR+  E      ++                       N  + RL++ +VL+V
Sbjct: 771  DGRSFLLNIREFCETDANHVSLQQQILCDVYKTTAFKIRDIESGKNILKERLAQNRVLLV 830

Query: 250  FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
              D+ +L Q+  L G  + F PGSR+IITTRD+ LL   R SRV  V+ ++E+  ++SL 
Sbjct: 831  LDDVNELDQLKALCGSREWFGPGSRIIITTRDMHLL---RSSRVDLVYTIEEMDESESLE 887

Query: 310  LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
            LFS +AF Q  PA GF   S  VI Y+  +PLAL+VLG YL      EW+  + KLK +P
Sbjct: 888  LFSWHAFKQPSPAEGFATHSTDVIAYSGRLPLALEVLGCYLSDCEITEWQKVLEKLKCIP 947

Query: 370  HMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
            H ++QK LKVS+DGL D  EQ IFLD ACF  G D+   +  L+ C F A IGI  LV +
Sbjct: 948  HDEVQKKLKVSFDGLKDVTEQQIFLDIACFLIGMDKNDAIKILNGCGFFADIGIKVLVER 1007

Query: 429  SLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTG 485
            SLVT+ N NK+ MHDLL++MG +I+ +ES  DP  RSRLW  E++Y VL   + T    G
Sbjct: 1008 SLVTVDNRNKLRMHDLLRDMGRQIIYEESPFDPENRSRLWRREEVYDVLLKQKGTEAVKG 1067

Query: 486  INL------------------DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS 527
            + L                  + L+ L L G      F  +S  +  L      +   P+
Sbjct: 1068 LALVFPRKNKVCLNTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLYWHGFPLTYTPA 1127

Query: 528  SIGNLSRLV--------------DLDLTNCSGLKSV----------------------SS 551
                 S +V                D+  C G+  V                      +S
Sbjct: 1128 EFQQGSLIVIQLKYSNLKQIWKEGQDVPTCDGMGGVEGPPSPHVVGSLVASEVLEVPPAS 1187

Query: 552  RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLR 610
            R+  LK+L+ LNLS  L L + P +   + +LE L L +      +  S+  L KL  + 
Sbjct: 1188 RM--LKNLKILNLSHSLDLTETP-DFSYMPNLEKLVLKDCPSLSTVSHSIGSLHKLLLIN 1244

Query: 611  LQNCKRLQSLP 621
            L +C RL+ LP
Sbjct: 1245 LTDCIRLRKLP 1255



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 160/286 (55%), Gaps = 27/286 (9%)

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH---------------LNFE-- 237
           K+TIA AIY  +  +FE    ++N+R   ++ GG  ++                L+ E  
Sbjct: 252 KSTIAQAIYDQVGPYFEHKSLLKNVRTFWQQNGGQVSLQKKLLMAVNKTTEKKILHIESG 311

Query: 238 ----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
               + RL    VL++  D+  L+Q+  L G  D F PGS++II TRD  LL  H    V
Sbjct: 312 KVILKERLRHKSVLLILDDVNKLEQLKSLCGNRDWFGPGSKIIIITRDRHLLMEHG---V 368

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
            H+++VK+L  ++S+ LF+  AF Q     GF ELS  ++ Y+ G+PLAL+ LG +L G 
Sbjct: 369 DHIYKVKQLEESESIELFNWGAFSQATTPQGFSELSRQLVAYSKGLPLALKALGEFLHGK 428

Query: 354 SEEEWESAVNKLKR--MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL 411
              EW+  +  L+R   P  ++ + L+ S+D L DEE++IFLD ACFF G DQ  V+  +
Sbjct: 429 DALEWKRVLKSLERFSFPDQEVLQALETSFDDLKDEEKHIFLDIACFFNGMDQNYVLRTI 488

Query: 412 DACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQES 456
           +       + IS L  KSL+TI  NNK+ MH LLQ M  +I+++ES
Sbjct: 489 NRSTQCTSLQISLLEDKSLLTIGENNKLEMHGLLQAMARDIIKRES 534



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 3/121 (2%)

Query: 483  PTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLD 539
            P    L +LK L L    +L   P+ S   N+E L LK+  ++  +  SIG+L +L+ ++
Sbjct: 1185 PASRMLKNLKILNLSHSLDLTETPDFSYMPNLEKLVLKDCPSLSTVSHSIGSLHKLLLIN 1244

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
            LT+C  L+ +   +  LKSL  L LSGC  ++KL E++  +ESL  L   +    K+P S
Sbjct: 1245 LTDCIRLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVPFS 1304

Query: 600  M 600
            +
Sbjct: 1305 I 1305



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 8/114 (7%)

Query: 4   SSSSINMIPHPK---HDVFLSFRGKDVR-HNFVSHLNAALCREK-IETFIDDKLN-RGNE 57
           S+ SI    +PK   +DV+LSF  +D   H+FV  +  AL R+  ++ F +++ +  G+ 
Sbjct: 16  STPSIRTPTNPKRARYDVYLSFCDQDKDLHSFVFSIYNALSRKAGVDVFWENERDGYGDR 75

Query: 58  ISP-SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFY 109
             P S+ + I   K+ +++FS  Y +SR CL+E  KI E  + K   +V+PVFY
Sbjct: 76  EKPTSVLNVIRDCKVFVIVFSRDYFNSRSCLHEFKKITECCRTKDDLMVLPVFY 129


>gi|357515097|ref|XP_003627837.1| NBS resistance protein [Medicago truncatula]
 gi|355521859|gb|AET02313.1| NBS resistance protein [Medicago truncatula]
          Length = 1731

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 262/726 (36%), Positives = 393/726 (54%), Gaps = 94/726 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA SSS  +     K+DVF+SFRG+D R  F SHL+AALCR  + T+ID K+ +G+++  
Sbjct: 1   MAFSSS--HGASQKKYDVFISFRGEDTRTCFTSHLHAALCRTHLHTYIDYKIEKGDDVWS 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY---GQIVVPVFYLVDPSD-- 115
            L  AI+ S + +V+FSE YASS WCLNELV+I+E  NK      +VVPVFY VDPS   
Sbjct: 59  ELVKAIKQSTLFLVVFSENYASSTWCLNELVEIMECSNKNEDDNVVVVPVFYHVDPSHVR 118

Query: 116 ---AGYCPSL---------------GWM-GIFDIPT----------SESVLIEGNVNDIS 146
                Y  +L                W   +F              +ES LIE     + 
Sbjct: 119 KQTGSYGTALEKHMEQDNNGDKMMQNWKNALFQAANLSGFHSATYRTESDLIEDITRVVL 178

Query: 147 KKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
            KL+    +D     +  E+    I+S +   S +   +GIWG+GG GKTT+AS ++   
Sbjct: 179 GKLNQQCTNDLTCNFILDENYWS-IQSLIKFDSAQVQIIGIWGMGGTGKTTLASILFQRF 237

Query: 207 SSHFEGSYFMQNIRDESEKVG----------GLANIHLNFE---------RRRLSRMKVL 247
           S  +EGS   + + + S++ G           L    L+ +         RRRL  MK  
Sbjct: 238 SFKYEGSCLFEKVTEVSKRHGINYACNKLLSKLLREDLDIDSPKLIPSMIRRRLKSMKSF 297

Query: 248 IVFYDLTDLKQIDLLIGRLDGFV-PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           IV  D+ + + +  LIG   G++  GS VI+TTRD  +L +     +  ++EVK+++  +
Sbjct: 298 IVLDDVHNSELLQNLIGVGHGWLGSGSTVIVTTRDKHVLIS---GGIDKIYEVKKMNSRN 354

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           S+ LFS NAF +  P  G++ELS   + YANG PLAL+VLGS L+  SE EW+ A+ KLK
Sbjct: 355 SVKLFSMNAFDKVSPKDGYVELSKRAVDYANGNPLALKVLGSLLRCKSEIEWDCALAKLK 414

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
           ++P+ +I  + ++SYD LDD+E++IFLD ACFFKG+++  +   L+ C F A IGIS L+
Sbjct: 415 KIPNNEIDSIFRLSYDELDDKEKDIFLDIACFFKGHERNSITKILNECGFFADIGISHLL 474

Query: 427 GKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN------ 479
            K+LV + S N I MHDL+QEMG +IVR+ES K+PG+RSRL  P+++Y VL  N      
Sbjct: 475 DKALVRVDSKNCIQMHDLIQEMGKQIVREESHKNPGQRSRLCDPKEVYDVLKNNRGSKNV 534

Query: 480 ------TSLPTGINL-----DSLKELYLGGCSNLKRFPEISC---------NIEDLDLKE 519
                  +  T +NL     + +K L L    + K    +S          N+       
Sbjct: 535 EAIFFDATQCTHVNLRPDTFEKMKNLRLLAFQDQKGVKSVSLPHGLGLLPENLRYFLWDG 594

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
             ++ LP +   L  LV+L LT  S ++ + + + N+ +L +++LSG  KL + P   G+
Sbjct: 595 YPLKTLPPTFC-LEMLVELSLTG-SLVEKLWNGVLNVPNLEKIDLSGSTKLIECPNVSGS 652

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCT 635
             +L+Y+ L E +   ++ SS+  L KL  L +  C  L+S+    C  ++    A +C 
Sbjct: 653 -PNLKYVLLDECESMPEVDSSIFHLQKLEVLNVSGCTSLKSISSNTCSPALRQLSAINCF 711

Query: 636 SLKTLS 641
           +LK LS
Sbjct: 712 NLKDLS 717


>gi|356560719|ref|XP_003548636.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1139

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 245/687 (35%), Positives = 373/687 (54%), Gaps = 87/687 (12%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVF++FRG+D R NFVSHL +AL    + TF+D+    +G E++  L   IEG +
Sbjct: 12  PQWIYDVFINFRGEDTRRNFVSHLYSALSNAGVNTFLDEMNYPKGEELNEGLLRTIEGCR 71

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG-- 123
           I +V+FS  Y +S WCL EL KI+E    YG IV+P+FY VDPSD       +  +L   
Sbjct: 72  ICVVVFSTNYPASSWCLKELEKIIECHKTYGHIVLPIFYDVDPSDIRHQQGAFGKNLKAF 131

Query: 124 -----------WMGI---------FDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                      W  +         +D+    +E+  ++  V D+  KL + F    +   
Sbjct: 132 QGLWGESVLSRWSTVLTQAANFSGWDVSNNRNEAQFVKEIVEDVLTKLDNTFMPITEFP- 190

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ES ++E+   + + ST+   VGIWG+GG+GKTT A AIY+ I   F G  F+++IR+
Sbjct: 191 VGLESHVQEVIGYIENQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFTGRCFIEDIRE 250

Query: 222 --ESEKVGGLANIHLNFE----------------------RRRLSRMKVLIVFYDLTDLK 257
             E+++ G   ++HL  +                        +LS  K LIV  D+ +  
Sbjct: 251 VCETDRRG---HVHLQEQLLSDVLKTKVNIKSVGIGRAMMESKLSGTKALIVLDDVNEFG 307

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+ +L G    F  GS VIITTRDV+LL  H+  +V  V++++E+  N SL LFS +AFG
Sbjct: 308 QLKVLCGNRKWFGQGSIVIITTRDVRLL--HK-LKVDFVYKMEEMDENKSLELFSWHAFG 364

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           +  P   F EL+  V+ Y  G+PLAL+V+GSYL   +++EWES ++KLK +P+  +Q+ L
Sbjct: 365 EAKPIEEFDELARNVVAYCGGLPLALEVIGSYLSERTKKEWESVLSKLKIIPNDQVQEKL 424

Query: 378 KVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
           ++SY+GL D  E++IFLD  CFF G D+  V   L+ C   A IGI+ L+ +SLV ++ N
Sbjct: 425 RISYNGLCDHMEKDIFLDVCCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKN 484

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINL----- 488
           NK+ MH LL++MG EI+R+ S K PGKRSRLW  ED   VL +NT      G+ L     
Sbjct: 485 NKLGMHPLLRDMGREIIRESSTKKPGKRSRLWFHEDSLNVLTKNTGTKAIEGLALKLHSS 544

Query: 489 ----------DSLKELYLGGCSNLK---RFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
                      ++K+L L    +++    +  +  ++  +  K   ++ +P +   L  +
Sbjct: 545 SRDCFKAYAFKTMKQLRLLQLEHVQLTGDYGYLPKHLRWIYWKGFPLKYMPKNF-YLGGV 603

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
           + +DL + S L+ V      L  L+ LNLS    L + P +   L SLE L L +     
Sbjct: 604 IAIDLKD-SNLRLVWKDPQVLPWLKILNLSHSKYLTETP-DFSKLPSLEKLILKDCPSLC 661

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           K+  S+  L  L  + L++C  L +LP
Sbjct: 662 KVHQSIGDLQNLLWINLKDCTSLSNLP 688



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L L     L   P+ S   ++E L LK+  ++ ++  SIG+L  L+ ++L +C+
Sbjct: 623 LPWLKILNLSHSKYLTETPDFSKLPSLEKLILKDCPSLCKVHQSIGDLQNLLWINLKDCT 682

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L ++   +  LKSL+ L +SG  +++KL E+I  +ESL  L   +   +++P S+ +L 
Sbjct: 683 SLSNLPREIYKLKSLKTLIISGS-RIDKLEEDIVQMESLTTLIAKDTAVKQVPFSIVRLK 741

Query: 605 KLSDLRL 611
            +  + L
Sbjct: 742 SIGYISL 748


>gi|357487985|ref|XP_003614280.1| TMV resistance protein N [Medicago truncatula]
 gi|355515615|gb|AES97238.1| TMV resistance protein N [Medicago truncatula]
          Length = 1024

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 251/723 (34%), Positives = 380/723 (52%), Gaps = 114/723 (15%)

Query: 1   MASSSSSINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEI 58
           M+SSS       HP+ +DVF+SFRG+D R+  VSHL+AAL    + TF+DD KL +G E+
Sbjct: 1   MSSSSDD-----HPRIYDVFISFRGEDTRNTIVSHLHAALQNSGVNTFLDDQKLKKGEEL 55

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS---- 114
            P+L  AIE SKISIV+ S  YA S WCL+ELV I++ +  YG+ VVPVFY V+P+    
Sbjct: 56  EPALRMAIEQSKISIVVLSPNYAGSSWCLDELVHIMDCRESYGRTVVPVFYRVNPTQVRH 115

Query: 115 ---DAGYCPSL------------------------GWMGIFDIPTSESVLIEGNVNDISK 147
              D G    L                        GW   ++I  +E  L++G V  I  
Sbjct: 116 QTGDFGKALELTATKKEDQQLSKWKRALTEVSNISGWR--YNISRNEGELVKGIVEYILT 173

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           KL+    S   +  +G+ES +++I   +   S +   +GIWG+GG GKTT A A+Y+ I 
Sbjct: 174 KLNISLLSIT-EYPIGLESRVQQITKIIDDQSWKVCIIGIWGMGGSGKTTTAKALYNQIH 232

Query: 208 SHFEG-SYFMQNIRDE----------------------SEKVGGLANIHLNFERRRLSRM 244
             F+G + F+++IR+                        +K+ G+A +  N    RL   
Sbjct: 233 RRFQGRTSFVESIREVCDNNSRGAITLQKQLLLDLFEIKQKIHGVA-LGKNKIMTRLQGQ 291

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KVL+V  D+T  +Q+  L         GS +IITTRD++LLK+ +   V HV+ + E+  
Sbjct: 292 KVLVVLDDVTKSEQLKALCENPKLLGSGSVLIITTRDLRLLKSFK---VDHVYTMTEMDK 348

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SL LFS +AF Q +P   F ELS  V+ Y  G+PLAL+VLG YL   +E+EW  A++K
Sbjct: 349 HQSLELFSCHAFQQPNPRDKFSELSRNVVAYCKGLPLALEVLGRYLSERTEQEWRCALSK 408

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           L+++P+ D+Q++L++SYDGL+D  Q +IFLD  CFF G ++  V   L+ C   A  GIS
Sbjct: 409 LEKIPNNDVQQILRISYDGLEDYTQKDIFLDICCFFIGKNRADVTEILNGCGLHAYSGIS 468

Query: 424 RLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENT 480
            L+ +SLV +  NN + MHDLL++MG  I  + SIK+P K SRLW  +D+  VL     T
Sbjct: 469 ILIERSLVKVEKNNTLGMHDLLRDMGRSIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGT 528

Query: 481 SLPTGI------------------NLDSLKELYLGGCSNLKRF--------------PEI 508
            +  G+                   +  L+ L L G   +  +              P  
Sbjct: 529 EIVEGLIFELPRTHRTRFGTNAFQEMKKLRLLKLDGVDLIGDYGLISKQLRWVDWQRPTF 588

Query: 509 SCNIEDLDLKETAIEELP-SSIGN-------LSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
            C  +D DL    + EL  S+IG        L +L  L++++   LK ++     L +L 
Sbjct: 589 KCIPDDSDLGNLVVFELKHSNIGQVWQEPKLLGKLKILNVSHNKYLK-ITPDFSKLPNLE 647

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           +L +  C  L ++ + IG+L+++  +NL + K    +P  + +L  +  L L  C +++ 
Sbjct: 648 KLIMKDCPSLIEVHQSIGDLKNIVLINLRDCKSLANLPREIYKLISVKTLILSGCSKIEK 707

Query: 620 LPE 622
           L E
Sbjct: 708 LEE 710



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 3/127 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L +     LK  P+ S   N+E L +K+  ++ E+  SIG+L  +V ++L +C 
Sbjct: 620 LGKLKILNVSHNKYLKITPDFSKLPNLEKLIMKDCPSLIEVHQSIGDLKNIVLINLRDCK 679

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L ++   +  L S++ L LSGC K+EKL E+I  +ESL  L  A    +++P S+ +  
Sbjct: 680 SLANLPREIYKLISVKTLILSGCSKIEKLEEDIMQMESLTALIAANTGIKQVPYSIARSK 739

Query: 605 KLSDLRL 611
            ++ + L
Sbjct: 740 SIAYISL 746


>gi|357487993|ref|XP_003614284.1| TMV resistance protein N [Medicago truncatula]
 gi|355515619|gb|AES97242.1| TMV resistance protein N [Medicago truncatula]
          Length = 1047

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 253/721 (35%), Positives = 378/721 (52%), Gaps = 110/721 (15%)

Query: 1   MASSSSSINMIPHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEI 58
           M+SSS       HP  +DVF+SFRG+D R+  VSHL AAL    + TF+DD KL +G  +
Sbjct: 1   MSSSSDD-----HPWTYDVFISFRGEDTRNTIVSHLYAALQNSGVYTFLDDQKLTKGEVL 55

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS---- 114
            P+L  AIE SKI IV+ S  YA S WCL ELV I++    YG+IV+PVFY V+PS    
Sbjct: 56  GPALRKAIEESKIFIVVLSPDYAGSSWCLRELVHIMDCHESYGRIVLPVFYGVEPSEVRK 115

Query: 115 ---DAGYCPSL------------------------GWMGIFDIPTSESVLIEGNVNDISK 147
              D G    L                        GW   ++I  +E  L+E  V DI +
Sbjct: 116 QSGDFGKALKLTATKREDQLLSMWKTALTKVGNLAGWD--YNIFRNEGELVELIVEDILR 173

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           KL D+      +  +G+ES +++I   +   S +   +GIWG+GG+GKTT A A+Y+ I 
Sbjct: 174 KL-DISLLSITEFPIGLESHVQQITKIIDDQSCKVCIIGIWGMGGLGKTTTAKALYNQIH 232

Query: 208 SHFEG-SYFMQNIRDESEKVGG-------------------LANIHLNFER--RRLSRMK 245
             F+G + F+++IR+  +   G                   + +I L   +   RL R K
Sbjct: 233 RRFQGRTSFLESIREVCDNNSGGVITLQEQLLLDLLEIKQKIHSIALGKTKIMTRLQRQK 292

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VL+V  D+T  +Q+  L         GS +IITTRD++LLK+ +   V HV+ + E+  +
Sbjct: 293 VLVVLDDVTKSEQLKALCANPKLLGSGSVLIITTRDLRLLKSFK---VDHVYTMTEMDKH 349

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
            SL LFS +AF Q +P   F ELS  V+ Y  G+PLAL+VLG YL   +E+EW  A+  L
Sbjct: 350 QSLELFSCHAFQQPNPRDKFSELSRNVVAYCKGLPLALEVLGCYLSERTEKEWRDALQIL 409

Query: 366 KRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           +++P+ D+Q++L++SYDGL+D  +Q+IFLD  CFF G ++  V   L+ C   A IGIS 
Sbjct: 410 EKIPNNDVQQILRISYDGLEDYTKQDIFLDICCFFIGKNRADVTEILNGCGLHADIGISI 469

Query: 425 LVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTS 481
           L+ +SLV +  NN + MHDLL++MG  I  + SIK+P K SRLW  +D+  VL     T 
Sbjct: 470 LIERSLVKVEKNNTLGMHDLLRDMGRSIAGESSIKEPAKHSRLWFHDDVNDVLLKKNGTE 529

Query: 482 LPTGI------------------NLDSLKELYLGGCSNLKRF--------------PEIS 509
           +  G+                  ++  L+ L L G   +  +              P   
Sbjct: 530 IVEGLIFELPITHRTRFGTNAFQDMKKLRLLKLDGVDLIGDYGLISKQLRWVDWQRPTFK 589

Query: 510 CNIEDLDLKETAIEELP-SSIGNL---SRLVD-LDLTNCSGLK--SVSSRLCNLKSLRRL 562
           C  +D DL    + EL  S+IG +    +L+D L + N S  K   ++     L +L +L
Sbjct: 590 CIPDDSDLGNLVVFELKHSNIGQVWQEPKLLDKLKILNVSHNKYLKITPDFSKLPNLEKL 649

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +  C  L ++ + IG+L+++  +NL + K    +P  + QL  +  L L  C +++ L 
Sbjct: 650 IMMECPSLIEVHQSIGDLKNIVLINLRDCKSLANLPREIYQLISVKTLILSGCSKIEKLE 709

Query: 622 E 622
           E
Sbjct: 710 E 710



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 3/118 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           LD LK L +     LK  P+ S   N+E L + E  ++ E+  SIG+L  +V ++L +C 
Sbjct: 620 LDKLKILNVSHNKYLKITPDFSKLPNLEKLIMMECPSLIEVHQSIGDLKNIVLINLRDCK 679

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
            L ++   +  L S++ L LSGC K+EKL E+I  +ESL  L  A    +++P S+ +
Sbjct: 680 SLANLPREIYQLISVKTLILSGCSKIEKLEEDIMQMESLTALIAANTGIKQVPYSIAR 737


>gi|357469145|ref|XP_003604857.1| NBS-LRR resistance protein [Medicago truncatula]
 gi|355505912|gb|AES87054.1| NBS-LRR resistance protein [Medicago truncatula]
          Length = 1684

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 263/728 (36%), Positives = 374/728 (51%), Gaps = 133/728 (18%)

Query: 7    SINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFI-DDKLNRGNEISPSLSS 64
            S N    PK +DVFLSFRG+D R  F+SHL ++L    I  F  DD++ RG+ IS SL  
Sbjct: 504  SSNNTDQPKMYDVFLSFRGEDNRAKFMSHLYSSLQNAGIYVFRDDDEIQRGDHISISLLR 563

Query: 65   AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGW 124
            AIE S+  IV+ S  YA+SRWC+ EL KI+E     G +VVPVFY V PS+  +    G 
Sbjct: 564  AIEQSRTCIVVLSTNYANSRWCMLELEKIMEIGRNRGLVVVPVFYEVAPSEVRH--QEGQ 621

Query: 125  MG-----------------------IFDI----------PTSESVLIEGNVNDISKKL-- 149
             G                       +FDI            +ES  I+  V  I++ L  
Sbjct: 622  FGKSFDDLISKNSVDESTKSNWKRELFDIGGIAGFVLIDSRNESADIKNIVEHITRLLDR 681

Query: 150  SDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
            ++LF +++    VGVES ++ +   L +  S +   +GIWG+GG+GKTT+A AIY+ I S
Sbjct: 682  TELFVAEHP---VGVESRVEAVTKLLNIQNSDDVLILGIWGMGGMGKTTLAKAIYNQIGS 738

Query: 209  HFEGSYFMQNIRDESEKVGGLANIH----------LNFERR-----------RLSRMKVL 247
             FEG  F+ NIR+  E      ++           L F+ R           +LS+ +VL
Sbjct: 739  KFEGRSFLLNIRELWETDTNQVSLQQKILDDVYKTLTFKIRDLESGKNMLKEKLSQNRVL 798

Query: 248  IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
            +VF D+ +L+Q+  L G  D F PGSR+IITTRD+ LL   R   V  ++ ++E+   +S
Sbjct: 799  LVFDDVNELEQLKALCGSRDWFGPGSRIIITTRDMHLL---RLCGVYQMYTIEEMDKIES 855

Query: 308  LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
            L LFS +AF Q  P   F   S  VI Y+ G+PLAL+VLGSYL      EW+  + KLK 
Sbjct: 856  LKLFSWHAFKQPSPKEDFATHSTDVIAYSGGLPLALEVLGSYLADCEITEWQYVLEKLKC 915

Query: 368  MPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
            +PH  +Q+ LKVS+ GL D  E+ IFLD ACFF G D+  V+  L+ C F A IGI  LV
Sbjct: 916  IPHDQVQEKLKVSFHGLKDFTEKQIFLDIACFFIGMDKKDVIQILNGCGFFADIGIKVLV 975

Query: 427  GKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLP 483
             ++LVT+ N NK+ MHDLL++MG +I+ +E+  DP KRSRLW   +++ +L +   T   
Sbjct: 976  ERALVTVDNRNKLRMHDLLRDMGRQIIYEEAPSDPEKRSRLWRHGEVFDILEKRKGTEAV 1035

Query: 484  TGINLD----------------SLKELYLGGCSNLKRFPEISCNIE-------------- 513
             G+ L+                 L+ L L G      F  +S +++              
Sbjct: 1036 KGLALEFPRKDCLETKAFKKMNKLRLLRLAGVKLKGDFKYLSGDLKWLYWHGFAEPCFPA 1095

Query: 514  --------DLDLKETAIEELPS--------SIGNLSRLVDLD---------------LTN 542
                     ++LK + +++L +         I NLS  +DL                L N
Sbjct: 1096 EFQQGSLVSVELKYSRLKQLWNKCQMLENLKILNLSHSLDLTETPDFSYLPNLEKLVLKN 1155

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF-EKIPSSMK 601
            C  L +VS  + +L  L  +NL GC  L KLP  I  L+SLE L L+     EK+   ++
Sbjct: 1156 CPSLSTVSHSIGSLHKLILINLRGCTGLRKLPRSIYKLKSLETLILSGCSMIEKLEEDLE 1215

Query: 602  QLSKLSDL 609
            Q+  L  L
Sbjct: 1216 QMESLITL 1223



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 163/491 (33%), Positives = 246/491 (50%), Gaps = 61/491 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREK-IETFIDDKLNRGNEISPSLSSAIEGSKISI 73
           +++VFLSF   D +  F+S L  AL  E  I  F D K  +  E   S+ + I+  K+++
Sbjct: 26  RYNVFLSFCAHD-KGYFLSSLEEALSLEAGINVFGDIKRFQHVE---SVLNVIQDCKVAV 81

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYL-VDPSDAG-------YCPSLGWM 125
           V+FS+ Y +S  C+ EL KI +       +V+PVFY  V P   G       +   L  +
Sbjct: 82  VLFSKNYTNSSSCIQELEKITQCCRTSDLVVLPVFYQGVGPFYHGDMFGGDTFHDFLDRI 141

Query: 126 GIFDIPTSESVLIE--GNVNDISKKLS--DLFPSD-NKDQLVGVESIIKEIES------- 173
            + +I   E  L+     +   +K L   DL P    + + V +   IK+I         
Sbjct: 142 SMEEISKEEDKLMTWVAAITKANKYLGSRDLIPKPIYRYEHVSITDYIKDIVEHITCVIN 201

Query: 174 ----------------------QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
                                 QLL  S     +GIWG+ GIGK+TIA AIY  I  +FE
Sbjct: 202 KNRDFCANSCTPSVKSGVQDVIQLLKQSKSPLIIGIWGMTGIGKSTIAQAIYDQIGLYFE 261

Query: 212 GSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD--GF 269
              F++++    E+       H     +     +VL+V  ++  L+Q+D+L  R     F
Sbjct: 262 HKSFLKDLGVLWEEQN-----HDQVLFKGHQHHRVLLVLDNIDKLEQLDVLGLRRSRKWF 316

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ-NHPAAGFLEL 328
             GS++IITTRD  LLK H    + H++ VKEL  ++SL +F+  AF Q   P   F EL
Sbjct: 317 GEGSKIIITTRDRHLLKKHG---IDHIYRVKELDESESLKVFNLAAFSQATTPQEDFSEL 373

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM--PHMDIQKVLKVSYDGLDD 386
           S  ++ Y+ G+PLAL+ LG +L G    +W++ +  LKR+  P   +Q+ L+ S+  L D
Sbjct: 374 SRQLVAYSRGLPLALKELGFFLNGEEALKWKNVLKSLKRLSIPAPRLQEALEKSFSDLSD 433

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQ 445
           EE+ IFLD AC F G +   V   L+    SA + IS L  KS +TI  NNK+ +H LLQ
Sbjct: 434 EEKRIFLDIACLFVGMNLNDVKQILNRSTQSAALEISNLEDKSFLTIDENNKLGIHVLLQ 493

Query: 446 EMGGEIVRQES 456
            M  +I++++S
Sbjct: 494 AMARDIIKRKS 504



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 3/122 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
            L++LK L L    +L   P+ S   N+E L LK   ++  +  SIG+L +L+ ++L  C+
Sbjct: 1122 LENLKILNLSHSLDLTETPDFSYLPNLEKLVLKNCPSLSTVSHSIGSLHKLILINLRGCT 1181

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            GL+ +   +  LKSL  L LSGC  +EKL E++  +ESL  L   +    K+P S+ ++ 
Sbjct: 1182 GLRKLPRSIYKLKSLETLILSGCSMIEKLEEDLEQMESLITLIADKTAITKVPFSIVRMK 1241

Query: 605  KL 606
             +
Sbjct: 1242 SI 1243


>gi|342365839|gb|AEL30372.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1061

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 254/712 (35%), Positives = 349/712 (49%), Gaps = 111/712 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG+D R     HL A+L R  I  F DD  L RG  IS  L  AIE S  ++V
Sbjct: 21  YHVFLSFRGQDTRKGVTDHLYASLQRNGITAFRDDMNLERGEVISHELLRAIEESMFAVV 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           + S  YASS WCL+EL KI+E KN  G  +VPVFY VDP D  +                
Sbjct: 81  VLSPNYASSAWCLDELQKIVECKNNLGLQIVPVFYGVDPCDVRHQKGTFEDAFRKQEERF 140

Query: 119 --------------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                              + G       E+ L+E     +  +L    PS   + L G+
Sbjct: 141 GGDSEKVKRWREALIQVASYSGWDSKNQHEATLVESIAQHVHTRLIPKLPS-CIENLFGM 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
            S ++++ + +  G ++    GIWG+GG+GKTTIA AIY  I   F+ S F+ NIRD  E
Sbjct: 200 ASRVEDVTTLMCIGLSDVRFTGIWGMGGVGKTTIARAIYEAIEDQFQISCFLANIRDTCE 259

Query: 225 KVGGLA-------NIH------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
             G L        +IH            +   R  L   KVLIV  D+ D+ Q++ L G 
Sbjct: 260 TNGILQLQKILGEHIHVSRCTFSNLYDGMRIIRNSLCNKKVLIVLDDVNDVSQLENLAGN 319

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F PGSRV+ITTRD+ LLK H    V   +EV+ L   ++L  F   AF ++ P  G+
Sbjct: 320 QDWFGPGSRVMITTRDMHLLKTHE---VCDTYEVECLDKTEALRFFCSKAFKRDVPEEGY 376

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
           LE+S+ V+KY  G+PLAL+VLGSYL G +   W SAV KL+ +    I + L++SYDGLD
Sbjct: 377 LEMSHEVVKYTGGLPLALKVLGSYLYGRNISAWRSAVKKLRSVSDAKILETLRISYDGLD 436

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN---------N 436
             ++ IFLD ACFFKG  +  V++  +   ++ +I I  L+ +SLVT+           +
Sbjct: 437 SMQKEIFLDIACFFKGKPKDKVLDLFEKRGYNPQIDIDVLIERSLVTVKQDIDVFKKKFD 496

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL---------PTG-- 485
            + MHDLLQEMG   V QES   P KRSRLW PED+  +L +N            P G  
Sbjct: 497 VLEMHDLLQEMGRNFVIQESPNYPSKRSRLWSPEDLDLMLTQNKGTETIQSIVLPPIGNG 556

Query: 486 --------------------INLDSLK-ELYLGGCSNLKRFPEISCNIEDLDLKETAIE- 523
                               +N D ++  +++   S LK      C +E L L +   E 
Sbjct: 557 TYYVESWRDKAFPNMSQLKFLNFDFVRAHIHINIPSTLKVLHWELCPLETLPLVDQRYEL 616

Query: 524 -ELPSSIGN----------LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            E+  S  N          L +L  LDL+ CSGL+  +  L  +  L  L+LS C  L  
Sbjct: 617 VEIKISWSNIVQLWHGFKFLEKLKHLDLS-CSGLEQ-TPDLSGVPVLETLDLSCCHCLTL 674

Query: 573 LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +   +   +SL  LNL E    E  P  + ++S L +L L +CK   S PE 
Sbjct: 675 IHPSLICHKSLLVLNLWECTSLETFPGKL-EMSSLKELNLCDCKSFMSPPEF 725



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 88/198 (44%), Gaps = 32/198 (16%)

Query: 476 LNENTSL---PTGINLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSI 529
           L E TSL   P  + + SLKEL L  C +    PE       +  L  ++ AI ELP S+
Sbjct: 690 LWECTSLETFPGKLEMSSLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDMAISELPISL 749

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL------------------- 570
           G L  L +LDL  C  L  +   +  L+SLR L  S C  L                   
Sbjct: 750 GCLVGLSELDLRGCKKLTCLPDSIHELESLRILRASSCSSLCDLPHSVSVIPFLSILDLR 809

Query: 571 ------EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                 E  P + G   SL  L+L+   F  +P S+ +L KL  L L  CKRLQSLPELP
Sbjct: 810 DCCLTEESFPCDFGQFPSLTDLDLSGNHFVNLPISIHELPKLKCLSLNGCKRLQSLPELP 869

Query: 625 CG-SSIHARHCTSLKTLS 641
                + A  C SL T S
Sbjct: 870 SSIRELKAWCCDSLDTRS 887



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 30/164 (18%)

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           ++ LDL  + +E+ P  +  +  L  LDL+ C  L  +   L   KSL  LNL  C  LE
Sbjct: 639 LKHLDLSCSGLEQTPD-LSGVPVLETLDLSCCHCLTLIHPSLICHKSLLVLNLWECTSLE 697

Query: 572 KLPEEIGNLESLEYLNLAE-KDF-----------------------EKIPSSMKQLSKLS 607
             P ++  + SL+ LNL + K F                        ++P S+  L  LS
Sbjct: 698 TFPGKL-EMSSLKELNLCDCKSFMSPPEFGECMTKLSRLSFQDMAISELPISLGCLVGLS 756

Query: 608 DLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLL 647
           +L L+ CK+L  LP    EL     + A  C+SL  L +S +++
Sbjct: 757 ELDLRGCKKLTCLPDSIHELESLRILRASSCSSLCDLPHSVSVI 800


>gi|224131066|ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838160|gb|EEE76525.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1176

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 262/706 (37%), Positives = 374/706 (52%), Gaps = 96/706 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF+SFRG D R++F SHL  AL R++I+ +IDDKL+ G +I P++   IE S IS V
Sbjct: 2   KHDVFISFRGTDTRYSFTSHLYDALQRKQIDAYIDDKLDGGEKIEPAILERIEESFISAV 61

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           IFSE YA S +CL EL KILE      Q+V+PVFY +DP         Y  +L       
Sbjct: 62  IFSENYADSTFCLRELSKILECMETKQQMVLPVFYRLDPCQVQNLTGSYGDALCKHEKDC 121

Query: 123 -------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                              GW    ++   E+ LI+  V+DI KKL+   PS + ++LVG
Sbjct: 122 GSKEVESWRHASKEIANLKGWNS--NVIKDETKLIQEIVSDIQKKLNHA-PSIDAERLVG 178

Query: 164 VESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           +ES +++IES L  GST     VGIWG+ GIGK+T A A+Y    S FEG  F QN+R+E
Sbjct: 179 MESRVEDIESLLSFGSTGTVLIVGIWGMCGIGKSTTAEAVYHRNCSKFEGHCFFQNVREE 238

Query: 223 SEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDV 282
           S+K G         + R L R KVLIV  D+ D + +  L+G    F  GSR+I+T+RD 
Sbjct: 239 SKKHG--------IDHRMLQRKKVLIVLDDVNDPQVLKYLVGEDGLFGQGSRIIVTSRDR 290

Query: 283 QLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLA 342
           Q+L N        ++EVK L  +D+L LFS +AF QN+P  G++ LS  V+    G+PL 
Sbjct: 291 QVLIN--ACDEDKIYEVKILDKDDALRLFSLHAFKQNNPIEGYIGLSKTVVSCVKGIPLV 348

Query: 343 LQVLG-SYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKG 401
           L+VLG S     S E WES V +L+     DI+K L++ Y  LD  ++ IFLD ACFF  
Sbjct: 349 LEVLGASVYSKRSVEYWESKVAQLRTNGGEDIKKCLEMCYHELDQTQKKIFLDIACFFGR 408

Query: 402 NDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPG 461
             + L+   LD      + GI RL+   L+ I  NKI MHD+L ++G +IV QE + DP 
Sbjct: 409 CKRDLLQQTLD---LEERSGIDRLIDMCLIKIVQNKIWMHDMLLKLGKKIVLQEHV-DPR 464

Query: 462 KRSRLWHPEDIYQVL-NENTSLPTGINLDSL---KELYLG-----GCSNLK--------- 503
           +RSRLW  +D+ +VL  + T     I L+ L   KE+ L      G SNL+         
Sbjct: 465 ERSRLWKADDVNRVLTTQGTRKVESIILNLLAITKEMILSPTAFEGMSNLRLLKFYYPPF 524

Query: 504 -----------------RFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
                              P+    +S  +  L      ++ LPS+     +LV+  + +
Sbjct: 525 FGDPSKEKIMNRRRVRIHLPQGLHFLSNELRILHWYNYPLKSLPSNFCP-EKLVEFHM-H 582

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMK 601
           CS L+ + +    LK+L+ +NL    KL     ++    +LE LNL + +    +PSS+K
Sbjct: 583 CSQLEQLWNEFQPLKNLKVMNLRSSSKLSLSDSDLSKFPNLEVLNLGQCRGLAGLPSSIK 642

Query: 602 QLSKLSDLRLQNCKRLQSLP-ELPCGSS---IHARHCTSLKTLSNS 643
             ++L++L L  C  L +LP  + C S    +    C SL +L +S
Sbjct: 643 YSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCRSLASLPDS 688



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 108/225 (48%), Gaps = 45/225 (20%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA----IEELPSSIGNLSR 534
            TSLP  I  L  L +L L   S L   P+    ++ L L   +    +  LP+SIG L  
Sbjct: 779  TSLPNSIGKLKCLVKLNLSYFSKLASLPDCFGELKSLVLLHISFCPKLVSLPNSIGQLKC 838

Query: 535  LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK---------------------- 572
            L +L+L+ CS L ++ + +  L+SL+ +NL  C  L K                      
Sbjct: 839  LAELNLSGCSELANLPNSIYYLESLKWINLERCYMLNKSPVLNPRCSEVEEIAFGGCLQY 898

Query: 573  ----------LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                      +P  IG+L SL  L L+  DFE+IP+++KQL  L  L L  C+RLQ LPE
Sbjct: 899  LNLGASGVSEIPGSIGSLVSLRDLRLSCNDFERIPANIKQLPMLIKLDLHGCERLQHLPE 958

Query: 623  LPCGSSI-HARHCTSLKTLSNSSTLLTRSSKHWDI----FNFSNC 662
            LP    +  A +C SL++L   +++  +  K +      FNFSNC
Sbjct: 959  LPSSLQVLMASYCISLRSL---ASIFIQGGKEYAAASQQFNFSNC 1000



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 89/174 (51%), Gaps = 10/174 (5%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFP----EISCNIEDLDLKETAIEELPSSIGNLSR 534
            SLP  I  L SL++LYL  CS L   P    E+ C ++   ++ + +  LP +IG L  
Sbjct: 683 ASLPDSIGELKSLEDLYLYFCSKLASLPNSFRELKCLVKLNLIRCSELVSLPDNIGELKS 742

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           LV+L L +CS L+S+ + +  LK L  L LS   KL  LP  IG L+ L  LNL+     
Sbjct: 743 LVELKLFSCSKLESLPNSIGGLKCLAELCLSNFSKLTSLPNSIGKLKCLVKLNLSYFSKL 802

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
             +P    +L  L  L +  C +L SLP    +L C + ++   C+ L  L NS
Sbjct: 803 ASLPDCFGELKSLVLLHISFCPKLVSLPNSIGQLKCLAELNLSGCSELANLPNS 856



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 6/148 (4%)

Query: 480 TSLPTGINLDS-LKELYLGGCSNLKRFPE-ISCNIEDLDLKET---AIEELPSSIGNLSR 534
             LP+ I   + L EL L  C +L   P  I C  + + LK     ++  LP SIG L  
Sbjct: 635 AGLPSSIKYSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCRSLASLPDSIGELKS 694

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDF 593
           L DL L  CS L S+ +    LK L +LNL  C +L  LP+ IG L+SL  L L +    
Sbjct: 695 LEDLYLYFCSKLASLPNSFRELKCLVKLNLIRCSELVSLPDNIGELKSLVELKLFSCSKL 754

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           E +P+S+  L  L++L L N  +L SLP
Sbjct: 755 ESLPNSIGGLKCLAELCLSNFSKLTSLP 782



 Score = 45.8 bits (107), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA-EKDFEKI 596
           L+L  C GL  + S +     L  L L  C  L  LP  IG L  L  L L   +    +
Sbjct: 626 LNLGQCRGLAGLPSSIKYSTRLTELILYRCDSLSTLPSSIGCLSQLVKLKLIFCRSLASL 685

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
           P S+ +L  L DL L  C +L SLP    EL C   ++   C+ L +L ++
Sbjct: 686 PDSIGELKSLEDLYLYFCSKLASLPNSFRELKCLVKLNLIRCSELVSLPDN 736


>gi|46577339|sp|Q40392.1|TMVRN_NICGU RecName: Full=TMV resistance protein N
 gi|558887|gb|AAA50763.1| N [Nicotiana glutinosa]
          Length = 1144

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 247/704 (35%), Positives = 376/704 (53%), Gaps = 90/704 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F SHL   L  + I+TF DDK L  G  I   L  AIE S+ +IV
Sbjct: 12  YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           +FSE YA+SRWCLNELVKI+E K ++ Q V+P+FY VDPS                +  Y
Sbjct: 72  VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131

Query: 119 CPSLGWMGIFDIPTSESVLIEGN---------------VNDISKKLSDLFPSDNKDQLVG 163
              +  +  + I  +E+  ++G+               V+ IS KL  +  S  ++ +VG
Sbjct: 132 KDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQN-IVG 190

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI------SSHFEGSYFMQ 217
           +++ +++IES L  G      +GIWG+GG+GKTTIA AI+  +      S  F+G+ F++
Sbjct: 191 IDTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLK 250

Query: 218 NIRDESEKVGGLANIHLNFERR-----------------RLSRMKVLIVFYDLTDLKQ-I 259
           +I++    +  L N  L+   R                 RL   KVLIV  D+ +    +
Sbjct: 251 DIKENKRGMHSLQNALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHYL 310

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G LD F  GSR+IITTRD  L++ +       ++EV  L  ++S+ LF ++AFG+ 
Sbjct: 311 EYLAGDLDWFGNGSRIIITTRDKHLIEKN-----DIIYEVTALPDHESIQLFKQHAFGKE 365

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P   F +LS  V+ YA G+PLAL+V GS L  +   EW+SA+  +K   +  I   LK+
Sbjct: 366 VPNENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKI 425

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKI 438
           SYDGL+ ++Q +FLD ACF +G ++  ++  L++C   A+ G+  L+ KSLV IS  N++
Sbjct: 426 SYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQV 485

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------------------ 480
            MHDL+Q+MG  IV  +  KDPG+RSRLW  +++ +V++ NT                  
Sbjct: 486 QMHDLIQDMGKYIVNFQ--KDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVSSYSSTLR 543

Query: 481 -SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            S     N+  L+   +G  S       +  N+          E  PS+   L  LV L 
Sbjct: 544 FSNQAVKNMKRLRVFNMGRSSTHYAIDYLPNNLRCFVCTNYPWESFPSTF-ELKMLVHLQ 602

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
           L + S L+ + +   +L SLRR++LS   +L + P+  G + +LEY+NL +  + E++  
Sbjct: 603 LRHNS-LRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTG-MPNLEYVNLYQCSNLEEVHH 660

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
           S+   SK+  L L +CK L+  P +   S   +  R C SL+ L
Sbjct: 661 SLGCCSKVIGLYLNDCKSLKRFPCVNVESLEYLGLRSCDSLEKL 704



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 87/155 (56%), Gaps = 13/155 (8%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRL 535
            +LP+ I  L SL  L + GCS L+  PE   ++++L   D  +T I   PSSI  L++L
Sbjct: 750 VALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKL 809

Query: 536 VDLDLTNCSGLK-----SVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLA 589
           + L      G K             L SL  LNLS C  ++  LPEEIG+L SL+ L+L+
Sbjct: 810 IILMF---RGFKDGVHFEFPPVAEGLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKKLDLS 866

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             +FE +PSS+ QL  L  L L++C+RL  LPELP
Sbjct: 867 RNNFEHLPSSIAQLGALQSLDLKDCQRLTQLPELP 901



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 4/150 (2%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNL-SRLVDLDLT 541
           +N++SL+ L L  C +L++ PEI   ++    + ++ + I ELPSSI    + +  L L 
Sbjct: 685 VNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLW 744

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           N   L ++ S +C LKSL  L++SGC KLE LPEEIG+L++L   + ++    + PSS+ 
Sbjct: 745 NMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSII 804

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
           +L+KL  L  +  K        P    +H+
Sbjct: 805 RLNKLIILMFRGFKDGVHFEFPPVAEGLHS 834


>gi|45544513|dbj|BAD12594.1| N protein [Nicotiana tabacum]
          Length = 1128

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 247/704 (35%), Positives = 376/704 (53%), Gaps = 90/704 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F SHL   L  + I+TF DDK L  G  I   L  AIE S+ +IV
Sbjct: 4   YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 63

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           +FSE YA+SRWCLNELVKI+E K ++ Q V+P+FY VDPS                +  Y
Sbjct: 64  VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 123

Query: 119 CPSLGWMGIFDIPTSESVLIEGN---------------VNDISKKLSDLFPSDNKDQLVG 163
              +  +  + I  +E+  ++G+               V+ IS KL  +  S  ++ +VG
Sbjct: 124 KDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQN-IVG 182

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI------SSHFEGSYFMQ 217
           +++ +++IES L  G      +GIWG+GG+GKTTIA AI+  +      S  F+G+ F++
Sbjct: 183 IDTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLK 242

Query: 218 NIRDESEKVGGLANIHLNFERR-----------------RLSRMKVLIVFYDLTDLKQ-I 259
           +I++    +  L N  L+   R                 RL   KVLIV  D+ +    +
Sbjct: 243 DIKENKRGMHSLQNALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHYL 302

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G LD F  GSR+IITTRD  L++ +       ++EV  L  ++S+ LF ++AFG+ 
Sbjct: 303 EYLAGDLDWFGNGSRIIITTRDKHLIEKN-----DIIYEVTALPDHESIQLFKQHAFGKE 357

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P   F +LS  V+ YA G+PLAL+V GS L  +   EW+SA+  +K   +  I   LK+
Sbjct: 358 VPNENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKI 417

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKI 438
           SYDGL+ ++Q +FLD ACF +G ++  ++  L++C   A+ G+  L+ KSLV IS  N++
Sbjct: 418 SYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQV 477

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------------------ 480
            MHDL+Q+MG  IV  +  KDPG+RSRLW  +++ +V++ NT                  
Sbjct: 478 QMHDLIQDMGKYIVNFQ--KDPGERSRLWLAKEVEEVMSNNTGTMAMEAIWVSSYSSTLR 535

Query: 481 -SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            S     N+  L+   +G  S       +  N+          E  PS+   L  LV L 
Sbjct: 536 FSNQAVKNMKRLRVFNMGRSSTHYAIDYLPNNLRCFVCTNYPWESFPSTF-ELKMLVHLQ 594

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
           L + S L+ + +   +L SLRR++LS   +L + P+  G + +LEY+NL +  + E++  
Sbjct: 595 LRHNS-LRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTG-MPNLEYVNLYQCSNLEEVHH 652

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
           S+   SK+  L L +CK L+  P +   S   +  R C SL+ L
Sbjct: 653 SLGCCSKVIGLYLNDCKSLKRFPCVNVESLEYLGLRSCDSLEKL 696



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 87/155 (56%), Gaps = 13/155 (8%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRL 535
            +LP+ I  L SL  L + GCS L+  PE   ++++L   D  +T I   PSSI  L++L
Sbjct: 742 VALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKL 801

Query: 536 VDLDLTNCSGLK-----SVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLA 589
           + L      G K             L SL  LNLS C  ++  LPE+IG+L SL+ L+L+
Sbjct: 802 IILMF---RGFKDGVHFEFPPVAEGLHSLEYLNLSYCNLIDGGLPEDIGSLSSLKKLDLS 858

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             +FE +PSS+ QL  L  L L++C+RL  LPELP
Sbjct: 859 RNNFEHLPSSIAQLGALQSLDLKDCQRLTQLPELP 893



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 4/150 (2%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNL-SRLVDLDLT 541
           +N++SL+ L L  C +L++ PEI   ++    + ++ + I ELPSSI    + +  L L 
Sbjct: 677 VNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLW 736

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           N   L ++ S +C LKSL  L++SGC KLE LPEEIG+L++L   + ++    + PSS+ 
Sbjct: 737 NMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSII 796

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
           +L+KL  L  +  K        P    +H+
Sbjct: 797 RLNKLIILMFRGFKDGVHFEFPPVAEGLHS 826


>gi|357469143|ref|XP_003604856.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505911|gb|AES87053.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 2019

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 264/739 (35%), Positives = 371/739 (50%), Gaps = 110/739 (14%)

Query: 5    SSSINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
            S +  M   PK +DVFLSFRG+D R  F+SHL+++L    I  F DD K+ RG++IS SL
Sbjct: 475  SETSQMHRQPKMYDVFLSFRGEDSRAKFISHLHSSLENAGIHVFKDDFKIQRGDQISISL 534

Query: 63   SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL 122
              AI  S+I IV+ S+ YA+SRWC+ EL  I+E     G +VVPVFY VDPS+  +    
Sbjct: 535  FRAIGQSRICIVVLSKNYANSRWCMLELENIMEIGRNRGLVVVPVFYEVDPSEVRHQKGH 594

Query: 123  GWMGIFDIPTSESV----------------LIEGN----VNDISKKLSDLFPSDN---KD 159
               G  D+ +  SV                 I GN    VN I   ++ L         +
Sbjct: 595  FGKGFDDLISKTSVDESTKSNWRRELFDICGISGNESADVNSIVSHVTRLLDRTQLFVAE 654

Query: 160  QLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
              VGVES ++     L +  S +   +GIWG+G   KTTIA +IY+ I S F+G  F+ N
Sbjct: 655  HPVGVESRVQAATKLLKIQKSEDVLLLGIWGMG---KTTIAKSIYNEIGSKFDGKSFLLN 711

Query: 219  IRDESEKVGGLANIHL-----------------------NFERRRLSRMKVLIVFYDLTD 255
            IR+  E   G   + L                       N  + RLS  +VL+V  D+ +
Sbjct: 712  IREFWET--GTNQVSLQQQVLCDVYKTTSFKIRDIESGKNTLKERLSDNRVLLVLDDVNE 769

Query: 256  LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
            L QI  L G    F PGSR+IITTRD++LL   R  RV  V+E+KE+   +SL LFS +A
Sbjct: 770  LDQIKALCGSRKWFGPGSRIIITTRDMRLL---RSCRVDQVYEIKEMDEIESLELFSWHA 826

Query: 316  FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
            F Q  P   F      ++ Y+   PLAL+VLGSYL G    EW+  + KLK +PH ++QK
Sbjct: 827  FKQPSPIEDFATHLTDMVAYSGRFPLALEVLGSYLSGCKITEWQKVLEKLKCIPHDEVQK 886

Query: 376  VLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
             LKVS+DGL D  ++ IFLD ACFF G D+   +  L+ CRF A IGI  LV +SLVT+ 
Sbjct: 887  KLKVSFDGLKDVTDKQIFLDIACFFIGMDKNDAIQILNGCRFFADIGIKVLVERSLVTVD 946

Query: 435  N-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI----- 486
            N NK+ MHDLL++MG +I+ +ES  DP  RSRLW  ED   VL+++  T+   G+     
Sbjct: 947  NRNKLRMHDLLRDMGRQIIYEESPFDPENRSRLWRREDALDVLSKHKGTNAVKGLVLEFP 1006

Query: 487  -------------NLDSLKELYLGGCSNLKRFPEISCNIEDL------------------ 515
                          ++ L+ L LGG      F  +S  +  L                  
Sbjct: 1007 IKNKVCLNTKAFKKMNKLRLLRLGGVKLNGDFKYLSEELRWLCWHGFPSTYTPAEFQQGS 1066

Query: 516  ----DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
                +LK + ++++      L  L  L+L++   L   +     + +L ++ L GC  L 
Sbjct: 1067 LVVVELKYSNLKQIWKKCKMLENLKILNLSHSLNLTE-TPDFSYMPNLEKIVLKGCPSLS 1125

Query: 572  KLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH 630
             +   IG+L  L  +NL +     K+P S+ +L  L  L L  C ++  L E        
Sbjct: 1126 TVSHSIGSLHKLLLINLTDCTGLRKLPKSIYKLKSLETLILSGCSKINKLEE-------D 1178

Query: 631  ARHCTSLKTLSNSSTLLTR 649
                 SLKTL    T +T+
Sbjct: 1179 LEQMESLKTLIADKTAITK 1197



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 217/465 (46%), Gaps = 86/465 (18%)

Query: 56   NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPS 114
             E+  S+ + I  SK+ +VI S+ Y  SRWCL EL KI +  + K G +V+PVFY     
Sbjct: 1555 QEVPTSVLNVIADSKVVVVILSKNYTHSRWCLQELEKITQCYRTKDGPVVLPVFY----- 1609

Query: 115  DAGYCPS---------------LGWMGIFDIPTSES-----VLIEGNVNDISKKLSDLF- 153
            D  + PS               L  + + +  +SE        +    N+ SK  +  F 
Sbjct: 1610 DGVHSPSRILQEDMYGEAFHDFLDRISMKEKTSSEDEDKFMSWVAEISNEASKYAALAFL 1669

Query: 154  ---PSDNKDQLVG------------------VESIIKEIES--QLLSGSTEFNTVGIWGI 190
               P+ N+ + +                   +ESI    +   QLL  S     VGIWG+
Sbjct: 1670 RYGPNQNRGEHITHVVKCATLIVSKKRASFHIESIHSRAQDVIQLLKQSKCPLLVGIWGM 1729

Query: 191  GGIGKTTIASAIYSNISSHFEGSYFMQNIRDE-SEKVGGLANIH---------------- 233
             GIGK+TIA+ IY      F+G   ++ I     +K+ GL ++                 
Sbjct: 1730 TGIGKSTIANVIYHKFGPFFQGFCLLKTISGICKKKIHGLTSLQESLAEFYSNKLSIESG 1789

Query: 234  LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
             N  +R     +VLIV  D+  L Q+ +L G    F  GS++IITTRD +LLK H    V
Sbjct: 1790 KNIIKRSFQHKRVLIVLDDVDKLDQLKVLCGSRYWFGAGSKIIITTRDRRLLKQHG---V 1846

Query: 294  GHVFEVKELSYNDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
             H++ VKEL+  +SL L +   +    +    F E S  ++  + G+PL   VL S L+ 
Sbjct: 1847 DHIYSVKELNERESLALLNWGGYSLPTNTQQYFGEPSRELVTNSWGLPLCKNVLKS-LER 1905

Query: 353  MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            +S             +P   +Q+ L+ S+  L DEE+ +FLD ACFF G  Q  V   L+
Sbjct: 1906 LS-------------IPAPRLQEALEKSFRDLSDEEKQVFLDIACFFVGKKQNDVQQILN 1952

Query: 413  ACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQES 456
              +    + IS L  KSL+TI  +NKI MH +LQ M   I+++ES
Sbjct: 1953 KSKQYVALQISLLEDKSLITIDEDNKIQMHVMLQAMARGIIKRES 1997



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 153/291 (52%), Gaps = 28/291 (9%)

Query: 174 QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ-----NIRDESEKVGG 228
           QLL  S     +GIWG+ GIGKTTIA AIY  I  +F   +F+Q     +I   +E    
Sbjct: 207 QLLKQSKSPLLIGIWGMAGIGKTTIAQAIYHQIGPYFADKFFLQQKLIFDIDQGTEIKIR 266

Query: 229 LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
                    + R    ++L+V  ++  L+Q++ L    + F  GS++IIT+R+  LLK H
Sbjct: 267 KIESGKQILKYRFRHKRILLVLDNVDKLEQLNALCENPEWFGVGSKIIITSRNRHLLKEH 326

Query: 289 RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
                 H++ VKEL  ++SL LF+   +G              V+ Y+ G P AL+ +G+
Sbjct: 327 ---GFDHIYRVKELDGSESLELFN---YG--------------VVAYSGGWPPALKEVGN 366

Query: 349 YLKGMSEEEWESAVNKLKR--MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYL 406
           +L G    +W+  + + +   +P  +I + L++S++ L DEE++IFLD A F  G +Q  
Sbjct: 367 FLHGKELHKWKDVLRRYQTFDLPSPEILEDLEMSFNDLSDEEKHIFLDIAYFCIGMNQND 426

Query: 407 VMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQES 456
           V+  L+     A + I+ L  KS +TI   N + M  +LQ M  +I++ E+
Sbjct: 427 VLQTLNRSTQCAALQINLLEDKSFLTIDKKNNLEMQVVLQAMAKDIIKSET 477



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 3/122 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
            L++LK L L    NL   P+ S   N+E + LK   ++  +  SIG+L +L+ ++LT+C+
Sbjct: 1087 LENLKILNLSHSLNLTETPDFSYMPNLEKIVLKGCPSLSTVSHSIGSLHKLLLINLTDCT 1146

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            GL+ +   +  LKSL  L LSGC K+ KL E++  +ESL+ L   +    K+P S+ +L 
Sbjct: 1147 GLRKLPKSIYKLKSLETLILSGCSKINKLEEDLEQMESLKTLIADKTAITKVPFSIVRLK 1206

Query: 605  KL 606
             +
Sbjct: 1207 SI 1208


>gi|105922849|gb|ABF81440.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1228

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 249/720 (34%), Positives = 378/720 (52%), Gaps = 128/720 (17%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRGKD R+NF SHL + L +  I+ ++DD +L RG  I  +L  A+E S+
Sbjct: 95  PQYMYDVFLSFRGKDTRNNFTSHLYSNLAQRGIDVYMDDSELERGKTIETALWKAVEESR 154

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY------------ 118
            S++IFS  YASS WCL+ELVKI++   + GQ V+PVFY VDPS+               
Sbjct: 155 FSVIIFSRDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEVAKRKGQYEKAFVEH 214

Query: 119 ----------------CPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDN 157
                           C S      GW  I +   SES+ I   V  I  KLS   P+ +
Sbjct: 215 EQNFKENLEKVRNWKDCLSTVANLSGW-DIRNRNESESIKI--IVEYIFYKLSVTLPTIS 271

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
           K +LVG++S ++ +   +   + E   +GI G+GGIGKTT+A  +Y  I   FEGS F+ 
Sbjct: 272 K-KLVGIDSRLEVLNGYIDEETGEAIFIGICGMGGIGKTTVARVVYDRIRWQFEGSCFLA 330

Query: 218 NIRDE---------------SEKVGGLANI-----HLNFERRRLSRMKVLIVFYDLTDLK 257
           N+R+                SE +   ANI      +   +RRL R K+L+V  D+ D K
Sbjct: 331 NVREAFAEKDGRRHLQEQLLSEILMERANICDSSRGIEMIKRRLQRKKILVVLDDVDDHK 390

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++ L      F PGSR+IIT+RD Q+L  +    V  ++E ++L+ +D+LTLFS+ A  
Sbjct: 391 QLESLAAESKWFGPGSRIIITSRDKQVLTRNG---VARIYEAEKLNDDDALTLFSQKALK 447

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
            + PA  F+ELS  V+ YANG+PLAL+V+GS++ G S  EW SA+N+L  +P  +I  +L
Sbjct: 448 NDQPAEDFVELSKQVVGYANGLPLALEVIGSFMHGRSILEWGSAINRLNDIPDREIIDML 507

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           ++ +DGL + E+ IFLD ACF KG  +  ++  LD+C F A IG   L+ KSL+++S ++
Sbjct: 508 RIGFDGLHELEKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSRDQ 567

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWH-----------------------PEDIYQ 474
                     G E +    +  PG +  LW+                       PED+  
Sbjct: 568 ----------GKETIEAIFLDMPGIKEALWNMKAFSKMTKLRLLKIDNVQLSEGPEDLSN 617

Query: 475 VLN-------ENTSLPTGINLDSLKELYLGGCS-----------------------NLKR 504
            L         + SLP G+ +D L EL++   S                       NL +
Sbjct: 618 KLRFLEWNSYPSKSLPAGLQVDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLSK 677

Query: 505 FPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
            P+++   N+E L ++  T++ E+  S+ +  +L  ++L NC  ++ + + L  ++SL+ 
Sbjct: 678 TPDLTGIPNLESLIIEGCTSLSEVHPSLAHHKKLQYMNLVNCKSIRILPNNL-EMESLKI 736

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             L GC KLEK P+ +GN+  L  L L E    ++ SS++ L  L  L + +CK L+S+P
Sbjct: 737 CTLDGCSKLEKFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLLSMNSCKNLESIP 796



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 70/106 (66%), Gaps = 3/106 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SLK   L GCS L++FP+I  N+ +L    L ET I EL SSI +L  L  L
Sbjct: 725 LPNNLEMESLKICTLDGCSKLEKFPDIVGNMNELMVLRLDETGITELSSSIRHLIGLGLL 784

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE
Sbjct: 785 SMNSCKNLESIPSSIGFLKSLKKLDLSGCSELKYIPENLGKVESLE 830



 Score = 42.4 bits (98), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 15   KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
            K +VF   R  D   N VS+L +   R  I   ++ +  +   I   L  AIE S +SI+
Sbjct: 1003 KANVFPGIRVTDT-SNGVSYLKSDRSRRFI-IPVEKEPEKVMAIRSRLFEAIEESGLSII 1060

Query: 75   IFSEGYASSRWCLNELVKILESKNKYG-QIVVPVFYLVDPS 114
            IFS   AS  WC  ELVKI+   ++     V PV Y V+ S
Sbjct: 1061 IFSRDCASLPWCFGELVKIVGFMDEMRLDTVFPVSYDVEQS 1101


>gi|15234388|ref|NP_192938.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|4586106|emb|CAB40942.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|7267902|emb|CAB78244.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|332657683|gb|AEE83083.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 275/787 (34%), Positives = 389/787 (49%), Gaps = 145/787 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           M SSS S       + DVFLSFRG D R+NF  HL  AL    I++FIDD+L RG+ ++ 
Sbjct: 1   MESSSPS-----SAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLT- 54

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L   IE SKI+I++FS  YA+S WCL ELVKILE +N   Q+VVP+FY VD SD     
Sbjct: 55  ALFDRIEKSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQR 114

Query: 117 ---------------GYCPS---------------LGWMGIFDIPTSESVLIEGNVNDIS 146
                          G  P                LG++ + +I TSE+ L++    D  
Sbjct: 115 NSFAVPFKLPELTFPGVTPEEISSWKAALASASNILGYV-VKEISTSEAKLVDEIAVDTF 173

Query: 147 KKLSDLFPSDNKDQLVGVESIIKEIESQLLSGS--TEFNTVGIWGIGGIGKTTIASAIYS 204
           KKL+DL PS N + LVG+ES +K +E +LLS       + +GI G+ GIGKTT+A  +Y 
Sbjct: 174 KKLNDLAPSGN-EGLVGIESRLKNLE-KLLSWEDLDTVHIIGIVGMVGIGKTTLADCLYG 231

Query: 205 NISSHFEGSYFMQNIRDESEK---------------------VGGLANIHLNFERRRLSR 243
            +   F+GS F+ NIR+ S +                     +G   N H  FE RRL  
Sbjct: 232 RMRGQFDGSCFLTNIRENSGRSGLESLLQKLFSTVLNDRDLEIGAPGNAHERFE-RRLKS 290

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            ++LIV  D+ D KQI  L+G    +  GSR+IITTRD +L++  +G +    + + +L+
Sbjct: 291 KRLLIVLDDVNDEKQIRYLMGHCKWYQGGSRIIITTRDSKLIETIKGRK----YVLPKLN 346

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
             ++L LFS NAF  + P   F  L+N+V+ YA G PLAL+VLGS L    +  WE+ ++
Sbjct: 347 DREALKLFSLNAFSNSFPLKEFEGLTNMVLDYAKGHPLALKVLGSDLCERDDLYWEAKLD 406

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           +LK   H DI +VL+ SY+ L  E++N+FLD ACFF+  +   V + L++        + 
Sbjct: 407 RLKSRSHGDIYEVLETSYEELTTEQKNVFLDIACFFRSENVDYVTSLLNSHGVDVSGVVK 466

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEI---VRQESIKDPGKRS----------RLWHPE 470
            LV K L+T+S+N+I MHD+LQ M  EI   V    I+D    S          RLW  E
Sbjct: 467 DLVDKCLITLSDNRIEMHDMLQTMAKEISLKVETIGIRDCRWLSRHGNQCQWHIRLWDSE 526

Query: 471 DIYQVLNE--NTSLPTGINLDSLK--------------------ELYLGGCS-------- 500
           DI  +L E   T    GI LD+ K                    ++Y   CS        
Sbjct: 527 DICDLLTEGLGTDKIRGIFLDTSKLRAMRLSAKAFQGMYNLKYLKIYDSHCSRGCEAEFK 586

Query: 501 -NLKR----------------FPEISC-------NIEDLDLKETAIEELPSSIGNLSRLV 536
            +L+R                +P  S        N+ DL L  + +EE+     ++  L 
Sbjct: 587 LHLRRGLSFLPNELTYLHWHGYPLQSIPLDFDPKNLVDLKLPHSQLEEIWDDEKDVGMLK 646

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
            +DL++   L+     L N  +L RLNL GC  L+KLP  I  LE L YLNL +      
Sbjct: 647 WVDLSHSINLRQCLG-LANAHNLERLNLEGCTSLKKLPSTINCLEKLIYLNLRDCTSLRS 705

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWD 655
           +P  +K  S L  L L  C  L+  P +     +     T +K+L  S     R +    
Sbjct: 706 LPKGIKTQS-LQTLILSGCSSLKKFPLISENVEVLLLDGTVIKSLPESIQTFRRLA---- 760

Query: 656 IFNFSNC 662
           + N  NC
Sbjct: 761 LLNLKNC 767



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 87/163 (53%), Gaps = 17/163 (10%)

Query: 472 IYQVLNENTSL---PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
           IY  L + TSL   P GI   SL+ L L GCS+LK+FP IS N+E L L  T I+ LP S
Sbjct: 693 IYLNLRDCTSLRSLPKGIKTQSLQTLILSGCSSLKKFPLISENVEVLLLDGTVIKSLPES 752

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
           I    RL  L+L NC  LK +SS L  LK L+ L LSGC +LE  PE   ++ESLE L +
Sbjct: 753 IQTFRRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCSQLEVFPEIKEDMESLEILLM 812

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
            +    ++P  M  LS +    L             CG+S H 
Sbjct: 813 DDTSITEMP-KMMHLSNIKTFSL-------------CGTSSHV 841



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 97/183 (53%), Gaps = 10/183 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L  L+EL L GCS L+ FPEI  ++E L+   + +T+I E+P  + +LS +    L   S
Sbjct: 780 LKCLQELILSGCSQLEVFPEIKEDMESLEILLMDDTSITEMPKMM-HLSNIKTFSLCGTS 838

Query: 545 GLKSVSSRLC----NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
              SVS            L  L LS C  L KLP+ IG L SL+ L L+  + E +P S 
Sbjct: 839 SHVSVSMFFMPPTLGCSRLTDLYLSRC-SLYKLPDNIGGLSSLQSLCLSGNNIENLPESF 897

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
            QL+ L    L+ CK L+SLP LP     + A  C SL+TL+N  T LT   +   +F F
Sbjct: 898 NQLNNLKWFDLKFCKMLKSLPVLPQNLQYLDAHECESLETLANPLTPLTVGERIHSMFIF 957

Query: 660 SNC 662
           SNC
Sbjct: 958 SNC 960



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 25/138 (18%)

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL-------- 580
           + N   L  L+L  C+ LK + S +  L+ L  LNL  C  L  LP+ I           
Sbjct: 662 LANAHNLERLNLEGCTSLKKLPSTINCLEKLIYLNLRDCTSLRSLPKGIKTQSLQTLILS 721

Query: 581 ------------ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
                       E++E L L     + +P S++   +L+ L L+NCK+L+ L      S 
Sbjct: 722 GCSSLKKFPLISENVEVLLLDGTVIKSLPESIQTFRRLALLNLKNCKKLKHL-----SSD 776

Query: 629 IHARHCTSLKTLSNSSTL 646
           ++   C     LS  S L
Sbjct: 777 LYKLKCLQELILSGCSQL 794


>gi|255579431|ref|XP_002530559.1| conserved hypothetical protein [Ricinus communis]
 gi|223529897|gb|EEF31827.1| conserved hypothetical protein [Ricinus communis]
          Length = 833

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 221/487 (45%), Positives = 303/487 (62%), Gaps = 56/487 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF+SFRG DVR  F+SHL+ +L R ++  F+D+KL RG EI+ SL   IE S +SIVI
Sbjct: 16  YDVFISFRGADVRDGFLSHLHQSLDRNQVNAFVDEKLKRGKEITSSLLEIIEKSYVSIVI 75

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSES 135
           FS+ YA S WCL+ELVKI E   K  QIVV                            +S
Sbjct: 76  FSKNYADSPWCLDELVKIFECYKKMKQIVV--------------------------RPDS 109

Query: 136 VLIEGNVNDISKKLSDLFPSD-NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIG 194
            LI   V+ + ++L  L PSD  +D L G++S  K++ S L   ST+   +GIWG+GGIG
Sbjct: 110 RLIREIVSHVLEELDHLTPSDVCEDGLFGIDSRSKDVRSLLCLESTDVQVIGIWGMGGIG 169

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDESEK-----------VGGLANIHLNFE------ 237
           KTTI   ++S I   F    F+ ++R++ E             G L   +LN        
Sbjct: 170 KTTIVYKLFSQIHKQFPRQCFVADVREKFENSTKCSLQSEILYGLLGKDNLNTGMPMKLN 229

Query: 238 ---RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
              RRRLS+ KVLIV  D++DL QI+ ++G    +  GSR+IIT+RD QLLKN     VG
Sbjct: 230 SSVRRRLSQEKVLIVLDDVSDLDQIEYVVGSHVIYGSGSRIIITSRDRQLLKN-----VG 284

Query: 295 -HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
             V+EVK+L++ ++L LF+ +AF QN P   ++EL  + I YA G+PLAL+VLGS L G 
Sbjct: 285 AKVYEVKKLNHFEALHLFNLHAFKQNPPKKEYMELLRMAINYAQGIPLALKVLGSNLYGK 344

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
           S EEWE  + KLK      ++K+L++SYDGLD++++ IFLD ACFFKG D+ +V N L+ 
Sbjct: 345 SVEEWEDELEKLKVSSDTKVKKILRISYDGLDEKQKEIFLDIACFFKGYDKDIVTNVLNG 404

Query: 414 CRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI 472
           C F AK GIS L+ KSLVTIS +NK+ MHDLLQ MG +IV +E  K+ G+R+RLW+ ED+
Sbjct: 405 CGFFAKSGISHLIDKSLVTISRDNKLGMHDLLQTMGKDIVSEE--KELGRRTRLWNSEDV 462

Query: 473 YQVLNEN 479
           Y+VL ++
Sbjct: 463 YKVLAKD 469


>gi|356558199|ref|XP_003547395.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1062

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 258/729 (35%), Positives = 360/729 (49%), Gaps = 129/729 (17%)

Query: 6   SSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSA 65
           S  N  P  K+DVF+SFRGKDVR  F+SHL     R KI  F+DDKL  G+EI  SL  A
Sbjct: 62  SEDNKAPQTKYDVFVSFRGKDVRGTFLSHLIEIFKRNKINAFVDDKLKPGDEIWSSLVEA 121

Query: 66  IEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL--- 122
           IE S I ++IFS+ YASS WCL EL  ILE   KYG+IV+PVFY V+P+D  +       
Sbjct: 122 IEQSFILLIIFSQSYASSPWCLEELEAILECNKKYGRIVIPVFYHVEPADVRHQRGTYKN 181

Query: 123 ----------GWMGIFDIPTSESVLIEG-------NVNDISKKLSDLFPSD------NKD 159
                       + I+     ES  I G       N  ++ +++  L          N  
Sbjct: 182 AFKKHQKRNKNKVQIWRHALKESANISGIETSKIRNEVELLQEIVRLVLERLGKSPINSK 241

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            L+G++  I  +E  +         +GIWG+ G GKTT+A  ++  + S ++G YF+ N 
Sbjct: 242 ILIGIDEKIAYVELLIRKEPEATCLIGIWGMAGNGKTTLAEEVFKKLQSEYDGCYFLPNE 301

Query: 220 RDESEKVG----------GL---------ANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           R++S + G          GL          N+ L+ +RR + RMKVLIV  D+ D   ++
Sbjct: 302 REQSSRHGIDSLKKEIFSGLLENVVTIDNPNVSLDIDRR-IGRMKVLIVLDDVNDPDHLE 360

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G  D F  GSR+IITTR VQ+L     ++   ++++ E S + +L LF+  AF Q+ 
Sbjct: 361 KLLGTPDNFGSGSRIIITTRYVQVLN---ANKANEIYQLGEFSLDKALELFNLIAFKQSD 417

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
               + ELS  V+ YA G PL L+VL   L G ++EEWE  ++ LKRMP  D  KV+K+S
Sbjct: 418 HQWEYNELSKKVVDYAKGNPLVLKVLAQLLCGKNKEEWEGMLDTLKRMPPADAYKVMKLS 477

Query: 381 YDGLDDEEQNIFLDTACFF----------------KGNDQYLVMNFLDACRFSAKIGISR 424
           YD LD +EQ IFLD ACFF                KGN+    + F           + R
Sbjct: 478 YDELDRKEQQIFLDLACFFLRTHTTVNVSNLKSLLKGNESQETVTF----------RLGR 527

Query: 425 LVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-- 481
           L  K+L+T S +N I MHD LQEM  EIVR+ES +DPG RSRLW P DI++ L    S  
Sbjct: 528 LKDKALITYSDDNVIAMHDSLQEMALEIVRRESSEDPGSRSRLWDPNDIFEALKNVKSTK 587

Query: 482 --------LPTGI----------NLDSLKELYLGG-CSN--------LKRFPEISCN--- 511
                   LPT +           ++ L+ L + G C          L ++ + S N   
Sbjct: 588 AIRSILIHLPTFMKQELDPHIFGKMNRLQFLEISGKCEKDIFDEHNILAKWLQFSANELR 647

Query: 512 ------------IEDLDLKETAIEELPS--------SIGNLSRLVDLDLTNCSGLKSVSS 551
                        ED   ++  I +LP          + NL  L +L LT+   L+ +  
Sbjct: 648 FLCWYRYPLKSLPEDFSAEKLVILKLPKGEIKYLWHGVKNLMNLKELHLTDSKMLEELPD 707

Query: 552 RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
            L N  +L  L L GC  L ++   I +L  LE LNL +       +S   L  LS L L
Sbjct: 708 -LSNATNLEVLVLQGCSMLTRVHPSIFSLGKLEKLNLQDCTSLTTLASNSHLCSLSYLNL 766

Query: 612 QNCKRLQSL 620
             C++L+ L
Sbjct: 767 DKCEKLRKL 775



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 28/203 (13%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           NL +LKEL+L     L+  P++S   N+E L L+  + +  +  SI +L +L  L+L +C
Sbjct: 687 NLMNLKELHLTDSKMLEELPDLSNATNLEVLVLQGCSMLTRVHPSIFSLGKLEKLNLQDC 746

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKL---PEEI-----------------GNLESL 583
           + L +++S   +L SL  LNL  C KL KL    E I                 G+   L
Sbjct: 747 TSLTTLASN-SHLCSLSYLNLDKCEKLRKLSLIAENIKELRLRWTKVKAFSFTFGHESKL 805

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI----HARHCTSLKT 639
           + L L     +K+PS +K L +LS L +  C  LQ +P+LP    I    +++ CTSLKT
Sbjct: 806 QLLLLEGSVIKKLPSYIKDLMQLSHLNVSYCSNLQEIPKLPPSLKILDARYSQDCTSLKT 865

Query: 640 LSNSSTLLTRSSKHWDIFNFSNC 662
           +   ST   +  ++     F NC
Sbjct: 866 VVFPSTATEQLKEYRKEVLFWNC 888


>gi|444739192|dbj|BAM77406.1| clubroot disease resistance protein [Brassica rapa]
          Length = 1224

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 249/714 (34%), Positives = 358/714 (50%), Gaps = 113/714 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           HDVF SFRG+DVR  F+SH+     R+ I  FID+++ RG  I P L  AI GSKI+IV+
Sbjct: 70  HDVFPSFRGEDVRIGFLSHIQKEFKRKGITPFIDNEIRRGESIGPELIRAIRGSKIAIVL 129

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----GY------------- 118
            S  YASS+WCL+ELV++++ K + GQ V+PVFY VDPS      GY             
Sbjct: 130 LSRNYASSKWCLDELVEVMKCKEELGQTVIPVFYKVDPSHVKKLRGYFGKVFEKTCEGKS 189

Query: 119 ----------CPSLGWMGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                        +  +  +D  T  +E+ +IE    D+S KL    PS + + LVG+ +
Sbjct: 190 KEDTEKWRHALEKVATIAGYDSSTWDNEAAMIEQIATDVSNKLISSVPSSDFNSLVGMRA 249

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            +K +E  L   S E   +GIWG  GIGK+TIA +++S  S  F+ S FM+NI+ E  + 
Sbjct: 250 HMKSMELLLRLDSDEVRMIGIWGPSGIGKSTIARSLFSQHSPDFQLSVFMENIKREYPRP 309

Query: 227 ----------------------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                                   +A  HL   + RL   KVL+V  D+    Q+D L  
Sbjct: 310 CFDRYSAQVQLQNKFLSLILNQNDVAIHHLGVAQDRLKNKKVLVVLDDVDHSAQLDALAK 369

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
               F  GSR+I+TT+D ++L  H   R+ H++EV     +++L +F  NAFGQ  P  G
Sbjct: 370 ETCWFGSGSRIIVTTQDKKILNAH---RINHIYEVGFPHDDEALEIFCINAFGQKSPYDG 426

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F +L+  V +    +PL L V+GSY KG+S+E WE  + +L+     + + +LK SYD L
Sbjct: 427 FGDLAREVTRLVGNLPLGLSVMGSYFKGLSKEVWERELPRLRTRLDGETESILKFSYDAL 486

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG-KSLVTI-SNNKITMHD 442
            DE+Q +FL  ACFF G     V  FL A +F A  G  R++  KSL+++ S   I MHD
Sbjct: 487 CDEDQALFLHIACFFNGERTDKVEEFL-AEKFVAVEGRLRVLAEKSLISVGSEGYIRMHD 545

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT---SLPTGIN------------ 487
           LL  +G EIVR++S  +PG+R  L    DI QVL ++T       GIN            
Sbjct: 546 LLARLGREIVRKQSPNEPGQRQFLVDDGDIRQVLRDDTLGSRSVIGINFLLKKKLKISDQ 605

Query: 488 ------------LDS--LKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSI- 529
                       LDS    ++   G S+      ++C    +  LD +   +  LPS   
Sbjct: 606 AFERMSNLQFLRLDSQYFAQILFEGKSSQYILESVNCLPREVRLLDWRTFPMTCLPSDFN 665

Query: 530 -----------GNLSRLVD----------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
                       NL +L +          +DL++   LK + + L    +LR LNL GC 
Sbjct: 666 PELLMEIKMICSNLEKLWEGNKTIRNLKWMDLSHSKNLKELPN-LSTATNLRELNLFGCS 724

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L +LP  IGNL +L+ LNL       ++PSS+  ++ L +L L  C  L  LP
Sbjct: 725 SLMELPSSIGNLTNLKKLNLKLCSSLMELPSSIGNMTNLENLNLSGCSSLVELP 778



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 85/165 (51%), Gaps = 36/165 (21%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP  IN+ SL  L L  CS LK FPEIS NI  L +K TAIEE+P+SI + SRL  LD+
Sbjct: 918  ALPVNINMKSLDFLDLSYCSVLKSFPEISTNIIFLGIKGTAIEEIPTSIRSWSRLDTLDM 977

Query: 541  ----------------TNC----SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE----- 575
                            TN     +G++ +S  +  +  LR L ++GC KL  LP+     
Sbjct: 978  SYSENLRKSHHAFDLITNLHLSDTGIQEISPWVKEMSRLRELVINGCTKLVSLPQLPDSL 1037

Query: 576  ---EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
                + N ESLE L+  +  F +        +KL+DLR  NC +L
Sbjct: 1038 EFMHVENCESLERLDSLDCSFYR--------TKLTDLRFVNCLKL 1074



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 12/163 (7%)

Query: 490 SLKELYLGGCSNLKRFPEISC--NIEDLDL-KETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +LK + L    NLK  P +S   N+ +L+L   +++ ELPSSIGNL+ L  L+L  CS L
Sbjct: 691 NLKWMDLSHSKNLKELPNLSTATNLRELNLFGCSSLMELPSSIGNLTNLKKLNLKLCSSL 750

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSK 605
             + S + N+ +L  LNLSGC  L +LP  I N+ +LE  NL++     ++  S+  ++ 
Sbjct: 751 MELPSSIGNMTNLENLNLSGCSSLVELPSSISNMTNLENFNLSQCSSVVRLSFSIGNMTN 810

Query: 606 LSDLRLQNCKRLQSLPELPCGS-----SIHARHCTSLKTLSNS 643
           L +L L  C    SL EL  G+     ++    C+SL  +S+S
Sbjct: 811 LKELELNEC---SSLVELTFGNMTNLKNLDPNRCSSLVEISSS 850



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 82/141 (58%), Gaps = 6/141 (4%)

Query: 487 NLDSLKELYLGGCSNLKR--FPEISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           N+ +LKEL L  CS+L    F  ++ N+++LD    +++ E+ SSIGN++ LV LDLT C
Sbjct: 807 NMTNLKELELNECSSLVELTFGNMT-NLKNLDPNRCSSLVEISSSIGNMTNLVRLDLTGC 865

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQ 602
           S L  +   + N+ +L  L LSGC  L +LP  IGNL +L+ LNL        +P ++  
Sbjct: 866 SSLVELPYSIGNMTNLETLELSGCSSLVELPSSIGNLHNLKRLNLRNCSTLMALPVNI-N 924

Query: 603 LSKLSDLRLQNCKRLQSLPEL 623
           +  L  L L  C  L+S PE+
Sbjct: 925 MKSLDFLDLSYCSVLKSFPEI 945


>gi|225448269|ref|XP_002270337.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1256

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 229/527 (43%), Positives = 298/527 (56%), Gaps = 60/527 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG D R+NF  HL  AL R  I TF DD L RG  I P L  AIEGS+ S+++
Sbjct: 23  YDVFLSFRGADTRYNFTDHLYKALDRRGIRTFRDDTLRRGEAIDPELLKAIEGSRSSVIV 82

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSLG 123
           FSE YA SR CL+ELVKI+E +   G  V+P+FY VDPS             AGY     
Sbjct: 83  FSENYAHSRSCLDELVKIMECQKDLGHTVIPIFYHVDPSHVRKQEGSFGAAFAGY--EEN 140

Query: 124 WMGIFDIPTSESVLIEG------------NVNDISKKLSDLFPS------DNKDQLVGVE 165
           W     IP   + L E               ++I K   D+F        D  D LVG++
Sbjct: 141 WKD--KIPRWRTALTEAANLSGWHLQDGYESDNIKKITDDIFRQLNCKRLDVGDNLVGID 198

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
             +KE++ +L   S     VGI+GIGGIGKTTIA  IY+N+SS FE   F++NIR  S  
Sbjct: 199 FRLKEMDLRLDMESDAVRIVGIYGIGGIGKTTIARVIYNNLSSEFECMSFLENIRGVSNT 258

Query: 226 VG----------------GLANIHLNFE-----RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
            G                G+ NI+         +  LS  +V IV  D+ +L Q++ L+ 
Sbjct: 259 RGLPHLQNQLLGDILGGEGIQNINCVSHGAIMIKSILSSKRVFIVLDDVDNLVQLEYLLR 318

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
                  GSRVIITTR+  LL N +G  V  ++EV +L++N++  LFS  AF QNHP +G
Sbjct: 319 NRGWLGKGSRVIITTRNKHLL-NVQG--VDDLYEVDQLNFNEAYELFSLYAFKQNHPKSG 375

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F+ LS   + Y   +PLAL+VLGS L   +  +WES + KL+R+P  +I  VLK SYDGL
Sbjct: 376 FVNLSYSAVSYCQHLPLALKVLGSLLFSKTIPQWESELLKLERVPEAEIHNVLKRSYDGL 435

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           D  E+NIFLD ACFFK  D+  V+  LD C F A+ GI  L+ KSL+T+S N+I +HDL+
Sbjct: 436 DRTEKNIFLDIACFFKDEDRDFVLRILDGCNFHAERGIENLIDKSLITLSYNQIRLHDLI 495

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLD 489
           Q+MG EIVR+    +P K SRLW P DI + L   E       INLD
Sbjct: 496 QQMGWEIVRENFPNEPDKWSRLWDPHDIERALTTYEGIKGVETINLD 542



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 87/168 (51%), Gaps = 27/168 (16%)

Query: 482  LPTGIN-LDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
            LP  I  L SL+ L +  CS  + FPE   N   +++L LK TAI++LP SIG+L  L  
Sbjct: 964  LPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKSLKELSLKNTAIKDLPDSIGDLESLWF 1023

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRL-----------------------NLSGCLKLEKLP 574
            LDLTNCS  +    +  N+KSLR L                       +LS C K EK P
Sbjct: 1024 LDLTNCSKFEKFPEKGGNMKSLRVLYLNDTAIKDLPDSIGDLESLEFLDLSDCSKFEKFP 1083

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            E+ GN++SL+ L+L     + +P S++ L  L  L L +C + +  PE
Sbjct: 1084 EKGGNMKSLKKLSLKNTAIKDLPYSIRDLESLWFLDLSDCSKFEKFPE 1131



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 26/167 (15%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDL 538
            LP+ I+L+S++ L L  C   ++F E   N++ L    L  TAI+ELP+ I N   L  L
Sbjct: 871  LPSSIDLESVEILDLSNCFKFEKFSENGANMKSLRQLVLTNTAIKELPTGIANWESLRTL 930

Query: 539  DLTNCS-----------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            DL+ CS                        +K +   +  LKSL  LN+S C K E  PE
Sbjct: 931  DLSKCSKFEKFPEIQGNMTSLKKLLLNNTAIKGLPDSIGYLKSLEILNVSDCSKFENFPE 990

Query: 576  EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            + GN++SL+ L+L     + +P S+  L  L  L L NC + +  PE
Sbjct: 991  KGGNMKSLKELSLKNTAIKDLPDSIGDLESLWFLDLTNCSKFEKFPE 1037



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 41/185 (22%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
            LP  I +L+SL  L L  CS  ++FPE   N++ L    L +TAI++LP SIG+L  L  
Sbjct: 1011 LPDSIGDLESLWFLDLTNCSKFEKFPEKGGNMKSLRVLYLNDTAIKDLPDSIGDLESLEF 1070

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRL-----------------------NLSGCLKLEKLP 574
            LDL++CS  +    +  N+KSL++L                       +LS C K EK P
Sbjct: 1071 LDLSDCSKFEKFPEKGGNMKSLKKLSLKNTAIKDLPYSIRDLESLWFLDLSDCSKFEKFP 1130

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ--------------SL 620
            E+ GN++SL  L L     + +P+++  L  L  L L  C  L               ++
Sbjct: 1131 EKGGNMKSLMDLRLKNTAIKDLPNNISGLKFLETLNLGGCSDLWEGLISNQLCNLQKINI 1190

Query: 621  PELPC 625
            PEL C
Sbjct: 1191 PELKC 1195



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 33/211 (15%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP+ I+ L+SL+ L L  CS+  +F EI  N+  L    LKETA ++LP+SIGN     D
Sbjct: 777 LPSSISMLESLQLLDLSKCSSFCKFSEIQGNMRCLREPYLKETATKDLPTSIGNSRSFWD 836

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRL----------------------NLSGCLKLEKLPE 575
           L     S L+       N++SLR L                      +LS C K EK  E
Sbjct: 837 LYPCGRSNLEKFLVIQQNMRSLRLLYLCKTAIRELPSSIDLESVEILDLSNCFKFEKFSE 896

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR--- 632
              N++SL  L L     +++P+ +     L  L L  C + +  PE+    +   +   
Sbjct: 897 NGANMKSLRQLVLTNTAIKELPTGIANWESLRTLDLSKCSKFEKFPEIQGNMTSLKKLLL 956

Query: 633 HCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
           + T++K L +S   L    K  +I N S+CS
Sbjct: 957 NNTAIKGLPDSIGYL----KSLEILNVSDCS 983



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 10/116 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE----TAIEELP--SSIGNLSR 534
           SLP+  + ++L EL+L  CSN+K+  + +  +E L + +    T + ++P  SS+ NL R
Sbjct: 683 SLPSNFDGENLVELHLK-CSNIKQLWQGNKYLESLKVIDLSYSTKLIQMPEFSSLSNLER 741

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
           L+   L  C  L  +   +  LK L  LNL  CLK++ LP  I  LESL+ L+L++
Sbjct: 742 LI---LKGCVSLIDIHPSIGGLKKLTTLNLKWCLKIKGLPSSISMLESLQLLDLSK 794



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 16/144 (11%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L+SLK + L   + L + PE S   N+E L LK   ++ ++  SIG L +L  L+L  C 
Sbjct: 713 LESLKVIDLSYSTKLIQMPEFSSLSNLERLILKGCVSLIDIHPSIGGLKKLTTLNLKWCL 772

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            +K + S +  L+SL+ L+LS C    K  E  GN+  L    L E   + +P+S+    
Sbjct: 773 KIKGLPSSISMLESLQLLDLSKCSSFCKFSEIQGNMRCLREPYLKETATKDLPTSIGNSR 832

Query: 605 KLSDLRLQNCKRLQSLPELPCGSS 628
              DL              PCG S
Sbjct: 833 SFWDL-------------YPCGRS 843


>gi|105922557|gb|ABF81423.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1359

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 260/743 (34%), Positives = 374/743 (50%), Gaps = 146/743 (19%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
            +DVFLSFRGKD R+NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+ S +
Sbjct: 349  YDVFLSFRGKDTRNNFTSHLYSNLKQRGIDVYMDDRELERGKTIEPALWKAIEESRFSFI 408

Query: 75   IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
            IFS  YASS WCL+ELVKI++   +    V+PVFY VDPS+                   
Sbjct: 409  IFSRDYASSPWCLDELVKIVQCMKEMDHTVLPVFYDVDPSETYEKAFVEHEQNFKENLEK 468

Query: 117  ----GYCPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                  C S      GW  + +   SES+ I      IS KLS   P      LVG++S 
Sbjct: 469  VQIWKDCLSTVTNLSGW-DVRNRNESESIKIIAEY--ISYKLSVTMPVSK--NLVGIDSR 523

Query: 168  IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE----- 222
            ++ +   +     E   +GI G+GGIGKTT+A  +Y      F+GS F+ N+R+      
Sbjct: 524  LEILNGYIGEEVGEAIFIGICGMGGIGKTTVARVVYDRFHWQFKGSCFLANVREVFVEKD 583

Query: 223  ----------SEKVGGLANI-----HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
                      SE +   ANI      +   +RRL   K+ +V  D+ D KQ++ L     
Sbjct: 584  GPRRLQEQLLSEILMERANICDSSRGIEMIKRRLQHKKIRVVLDDVDDHKQLESLAAESK 643

Query: 268  GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
             F PGSR+IIT RD Q+L  +    V  ++E ++L+ +D+L LFS+ AF  + PA  F+E
Sbjct: 644  WFGPGSRIIITGRDRQVLTRNG---VARIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVE 700

Query: 328  LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
            LS  V+ YANG+PLAL+V+GS++ G S  EW SA+N+L  +P  +I  VL++S+DGL + 
Sbjct: 701  LSKQVVGYANGLPLALEVIGSFMHGRSILEWGSAINRLNEIPDREIIDVLRISFDGLHEL 760

Query: 388  EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
            E+ IFLD ACF KG  +  ++  LD+C F A IG   L+ KSL+++S +++ MH+LLQ M
Sbjct: 761  EKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIM 820

Query: 448  GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----------LP----TGINLDS--- 490
            G EIVR ES ++PG+RSRLW   D+   L +NT           +P    +  N++S   
Sbjct: 821  GKEIVRCESPEEPGRRSRLWTYADVCLALMDNTGKEKIEAIFLDMPGIKESQWNMESFSK 880

Query: 491  LKELYLGGCSN--LKRFPE-ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN----- 542
            +  L L   +N  L   PE IS  ++ L+     ++ LP  +  + +LV+L + N     
Sbjct: 881  MSRLRLLKINNVQLSEGPEDISNKLQFLEWHSYPLKSLPVGL-QVDQLVELHMANSSIEQ 939

Query: 543  -----------------------------------------CSGLKSVSSRLCNLKSLRR 561
                                                     C+ L  V   L + K L+ 
Sbjct: 940  LWYGYKSAVNLKIINLSNSLNLIKTPDFTGIPNLKNLILEGCTSLSEVHPSLAHHKKLQY 999

Query: 562  LN-----------------------LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            +N                       L GC KLEK P+ +GN+  L  L L      K+ S
Sbjct: 1000 MNLVNCKSIRILPNNLEMGSLKVCILDGCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSS 1059

Query: 599  SMKQLSKLSDLRLQNCKRLQSLP 621
            SM  L  L  L + NCK L+S+P
Sbjct: 1060 SMHHLIGLGLLSMNNCKNLESIP 1082



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 70/109 (64%), Gaps = 3/109 (2%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDL 538
            LP  + + SLK   L GCS L++FP+I  N+  L    L  T I +L SS+ +L  L  L
Sbjct: 1011 LPNNLEMGSLKVCILDGCSKLEKFPDIVGNMNCLTVLRLDGTGITKLSSSMHHLIGLGLL 1070

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
             + NC  L+S+ S +  LKSL++L+LSGC +L+ +PE++G +ESLE L+
Sbjct: 1071 SMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGKVESLEELD 1119



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 3/103 (2%)

Query: 13   HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKIS 72
            H    VF   R  D   N +++L + L R  I   +  +  +   I   L  AIE S +S
Sbjct: 1214 HWMASVFPGIRAADT-SNAITYLKSDLARRVI-IPVKKEPEKVMAIRSRLFEAIEESGMS 1271

Query: 73   IVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
            I+IF++  AS  WC +ELVKI    ++     V PV Y V+ S
Sbjct: 1272 IIIFAKDCASLPWCFDELVKIFGFMDEMRSNTVFPVSYNVEQS 1314


>gi|147845097|emb|CAN78476.1| hypothetical protein VITISV_009816 [Vitis vinifera]
          Length = 826

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 279/757 (36%), Positives = 384/757 (50%), Gaps = 143/757 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MASS +S       + DVFLSFRG+D R NF  HL +AL    I TF DD+ L RG EI 
Sbjct: 1   MASSGTSSFXX---RWDVFLSFRGEDTRXNFTDHLYSALTSRGIHTFRDDEGLERGGEIQ 57

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           PSL  AIE SK+SIV+FS+ YA S+WCL+EL KI+ES+ + GQIVVPVFY VDPSD    
Sbjct: 58  PSLLKAIEESKVSIVVFSKNYAHSQWCLDELYKIMESRREKGQIVVPVFYHVDPSDVRKQ 117

Query: 116 -----------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSD- 151
                                  A    + G  G       ES +I   V  ISK L   
Sbjct: 118 TGSFGKAFARYKKVTKERVLRWRAALTQAGGLSGWHVEHGYESQIIXVIVGRISKMLISR 177

Query: 152 ---LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
              L  S N   LVG +S ++E+ S L   S +   +GI GIGGIGKTT+A  IY+ I+ 
Sbjct: 178 PKLLCISAN---LVGFDSRLEEMSSLLCMESNDVRMIGIHGIGGIGKTTLAIGIYNQIAH 234

Query: 209 HFEGSYFMQNIRDE------------------SEKVGGLANIH--LNFERRRLSRMKVLI 248
            FEG+ F+ N  +                    EK+  ++NI   ++  ++ L   KVLI
Sbjct: 235 QFEGASFLPNAAEVKEHRGSLKLQRKLLADILGEKIARISNIDEGISLIKKTLCSRKVLI 294

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           +  D++ L Q++ L G    F  GSR+IIT+R+  LL  H    V  ++EV++L   ++ 
Sbjct: 295 ILDDVSALTQLEFLAGSRHWFGSGSRIIITSRNKHLLDVHE---VDGLYEVQKLKSEEAF 351

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            LFS  AF  +     F ELS   + Y +G+PLA++V+G YL+  +E EWE  + KL  +
Sbjct: 352 KLFSLYAFEADLXDDRFWELSGRALNYCDGLPLAVKVVGCYLRXKTELEWEDELLKLTTV 411

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
             + +Q VL++SYD L+  E+++FLD ACFF+G D   V   LD+C FSA IG+  L   
Sbjct: 412 GQJTVQYVLRLSYDRLEHTEKDLFLDIACFFRGKDSDSVGRILDSCNFSA-IGMKVLKDC 470

Query: 429 SLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI 486
           S ++I +NKI MH L+Q+MG EI+R+ES   PG+RSRLW+PED++ VL + T      GI
Sbjct: 471 SFISILDNKIEMHGLMQQMGWEIIRRESPGQPGQRSRLWNPEDVHAVLTQKTGTKAIEGI 530

Query: 487 NLD------------SLKEL--------YLGGC----SNLKRFPE----ISCNIEDLDLK 518
           + D            +LK++        Y  G     SN    PE     S  +  L   
Sbjct: 531 SFDVSASKEIQITSEALKKMTNLRLLRVYWDGLSSYDSNTVHLPEEFEFPSYELRYLHWD 590

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCS--GLKSVSSRLCNLK------------------- 557
             ++E LPS+  N  +LV+L L + S   L   +  L NLK                   
Sbjct: 591 GWSLESLPSNF-NGKKLVELSLKHSSLNHLWKGNKCLENLKVMDLSHSXYLVECPDVSGA 649

Query: 558 -SLRRLN----------------------------LSGCLKLEKLPEEIGNLESLEYLNL 588
            SL  LN                            LSGC +LEK P+   N+ESL  L+L
Sbjct: 650 PSLETLNLYGCTSLREDASLFSQNHWIGKKLEVLNLSGCSRLEKFPDIKANMESLLELHL 709

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
                 ++PSS+  L  L  L +++CK L+ LP   C
Sbjct: 710 EGTAIIELPSSVGYLRGLVLLNMKSCKNLKILPGRIC 746



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 89/143 (62%), Gaps = 3/143 (2%)

Query: 491 LKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L+ L L GCS L++FP+I  N+E   +L L+ TAI ELPSS+G L  LV L++ +C  LK
Sbjct: 680 LEVLNLSGCSRLEKFPDIKANMESLLELHLEGTAIIELPSSVGYLRGLVLLNMKSCKNLK 739

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
            +  R+C+LKSL+ L LSGC KLE+LPE    +E LE L L      ++P S+ +L  L 
Sbjct: 740 ILPGRICDLKSLKTLILSGCSKLERLPEITEVMEHLEELLLDGTSIRELPRSILRLKGLV 799

Query: 608 DLRLQNCKRLQSLPELPCGSSIH 630
            L L+ CK L++L    CG   H
Sbjct: 800 LLNLRKCKELRTLRNSICGLKSH 822


>gi|359493412|ref|XP_002280045.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1077

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 264/715 (36%), Positives = 367/715 (51%), Gaps = 126/715 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+NF +HL   L  + I TFIDD KL RG  ISP+L +AIE S  SI+
Sbjct: 16  YDVFLSFRGEDTRNNFTAHLYQELRTKGINTFIDDDKLERGRVISPALVTAIENSMFSII 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           + SE YASS+WCL EL KILE     GQ V+P+FY VDPSD       +  +L       
Sbjct: 76  VLSENYASSKWCLEELAKILECMKTRGQRVLPIFYNVDPSDVRNHRGKFGAALAEHEKNL 135

Query: 124 ---------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W           G      +E +LI+  V  +  KL ++   D  ++LVG+
Sbjct: 136 TENMERVQIWKDALTQVANLSGWESRNKNEPLLIKEIVKHVLNKLLNICSGDT-EKLVGI 194

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI----- 219
           ++ I+EI+ +L   S +   +GIWG+GGIGKTT+A A+Y+ IS  FE   F++++     
Sbjct: 195 DARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHSFLEDVGKVLA 254

Query: 220 ----------------RDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
                            ++   + GL +I     + RL   KVL+V  ++ D    + LI
Sbjct: 255 NEGLIKLQQIFLSSLLEEKDLNMKGLTSI-----KARLHSKKVLVVLDNVNDPTIFECLI 309

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           G  D F  GSR+IIT RD  L+     S     +EV + + +++      ++        
Sbjct: 310 GNQDWFGRGSRIIITARDKCLI-----SHGVDYYEVPKFNSDEAYEFIKCHSLKHELLRG 364

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
            F+ELS  +I YA G+PLAL+VL   L  MS+EE  + ++KLK   +  I++VL++SYDG
Sbjct: 365 DFMELSTSMIGYAQGLPLALKVLRPILFSMSKEESRNQLDKLKSTLNKKIEEVLRISYDG 424

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDL 443
           LDD+E+NIFLD ACFFKG D+  V+  LD C F    GI  L+ KSL++I  NK  MHDL
Sbjct: 425 LDDKEKNIFLDIACFFKGEDKDYVIEILDGCGFFPLCGIRSLIDKSLISIYGNKFQMHDL 484

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT----------------------- 480
           +QEMG EIVRQ+S+++ GKRSRL   EDIY VL +NT                       
Sbjct: 485 IQEMGLEIVRQQSLQELGKRSRLLFHEDIYDVLKKNTGSEKIEGIFLNLFHLQETIDFTT 544

Query: 481 --------------SLPTGIN-----------------------LDSLKELYLGGCSNLK 503
                         SLP   N                       L+ LK + L     L 
Sbjct: 545 QAFAGMNLYGYSLKSLPNDFNAKNLVHLSMPCSRIEQLWKGIKVLEKLKRMDLSHSKYLI 604

Query: 504 RFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
             P +S   N+E L L++  ++ ++  S+ +L  L  L L NC  LKS+ S   +LKSL 
Sbjct: 605 ETPNLSRVTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGPYDLKSLE 664

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
            L LSGC K E+  E  GNLE L+ L        ++PSS+     L  L L+ CK
Sbjct: 665 ILILSGCSKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLVILSLEGCK 719



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 94/181 (51%), Gaps = 22/181 (12%)

Query: 481 SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+G  +L SL+ L L GCS  ++F E   N+E   +L    TA+ ELPSS+     LV
Sbjct: 652 SLPSGPYDLKSLEILILSGCSKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLV 711

Query: 537 DLDLTNCSGLKSVS----SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES---------- 582
            L L  C G  S S     R  N    R  NLSG   L  L     NL            
Sbjct: 712 ILSLEGCKGPPSASWWFPRRSSNSTGFRLHNLSGLCSLSTLNLSYCNLSDETNLSSLVLL 771

Query: 583 --LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-IHARHCTSLKT 639
             LEYL+L   +F  +P+ + +LS+L D++L+NC RLQ LP+LP     + AR+CTSLK 
Sbjct: 772 SSLEYLHLCGNNFVTLPN-LSRLSRLEDVQLENCTRLQELPDLPSSIGLLDARNCTSLKN 830

Query: 640 L 640
           +
Sbjct: 831 V 831


>gi|224127230|ref|XP_002329432.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870482|gb|EEF07613.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1136

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 264/701 (37%), Positives = 369/701 (52%), Gaps = 107/701 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVFLSFRG+D R  F SHL AAL R++I  FID +L RG+EIS SL   IE +K+S++
Sbjct: 45  KHDVFLSFRGEDTRGGFTSHLYAALDRKQIRAFIDYQLRRGDEISASLLRTIEEAKLSVI 104

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------------------- 114
           +FSE YASS+WCL EL KI+E +   GQIV+PVFY VDPS                    
Sbjct: 105 VFSENYASSKWCLEELAKIIERRRNNGQIVIPVFYKVDPSHVRNQTRSFGDALARLIKKK 164

Query: 115 ------DAGYCPSL-------GW-MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                 +  +  +L       GW +G  ++   E   I+  V D+ +KL  +  S     
Sbjct: 165 ALTMDKEQSFRDALTAAANLSGWSLGNSEL---EFEFIKNIVGDVLEKLHAMSSSHTMAG 221

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           L+G++  + ++ES L   S +   VGIWG+GGIGKTTIA A+ + + S FE  +F  N R
Sbjct: 222 LLGIDVHVSKVESLLNIESPDVLIVGIWGMGGIGKTTIAEAVCNKVHSQFERIFF-ANCR 280

Query: 221 DESE----------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI----D 260
            +S+                 +G L+ +  +F R RL R+KV IV  D+ DL ++    D
Sbjct: 281 QQSDLPRRFLKRLLGQETLNTMGSLSFLD-SFVRDRLRRIKVFIVLDDVDDLMRLDEWRD 339

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           LL GR + F  GS+V+IT+R+ QLLKN     V   +EV+ L+Y D++ LFS  A     
Sbjct: 340 LLDGRNNSFGSGSKVLITSRNKQLLKN----VVDETYEVEGLNYADAIQLFSSKALKNCI 395

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P      L    +++  G PLAL+VLGS L   S EEW SA+ KL   P   I++ L++S
Sbjct: 396 PTIDQRHLIIKNVRHVQGNPLALKVLGSSLYDKSIEEWRSALKKLALDPQ--IERALRIS 453

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF--SAKIGISRLVGKSLVTISN--- 435
           YDGLD E++ IFLD A FFKG  Q      LD C +  S    IS L+ K L++ +    
Sbjct: 454 YDGLDLEQKPIFLDIAHFFKGRMQGEATGILD-CLYGQSVNFDISTLIDKCLISTAKDYF 512

Query: 436 --NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD-- 489
             +K+ MHDLLQEM   IVR ES   PG+RSRL HP D+ Q+L EN  T    GI+LD  
Sbjct: 513 HRDKLEMHDLLQEMAFNIVRAES-DFPGERSRLSHPPDVVQLLEENKGTQQIKGISLDMS 571

Query: 490 ------SLKELYLGGCSNLK----RFPEISCNIEDLDLKETAIEELPSSIGNL------- 532
                  LK         L+     F   S   + L L  T +E LP+ +          
Sbjct: 572 MLSRQIHLKSDAFAMMDGLRFLNIYFSRYSKEDKILHLPPTGLEYLPNELRYFLWSRFPL 631

Query: 533 ---------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
                      LV+L L   S L  + + + ++ +LRR++LS    L +LP ++   ++L
Sbjct: 632 KSLPPSFRAEHLVELHLRK-SKLVKLWTGVKDVGNLRRIDLSDSPYLTELP-DLSMAKNL 689

Query: 584 EYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             L+L +     ++PSS++ L KL  + L  C  L+S P L
Sbjct: 690 VSLDLTDCPSLTEVPSSLQYLDKLEKIYLFRCYNLRSFPML 730



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 85/155 (54%), Gaps = 27/155 (17%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L+ L L GC  + +FPEIS +IE LDL+ TAI+E+PSSI  L+RL  LD           
Sbjct: 777 LERLCLSGCPEITKFPEISGDIEILDLRGTAIKEVPSSIQFLTRLEVLD----------- 825

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM-KQLSKLSDL 609
                        +SGC KLE LPE    +ESL  L L++   ++IPSS+ K +  L+ L
Sbjct: 826 -------------MSGCSKLESLPEITVPMESLHSLKLSKTGIKEIPSSLIKHMISLTFL 872

Query: 610 RLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNS 643
            L     +++LPELP        H C SL+T+++S
Sbjct: 873 NLDGTP-IKALPELPPSLRYLTTHDCASLETVTSS 906



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 52/167 (31%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFP----------------------EISCNIEDLD 516
           T +P+ +  LD L+++YL  C NL+ FP                       IS N+E L 
Sbjct: 701 TEVPSSLQYLDKLEKIYLFRCYNLRSFPMLDSKVLRFLLISRCLDVTTCPTISQNMEWLW 760

Query: 517 LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
           L++T+I+E+P S+                             L RL LSGC ++ K PE 
Sbjct: 761 LEQTSIKEVPQSVTG--------------------------KLERLCLSGCPEITKFPEI 794

Query: 577 IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            G++E L+    A K+   +PSS++ L++L  L +  C +L+SLPE+
Sbjct: 795 SGDIEILDLRGTAIKE---VPSSIQFLTRLEVLDMSGCSKLESLPEI 838



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 15/186 (8%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           L TG+ ++ +L+ + L     L   P++S   N+  LDL +  ++ E+PSS+  L +L  
Sbjct: 656 LWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNLVSLDLTDCPSLTEVPSSLQYLDKLEK 715

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           + L  C  L+S    + + K LR L +S CL +   P    N+E   +L L +   +++P
Sbjct: 716 IYLFRCYNLRSFP--MLDSKVLRFLLISRCLDVTTCPTISQNME---WLWLEQTSIKEVP 770

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIF 657
            S+    KL  L L  C  +   PE+     I     T++K + +S   LTR     ++ 
Sbjct: 771 QSVT--GKLERLCLSGCPEITKFPEISGDIEILDLRGTAIKEVPSSIQFLTR----LEVL 824

Query: 658 NFSNCS 663
           + S CS
Sbjct: 825 DMSGCS 830



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 12/127 (9%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           +P+ I  L  L+ L + GCS L+  PEI+  +E    L L +T I+E+PSS+  +  ++ 
Sbjct: 811 VPSSIQFLTRLEVLDMSGCSKLESLPEITVPMESLHSLKLSKTGIKEIPSSL--IKHMIS 868

Query: 538 LDLTNCSGLKSVSSRLCNL-KSLRRLNLSGCLKLEKLPEE--IGNLE-SLEYLNLAEKDF 593
           L   N  G  +    L  L  SLR L    C  LE +     IG LE  L++ N  + D 
Sbjct: 869 LTFLNLDG--TPIKALPELPPSLRYLTTHDCASLETVTSSINIGRLELGLDFTNCFKLDQ 926

Query: 594 EKIPSSM 600
           + + ++M
Sbjct: 927 KPLVAAM 933


>gi|356560721|ref|XP_003548637.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 255/702 (36%), Positives = 369/702 (52%), Gaps = 90/702 (12%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSL 62
           SSSS +  P   +DVF++FRG D R NFVSHL  AL    + TF D++ L +G ++   L
Sbjct: 2   SSSSFSTKPQWIYDVFINFRGGDTRRNFVSHLYYALSNAGVNTFFDEENLLKGMQLE-EL 60

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------- 114
           S AIEGS+I+IV+FSE Y  S WCL+EL KI+E    YGQ +VP+FY VDPS        
Sbjct: 61  SRAIEGSQIAIVVFSETYTESSWCLSELEKIVECHETYGQTIVPIFYDVDPSVVRHPTGH 120

Query: 115 ----------------DAGYCPSLGWMGI--------FDIPT--SESVLIEGNVNDISKK 148
                           D  Y  S   + +        +D+    +++ L++  V DI  K
Sbjct: 121 FGDALEAAAQKKYSAKDREYGFSRWKIALAKAANFSGWDVKNHRNKAKLVKKIVEDILTK 180

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L     S  +   +G+E  ++E+   + + ST+   +GIWG+GG GKTTIA AIY+ I  
Sbjct: 181 LDYALLSITEFP-IGLEPRVQEVIGVIENQSTKVCIIGIWGMGGSGKTTIAKAIYNQIHR 239

Query: 209 HFEGSYFMQNIRDESEKVGGLANIHLNFE----------------------RRRLSRMKV 246
            F    F++NIR+  E   G  ++HL  +                       +RLS  + 
Sbjct: 240 RFMDKSFIENIREVCE-TDGRGHVHLQEQLLSDVLKTKEKVRSIGMGTTMIDKRLSGKRT 298

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
            IV  D+ +  Q+  L G    F  GS +IITTRD +LL      +V +V++V ++  N+
Sbjct: 299 FIVLDDVNEFGQLKNLCGNRKWFGQGSVIIITTRDRRLLDQ---LKVDYVYDVDKMDENE 355

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           SL LFS +AF +  P   F EL+  V+ Y  G+PLAL+VLGSYL    +++WES ++KL+
Sbjct: 356 SLELFSWHAFNEAKPKEDFNELARNVVAYCGGLPLALEVLGSYLNERRKKDWESVLSKLE 415

Query: 367 RMPHMDIQKVLKVSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           R+P+  +Q+ L++S+DGL D  E++IFLD  CFF G D+  +   L  C   A IGI+ L
Sbjct: 416 RIPNDQVQEKLRISFDGLSDHMEKDIFLDICCFFIGKDRAYITEILKGCGLHADIGITVL 475

Query: 426 VGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT 484
           + +SL+ +  NNK+ MH LL++MG EI+ + S K+PGKRSRLW  ED+  VL  NT    
Sbjct: 476 IDRSLLKVEKNNKLGMHQLLRDMGREIICESSRKEPGKRSRLWFHEDVLDVLTNNTG-TV 534

Query: 485 GINLDSLKELYLG-GCSNLKRFPEIS-CNIEDLD--------------LKETAIEELPSS 528
            I   +LK  + G  C N   F E+    +  LD              L+  + +  PS 
Sbjct: 535 AIEGLALKLHFAGRDCFNAYAFEEMKRLRLLQLDHVQLTGDYGYLSKQLRWISWQGFPSK 594

Query: 529 -IGN---LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            I N   L  ++ +DL + S L+        LK L+ LNLS    L + P     L +LE
Sbjct: 595 YIPNNFYLEGVIAMDLKH-SNLRLFWKEPQVLKWLKILNLSHSKYLTETP-NFSKLPNLE 652

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
            L L  KD  ++    K +  L +L L N K  ++L  LP G
Sbjct: 653 KLIL--KDCPRLCKVHKSIGDLCNLHLINLKDCKTLGNLPRG 692



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRL 553
           YL    N  + P    N+E L LK+   + ++  SIG+L  L  ++L +C  L ++   +
Sbjct: 638 YLTETPNFSKLP----NLEKLILKDCPRLCKVHKSIGDLCNLHLINLKDCKTLGNLPRGV 693

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             LKS++ L LSGC K++KL E+I  +ESL  L       +++P S+
Sbjct: 694 YKLKSVKTLILSGCSKIDKLEEDIVQMESLTTLIAENTALKQVPFSI 740


>gi|255547496|ref|XP_002514805.1| ATP binding protein, putative [Ricinus communis]
 gi|223545856|gb|EEF47359.1| ATP binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 227/553 (41%), Positives = 312/553 (56%), Gaps = 72/553 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MASS++    I   K+DVFLSFRG+D R NF SHL AALC++ + TF DD+ L RG  IS
Sbjct: 1   MASSAA----IHSWKYDVFLSFRGEDTRKNFTSHLYAALCQKGVITFRDDEELERGKTIS 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
            +L  AI GSKI++++FS  YASS WCL+EL +I + + + GQIV+PVF  V+P +    
Sbjct: 57  QALLQAIHGSKIAVIVFSRDYASSSWCLDELAEIHKCRKEKGQIVMPVFCNVNPYEVRKQ 116

Query: 116 -AGYCPSLG---------------W----------MGIFDIPTSESVLIEGNVNDISKKL 149
            AG+  +                 W           G   +   ES LI+  V ++  KL
Sbjct: 117 AAGFGKAFAKHELRFKNDVQKVQRWRAAISELANLAGWDSLDRHESELIQEIVKEVLSKL 176

Query: 150 SDL-FPSDNKDQLVGVESIIKEIESQLLSGS-TEFNTVGIWGIGGIGKTTIASAIYSNIS 207
                 S      VG+ S + E+   L  G   +   +GI G+GGIGKTTIA  ++  +S
Sbjct: 177 RKTSLESSAAKNFVGMNSRLVEMSMCLDMGQLDDVQFIGICGMGGIGKTTIARFVHEELS 236

Query: 208 SHFEGSYFMQNIRDESEK-------------------------VGGLANIHLNFERRRLS 242
           S FEGS F+ N+R+  EK                          GG+  I       RL+
Sbjct: 237 SQFEGSSFLANVREVEEKRGLVHLQKQLLSEILLDRNITICNAFGGMTEIS-----NRLA 291

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             +VLI+  D+  L Q+ +L G  D F  GSR+I+T+RD  LLK H    V  ++ V+ L
Sbjct: 292 HKRVLIILDDVNQLDQLKMLAGMHDWFGKGSRIIVTSRDEHLLKCH---GVDKIYRVEGL 348

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
             +++L LF   AF  +HP   FLELSN  + Y NG+PLAL V GS+L G S  EW SA+
Sbjct: 349 GRDEALHLFCLKAFRNDHPIEDFLELSNQFVNYCNGLPLALDVFGSFLFGKSLSEWRSAL 408

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           ++LK +P+ +I   L +S+DGL++ E+ +FLD ACFF G D+  V   LD+C      GI
Sbjct: 409 DRLKEIPNQEILDKLNISFDGLEEMEKKLFLDIACFFNGEDRDYVYEVLDSCGLYPDFGI 468

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
           S LV KSL+TIS  +I MHDLLQE+G +IVR+ES ++PGKRSRLW  +DI  VL+ +T  
Sbjct: 469 SVLVSKSLITISKERIWMHDLLQELGRDIVRRESQEEPGKRSRLWLYKDIRHVLSNDTGT 528

Query: 483 PT--GINLDSLKE 493
                I LDS ++
Sbjct: 529 EQIEAIVLDSCEQ 541



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 24/195 (12%)

Query: 465 RLWH---PEDIYQVLNENTSLPTGINLD-----SLKELYLGGCSNLKRFPEISCNIEDLD 516
           RLW    P  + +V++ + S+     +D     +L+ L L GC+   R  E+  ++  L+
Sbjct: 612 RLWKGIKPLKMLKVIDLSYSVNLLKTMDFKDVPNLESLNLEGCT---RLFEVHQSLGILN 668

Query: 517 LKETAIEELPSSIGNLSRLVD-------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
             +  +  + +S   L++L D       L   N + L      L  L+SL+ L+LS C  
Sbjct: 669 RLKLNVGGIATSQLPLAKLWDFLLPSRFLPWKNQNPLAVTLPSLSVLRSLKSLDLSYCNL 728

Query: 570 LE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
           +E  LP ++     L+  NL+  DF  IPSS+ +L+KL D R  +CKRLQ+ P LP  SS
Sbjct: 729 MEGALPNDLSCFPMLKTFNLSGNDFFSIPSSISRLTKLEDFRFADCKRLQAFPNLP--SS 786

Query: 629 I---HARHCTSLKTL 640
           I       CT L++L
Sbjct: 787 ILYLSMDGCTVLQSL 801



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 46/210 (21%)

Query: 464 SRLWH---PEDIYQVLNEN---TSLPTGINLDSLKELYLGGCSNLK-RFP-EISC--NIE 513
           ++LW    P       N+N    +LP+   L SLK L L  C+ ++   P ++SC   ++
Sbjct: 685 AKLWDFLLPSRFLPWKNQNPLAVTLPSLSVLRSLKSLDLSYCNLMEGALPNDLSCFPMLK 744

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL-KSLRRLNLSGCLKLEK 572
             +L       +PSSI  L++L D    +C  L++      NL  S+  L++ GC  L+ 
Sbjct: 745 TFNLSGNDFFSIPSSISRLTKLEDFRFADCKRLQAFP----NLPSSILYLSMDGCTVLQS 800

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR 632
           L                      +P ++ +  KL +L +++CKRLQ  P L   S +H  
Sbjct: 801 L----------------------LPRNISRQFKLENLHVEDCKRLQLSPNLS-SSILH-- 835

Query: 633 HCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
              S+  L++  T  + SS       F NC
Sbjct: 836 --LSVDGLTSQETQTSNSSS----LTFVNC 859


>gi|224109502|ref|XP_002333244.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835789|gb|EEE74224.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1060

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 255/689 (37%), Positives = 365/689 (52%), Gaps = 93/689 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R  F  HL+AAL R++I TF+D++L RG+EIS SL   IE +K+S++
Sbjct: 40  KYDVFLSFRGEDTRVGFTGHLHAALKRKQILTFVDNQLVRGDEISASLLRTIEEAKLSVI 99

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----AG------------- 117
           +FSE YASS+WCL EL KI E +   G IV+PVFY VDPS+    AG             
Sbjct: 100 VFSENYASSKWCLEELAKIFERRRNNGHIVIPVFYQVDPSNVRNQAGSFGDAFARLIKKK 159

Query: 118 ---------YCPSL-------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                    +  +L       GW      P  ES  IE  V D+ KKL  +  S     L
Sbjct: 160 ALTMDKEKSFTDALKDAANLSGWTLRESHP--ESQFIEKIVGDVLKKLHAMSSSHTMAGL 217

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
            G++  + E+ES L   S +   VGIWG+GGIGKTTIA  + S + S FE  +F  N R 
Sbjct: 218 FGIDVRVSEVESLLDMESLDVLIVGIWGMGGIGKTTIAEVVCSKVRSRFERIFF-ANFRQ 276

Query: 222 ESE---------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI----DLL 262
           +S+                  G  +   +F R RL R++ LIV  ++ +L  +    DLL
Sbjct: 277 QSDLRRSFLSWLLGQETLDTMGSLSFRDSFVRDRLRRIRGLIVLDNVDNLMHLEEWRDLL 336

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
             R   F PGS+V+IT+RD Q+L N     V   ++V+ L+   ++ LFS  A     P 
Sbjct: 337 DERNSSFGPGSKVLITSRDKQVLSN----VVDETYKVQGLTDEQAIQLFSSKALKNCIPT 392

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
           +    L   + ++  G PLAL+VLGS L G S EEW SA+NKL + P   I++ L++SYD
Sbjct: 393 SDHRHLIEQIGRHVQGNPLALKVLGSSLYGKSIEEWRSALNKLAQHPQ--IERALRISYD 450

Query: 383 GLDDEEQNIFLDTACFFKGN--DQYLVMNFLDACRFSAKI-GISRLVGKSLVTISNNKIT 439
           GLD E+++IFLD A F   +  ++   +  LD     + I  I+ L+ K L+  S + + 
Sbjct: 451 GLDSEQKSIFLDIAHFLTRSRWEKSRAIRILDVFYGRSVIFDINTLIDKCLINTSPSSLE 510

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSL-KELYL 496
           MHDLL+EM   IVR ES   PG+RSRL HP D+ QVL EN  T    GI++D L + ++L
Sbjct: 511 MHDLLREMAFNIVRAES-DFPGERSRLCHPRDVVQVLEENKGTQQIKGISVDGLSRHIHL 569

Query: 497 G----GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS----------------RLV 536
                   +  RF +    ++ + L  T +E LP+ +  L                  LV
Sbjct: 570 KSDAFAMMDGLRFLDFDHVVDKMHLPPTGLEYLPNKLRYLQWNGFPSKSLPPSFCAEHLV 629

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFE 594
           +LDL   S L  + + + ++ +LRR++LS    L +LP+     NL SL  ++       
Sbjct: 630 ELDLRK-SKLVKLWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNLVSLILVDCPS--LT 686

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           ++PSS++ L KL  + L  C  L+S P L
Sbjct: 687 EVPSSLQYLDKLEKIDLYRCYNLRSFPML 715



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 98/174 (56%), Gaps = 8/174 (4%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L+ L L GCS + +FPE   +IEDLDL  TAI+E+PSSI  L+ L  LD+  CS L+S S
Sbjct: 762 LELLDLSGCSKMTKFPENLEDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCSKLESFS 821

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPE-EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
                +KSL+ LNLS    ++++P     ++ SL +L L     +++P S+K +  L  L
Sbjct: 822 EITVPMKSLQHLNLSKS-GIKEIPLISFKHMISLTFLYLDGTPIKELPLSIKDMVCLQHL 880

Query: 610 RLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            L     +++LPELP     I    C SL+T+++    +   S  W   +F+NC
Sbjct: 881 SLTGTP-IKALPELPPSLRKITTHDCASLETVTS----IINISSLWHGLDFTNC 929



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 51/188 (27%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVD 537
           L TG+ ++ +L+ + L     L   P++S   N+  L L +  ++ E+PSS+  L +L  
Sbjct: 641 LWTGVKDVGNLRRIDLSDSPYLTELPDLSMAKNLVSLILVDCPSLTEVPSSLQYLDKLEK 700

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRL----------------------------------- 562
           +DL  C  L+S    +   K LR L                                   
Sbjct: 701 IDLYRCYNLRSFP--MLYSKVLRYLEINRCLDVTTCPTISQNMELLILEQTSIKEVPQSV 758

Query: 563 -------NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
                  +LSGC K+ K PE   NLE +E L+L+    +++PSS++ L+ L  L +  C 
Sbjct: 759 ASKLELLDLSGCSKMTKFPE---NLEDIEDLDLSGTAIKEVPSSIQFLTSLCSLDMNGCS 815

Query: 616 RLQSLPEL 623
           +L+S  E+
Sbjct: 816 KLESFSEI 823


>gi|356570335|ref|XP_003553345.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1082

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 260/719 (36%), Positives = 373/719 (51%), Gaps = 120/719 (16%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVI 75
           DVFLSFRG+D RH+F  +L  AL    I TFIDDK L RG++IS +L  AIE S+I I++
Sbjct: 17  DVFLSFRGEDTRHSFTGNLYKALSDRGIHTFIDDKKLPRGDQISSALEKAIEESRIFIIV 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG----------- 123
            SE YASS +CLNEL  IL+     G +V+PVFY VDPSD   +  S G           
Sbjct: 77  LSENYASSSFCLNELGYILKFIKGKGLLVLPVFYKVDPSDVRNHAGSFGESLAHHEKKFN 136

Query: 124 ---------------W-MGIFDIPT-----------SESVLIEGNVNDISKKLSDLFPSD 156
                          W M +  +              E   I+  V  +SKK++ + P  
Sbjct: 137 ADKETFKCNLVKLETWKMALHQVANLSGYHFKHGEEYEYKFIQRIVELVSKKINRV-PLH 195

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
             D  VG+ES ++E+++ L  GS +  + +GI G+GG+GKTT+A+A+Y++I+ HFE   F
Sbjct: 196 VADYPVGLESRMQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCF 255

Query: 216 MQNIRDESEKVGGLANIHLNFE-------------------RRRLSRMKVLIVFYDLTDL 256
           ++N+R+ S+K  G+ ++  N                     + RL + K+L++  D+   
Sbjct: 256 LENVRETSKK-HGIQHLQSNLLSETVGEHKLIGVKQGISIIQHRLQQQKILLILDDVDKR 314

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q+  L GR D F  GSRVIITTRD QLL  H   R    +EV EL+   +L L S  AF
Sbjct: 315 EQLQALAGRPDLFGLGSRVIITTRDKQLLACHGVERT---YEVNELNEEHALELLSWKAF 371

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
                   + ++ N    YA+G+PLAL+V+GS L G + E+W SA+++ KR+P+ +IQ++
Sbjct: 372 KLEKVDPFYKDVLNRAATYASGLPLALEVIGSNLYGRNIEQWISALDRYKRIPNKEIQEI 431

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTIS- 434
           LKVSYD L+++EQ++FLD AC FK      V + L A      K  I  LV KSL+ IS 
Sbjct: 432 LKVSYDALEEDEQSVFLDIACCFKKYGLVEVEDILHAHHGHCMKHHIGVLVEKSLIKISC 491

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN----------TSLPT 484
           +  +T+HDL+++MG EIVRQES+K+PGKRSRLW P+DI QVL EN             P 
Sbjct: 492 DGNVTLHDLIEDMGKEIVRQESVKEPGKRSRLWFPKDIVQVLEENKGTSQIEIICMDFPI 551

Query: 485 ---------GINLDSLKEL---------YLGGCSNL---------KRFPEISCNIEDLDL 517
                    G     +K+L         +  G  +L         KR+P  +    D   
Sbjct: 552 FQEIQIEWDGYAFKKMKKLKTLNIRNGHFSKGPKHLPNTLRVLEWKRYPTQNFPY-DFYP 610

Query: 518 KETAIEELPSS----------IGNLSRLVDLDLTN---CSGLKSVSSRLCNLKSLRRLNL 564
           K+ AI +LP S          +   S+ V+L   N   C  L  +    C L  L  L+ 
Sbjct: 611 KKLAICKLPYSGFTSHELAVLLKKASKFVNLTSLNFDYCQYLTHIPDVFC-LPHLENLSF 669

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             C  L  +   +G LE L+ L+       K   +MK L+ L   +L+ C  L+S PE+
Sbjct: 670 QWCQNLSAIHYSVGFLEKLKILDGEGCSRLKSFPAMK-LTSLEQFKLRYCHSLESFPEI 727



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTN 542
           +NL SL   Y   C  L   P++ C  ++E+L  +    +  +  S+G L +L  LD   
Sbjct: 639 VNLTSLNFDY---CQYLTHIPDVFCLPHLENLSFQWCQNLSAIHYSVGFLEKLKILDGEG 695

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           CS LKS  +    L SL +  L  C  LE  PE +G +ES++ L+L E   +K P S   
Sbjct: 696 CSRLKSFPAM--KLTSLEQFKLRYCHSLESFPEILGRMESIKELDLKETPVKKFPLSFGN 753

Query: 603 LSKLSDLRL 611
           L++L  L+L
Sbjct: 754 LTRLQKLQL 762



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 40/195 (20%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRL-- 535
           S P  + L SL++  L  C +L+ FPEI   +E   +LDLKET +++ P S GNL+RL  
Sbjct: 701 SFP-AMKLTSLEQFKLRYCHSLESFPEILGRMESIKELDLKETPVKKFPLSFGNLTRLQK 759

Query: 536 VDLDLTNCSGLK-SVSSRLCNLKSL--RRLNLSGCLKLEKLPEEI-----GNLESLEY-- 585
           + L LT  +G+  S    + +L S+   R  LS   + +   E++      N++ L++  
Sbjct: 760 LQLSLTGVNGIPLSSLGMMPDLVSIIGWRWELSPFPEDDDGAEKVSSTLSSNIQYLQFRC 819

Query: 586 --------------------LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL----P 621
                               L+L    F  IP  +K+   L+ L L  C+ L+ +    P
Sbjct: 820 CNLTDDFFRIVLPWFANVKNLDLPGNSFTVIPECIKECHFLTRLNLNYCEFLREIRGIPP 879

Query: 622 ELPCGSSIHARHCTS 636
            L   S+I  R  TS
Sbjct: 880 NLKYFSAIECRSLTS 894


>gi|357457201|ref|XP_003598881.1| TMV resistance protein N [Medicago truncatula]
 gi|355487929|gb|AES69132.1| TMV resistance protein N [Medicago truncatula]
          Length = 1270

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 215/526 (40%), Positives = 301/526 (57%), Gaps = 67/526 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R + VSHL AAL    I TF+DD KL +G E+ P L  AI+GS+I +V
Sbjct: 129 YDVFINFRGEDTRKSLVSHLYAALSNAGINTFLDDEKLKKGWEVEPELLRAIQGSQICLV 188

Query: 75  IFSEGYASSRWCLNELVKILESK--NKYGQIVVPVFYLVDPS-------DAG-------- 117
           IFSE Y  S WCL ELVKI+E +  N    +V+P+FY VDPS       D G        
Sbjct: 189 IFSEHYTESSWCLVELVKIMEHRKTNNNSPVVIPIFYHVDPSVVRRQVGDFGKALEAITK 248

Query: 118 --YCPS-------------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSD 156
             + P                     GW     I  SES L+   V+++ +KL + F   
Sbjct: 249 RIHPPKERQELLRTWKRALTQAANISGWDS--SIFRSESELVNKIVDEVLRKLENTFLPT 306

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
            +   VG+ES + ++   + + S++ + VGIWG+GG+GKTT A  IY+ I   F    F+
Sbjct: 307 TEFP-VGLESRVDQVMLSIENQSSKVSAVGIWGMGGLGKTTTAKGIYNKIHRKFVHRSFI 365

Query: 217 QNIRDESEKVGG--------LANIHLNFER------------RRLSRMKVLIVFYDLTDL 256
           +NIR   E   G        L+++    E+            +RLS  KVLIV  D+T +
Sbjct: 366 ENIRQTCESDKGYIRLQQQLLSDLFKTKEKIHNIASGTITINKRLSAKKVLIVLDDVTKV 425

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q+  L G       GS +I+TTRD  +L   R   V  V   KE+  N+SL LFS +AF
Sbjct: 426 QQVKALCGNYKCLGLGSVLIVTTRDAHVL---RSLEVDCVCTAKEMDENESLELFSWHAF 482

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
               P A F +LS  V+ Y  G+PLA++VLGSYL   ++EEW+S ++KL+++PH ++Q+ 
Sbjct: 483 RNATPRANFSDLSKNVVNYCGGLPLAVEVLGSYLFERTKEEWKSVLSKLEKIPHEEVQEK 542

Query: 377 LKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-S 434
           LK+SYDGL DD ++ IFLD  CFF G D+  V   L+ C   A IGI+ L+ +SL+ +  
Sbjct: 543 LKISYDGLTDDTKKAIFLDVCCFFIGKDRDYVTEILNGCGLFAGIGIAVLIERSLLKVEK 602

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           NNK+ MHDL+++MG EIVR  S  DPG+RSRLW  ED + VL +NT
Sbjct: 603 NNKLGMHDLIRDMGREIVRGSSTNDPGERSRLWLHEDAHSVLTKNT 648



 Score = 46.2 bits (108), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           LD LK L L     LK  P+ S   N+E L +K+  ++ E+  SIG L +L+ ++L +C+
Sbjct: 742 LDKLKILNLSHSKYLKSTPDFSKLPNLEKLIMKDCPSLSEIHPSIGVLKKLLLINLKDCT 801

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++   +  L S++ L L GC K++KL E+I  ++SL  L  A    ++ P S+
Sbjct: 802 SLGNLPREIYQLISVKTLILFGCSKIDKLEEDIVQMKSLTTLVAANTGVKQAPFSI 857


>gi|359493392|ref|XP_002279365.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1461

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 269/794 (33%), Positives = 403/794 (50%), Gaps = 151/794 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRGKD R+NF SHL  AL    IETFIDD+ L RG EI+P L  AIEGS+I++
Sbjct: 20  RYDVFLSFRGKDTRNNFTSHLYKALDHANIETFIDDEGLPRGEEIAPELLKAIEGSRIAL 79

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL----------- 122
           ++FS+ YA S+WCL+ELVKI+E + + GQ V P+FY V+PS+      +           
Sbjct: 80  IVFSKTYADSKWCLDELVKIMECEKEKGQQVFPIFYHVEPSEVRNQTGIYGEAFNNHERN 139

Query: 123 --------------------GWMGIFDIP-TSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                               G +  F +   SE+  IE  + +I + +  L   D    +
Sbjct: 140 ADEEKKKKKIEQWRTALRKAGNLSGFPLQDRSEAEFIEDIIGEIRRLIPKLV--DVGKNM 197

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++  +K+++S + + S E + VGI+GIGGIGKTTIA  +Y+++   F+   F++N+R+
Sbjct: 198 VGMDGNLKQVKSLIDAQSNEVSMVGIYGIGGIGKTTIAKVVYNDMLYKFKRHSFLENVRE 257

Query: 222 ESEKVGGLANIH----------LNFERRRLSR-----------MKVLIVFYDLTDLKQID 260
           +S+   GL  +            N E R + +            KVLIV  D+   +Q++
Sbjct: 258 KSKGGRGLLELQEKLLCDILMEKNLELRNIDKGIEKIKSECCFEKVLIVLDDVDCPRQLE 317

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L    D F  GS +I+TTR+ + L  +        +E K L+   +  LF  NAF ++H
Sbjct: 318 FLAPNSDCFHRGSIIIVTTRNKRCLNVYESYSS---YEAKGLAREQAKELFCWNAFRKHH 374

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   +++LSN ++ YA G+PLAL VLGS+L     +EWES ++KLK  P  DIQKVL++S
Sbjct: 375 PKDNYVDLSNRILDYAKGLPLALVVLGSFLFQRDVDEWESTLDKLKTNPLEDIQKVLQIS 434

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           YDGLDD+ + +FLD ACFFK  D+  V   L+ C+F  KIG+  L  + L++I+   I M
Sbjct: 435 YDGLDDKCKKLFLDIACFFKYKDEKFVTRILEGCKFHPKIGLRVLDERCLISITYGTIRM 494

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI----NLDSLKEL 494
           HDLLQEMG  IVRQ   + PGK SRLW  +DI  V   N+ T    GI    + D+ K +
Sbjct: 495 HDLLQEMGWAIVRQIDPECPGKWSRLWELQDIESVFTRNKGTKNIEGIFINRSWDTKKRI 554

Query: 495 YL-----------------GGCSNLKRFPEISC-----------------------NIED 514
            L                 G    L +  E+ C                       N+ +
Sbjct: 555 QLTAEAFRKMNRLRLLIVKGNMVQLSQDFELPCHDLVYFHWDNYPLEYLPSNFHVENLVE 614

Query: 515 LDLKETAIEELPSSIGNLS----RLVDLDLT-NCSGLKSVSS---------RLC--NLKS 558
           L+L  + IE L    GN++    ++++L  + +  G+ S+SS         + C  NL  
Sbjct: 615 LNLWYSNIEHLWE--GNMTARKLKVINLSYSMHLVGISSISSAPNLEILILKGCTSNLNG 672

Query: 559 LRRLNLSGCLKLEKLPEE-------------------------IGNLESLEYLNLAE-KD 592
           L +L+L  C  L  LP+                          IG+L++LEYL+L+  ++
Sbjct: 673 LEKLDLGYCKNLLSLPDSIFSLSSLQTLNLFECSKLVGFPGINIGSLKALEYLDLSYCEN 732

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG--SSIHARHCTSLKTLSNSSTLLTRS 650
            E +P+++   S L  L L  C +L+  P++  G  SS+H         L     +   S
Sbjct: 733 IESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHTLSLMGCSKLKGFPDINIGS 792

Query: 651 SKHWDIFNFSNCSN 664
            K   + +FS C N
Sbjct: 793 LKALQLLDFSRCRN 806



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 23/172 (13%)

Query: 478  ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            E   L    +L SLK L LG       FP ++  I D              I +LS LV 
Sbjct: 940  EKDILSGSFHLSSLKILSLGN------FPSMAGGILD-------------KIFHLSSLVK 980

Query: 538  LDLTNCSGLKS-VSSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEK 595
            L LT C   +  + S + NL  L++L+L  C  +E K+   I +L SLE L+L    F  
Sbjct: 981  LSLTKCKPTEEGIPSDIRNLSPLQQLSLHDCNLMEGKILNHICHLTSLEELHLGWNHFSS 1040

Query: 596  IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
            IP+ + +LS L  L L +CK LQ +PELP        HC+    +S+S +LL
Sbjct: 1041 IPAGISRLSNLKALDLSHCKNLQQIPELPSSLRFLDAHCSD--RISSSPSLL 1090



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 9/155 (5%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEIS----CNIEDLDLKETA-IEELPS-SIGNLS 533
           SLP  I +  SL  L L GCS LK FP+I+     ++  L L   + ++  P  +IG+L 
Sbjct: 735 SLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHTLSLMGCSKLKGFPDINIGSLK 794

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-EIGNLESLEYLNLAE-K 591
            L  LD + C  L+S+ + + +L SL  L L GC KL+  P+   G+L++L+ L+ +  +
Sbjct: 795 ALQLLDFSRCRNLESLPNNIGSLSSLHTLLLVGCSKLKGFPDINFGSLKALQLLDFSRCR 854

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
           + E +P S+  LS L  LR+ NC +L+ + E+  G
Sbjct: 855 NLESLPMSIYNLSSLKTLRITNCPKLEEMLEIELG 889



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETA-IEELPS-SIGNLSRLVDLDLT 541
           NL+ L++L LG C NL   P+      +++ L+L E + +   P  +IG+L  L  LDL+
Sbjct: 669 NLNGLEKLDLGYCKNLLSLPDSIFSLSSLQTLNLFECSKLVGFPGINIGSLKALEYLDLS 728

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-EIGNLESLEYLNLAE----KDFEKI 596
            C  ++S+ + + +  SL  L+L GC KL+  P+  IG+  SL  L+L      K F  I
Sbjct: 729 YCENIESLPNNIGSFSSLHTLSLMGCSKLKGFPDINIGSFSSLHTLSLMGCSKLKGFPDI 788

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP 621
             ++  L  L  L    C+ L+SLP
Sbjct: 789 --NIGSLKALQLLDFSRCRNLESLP 811


>gi|356570357|ref|XP_003553356.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1119

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 260/718 (36%), Positives = 372/718 (51%), Gaps = 123/718 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRGKD RH+F  +L  AL    I TFIDDK L RG+EI+ +L  AIE S+I I+
Sbjct: 16  NDVFLSFRGKDTRHSFTGNLYKALSERGINTFIDDKKLPRGDEITSALEKAIEESRIFII 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
           + SE YA S +CLNEL  IL+     G +V+PVFY VDPSD       +  SL +     
Sbjct: 76  VLSENYAWSSFCLNELDYILKFIKGKGLLVLPVFYKVDPSDVRNHTGSFGESLAYHEKKF 135

Query: 125 -------------MGIFDIPT------------SESVLIEGNVNDISKKLSDLFPSDNKD 159
                        M +  +               E   I+  V  +SK+++   P    D
Sbjct: 136 KSTNNMEKLETWKMALNQVANLSGYHHFKHGEEYEYQFIQRIVELVSKRINRA-PLHVAD 194

Query: 160 QLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG+ES I+E++  L  GS +  + VGI G+GGIGKTT+A+AIY++I+ HFE   F++N
Sbjct: 195 YPVGLESRIQEVKMLLDVGSDDVVHMVGIHGLGGIGKTTLAAAIYNSIADHFEALCFLEN 254

Query: 219 IRDESEKVGGLANIHLNFE-------------------RRRLSRMKVLIVFYDLTDLKQI 259
           +R E+ K  GL  +  N                     + RL + KVL++  D+   +Q+
Sbjct: 255 VR-ETSKTHGLQYLQRNLLSETVGEDELIGVKQGISIIQHRLQQKKVLLILDDVDKREQL 313

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             L+GR D F PGSRVIITTRD QLL  H   R    +EV EL+   +L L S  AF   
Sbjct: 314 QALVGRPDLFCPGSRVIITTRDKQLLACHGVKRT---YEVNELNEEYALQLLSWKAFKLE 370

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                + ++ N  + Y+ G+PLAL+V+GS L G + E+W S +++ KR+P+ +IQ++LKV
Sbjct: 371 KVNPCYKDVLNRTVTYSAGLPLALEVIGSNLSGRNIEQWRSTLDRYKRIPNKEIQEILKV 430

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNNKI 438
           SYD L+++EQ++FLD +C  K  D   V + L A      +  I  L+ KSL+ IS+  I
Sbjct: 431 SYDALEEDEQSVFLDISCCLKEYDLKEVQDILRAHYGHCMEHHIRVLLEKSLIKISDGYI 490

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS------LPTGINL---- 488
           T+HDL+++MG EIVR+ES ++PGKRSRLW   DI QVL EN        + T  +L    
Sbjct: 491 TLHDLIEDMGKEIVRKESPREPGKRSRLWLHTDIIQVLEENKGTSQIEIICTDFSLFEEV 550

Query: 489 ------------DSLKEL------YLGGCSNLK---------RFPEISCNIEDLDLKETA 521
                       ++LK L      +  G  +L          R+P  S    D   K+ A
Sbjct: 551 EIEWDANAFKKMENLKTLIIKNGHFTKGPKHLPDTLRVLEWWRYPSQSFP-SDFRPKKLA 609

Query: 522 IEELPSS-----------IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           I +LP+S                 L +L+  +C  L  +    C +  L +L+   C  L
Sbjct: 610 ICKLPNSGYTSLELAVLLKKKFVNLTNLNFDSCQHLTQIPDVSC-VPKLEKLSFKDCDNL 668

Query: 571 EKLPEEIGNLESLEYLNLAE-----KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             + + +G LE L  L+ AE     K+F  I     +L+ L  LRL  C  L+S PE+
Sbjct: 669 HAIHQSVGLLEKLRILD-AEGCSRLKNFPPI-----KLTSLEQLRLGFCHSLESFPEI 720



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 13/129 (10%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDL 540
           T +N DS        C +L + P++SC   +E L  K+   +  +  S+G L +L  LD 
Sbjct: 635 TNLNFDS--------CQHLTQIPDVSCVPKLEKLSFKDCDNLHAIHQSVGLLEKLRILDA 686

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             CS LK+       L SL +L L  C  LE  PE +G +E++ +LNL +   +K P S 
Sbjct: 687 EGCSRLKNFPP--IKLTSLEQLRLGFCHSLESFPEILGKMENIIHLNLKQTPVKKFPLSF 744

Query: 601 KQLSKLSDL 609
           + L++L  L
Sbjct: 745 RNLTRLHTL 753


>gi|15238999|ref|NP_196686.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8953387|emb|CAB96660.1| RPP1 disease resistance protein-like [Arabidopsis thaliana]
 gi|332004269|gb|AED91652.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1189

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 243/722 (33%), Positives = 370/722 (51%), Gaps = 112/722 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SF G+DVR +F+SH+     R  I  F+D+++ RG  I P L  AI GSKI+I++
Sbjct: 62  HQVFPSFSGEDVRRDFLSHIQMEFQRMGITPFVDNEIKRGESIGPELLRAIRGSKIAIIL 121

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------- 115
            S  YASS+WCL+ELV+I++ + +YGQ V+ +FY VDPSD                    
Sbjct: 122 LSRNYASSKWCLDELVEIMKCREEYGQTVMAIFYKVDPSDVKNLTGDFGKVFRKTCAGKP 181

Query: 116 -----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                            AGY  S+ W        +E+ +I+    DIS  L +  PS + 
Sbjct: 182 KKDIGRWRQAWEKVATVAGY-HSINW-------DNEAAMIKKIATDISNILINSTPSRDF 233

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           D LVG+ + +++++  L   + E   +GIWG  GIGKTTIA  +Y+ +S  F+ S FM+N
Sbjct: 234 DGLVGMRAHLEKMKPLLCLDTDEVRIIGIWGPPGIGKTTIARVVYNQLSHSFQLSVFMEN 293

Query: 219 IRDESEKVGG--------------LANI---------HLNFERRRLSRMKVLIVFYDLTD 255
           I+    +  G              ++ I         HL   + RL   KVL+V   +  
Sbjct: 294 IKANYTRPTGSDDYSAKLQLQQMFMSQITKQKDIEIPHLGVAQDRLKDKKVLVVLDGVNQ 353

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
             Q+D +      F PGSR+IITT+D +L + H    + H+++V      ++L +F   A
Sbjct: 354 SVQLDAMAKEAWWFGPGSRIIITTQDQKLFRAHG---INHIYKVDFPPTEEALQIFCMYA 410

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           FGQN P  GF  L+  VI  A  +PL L+++GSY +GMS EEW+ ++ +L+     DIQ 
Sbjct: 411 FGQNSPKDGFQNLAWKVINLAGNLPLGLRIMGSYFRGMSREEWKKSLPRLESSLDADIQS 470

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           +LK SYD LDDE++N+FL  ACFF G +  ++   L       +  ++ L  KSL++ SN
Sbjct: 471 ILKFSYDALDDEDKNLFLHIACFFNGKEIKILEEHLAKKFVEVRQRLNVLAEKSLISFSN 530

Query: 436 -NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-LPTGINLD---- 489
              I MH LL ++GGEIVR +SI +PG+R  L+  E+I  VLN + +   + I +D    
Sbjct: 531 WGTIEMHKLLAKLGGEIVRNQSIHEPGQRQFLFDGEEICDVLNGDAAGSKSVIGIDFHYI 590

Query: 490 -----SLKELYLGGCSNLKRFPEISCN----------------IEDLDLKETAIEELPSS 528
                 + E    G SNL+ F    C+                ++ LD     +  LPS+
Sbjct: 591 IEEEFDMNERVFEGMSNLQ-FLRFDCDHDTLQLSRGLSYLSRKLQLLDWIYFPMTCLPST 649

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYL 586
           + N+  L++L+LT+ S L  +   +  L +LR+++LS  + L++LP+     NL  L   
Sbjct: 650 V-NVEFLIELNLTH-SKLDMLWEGVKPLHNLRQMDLSYSVNLKELPDLSTAINLRKLILS 707

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH-----ARHCTSLKTLS 641
           N +     K+PS +     L DL L  C  L  LP    G +I+      R+C++L  L 
Sbjct: 708 NCSS--LIKLPSCIGNAINLEDLDLNGCSSLVELPSF--GDAINLQKLLLRYCSNLVELP 763

Query: 642 NS 643
           +S
Sbjct: 764 SS 765



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 28/163 (17%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LP  INL+SL  L L  CS LKRFPEIS N+  L L  TAIEE+P SI +  RL +L ++
Sbjct: 906  LPININLESLDILVLNDCSMLKRFPEISTNVRALYLCGTAIEEVPLSIRSWPRLDELLMS 965

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                                         + L E    L+ +  L+L+ K+ +++P  +K
Sbjct: 966  ---------------------------YFDNLVEFPHVLDIITNLDLSGKEIQEVPPLIK 998

Query: 602  QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
            ++S+L  L L+  +++ SLP++P     I A  C SL+ L  S
Sbjct: 999  RISRLQTLILKGYRKVVSLPQIPDSLKWIDAEDCESLERLDCS 1041



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 6/148 (4%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETA-IEELPSSIGNLSR 534
             LP+ I N  +L+EL L  CS+L R P     + N+  LDL   + + ELPSSIGN   
Sbjct: 760 VELPSSIGNAINLRELDLYYCSSLIRLPSSIGNAINLLILDLNGCSNLLELPSSIGNAIN 819

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           L  LDL  C+ L  + S + N  +L+ L L  C  L +LP  IGN  +L Y+NL+   + 
Sbjct: 820 LQKLDLRRCAKLLELPSSIGNAINLQNLLLDDCSSLLELPSSIGNATNLVYMNLSNCSNL 879

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            ++P S+  L KL +L L+ C +L+ LP
Sbjct: 880 VELPLSIGNLQKLQELILKGCSKLEDLP 907


>gi|356532660|ref|XP_003534889.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1036

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 259/725 (35%), Positives = 385/725 (53%), Gaps = 94/725 (12%)

Query: 7   SINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAI 66
           S N     K+DVF+SFRG D+R  F+SHL      ++I  F+DDKL RG EI PSL  AI
Sbjct: 2   SKNNASQTKYDVFVSFRGVDIRRGFLSHLIGTFKSKQINAFVDDKLERGEEIWPSLIEAI 61

Query: 67  EGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG 126
           +GS IS++IFS  YASSRWCL ELV ILE K KYGQIV+P+FY ++P++  +       G
Sbjct: 62  QGSSISLIIFSPDYASSRWCLEELVTILECKEKYGQIVIPIFYHIEPTEVRH-----QRG 116

Query: 127 IFDIPTSESV--------LIEGNVN---DISKKLSDLFPSD------------------- 156
            ++   +E V        +    +N   D+S   S  F  D                   
Sbjct: 117 SYENAFAEHVKKYKSKVQIWRHAMNKSVDLSGIESSKFQDDDELLKEIVKLVLKRLGKHL 176

Query: 157 -NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
            N   LVG++  I +IES +   S +   +GIWG+GGIGKTT+   +++ + S ++GSYF
Sbjct: 177 VNSKGLVGIDKKIADIESLIRKESKDTRLIGIWGMGGIGKTTLPQEVFNKLQSEYQGSYF 236

Query: 216 MQNIRDESEK--------------VGGLANIHL--NFERRRLSRMKVLIVFYDLTDLKQI 259
           + N R++S K              +G +  I    +     + RMKVLIV  D+ D   +
Sbjct: 237 LANEREQSSKDGIISLKKEIFTELLGHVVKIDTPNSLPNDTIRRMKVLIVLDDVNDSDHL 296

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L+G LD F  GSR++ITTRD Q+L     ++   ++ ++E +++ +  LF  NAF Q+
Sbjct: 297 EKLLGTLDHFGAGSRILITTRDEQVLN---ANKADEIYRLREFNFDKAFELFKLNAFNQS 353

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
              + + ELS  V+ YA G+PL L+VL   L+G ++E WES ++KL++MP  ++  ++K+
Sbjct: 354 DNQSEYDELSQRVVNYAKGIPLVLKVLARLLRGKNKEVWESELDKLEKMPLREVCDIMKL 413

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA------CRFSAKIGISRLVGKSLVT- 432
           SY  LD +EQ IFLD ACFF  +   + +++L++         S  +G+ RL  K+L+T 
Sbjct: 414 SYVDLDRKEQQIFLDLACFFLRSQTKITIDYLNSLLKDSESDNSVVVGLERLKDKALITF 473

Query: 433 ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL-----NENTS-----L 482
           + NN I++HD LQEM  EIVRQES  DPG RSRLW  +DIY+ L     NE        L
Sbjct: 474 LENNFISIHDSLQEMACEIVRQESTGDPGSRSRLWDLDDIYEALKNYKGNEAIRSILLHL 533

Query: 483 PTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           PT    +    L+     N  RF E+S   N + LD        L       +R+VD+  
Sbjct: 534 PTTKKENLSPRLF--AKMNRLRFLEVSVEDNYDCLDQLHILGTNLCWPKQQKTRIVDI-- 589

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
               GLK +++    L+ L   + SG    + LP EI + E L  L L     EK+   +
Sbjct: 590 -LAKGLKFLATE---LRFLSWKSYSG----KSLP-EIFSTEKLVILKLPYSGMEKLWLGV 640

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTLSNSSTLLTRSSKHWDIF 657
           K L  L +L L+  K+L+ LP++   +++     R C+ L  +  S   L +  +     
Sbjct: 641 KNLVNLKELDLRCSKKLKELPDISKATNLEVILLRGCSMLTNVHPSIFSLPKLER----L 696

Query: 658 NFSNC 662
           N S+C
Sbjct: 697 NLSDC 701



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 96/185 (51%), Gaps = 9/185 (4%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           L +  +L SL  L L  C NLK+F  +S N+++L L  T ++ LPSS G+ S+L  L L 
Sbjct: 707 LTSNSHLRSLSYLDLDFCKNLKKFSVVSKNMKELRLGCTKVKALPSSFGHQSKLKLLHLK 766

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
             S +K + S   NL  L  L LS C KLE + E    LE+L         +     ++ 
Sbjct: 767 G-SAIKRLPSSFNNLTQLLHLELSNCSKLETIEELPPFLETLN------AQYCTCLQTLP 819

Query: 602 QLSKL-SDLRLQNCKRLQSLPEL-PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
           +L KL   L ++ CK LQSLPEL P    ++AR C SL T+   ST + +  ++     F
Sbjct: 820 ELPKLLKTLNVKECKSLQSLPELSPSLEILNARDCESLMTVLFPSTAVEQLKENRKQVMF 879

Query: 660 SNCSN 664
            NC N
Sbjct: 880 WNCLN 884



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 25/185 (13%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           NL +LKEL L     LK  P+IS   N+E + L+  + +  +  SI +L +L  L+L++C
Sbjct: 642 NLVNLKELDLRCSKKLKELPDISKATNLEVILLRGCSMLTNVHPSIFSLPKLERLNLSDC 701

Query: 544 SGLKSVSSRLCNLKSLRRLNLS--------------------GCLKLEKLPEEIGNLESL 583
             L  ++S   +L+SL  L+L                     GC K++ LP   G+   L
Sbjct: 702 ESLNILTSN-SHLRSLSYLDLDFCKNLKKFSVVSKNMKELRLGCTKVKALPSSFGHQSKL 760

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
           + L+L     +++PSS   L++L  L L NC +L+++ ELP    +++A++CT L+TL  
Sbjct: 761 KLLHLKGSAIKRLPSSFNNLTQLLHLELSNCSKLETIEELPPFLETLNAQYCTCLQTLPE 820

Query: 643 SSTLL 647
              LL
Sbjct: 821 LPKLL 825


>gi|297740985|emb|CBI31297.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 261/670 (38%), Positives = 370/670 (55%), Gaps = 101/670 (15%)

Query: 1   MASSSSSINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEI 58
           MASS++     P+P  +DVFLSFRG+D R NF  HL   L    I TF DD+ L +G +I
Sbjct: 1   MASSAT-----PNPHSYDVFLSFRGEDTRKNFTDHLYNTLVAYGIHTFRDDEELLKGEDI 55

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
              LS AIEGSKI I+IFSE YA+S+WCLNEL  I+E        V+PVFY V PSD G+
Sbjct: 56  KSGLSRAIEGSKIFIIIFSENYAASKWCLNELAMIIEYTTLEDNKVIPVFYHVKPSDVGH 115

Query: 119 CPSLGWMGIF----DIPTSESVLIEGNVNDISK--KLSDLFPSDNK-------------- 158
                 +  F    D    +  LIE     + K  KLS  +  DN+              
Sbjct: 116 QSESFEVAFFNHEKDADQEKKELIEKWRITLKKAAKLSG-YHVDNQHEAEVIQKIREVII 174

Query: 159 -----------DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
                      D +VG++  +K+++S + +   + + VGI+GIGGIGKTTIA A Y++IS
Sbjct: 175 TRLNRKPLYVGDNIVGMDFHLKQLKSLVKTELDDVHMVGIYGIGGIGKTTIAMAFYNDIS 234

Query: 208 SHFEGSYFMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKV 246
           S F+GS F++ + ++S+  GGL  +                      +N  ++RL   +V
Sbjct: 235 SRFDGSSFLRGVGEKSK--GGLLELQKKLFKDILKCESTDFDDTSEGINGIKKRLCSKRV 292

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           LIV  D+ +L+Q++ L G+   +   S +IITT+D  LL  H    V  ++EVKEL++ +
Sbjct: 293 LIVLDDVEELEQLENLAGKNGWYGAKSTIIITTKDTSLLSQHG---VNILYEVKELNHKE 349

Query: 307 SLTLFSRNAFGQN--HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           ++ LF+  AF QN   P   F  LS+ V+ YA G+P+AL+VLG +L G   +EW+SA++K
Sbjct: 350 AIDLFNWWAFKQNIPKPKEDFESLSHCVVGYAKGLPIALKVLGGFLFGKKIDEWKSALHK 409

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           L+++PHM +Q VLKVSY+ LDD E+ IFLD ACFFKG D+ LV   L   R+ A IGI  
Sbjct: 410 LEKIPHMKVQSVLKVSYERLDDTEKEIFLDIACFFKGKDKDLVSRILG--RY-ADIGIKV 466

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT---- 480
           L  + L+TIS NK+ MHDLLQ+MG EIVRQE +K+PGKRSRLW   D+  +L  NT    
Sbjct: 467 LHERCLITISQNKLDMHDLLQQMGQEIVRQECLKEPGKRSRLWDSNDVDSMLTRNTGTEA 526

Query: 481 ------SLPTGINLD-------SLKELYLGGCSNLK---------RFPEISCNIEDLDLK 518
                  +PT   +         +  L L    N +          FP  S  +  L+  
Sbjct: 527 IEGLFVEIPTSNKMQFSTNSFTKMNRLRLFIVYNKRYWNCFKGDFEFP--SSQLRYLNFY 584

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
             ++E LP++  N   LV+LDL   SG+K +        SL+ +NL     L ++P +  
Sbjct: 585 GCSLESLPTNF-NGRNLVELDLVR-SGIKKLWKGDEIFNSLKVINLGYSKYLVEIP-DFS 641

Query: 579 NLESLEYLNL 588
           ++ +LE LNL
Sbjct: 642 SVPNLEILNL 651


>gi|359495221|ref|XP_002274238.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1181

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 271/762 (35%), Positives = 377/762 (49%), Gaps = 151/762 (19%)

Query: 4   SSSSINMIPHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPS 61
           SS+   + P P + DVFLSFRG D R NF  HL   L R  I TF DD  L RG EI PS
Sbjct: 8   SSTRSTLSPFPWRWDVFLSFRGADTRFNFTDHLYKELMRMDIRTFRDDDGLERGGEIQPS 67

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS 121
           L  AIE S  S+V+FS+ YA S+WCL+EL KI+ S+ +  Q+V+PVFY VDPSD      
Sbjct: 68  LLKAIEDSMNSVVVFSQNYAHSKWCLDELDKIMRSRKEKRQMVLPVFYHVDPSDVR---- 123

Query: 122 LGWMGIFDIPTSESVL--------------------------IEGNVNDISKKLSDLFPS 155
               G F   T E VL                          I+  V +I   +S   P 
Sbjct: 124 -KQTGSFGEVTEERVLRWRKALTEAANLAGWHVQEDGYETEAIQKIVQEICDLISVRKPL 182

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
           D  D+L+G+   +K+I S + + S     +GI GIGGIGKTT+A  +Y+     FEG+ F
Sbjct: 183 DLDDKLIGMGPCLKDIASLISNDSDNVRMIGIHGIGGIGKTTLAKIVYNQNFYKFEGACF 242

Query: 216 MQNI--RD----ESEKVGGLA--------NIH--LNFERRRLSRMKVLIVFYDLTDLKQI 259
           + ++  RD    ++E +  L         NI+  +N  + RL   KVL++  D+ D  Q+
Sbjct: 243 LSSVSKRDLLQLQNELLKALTGPYFPSARNIYEGINMIKDRLRFRKVLVILDDIDDQAQL 302

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L  R   F  GSR+I+TTRD +LL+  R      ++EVKEL+  ++L LFS  AF  +
Sbjct: 303 EFLAVRSKWFGSGSRIIVTTRDKRLLQVFR------LYEVKELNSEEALHLFSLYAFMMD 356

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  GF +LS  ++ +  G+PLAL+VLGS L G ++ EWE+ + K++ +    I  VL  
Sbjct: 357 GPQKGFEKLSRCIVDHCEGLPLALKVLGSLLYGRTKPEWENELAKMRNLRSQKIHSVLLR 416

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           S+ GLD   + I LD ACFFKG D   V   L+AC F A  GI  L  K+L+++SN+K+ 
Sbjct: 417 SFHGLDRTNRRILLDIACFFKGEDIKFVREILEACNFCAHPGIRILNEKALISVSNDKLL 476

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKELY 495
           MHDL+Q+MG +IVR++   +PGK SRLW PEDIY VL  NT      GI LD  + KE++
Sbjct: 477 MHDLIQQMGWDIVREKYPDEPGKWSRLWDPEDIYHVLTTNTGTQAIEGIFLDMSASKEIH 536

Query: 496 LGGCS--------------NLK------------RFP---------------EISCNIE- 513
           L   +              NLK            +FP                +  N   
Sbjct: 537 LTTDAFKKMKKLRLLRVYHNLKNISDTIHLPQDFKFPSHELRYLHWDGWTLESLPSNFHG 596

Query: 514 ----DLDLKETAIEELPSSIGNLSRLVDLDLTN-----------------------CSGL 546
               +L LK ++I+ L      L +L  ++L+N                       C+ L
Sbjct: 597 EKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHVKRLILDGCTSL 656

Query: 547 KSVSSRLCNLKSLRRLNLSGCL-----------------------KLEKLPEEIGNLESL 583
             V   +  LK L  LN+  C                        KL+K PE  G +E L
Sbjct: 657 LEVHPSVAKLKRLTILNMKNCKMLHHFPSITGLESLKVLNLSGCSKLDKFPEIQGYMEYL 716

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             LNL      ++PSS+  L +L  L ++NCK L+ LP   C
Sbjct: 717 SELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNIC 758



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            P+   L+SLK L L GCS L +FPEI   +E   +L+L+ TAI ELPSS+  L +LV L
Sbjct: 683 FPSITGLESLKVLNLSGCSKLDKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSL 742

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           D+ NC  LK + S +C+LKSL  L  SGC  LE  PE +  +ESL+ L L     +++P 
Sbjct: 743 DMKNCKNLKILPSNICSLKSLETLVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPP 802

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPC 625
           S+  L  L  L L+ CK L+SLP   C
Sbjct: 803 SIVHLKGLQLLSLRKCKNLRSLPNSIC 829



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 4/138 (2%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP+ I +L SL+ L   GCS L+ FPEI   +E L    L  T+I+ELP SI +L  L  
Sbjct: 753 LPSNICSLKSLETLVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQL 812

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L  C  L+S+ + +C+L+SL  L +SGC  L KLPEE+G+L+ L  L        + P
Sbjct: 813 LSLRKCKNLRSLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPP 872

Query: 598 SSMKQLSKLSDLRLQNCK 615
            S+  L  L +L  + CK
Sbjct: 873 FSLVHLRNLKELSFRGCK 890



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 100/215 (46%), Gaps = 33/215 (15%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE---TAIEELPSSIGNLSRLV 536
            SLP  I +L SL+ L + GCSNL + PE   +++ L + +   TAI + P S+ +L  L 
Sbjct: 823  SLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLK 882

Query: 537  DLDLTNCSGLKSVS----------------------SRLCNLKSLRRLNLSGC-LKLEKL 573
            +L    C G  S S                        L  L SL+ L+LSGC L    +
Sbjct: 883  ELSFRGCKGSTSNSWISSLVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSI 942

Query: 574  PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
             + +G L  LE LNL+  +   +P  + +LS L  L +  CK LQ + +LP    S+ A 
Sbjct: 943  NDNLGRLRFLEELNLSRNNLVMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAG 1002

Query: 633  HCTSLKTLSNSST-----LLTRSSKHWDIFNFSNC 662
             C SL+ LS  S      L + S  H   F  SNC
Sbjct: 1003 DCISLEFLSIPSPQSPQYLSSSSCLHPLSFKLSNC 1037


>gi|224144411|ref|XP_002325281.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|224145731|ref|XP_002325746.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862156|gb|EEE99662.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862621|gb|EEF00128.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 526

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 213/522 (40%), Positives = 303/522 (58%), Gaps = 66/522 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+NF  HL AAL +  I TF D ++L  G EIS  LS AI  S+IS+V
Sbjct: 10  YDVFLSFRGADTRNNFTDHLYAALDQAGIYTFRDGNELPPGQEISSQLSRAIRESRISVV 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------------------- 114
           +FS+GYASSRWCL+ELVKILE ++  GQ++VP+FY +DPS                    
Sbjct: 70  VFSKGYASSRWCLDELVKILECRHAMGQLLVPIFYDIDPSYVRKQKWNVGEALKRKEEDF 129

Query: 115 ---------------DAGYCPSLGWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPS--D 156
                          +AG     GW+ + D+    ES  I+  V D+  KL    P   D
Sbjct: 130 EIEMERLKRWREALDEAGNIS--GWI-LKDMANGYESKFIQKIVEDLLHKLG---PKCLD 183

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
                VG+ES +  I   L   S +   VG++G+ GIGKTTIA A+++ +   FEGS F+
Sbjct: 184 VAKYPVGIESRVDYIIDLLSIHSNDVRVVGVYGMPGIGKTTIAKAVFNQLCHGFEGSSFI 243

Query: 217 QNIRDESEK--------------VGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQID 260
            N+++++ +                 + N+   +N  + R    +VL+V  D   LKQ++
Sbjct: 244 SNVKEKTVEQLQEQLLCDILKPNTWKIDNVSKGVNLMKDRFRNKRVLVVLDDFDQLKQLE 303

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+   + F PGSR++ITTRD  LL       V   + VKEL  ++SL LFS +AF   H
Sbjct: 304 ALVRERNCFGPGSRIVITTRDEHLLTQ---IEVDGKYHVKELHQHESLQLFSLHAFKDTH 360

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   ++ELSN ++ YA GVPLAL+VLGSYL   +   W+SA+ KL+++P+  IQK L++S
Sbjct: 361 PEEDYVELSNAIVDYAGGVPLALEVLGSYLFRRNISVWKSAIKKLRKIPNRQIQKTLRIS 420

Query: 381 YDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKI 438
           +D LDD++ + +FLD ACFF G D+  V+  LD   F   IGI  L+ +SL++I++ N++
Sbjct: 421 FDTLDDDKVKAMFLDIACFFIGWDKEYVVEILDGRGFFPDIGIDILIQRSLLSINDENEL 480

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            MHDL+++MG EI R+ S   PGKR+R+W  ED   VLN  T
Sbjct: 481 NMHDLIRDMGREIAREVSYDHPGKRNRIWLLEDALDVLNNQT 522


>gi|357517699|ref|XP_003629138.1| TMV resistance protein N [Medicago truncatula]
 gi|355523160|gb|AET03614.1| TMV resistance protein N [Medicago truncatula]
          Length = 1084

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 242/685 (35%), Positives = 364/685 (53%), Gaps = 81/685 (11%)

Query: 13  HPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           HP  +DVF++FRGKD R++FVSHLNAAL    I+TF+DD KL +G ++ P L  AIEGS 
Sbjct: 7   HPWIYDVFINFRGKDTRNDFVSHLNAALQNRGIKTFLDDEKLGKGEKLGPQLEKAIEGSL 66

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAGYCPSLG 123
           ISIV+ S  YA S WCLNELV IL+ +  YGQ+V+PVFY VDPS       D G    L 
Sbjct: 67  ISIVVLSPDYAESSWCLNELVHILKCQKTYGQVVMPVFYHVDPSVVRKQTGDFGKALELT 126

Query: 124 -------WMGIFDIPTSESVLIEG-------NVNDISK-------KLSDLFPSDNKDQLV 162
                   +  +     +   I G       N  +++K       K+ D+         +
Sbjct: 127 ATKKEDKLLSNWKTALKQVATIAGWDCYNIRNKGELAKQIVEAILKILDISLLSITKYPI 186

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG-SYFMQNIRD 221
           G+ES +++I   + + S +   +GIWG+GG GKTT A AIY+ I   FEG + F ++IR+
Sbjct: 187 GLESRVQKITKFIDNQSNKVCMIGIWGMGGSGKTTTAKAIYNKIHRRFEGRTSFFESIRE 246

Query: 222 ESEKVG-------------------GLANIHLNFER--RRLSRMKVLIVFYDLTDLKQID 260
             +                       + +I L   +  +RL   K  IV  D+T  +Q+ 
Sbjct: 247 VCDNNSRGVIHLQQQLLLDLLQIKQEIHSIALGMTKIEKRLRGQKAFIVLDDVTTPEQLK 306

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L      F  GS +IITTRD +LL +       H+F + E+    SL LF  +AF Q +
Sbjct: 307 ALCADPKLFGSGSVLIITTRDARLLNSLSDD---HIFTMTEMDKYQSLELFCWHAFQQPN 363

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P  GF EL+  V+ Y  G+PLAL+VLGSYL    + EW+SA++KL+++P+  +Q+ L++S
Sbjct: 364 PREGFCELTKKVVAYCGGLPLALEVLGSYLSMRKKLEWKSALSKLEKIPNNQVQQKLRIS 423

Query: 381 YDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKI 438
           YDGL+D  E++IFLD  CFF G ++  V   L+ C   A IGI  L+ +SL+ +  NNK+
Sbjct: 424 YDGLEDYTEKDIFLDICCFFIGKNRADVTEILNGCGLHADIGIVVLIERSLIKVDKNNKL 483

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT-------------- 484
            MHDLL++MG  IV + S+K+P K SRLW  +D+  VL++ T   T              
Sbjct: 484 QMHDLLRDMGRAIVGEISVKEPAKHSRLWFHDDVLDVLSKKTGTDTIEGMILKCQRTGRI 543

Query: 485 --GIN----LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
             G N    +  L+ L L G   +  +  IS  +  +D + +  + +P+   +L  LV  
Sbjct: 544 IFGTNSFQEMQKLRLLKLDGVHLMGDYGLISKQLRWVDWQRSTFKFIPNDF-DLENLVVF 602

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
           +L +   ++ V      L  L+ LNLS    L+  P +   L +LE L + + +   ++ 
Sbjct: 603 ELKH-GNVRQVWQETKLLDKLKILNLSHSKYLKSTP-DFAKLPNLEKLIMKDCQSLSEVH 660

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE 622
           +S+  L  L  +  ++C  L +LP+
Sbjct: 661 TSIGDLKNLLLINFKDCTSLGNLPK 685



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 73/127 (57%), Gaps = 3/127 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           LD LK L L     LK  P+ +   N+E L +K+  ++ E+ +SIG+L  L+ ++  +C+
Sbjct: 619 LDKLKILNLSHSKYLKSTPDFAKLPNLEKLIMKDCQSLSEVHTSIGDLKNLLLINFKDCT 678

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L ++   +  ++S++ L LSGC  ++KL E+I  +ESL  L  A    +++P S+ +  
Sbjct: 679 SLGNLPKEVYKVRSVKSLILSGCSMIDKLEEDILQMESLTTLIAANTGIKQVPYSIARSK 738

Query: 605 KLSDLRL 611
            ++ + L
Sbjct: 739 SIAYISL 745


>gi|357449965|ref|XP_003595259.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
 gi|355484307|gb|AES65510.1| Disease resistance-like protein GS4-1 [Medicago truncatula]
          Length = 1061

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 263/713 (36%), Positives = 375/713 (52%), Gaps = 104/713 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+ F   L  +L ++ I TFID+K + +G EI+PSL  AI+ S+I IV
Sbjct: 55  YDVFLSFRGIDTRNTFTGSLYNSLDQKGIHTFIDEKEIQKGEEITPSLLQAIQQSRIYIV 114

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS  YASS +CLNELV ILE  N   ++++PVFY VDPS        Y  +L       
Sbjct: 115 VFSSNYASSTFCLNELVMILECSNTRRRLLLPVFYDVDPSQVRHQRGAYGEALRKHEERF 174

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW   F   +       GN+ ++  K  +  P    +  
Sbjct: 175 SDDKDKVQKWRDALCQAANISGWH--FQHGSQPEYKFIGNIVEVVAKKINRTPLHVVENP 232

Query: 162 VGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN-ISSHFEGSYFMQNI 219
           V +ES + E+ S L  GS E  N VGI+G GG+GK+T+A A+Y+N IS  F+G  F+ +I
Sbjct: 233 VALESPVLEVASLLGFGSDERANIVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLADI 292

Query: 220 RDESEKVG-------------GLANIH-------LNFERRRLSRMKVLIVFYDLTDLKQI 259
           R  +   G             G  +I        ++  +RRL R KVL+V  D+   KQI
Sbjct: 293 RRSAINHGLVQLQETLLSDILGEEDIRVRDVYRGISIIKRRLQRKKVLLVLDDVDKAKQI 352

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L G  D F  GS++IITTRD  LL     + +  V+EVKEL++  SL LFS +AF   
Sbjct: 353 QVLAGGHDWFGSGSKIIITTRDKHLLAI---NGILSVYEVKELNHEKSLELFSWHAFINR 409

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                +  +SN  + YA+G+P+AL+V+GS+L G S + W+S+++K +++ H DI +VLKV
Sbjct: 410 KIDPSYRSISNRAVSYAHGLPIALEVIGSHLIGQSLDVWKSSLDKYEKVLHKDIHEVLKV 469

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKI 438
           SYD LD++++ IFLD ACF+   +       L    FSA+ GI  L  KSL+ I  N  +
Sbjct: 470 SYDDLDEDDKGIFLDIACFYNSYEMSYAKEMLYLHGFSAENGIQVLTDKSLIKIDVNGCV 529

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKEL 494
            MHDL+Q+MG EIVRQES  +PG+RSRLW  +DI  VL ENT   T     INL + KE+
Sbjct: 530 RMHDLVQDMGREIVRQESSVEPGRRSRLWFDDDIIHVLEENTGTDTIEVIIINLCNDKEV 589

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS---- 550
           +  G    K F ++  N++ L ++     + P  + N  R++D      SG  S S    
Sbjct: 590 HWSG----KAFKKMK-NLKILIIRSARFSKDPQKLPNSLRVLDW-----SGYPSQSLPGD 639

Query: 551 -------------SRLCNLKSLRR------LNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
                        S L + KSL+       L+  GC  L +LP  +  L +L  L L + 
Sbjct: 640 FNPKKLMILSLHESSLVSFKSLKVFESLSFLDFEGCKLLTELP-SLSGLVNLGALCLDDC 698

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTL 640
            +   I  S+  L+KL  L  Q C +L+ L     LP   S+  R C+ LK+ 
Sbjct: 699 TNLITIHRSVGFLNKLMLLSTQRCNQLKLLVPNINLPSLESLDMRGCSRLKSF 751



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            +SL  L   GC  L   P +S   N+  L L + T +  +  S+G L++L+ L    C+
Sbjct: 664 FESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLITIHRSVGFLNKLMLLSTQRCN 723

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK +   + NL SL  L++ GC +L+  PE +G +E++  + L +   +K+P S+  L 
Sbjct: 724 QLKLLVPNI-NLPSLESLDMRGCSRLKSFPEVLGVMENIRDVYLDQTSIDKLPVSIGNLV 782

Query: 605 KLSDLRLQNCKRLQSLPE 622
            L  L L+ CK L  LP+
Sbjct: 783 GLERLFLRECKSLTQLPD 800



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIG 530
           Q  N+   L   INL SL+ L + GCS LK FPE+     NI D+ L +T+I++LP SIG
Sbjct: 720 QRCNQLKLLVPNINLPSLESLDMRGCSRLKSFPEVLGVMENIRDVYLDQTSIDKLPVSIG 779

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
           NL  L  L L  C  L  +   +  L  L  + +  C
Sbjct: 780 NLVGLERLFLRECKSLTQLPDSIRILPKLGIIMVYDC 816


>gi|356506541|ref|XP_003522038.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 913

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 253/687 (36%), Positives = 369/687 (53%), Gaps = 104/687 (15%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSK 70
           IP  K+DVF+SFRG+D+RH F+ +L  A  +++I  FIDDKL +G+EI PSL  AI+GS 
Sbjct: 58  IPQIKYDVFVSFRGEDIRHGFLGYLTEAFHQKQIHAFIDDKLEKGDEIWPSLVGAIQGSL 117

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY------------ 118
           IS+ IFSE Y+SSRWCL ELVKI+E +  YGQ V+PVFY V+P+D  +            
Sbjct: 118 ISLTIFSENYSSSRWCLEELVKIIECRETYGQTVIPVFYHVNPTDVRHQKGSYEKALSEH 177

Query: 119 ------------------CPSLGWMGIFDIPTSESVLIEG-NVNDISKKLSDLFPSDNKD 159
                                L  +  FD  T   +L E  N+ ++     D  P   K 
Sbjct: 178 EKKYNLTTVQNWRHALKKAADLSGIKSFDYKTEVELLGEIINIVNLELMRLDKNPVSLKG 237

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            L+G++  I+ +ES L   S+    +GIWG+GGIGKTTIA  I + + S ++G  F  N+
Sbjct: 238 -LIGIDRSIQYLESMLQHESSNVRVIGIWGMGGIGKTTIAQEILNKLCSGYDGYCFFVNV 296

Query: 220 RDESEKVGGL-------------------ANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           ++E  + G +                   AN   N+ +R++ RMKVLIV  D+ D   ++
Sbjct: 297 KEEIRRHGIITLKEIFFSTLLQENVKMITANGLPNYIKRKIGRMKVLIVLDDVNDSDLLE 356

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G  D F PGSR+I+TTRD Q+L  ++   V  +++V  L+ +++L LF  +AF Q H
Sbjct: 357 KLFGNHDWFGPGSRIILTTRDKQVLIANK-VHVDDIYQVGVLNPSEALELFILHAFNQKH 415

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
               + +LS  V+ YA G+PL L+VLG  L G  +E WES ++KLK MP+ D+   +++S
Sbjct: 416 FDMEYYKLSKRVVCYAKGIPLVLKVLGGLLCGKDKEVWESQLDKLKNMPNTDVYNAMRLS 475

Query: 381 YDGLDDEEQNIFLDTACFFKGND---QYLVMNFLDACR-FSAKIGISRLVGKSLVTISN- 435
           YD LD +EQ IFLD ACFF G D     + +   D  R  S  +G+ RL  KSL+TIS  
Sbjct: 476 YDDLDRKEQKIFLDLACFFIGLDVKVDLIKVLLKDNERDNSVVVGLERLKDKSLITISKY 535

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSL 491
           N + MHD++QEMG EIVRQESI+DPG RSRLW  +DIY+VL  N    +      +L ++
Sbjct: 536 NIVYMHDIIQEMGWEIVRQESIEDPGSRSRLWDADDIYEVLKNNKGTESIRSIRADLSAI 595

Query: 492 KELYLG------------------GCSN----------------------LKRFPE--IS 509
           +EL L                   GC +                      LK  PE   +
Sbjct: 596 RELKLSPDTFTKMSKLQFLYFPHQGCVDNFPHRLQSFSVELRYFVWRYFPLKSLPENFSA 655

Query: 510 CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
            N+  LDL  + +E+L   + NL  L ++ ++    LK + + L    +L  L++S C +
Sbjct: 656 KNLVLLDLSYSRVEKLWDGVQNLKNLKEVKVSGSKNLKELPN-LSEATNLEVLDISACPQ 714

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKI 596
           L  +   I +L  L+ + L  + F ++
Sbjct: 715 LASVIPSIFSLNKLKIMKLNYQSFTQM 741



 Score = 39.3 bits (90), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 26/172 (15%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEELPS---SIGNLSRLVDLDLT 541
           NL +LKE+ + G  NLK  P +S   N+E LD+  +A  +L S   SI +L++L  + L 
Sbjct: 677 NLKNLKEVKVSGSKNLKELPNLSEATNLEVLDI--SACPQLASVIPSIFSLNKLKIMKLN 734

Query: 542 NCSGLKSV---------------SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
             S  + +               S++   L S+    L  C+  ++ P        LE  
Sbjct: 735 YQSFTQMIIDNHTSSISFFTLQGSTKQKKLISVTSEELISCVCYKEKPSSFVCQSKLEMF 794

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLK 638
            + E D  ++PSS   L +   LR+ + + L  +       S+    C SLK
Sbjct: 795 RITESDMGRLPSSFMNLRRQRYLRVLDPRELLMIE----SGSVDVIDCKSLK 842


>gi|147841678|emb|CAN73064.1| hypothetical protein VITISV_003258 [Vitis vinifera]
          Length = 1567

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 256/752 (34%), Positives = 378/752 (50%), Gaps = 156/752 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  LS AIE       
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLSRAIE------- 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVV-PVFYLVDPSD-----AGYCPSLG----- 123
                   SRWCLNELVKI+E K++   +V+ P+FY VDPSD       +  +L      
Sbjct: 73  -------ESRWCLNELVKIIERKSQKESVVLLPIFYHVDPSDVRNQRGSFGDALACHERD 125

Query: 124 -----------W----------MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                      W           G       E+ +++  VN I ++L+    S  K+ +V
Sbjct: 126 ANQEKKEMIQKWRIALRKAANLCGCHVDDQYETEVVKEIVNTIIRRLNHQPLSVGKN-IV 184

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G+   +++++S + +   +   +GI G GG+GKTTIA AIY+ IS  ++GS F++N+R+ 
Sbjct: 185 GISVHLEKLKSLMNTELNKVRVIGICGTGGVGKTTIAKAIYNEISCQYDGSSFLKNMRER 244

Query: 223 SE-----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           S+                 K   + N+   ++  +R LS  +VLI+FYD+ +LKQ++ L 
Sbjct: 245 SKGDILQLQQELLHGILRGKFFKINNVDEGISMIKRCLSSNRVLIIFYDVDELKQLEYLA 304

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
              D F   S +IIT+RD  +L  +    V   +EV +L+  +++ LFS  AF QNHP  
Sbjct: 305 EEKDWFQAKSTIIITSRDKHVLARYG---VDIPYEVSKLNKEEAIELFSLWAFKQNHPKK 361

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
            +  LS  +I YANG+PLAL+VLG+ L G    EWESA+ KLK +PHM+I  VL++S+DG
Sbjct: 362 VYKNLSYNIIDYANGLPLALKVLGASLFGKKISEWESALCKLKIIPHMEIHNVLRISFDG 421

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDL 443
           LDD ++ IFLD ACFFKG+D+  V   L A    AK GI+ L  + L+T+S N + MHDL
Sbjct: 422 LDDIDKGIFLDVACFFKGDDKDFVSRILGA---HAKHGITTLDDRCLITVSKNMLDMHDL 478

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL--------------PTGINLD 489
           +Q+MG EI+RQE  KDPG+RSRLW   + Y VL  NT                P+ +  +
Sbjct: 479 IQQMGWEIIRQECPKDPGRRSRLW-DSNAYHVLMRNTGTRAIEGLFLDRCKFNPSHLTTE 537

Query: 490 SLKE---LYLGGCSNLKR--------------------------FPEISC-------NIE 513
           S KE   L L    N +R                          +P  S        N+ 
Sbjct: 538 SFKEMNKLRLLKIHNPRRKLFLENHLPRDFEFSSYELRYLHWDGYPLKSLPMNFHAKNLV 597

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL----- 568
           +L L+++ I+++        +L  +DL++   L  +     ++ +L  L L GC+     
Sbjct: 598 ELSLRDSNIKQVWKGNKLHDKLRVIDLSHSVHLIRIPG-FSSVPNLEILTLEGCVSLELL 656

Query: 569 -------------------KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
                              KLE+ PE  GN+  L  L+L+      +PSS+  L+ L  L
Sbjct: 657 PRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTL 716

Query: 610 RLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
            L+ C +L  +P   C       H +SLK L+
Sbjct: 717 LLEECSKLHKIPSYIC-------HLSSLKVLN 741



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 87/148 (58%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP GI     L+ L   GCS L+RFPEI  N+  L   DL  TAI +LPSSI +L+ L  
Sbjct: 656 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQT 715

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKI 596
           L L  CS L  + S +C+L SL+ LNL  C  +E  +P +I  L SL+ LNL    F  I
Sbjct: 716 LLLEECSKLHKIPSYICHLSSLKVLNLGHCNMMEGGIPSDICYLSSLQKLNLEGGHFSSI 775

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P ++ QLS+L  L L +C  L+ +PELP
Sbjct: 776 PPTINQLSRLKALNLSHCNNLEQIPELP 803



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 103/209 (49%), Gaps = 39/209 (18%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            TSLP+ I    SL  L   GCS L+ FPEI  ++E L    L  TAI+E+PSSI  L R+
Sbjct: 1110 TSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLFLDGTAIKEIPSSIQRL-RV 1168

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD--- 592
            +   L     L ++   +CNL S + L +  C   +KLP+ +G L+SL +L++   D   
Sbjct: 1169 LQYLLLRSKNLVNLPESICNLTSFKTLVVESCPNFKKLPDNLGRLQSLLHLSVGPLDSMN 1228

Query: 593  ------------------------------FEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                                          F +IP  + QL  L DL L +CK LQ +PE
Sbjct: 1229 FQLPSLSGLCSLRALNLQGCNLKGISQGNHFSRIPDGISQLYNLEDLDLGHCKMLQHIPE 1288

Query: 623  LPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
            LP G   + A HCTSL+ LS+ S LL  S
Sbjct: 1289 LPSGLWCLDAHHCTSLENLSSQSNLLWSS 1317



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 14/131 (10%)

Query: 510  CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
            C  +D D+ E  I E PS + +L       L +C  L S+ S +   KSL  L+ SGC +
Sbjct: 1079 CCFKDSDMNEVPIIENPSELDSLC------LRDCRNLTSLPSSIFGFKSLATLSCSGCSQ 1132

Query: 570  LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
            LE  PE + ++ESL  L L     ++IPSS+++L  L  L L++ K L +LPE  C    
Sbjct: 1133 LESFPEILQDMESLRKLFLDGTAIKEIPSSIQRLRVLQYLLLRS-KNLVNLPESIC---- 1187

Query: 630  HARHCTSLKTL 640
               + TS KTL
Sbjct: 1188 ---NLTSFKTL 1195


>gi|84313510|gb|ABC55465.1| TIR-NBS disease resistance-like protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa var. truncata]
 gi|84313512|gb|ABC55466.1| TIR-NBS disease resistance-like protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa var. truncata]
          Length = 642

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 213/549 (38%), Positives = 311/549 (56%), Gaps = 68/549 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           MA   SS   IP   +DVFLSFRG+D R  F  HL AAL    I TF+DD +L RG EIS
Sbjct: 1   MAEPESS-RSIPEGDYDVFLSFRGEDTRKTFTGHLYAALDDAGIRTFLDDNELPRGEEIS 59

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPSD--- 115
             L  AI  SKISIV+FS+GYASSRWCLNELV+IL+ K  K GQIV+P+FY +DPSD   
Sbjct: 60  EHLLKAIRESKISIVVFSKGYASSRWCLNELVEILKCKRKKTGQIVLPIFYDIDPSDVRK 119

Query: 116 --AGYCPSL--------------------------GWMGIFDIPTS-ESVLIEGNVNDIS 146
               +  +                           GW  + D+    E+  I+  + D+ 
Sbjct: 120 QTGCFAEAFDKHEECFEEKLVKEWRKALEDAGNLSGW-NLNDMANGHEAKSIKAIIKDVV 178

Query: 147 KKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
            KL   +     + LVG++ +  +I   L + + +   VGI G+ GIGKTT+A  +++ +
Sbjct: 179 NKLEPKYLY-VPEHLVGMDPLAHDIYDFLSTATDDVRIVGIHGMSGIGKTTLAKVVFNQL 237

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIH------------LNFE---------RRRLSRMK 245
            + FEGS F+ +I + S++  GLA +              NF+         + R+ R +
Sbjct: 238 CNGFEGSCFLSDINETSKQFNGLAGLQKQLLRDILKQDVANFDCVDRGKVLIKERIRRKR 297

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VL+V  D+   +Q++ L+G    F PGSRVIITTRD  +L      +    ++++EL   
Sbjct: 298 VLVVADDVAHPEQLNALMGERSWFGPGSRVIITTRDSSVL-----LKADQTYQIEELKPY 352

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           +SL LF  +A     P   ++ELS   + Y  G+PLAL+V+G+ L G + + W+S ++KL
Sbjct: 353 ESLQLFRWHALRDTKPTEDYIELSKDAVDYCGGIPLALEVMGACLSGKNRDGWKSVIDKL 412

Query: 366 KRMPHMDIQKVLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGIS 423
           +R+P+ DIQ  L++S+D LD EE QN FLD ACFF    +  V   L A C ++ ++ + 
Sbjct: 413 RRIPNRDIQGKLRISFDALDGEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLE 472

Query: 424 RLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--T 480
            L  +SL+ ++   KITMHDLL++MG EIVR+ S K+PGKR+R+W+ ED + VL +   T
Sbjct: 473 TLRERSLIKVNGFGKITMHDLLRDMGREIVRESSPKEPGKRTRIWNQEDAWNVLEQQKGT 532

Query: 481 SLPTGINLD 489
            +  G+ LD
Sbjct: 533 DVVEGLTLD 541


>gi|359493269|ref|XP_003634556.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1299

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 266/768 (34%), Positives = 377/768 (49%), Gaps = 168/768 (21%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF G+D RHNF  HL  AL R+ I TF D ++L +G EI+P L  AIE S+I ++
Sbjct: 25  YDVFLSFMGEDTRHNFTDHLYRALNRKGIRTFRDAEELRKGEEIAPELLKAIEKSRICLI 84

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           I S+ YA SRWCL ELVKI+E +   GQ+V P+FY VDPSD       Y  +        
Sbjct: 85  ILSKNYARSRWCLEELVKIMERRQSMGQLVFPIFYHVDPSDVRRQTGSYEQAFERHERNP 144

Query: 123 -----------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                            GW  + D   SE+  IE   + I  + S      +K +L+G++
Sbjct: 145 DQIQRWRAALREVGSLSGW-HVHD--WSEADYIEDITHVILMRFSQKILHVDK-KLIGMD 200

Query: 166 SIIKEIESQLLSG----STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
             + ++E          S +   VGI+G GGIGKTTIA  +Y+ IS+ F  + F+ N+R+
Sbjct: 201 YRLDQLEENFPQIIDLLSNDVRMVGIYGFGGIGKTTIAKVLYNQISAQFMIASFIANVRE 260

Query: 222 ESEKVGGLANIHLN----FERR----------------RLSRMKVLIVFYDLTDLKQIDL 261
           +S+  G L          F RR                RL   KVL+V  D+ DL Q++ 
Sbjct: 261 DSKSRGLLHLQKQLLQDIFPRRKNFISNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEA 320

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  + F  GSR+I+TTRD  LL+ H    +  ++E K+L + +++ LFS NAF QNHP
Sbjct: 321 LAGDHNWFGLGSRIIVTTRDKHLLEVHE---MDALYEAKKLDHKEAVELFSWNAFKQNHP 377

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              +  ++N V+ Y NG+PL L+VLGS+L G + ++W+S ++KL+R P+ +IQ VL  SY
Sbjct: 378 KEDYEIVTNSVVHYVNGLPLGLKVLGSFLYGKTIQQWKSELHKLEREPNREIQCVLMRSY 437

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           D LD  ++ IFLD ACFF G D+  V   LDAC F A+ G+  L  K L++I +N I MH
Sbjct: 438 DELDRTQKQIFLDVACFFNGEDKDFVTRILDACNFFAESGLRVLGDKCLISIIDNNIWMH 497

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE------------NTSLPTGINLD 489
           DLL+ MG  IV Q+  +DPGK SRL +PE + +VL              N S+P  I++ 
Sbjct: 498 DLLRHMGRGIVGQKFPEDPGKWSRLCYPEVVSRVLTRKMGTKAIKGILFNLSIPKPIHIT 557

Query: 490 S----------LKELYLGGCSNLKR------------FPEISCNIEDLDLKETAIEELPS 527
           +          L ++YL   S   R            FP  S  +  L  +   +E LPS
Sbjct: 558 TESLEMMKNLRLLKIYLDHESFSTREDNKVKLSKDFEFP--SLELRYLYWQGYPLESLPS 615

Query: 528 SIGNLSRLVDLD-----------------------------------------------L 540
           S   +  LV+LD                                               L
Sbjct: 616 SFF-VEDLVELDMRYSSLTQLWENDMLLEKLNTIRLSCSQHLIEIPDISICAPNLEKLIL 674

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLK-----------------------LEKLPEEI 577
             CS L  +   +  L  L  LNL  C K                       L+K P+  
Sbjct: 675 DGCSSLLILHPSIGKLSKLILLNLKNCKKLSSFPSIIDMKALEILNFSGCSGLKKFPDIR 734

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           GN++ L  L+LA    E++PSS+  +++L  L L+ CK L+SLP   C
Sbjct: 735 GNMDHLLELHLASTAIEELPSSIGHITRLVLLDLKRCKNLKSLPTSIC 782



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 104/164 (63%), Gaps = 10/164 (6%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           +S P+ I++ +L+ L   GCS LK+FP+I  N++   +L L  TAIEELPSSIG+++RLV
Sbjct: 705 SSFPSIIDMKALEILNFSGCSGLKKFPDIRGNMDHLLELHLASTAIEELPSSIGHITRLV 764

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            LDL  C  LKS+ + +C LKSL  L LSGC KLE  PE + ++E+L+ L L     E +
Sbjct: 765 LLDLKRCKNLKSLPTSICRLKSLEYLFLSGCSKLENFPEVMVDMENLKELLLDGTSIEGL 824

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
           PSS+ +L  L  L ++ C+ L SLP+  C         TSL+TL
Sbjct: 825 PSSIDRLKGLVLLNMRKCQNLVSLPKGMC-------KLTSLETL 861



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 4/141 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLPT I  L SL+ L+L GCS L+ FPE+  ++E+L    L  T+IE LPSSI  L  LV
Sbjct: 776 SLPTSICRLKSLEYLFLSGCSKLENFPEVMVDMENLKELLLDGTSIEGLPSSIDRLKGLV 835

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L++  C  L S+   +C L SL  L +SGC +L  LP  +G+L+ L  L+       + 
Sbjct: 836 LLNMRKCQNLVSLPKGMCKLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQP 895

Query: 597 PSSMKQLSKLSDLRLQNCKRL 617
           P S+  L  L  L    CK L
Sbjct: 896 PESIVLLRNLQVLIYPGCKIL 916



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 95/213 (44%), Gaps = 34/213 (15%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRL 535
             SLP G+  L SL+ L + GCS L   P    +++    L    TAI + P SI  L  L
Sbjct: 846  VSLPKGMCKLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAITQPPESIVLLRNL 905

Query: 536  VDLDLTNCSGLKSVS-SRLCNLKSLRR----------------------LNLSGCLKLE- 571
              L    C  L   S   L +   + R                      L+LS    +E 
Sbjct: 906  QVLIYPGCKILAPTSLGSLFSFWLMHRNSSNGVGLRLPSSFFSFRSFTNLDLSDLKLIEG 965

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
             +P +I +L SL+ L+L+  +F  IP+ + QL+ L DLRL +C+ L  +PELP     + 
Sbjct: 966  AIPNDICSLISLKKLDLSRNNFLSIPAGISQLTNLKDLRLGHCQSLIIIPELPPSIRDVD 1025

Query: 631  ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
            A +CT+L   S+S   L         F F NCS
Sbjct: 1026 AHNCTALFPTSSSVCTLQGLQ-----FLFYNCS 1053


>gi|224130518|ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838611|gb|EEE76976.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 265/727 (36%), Positives = 382/727 (52%), Gaps = 115/727 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+S S        K+DVFLSFRG+D R +F  HL  ALC   + TF DD+ L RGNEIS
Sbjct: 1   MAASYSRTTT--RWKYDVFLSFRGEDTRKSFTDHLYTALCHRGVITFRDDQELERGNEIS 58

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-- 117
             L  AI+ S+ S+++FS  Y SS WCLNELVKI+E   +  Q V+PVFY VDPS+    
Sbjct: 59  RELLQAIQDSRFSVIVFSRNYTSSTWCLNELVKIVECMKQGRQTVIPVFYDVDPSEVRNQ 118

Query: 118 --------------YCPSLGWMGIFDIPTS--------------ESVLIEGNVNDISKKL 149
                         +  ++  +  + I                 ES  I+G V +I  KL
Sbjct: 119 TGRLQQAFADHEEVFKDNIEKVQTWRIAMKLVANLSGWDLQDRHESEFIQGIVEEIVCKL 178

Query: 150 --SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYS 204
             S    S   + LVG++  ++E+   L  G  + N V + GI G+G   KTTIA A+Y 
Sbjct: 179 RKSSYSMSWVTENLVGMDWRLEEM--SLYLGVEQLNDVRVIGICGMGGIGKTTIARAVYE 236

Query: 205 NISSHFEGSYFMQNIRDESEKVG------------------GLANIH--LNFERRRLSRM 244
            +  HFEGS F+ N+R+  EK G                   ++++H  +N  R RL   
Sbjct: 237 KMLGHFEGSSFLANVREVEEKHGLVRLQEQLLSDTLMDRRTKISDVHRGMNEIRVRLRSR 296

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
            VL+V  D+  L Q++ L+G  + F  GSRVIITTRD  LLK      V  ++ V  L+ 
Sbjct: 297 MVLVVLDDVDQLVQLESLVGDRNWFDNGSRVIITTRDELLLKQFG---VDKIYRVASLNN 353

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM-SEEEWESAVN 363
            +++ LF   AF    P   ++  +  V+KYA+G+PLAL VLGS+  G+ S E W  ++ 
Sbjct: 354 IEAVQLFCLKAFRSYCPPEDYVLQTIQVVKYADGLPLALHVLGSFFSGIRSVELWNHSLK 413

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           +LK +P   I   LK+S+DGL++ E+ IFLD ACFF G ++  V   +++  F  +IGI 
Sbjct: 414 RLKDIPDKGILDKLKISFDGLNEVEKKIFLDIACFFNGWEEDCVTKLMESSGFYPQIGIR 473

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTS 481
            LV K L+ IS+N++ MHDLLQEMG +IV++ES ++PGKR+RLW  ED+  VL  N  T 
Sbjct: 474 ILVEKFLINISDNRVWMHDLLQEMGRQIVKRESHEEPGKRTRLWLCEDVIHVLLNNTGTD 533

Query: 482 LPTGINLDSLKE---LYLGGCSNLK-------------------------------RFPE 507
              GI L+S  E   LYL   S +K                               R+P 
Sbjct: 534 KVEGIVLNSNDEVDGLYLSAESIMKMKRLRILKLQNINLSQEIKYLSNELRYLEWCRYPF 593

Query: 508 ISC-------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL-KSVSSRLCNLKSL 559
            S         + +L ++ ++I++L   +  L  L  +DL +   L K+   R   + +L
Sbjct: 594 KSLPSTFQPDKLVELHMRHSSIKQLWEGVRPLKLLRAIDLRHSRNLIKTPDFR--QVPNL 651

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK---IPSSMKQLSKLSDLRLQNCKR 616
            +LNL GC KL K+ + IG L+ L +LNL  KD  K   +P+++ +L  L  L L  C +
Sbjct: 652 EKLNLEGCRKLVKIDDSIGILKGLVFLNL--KDCVKLACLPTNICELKTLRILNLYGCFK 709

Query: 617 LQSLPEL 623
           L+ LPE+
Sbjct: 710 LEKLPEM 716



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 108/209 (51%), Gaps = 29/209 (13%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           LPT I  L +L+ L L GC  L++ PE+     N+E+LD+  TAI +LPS+ G   +L  
Sbjct: 689 LPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFGLWKKLKV 748

Query: 538 LDLTNCSGLKSVS-SRLCNLKSLRR--------------------LNLSGCLKLE-KLPE 575
           L    C G    S   L + +SL R                    LNLS C  +E +LP+
Sbjct: 749 LSFDGCKGPAPKSWYSLFSFRSLPRNPCPITLMLSSLSTLYSLTKLNLSNCNLMEGELPD 808

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
           ++    SLE L+L   +F +IPSS+ +LSKL  LRL NCK+LQSLP+LP     +    C
Sbjct: 809 DMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEYLGVDGC 868

Query: 635 TSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
            SL TL N      R SK   +  F NCS
Sbjct: 869 ASLGTLPNLFEECAR-SKFLSLI-FMNCS 895



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 14/152 (9%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  L+ + L    NL + P+     N+E L+L+    + ++  SIG L  LV L+L +C 
Sbjct: 625 LKLLRAIDLRHSRNLIKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCV 684

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L  + + +C LK+LR LNL GC KLEKLPE +GN+ +LE L++      ++PS+     
Sbjct: 685 KLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFGLWK 744

Query: 605 KLSDLRLQNCK-----------RLQSLPELPC 625
           KL  L    CK             +SLP  PC
Sbjct: 745 KLKVLSFDGCKGPAPKSWYSLFSFRSLPRNPC 776


>gi|147822714|emb|CAN68293.1| hypothetical protein VITISV_015601 [Vitis vinifera]
          Length = 1254

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 271/770 (35%), Positives = 381/770 (49%), Gaps = 154/770 (20%)

Query: 4   SSSSINMIPHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPS 61
           SS+   + P P + DVFLSFRG D R NF  HL   L R  I TF DD  L RG EI PS
Sbjct: 8   SSTRSTLSPFPWRWDVFLSFRGADTRFNFTDHLYKELMRMDIRTFRDDDGLERGGEIQPS 67

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG---- 117
           L  AIE S  S+V+FS+ YA S+WCL+EL KI+ S+ +  Q+V+PVFY VDPSD      
Sbjct: 68  LLKAIEDSMNSVVVFSQNYAHSKWCLDELDKIMRSRKEKRQMVLPVFYHVDPSDVRKQTG 127

Query: 118 ------------YCPSL-------GW-----------MGIFDIPTSESVLIEGNVNDISK 147
                       +  +L       GW           +  F I   E+  I+  V +I  
Sbjct: 128 SFGEVTEERVLRWRKALTEAANLAGWHVQEDGSLLRVLSCFVIGRYETEAIQKIVQEICD 187

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
            +S   P D  D+L+G+   +K+I S + + S     +GI GIGGIGKTT+A  +Y+   
Sbjct: 188 LISVRKPLDLDDKLIGMGPCLKDIASLISNDSDNVRMIGIHGIGGIGKTTLAKIVYNQNF 247

Query: 208 SHFEGSYFMQNI--RD----ESEKVGGLA--------NIH--LNFERRRLSRMKVLIVFY 251
             FEG+ F+ ++  RD    ++E +  L         NI+  +N  + RL   KVL++  
Sbjct: 248 YKFEGACFLSSVSKRDLLQLQNELLKALTGPYFPSARNIYEGINMIKDRLRFRKVLVILD 307

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+ D  Q++ L  R   F  GSR+I+TTRD +LL+  R      ++EVKEL+  ++L LF
Sbjct: 308 DIDDQAQLEFLAVRSKWFGSGSRIIVTTRDKRLLQVFR------LYEVKELNSEEALHLF 361

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
           S  AF  + P  GF +LS  ++ +  G+PLAL+VLGS L G ++ EWE+ + K++ +   
Sbjct: 362 SLYAFMMDGPQKGFEKLSRCIVDHCEGLPLALKVLGSLLYGRTKPEWENELAKMRNLRSQ 421

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
            I  VL  S+ GLD   + I LD ACFFKG D   V   L+AC F A  GI  L  K+L+
Sbjct: 422 KIHSVLLRSFHGLDRTNRRILLDIACFFKGEDIKFVREILEACNFCAHPGIRILNEKALI 481

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           ++SN+K+ MHDL+Q+MG +IVR++   +PGK SRLW PEDIY VL  NT      GI LD
Sbjct: 482 SVSNDKLLMHDLIQQMGWDIVREKYPDEPGKWSRLWDPEDIYHVLTTNTGTQAIEGIFLD 541

Query: 490 --SLKELYLGGCS--------------NLK------------RFP--------------- 506
             + KE++L   +              NLK            +FP               
Sbjct: 542 MSASKEIHLTTDAFKKMKKLRLLRVYHNLKNISDTIHLPQDFKFPSHELRYLHWDGWTLE 601

Query: 507 EISCNIE-----DLDLKETAIEELPSSIGNLSRLVDLDLTN------------------- 542
            +  N       +L LK ++I+ L      L +L  ++L+N                   
Sbjct: 602 SLPSNFHGEKLVELSLKHSSIKRLWKEHKCLGKLKVINLSNSQHLVECPNLSGAPHVKRL 661

Query: 543 ----CSGLKSVSSRLCNLKSLRRLNLSGCL-----------------------KLEKLPE 575
               C+ L  V   +  LK L  LN+  C                        KL+K PE
Sbjct: 662 ILDGCTSLLEVHPSVAKLKRLTILNMKNCKMLHHFPSITGLESLKVLNLSGCSKLDKFPE 721

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             G +E L  LNL      ++PSS+  L +L  L ++NCK L+ LP   C
Sbjct: 722 IQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSLDMKNCKNLKILPSNIC 771



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 89/147 (60%), Gaps = 3/147 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            P+   L+SLK L L GCS L +FPEI   +E   +L+L+ TAI ELPSS+  L +LV L
Sbjct: 696 FPSITGLESLKVLNLSGCSKLDKFPEIQGYMEYLSELNLEGTAIVELPSSVVFLPQLVSL 755

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           D+ NC  LK + S +C+LKSL  L  SGC  LE  PE +  +ESL+ L L     +++P 
Sbjct: 756 DMKNCKNLKILPSNICSLKSLETLVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPP 815

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPC 625
           S+  L  L  L L+ CK L+SLP   C
Sbjct: 816 SIVHLKGLQLLSLRKCKNLRSLPNSIC 842



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 4/138 (2%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP+ I +L SL+ L   GCS L+ FPEI   +E L    L  T+I+ELP SI +L  L  
Sbjct: 766 LPSNICSLKSLETLVFSGCSGLEMFPEIMEVMESLQKLLLDGTSIKELPPSIVHLKGLQL 825

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L  C  L+S+ + +C+L+SL  L +SGC  L KLPEE+G+L+ L  L        + P
Sbjct: 826 LSLRKCKNLRSLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPP 885

Query: 598 SSMKQLSKLSDLRLQNCK 615
            S+  L  L +L  + CK
Sbjct: 886 FSLVHLRNLKELSFRGCK 903



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 100/215 (46%), Gaps = 33/215 (15%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE---TAIEELPSSIGNLSRLV 536
            SLP  I +L SL+ L + GCSNL + PE   +++ L + +   TAI + P S+ +L  L 
Sbjct: 836  SLPNSICSLRSLETLIVSGCSNLNKLPEELGSLQYLMILQADGTAITQPPFSLVHLRNLK 895

Query: 537  DLDLTNCSGLKSVS----------------------SRLCNLKSLRRLNLSGC-LKLEKL 573
            +L    C G  S S                        L  L SL+ L+LSGC L    +
Sbjct: 896  ELSFRGCKGSTSNSWIXSLVFRLLRRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDGSI 955

Query: 574  PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
             + +G L  LE LNL+  +   +P  + +LS L  L +  CK LQ + +LP    S+ A 
Sbjct: 956  NDNLGRLRFLEELNLSRNNLVMVPEGVHRLSNLRVLSVNQCKSLQEISKLPPSIKSLDAG 1015

Query: 633  HCTSLKTLSNSST-----LLTRSSKHWDIFNFSNC 662
             C SL+ LS  S      L + S  H   F  SNC
Sbjct: 1016 DCISLEFLSIPSPQSPQYLSSSSCLHPLSFKLSNC 1050


>gi|224144390|ref|XP_002325273.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862148|gb|EEE99654.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 542

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 211/527 (40%), Positives = 302/527 (57%), Gaps = 68/527 (12%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I  F DD  L RG EIS  L  AI+ SK
Sbjct: 10  PEGAYDVFLSFRGEDTRKTFTDHLYTALVQAGIRAFRDDDDLPRGEEISDHLLRAIQESK 69

Query: 71  ISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGY----------- 118
           ISIV+FS+GYASSRWCLNELV+ILE  K K GQIV+P+FY +DPSD              
Sbjct: 70  ISIVVFSKGYASSRWCLNELVEILECKKRKTGQIVLPIFYDIDPSDVRKQTGSFAKAFDK 129

Query: 119 -------------------CPSLGWMGIFDIPTS-ESVLIEGNVNDISKKLSD--LFPSD 156
                                +L    + D+    E+  I+G +ND+  KL    L+  +
Sbjct: 130 HEKRFEEKLVKEWRKALEDAANLSGRSLNDMANGHEAKFIKGIINDVLNKLRRECLYVPE 189

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           +   LVG++ +  +I   L + + +   VGI G+ GIGKTT+A  +++ +   FEGS F+
Sbjct: 190 H---LVGMD-LAHDIYDFLSTATDDVRIVGIHGMPGIGKTTLAKVVFNQLCYRFEGSCFL 245

Query: 217 QNIRDESEKVGGL----------------ANIHLN-----FERRRLSRMKVLIVFYDLTD 255
            NI + S++V GL                ANI+         + RL R +VL+V  D+  
Sbjct: 246 SNINESSKQVNGLVPLQKQLLHDISKQDVANINCVDRGKVMIKDRLCRKRVLVVADDVAH 305

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L+Q + L+G    F PGSRVIITTRD  LL+          ++++EL  ++SL LFS +A
Sbjct: 306 LEQQNALMGERSWFGPGSRVIITTRDSNLLRE-----ADRTYQIEELKPDESLQLFSCHA 360

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F  + PA  +++LS   + Y  G+PLAL+V+G+ L G + + W+  + KL+R+P+ DIQ 
Sbjct: 361 FKDSKPAKDYIKLSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPNHDIQG 420

Query: 376 VLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTI 433
            L++S+D LD EE QN FLD ACFF    +  V   L A C ++ ++ +  L G+SL+ +
Sbjct: 421 RLRISFDALDGEELQNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLQTLHGRSLIKV 480

Query: 434 SN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
               KITMHDLL++MG E+VR+ S K+PGKR+R+W+ ED + VL + 
Sbjct: 481 DAIGKITMHDLLRDMGREVVRETSPKEPGKRTRIWNQEDAWNVLEQQ 527


>gi|356560705|ref|XP_003548629.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1059

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 238/711 (33%), Positives = 370/711 (52%), Gaps = 112/711 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R  FVSHL+ AL +  + TFIDD+ L +G  +   L  AIEGS+IS+V
Sbjct: 28  YDVFINFRGEDTRGKFVSHLHYALSKAGVNTFIDDENLLKGMTLKDELMRAIEGSQISLV 87

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------------------- 114
           +FS+ Y  S WCL+EL KILE +  + QIV+P+FY ++PS                    
Sbjct: 88  VFSKSYTESTWCLDELEKILECRKLHDQIVMPIFYDIEPSVVRHQKGAFGKALKSAVEKT 147

Query: 115 -DAGYCPSLGW-----------MGIFDIP--TSESVLIEGNVNDISKKL--SDLFPSDNK 158
               +   + W           +  F +    +E++L++  V D+ +KL   DL+ ++  
Sbjct: 148 YSGEHAEQVLWRWSSALNRAADLSGFHVVDRRNEAILVKEIVEDVLRKLVYEDLYVTEFP 207

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
              VG+ES ++++   + +  T+   +GIWG+GG+GKT+ A  IY+ I   F    F+++
Sbjct: 208 ---VGLESRVQKVIGLINNQFTKVCMIGIWGMGGLGKTSTAKGIYNQIHRKFIDKSFIED 264

Query: 219 IRDESEKVGGLANIHLNFE----------------------RRRLSRMKVLIVFYDLTDL 256
           IR E  +  G  +I L  +                      + RLS  ++L+V  D+ +L
Sbjct: 265 IR-EICQTEGRGHILLQKKLLSDVLKTEVDILSVGMGKTTIKERLSGKRMLVVLDDVNEL 323

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q++ L G  + F  G+ +IITTRDV+LLK     +V  +++++E+  N+SL LFS +AF
Sbjct: 324 GQVEHLCGNREWFGQGTVIIITTRDVRLLKQ---LKVDSIYKLEEMDKNESLELFSWHAF 380

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           G   P   F EL+  V+ Y  G+PLAL+VLG+YL    ++ WES ++KL+++P+  +QK 
Sbjct: 381 GNAEPREDFKELARSVVAYCGGLPLALRVLGAYLIERPKQLWESVLSKLEKIPNDQVQKK 440

Query: 377 LKVSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-S 434
           L++S+DGL D  E++IFLD  CFF G D+  V   L+ C   A IGI+ L+ +SL+ +  
Sbjct: 441 LRISFDGLSDPLEKDIFLDVCCFFIGKDRGYVTEILNGCGLHADIGITVLLERSLIKVEK 500

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKEL 494
           NNK+ MH LL++MG EI+ + S   PGKRSRLW  +D+  VL +NT   T + L +LK  
Sbjct: 501 NNKLGMHPLLRDMGREIICESSRNKPGKRSRLWFQKDVLDVLTKNTGTETIVGL-ALKLH 559

Query: 495 YLG-GCSNLKRFPEI-SCNIEDLD--------------LKETAIEELPSSI----GNLSR 534
           Y    C N   F E+ S  +  LD              L+    +  PS       NL  
Sbjct: 560 YSSRDCFNAYAFKEMKSLRLLQLDHVHITGDYQYLSKQLRWVCWQGFPSKYIPNNFNLEG 619

Query: 535 LVDLDLTNC----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
           ++ +DL +                       S   + +     L SL +L L  C  L K
Sbjct: 620 VIAIDLKHSNLRLVWKKPQVLQWLKILNLSHSKYLTATPNFSGLPSLEKLILKDCPSLSK 679

Query: 573 LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           + + IG+L  L  +N+ +      +P  M QL  +  L L  C ++  L E
Sbjct: 680 VHKSIGDLHKLVLINMKDCTSLSNLPREMYQLKSVKTLNLSGCSKIDKLEE 730



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRL 553
           YL    N    P    ++E L LK+  ++ ++  SIG+L +LV +++ +C+ L ++   +
Sbjct: 653 YLTATPNFSGLP----SLEKLILKDCPSLSKVHKSIGDLHKLVLINMKDCTSLSNLPREM 708

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
             LKS++ LNLSGC K++KL E+I  +ESL  L       +++P S+  L  +  + L
Sbjct: 709 YQLKSVKTLNLSGCSKIDKLEEDIVQMESLTTLIAENTAVKQVPFSIVSLKSIGYISL 766


>gi|357513731|ref|XP_003627154.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355521176|gb|AET01630.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1544

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 253/731 (34%), Positives = 378/731 (51%), Gaps = 108/731 (14%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSK 70
           I H K+D+F+SFRG+D R NF + L+ AL    IE++ID  L +G+E+ P+L+ AI+ S 
Sbjct: 3   ISHKKYDLFISFRGEDTRTNFTAQLHRALTDSSIESYIDYSLVKGDEVGPALAKAIQDSH 62

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGY 118
           +S+V+FSE YA+S+WCL+EL+ IL+ +  +GQ+V+PVFY +DPS             A Y
Sbjct: 63  MSLVVFSENYATSKWCLDELLHILQCRKHHGQVVIPVFYNIDPSHVRHQKESYEMAFARY 122

Query: 119 CPSLG-----------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSD 156
              L            W     +  +           +S +I+  V D+ +KLS ++P++
Sbjct: 123 DRDLAHSKSQLDKVSEWKAALKLAANISGWDSRKYRDDSQVIDKIVEDVLQKLSLMYPNE 182

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
            KD LV V+   ++IE  L +       +GIWG+ GIGKTTIA  +++   +H++   F+
Sbjct: 183 LKD-LVTVDENSEDIELLLKT----IPRIGIWGMSGIGKTTIAKQMFAKNFAHYDNVCFL 237

Query: 217 QNIRDESEKVGGL-----------------ANIH--LNFERRRLSRMKVLIVFYDLTDLK 257
           + + ++SEK+G +                 +++H    F +RRL R KV IV  D+ +  
Sbjct: 238 EKVSEDSEKLGPIYVRNQLLRELLKREITASDVHGLHTFIKRRLFRKKVFIVLDDVDNAS 297

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+D L   L    P SR+IITTRD   L      +V  ++EVK     DSL LFS  AF 
Sbjct: 298 QLDDLCRVLGDLGPNSRLIITTRDRHTL----SGKVDEIYEVKTWRLKDSLKLFSLRAFK 353

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN----KLKRMPHMDI 373
           Q+HP  G+   S   ++ A GVPLAL+VLGS+      E WES +N    K + +P  DI
Sbjct: 354 QDHPLKGYECFSERAVECAGGVPLALEVLGSHFHSRKPEFWESELNLYENKGESLP--DI 411

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           QKVLK SY+GL   ++ +FLD A FFKG ++ +V   LDA  F+A  GI  L  K+L+TI
Sbjct: 412 QKVLKASYNGLSWRQKEMFLDIAFFFKGENKDIVTRILDAFGFNATSGIEILEDKTLITI 471

Query: 434 SNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN------------- 479
           SNN +I MHDLLQ++  +IVR+E   D GKRSRL   +DI  VL  N             
Sbjct: 472 SNNSRIQMHDLLQKLAFDIVREE-YNDRGKRSRLRDAKDICDVLGNNKGNDAIEGIIFDL 530

Query: 480 -TSLPTGINLDSLKELY---------------LGGCSNLKRFPEISCNIEDLDLKETAIE 523
              L   +  D+ K +                LG     +        +  L+     ++
Sbjct: 531 SQKLDINVQADTFKLMTKLRFLKFHIPKGKKKLGTVHLPENIMPFFDKLTYLEWNGYPLK 590

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
            LP    +  +L+ + L + S ++ +   +  L +L  ++LS C +L  LP+  G L+ L
Sbjct: 591 SLPEPF-HAEQLIQISLPH-SNIEHLWYGMQELVNLEAIDLSECKQLRHLPDLSGALK-L 647

Query: 584 EYLNLA--EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL---PELPCGSSIHARHCTSLK 638
           + L L+  E+  E  PS+  +   L  L L  C +L+SL     L        + C SLK
Sbjct: 648 KQLRLSGCEELCEVRPSAFSK-DTLDTLLLDRCTKLESLMGEKHLTSLKYFSVKGCKSLK 706

Query: 639 TLSNSSTLLTR 649
             S SS  + R
Sbjct: 707 EFSLSSDSINR 717



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 26/186 (13%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLV-----DLDLT 541
           +L SLK   + GC +LK F   S +I  LDL +T I+ L  SIG+++ L+     DL+LT
Sbjct: 690 HLTSLKYFSVKGCKSLKEFSLSSDSINRLDLSKTGIKILHPSIGDMNNLIWLNLEDLNLT 749

Query: 542 NC----SGLKSVSS---RLCNLKSLRRLN-------------LSGCLKLEKLPEEIGNLE 581
           N     S L+S++      CN+ +  +L              L  C  L +LP  I +LE
Sbjct: 750 NLPIELSHLRSLTELRVSKCNVVTKSKLEALFEGLTLLRLLHLKDCCNLIELPANISSLE 809

Query: 582 SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
           SL  L L     E++P+S+K LS+L    L NC +L+ LPELP       A +CTSL T+
Sbjct: 810 SLHELRLDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSLITV 869

Query: 641 SNSSTL 646
           S   T 
Sbjct: 870 STLKTF 875



 Score = 39.3 bits (90), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 26/151 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEEL----PSSIGNLSRLVDLDLTNC 543
           L +L+ + L  C  L+  P++S  ++   L+ +  EEL    PS+      L  L L  C
Sbjct: 621 LVNLEAIDLSECKQLRHLPDLSGALKLKQLRLSGCEELCEVRPSAFSK-DTLDTLLLDRC 679

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEK--------------------LPEEIGNLESL 583
           + L+S+     +L SL+  ++ GC  L++                    L   IG++ +L
Sbjct: 680 TKLESLMGEK-HLTSLKYFSVKGCKSLKEFSLSSDSINRLDLSKTGIKILHPSIGDMNNL 738

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
            +LNL + +   +P  +  L  L++LR+  C
Sbjct: 739 IWLNLEDLNLTNLPIELSHLRSLTELRVSKC 769


>gi|105922450|gb|ABF81417.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1867

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 247/701 (35%), Positives = 376/701 (53%), Gaps = 109/701 (15%)

Query: 22   FRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIVIFSEGY 80
            FRGKD R+NF SHL + L +  I+ + DD +L RG  I P+L  AIE S+ S +IFS  Y
Sbjct: 844  FRGKDTRNNFTSHLYSNLTQRGIKVYRDDSELERGKTIEPALWKAIEESRFSAIIFSRDY 903

Query: 81   ASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------------- 118
            ASS WCL+ELVKI++   + GQ V+PVFY VDPS+                         
Sbjct: 904  ASSPWCLDELVKIVQCMKEKGQTVLPVFYDVDPSEVAEQKGKYKKAFVKHEQNFKENLEK 963

Query: 119  ------CPSL-----GWMGIFDIPT-SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                  C S+     GW    D+    ES  I+   + IS KLS   P+ +K +LVG++S
Sbjct: 964  VRNWKDCLSMVANLSGW----DVRNRDESESIKAIADCISYKLSLTLPTISK-ELVGIDS 1018

Query: 167  IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE-SEK 225
             ++ +   +   + E   +GI G+GGIGKTT+A  +Y  I   FEGS F+ N+R+  +EK
Sbjct: 1019 RLEVLNGYIGEETGEAIFIGICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVREAFAEK 1078

Query: 226  VGG-------LANIHLNFE-------------RRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
             G        L++I +  +             +++L R+K+L+V  D+ D KQ++ L   
Sbjct: 1079 DGPRSLQKKLLSDILMERDINICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQLEYLAKE 1138

Query: 266  LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
               F PGSR+IIT+RD  +L  +  +++   +E ++L+ +D+L LFS+ AF  + PA GF
Sbjct: 1139 PGWFGPGSRIIITSRDTNVLIGNDDTKI---YEAEKLNDDDALMLFSQKAFKNDQPAEGF 1195

Query: 326  LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            +ELS  V+ YANG+PLAL+V+GS+L   S  EW  A+N++  +P   I  VL+VS+DGL 
Sbjct: 1196 VELSKQVVDYANGLPLALEVIGSFLYERSIPEWRGAINRMNEIPDCKIIDVLRVSFDGLH 1255

Query: 386  DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
            + ++ IFLD ACF KG  +  +   L++  F A IGI  L+ +SL+++S +++ MHDLLQ
Sbjct: 1256 ESDKKIFLDIACFLKGFKKDRITRILESRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQ 1315

Query: 446  EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----------LPTGIN-------- 487
             MG EIVR ES ++PG+RSRLW  ED+   L +NT           +P GI         
Sbjct: 1316 IMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMP-GIKEAQWNMKA 1374

Query: 488  LDSLKELYLGGCSNLK--RFPE-ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
               +  L L   +NL+  + PE +S  +  L+      + LP+ +  +  LV+L + N S
Sbjct: 1375 FSKMSRLRLLKINNLQLSKGPEDLSNQLRFLEWHSYPSKSLPAGL-QVDELVELHMANSS 1433

Query: 545  ------GLKSV----------------SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
                  G KS                 +  L  + +L  L L GC  L K+   +G+ ++
Sbjct: 1434 IEQLWYGYKSAVNLKIINLSNSLNLSRTPDLTGIPNLESLILEGCTSLSKVHPSLGSHKN 1493

Query: 583  LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            L+Y+NL   +  +I  S  ++  L    L  C +L+  P++
Sbjct: 1494 LQYVNLVNCESIRILPSNLEMESLKVFTLDGCSKLEKFPDV 1534



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 13   HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKIS 72
            H    VF   R  D   N +++L + L R  I +           I   L  AIE S +S
Sbjct: 1620 HWMASVFPDIRVADT-SNAITYLKSDLARRVIISL------NVKAIRSRLFKAIEESGLS 1672

Query: 73   IVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
            IVIFS   AS  WC +ELVKI+   ++     V PV Y V+ S
Sbjct: 1673 IVIFSRDCASLPWCFDELVKIVGFMDEMRSDTVFPVSYDVEQS 1715


>gi|357513281|ref|XP_003626929.1| TMV resistance protein N [Medicago truncatula]
 gi|355520951|gb|AET01405.1| TMV resistance protein N [Medicago truncatula]
          Length = 1071

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 248/721 (34%), Positives = 378/721 (52%), Gaps = 115/721 (15%)

Query: 1   MASSSSSINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEI 58
           M+SSS+      HP  +DVF+SFRG+D R  FVSHL AAL    I TF DDK L +GN++
Sbjct: 1   MSSSSN------HPLIYDVFISFRGEDTRKTFVSHLYAALTNAAIRTFRDDKELRKGNKL 54

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
            P +  AIEGS+ISIV+ S  YA S WCLNELV IL   + YGQ+V+PVFY VDPS    
Sbjct: 55  EPEIKRAIEGSRISIVVLSPYYAGSSWCLNELVHILHCSHTYGQVVMPVFYHVDPSHVRK 114

Query: 119 CPSLGWMGIFDIPT----------SESVLIE------GNVNDISKKLSDLFPSDNKDQL- 161
                +  IF++             ++VL E       ++N+IS +  +L     +D L 
Sbjct: 115 LEG-NFGTIFELHAIHREHELLSKWKTVLTEVSNLSGWDLNNISNE-GELVKQIVEDTLA 172

Query: 162 -------------VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
                        VG++S +++I   +   STE   +GIWG+GG GKTT A AIY+ I S
Sbjct: 173 KLDISLLSITEYPVGLDSRVQQITKFIDHQSTEVCMIGIWGMGGSGKTTTAKAIYNQIRS 232

Query: 209 HFEG-SYFMQNIRDE----------------------SEKVGGLANIHLNFERRRLSRMK 245
            F+G + F+++IR+                        +++  +A+     E +RL    
Sbjct: 233 RFKGRASFIESIREVCDNNNRGVIPLQQQLLLDLLKIKQEIHSIASGITKIE-KRLRGQT 291

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           V ++  D+T  +Q+  L      F  GS +IITTRD +LLK+  G    H+F + E+  +
Sbjct: 292 VFVILDDVTTSEQLKNLCADPKLFGSGSVLIITTRDGRLLKSLSGD---HIFTMTEMDED 348

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
            SL LF  +AF + +P   F EL+  V+ Y  G+PLAL+VLGSYL   +  EW SA++KL
Sbjct: 349 QSLELFCWHAFQKPYPRYSFSELTKNVVGYCGGLPLALEVLGSYLSKRTTREWRSALSKL 408

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           +++P+ ++Q++L++SYDGL D  Q +IFLD  CF  G ++  V   L+AC   A IGIS 
Sbjct: 409 EKIPNNEVQQILRISYDGLQDYTQKDIFLDICCFLIGKNRADVTEILNACGLHADIGISI 468

Query: 425 LVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP 483
           L+ +SL+ +  NNK+ MHDLL++MG  I  + SIKD     RLW  +D+  VL++ T   
Sbjct: 469 LIERSLLKVEKNNKLGMHDLLRDMGRAIAGESSIKD----MRLWFHDDVLHVLSKKTGTY 524

Query: 484 TGINL--------------DSLKE------LYLGGCSNLKRFPEISCNIEDLDLKETAIE 523
           T + +              DSL+E      L L G   +  +  IS  +  +D + +A +
Sbjct: 525 TIVGMILKYQRTGRIIFGTDSLQEMQKLRLLKLDGVHLMGEYGLISKQLRWVDWQRSAFK 584

Query: 524 ELPS------------------SIGNLSRLVD-LDLTNCSGLK--SVSSRLCNLKSLRRL 562
            +P+                   +   ++++D L + N S  K   ++     L +L +L
Sbjct: 585 FIPNDFDLENLVVFELKHSNLRQVWQETKILDKLKILNVSHNKYLKITPDFSKLPNLEKL 644

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +  C  L ++ + IG+L+SL  +NL +      +P  + QL  +  L +  C ++  L 
Sbjct: 645 IMKDCPSLSEVHQSIGDLKSLVLINLRDCTSLANLPREIYQLKSVKTLIISGCSKIDKLE 704

Query: 622 E 622
           E
Sbjct: 705 E 705



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 3/135 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           LD LK L +     LK  P+ S   N+E L +K+  ++ E+  SIG+L  LV ++L +C+
Sbjct: 615 LDKLKILNVSHNKYLKITPDFSKLPNLEKLIMKDCPSLSEVHQSIGDLKSLVLINLRDCT 674

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L ++   +  LKS++ L +SGC K++KL E+I  +ESL  L  A    +++P S+ +  
Sbjct: 675 SLANLPREIYQLKSVKTLIISGCSKIDKLEEDILQMESLTTLIAANTGVKQVPFSIVRSK 734

Query: 605 KLSDLRLQNCKRLQS 619
            ++ + L   K L S
Sbjct: 735 SIAYISLCGYKGLSS 749


>gi|359493390|ref|XP_003634584.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1067

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 223/623 (35%), Positives = 333/623 (53%), Gaps = 90/623 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R+NF SHL   L +  I+TF DD+ L +G EI+P L  AIE S+I+I
Sbjct: 22  RYDVFLSFRGEDTRNNFTSHLYKDLDKANIKTFKDDEELRKGGEIAPELLKAIEESRIAI 81

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF--DIP 131
           ++FS+ YA S+WCL+ELVKI+E + + GQIV PVFY V P     C      G +  +  
Sbjct: 82  IVFSKTYAHSKWCLDELVKIMECQKEKGQIVYPVFYHVRP-----CEVRNQYGTYGEEFK 136

Query: 132 TSESVLIE------GNVNDISKKLSDLFPSDNKDQ------------------------- 160
             ES   E      G      +K  DL     +D+                         
Sbjct: 137 KHESNADEEKKKKIGEWRTALRKAGDLSGFSLRDRSEAEFIEEIIGEIRRLIPKWVHVGE 196

Query: 161 -LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            +VG++  +K+++  + + S + + VGI+G GGIGKTTIA  +Y+++   F+   F++N+
Sbjct: 197 NIVGMDENLKKVKLLIDAQSNKVSMVGIYGTGGIGKTTIAKVVYNDMLDQFKCHSFLENV 256

Query: 220 RDESEKVGGL-------------------ANIHLNFERRRLSRM--KVLIVFYDLTDLKQ 258
           R++ E  G L                    NI   F++ +  R   KVLIV  D+   +Q
Sbjct: 257 REKYEDKGDLLQLQKELLCDILMEKNLVLRNIDEGFKKIKSKRHSEKVLIVLDDVGCEEQ 316

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L    + F PGS +I+TTR+ + L  +        +E K ++   +  LF  NAF Q
Sbjct: 317 LKFLAPNSECFHPGSIIIVTTRNKRCLDVYDSYSS---YEAKRMADKQAEELFCWNAFKQ 373

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           +HP   F+ LSN ++ YA+G+PLAL VLGS+L     +EWES +++LK +P  +IQKVL+
Sbjct: 374 DHPIENFVGLSNRILDYADGLPLALVVLGSFLFQRPMDEWESTLDELKTIPPENIQKVLQ 433

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           +SYDGL DE + +FL  ACFFK  D+ +    L++C+    IG+  L  + L++I +N I
Sbjct: 434 ISYDGLSDERKKLFLYIACFFKDEDEKMATRILESCKLHPAIGLRVLHERCLISIEDNTI 493

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYL-- 496
            MHDLLQEMG  IV  +  + PGK SRL   +DI  VL++N        +D    ++L  
Sbjct: 494 RMHDLLQEMGWAIVCNDPER-PGKWSRLCELQDIESVLSQNEPAKKLKVIDLSYSMHLVD 552

Query: 497 ----GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
                 CS LK FP+I+                    G+L  L  LD + C  L+S+   
Sbjct: 553 ISSISRCSKLKGFPDIN-------------------FGSLKALESLDFSGCRNLESLPVS 593

Query: 553 LCNLKSLRRLNLSGCLKLEKLPE 575
           + N+ SL+ L ++ C KLE++ E
Sbjct: 594 IYNVSSLKTLGITNCPKLEEMLE 616



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 4/130 (3%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKS-VSSRLCNLKSLRRLNLSGC-LKLEKLPEEI 577
           T +E +   I +LS LV L LT C   +  +   + NL  L++L+L  C L    + + I
Sbjct: 700 TVVEGILYDIFHLSSLVKLSLTKCKPTEEGIPRDIQNLSPLQQLSLHDCNLMKGTILDHI 759

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSL 637
            +L SLE L L    F  IP+ + +LS L  L L +CK+LQ +PELP        HC   
Sbjct: 760 CHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSHCKKLQQIPELPSSLRFLDAHCPD- 818

Query: 638 KTLSNSSTLL 647
             +S+S  LL
Sbjct: 819 -RISSSPLLL 827


>gi|302398845|gb|ADL36717.1| HD domain class transcription factor [Malus x domestica]
          Length = 561

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 207/521 (39%), Positives = 296/521 (56%), Gaps = 59/521 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R  F  HL  AL      TF DD +L RG +I P L  AI  S++S+
Sbjct: 21  RYDVFLSFRGEDTRRTFTDHLYTALNNAGFLTFRDDDELERGEDIKPGLQKAIRQSRMSV 80

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYG-QIVVPVFYLVDPSDA-GYCPSLGWMGIFDIP 131
           V+FS+ YASSRWCL+ELV ILE K      +V+PVFY VDPS A     S+G        
Sbjct: 81  VVFSKDYASSRWCLDELVMILERKRTTSDHVVLPVFYDVDPSHARKQTGSIGKAFARHEK 140

Query: 132 TSESVLIEGNVNDISK--KLSDLFPSDNKDQ---------------------------LV 162
           T     + G    +++   L+ +  S+  D+                           L+
Sbjct: 141 TQSPSKVRGRREALAQLADLAGMVLSNQADRYKSKFITKIVKVIGDKLIRTPLGVESNLI 200

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G++S +K I   L  GST+   V + G+ GIGKTTIA  +Y++  + FEGS F++NIR+ 
Sbjct: 201 GIQSRVKRINLWLQDGSTDVGIVAVHGMSGIGKTTIAKYVYNSNFTSFEGSSFVENIRET 260

Query: 223 SEKVGGLANIHLNF---------ER------------RRLSRMKVLIVFYDLTDLKQIDL 261
           + +  GL  + +           E+            R +S  +VL+V  D+  + Q+D 
Sbjct: 261 ASQPNGLVQMQMQLLYDILKGKEEKVHNVSEGISKIVRAISSRRVLLVLDDIDHMDQLDA 320

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           ++   D F PGS++IITTR  +LLK H   +V  V  V+ L Y++SL L S +AFGQ+HP
Sbjct: 321 VLRMKDRFYPGSKIIITTRHERLLKVH---QVTKVHGVETLDYDESLELLSWHAFGQDHP 377

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             G++E S  ++++  G+PLALQVLGS L G S   WESA+ KLK +P+ +I   L++SY
Sbjct: 378 PEGYMEYSKKLVQHTGGLPLALQVLGSSLLGESMGVWESALEKLKVIPNGEIMNKLRISY 437

Query: 382 DGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
           D L DD ++ +FL  ACF  G D+  ++  LD C F   +GI  L+ + LV I  + K+ 
Sbjct: 438 DSLQDDHDRKLFLHIACFLIGRDKNYIVRILDGCDFYTTVGIQNLIDRCLVKIDEDKKVN 497

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           MHDL+++MG EIVR ES ++P KRSRLW  +D +QVL E T
Sbjct: 498 MHDLIRDMGREIVRLES-EEPEKRSRLWRCKDSFQVLREKT 537


>gi|357449951|ref|XP_003595252.1| Heat shock protein [Medicago truncatula]
 gi|355484300|gb|AES65503.1| Heat shock protein [Medicago truncatula]
          Length = 1501

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 257/724 (35%), Positives = 376/724 (51%), Gaps = 102/724 (14%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSL 62
           + +S+++     +DVF+SFRG D R+NF   L  +L +  I TF D+K + +G +I+P+L
Sbjct: 69  TQASLSVSSSLTYDVFISFRGIDTRNNFTRDLYDSLDQNGIHTFFDEKQIQKGEQITPAL 128

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AG 117
             AI+ S+I IV+FS  YASS +CLNEL  IL+  N +G++++PVFY VDPS        
Sbjct: 129 FQAIQQSRIFIVVFSNNYASSTFCLNELALILDCSNTHGRLLLPVFYDVDPSQVRHQSGA 188

Query: 118 YCPSL----------------------------GWMGIFDIPTSESVLIEGNVNDISKKL 149
           Y  +L                            GW        SE   I   V +++KK+
Sbjct: 189 YGEALKKQEERFCDDKDKVQKWRDALCQAANVSGWHFQHG-SQSEYKFIGNIVEEVTKKI 247

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN-IS 207
           +   P    D  V +ES + E+ S L  GS E  N VGI+G GG+GK+T+A A+Y+N IS
Sbjct: 248 NRT-PLHVADNPVALESPVLEVASLLGIGSHEGANMVGIYGTGGVGKSTLARAVYNNQIS 306

Query: 208 SHFEGSYFMQNIRDESEKVG--------------------GLANIHLNFERRRLSRMKVL 247
             F+G  F+ +IR+ +   G                    G  N  ++  +RRL R KVL
Sbjct: 307 DQFDGVCFLDDIRENAINHGLVQLQETLLSEILCEKDIRVGNVNRGISIIKRRLQRKKVL 366

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+   KQI +L G  D F  GS++IITTRD  LL  H    + +++EVK+L++  S
Sbjct: 367 LVLDDVDKAKQIQVLAGGHDWFGSGSKIIITTRDKHLLAIHE---ILNIYEVKQLNHEKS 423

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LF+ +AF        + ++SN  + YA+G+PLAL+V+GS+L G   + W+SA++K +R
Sbjct: 424 LELFNWHAFRNRKMDPCYSDISNRAVSYAHGLPLALEVIGSHLFGKRLDVWKSALDKYER 483

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
           + H DI +VLK+SYD LD++++ IFLD ACF+  ++       L    FSA+ GI  L  
Sbjct: 484 ILHEDIHEVLKISYDDLDEDDKGIFLDIACFYNSDEMSYAKEMLYLHGFSAENGIQVLTD 543

Query: 428 KSLVTISNNK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG- 485
           KSL+ I  N  + MHDL+Q+MG EIVRQES  +PGKRSRLW  +DI  VL ENT   T  
Sbjct: 544 KSLIKIDGNGCVRMHDLVQDMGREIVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVE 603

Query: 486 ---INLDSLKELYLGG---------------CSNLKRFPE-ISCNIEDLDLKETAIEELP 526
              I+L + KE+   G                +   R P+ +  ++  LD      + LP
Sbjct: 604 VIIIDLYNDKEVQWSGEAFKKMKKLKILIIRSARFFRGPQKLPNSLRVLDWSGYPSQSLP 663

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK------SLRRLNLSGCLKLEKLPEEIGNL 580
                    +D +    + L    S L + K      SL  L+  GC  L +LP  +  L
Sbjct: 664 ---------IDFNPKKLNILSLHESYLISFKPIKVFESLSFLDFEGCKLLTELP-SLSGL 713

Query: 581 ESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTS 636
            +L  L L +  +   I  S+  L+KL  L  Q C  L+ L     LP    +  R C+ 
Sbjct: 714 LNLGALCLDDCTNLITIHKSVGFLNKLVLLSTQRCNELEVLVPNINLPSLEILDMRGCSC 773

Query: 637 LKTL 640
           LK+ 
Sbjct: 774 LKSF 777



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 5/111 (4%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIG 530
           Q  NE   L   INL SL+ L + GCS LK FPE+     NI D+ L +T+I++LP SI 
Sbjct: 746 QRCNELEVLVPNINLPSLEILDMRGCSCLKSFPEVLGVMENIRDVYLDQTSIDKLPFSIR 805

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC--LKLEKLPEEIGN 579
           NL  L  L L  C  L  ++  +  L  L  L   GC   +L +  E++G+
Sbjct: 806 NLVGLRRLFLRECMSLTQLTDSIRILPKLEILTAYGCRGFQLFESKEKVGS 856



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            +SL  L   GC  L   P +S   N+  L L + T +  +  S+G L++LV L    C+
Sbjct: 690 FESLSFLDFEGCKLLTELPSLSGLLNLGALCLDDCTNLITIHKSVGFLNKLVLLSTQRCN 749

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ +   + NL SL  L++ GC  L+  PE +G +E++  + L +   +K+P S++ L 
Sbjct: 750 ELEVLVPNI-NLPSLEILDMRGCSCLKSFPEVLGVMENIRDVYLDQTSIDKLPFSIRNLV 808

Query: 605 KLSDLRLQNCKRLQSLPE 622
            L  L L+ C  L  L +
Sbjct: 809 GLRRLFLRECMSLTQLTD 826


>gi|298204612|emb|CBI23887.3| unnamed protein product [Vitis vinifera]
          Length = 1384

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 243/678 (35%), Positives = 353/678 (52%), Gaps = 78/678 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG D R NF  HL +AL R  I TF DDKL  G  I P L +AIE S+ S+++
Sbjct: 24  YDVFLSFRGADTRSNFTDHLYSALGRRGIRTFRDDKLREGEAIGPELLTAIEESRSSVIV 83

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSLG 123
           FSE YA S WCL+ELVKI+E     G  V P+FY VDPS             AGY     
Sbjct: 84  FSENYAHSTWCLDELVKIMERHKDRGHAVFPIFYHVDPSHVRRKTESFGKAFAGY--EGN 141

Query: 124 WMGIFDIPTSESVLIE-----------GNVNDISKKLSDLFPS-------DNKDQLVGVE 165
           W     IP  ++ L E           G+ ++  K+++D+          D    LVG++
Sbjct: 142 WKD--KIPRWKTALTEAANLSGWHQRDGSESNKIKEITDIIFHRLKCKRLDVGANLVGID 199

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD---- 221
           S +KE+  +L   S++   VGI+G+GG+GKTTIA  IY+ +S  FE   F++NIR+    
Sbjct: 200 SHVKEMILRLHMESSDVRIVGIYGVGGMGKTTIAKVIYNELSCEFECMSFLENIREVSNP 259

Query: 222 ------ESEKVG------GLANIH-----LNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                 +++ +G      G  NI+      +  +  LS  KV +V  D+ D  Q++ L+G
Sbjct: 260 QVLYHLQNQLLGDILEGEGSQNINSVAHKASMIKDILSSKKVFMVLDDVDDPSQLENLLG 319

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             +    GS+VIITTRD  +L       V  ++EVK L++ ++  LFS  AF QN P + 
Sbjct: 320 HREWLGEGSKVIITTRDKHVLAVQ---EVDVLYEVKGLNFKEAHELFSLYAFKQNLPQSN 376

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           + +LS+ V+ Y  G+PLAL+VLGS L   +  +WES ++KL + P M I  VLK SYDGL
Sbjct: 377 YRDLSHRVVGYCQGLPLALKVLGSLLFKKTIPQWESELDKLDKEPEMKIHNVLKRSYDGL 436

Query: 385 DDEEQNIFLDTACFFKG-NDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDL 443
           D  E+ IFLD ACFFKG  D+  V   LD C F A+ GI  L  + L+T+  N+I MHDL
Sbjct: 437 DRTEKKIFLDVACFFKGEEDRDFVSRILDGCHFHAERGIRNLNDRCLITLPYNQIHMHDL 496

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----PTGINLDSLKEL----- 494
           +++ G EIVR++   +P K SRLW  +DI + L     +       +NL   + +     
Sbjct: 497 IRQTGWEIVREKFPNEPNKWSRLWDTQDIQRALRTYEGIEGVETIDLNLSDFERVCFNSN 556

Query: 495 YLGGCSNLK--------RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
                +NL+         F   S +  + +  E   EE      +L  L  +DL++ + L
Sbjct: 557 VFSKMTNLRLLRVHSDDYFDPYSHDDMEEEEDEEDEEEEEEKEKDLQSLKVIDLSHSNKL 616

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSK 605
             +     ++ +L  L L GC+ L  +   +G+L+ L  L+L      + +PSS+  L  
Sbjct: 617 VQM-PEFSSMPNLEELILKGCVSLINIDPSVGDLKKLTTLDLRGCVKLKGLPSSISNLEA 675

Query: 606 LSDLRLQNCKRLQSLPEL 623
           L  L L  C       E+
Sbjct: 676 LECLDLTRCSSFDKFAEI 693



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 26/167 (15%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ I+L+S++ L L  CS  ++FPE   N++   DL L+ TAI+ELP+ I N   L  L
Sbjct: 716 LPSSIDLESVEILDLSDCSKFEKFPENGANMKSLNDLRLENTAIKELPTGIANWESLEIL 775

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSG-----------------------CLKLEKLPE 575
           DL+ CS  +    +  N+KSL++L  +G                       C K EK PE
Sbjct: 776 DLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPE 835

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           + GN++SL+ L       + +P S+  L  L  L L  C + +  PE
Sbjct: 836 KGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEILDLSYCSKFEKFPE 882



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 86/168 (51%), Gaps = 27/168 (16%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  I +L+SL+ L L  CS  ++FPE   N++ L       T+I++LP SIG+L  L  
Sbjct: 809 LPDSIGDLESLEILDLSYCSKFEKFPEKGGNMKSLKKLRFNGTSIKDLPDSIGDLESLEI 868

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRL-----------------------NLSGCLKLEKLP 574
           LDL+ CS  +    +  N+KSL++L                       +LS CLK EK P
Sbjct: 869 LDLSYCSKFEKFPEKGGNMKSLKKLHLKNTAIKDLPDSIGDLESLEILDLSKCLKFEKFP 928

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           E+ GN++SL+ L+L     + +P S+  L  L  L L  C + +  PE
Sbjct: 929 EKGGNMKSLKKLSLINTAIKDLPDSVGDLESLEILHLSECSKFEKFPE 976



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 38/179 (21%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
            LP  I +L+SL+ L L  C   ++FPE   N   ++ L L  TAI++LP S+G+L  L  
Sbjct: 903  LPDSIGDLESLEILDLSKCLKFEKFPEKGGNMKSLKKLSLINTAIKDLPDSVGDLESLEI 962

Query: 538  LDLTNCS---------------------------------GLKSVSSRLCNLKSLRRLNL 564
            L L+ CS                                  +K +   + +L+SL  L+L
Sbjct: 963  LHLSECSKFEKFPEKGGNMKKISGEGREHEKIKAVSLINTAIKDLPDSIGDLESLESLDL 1022

Query: 565  SGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            S C K EK PE+ GN++SL+ L L     + +P S+  L  L  L L+N   ++ LP +
Sbjct: 1023 SECSKFEKFPEKGGNMKSLKELYLINTAIKDLPDSIGGLESLKILNLKNTA-IKDLPNI 1080



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 7/141 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK + L   + L + PE S   N+E+L LK   ++  +  S+G+L +L  LDL  C 
Sbjct: 602 LQSLKVIDLSHSNKLVQMPEFSSMPNLEELILKGCVSLINIDPSVGDLKKLTTLDLRGCV 661

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG---NLESLEYLNLAEKDFEKIPSSMK 601
            LK + S + NL++L  L+L+ C   +K  E  G   N+ SL +L L +    ++PSS+ 
Sbjct: 662 KLKGLPSSISNLEALECLDLTRCSSFDKFAEIQGIQGNMSSLTHLYLRKTAIRELPSSI- 720

Query: 602 QLSKLSDLRLQNCKRLQSLPE 622
            L  +  L L +C + +  PE
Sbjct: 721 DLESVEILDLSDCSKFEKFPE 741


>gi|16944811|emb|CAC82811.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1126

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 249/707 (35%), Positives = 365/707 (51%), Gaps = 96/707 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRGKD R NF SHL   L    I TF+DDK L  G+ +S  L  AI+ S++++
Sbjct: 22  KYDVFLSFRGKDTRRNFTSHLYERLDNRGIFTFLDDKRLENGDSLSKELVKAIKESQVAV 81

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           +IFS+ YA+SRWCLNE+VKI+E K + GQ+V+PVFY VDPSD                  
Sbjct: 82  IIFSKNYATSRWCLNEVVKIMECKEENGQLVIPVFYDVDPSDVRKQTKSFAEAFAEHESR 141

Query: 117 ------GYCPSLGW---------MGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                 G      W         +  +DI    ES  I   VN+IS KL +   S   D 
Sbjct: 142 YKDDVEGMQKVQRWRTALSEAADLKGYDIRERIESECIGELVNEISPKLCETSLSYLTD- 200

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           +VG+++ +K++ S L     +   V IWG+GG+GKTTIA AI+  +SS F+G+ F+ + +
Sbjct: 201 VVGIDAHLKKVNSLLEMKIDDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPDNK 260

Query: 221 DESEKVGGLANIHL------------------NFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           +   ++  L +I L                  +   RRL   KVL+V  ++    Q+  L
Sbjct: 261 ENKYEIHSLQSILLSKLVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKYL 320

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G L  F  G+R+I TTRD   ++ +       V+ V  L  +D++ LF++ AF    P 
Sbjct: 321 AGDLGWFGNGTRIIATTRDKHFIRKNDA-----VYPVTTLLEHDAVQLFNQYAFKNEVPD 375

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             F E++  V+ +A G+PLAL+V GS L       W SAV+++KR P   + + LKVSYD
Sbjct: 376 KCFEEITLEVVSHAEGLPLALKVWGSSLHKKDIHVWRSAVDRIKRNPSSKVVENLKVSYD 435

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMH 441
           GL+ E+Q IFLD ACF +G  Q  +   L++C F A  G+  L+ KSLV IS  + I MH
Sbjct: 436 GLEREDQEIFLDIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMH 495

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGI--------------- 486
           DL+QEMG  IV  +  KD G+ +RLW  +D  +  N        I               
Sbjct: 496 DLIQEMGKYIVTMQ--KDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIWIPEIQDLSFRK 553

Query: 487 ----NLDSLKELYLGGC-----SNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
               +++ L+ LY+ G      SN +  P    N+   D  +   E LP+   +   LV 
Sbjct: 554 KAMKDVEKLRILYINGFHTPDGSNDQYLPS---NLRWFDCCKYPWESLPAKF-DPDMLVH 609

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
           LDL   S L  + +       LRRL+LS C  L + P +  ++ +LEYL L E  + +++
Sbjct: 610 LDLQQ-SSLFHLWTGTKKFPFLRRLDLSSCANLMRTP-DFTDMPNLEYLGLEECSNLKEV 667

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH---CTSLKTL 640
             S++   KL  L L++CK L+S   + C  S+   H   C++L+  
Sbjct: 668 HHSLRCSKKLIKLNLRDCKNLESFSYV-CWESLECLHLQGCSNLEKF 713



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 4/122 (3%)

Query: 489 DSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSI-GNLSRLVDLDLTNCS 544
           +SL+ L+L GCSNL++FP I   ++   ++ ++ + I +LPS+I  + S L +LDL+   
Sbjct: 697 ESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMK 756

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L ++S  +  LKSL  L +S C KL+ LPEEIG+LE+LE L        + PSS+ +L+
Sbjct: 757 NLATLSCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLN 816

Query: 605 KL 606
           +L
Sbjct: 817 RL 818



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 18/152 (11%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKE---TAIEELPSSIGNLSRLVDLDLTNCS 544
           L SL  L +  CS LK  PE   ++E+L++ +   T I + PSSI  L+RL  L      
Sbjct: 768 LKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAKQK 827

Query: 545 ---GLKS--------VSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD 592
              GL+         V+  LC+LK+L   NLS C LK E LP++IG+L SLE LNL   +
Sbjct: 828 SEVGLEDEVHFVFPPVNQGLCSLKTL---NLSYCNLKDEGLPQDIGSLSSLEVLNLRGNN 884

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           FE +P S+ +LS L  L L +CK L  LPE P
Sbjct: 885 FEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFP 916



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 30/160 (18%)

Query: 491 LKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLK 547
           L+ L L  C+NL R P+ +   N+E L L+E + ++E+  S+    +L+ L+L +C  L+
Sbjct: 630 LRRLDLSSCANLMRTPDFTDMPNLEYLGLEECSNLKEVHHSLRCSKKLIKLNLRDCKNLE 689

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS-------- 599
           S S  +C  +SL  L+L GC  LEK P   G L+    + +      K+PS+        
Sbjct: 690 SFSY-VC-WESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSL 747

Query: 600 -------MKQLSKLS----------DLRLQNCKRLQSLPE 622
                  MK L+ LS           L++  C +L+SLPE
Sbjct: 748 TELDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKSLPE 787


>gi|356561829|ref|XP_003549179.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1090

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 253/721 (35%), Positives = 383/721 (53%), Gaps = 97/721 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+++ S    P   +DVFLSFRG D RH F  +L  AL    I TFIDD+ L RG+EI+
Sbjct: 44  MAATTRS----PASIYDVFLSFRGLDTRHGFTGNLYKALDDRGIYTFIDDQELPRGDEIT 99

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+LS AI+ S+I+I + S+ YASS +CL+ELV +L  K K G +V+PVFY VDPSD    
Sbjct: 100 PALSKAIQESRIAITVLSQNYASSSFCLDELVTVLLCKRK-GLLVIPVFYNVDPSDVRQQ 158

Query: 116 -AGYCPSLG---------------W-MGIFDIP-----------TSESVLIEGNVNDISK 147
              Y  ++                W M +  +              E   I+  V  +S+
Sbjct: 159 KGSYGEAMAKHQKRFKAKKEKLQKWRMALHQVADLSGYHFKDGDAYEYKFIQSIVEQVSR 218

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           +++   P    D  VG+ S + E+   L  GS +  + +GI G+GG+GKTT+A A+Y+ I
Sbjct: 219 EINRT-PLHVADYPVGLGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLI 277

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I+L       +  + RL R KV
Sbjct: 278 ALHFDESCFLQNVREESNKHGLKHLQSIILSKLLGEKDINLTSWQEGASMIQHRLQRKKV 337

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  ++GR D F PGSRVIITTRD  +LK H   R    +EVK L+ + 
Sbjct: 338 LLILDDVDKRQQLKAIVGRPDWFGPGSRVIITTRDKHILKYHEVERT---YEVKVLNQSA 394

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L   NAF +      + ++ N V+ YA+G+PLAL+++GS L G +  EWESA+   K
Sbjct: 395 ALQLLKWNAFKREKNDPSYEDVLNRVVTYASGLPLALEIIGSNLFGKTVAEWESAMEHYK 454

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGI 422
           R+P  +I ++LKVS+D L +E++N+FLD AC  KG      ++++    D C    K  I
Sbjct: 455 RIPSDEILEILKVSFDALGEEQKNVFLDIACCLKGCKLTEVEHMLRGLYDNC---MKHHI 511

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--T 480
             LV KSL  + +  + MHDL+Q+MG EI RQ S ++PGKR RLW P+DI QVL  N  T
Sbjct: 512 DVLVDKSLTKVRHGIVEMHDLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGT 571

Query: 481 SLPTGINLD-SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           S    I +D S+ +       N   F ++  N++ L ++     + P+      R+++  
Sbjct: 572 SKIEIIYVDFSISDKEETVEWNENAFMKME-NLKILIIRNGKFSKGPNYFPQGLRVLEWH 630

Query: 540 L--TNC--SGLKSVSSRLCNL---------------KSLRRLNLSGCLKLEKLPEEIGNL 580
              +NC  S    ++  +C L                SL+ L    C  L ++P ++ +L
Sbjct: 631 RYPSNCLPSNFDPINLVICKLPDSSMTSFEFHGSSKASLKILKFDWCKFLTQIP-DVSDL 689

Query: 581 ESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSL 637
            +L  L+    +    +  S+  L+KL  L    C++L S P L   S  ++   HC+SL
Sbjct: 690 PNLRELSFQWCESLVAVDDSIGFLNKLKKLNAYGCRKLTSFPPLHLTSLETLELSHCSSL 749

Query: 638 K 638
           +
Sbjct: 750 E 750



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 42/207 (20%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  ++L SL+ L L  CS+L+ FPEI     NIE LDL    I+ELP S  NL  L 
Sbjct: 728 TSFPP-LHLTSLETLELSHCSSLEYFPEILGEMENIERLDLHGLPIKELPFSFQNLIGLQ 786

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLESLE------- 584
            L +  C G+  +   L  +  L       C     ++ E+  E++G++ S E       
Sbjct: 787 QLSMFGC-GIVQLRCSLAMMPKLSAFKFVNCNRWQWVESEEAEEKVGSIISSEARFWTHS 845

Query: 585 ------------------------YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                                   YLNL+  +F  +P   K+L  L  L + +CK LQ +
Sbjct: 846 FSAKNCNLCDDFFLTGFKKFAHVGYLNLSRNNFTILPEFFKELQFLGSLNVSHCKHLQEI 905

Query: 621 PELPCGSSI-HARHCTSLKTLSNSSTL 646
             +P    + +AR+C SL + S S  L
Sbjct: 906 RGIPQNLRLFNARNCASLTSSSKSMLL 932



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 15/187 (8%)

Query: 490 SLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGL 546
           SLK L    C  L + P++S   N+ +L  +   ++  +  SIG L++L  L+   C  L
Sbjct: 668 SLKILKFDWCKFLTQIPDVSDLPNLRELSFQWCESLVAVDDSIGFLNKLKKLNAYGCRKL 727

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
            S      +L SL  L LS C  LE  PE +G +E++E L+L     +++P S + L  L
Sbjct: 728 TSFPP--LHLTSLETLELSHCSSLEYFPEILGEMENIERLDLHGLPIKELPFSFQNLIGL 785

Query: 607 SDLRLQNCKRLQ---SLPELPCGSSIHARHCTSLKTLSNS------STLLTRSSKHW-DI 656
             L +  C  +Q   SL  +P  S+    +C   + + +        ++++  ++ W   
Sbjct: 786 QQLSMFGCGIVQLRCSLAMMPKLSAFKFVNCNRWQWVESEEAEEKVGSIISSEARFWTHS 845

Query: 657 FNFSNCS 663
           F+  NC+
Sbjct: 846 FSAKNCN 852


>gi|357469181|ref|XP_003604875.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355505930|gb|AES87072.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 880

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 253/690 (36%), Positives = 364/690 (52%), Gaps = 88/690 (12%)

Query: 11  IPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGS 69
           +  PK +DVFLSFRG D    FVSHL+++L    I  F  D++ +G++IS SL  AI  S
Sbjct: 1   MSQPKVYDVFLSFRGDDGSAKFVSHLHSSLQNAGISVFRGDEIQQGDDISISLLRAIRHS 60

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG--- 126
           +ISIV+ S  YA+SRWC+ EL KI+E     G +VVPV Y VDPS+  +    G  G   
Sbjct: 61  RISIVVLSINYANSRWCMFELEKIMEIGRTGGLVVVPVLYEVDPSEVRHQE--GQFGKAL 118

Query: 127 ---IFDIPTSESV-------LIE----------------GNVNDISKKLSDLFPSDNKDQ 160
              I +I   ES        LI+                 ++ +I + ++ L   D  D 
Sbjct: 119 EDLILEISVDESTKSNWRRDLIDIGGKDGFIVTDSRNESADIKNIVEHVTRLL--DKTDL 176

Query: 161 LV-----GVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
            V     GV S ++++ + L +  S +   +GIWG+GG+GKTT+A AIY+ I   FEG  
Sbjct: 177 FVVEYPVGVRSRVEDVTNLLNIQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRS 236

Query: 215 FMQNIRDESE-----------------KVGGLANIHL----NFERRRLSRMKVLIVFYDL 253
           F+ NIR+  E                 K   L  + +    N  + RL++ +VL+V  D+
Sbjct: 237 FLLNIREVWETDTNQVSLQQQILCDVYKTTELKILDIESGKNLLKERLAQKRVLLVLDDV 296

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             L Q+  L G    F PGSRVIITTRD++LL   R  RV  V+ V E+   +SL LF  
Sbjct: 297 NKLDQLKALCGSRKWFGPGSRVIITTRDMRLL---RSCRVDLVYTVVEMDERESLELFCW 353

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AF Q  P  GF   S  VI Y+ G+PLALQVLGSYL G    EW+  + KLK +PH  +
Sbjct: 354 HAFKQPCPPEGFATHSRDVIVYSGGLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQV 413

Query: 374 QKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           QK LKVS+DGL D  E+ IF D ACFF G D+  ++  L+ C +   IGI  LV +SLVT
Sbjct: 414 QKKLKVSFDGLKDVTEKQIFFDIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVT 473

Query: 433 IS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD 489
           +   NK+ MHDLL++MG +IV +ES   P  RSRLW  E+++ +L  ++ T    G+ L+
Sbjct: 474 VDIGNKLRMHDLLRDMGRQIVYEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALE 533

Query: 490 ----------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
                            L+ L L G      F  +S +++ L         +P+    L 
Sbjct: 534 FPREVCLETKSFKKMNKLRLLRLAGVKLKGDFKYLSGDLKWLYWHGFPETYVPAEF-QLG 592

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
            LV ++L   S LK + ++   L++L+ LNLS  L L + P +   + +LE L L +   
Sbjct: 593 SLVVMEL-KYSKLKQIWNKSQMLENLKVLNLSHSLDLTETP-DFSYMPNLEKLILEDCPS 650

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
              +  S+  L K+  + L +C  L++LP+
Sbjct: 651 LSTVSHSIGSLHKILLINLTDCTGLRTLPK 680



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 82/120 (68%), Gaps = 4/120 (3%)

Query: 1   MASSSSSINMIPH--PK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGN 56
           + +  ++I  +P   PK +DVFLSFRG+D R  F+SHL+++L    I  F DD  + RG+
Sbjct: 714 LIADKTAIPEVPSSLPKMYDVFLSFRGEDNRPRFISHLHSSLHSAGIYAFKDDDGIQRGD 773

Query: 57  EISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           +IS SL  AIE S+ISIV+ S  YA+SRWC+ EL KI+E     G++VVPVFY VDPS+ 
Sbjct: 774 QISVSLGKAIEQSRISIVVLSTNYANSRWCMLELEKIMEVGRMNGRVVVPVFYDVDPSEV 833



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 73/119 (61%), Gaps = 4/119 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L++LK L L    +L   P+ S   N+E L L++  ++  +  SIG+L +++ ++LT+C+
Sbjct: 614 LENLKVLNLSHSLDLTETPDFSYMPNLEKLILEDCPSLSTVSHSIGSLHKILLINLTDCT 673

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           GL+++   +  LKSL  L LSGC  L+KL E++  +ESL  L   +    ++PSS+ ++
Sbjct: 674 GLRTLPKSIYKLKSLATLILSGCSMLDKL-EDLEQMESLTTLIADKTAIPEVPSSLPKM 731


>gi|111146892|gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
          Length = 1133

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 263/706 (37%), Positives = 360/706 (50%), Gaps = 113/706 (16%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
           VFLSFRG+D R  F  HL A+L R+ I+TF DD  L RG  IS  L  AIE S  +++I 
Sbjct: 23  VFLSFRGEDTRRGFTDHLFASLERKGIKTFKDDHDLERGKAISVELMKAIEDSMFALIIL 82

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS--------------- 121
           S  YASS WCL+EL KI+E + +      P+F+ VDPSD  +                  
Sbjct: 83  SPNYASSTWCLDELQKIVECEKE----AFPIFHGVDPSDVRHQRGSFAKAFQEHEEKFRE 138

Query: 122 ---------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                            + G       E+ LIE  V  I KKL    P    D LVGV+S
Sbjct: 139 DKEKVERWRDALRQVASYSGWDSKDQHEATLIETIVGQIQKKLIPRLPCFT-DNLVGVDS 197

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            +KE+ S +     +   +GIWG+GGIGKTTIA  +Y  +   F+ S F++NIR+ S K 
Sbjct: 198 RMKELNSLVDIWLNDIRFIGIWGMGGIGKTTIARLVYEAVKEKFKVSCFLENIRELS-KT 256

Query: 227 GGLANI------HLNFERR--------------RLSRMKVLIVFYDLTDLKQIDLLIGRL 266
            GL +I      HLN                   LS  KVL+V  D++D+ Q++ L G+ 
Sbjct: 257 NGLVHIQKEILSHLNVRSNDFCNLYDGKKIIANSLSNKKVLLVLDDVSDISQLENLGGKR 316

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
           + F PGSR+IITTRD  LLK +    V   ++ + L+ N++L LF   AF Q+ P  G+L
Sbjct: 317 EWFGPGSRLIITTRDKHLLKTYG---VDMTYKARGLAQNEALQLFCLKAFKQDQPKEGYL 373

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
            L   V++YA G+PLAL+VLGS+L G S E W SA+ +++  PH  IQ  LK+SYD L+ 
Sbjct: 374 NLCKGVVEYARGLPLALEVLGSHLCGRSTEVWHSALEQIRSFPHSKIQDTLKISYDSLEP 433

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI--SNNKITMHDLL 444
            E+ +FLD ACFF G D   V+N L+ C     IGI  L+ +SLVT+  + NK+ MHDLL
Sbjct: 434 TEKKLFLDIACFFVGMDIDEVVNILENCGDHPIIGIDILIERSLVTLDMTKNKLGMHDLL 493

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN------------------------- 479
           QEMG  IV QES  DPGKRSRLW  +DI  VL +N                         
Sbjct: 494 QEMGRNIVYQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIRGIVLNLVQPYDCEARWNT 553

Query: 480 ----------------TSLPTGINL--DSLKELYLGGCSNLKRFPEISCNIE---DLDLK 518
                             LP G+N    +LK ++  GC  LK  P +S  ++   DL L 
Sbjct: 554 ESFSKISQLRLLKLCDMQLPRGLNCLPSALKVVHWRGCP-LKTLP-LSNQLDEVVDLKLP 611

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            + IE+L      L +L  ++L+    LK  S     + +L  L L GC  L ++   + 
Sbjct: 612 YSKIEQLWHGTELLEKLRFINLSFSKNLKQ-SPDFVGVPNLESLVLKGCTSLTEVHPSLV 670

Query: 579 NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             + L +LN  + K  + +P  M ++S L+DL L  C   + LPE 
Sbjct: 671 RHKKLVWLNFEDCKKLKTLPRKM-EMSSLNDLNLSGCSEFKCLPEF 715



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 32/188 (17%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           LP  I+ L SL  L + GCS L   PE    I C +E+LD  ETAI+ELPS +  L  L 
Sbjct: 759 LPDTIHKLRSLIVLNVSGCSKLSSLPEGLKEIKC-LEELDASETAIQELPSFVFYLENLR 817

Query: 537 DLDLTNCSGL--KSVSS------------------RL----CNLKSLRRLNLSGC-LKLE 571
           D+ +  C G   KSV+S                  RL     +L SL+R+NLS C L  E
Sbjct: 818 DISVAGCKGPVSKSVNSFFLPFKRLFGNQQTSIGFRLPPSALSLPSLKRINLSYCNLSEE 877

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
             P +  +L SL  LNL   +F  +PS + +L+KL  L L +CK+LQ+LP+LP     + 
Sbjct: 878 SFPGDFCSLSSLMILNLTGNNFVSLPSCISKLAKLEHLILNSCKKLQTLPKLPSNMRGLD 937

Query: 631 ARHCTSLK 638
           A +CTS +
Sbjct: 938 ASNCTSFE 945



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 3/138 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           +LP  + + SL +L L GCS  K  PE + ++E L    L+ TAI +LP+S+G L  L  
Sbjct: 688 TLPRKMEMSSLNDLNLSGCSEFKCLPEFAESMEHLSVLCLEGTAITKLPTSLGCLIGLSH 747

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LD  NC  L  +   +  L+SL  LN+SGC KL  LPE +  ++ LE L+ +E   +++P
Sbjct: 748 LDTKNCKNLVCLPDTIHKLRSLIVLNVSGCSKLSSLPEGLKEIKCLEELDASETAIQELP 807

Query: 598 SSMKQLSKLSDLRLQNCK 615
           S +  L  L D+ +  CK
Sbjct: 808 SFVFYLENLRDISVAGCK 825



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 4/138 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L+ L+ + L    NLK+ P+     N+E L LK  T++ E+  S+    +LV L+  +C 
Sbjct: 625 LEKLRFINLSFSKNLKQSPDFVGVPNLESLVLKGCTSLTEVHPSLVRHKKLVWLNFEDCK 684

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK++  ++  + SL  LNLSGC + + LPE   ++E L  L L      K+P+S+  L 
Sbjct: 685 KLKTLPRKM-EMSSLNDLNLSGCSEFKCLPEFAESMEHLSVLCLEGTAITKLPTSLGCLI 743

Query: 605 KLSDLRLQNCKRLQSLPE 622
            LS L  +NCK L  LP+
Sbjct: 744 GLSHLDTKNCKNLVCLPD 761


>gi|334185068|ref|NP_187072.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332640533|gb|AEE74054.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 867

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 250/735 (34%), Positives = 372/735 (50%), Gaps = 110/735 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF SFRG+DVR +F+SH+     R+ I  F+D+ + RG  I P L  AI GSKI+I+
Sbjct: 62  KYDVFPSFRGEDVRKDFLSHIQKEFQRQGITPFVDNNIKRGESIGPELIRAIRGSKIAII 121

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YCPSL 122
           + S+ YASS WCL+ELV+I++ K + GQ V+ +FY VDPS       D G      C   
Sbjct: 122 LLSKNYASSSWCLDELVEIIKCKEEMGQTVIVIFYKVDPSLVKKLTGDFGKVFRNTCKGK 181

Query: 123 ------GWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   F    +           ES +IE  V+DIS+ L+   PS + D L+G+ 
Sbjct: 182 ERENIERWREAFKKVATIAGYDSRKWDNESGMIEKIVSDISEMLNHSTPSRDFDDLIGMG 241

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
             +++++  L   S E  T+GIWG  G+GKTTIA ++Y+  S  F+ S FM++I+     
Sbjct: 242 DHMEKMKPLLDIDSDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAYTI 301

Query: 221 -----DESEK----------VGGLANI---HLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                D  EK          +    N+   HL   + RL+  KVL+V  D+    Q+D L
Sbjct: 302 PACSDDYYEKLQLQQRFLSQITNQENVQIPHLGVAQERLNDKKVLVVIDDVNQSVQVDAL 361

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
               D   PGSR+IITT+D  +L+ H    + H++EV   +Y ++L +F  +AFGQ  P 
Sbjct: 362 AKENDWLGPGSRIIITTQDRGILRAHG---IEHIYEVDYPNYEEALQIFCMHAFGQKSPY 418

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD--IQKVLKVS 380
            GF EL+  V   +  +PL L+V+GSY +GM+++EW  A+ +++   H+D  I+ +LK+S
Sbjct: 419 DGFEELAQQVTTLSGRLPLGLKVMGSYFRGMTKQEWTMALPRVR--THLDGKIESILKLS 476

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           YD L D ++++FL  AC F  +D  LV   L       + G+  L  KSL+ +    I M
Sbjct: 477 YDALCDVDKSLFLHLACSFHNDDTELVEQQLGKKFSDLRQGLHVLAEKSLIHMDLRLIRM 536

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD----------S 490
           H LL ++G EIVR++SI +PG+R  L    DI +VL ++T   + I +D           
Sbjct: 537 HVLLAQLGREIVRKQSIHEPGQRQFLVDATDIREVLTDDTGSRSVIGIDFDFNTMEKELD 596

Query: 491 LKELYLGGCSNLK--------------------------------RFPEISCNIEDLDLK 518
           + E    G SNL+                                 FP     ++ L  K
Sbjct: 597 ISEKAFRGMSNLQFIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFPR---GLDYLPGK 653

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            + +E+L   I  L  L  LDLT    LK +   L    +L+RL++  C  L KLP  IG
Sbjct: 654 LSKLEKLWEGIQPLRNLEWLDLTCSRNLKELPD-LSTATNLQRLSIERCSSLVKLPSSIG 712

Query: 579 NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARH 633
              +L+ +NL E     ++PSS   L+ L +L L+ C  L  LP     L    S+    
Sbjct: 713 EATNLKKINLRECLSLVELPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLEFYE 772

Query: 634 CTSLKTLSNSSTLLT 648
           C+SL  L ++   LT
Sbjct: 773 CSSLVKLPSTFGNLT 787



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 12/171 (7%)

Query: 476 LNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKET-AIEELPSSIGN 531
           L E   L T  NL   + L +  CS+L + P     + N++ ++L+E  ++ ELPSS GN
Sbjct: 681 LKELPDLSTATNL---QRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGN 737

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
           L+ L +LDL  CS L  + +   NL ++  L    C  L KLP   GNL +L  L L E 
Sbjct: 738 LTNLQELDLRECSSLVELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLREC 797

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSL 637
               ++PSS   L+ L  L L+ C  L  LP     L    ++  R C+SL
Sbjct: 798 SSMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSL 848


>gi|357513733|ref|XP_003627155.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355521177|gb|AET01631.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1223

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 246/693 (35%), Positives = 363/693 (52%), Gaps = 100/693 (14%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSK 70
           I H K+DVF+SFRG+D R NF + L+ AL    IE++ID  L +G+E+ P+L+ AI+ S 
Sbjct: 3   ISHKKYDVFISFRGEDTRTNFTAQLHQALSDRSIESYIDYNLVKGDEVGPALTKAIDDSH 62

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGY 118
           +S+V+FS+ YA+S+WCL+ELV IL+ +   G +V+PVFY +DPS             A +
Sbjct: 63  MSLVVFSKDYATSKWCLDELVHILQCRKLNGHVVIPVFYNIDPSHVRHQKESYQMAFARF 122

Query: 119 CPSLG-----------WMGIFDIPTS----------ESVLIEGN-VNDISKKLSDLFPSD 156
              L            W    ++  +          +   + GN V D+ +KL+ ++P++
Sbjct: 123 ERELAHSKSHVDKVSEWKAALNLAANISGWDSRKYRDDTQVIGNIVEDVLQKLALMYPNE 182

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
            KD +V V+   + IE  L +       +GIWG+ GIGKTTIA  ++S   +H++   F+
Sbjct: 183 LKD-IVKVDENSEHIELLLKT----IPRIGIWGMSGIGKTTIAKQMFSKNFAHYDNVCFL 237

Query: 217 QNIRDESEKVGGL-----------------ANIH--LNFERRRLSRMKVLIVFYDLTDLK 257
           + I ++SEK G +                 +++H    F  RRL R KV IV  D+ +  
Sbjct: 238 EKISEDSEKFGPIYVCNQLLRELLKREITASDVHGLHTFITRRLFRKKVFIVLDDVNNTT 297

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+D L   L    P SR+IITTRD   L    G +V  ++EVK     DSL LFS  AF 
Sbjct: 298 QLDDLCRVLGDLGPNSRLIITTRDRHTL----GGKVDEIYEVKTWKLRDSLKLFSLRAFK 353

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV----NKLKRMPHMDI 373
           Q+HP  G+  +S   ++ A GVPLAL+VLGS+     +E WES +    NK +  P  DI
Sbjct: 354 QDHPLKGYERVSERAVECAGGVPLALEVLGSHFHSRKQEFWESELNLYENKGEAFP--DI 411

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           QKVL+ SY+GL   ++ +FLD A FFKG ++ +V   LDA  F+A  GI  L  K+L+TI
Sbjct: 412 QKVLRTSYNGLSWRQKEMFLDIAFFFKGENKDIVTRILDAFGFNATSGIEILEDKTLITI 471

Query: 434 SNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN------------- 479
           SNN +I MHDLLQ+M  +IVR+E   D GKRSRL   +DI  VL  N             
Sbjct: 472 SNNDRIQMHDLLQKMAFDIVREE-YNDRGKRSRLRDAKDICDVLGNNKGSDAIEGIIFDL 530

Query: 480 -TSLPTGINLDSLKELYL---------GGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
              +   +  D+ K ++           G   L+ F   +  +  + L  + IE L   +
Sbjct: 531 SQKVDIHVQADAFKLMHKLRFLKFHIPKGKKKLEPFH--AEQLIQICLPHSNIEHLWYGM 588

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
             L  L  +DL+ C  L+ +      LK L++L LSGC +L +L     + ++L  L L 
Sbjct: 589 QELVNLEAIDLSECKQLRHLPDLSGALK-LKQLRLSGCEELCELRPSAFSKDTLHTLLLD 647

Query: 590 EKDFEKIPSSM--KQLSKLSDLRLQNCKRLQSL 620
                K+ S M  K L+ L    ++ CK L+  
Sbjct: 648 R--CIKLESLMGEKHLTSLKYFSVKGCKNLKEF 678



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 2/110 (1%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L SLK   + GC NLK F   S +I+ LDL +T IE L  SIG+++ L  L+L + + L
Sbjct: 660 HLTSLKYFSVKGCKNLKEFSLSSDSIKGLDLSKTGIEILHPSIGDMNNLRLLNLEDLN-L 718

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE-SLEYLNLAEKDFEK 595
            ++   L +L+SL  L +S C    ++    GNL+  LE     E  FE+
Sbjct: 719 TNLPIELSHLRSLTELRVSTCSSESQIVLGTGNLDKDLELELYQEIQFER 768


>gi|357462143|ref|XP_003601353.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355490401|gb|AES71604.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1133

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 252/699 (36%), Positives = 358/699 (51%), Gaps = 104/699 (14%)

Query: 14  PKH-DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKI 71
           PK  DVF+SFRG+D R NF SHL  AL + K+ TFIDD +L +G+EIS +L  AIE S  
Sbjct: 80  PKEFDVFISFRGEDTRRNFTSHLYEALSK-KVITFIDDNELEKGDEISSALIKAIEKSSA 138

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL---- 122
           SIVIFS+ YASS+WCLNELVKILE K   GQIV+PVFY +DPS        Y  +     
Sbjct: 139 SIVIFSKDYASSKWCLNELVKILECKKDNGQIVIPVFYEIDPSHVRNQKGSYMLAFEKHE 198

Query: 123 ------------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                                   GW        ++S+ I+  + D+ KKL+   P +  
Sbjct: 199 QDLKQSKDKLQKWKDALTEAANLAGWYS--QNYKNDSIFIKYIIEDVLKKLNLRHPFEVN 256

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             L G+E   +E++S L  GS +   +G+WG+GGIGKTT+A  +YS + S F+    ++N
Sbjct: 257 GHLFGIEEKYEEVKSLLKIGSNDVRGLGLWGMGGIGKTTLAKHLYSKLCSQFDHHCLLEN 316

Query: 219 IRDESEKVG-----------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           + +ES + G                    N+      RRL   K LIV  D+  L+Q + 
Sbjct: 317 VSEESTRCGLKGVRNQLFSKLLELRPDAPNLETTISMRRLVCKKSLIVLDDVATLEQAEN 376

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L    +   PGSRVI+TTRD Q+           ++EVK L+ ++SL +F   AF + +P
Sbjct: 377 LNIVNNCLGPGSRVIVTTRDKQVCSQFNKC---AIYEVKRLNKDESLEVFCLEAFREKYP 433

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             G+ +LS   I Y  G PL L+VLG+  +  S+E WES + KLK++P+  I  VLK+S+
Sbjct: 434 KIGYGDLSKRAIGYCGGNPLGLKVLGTNFRTKSKEVWESELEKLKKIPNRRIHDVLKLSF 493

Query: 382 DGLDDEEQNIFLDTACFF---KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNK 437
           DGLD  +Q+IFLD  CFF   K  D+  +    DA  F A+ GI  L  K+L+     N 
Sbjct: 494 DGLDCTQQDIFLDIVCFFFLGKYIDRDFLTTLSDASNFFAESGIEVLSNKALIVFRICNL 553

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD--SLKE 493
           I MHDLL EMG EIV+Q+S K+PG RSRLW P ++   L   + T +   I  D   +++
Sbjct: 554 IDMHDLLVEMGREIVKQQSPKNPGSRSRLWDPMEVCDTLKYKKGTEVVEVIIFDISEIRD 613

Query: 494 LYLGGCS-------------NLKRFPE---------------ISCNIEDLDLKETAIEEL 525
           LYL   S             N  + P+               +S  +  L      +E L
Sbjct: 614 LYLTSDSFKSMTNLRCLHIFNKMQLPDEGKHYNVHFLQGLEWLSDKLRHLYWVGFPLESL 673

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           PS+  +   LV L++   S LK +   +  L +L+ ++L     L ++P    +L     
Sbjct: 674 PSTF-SAEWLVRLEMRG-SKLKKLWDGIQKLGNLKSIDLCYSKDLIEMP----DLSRAPK 727

Query: 586 LNLAEKDF----EKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           L+L   DF     K+  S+    KL  L L+ CK ++SL
Sbjct: 728 LSLVSLDFCESLSKLHPSILTAPKLEALLLRGCKNIESL 766



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 12/166 (7%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS-----SIGNLSRL 535
           SL T I+  SL+ L L  CS+L  F  +S  +E+L L +T   E  S     S G + R 
Sbjct: 765 SLKTNISSKSLRRLDLTDCSSLVEFSMMSEKMEELSLIQTFKLECWSFMFCKSSGQI-RP 823

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL--EKLPEEIGNLESLEYLNLAE-KD 592
             L L+ C  L  + S+L N   L  L L GC ++    L   +  L  L  LNL+   +
Sbjct: 824 SCLSLSRCKKLNIIGSKLSN--DLMDLELVGCPQINTSNLSLILDELRCLRELNLSSCSN 881

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSL 637
            E +P +++  SKL+ L L  C++L+SLP+LP   + + A +CT L
Sbjct: 882 LEALPENIQNNSKLAVLNLDECRKLKSLPKLPASLTELRAINCTDL 927


>gi|307135796|gb|ADN33675.1| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 1393

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 263/784 (33%), Positives = 388/784 (49%), Gaps = 148/784 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLS+RG+D R NF SHL+ AL ++ +  FIDDKL RG +IS +L  +I+ + ISI+I
Sbjct: 17  YDVFLSYRGEDTRTNFTSHLDMALRQKGVNVFIDDKLERGKQISETLLKSIQEALISIII 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------- 123
           FS+ YASS WCL+ELV I+E K    QIV+PVFY VDPSD       +  +L        
Sbjct: 77  FSQNYASSSWCLDELVNIIECKKSKDQIVLPVFYKVDPSDIRKQSGSFGEALAKHQAKFK 136

Query: 124 -----W---------MGIFDIPTSESVLIEGNVNDISKKLSDL----FPSDNKDQLVGVE 165
                W         +  +D+ T +   + G++  + K LS L     P       VG++
Sbjct: 137 TKIQIWREALTTAANLSGWDLGTRKEADLIGDI--VKKVLSTLNRTCMPLYVAKYPVGID 194

Query: 166 SIIKEIESQ-------------LLSGSTEFNTVGIWGIGGIG-----KTTIASAIYSNIS 207
           S ++ I+ +                   EF+T GI+ +G  G     KTT+A A+Y+ I+
Sbjct: 195 SKLEYIKLRSHNMFEKNNKFHYRTQHEYEFDT-GIYMVGIYGIGGIGKTTLAKALYNKIA 253

Query: 208 SHFEGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVL 247
           S FEG  F+ N+R+ S++  GLA +                     +N  R RL   KVL
Sbjct: 254 SQFEGCCFLSNVREASKQFNGLAQLQESLLYEILMVDLKVVNLDRGINIIRNRLCSKKVL 313

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           IV  D+  L+Q++ L+G  D F  GSR+I+TTR+  LL +H    + ++  + E   + +
Sbjct: 314 IVLDDVDKLEQLEALVGGCDWFGKGSRIIVTTRNKHLLFSHGFDEIHNILGLNE---DKA 370

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           + LFS +AF +N P++ +L+LS     Y  G PLAL VLGS+L    + EW S +++ + 
Sbjct: 371 IELFSWHAFKKNRPSSNYLDLSKRATSYCKGHPLALVVLGSFLCIRDQAEWCSILDEFEN 430

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
             + DI+ +L++S+DGL+D+ ++IFLD +C   G     V + L AC  +   G+  L+ 
Sbjct: 431 SLNKDIKDILQLSFDGLEDKIKDIFLDISCLLVGEKVEYVKDMLGACHVNLDFGVIVLMD 490

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTG 485
            SL+TI N+K+ MHDL+++MG +IV  ES+ + GKRSRLW  +D+++VL  N  T     
Sbjct: 491 LSLITIENDKVQMHDLIKQMGQKIVCGESL-ELGKRSRLWLVQDVWEVLVNNSGTDAIKA 549

Query: 486 INLDSLKELYLGGCSNLKR---------------------------------FPE----- 507
           I LD      LG  S   R                                 FP+     
Sbjct: 550 IKLDFPNPTRLGVNSQAFRKMKNLRLLIVQNARFSTKIEYLPDSLKWIKWHGFPQPTLPS 609

Query: 508 --ISCNIEDLDLK------------------------ETAIEELPSSIGNLSRLVDLDLT 541
             I+ N+  LDL+                         T +E++P +    S L +L L 
Sbjct: 610 CFITKNLVGLDLQYSFMKTFGKRLEDCKRLKHVDLSHSTFLEKIP-NFSAASNLEELYLI 668

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
           NC  L  +   + +L  L  LNL+GC  L+KLP     L SL YLNL+  K  EKIP   
Sbjct: 669 NCKNLGMIDKSVFSLDKLTILNLAGCSNLKKLPRGYFILRSLRYLNLSHCKKLEKIP-DF 727

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDI--FN 658
              S L +L L NC  L+ + +     S+H     +L   SN   L T   K W +   N
Sbjct: 728 SAASNLEELYLFNCTNLRMIDK--SVFSLHKLTILNLDVCSNLKKLPTSYYKLWSLQYLN 785

Query: 659 FSNC 662
            S C
Sbjct: 786 LSYC 789



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 5/144 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LPT    L SL+ L L  C  L++ P++S   N++ L L E T +  +  S+G+L +L+D
Sbjct: 771 LPTSYYKLWSLQYLNLSYCKKLEKIPDLSAASNLQSLCLHECTNLRLIHESVGSLYKLID 830

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           +DL+ C+ L  + + L  LKSLR L LS C KLE  P    N+ESL  L++     +++P
Sbjct: 831 MDLSGCTNLAKLPTYL-RLKSLRYLGLSECCKLESFPSIAENMESLRELDMDFTAIKELP 889

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP 621
           SS+  L++L  L L  C  L SLP
Sbjct: 890 SSIGYLTQLYRLNLTGCTNLISLP 913



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 98/216 (45%), Gaps = 60/216 (27%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            LPT + L SL+ L L  C  L+ FP I+ N+E   +LD+  TAI+ELPSSIG L++L  L
Sbjct: 842  LPTYLRLKSLRYLGLSECCKLESFPSIAENMESLRELDMDFTAIKELPSSIGYLTQLYRL 901

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI---------------GNLESL 583
            +LT C+ L S+ + +  L++L +L LSGC + E  P +                    SL
Sbjct: 902  NLTGCTNLISLPNTIYLLRNLDKLLLSGCSRFEMFPHKWDPTIQPVCSPSKMMEATSWSL 961

Query: 584  EY-----------------------------------------LNLAEKDFEKIPSSMKQ 602
            EY                                         L L+E  F  +PS + +
Sbjct: 962  EYPHLLPNESLCSHFTLLDLQSCNISNAKFLEILCDVAPFLSDLRLSENKFSSLPSCLHK 1021

Query: 603  LSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSL 637
               L +L L+NCK LQ +P LP    ++ A  C SL
Sbjct: 1022 FMSLWNLELKNCKFLQEIPNLPQNIQNLDASGCKSL 1057



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 9/160 (5%)

Query: 470 EDIYQVLNENTSL--PTGINLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETA-IE 523
           E++Y +  +N  +   +  +LD L  L L GCSNLK+ P    I  ++  L+L     +E
Sbjct: 663 EELYLINCKNLGMIDKSVFSLDKLTILNLAGCSNLKKLPRGYFILRSLRYLNLSHCKKLE 722

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           ++P      S L +L L NC+ L+ +   + +L  L  LNL  C  L+KLP     L SL
Sbjct: 723 KIPD-FSAASNLEELYLFNCTNLRMIDKSVFSLHKLTILNLDVCSNLKKLPTSYYKLWSL 781

Query: 584 EYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +YLNL+  K  EKIP  +   S L  L L  C  L+ + E
Sbjct: 782 QYLNLSYCKKLEKIP-DLSAASNLQSLCLHECTNLRLIHE 820



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 30/183 (16%)

Query: 491 LKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLK 547
           LK + L   + L++ P  S   N+E+L L     +  +  S+ +L +L  L+L  CS LK
Sbjct: 639 LKHVDLSHSTFLEKIPNFSAASNLEELYLINCKNLGMIDKSVFSLDKLTILNLAGCSNLK 698

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAE--------------- 590
            +      L+SLR LNLS C KLEK+P+     NLE L   N                  
Sbjct: 699 KLPRGYFILRSLRYLNLSHCKKLEKIPDFSAASNLEELYLFNCTNLRMIDKSVFSLHKLT 758

Query: 591 -------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTL 640
                   + +K+P+S  +L  L  L L  CK+L+ +P+L   S++ +     CT+L+ +
Sbjct: 759 ILNLDVCSNLKKLPTSYYKLWSLQYLNLSYCKKLEKIPDLSAASNLQSLCLHECTNLRLI 818

Query: 641 SNS 643
             S
Sbjct: 819 HES 821



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 7/85 (8%)

Query: 504  RFPEISCNI----EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
            +F EI C++     DL L E     LPS +     L +L+L NC  L+ + +   N+++ 
Sbjct: 990  KFLEILCDVAPFLSDLRLSENKFSSLPSCLHKFMSLWNLELKNCKFLQEIPNLPQNIQN- 1048

Query: 560  RRLNLSGCLKLEKLPEEIGNLESLE 584
              L+ SGC  L + P+ I ++ S++
Sbjct: 1049 --LDASGCKSLARSPDNIMDIISIK 1071


>gi|27764536|gb|AAO23066.1| R 3 protein [Glycine max]
          Length = 897

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 253/729 (34%), Positives = 369/729 (50%), Gaps = 122/729 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+++ S    P   +DVFLSFRG D RH F  +L  AL    I TFIDD+ L RG+EI+
Sbjct: 1   MAATTRS----PASIYDVFLSFRGLDTRHGFTGNLYKALDDRGIYTFIDDQELPRGDEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+LS AI+ S+I+I + S+ YASS +CL+ELV +L  K K G +V+PVFY VDPSD    
Sbjct: 57  PALSKAIQESRIAITVLSQNYASSSFCLDELVTVLLCKRK-GLLVIPVFYNVDPSDVRQQ 115

Query: 116 -AGYCPSLG---------------W-MGIFDIP-----------TSESVLIEGNVNDISK 147
              Y  ++                W M +  +              E   I+  V  +S+
Sbjct: 116 KGSYGEAMAKHQKRFKAKKEKLQKWRMALHQVADLSGYHFKDGDAYEYKFIQSIVEQVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           +++   P    D  VG+ S + E+   L  GS +  + +GI G+GG+GKTT+A A+Y+ I
Sbjct: 176 EINRT-PLHVADYPVGLGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I+L       +  + RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHLQSIILSKLLGEKDINLTSWQEGASMIQHRLQRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  ++GR D F PGSRVIITTRD  +LK H   R    +EVK L+ + 
Sbjct: 295 LLILDDVDKRQQLKAIVGRPDWFGPGSRVIITTRDKHILKYHEVERT---YEVKVLNQSA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L   NAF +      + ++ N V+ YA+G+PLAL+++GS L G +  EWESA+   K
Sbjct: 352 ALQLLKWNAFKREKNDPSYEDVLNRVVTYASGLPLALEIIGSNLFGKTVAEWESAMEHYK 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGI 422
           R+P  +I ++LKVS+D L +E++N+FLD AC  KG      ++++    D C    K  I
Sbjct: 412 RIPSDEILEILKVSFDALGEEQKNVFLDIACCLKGCKLTEVEHMLRGLYDNC---MKHHI 468

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
             LV KSL  + +  + MHDL+Q+MG EI RQ S ++PGKR RLW P+DI QVL  NT  
Sbjct: 469 DVLVDKSLTKVRHGIVEMHDLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNTGT 528

Query: 483 P-----------------------TGINLDSLKELYL--GGCSN-------------LKR 504
                                     + +++LK L +  G  S                R
Sbjct: 529 SKIEIIYVDFSISDKEETVEWNENAFMKMENLKILIIRNGKFSKGPNYFPQGLRVLEWHR 588

Query: 505 FPEISCNIEDLDLKETAIEELPSS---------IGNLSRLVDLDLTNCSGLKSVSSRLCN 555
           +P  +C   + D     I +LP S            L  L  L    C  L  +   + +
Sbjct: 589 YPS-NCLPSNFDPINLVICKLPDSSMTSFEFHGSSKLGHLTVLKFDWCKFLTQIPD-VSD 646

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRLQNC 614
           L +LR L+   C  L  + + IG L  L+ LN    +     P     L+ L  L L +C
Sbjct: 647 LPNLRELSFQWCESLVAVDDSIGFLNKLKKLNAYGCRKLTSFPPL--HLTSLETLELSHC 704

Query: 615 KRLQSLPEL 623
             L+  PE+
Sbjct: 705 SSLEYFPEI 713



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 42/207 (20%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  ++L SL+ L L  CS+L+ FPEI     NIE LDL    I+ELP S  NL  L 
Sbjct: 686 TSFPP-LHLTSLETLELSHCSSLEYFPEILGEMENIERLDLHGLPIKELPFSFQNLIGLQ 744

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLESLE------- 584
            L +  C G+  +   L  +  L       C     ++ E+  E++G++ S E       
Sbjct: 745 QLSMFGC-GIVQLRCSLAMMPKLSAFKFVNCNRWQWVESEEAEEKVGSIISSEARFWTHS 803

Query: 585 ------------------------YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                                   YLNL+  +F  +P   K+L  L  L + +CK LQ +
Sbjct: 804 FSAKNCNLCDDFFLTGFKKFAHVGYLNLSRNNFTILPEFFKELQFLGSLNVSHCKHLQEI 863

Query: 621 PELPCGSSI-HARHCTSLKTLSNSSTL 646
             +P    + +AR+C SL + S S  L
Sbjct: 864 RGIPQNLRLFNARNCASLTSSSKSMLL 890



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 15/189 (7%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  L  L    C  L + P++S   N+ +L  +   ++  +  SIG L++L  L+   C 
Sbjct: 624 LGHLTVLKFDWCKFLTQIPDVSDLPNLRELSFQWCESLVAVDDSIGFLNKLKKLNAYGCR 683

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L S      +L SL  L LS C  LE  PE +G +E++E L+L     +++P S + L 
Sbjct: 684 KLTSFPP--LHLTSLETLELSHCSSLEYFPEILGEMENIERLDLHGLPIKELPFSFQNLI 741

Query: 605 KLSDLRLQNCKRLQ---SLPELPCGSSIHARHCTSLKTLSNSS------TLLTRSSKHW- 654
            L  L +  C  +Q   SL  +P  S+    +C   + + +        ++++  ++ W 
Sbjct: 742 GLQQLSMFGCGIVQLRCSLAMMPKLSAFKFVNCNRWQWVESEEAEEKVGSIISSEARFWT 801

Query: 655 DIFNFSNCS 663
             F+  NC+
Sbjct: 802 HSFSAKNCN 810


>gi|356577841|ref|XP_003557030.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like,
           partial [Glycine max]
          Length = 1034

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 239/703 (33%), Positives = 361/703 (51%), Gaps = 101/703 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVFLSFRG D+R   +SHL AAL    + TF D+K  RG  I PSL  AI GSKI I+
Sbjct: 10  QYDVFLSFRGTDIRSGVLSHLIAALSNAGVNTFEDEKFERGERIMPSLLRAIAGSKIHII 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           +FS  YASS+WCL+ELVKI+E    YG  V+PVFY VDPSD                   
Sbjct: 70  LFSNNYASSKWCLDELVKIMECHRTYGNEVLPVFYNVDPSDVRNQRGDFGQGLEALAQRY 129

Query: 117 ----------GYCPSL-------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                      +  +L       GW+       +++ L+E  V DI +KL D+      D
Sbjct: 130 LLQGENDVLKSWKSALNEAANLAGWVS--RNYRTDADLVEDIVEDIIEKL-DMHLLPITD 186

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN----------ISSH 209
             VG+ES + ++   +   S     +GIWG+GG+GKTTIA +IY+           I ++
Sbjct: 187 FPVGLESRVPKLIKFVDDQSGRGCVIGIWGMGGLGKTTIAKSIYNEFRRQRFRRSFIETN 246

Query: 210 FEGSYFMQ-----NIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
            +G   +Q     ++     K+  +A + ++   ++L   + LI+  D+T+ +Q+  L G
Sbjct: 247 NKGHTDLQEKLLSDVLKTKVKIHSVA-MGISMIEKKLFAERALIILDDVTEFEQLKALCG 305

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
                   S +IITTRD++LL+  +     H++++ E+  N+SL LFS++AF +  P   
Sbjct: 306 NCKWIDRESVLIITTRDLRLLEELKDHHAVHIWKIMEMDENESLELFSKHAFREASPTEN 365

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           + +LS  V+ Y  G+PLAL++LGSYL+  ++EEWES ++KLK++P+  +Q+ L++S+DGL
Sbjct: 366 WNKLSIDVVAYCAGLPLALEILGSYLRWRTKEEWESVLSKLKKIPNYKVQEKLRISFDGL 425

Query: 385 DDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDL 443
            D  E++IFLD  CFF G D+  V   LD C   A IGI  L+  SL+ +  NK+ MH L
Sbjct: 426 RDPMEKDIFLDVCCFFIGKDRTYVTEILDGCGLHASIGIKVLIEHSLIKVEKNKLGMHPL 485

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT------------------- 484
           L++MG EIV + S  +PGKR+RLW  +D+  VL  NT   T                   
Sbjct: 486 LRDMGREIVCESSKNEPGKRNRLWFQKDVLDVLTNNTGTETIQGLAVKLHFTSRDSFEAY 545

Query: 485 ------GINLDSLKELYLGG------------CSN---LKRFPEISCNIED---LDLKET 520
                 G+ L  L  + L G            C     LK  P  + ++E    +D K +
Sbjct: 546 SFEKMKGLRLLQLDHVQLSGNYGYLSKQLKWICWRGFPLKYIPN-NFHLEGVIAIDFKYS 604

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
            +  L  +   L  L  L+L++   L   +     L SL +L L  C  L K+ + IG+L
Sbjct: 605 KLRLLWKTPQVLPWLKFLNLSHSKNLTE-TPDFSKLTSLEKLILRNCPSLCKVHQSIGDL 663

Query: 581 ESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            +L  +NL        +P  + +L  +  L L  C ++  L E
Sbjct: 664 HNLILINLKGCTSLRNLPREVYKLKSVKILILSGCSKIDKLEE 706



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L L    NL   P+ S   ++E L L+   ++ ++  SIG+L  L+ ++L  C+
Sbjct: 616 LPWLKFLNLSHSKNLTETPDFSKLTSLEKLILRNCPSLCKVHQSIGDLHNLILINLKGCT 675

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L+++   +  LKS++ L LSGC K++KL E+I  +ESL  L       +++P S+
Sbjct: 676 SLRNLPREVYKLKSVKILILSGCSKIDKLEEDIVQMESLTTLIADNTAVKQVPFSI 731



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)

Query: 502 LKRFPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
           L + P++   ++ L+L  +  + E P     L+ L  L L NC  L  V   + +L +L 
Sbjct: 609 LWKTPQVLPWLKFLNLSHSKNLTETPD-FSKLTSLEKLILRNCPSLCKVHQSIGDLHNLI 667

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQN 613
            +NL GC  L  LP E+  L+S++ L L+     +K+   + Q+  L+ L   N
Sbjct: 668 LINLKGCTSLRNLPREVYKLKSVKILILSGCSKIDKLEEDIVQMESLTTLIADN 721


>gi|357449987|ref|XP_003595270.1| Heat shock protein [Medicago truncatula]
 gi|355484318|gb|AES65521.1| Heat shock protein [Medicago truncatula]
          Length = 1819

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 263/706 (37%), Positives = 376/706 (53%), Gaps = 90/706 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG D R+NF   L   L +  I TF D++ + +G EI+PSL  AI+ S+I IV
Sbjct: 14  YDVFISFRGIDTRNNFTRDLYDILDQNGIHTFFDEQEIQKGEEITPSLLQAIQQSRIFIV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS  YASS +CLNELV IL+  N + ++++PVFY VDPS        Y  +L       
Sbjct: 74  VFSNNYASSTFCLNELVMILDCSNTHRRLLLPVFYDVDPSQVRHQSGAYGEALKKHEERF 133

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW        SE   I   V +++KK++   P    D  
Sbjct: 134 SDDKDKVQKWRDSLCQAANVSGWHFQHG-SQSEYQFIGNIVEEVTKKINRT-PLHVADNP 191

Query: 162 VGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN-ISSHFEGSYFMQNI 219
           V +ES + E+ S L  GS E  N VGI+G GG+GK+T+A A+Y+N IS  F+G  F+ +I
Sbjct: 192 VALESPVLEVASLLRIGSDEGANMVGIYGTGGVGKSTLARAVYNNQISDQFDGVCFLDDI 251

Query: 220 RDES------------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQI 259
           R+ +                  EK   + N+   ++  +RRL R KVL+V  D+   KQI
Sbjct: 252 RENAINHGLVQLQETLLSEILCEKDIRVGNVSRGISIIKRRLQRKKVLLVLDDVDKAKQI 311

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L G    F  GS++IITTRD  LL  H    + +++EVK+L++  SL LF+ +AF   
Sbjct: 312 QVLAGGHYWFGSGSKIIITTRDKHLLAIHE---ILNLYEVKQLNHEKSLELFNWHAFRNR 368

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                + ++SN  + YA+G+PLAL+V+GS+L G   + W+SA++K +R+ H DI +VLKV
Sbjct: 369 KMDPCYNDISNRAVSYAHGLPLALEVIGSHLFGKRLDVWKSALDKYERILHEDIHEVLKV 428

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-I 438
           SYD LD +++ IFLD ACF+   +       L    FSA+ GI  L  KSL+ I  N  +
Sbjct: 429 SYDDLDKDDKGIFLDIACFYNSYEMGYAKEMLYVHGFSAENGIQVLTDKSLIKIDGNGCV 488

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG----INLDSLKEL 494
            MHDL+Q+MG EIVRQES  +PGKRSRLW  +DI  VL ENT   T     I+L + KE+
Sbjct: 489 RMHDLVQDMGREIVRQESTLEPGKRSRLWSDDDIIHVLEENTGTDTVEVIIIDLYNDKEV 548

Query: 495 YLGGCS-----NLK-------RF----PEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
              G +     NLK       RF     ++  ++  LD    + + LP    N  +L+ L
Sbjct: 549 QWSGTAFENMKNLKILIIRSARFSRGPKKLPNSLGVLDWSGYSSQSLPGDF-NPKKLMML 607

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
            L   S L S  S L   +SL  L+  GC  L +LP  +  L +L  L L +  +   + 
Sbjct: 608 SLHE-SCLISFKS-LKVFESLSFLDFEGCKLLTELP-SLSGLVNLGALCLDDCTNLIAVH 664

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTL 640
            S+  L+KL  L  Q C +L+ L     LP   ++  R C  LK+ 
Sbjct: 665 KSVGFLNKLVLLSTQRCNQLELLVPNINLPSLETLDMRGCLRLKSF 710



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 8/162 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            +SL  L   GC  L   P +S   N+  L L + T +  +  S+G L++LV L    C+
Sbjct: 623 FESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLIAVHKSVGFLNKLVLLSTQRCN 682

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ +   + NL SL  L++ GCL+L+  PE +G +E++ Y+ L +   +K+P S++ L 
Sbjct: 683 QLELLVPNI-NLPSLETLDMRGCLRLKSFPEVLGVMENIRYVYLDQTSIDKLPFSIRNLV 741

Query: 605 KLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSN 642
            L  L L+ C  L  LP+    LP    I A  C   +   +
Sbjct: 742 GLRQLFLRECASLTQLPDSIHILPKLEIITAYGCIGFRLFED 783



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 5/111 (4%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIG 530
           Q  N+   L   INL SL+ L + GC  LK FPE+     NI  + L +T+I++LP SI 
Sbjct: 679 QRCNQLELLVPNINLPSLETLDMRGCLRLKSFPEVLGVMENIRYVYLDQTSIDKLPFSIR 738

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL--KLEKLPEEIGN 579
           NL  L  L L  C+ L  +   +  L  L  +   GC+  +L +  E++G+
Sbjct: 739 NLVGLRQLFLRECASLTQLPDSIHILPKLEIITAYGCIGFRLFEDKEKVGS 789


>gi|224057836|ref|XP_002299348.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222846606|gb|EEE84153.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 208/521 (39%), Positives = 300/521 (57%), Gaps = 64/521 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F  HL  A  +  I TF D +++ RG EIS  L  AI+ SKIS+V
Sbjct: 1   YDVFLSFRGEDNRKTFTDHLYTAFVQAGIHTFRDQNEIPRGEEISKHLHKAIQESKISVV 60

Query: 75  IFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSD-----AGYCPSL------ 122
           +FS+GYASSRWCLNELV+ILESKN K  QIV+P+FY +DPS+       +  +       
Sbjct: 61  VFSKGYASSRWCLNELVEILESKNRKTDQIVLPIFYDIDPSEVRKQTGSFAKAFHRHEEA 120

Query: 123 -------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                              GW  + D+    ES LI+  V D+  KL D    +    LV
Sbjct: 121 FTEKVKEWRKALEEAGNLSGW-NLNDMENGHESKLIQEIVKDVLNKL-DPKHINVATHLV 178

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G++ ++  I   L + + E   VGI G+ GIGKT+IA  +++     FEGS F+ NI + 
Sbjct: 179 GIDPLVLAISDFLSTATDEVCIVGIHGMPGIGKTSIAKVVFNQFCYRFEGSCFLSNINET 238

Query: 223 SEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
           SE+  GL  +                      +   + R+   +VL+V  D+    Q++ 
Sbjct: 239 SEQSNGLVLLQEQLLHDILKQNTVNISNVVRGMVLIKERICHKRVLVVVDDVAHQNQLNA 298

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G    F PGSRVIITT+D  LL      +V   + V+EL  ++SL LFS +AFG   P
Sbjct: 299 LMGERSWFGPGSRVIITTKDEHLL-----LKVDRTYRVEELKRDESLQLFSWHAFGDTKP 353

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           A  ++ELSN V+ Y  G+PLAL+VLGS L G +   W+  ++KL+++P+ +IQK L++S+
Sbjct: 354 AKDYVELSNDVVDYCGGLPLALEVLGSCLPGKNRARWKCLIDKLRKIPNREIQKKLRISF 413

Query: 382 DGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTI-SNNKI 438
           D LDD + QN FLD ACFF G ++  V   L+A C ++ +  +  L  +SL+ + +  KI
Sbjct: 414 DSLDDHQLQNTFLDIACFFIGRNKEYVAKVLEARCGYNPEDDLGTLSERSLIKVDAFGKI 473

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
           +MHDLL++MG +I+ +ES   PGKRSR+W  ED + VLN++
Sbjct: 474 SMHDLLRDMGRDIIHKESPGHPGKRSRIWQREDAWNVLNKH 514


>gi|105922810|gb|ABF81438.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1524

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 260/763 (34%), Positives = 386/763 (50%), Gaps = 150/763 (19%)

Query: 1   MASSS-----SSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNR 54
           MAS+S     SS +  P  K+DVFLSFRGKD R+NF SHL   L +  I+ ++DD+ L R
Sbjct: 97  MASTSVQGITSSSSSPPLYKYDVFLSFRGKDTRNNFTSHLQTNLAQRGIDAYMDDRELER 156

Query: 55  GNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
           G  I P+L  AIE S+ S++IFS  YASS WCL+ELVKI++   + G  V+PVFY VDPS
Sbjct: 157 GKTIEPALWKAIEESRFSVIIFSRDYASSPWCLDELVKIVQGMKEMGHTVLPVFYDVDPS 216

Query: 115 DA----------------------GYCPSL-----GWMGIFDIPTSESVLIEGNVNDISK 147
           +                         C S      GW  I +   SES+ I      IS 
Sbjct: 217 ETYEKAFVEHEQNFKENLEKVQIWKDCLSTVTNLSGW-DIRNRNESESIKIIAEY--ISY 273

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           KLS   P+ +K +LVG++S ++ +   +     E   +GI G+GGIGKTT++  +Y  I 
Sbjct: 274 KLSVTLPTISK-KLVGIDSRVEVLNGYIGEEVGEAIFIGICGMGGIGKTTVSRVLYDRIR 332

Query: 208 SHFEGSYFMQNIRDE-SEKVGG-------LANIHLN----FERRRLSRMKVLIVFY---- 251
             FEGS F+ N+R+  +EK G        L+ I +     ++  R   M    +      
Sbjct: 333 WQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKIL 392

Query: 252 ----DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
               D+ D KQ++ L      F P SR+IIT+RD  +   +  +++   +E ++L+ +D+
Sbjct: 393 LILDDVDDKKQLEFLAAEPGWFGPRSRIIITSRDKNVFTGNDDTKI---YEAEKLNDDDA 449

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LFS+ AF  + PA  F+ELS  V+ YANG+PLAL+V+GS+L G S  EW  A+N++  
Sbjct: 450 LMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIPEWRGAINRMHE 509

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
           +P   I  VL++S+DGL + +Q IFLD ACF KG  +  +   LD+C F+A IGI  L+ 
Sbjct: 510 IPDCKIMDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRILDSCGFNAGIGIPVLIE 569

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDP--------------------------- 460
           +SL+++  +++ MH+LLQ MG EIVR E  K+P                           
Sbjct: 570 RSLISVYGDQVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYEDVSLALMDNTGKEKIEA 629

Query: 461 ------GKRSRLWH-----------------------PEDIYQVLN-------ENTSLPT 484
                 G +   W+                       PED+ + L         + SLP 
Sbjct: 630 IFLDMPGIKEAQWNMKAFSKMSRLRLLKIDNVQLSEGPEDLSKELRFLEWHSYPSKSLPA 689

Query: 485 GINLDSLKELYLG---------GCS--------------NLKRFPEIS--CNIEDLDLKE 519
           G+ +D L EL++          GC               NL + P+++   N+  L L+ 
Sbjct: 690 GLQVDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPNLSSLILEG 749

Query: 520 -TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            T++ E+  S+G    L  ++L NC   + + S L  ++SL+   L GC KLEK P+ +G
Sbjct: 750 CTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKLEKFPDIVG 808

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           N+  L  L L      ++ SS+  L  L  L + NCK L+S+P
Sbjct: 809 NMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKNLESIP 851



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 70/106 (66%), Gaps = 3/106 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GC+ L++FP+I  N+    +L L  T I EL SSI +L  L  L
Sbjct: 780 LPSNLEMESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVL 839

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            + NC  L+S+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE
Sbjct: 840 SMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLE 885



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 5/101 (4%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
             D FLSFRG D  ++F+ HLN AL    I    DDK L +   I   L  AIE S +SI+
Sbjct: 985  QDFFLSFRGADTSNDFI-HLNTALALRVI--IPDDKELEKVMAIRSRLFEAIEESGLSII 1041

Query: 75   IFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
            IF+   AS  WC +ELVKI+   ++     V PV Y V  S
Sbjct: 1042 IFARDCASLPWCFDELVKIVGFMDEMRSDTVFPVSYDVKQS 1082


>gi|227438163|gb|ACP30571.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 234/719 (32%), Positives = 360/719 (50%), Gaps = 117/719 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           HDVF SFRG+DVR +F SH+     R+ I  FID+++ RG  I P L  AI GSKI+I++
Sbjct: 60  HDVFPSFRGEDVRRDFFSHIQREFERKGITPFIDNEIKRGESIGPELIRAIRGSKIAIIL 119

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------A 116
            S  YASS+WCL+ELV+I++ + ++GQ V+ +F+ VDPSD                   A
Sbjct: 120 LSRNYASSKWCLDELVEIMKCREEFGQTVMAIFHKVDPSDVKKLTGDFGKFFKKTCAGKA 179

Query: 117 GYCPSLGWMGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
             C       +  + T          +E+ +I+    D S  L++  PS++ D LVG+ +
Sbjct: 180 KDCIERWRQALAKVATIAGYHSSNWDNEADMIKKIATDTSNMLNNFTPSNDFDGLVGMGA 239

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
             + ++S L  GS E   +GIWG  GIGKTTIA   ++ +S+ F+ S FM +++  S ++
Sbjct: 240 HWENLKSILCLGSDEVRMIGIWGPPGIGKTTIARVAFNQLSNSFQLSVFMDDLKANSSRL 299

Query: 227 GG----------------------LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                                   +   H      RL   KVL+V   +    Q+D +  
Sbjct: 300 CSDDYSVKLQLQQQFMSQITDHKDMVVSHFGVVSNRLRDKKVLVVLDGVNRSVQLDAMAK 359

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
               F PGSR+IITT+D +L + H    + H++EV   + +++L +F    FGQN P  G
Sbjct: 360 ETWWFGPGSRIIITTQDQKLFRAHG---INHIYEVNLPTNDEALQIFCTYCFGQNFPKYG 416

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F EL+  V   +  +PL L+V+GSYL+GMS+E+W +++ +L+     DIQ +LK SYD L
Sbjct: 417 FEELAREVTSLSGELPLGLRVMGSYLRGMSKEDWTNSLPRLRDSLDTDIQSILKFSYDAL 476

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DDE++++FL  ACFF     + +   L       +  +  L  KSL++I + +I MH LL
Sbjct: 477 DDEDKDLFLHIACFFSSEQIHKMEEHLAKRFLYVRQRLKVLAEKSLISIDSGRIRMHSLL 536

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGI------------------ 486
           +++G EIV ++SI +PG+R  L+   DI +VL    +    +                  
Sbjct: 537 EKLGREIVCKQSIHEPGQRQFLYDKRDICEVLTGGATGSKSVIGIKFEYYRIREEIDISE 596

Query: 487 -------NLDSLKEL--------------------YLGGCSNLKRFPEISC-NIEDLDLK 518
                  NL  LK                      Y+G  +NL+     +C N+ +L L 
Sbjct: 597 KAFEGMSNLQFLKVCGFTDALQITGVSQICXSSXSYVGNATNLEYLDLRNCLNMVELPLS 656

Query: 519 E--------------TAIEELPSSIGNLSRLVDLDLTNCSGLK-SVSSRLCNLKSLRRLN 563
                          + +E LP++I NL  L +LD+  CS L     S + N  +LR LN
Sbjct: 657 LRNLKKLKRLRLKGCSKLEVLPTNI-NLEYLNELDIAGCSSLDLGDFSTIGNAVNLRELN 715

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +S   +L ++P  IGN  +LE L L+      ++P  +  L KL  LRL+ C RL+ LP
Sbjct: 716 ISSLPQLLEVPSFIGNATNLENLVLSSCSKLVELPLFIGNLQKLRWLRLEGCIRLEVLP 774



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 25/165 (15%)

Query: 482 LPTGINLDSLKELYLGGCS--NLKRFPEI--SCNIEDLDLKE-TAIEELPSSIGNLSRLV 536
           LPT INL+ L EL + GCS  +L  F  I  + N+ +L++     + E+PS IGN + L 
Sbjct: 677 LPTNINLEYLNELDIAGCSSLDLGDFSTIGNAVNLRELNISSLPQLLEVPSFIGNATNLE 736

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL---------------- 580
           +L L++CS L  +   + NL+ LR L L GC++LE LP  I                   
Sbjct: 737 NLVLSSCSKLVELPLFIGNLQKLRWLRLEGCIRLEVLPTNINLESLLELNLSDCSMLKSF 796

Query: 581 ----ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                +LE LNL     E++P S++    L +L +   + L+  P
Sbjct: 797 PQISTNLEKLNLRGTAIEQVPPSIRSWPHLKELHMSYFENLKEFP 841



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 34/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT INL+SL EL L  CS LK FP+IS N+E L+L+ TAIE++P SI +   L +L ++
Sbjct: 773 LPTNINLESLLELNLSDCSMLKSFPQISTNLEKLNLRGTAIEQVPPSIRSWPHLKELHMS 832

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                                        E L E    LE +  L+L + + +++P  +K
Sbjct: 833 ---------------------------YFENLKEFPHALERITSLSLTDTEIQEVPPLVK 865

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGS-SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
           Q+S+L+   L  C++L  LP +   + SI+A  C SL+ L  S +   R         F+
Sbjct: 866 QISRLNRFFLSGCRKLVRLPPISESTHSIYANDCDSLEILECSFSDQIRR------LTFA 919

Query: 661 NC 662
           NC
Sbjct: 920 NC 921


>gi|336238977|gb|AEI27415.1| TIR_2 [Helianthus annuus]
          Length = 1055

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 253/734 (34%), Positives = 381/734 (51%), Gaps = 133/734 (18%)

Query: 13  HP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           HP KH+VFLSFRG+D R NFV HL   L ++ I+T+ DD+ L RG  I  +L  AI+ S+
Sbjct: 74  HPLKHEVFLSFRGEDTRRNFVDHLYKDLVQKGIQTYKDDETLPRGERIGRALLKAIQESR 133

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL--- 122
           I++V+FS+ YA S WCL+EL  I+E  +  GQI++P+FY V+PSD       Y  +    
Sbjct: 134 IAVVVFSQNYADSSWCLDELAHIMECVDTRGQILIPIFYYVEPSDVRKQNGKYGKAFSKH 193

Query: 123 ----------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                                 GW  + D  + E+  I   V  IS +LS L  +DNKD 
Sbjct: 194 ERKNKQKVESWRNALEKAGNLSGW--VIDENSHEAQCISDIVGTISSRLSSLNTNDNKD- 250

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           L+G+E+ +++++  L  GS     VGIWG+GG GKTT+ASA Y  IS  FE    ++NIR
Sbjct: 251 LIGMETRLRDLKLMLEIGSGGVRMVGIWGVGGGGKTTLASAAYMEISHLFEACCLLENIR 310

Query: 221 DESEKVG------GLANIHL-------------NFERRRLSRMKVLIVFYDLTDLKQIDL 261
           +ES K G       + ++ L             +  +RRL   +VL+V  D+ +L+Q++ 
Sbjct: 311 EESSKHGLKKLQEKILSVALKTTVVVDSEIEGRSMIKRRLCHKRVLVVLDDVDELEQLEA 370

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  D F  GSR+IITTRD  LL +   +   +++EV  LSY +++ LF+R+A+ ++ P
Sbjct: 371 LAGSHDWFGEGSRIIITTRDKHLLSSRAHT---NIYEVSLLSYYEAIKLFNRHAYYKDKP 427

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              + +LS  V+ YA G+PLAL+VLGS+L    ++EW+S + KLK +P   + + LK+SY
Sbjct: 428 IEDYEKLSLRVVSYAGGLPLALKVLGSFLYDKDKDEWKSTLAKLKCIPEEKVMERLKISY 487

Query: 382 DGLDDEEQNIFLDTACFFKGN---DQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           DGL+  ++++FLD ACF + N   +    M  LDAC F   IG+  L  KSL+ +S    
Sbjct: 488 DGLEPYQKDLFLDIACFMRHNYSLEMDEAMMVLDACNFYPVIGLKVLEQKSLIKVSKYGF 547

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN--LDSLKELY- 495
            MHDL++EM   IVR E   +  K SR+W  ED+  + +   + P+  N  L S    Y 
Sbjct: 548 EMHDLIEEMAHYIVRGEHPNNLEKHSRIWRWEDLRYLCDMGAAAPSMENEVLASFAMYYR 607

Query: 496 ---------LGGCSNLK----------RFP------EISC-------------------N 511
                    +    NL+           FP      ++ C                   N
Sbjct: 608 SSHPGLSDVVANMKNLRWIKWDWYPASSFPSNFQPTKLRCLMLRSSWQETLWEGCKSLPN 667

Query: 512 IEDLDLKETA-------IEELP-----------------SSIGNLSRLVDLDLTNCSGLK 547
           ++ LDL+E+         E LP                  SIG   RLV ++LT+C+ LK
Sbjct: 668 LKILDLRESKSLITTPDFEGLPCLERLILWGCESLEEIHPSIGYHKRLVFVNLTSCTALK 727

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL-SKL 606
                + ++K L  L L GC + ++ P+   N++SL  L+L+    E IP S+ +  + L
Sbjct: 728 RFPP-IIHMKKLETLILDGCRRPQQFPDIQSNMDSLVTLDLSRTGIEIIPPSIGRFCTNL 786

Query: 607 SDLRLQNCKRLQSL 620
               L +C RL+ +
Sbjct: 787 VSFNLSDCPRLKRI 800



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 42/219 (19%)

Query: 467 WHPEDIYQVLNENTSL---PTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKET 520
           +H   ++  L   T+L   P  I++  L+ L L GC   ++FP+I  N++ L   DL  T
Sbjct: 711 YHKRLVFVNLTSCTALKRFPPIIHMKKLETLILDGCRRPQQFPDIQSNMDSLVTLDLSRT 770

Query: 521 AIEELPSSIGNL-SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE-------- 571
            IE +P SIG   + LV  +L++C  LK +      LKSL+ LNL GC+ L+        
Sbjct: 771 GIEIIPPSIGRFCTNLVSFNLSDCPRLKRIEGNFHLLKSLKDLNLYGCIGLQSFHHDGYV 830

Query: 572 -----KLPEEIGNLESLEYLNLAEKD--------------------FEKIPSSMKQLSKL 606
                + P  +  L +L +  L + D                    F ++PS + QL  L
Sbjct: 831 SLKRPQFPRFLRKL-NLSWCKLGDGDILSDICELLNLQLLDLSGNNFSRLPSRISQLPCL 889

Query: 607 SDLRLQNCKRLQSLPELPCGSS-IHARHCTSLKTLSNSS 644
             L L  C RL  LP+LP   + ++   C SL+ + + S
Sbjct: 890 KYLNLTCCARLAELPDLPSSIALLYVDGCDSLEIVRDLS 928


>gi|359493267|ref|XP_002271591.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1417

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 253/677 (37%), Positives = 362/677 (53%), Gaps = 110/677 (16%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETF-IDDKLNRGNEISPS 61
           +SSSS ++ P   ++VFLSFRG+D  H+F  HL AAL +  I TF +DD  ++G EI   
Sbjct: 207 ASSSSTSIGPW-DYEVFLSFRGQDTSHSFTDHLYAALYQNGIRTFRLDD--HKGEEIESC 263

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS 121
              AIE ++  +VI SE YA SR CL ELVK +E KN+ G++V+P+FY V+PS       
Sbjct: 264 TFKAIEKARCILVILSEHYAHSRGCLRELVKFIECKNQNGKLVIPIFYHVEPS------- 316

Query: 122 LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE 181
                                             D + Q        ++ E  +  G   
Sbjct: 317 ----------------------------------DVRKQKGTYGKAFQDHEWPIFLGG-- 340

Query: 182 FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE----------------- 224
              VGI+G+GGIGKTTIA   +++I+S F  + F+ N+R+ S+                 
Sbjct: 341 MYRVGIYGLGGIGKTTIAKVSFNHIASDFMITSFIANVRECSKSKGLLHLQKQLLRDCSM 400

Query: 225 -KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRD 281
            +V  L+N+   +   + RL   KVL+V  D+ +L Q++ L G  + F PGS +IITTR+
Sbjct: 401 RRVESLSNVDEGITMIKARLCFKKVLLVLDDVDNLSQLEALAGDHNWFGPGSIIIITTRE 460

Query: 282 VQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPL 341
             LL    G  +  ++E K+L + +++ LFS +AF QNHP   +  LSN V++Y +G+PL
Sbjct: 461 KHLL----GHEMDALYEAKKLGHKEAVELFSWHAFNQNHPKEYYETLSNSVVRYVDGLPL 516

Query: 342 ALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKG 401
            L+VLG +L G +  EWES ++KLK+ P+ +IQ VLK SYD LD  ++ +FLD ACFF G
Sbjct: 517 GLKVLGRFLCGKTVGEWESELHKLKQEPNQEIQSVLKRSYDELDHTQKQLFLDVACFFNG 576

Query: 402 NDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPG 461
            D+  V   LDAC F AK GI  L  K LVTI +NKI MHDLLQ+MG +IVRQES +DPG
Sbjct: 577 EDKDFVTRILDACNFYAKGGIRVLTDKCLVTILDNKIWMHDLLQQMGRDIVRQESPEDPG 636

Query: 462 KRSRLWHPEDIYQVLNE------------NTSLPTGINLDS-----LKELYLGGC-SNLK 503
           K SRL +P  I +VL              N S+P  I++ +     +K L L    S+LK
Sbjct: 637 KWSRLCYPGVISRVLTRKMGTEAIKGMLFNVSIPKQIHITTKSFAMMKNLRLLKIYSHLK 696

Query: 504 ----------------RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
                            FP  SC +  L  +   +E LPSS  +   LV+LD+   S LK
Sbjct: 697 STSAREDNSVKLSKDFEFP--SCELRYLYWQGYPLESLPSSF-DAEDLVELDM-RYSNLK 752

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKL 606
            +      L+ L  + LS    L ++P+   +  +LE L L       ++ +S+ +LSKL
Sbjct: 753 QLWENDMLLEKLNTIRLSCSQHLIEIPDISISAPNLETLILDGCSSLLEVHTSIGKLSKL 812

Query: 607 SDLRLQNCKRLQSLPEL 623
             L L+NCK+L S P +
Sbjct: 813 ILLSLKNCKKLSSFPSI 829



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 103/164 (62%), Gaps = 10/164 (6%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           +S P+ IN+++LK L L GCS LK+FP+I  N+E   +L L  TAIEELP S G+L+ LV
Sbjct: 824 SSFPSIINMEALKILNLSGCSGLKKFPDIQGNMEHLLELYLASTAIEELPLSFGHLTGLV 883

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            LDL  C  LKS+ + +C L+SL  L LSGC KLE  PE + ++E+L+ L L     E +
Sbjct: 884 ILDLKRCKNLKSLPASICKLESLEYLFLSGCSKLENFPEMMEDMENLKELLLDGTSIEGL 943

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
           P S+ +L  L  L L+NCK L SLP+  C         TSL+TL
Sbjct: 944 PLSIDRLKGLVLLNLRNCKNLVSLPKGMC-------KLTSLETL 980



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 70/98 (71%), Gaps = 1/98 (1%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIVI 75
           DVFLSFRG+D RH F  HL  AL R+ I TF D ++L RG EI+P L  AIE S+I ++I
Sbjct: 24  DVFLSFRGEDTRHTFTDHLYRALNRKGIRTFRDTEELRRGEEIAPELLKAIEESRICLII 83

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP 113
            SE YA SRWCL EL KI++ + + G++V P+FY VDP
Sbjct: 84  LSENYARSRWCLEELAKIMDCRKQMGKLVFPIFYHVDP 121



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 4/133 (3%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLP  I  L+SL+ L+L GCS L+ FPE+  ++E+L    L  T+IE LP SI  L  LV
Sbjct: 895  SLPASICKLESLEYLFLSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPLSIDRLKGLV 954

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L+L NC  L S+   +C L SL  L +SGC  L  LP  +G+L+ L  L+       + 
Sbjct: 955  LLNLRNCKNLVSLPKGMCKLTSLETLIVSGCSLLNNLPRNLGSLQRLVQLHAEGTAITQP 1014

Query: 597  PSSMKQLSKLSDL 609
            P S+  L  L  L
Sbjct: 1015 PDSIVLLRNLEVL 1027



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 34/213 (15%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEE----------- 524
             SLP G+  L SL+ L + GCS L   P    +++    L  + TAI +           
Sbjct: 965  VSLPKGMCKLTSLETLIVSGCSLLNNLPRNLGSLQRLVQLHAEGTAITQPPDSIVLLRNL 1024

Query: 525  -----------LPSSIGNLSRLVDLDLTNCSGLK-SVSSRLCNLKSLRRLNLSGCLKLE- 571
                        P+S+G+L     L   + +G+   + S     +S   L+LS C  +E 
Sbjct: 1025 EVLVYPGRKILTPTSLGSLFSFWLLHRNSSNGIGLHLPSGFPIFRSFTNLDLSDCKLIEG 1084

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
             +P +I +L SL+ L L++ +F  IP+ + +L+ L DL +  C+ L  +PELP     I 
Sbjct: 1085 AIPNDICSLISLKKLALSKNNFLSIPAGISELTNLKDLLIGQCQSLIEIPELPPSIRDID 1144

Query: 631  ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
            A +CT+L  L  SS++ T        F F NCS
Sbjct: 1145 AHNCTAL--LPGSSSVSTLQGLQ---FLFYNCS 1172



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 73/172 (42%), Gaps = 28/172 (16%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE----ELPSSIGNLSRLV 536
           SLP+  + + L EL +   SNLK+  E    +E L+    +      E+P    +   L 
Sbjct: 731 SLPSSFDAEDLVELDMR-YSNLKQLWENDMLLEKLNTIRLSCSQHLIEIPDISISAPNLE 789

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK-----------------------LEKL 573
            L L  CS L  V + +  L  L  L+L  C K                       L+K 
Sbjct: 790 TLILDGCSSLLEVHTSIGKLSKLILLSLKNCKKLSSFPSIINMEALKILNLSGCSGLKKF 849

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           P+  GN+E L  L LA    E++P S   L+ L  L L+ CK L+SLP   C
Sbjct: 850 PDIQGNMEHLLELYLASTAIEELPLSFGHLTGLVILDLKRCKNLKSLPASIC 901


>gi|3947735|emb|CAA08798.1| NL27 [Solanum tuberosum]
          Length = 821

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 247/695 (35%), Positives = 362/695 (52%), Gaps = 115/695 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG D R  F SHL   L    I TF DDK L  G+ I   L  AIE S++++
Sbjct: 19  KYDVFLSFRGVDTRRTFTSHLYEGLKNRGIFTFQDDKRLENGDSIPEELLKAIEESQVAL 78

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           +IFS+ YA+SRWCLNELVKI+E K + GQIV+P+FY VDPS+                  
Sbjct: 79  IIFSKNYATSRWCLNELVKIMECKEEKGQIVIPIFYDVDPSEVRKQTKSFAEAFTEHESK 138

Query: 117 ------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ---------- 160
                 G     GW        S++  ++G   DIS ++   +     D           
Sbjct: 139 YANDIEGMQKVKGWRTAL----SDAADLKGY--DISNRIESDYIQHIVDHISVLCKGSLS 192

Query: 161 ----LVGVESIIKEIESQL----LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
               LVG+++  K I S L    +SG      VGIWG+ G+GKTTIA AI+  +S  FE 
Sbjct: 193 YIKNLVGIDTHFKNIRSLLAELQMSGVL---IVGIWGMPGVGKTTIARAIFDRLSYQFEA 249

Query: 213 SYFMQNIRDESEKVGGLANIHLN------------------FERRRLSRMKVLIVFYDLT 254
             F+ +I++    +  L NI L+                      RL   KVL+V  D+ 
Sbjct: 250 VCFLADIKENKCGMHSLQNILLSELLKEKDNCVNNKEDGRSLLAHRLRFKKVLVVLDDID 309

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
            + Q+D L G LD F  GSR+I TTRD  L+    G  V  V+E+  L  +D++ LF R 
Sbjct: 310 HIDQLDYLAGNLDWFGNGSRIIATTRDKHLI----GKNV--VYELPTLHDHDAIKLFERY 363

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF +      F EL+  V+ +A G+PLAL+V G +       EW SA+ ++K  P+ +I 
Sbjct: 364 AFKEQVSDKCFKELTLEVVSHAKGLPLALKVFGCFFHERDITEWRSAIKQIKNNPNSEIV 423

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
           + LK+SYDGL+  +Q+IFLD ACF +G  +  VM  L++C F A IG+S L+ KSLV+IS
Sbjct: 424 EKLKISYDGLETIQQSIFLDIACFLRGRRKDYVMQILESCDFGADIGLSVLIDKSLVSIS 483

Query: 435 -NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKE 493
            NN I MHDL+Q+MG  +V+++  KDPG+RSRLW  +D  +V+  NT         +++ 
Sbjct: 484 GNNTIEMHDLIQDMGKYVVKKQ--KDPGERSRLWLTKDFEEVMINNTGTK------AVEA 535

Query: 494 LYLGGCSNLKRFPE----------ISCNIEDLDLKETAIEELPSSIGNL----------- 532
           +++    N  RF +          I C I D +  + +IE LP+S+              
Sbjct: 536 IWVPNF-NRPRFSKEAMTIMQRLRILC-IHDSNCLDGSIEYLPNSLRWFVWNNYPCESLP 593

Query: 533 -----SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
                 +LV LDL+  S L  + +   +L  L++L+L     L + P +   + +L+YL+
Sbjct: 594 ENFEPQKLVHLDLS-LSSLHHLWTGKKHLPFLQKLDLRDSRSLMQTP-DFTWMPNLKYLD 651

Query: 588 LAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L+  ++  ++  S+    +L +L L NC RL+  P
Sbjct: 652 LSYCRNLSEVHHSLGYSRELIELNLYNCGRLKRFP 686



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 9/159 (5%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNC 543
           +L  L++L L    +L + P+ +   N++ LDL     + E+  S+G    L++L+L NC
Sbjct: 620 HLPFLQKLDLRDSRSLMQTPDFTWMPNLKYLDLSYCRNLSEVHHSLGYSRELIELNLYNC 679

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ- 602
             LK       N++SL  ++L  C  LEK P   G ++    + +     +++PSS+   
Sbjct: 680 GRLKRFPC--VNVESLDYMDLEFCSSLEKFPIIFGTMKPELKIKMGLSGIKELPSSVTYQ 737

Query: 603 ---LSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLK 638
              ++K    R ++   L+SL ++   +     HC  +K
Sbjct: 738 THIINKFGFRRYKDEPELESLLQMRENNDEPIEHCIGIK 776


>gi|359495285|ref|XP_002276740.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1557

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 215/518 (41%), Positives = 297/518 (57%), Gaps = 62/518 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +++VFLSFRG+D R NF  HL AAL ++   TF  D + RG  I P+   AIE S+  +V
Sbjct: 222 EYEVFLSFRGQDTRQNFTDHLYAALYQKGFRTFRVDYI-RGEMILPTTLRAIEMSRCFLV 280

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSL------- 122
           I S+ YA S+WCL+EL +I+ES+ + G+IV PVFY V+PSD       Y  +L       
Sbjct: 281 ILSKNYAHSKWCLDELKEIMESRRQMGKIVFPVFYHVNPSDVRNQGESYGEALANHERKI 340

Query: 123 -------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                              GW        SE+  IE     I  K S      +K+ L+G
Sbjct: 341 PLEYTQKLRAALREVGNLSGWH--IQNGKSEADFIEDITCVILMKFSQKLLQVDKN-LIG 397

Query: 164 VESIIKEIES---QLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           ++  ++E+E    Q++   S +   VGI+G GGIGKTT+A  +Y+ I + F  + F+ N+
Sbjct: 398 MDYRLEEMEEIFPQIIDPLSNDVRMVGIYGFGGIGKTTMAKVLYNRIGAQFMIASFIANV 457

Query: 220 RDESEKVGGL----ANIHLNFERR----------------RLSRMKVLIVFYDLTDLKQI 259
           R++S+  G L      +H    RR                RL   KVL+V  D+ DL Q+
Sbjct: 458 REDSKSRGLLYLQKQLLHDILPRRKNFIRNVDEGVHMIKDRLCFKKVLLVLDDVDDLNQL 517

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G    F PGSR+I+TTRD  LL+ H    +  ++E K+L + +++ LF  NAF QN
Sbjct: 518 EALAGDHSWFGPGSRIIVTTRDKHLLELHG---MDALYEAKKLDHKEAIELFCWNAFKQN 574

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           HP   +  LSN V+ Y NG+PL L++LG +L G +  +WES + KL+R P+ +IQ+VLK 
Sbjct: 575 HPKEDYETLSNSVVHYVNGLPLGLKILGCFLYGKTVRQWESELQKLQREPNQEIQRVLKR 634

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           SYD LDD +Q IFLD ACFF G ++  V   LDAC F A+ GI  L  K  VTI +NKI 
Sbjct: 635 SYDELDDTQQQIFLDIACFFNGEEKDFVTRILDACNFYAESGIGVLGDKCFVTILDNKIW 694

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
           MHDLLQ+MG EIVRQE  +DPGK SRL +PE + +VL 
Sbjct: 695 MHDLLQQMGREIVRQECPRDPGKWSRLCYPEVVNRVLT 732



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 73/102 (71%), Gaps = 1/102 (0%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF G+D RHNF  HL  AL ++ I TF DD+ L RG EI+  L  AIE S+I +V
Sbjct: 25  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDDEELRRGEEIAAELLKAIEESRICVV 84

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           I S+ YA SRWCL+ELVKI+E K   GQ+V P+FY VDPS+ 
Sbjct: 85  ILSKNYARSRWCLDELVKIMEWKQCMGQLVFPIFYQVDPSNV 126



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 3/142 (2%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
             P+ I++ +L+ L   GCS LK+FP I  N+E   +L L  TAIEELPSSIG+L+ LV L
Sbjct: 906  FPSIIDMKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLL 965

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            DL  C  LKS+ + +C LKSL  L+LSGC +LE  PE   N+++L+ L L     E +PS
Sbjct: 966  DLKWCKNLKSLPTSICKLKSLENLSLSGCSQLESFPEVTENMDNLKELLLDGTPIEVLPS 1025

Query: 599  SMKQLSKLSDLRLQNCKRLQSL 620
            S+++L  L  L L+ CK L SL
Sbjct: 1026 SIERLKGLVLLNLRKCKNLLSL 1047



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/201 (40%), Positives = 110/201 (54%), Gaps = 23/201 (11%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLPT I  L SL+ L L GCS L+ FPE++ N+++L    L  T IE LPSSI  L  LV
Sbjct: 975  SLPTSICKLKSLENLSLSGCSQLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLV 1034

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLR------------RLNLSGCLKLE-KLPEEIGNLESL 583
             L+L  C  L S+S+ + N   LR             L++S C  +E  +P  I +L SL
Sbjct: 1035 LLNLRKCKNLLSLSNGISNGIGLRLPSSFSSFRSLSNLDISDCKLIEGAIPNGICSLISL 1094

Query: 584  EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
            + L+L+  +F  IP+ + +L+ L DLRL  C+ L  +PELP     I A +CTSL  L  
Sbjct: 1095 KKLDLSRNNFLSIPAGISELTNLKDLRLAQCQSLTGIPELPPSVRDIDAHNCTSL--LPG 1152

Query: 643  SSTLLTRSSKHWDIFNFSNCS 663
            SS++ T        F F NCS
Sbjct: 1153 SSSVSTLQGLQ---FLFYNCS 1170



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 5/142 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC---NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           L+ L  + +    +L   P+I+    N+E L L   +++ E+  SIG L++L+ L+L NC
Sbjct: 841 LEKLNTIRVSCSQHLIEIPDITVSAPNLEKLILDGCSSLLEVHPSIGKLNKLILLNLKNC 900

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L    S + ++K+L  LN SGC  L+K P   GN+E+L  L LA    E++PSS+  L
Sbjct: 901 KKLICFPS-IIDMKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHL 959

Query: 604 SKLSDLRLQNCKRLQSLPELPC 625
           + L  L L+ CK L+SLP   C
Sbjct: 960 TGLVLLDLKWCKNLKSLPTSIC 981



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query: 66   IEGSKISIVIFSEGYASSRWCLNELVKILE 95
            +E SK S++I SE YASSRWCL ELVKILE
Sbjct: 1490 VENSKFSVIILSENYASSRWCLEELVKILE 1519


>gi|359493556|ref|XP_003634626.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1148

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 261/693 (37%), Positives = 357/693 (51%), Gaps = 86/693 (12%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSS 64
           SSS   +    HDVFLSFRG+D R+ F  HL AAL  + I TF DDKL RG EI+P L  
Sbjct: 9   SSSSTSVLRWNHDVFLSFRGEDTRYKFTDHLYAALVNKGIRTFRDDKLKRGEEIAPLLLK 68

Query: 65  AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYC 119
            IE S++SIV+FSE YASSRWCL+ELVKI+E + K  QI+VP+FY VDPSD       + 
Sbjct: 69  VIEESRLSIVVFSENYASSRWCLDELVKIMECRQKIRQILVPIFYHVDPSDLRTQKGSFE 128

Query: 120 PSL------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIES 173
            S       G      I    + L E + N     L +   + +  QLVG++S  +EI  
Sbjct: 129 KSFASHERHGRDSKEKIQRWRAALTEAS-NLSGWHLFEGLKAISYGQLVGMDSRAREISL 187

Query: 174 QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGL---- 229
           +L     +   +GI GIGGIGKTTIA  IY+     FE + F++NI + S+  G L    
Sbjct: 188 RLDLELDDVRIIGICGIGGIGKTTIAKVIYNQFFYQFEHTSFLENISEISKNQGLLHLQN 247

Query: 230 ----------ANIHL-------NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPG 272
                      NI++       N  +  L   +V IV  D+ D  Q++ L+G  D    G
Sbjct: 248 QLLCNILEVEENIYISAIGQGSNMIKNILRSKRVFIVLDDVDDSNQLESLVGNHDWLGNG 307

Query: 273 SRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIV 332
           SRVIITTR+  LL      RV  ++EV++L + D   LF+ +AF QN P   F+ LS   
Sbjct: 308 SRVIITTRNKHLLT---VQRVDELYEVEKLKFEDGYELFNWHAFRQNIPKQDFINLSYDA 364

Query: 333 IKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIF 392
           + Y  G+PLAL++LGS L   +  +W+S + KLKR P   I  +LK S+ GLD  +++IF
Sbjct: 365 VCYCQGLPLALKILGSLLIDKTRPQWKSELKKLKREPDKKIHNILKRSFHGLDHTQKDIF 424

Query: 393 LDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIV 452
           LD AC FKG  +  V   LD C F  + G+  L  K L+TI NN I MHDL+Q+MG EI+
Sbjct: 425 LDIACCFKGKKRNFVSRILDGCNFYVERGLKDLSDKCLITILNNWINMHDLIQQMGWEII 484

Query: 453 RQESIKDPGKRSRLWHPEDIYQV----------------------LNENTSLPTGINLDS 490
           R +   +P K SRLW PEDI +                       +  NT + + +N   
Sbjct: 485 RGKFPNEPSKWSRLWDPEDIERAFATSEAMKKMEAVFLDLSRLKQMQFNTKVLSKMNKLR 544

Query: 491 LKELY-------------LGGCSNLK-------RFPEISCNIEDLDLKETAIEELPSSIG 530
           L ++Y             L    N K        FP  S  +  L  +  +++ LPS+  
Sbjct: 545 LLKVYWRRHYGHVRKDYKLTLPENFKLILPENFEFP--SYELRYLYWERYSLKSLPSNFK 602

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--EEIGNLESLEYLNL 588
               LV + L N +  +      C L  L+ L+LS   +L +LP    I NLE L   N 
Sbjct: 603 G-ENLVKIKLPNSNIRQLWQGNKC-LGKLKVLDLSDSKQLIELPNFSNISNLEKLILHNC 660

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             +  +KI SS++ L  L+ L L  CK+L SLP
Sbjct: 661 --RSLDKIDSSIEVLKNLNVLDLSWCKKLTSLP 691



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 6/174 (3%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
           +L SL+ LYL GCSNL+ FPEI+    ++E L L ETAI+ELP +I +L +L  L +  C
Sbjct: 768 SLKSLQLLYLQGCSNLETFPEITEDMASLELLSLSETAIKELPPTIQHLKQLRLLFVGGC 827

Query: 544 SGLKSVSSRLCNLK-SLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           S L+     L +LK SL  L+LS    ++  +P EI  L  LE LNL   +F  IP+++ 
Sbjct: 828 SRLEKFPKILESLKDSLINLDLSNRNLMDGAIPNEIWCLSLLEILNLRRNNFRHIPAAIT 887

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHW 654
           QL KL+ L++ +CK LQ  PE+P     I A  CTSL+TLS+ S+ L  S   W
Sbjct: 888 QLRKLTLLKISHCKMLQGFPEVPLSLKHIEAHDCTSLETLSSPSSKLWSSLLQW 941



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/149 (38%), Positives = 96/149 (64%), Gaps = 5/149 (3%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETAIEELPSSIGNLSR 534
           TSLP+G+  LDSL+ L L GCSNL++FP+I  +    ++++ L  T I+ELP SI +L+ 
Sbjct: 688 TSLPSGMQYLDSLEILNLNGCSNLEKFPKIRWSFRKGLKEIRLDGTPIKELPFSIDDLTL 747

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           +  L + +C  ++S+ S + +LKSL+ L L GC  LE  PE   ++ SLE L+L+E   +
Sbjct: 748 VKILSMGDCKNVRSLLSSIGSLKSLQLLYLQGCSNLETFPEITEDMASLELLSLSETAIK 807

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           ++P +++ L +L  L +  C RL+  P++
Sbjct: 808 ELPPTIQHLKQLRLLFVGGCSRLEKFPKI 836



 Score = 46.6 bits (109), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 8/102 (7%)

Query: 515 LDLKET-AIEELP--SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           LDL ++  + ELP  S+I NL +L+   L NC  L  + S +  LK+L  L+LS C KL 
Sbjct: 632 LDLSDSKQLIELPNFSNISNLEKLI---LHNCRSLDKIDSSIEVLKNLNVLDLSWCKKLT 688

Query: 572 KLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSK-LSDLRL 611
            LP  +  L+SLE LNL    + EK P       K L ++RL
Sbjct: 689 SLPSGMQYLDSLEILNLNGCSNLEKFPKIRWSFRKGLKEIRL 730


>gi|224136171|ref|XP_002327398.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222835768|gb|EEE74203.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 722

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 249/694 (35%), Positives = 369/694 (53%), Gaps = 83/694 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           M  ++SS    P  K+DVFLSFRGKD R+NF SHL + L +  I+ ++DD  L RG  I 
Sbjct: 6   MQKAASSSYSPPQWKYDVFLSFRGKDTRNNFTSHLYSNLEQRGIDVYMDDSGLERGKTIE 65

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P+L  AIE S+ SIV+FS  YASS WCL+ELVKI++   + G  V+PVFY VDPS     
Sbjct: 66  PALWQAIEDSRFSIVVFSRDYASSSWCLDELVKIVQCMKEMGHTVLPVFYDVDPSEVADQ 125

Query: 115 -------------------DAGYCPS-----LGWMGIFDIPTS-ESVLIEGNVNDISKKL 149
                              D   C S     +  +  +D+  S ES  I+  V  I  KL
Sbjct: 126 TGDYKKAFIEHKEKHSGNLDKVKCWSDCLSTVANLSGWDVRNSDESQSIKKIVEYIQCKL 185

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
           S   P+ +K+ LVG++S +K +   +     +   +GI G+GG+GKTT+A  +Y  I   
Sbjct: 186 SFTLPTISKN-LVGMDSRLKVLNEYIDEQVNDTLFIGICGMGGMGKTTVARVLYDRIRWQ 244

Query: 210 FEGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVLIV 249
           F GS F+ N+R+   +  GL  +                     ++  +RRL   KVL++
Sbjct: 245 FGGSCFLANVREVFAEKDGLCRLQEQLLSEISMELPTARDSSRRIDLIKRRLRLKKVLLI 304

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ D +Q+ +L      F PGSR+IIT+R+  +L +H  +R+   +E ++L+  D+L 
Sbjct: 305 LDDVDDEEQLQMLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRI---YEAEKLNDKDALL 361

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS  AF ++ PA    ELS  V+ YANG+PLAL+V+GS+L      EW+SA+N++  +P
Sbjct: 362 LFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAINRMNDIP 421

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              I  VL++S+DGL + E+ IFLD ACF KG  +  +   LD+C F A IG+  L+ KS
Sbjct: 422 DRKIIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQVLIEKS 481

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD 489
           L+ +S ++I MH+LLQ+MG EIVR ES ++PG+RSRL   +D+   L ++T     I LD
Sbjct: 482 LIRVSRDEIWMHNLLQKMGEEIVRCESPEEPGRRSRLHTYKDVSDALKDSTGKIESIFLD 541

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR--------------- 534
             K        N+  F +++  +  L +    + E P  + N  R               
Sbjct: 542 LPKA--KEATWNMTAFSKMT-KLRLLKIHNVDLSEGPEYLSNELRFLEWHAYPSKSLPAC 598

Query: 535 -----LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLN 587
                LV+L ++ CS ++ +      L +L+ +NLS  L L   P+  G  NLESL    
Sbjct: 599 FRPDELVELYMS-CSRIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEG 657

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            A     ++  S  +  KL  + L NC  L+ LP
Sbjct: 658 CAS--LSEVHPSFGRHKKLQLVNLVNCYSLRILP 689


>gi|351723127|ref|NP_001236756.1| candidate disease-resistance protein SR1 [Glycine max]
 gi|37780302|gb|AAO92748.1| candidate disease-resistance protein SR1 [Glycine max]
          Length = 1137

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 254/724 (35%), Positives = 371/724 (51%), Gaps = 119/724 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+++ S+  I    +DVFLSF G+D RH F  +L  AL    I TFIDD+ L RG+EI 
Sbjct: 1   MAATTRSLASI----YDVFLSFTGQDTRHGFTGYLYKALDDRGIYTFIDDQELPRGDEIK 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
           P+LS AI+GS+I+I + S+ YA S +CL+ELV IL  K++ G +V+PVFY VDPS   + 
Sbjct: 57  PALSDAIQGSRIAITVLSQNYAFSTFCLDELVTILHCKSE-GLLVIPVFYKVDPSHVRHQ 115

Query: 119 -------------------------------CPSLGWMGIFDIPTSESVLIEGNVNDISK 147
                                             L      D    E   I+  V  +S+
Sbjct: 116 KGSYGEAMAKHQKRFKANKEKLQKWRMALQQVADLSGYHFKDGDAYEYKFIQSIVEQVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           +++   P    D  VG+ S + E+   L  GS +  + +GI G+GG+GKTT+A A+Y+ I
Sbjct: 176 EINRA-PLHVADYPVGLGSQVIEVRKLLDVGSDDVVHIIGIHGMGGLGKTTLAVAVYNLI 234

Query: 207 SSHFEGSYFMQNIRDESE----------KVGGLANIHL-------NFERRRLSRMKVLIV 249
           + HF+ S F+QN+R+ES           K+ G  +I L       +  + RL R KVL++
Sbjct: 235 APHFDESCFLQNVREESNLKHLQSSLLSKLLGEKDITLTSWQEGASMIQHRLRRKKVLLI 294

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+   +Q+  ++G+ D F PGSRVIITTRD  LLK H   R    +EVK L++N +L 
Sbjct: 295 LDDVDKREQLKAIVGKPDWFGPGSRVIITTRDKHLLKYHEVERT---YEVKVLNHNAALH 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           L + NAF +      + ++ N V+ YA+G+PLAL+V+GS L G +  EWESA+   KR+P
Sbjct: 352 LLTWNAFKREKIDPIYDDVLNRVVTYASGLPLALEVIGSNLYGKTVAEWESALETYKRIP 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGK 428
             +I K+L+VS+D L++E+QN+FLD AC FKG++   V +   A   +  K  I  LV K
Sbjct: 412 SNEILKILQVSFDALEEEQQNVFLDIACCFKGHEWTEVDDIFRALYGNGKKYHIGVLVEK 471

Query: 429 SLVTISNNK---ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG 485
           SL+  + N    + MH+L+Q+MG EI RQ S ++PGKR RLW P+DI QVL  NT     
Sbjct: 472 SLIKYNRNNRGTVQMHNLIQDMGREIERQRSPEEPGKRKRLWSPKDIIQVLKHNT----- 526

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN--- 542
                       G S +    EI C    +  KE  +E   ++   +  L  L + N   
Sbjct: 527 ------------GTSKI----EIICLDSSISDKEETVEWNENAFMKMENLKILIIRNGKF 570

Query: 543 -------CSGLKSVSSRL----CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
                    GL+ +        C   +   +NL  C    KLP+   ++ S E+      
Sbjct: 571 SIGPNYIPEGLRVLEWHRYPSNCLPSNFDPINLVIC----KLPD--SSITSFEF------ 618

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSSTLLT 648
                  S K+L  L+ L    CK L  +P   +LP    +  R C SL  + +S   L 
Sbjct: 619 -----HGSSKKLGHLTVLNFDKCKFLTQIPDVSDLPNLKELSFRKCESLVAVDDSVGFLN 673

Query: 649 RSSK 652
           +  K
Sbjct: 674 KLKK 677



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 5/134 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  L  L    C  L + P++S   N+++L  ++  ++  +  S+G L++L  L    C 
Sbjct: 625 LGHLTVLNFDKCKFLTQIPDVSDLPNLKELSFRKCESLVAVDDSVGFLNKLKKLSAYGCR 684

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L S      NL SLRRL +SGC  LE  PE +G +  +  L L +   +++P S + L 
Sbjct: 685 KLTSFPP--LNLTSLRRLQISGCSSLEYFPEILGEMVKIRVLELHDLPIKELPFSFQNLI 742

Query: 605 KLSDLRLQNCKRLQ 618
            LS L L+ C+ +Q
Sbjct: 743 GLSRLYLRRCRIVQ 756



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 85/201 (42%), Gaps = 36/201 (17%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  +NL SL+ L + GCS+L+ FPEI      I  L+L +  I+ELP S  NL  L 
Sbjct: 687 TSFPP-LNLTSLRRLQISGCSSLEYFPEILGEMVKIRVLELHDLPIKELPFSFQNLIGLS 745

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL-----EKLPEEIGNL----------- 580
            L L  C  +  +   L  +  L    +  C K      E+  E +G L           
Sbjct: 746 RLYLRRCR-IVQLRCSLAMMSKLSVFRIENCNKWHWVESEEGEETVGALWWRPEFSAKNC 804

Query: 581 --------------ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
                           + YLNL+  +F  +P   K+L  L  L + +C+ LQ +  LP  
Sbjct: 805 NLCDDFFLTGFKRFAHVGYLNLSGNNFTILPEFFKELKFLRTLDVSDCEHLQKIRGLPPN 864

Query: 627 -SSIHARHCTSLKTLSNSSTL 646
                A +C SL + S S  L
Sbjct: 865 LKDFRAINCASLTSSSKSMLL 885


>gi|215261581|gb|ACJ64861.1| disease resistance protein RPP1-like protein R7 [Arabidopsis
           thaliana]
          Length = 1135

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 250/713 (35%), Positives = 370/713 (51%), Gaps = 81/713 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+ FID+ + R   I P L  AI+GSKI+IV
Sbjct: 128 KHDVFPSFHGADVRRTFLSHILESFRRKGIDPFIDNNIERSKSIGPELKEAIQGSKIAIV 187

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---------AGYCPSLG-- 123
           + S  YASS WCL+EL +I++ +   GQIV+ +FY VDP+D           +  +    
Sbjct: 188 LLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGK 247

Query: 124 -------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L    PS + D  VG+ 
Sbjct: 248 LKEQVERWRKALEDVATIAGEHSRNWSNEAEMIEKISTDVSNMLDLSIPSKDFDDFVGMA 307

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + ++  E  L     E   +GIWG  GIGKTTIA  + + +S  F+ S  M NI+     
Sbjct: 308 AHMERTEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYRR 367

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 368 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 427

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++V   S  ++  +F  NAFGQ  P  
Sbjct: 428 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVGYPSNYEAFQIFCMNAFGQKQPHE 484

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V+  A  +PL L+VLGS L+G S+ EWE  + +L+      I  +++ S+D 
Sbjct: 485 GFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIGSIIQFSFDA 544

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFS-AKIGISRLVGKSLVTISNNKITMHD 442
           L DE++ +FL  AC F     + V   L A +FS  + G+  L  KSL++I N +I MH 
Sbjct: 545 LCDEDKYLFLYIACLFNFQSVHRVEEVL-ANKFSHVRHGLDVLDEKSLISIKNGRIFMHT 603

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENTSLPTGINLDSLKELYLGGCSN 501
           LL++ G E  R++ +    ++ +L   E DI +VL+++T+      L +LK + L   S 
Sbjct: 604 LLEQFGIETSRKQFVHHGYRKHQLLVGERDICEVLDDDTT-----QLRNLKWMDLSYSSY 658

Query: 502 LKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
           LK  P +S   N+E+L L+  +++ ELPSSI  L  L  LDL +CS L  + S   N   
Sbjct: 659 LKELPNLSTATNLEELKLRNCSSLVELPSSIEKLISLQILDLQDCSSLVELPS-FGNTTK 717

Query: 559 LRRLNLSGCLKLEKLPEEI--GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
           L++L+L  C  L KLP  I   NL+ L  +N +     ++P +++  +KL +L LQNC  
Sbjct: 718 LKKLDLGNCSSLVKLPPSINANNLQELSLINCSR--VVELP-AIENATKLRELELQNCSS 774

Query: 617 LQSLPELPCGSS-----IHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           L  LP L  G++     +    C+SL  L +S   +T      + F+ SNCSN
Sbjct: 775 LIELP-LSIGTANNLWILDISGCSSLVKLPSSIGDMT----SLEGFDLSNCSN 822



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 85/161 (52%), Gaps = 28/161 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT INL SL+ L L  CS LK FPEIS +I +L L  TAI+E+P SI + SRL   ++
Sbjct: 849 TLPTNINLISLRILNLTDCSQLKSFPEISTHISELRLNGTAIKEVPLSITSWSRLAVYEM 908

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +                             E L E    L+ +  L L  +D +++P  +
Sbjct: 909 S---------------------------YFESLKEFPYALDIITDLLLVSEDIQEVPPRV 941

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
           K++S+L DLRL NC  L SLP+L    + I+A +C SL+ L
Sbjct: 942 KRMSRLRDLRLNNCNNLVSLPQLSNSLAYIYADNCKSLERL 982



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 8/171 (4%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKETA-IEELPSSIGNLSRLVDL 538
           LP+  N   LK+L LG CS+L + P    + N+++L L   + + ELP+ I N ++L +L
Sbjct: 709 LPSFGNTTKLKKLDLGNCSSLVKLPPSINANNLQELSLINCSRVVELPA-IENATKLREL 767

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
           +L NCS L  +   +    +L  L++SGC  L KLP  IG++ SLE  +L+   +  ++P
Sbjct: 768 ELQNCSSLIELPLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEGFDLSNCSNLVELP 827

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           SS+  L KL  LR+  C +L++LP    L     ++   C+ LK+    ST
Sbjct: 828 SSIGNLQKLYMLRMCGCSKLETLPTNINLISLRILNLTDCSQLKSFPEIST 878



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 9/130 (6%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP   N   L+EL L  CS+L   P     + N+  LD+   +++ +LPSSIG+++ L  
Sbjct: 755 LPAIENATKLRELELQNCSSLIELPLSIGTANNLWILDISGCSSLVKLPSSIGDMTSLEG 814

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDF 593
            DL+NCS L  + S + NL+ L  L + GC KLE LP  I NL SL  LNL +    K F
Sbjct: 815 FDLSNCSNLVELPSSIGNLQKLYMLRMCGCSKLETLPTNI-NLISLRILNLTDCSQLKSF 873

Query: 594 EKIPSSMKQL 603
            +I + + +L
Sbjct: 874 PEISTHISEL 883


>gi|356522594|ref|XP_003529931.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1068

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 268/734 (36%), Positives = 362/734 (49%), Gaps = 139/734 (18%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
           VFLSFRG D R  F  +L A+L R  I+ + DD  L RG  IS  L  AIE S  +++I 
Sbjct: 17  VFLSFRGDDTRKGFTHNLFASLERRGIKAYRDDHDLERGKVISVELIEAIEESMFALIIL 76

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY------------------ 118
           S  YASS WCL+EL KILE K +    V P+F  VDPSD  +                  
Sbjct: 77  SSNYASSTWCLDELQKILECKKE----VFPIFLGVDPSDVRHQRGSFAKAFRDHEEKFRE 132

Query: 119 --CPSLGWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                  W        S          E+ LIE  V  I KK+    P    D LVG++S
Sbjct: 133 EKKKVETWRHALREVASYSGWDSKDKHEAALIETIVGHIQKKVIPGLPCCT-DNLVGIDS 191

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            +KE+ S +     +   +GIWG GGIGKTTIA  +Y  I   F+ S F++NIR E  K 
Sbjct: 192 RMKEMYSLMGIRLKDVRLIGIWGRGGIGKTTIARKVYEAIKGDFDVSCFLENIR-EVSKT 250

Query: 227 GGLANIH----------------LNFER---------RRLSRMKVLIVFYDLTDLKQIDL 261
            GL +I                 ++F+            LS  KVL+V  D+++L Q++ 
Sbjct: 251 NGLVHIQKELSNLGVIFRDQLRIVDFDNLHDGKMIIANSLSNKKVLLVLDDVSELSQLEN 310

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G+ + F PGSRVIITTRD  LLK H    V    + + L+ N++L L    AF ++ P
Sbjct: 311 LAGKQEWFGPGSRVIITTRDKHLLKTHG---VHLTCKARALAQNEALQLICLKAFKRDQP 367

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             G+L L   +I+ A G+PLAL+VLGS+L G + E W SA+ +++  PH  IQ  LK+SY
Sbjct: 368 KKGYLNLCKEMIECARGLPLALEVLGSHLHGRNVEVWHSALEQIRSFPHSKIQDKLKISY 427

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKIT 439
           D L    Q +FLD ACFFKG D   V N L  C    +IGI  L+ + LVT+    NK+ 
Sbjct: 428 DSLQPPYQKMFLDIACFFKGMDIDEVKNILRNCGDYPEIGIDILIERCLVTLDRVKNKLG 487

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-------------------- 479
           MHDLLQEMG  IV +ES  DPGKRSRLW  +DI  VL +N                    
Sbjct: 488 MHDLLQEMGRNIVFEESPNDPGKRSRLWSEKDIDYVLTKNKGTDKIQGMVLNLVQPYDSE 547

Query: 480 ---------------------TSLPTGINL--DSLKELYLGGC----------------- 499
                                  LP G+N    +L+ L+  GC                 
Sbjct: 548 VLWNTGAFSKMGQLRLLKLCDMQLPLGLNCLPSALQVLHWRGCPLKALPLWHGTKLLEKL 607

Query: 500 --------SNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKS 548
                    NLK+ P+     N+E L L+  T++ E+  S+    +L  ++L +C  LK+
Sbjct: 608 KCIDLSFSKNLKQSPDFDAAPNLESLVLEGCTSLTEVHPSLVRHKKLAMMNLEDCKRLKT 667

Query: 549 VSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
           + S +  + SL+ LNLSGC + + LPE   ++E L  L L E    K+PSS+  L  L+ 
Sbjct: 668 LPSNM-EMSSLKYLNLSGCSEFKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAH 726

Query: 609 LRLQNCKRLQSLPE 622
           L L+NCK L  LP+
Sbjct: 727 LNLKNCKNLVCLPD 740



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 100/209 (47%), Gaps = 50/209 (23%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSRLVD 537
           +LP+ + + SLK L L GCS  K  PE   ++E L L   KET I +LPSS+G L  L  
Sbjct: 667 TLPSNMEMSSLKYLNLSGCSEFKYLPEFGESMEQLSLLILKETPITKLPSSLGCLVGLAH 726

Query: 538 LDLTNCSGLKSV-----------------SSRLC-------------------------- 554
           L+L NC  L  +                  S+LC                          
Sbjct: 727 LNLKNCKNLVCLPDTFHKLKSLKFLDVRGCSKLCSLPDGLEEMKCLEQICLSADDSLPPS 786

Query: 555 --NLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
             NL SL+R+NLS C L  E +P+E  +L  L+  +    +F  +PS + +L+KL  L L
Sbjct: 787 KLNLPSLKRINLSYCNLSKESIPDEFCHLSHLQKTDPTRNNFVTLPSCISKLTKLELLIL 846

Query: 612 QNCKRLQSLPELPCG-SSIHARHCTSLKT 639
             CK+LQ LPELP     + A +CTSL+T
Sbjct: 847 NLCKKLQRLPELPSSMQQLDASNCTSLET 875


>gi|126571551|gb|ABO21407.1| TMV resistance protein N [Nicotiana tabacum]
          Length = 1141

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 241/690 (34%), Positives = 371/690 (53%), Gaps = 98/690 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F SHL   L    I+TF D+K L  G  I   +  AIE S+ SIV
Sbjct: 12  YDVFLSFRGEDTRKTFTSHLYEVLNDRGIKTFQDEKRLEYGATIPEEICKAIEESQFSIV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           +FSE YA+SRWCLNELVKI+E KN++ Q V+P+FY VDPS                +  Y
Sbjct: 72  VFSENYATSRWCLNELVKIMECKNQFKQTVIPIFYDVDPSHVRSQKESFAKAFEEHETKY 131

Query: 119 CPSLGWMGIFDIPTSESVLIEGN---------------VNDISKKLSDLFPSDNKDQLVG 163
                 + I+ I  + +  ++G+               V+ +S KL  +  S  ++ +VG
Sbjct: 132 KNDAERIQIWRIALNAAANLKGSCDNRDKTDADCIRQIVDQVSSKLCKISLSYLQN-IVG 190

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI------SSHFEGSYFMQ 217
           +++ +++IES L     +   +GIWG+GG+GKTTIA  ++  +      S  F+G+ F++
Sbjct: 191 IDTHLEKIESLLGLEINDVRIMGIWGMGGVGKTTIARGMFDTLLGRRDSSYQFDGACFLK 250

Query: 218 NIRDESEKVGGLANIHL-NFERR----------------RLSRMKVLIVFYDLTDLKQ-I 259
           +I++    +  L NI L N  R                 RL   KVLIV  D+ D    +
Sbjct: 251 DIKENKHGMHSLQNILLSNLLREKANYNNEEEGKHQMASRLRSKKVLIVLDDIDDKDHYL 310

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G LD F  GSR+I+TTRD  L++ +       ++EV  L  ++S+ L ++ AFG+ 
Sbjct: 311 EYLAGDLDWFGDGSRIIVTTRDKNLIEKN-----DVIYEVSALPVHESIQLLNQYAFGKK 365

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P   F +LS  V+ YA G+PLAL+V GS L  +   EW SA+ ++K   + +I + LK+
Sbjct: 366 VPDEHFKKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWRSAMEQMKNNSNSEIVEKLKI 425

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKI 438
           SYDGL+  +Q +FLD ACF +G ++  ++  L++C    + G+  L+ KSLV IS  N++
Sbjct: 426 SYDGLEPIQQEMFLDIACFLRGEEKDYILQILESCHIGVEYGLRILIDKSLVFISEYNQV 485

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGG 498
            MHDL+Q+M   IV  +  KDPG+RSRLW  E++ +V++ +T         +++ +++  
Sbjct: 486 QMHDLIQDMAKYIVNFQ--KDPGERSRLWLAEEVEEVMSNSTGTM------AMEAIWVSS 537

Query: 499 CSNLKRFP-EISCNIEDLDL-------KETAIEELP----------------SSIGNLSR 534
            S+  RF  E   N++ L +          AIE LP                 SI  L  
Sbjct: 538 YSSTLRFSNEAMKNMKRLRIFNIGMSSTHDAIEYLPHNLCCFVCNNYPWESFPSIFELKM 597

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           LV L L + S L  + +   +L SLRRL+LS   +L + P+  G + +LEY++L +  + 
Sbjct: 598 LVHLQLRHNS-LPHLWTETKHLPSLRRLDLSWSKRLMRTPDFTG-MPNLEYVDLYQCSNL 655

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           E++  S+   SKL  L L  CK L+  P +
Sbjct: 656 EEVHHSLGCCSKLIQLILNGCKSLKKFPRV 685



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 89/155 (57%), Gaps = 13/155 (8%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRL 535
            +LP+ I  L SL  L + GCS L+  PE   ++++L   D ++T I   PSSI  L++L
Sbjct: 750 VALPSSICRLKSLVSLSVPGCSKLESLPEEIGDLDNLRVLDARDTLILRPPSSIVRLNKL 809

Query: 536 VDLDLTNCSGLKSV-----SSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLA 589
           + L      G K V           L+SL  L+L+ C  ++  LPE+IG+L SL+ L+L+
Sbjct: 810 IILMF---GGFKDVVNFEFPPVAEGLRSLEHLDLTCCNLIDGGLPEDIGSLSSLKKLDLS 866

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             +FE +P S+ QL  L  L L++C+RL  LPELP
Sbjct: 867 RNNFEHLPPSIAQLGALRSLDLKDCQRLTQLPELP 901



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 4/125 (3%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNL-SRLVDLDLT 541
           +N++SLK L + GCS L++ PEI   ++    + +  + I ELPSSI    + +  L   
Sbjct: 685 VNVESLKYLTVQGCSRLEKIPEIHGRMKPEIQIHMLGSGIRELPSSITQYQTHITKLLSW 744

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           N   L ++ S +C LKSL  L++ GC KLE LPEEIG+L++L  L+  +    + PSS+ 
Sbjct: 745 NMKNLVALPSSICRLKSLVSLSVPGCSKLESLPEEIGDLDNLRVLDARDTLILRPPSSIV 804

Query: 602 QLSKL 606
           +L+KL
Sbjct: 805 RLNKL 809



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 30/164 (18%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNC 543
           +L SL+ L L     L R P+ +   N+E +DL + + +EE+  S+G  S+L+ L L  C
Sbjct: 617 HLPSLRRLDLSWSKRLMRTPDFTGMPNLEYVDLYQCSNLEEVHHSLGCCSKLIQLILNGC 676

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES--------------------- 582
             LK       N++SL+ L + GC +LEK+PE  G ++                      
Sbjct: 677 KSLKKFPR--VNVESLKYLTVQGCSRLEKIPEIHGRMKPEIQIHMLGSGIRELPSSITQY 734

Query: 583 ----LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                + L+   K+   +PSS+ +L  L  L +  C +L+SLPE
Sbjct: 735 QTHITKLLSWNMKNLVALPSSICRLKSLVSLSVPGCSKLESLPE 778


>gi|356561818|ref|XP_003549175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1122

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 261/724 (36%), Positives = 382/724 (52%), Gaps = 102/724 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+++ S+       +DVFLSF G+D R  F  +L  ALC   I TFIDD+ L RG+EI 
Sbjct: 39  MAATTRSLAY----NYDVFLSFTGQDTRQGFTGYLYKALCDRGIYTFIDDQELRRGDEIK 94

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P+LS+AI+ S+I+I + S+ YASS +CL+ELV IL  K++ G +V+PVFY VDPS     
Sbjct: 95  PALSNAIQESRIAITVLSQNYASSSFCLDELVTILHCKSQ-GLLVIPVFYKVDPSHVRHQ 153

Query: 115 DAGYCPSLG---------------W-MGIFDIP-----------TSESVLIEGNVNDISK 147
              Y  ++                W M +  +            + E   I   V +IS+
Sbjct: 154 KGSYGEAMAKHQKRFKANKEKLQKWRMALHQVADLSGYHFKDGDSYEYEFIGSIVEEISR 213

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           K S        D  VG+ES + E+   L  GS +  + +GI G+GG+GKTT+A A+++ I
Sbjct: 214 KFSRA-SLHVADYPVGLESEVTEVMKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFI 272

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I L       +  + RL R KV
Sbjct: 273 ALHFDESCFLQNVREESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKV 332

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  ++GR D F PGSRVIITTRD  LLK H   R    +EVK L+ + 
Sbjct: 333 LLILDDVDKRQQLKAIVGRPDWFGPGSRVIITTRDKHLLKYHEVERT---YEVKVLNQSA 389

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L + NAF +      + ++ N V+ YA+G+PLAL+V+GS L   +  EWESA+   K
Sbjct: 390 ALQLLTWNAFKREKIDPSYEDVLNRVVTYASGLPLALEVIGSNLFEKTVAEWESAMEHYK 449

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISRL 425
           R+P  +IQ++LKVS+D L +E++N+FLD AC FKG +   V N L D      K  I  L
Sbjct: 450 RIPSDEIQEILKVSFDALGEEQKNVFLDIACCFKGYEWTEVDNILRDLYGNCTKHHIGVL 509

Query: 426 VGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP- 483
           V KSLV +S  + + MHD++Q+MG EI RQ S ++PGK  RL  P+DI QVL +NT    
Sbjct: 510 VEKSLVKVSCCDTVEMHDMIQDMGREIERQRSPEEPGKCKRLLLPKDIIQVLKDNTGTSK 569

Query: 484 ----------------------TGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLK 518
                                   + + +LK L +  C   K    FPE    +  L+  
Sbjct: 570 IEIICLDFSISDKEETVEWNENAFMKMKNLKILIIRNCKFSKGPNYFPE---GLRVLEWH 626

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--E 576
                 LPS+   ++ LV   L + S + S      +  SL+ LN   C  L K+P+  +
Sbjct: 627 RYPSNCLPSNFDPIN-LVICKLPD-SSITSFEFHGSSKASLKILNFDRCEFLTKIPDVSD 684

Query: 577 IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHC 634
           + NL+ L + N  E     +  S+  L+KL  L    C++L S P L   S  +++   C
Sbjct: 685 LPNLKELSF-NWCES-LVAVDDSIGFLNKLKTLSAYGCRKLTSFPPLNLTSLETLNLGGC 742

Query: 635 TSLK 638
           +SL+
Sbjct: 743 SSLE 746



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 93/200 (46%), Gaps = 35/200 (17%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  +NL SL+ L LGGCS+L+ FPEI     NI  L L +  I+ELP S  NL  L+
Sbjct: 724 TSFPP-LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIGLL 782

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLS-GCLKLEKLPEE------IGNLESLE----- 584
            L L +C G+  +   L  +  L    ++  C + + +  E      +G++ S E     
Sbjct: 783 FLWLDSC-GIVQLRCSLATMPKLCEFCITDSCNRWQWVESEEGEEKVVGSILSFEATDCN 841

Query: 585 -----------------YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG- 626
                            YLNL   +F  +P   K+L  L+ L + +CK LQ +  LP   
Sbjct: 842 LCDDFFFIGSKRFAHVGYLNLPGNNFTILPEFFKELQFLTTLVVHDCKHLQEIRGLPPNL 901

Query: 627 SSIHARHCTSLKTLSNSSTL 646
               AR+C SL + S S  L
Sbjct: 902 KHFDARNCASLTSSSKSMLL 921



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 8/141 (5%)

Query: 490 SLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGL 546
           SLK L    C  L + P++S   N+++L      ++  +  SIG L++L  L    C  L
Sbjct: 664 SLKILNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDSIGFLNKLKTLSAYGCRKL 723

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
            S      NL SL  LNL GC  LE  PE +G ++++  L L +   +++P S + L  L
Sbjct: 724 TSFPP--LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIGL 781

Query: 607 SDLRLQNCKRLQ---SLPELP 624
             L L +C  +Q   SL  +P
Sbjct: 782 LFLWLDSCGIVQLRCSLATMP 802


>gi|357507537|ref|XP_003624057.1| TMV resistance protein N [Medicago truncatula]
 gi|355499072|gb|AES80275.1| TMV resistance protein N [Medicago truncatula]
          Length = 1122

 Score =  338 bits (866), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 267/750 (35%), Positives = 368/750 (49%), Gaps = 150/750 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG+D R  F  HL AAL R+ I TF DDK L RG  IS  L +AI+ S  +I 
Sbjct: 26  YHVFLSFRGEDTRKGFTDHLRAALERKGITTFRDDKDLERGKNISEKLINAIKDSMFAIT 85

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS------------- 121
           I S  YASS WCL+EL  I+E  +     V+PVFY VDPSD  +                
Sbjct: 86  IISPDYASSTWCLDELQMIMECSSNNNLHVLPVFYGVDPSDVRHQRGSFEEAFRKHLEKF 145

Query: 122 -----------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                             G+ G       E++L+E     I +KL     S   + LVG+
Sbjct: 146 GQNSDRVERWRNAMNKVAGYSGWDSKGQHEALLVESIAQHIHRKLVPKL-SSCTENLVGI 204

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ES ++E+   +  G  +   +GIWG+GGIGK+TIA A+Y  I   F+ + F++N+R+ SE
Sbjct: 205 ESKVEEVNKLIGMGLNDVRFIGIWGMGGIGKSTIARAVYEAIRCEFQLTCFLENVREISE 264

Query: 225 KVGGLANI------HLNFER--------------RRLSRMKVLIVFYDLTDLKQIDLLIG 264
              GL ++      H++  R                  R KVL+V  D+ +L Q++ + G
Sbjct: 265 -TNGLVHLQRQLLSHMSISRNDFHNLYDGKKTIQNSFRRKKVLLVLDDVNELNQLENMAG 323

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           + D F PGSRVIITTRD  LL  H    V   +EV  L  N++L LF   AF  + P  G
Sbjct: 324 KQDWFGPGSRVIITTRDKHLLMTH---GVHKTYEVWMLFQNEALNLFCLKAFKGDKPQEG 380

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +L+LS  V+ Y  G+PLAL+V GSYL G + + W SA+ K++ +P   IQ  L++SY+ L
Sbjct: 381 YLDLSKEVVDYTGGLPLALEVFGSYLYGRNVDLWHSAIKKIRSVPLRKIQDKLEISYESL 440

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKITMHD 442
           D  E+++FLD ACFFKG     V++ L+ C +  KI I  L+ +SL+T+   NNK+ MHD
Sbjct: 441 DPMEKDVFLDIACFFKGMKIDKVIDILENCGYFPKIIIQVLIDRSLITLDRVNNKLGMHD 500

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN----------------------- 479
           LLQEMG  IV QES  DPG+ SRLW  EDI  VL +N                       
Sbjct: 501 LLQEMGRNIVFQESPNDPGRCSRLWSKEDIDSVLTKNKGTEKISSVVLNLLQPYEARWST 560

Query: 480 ----------------TSLPTGINL--DSLKELYLGGCSNLKRFPEISC--NIEDLDLKE 519
                             LP G++    SLK L   GC  LK   + +    + D+ L  
Sbjct: 561 EAFSKTSQLKLLNLNEVQLPLGLSCLPCSLKVLRWRGCP-LKTLAQTNQLDEVVDIKLSH 619

Query: 520 TAIEELPSSI--------------GNLSRLVD---------LDLTNCS------------ 544
           + IE+L   +               NL RL D         L L  CS            
Sbjct: 620 SKIEKLWHGVYFMEKLKYLNLKFSKNLKRLPDFSGVPNLEKLILKGCSILTEVHLSLVHH 679

Query: 545 ------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
                        LKS+  +L  + SL++L LSGC + + LPE    +E+L  L L   D
Sbjct: 680 KKVVVVSLKNCKSLKSLPGKL-EMSSLKKLILSGCSEFKFLPEFGEKMENLSILALKGTD 738

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
             K+P S+  L  L++L L++CK L  LP+
Sbjct: 739 IRKLPLSLGSLVGLTNLNLKDCKSLVCLPD 768



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 96/187 (51%), Gaps = 30/187 (16%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFP----EISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           LP  I+ L+SL  L + GCS L R P    EI C +++L   +TAI+ELPS I  L  L 
Sbjct: 766 LPDTIHGLNSLIILNISGCSRLCRLPDGLKEIQC-LKELHANDTAIDELPSFIFYLDNLK 824

Query: 537 DLDLTNCSGLKSVSSR----------------------LCNLKSLRRLNLSGC-LKLEKL 573
            L    C G  ++S+                         +L SL+ LNLS C L  E +
Sbjct: 825 VLSFAGCQGPPAMSTNWFPFNWMFGGQSASTGFRLPTSFLSLHSLKYLNLSYCNLSEESI 884

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
           P    +L SL+ L+L   +F  IPSS+ +LS+L  L L  C++LQ LPELP     + A 
Sbjct: 885 PNYFHHLSSLKSLDLTGNNFVIIPSSISKLSRLRFLCLNWCEQLQLLPELPSRIMQLDAS 944

Query: 633 HCTSLKT 639
           +C SL+T
Sbjct: 945 NCDSLET 951



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 77/138 (55%), Gaps = 3/138 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           SLP  + + SLK+L L GCS  K  PE    +E+L    LK T I +LP S+G+L  L +
Sbjct: 695 SLPGKLEMSSLKKLILSGCSEFKFLPEFGEKMENLSILALKGTDIRKLPLSLGSLVGLTN 754

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L +C  L  +   +  L SL  LN+SGC +L +LP+ +  ++ L+ L+  +   +++P
Sbjct: 755 LNLKDCKSLVCLPDTIHGLNSLIILNISGCSRLCRLPDGLKEIQCLKELHANDTAIDELP 814

Query: 598 SSMKQLSKLSDLRLQNCK 615
           S +  L  L  L    C+
Sbjct: 815 SFIFYLDNLKVLSFAGCQ 832


>gi|224114307|ref|XP_002332394.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832717|gb|EEE71194.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 516

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 212/521 (40%), Positives = 309/521 (59%), Gaps = 64/521 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           HDVFLSFRGKD R+NF SHL + L +  I+ + DD +L RG  I P+L  AIE S+ S +
Sbjct: 3   HDVFLSFRGKDTRNNFTSHLYSNLTQRGIKVYRDDSELERGKTIEPALWKAIEESRFSAI 62

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           IFS  YASS WCL+ELVKI++   + GQ V+PVFY VDPS+                   
Sbjct: 63  IFSRDYASSPWCLDELVKIVQCMKEKGQTVLPVFYDVDPSEVAEQKGKYKKAFVKHEQNF 122

Query: 119 ------------CPSL-----GWMGIFDIPT-SESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                       C S+     GW    D+    ES  I+   + IS KLS   P+ +K +
Sbjct: 123 KENLEKVRNWKDCLSMVANLSGW----DVRNRDESESIKAIADCISYKLSLTLPTISK-E 177

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           LVG++S ++ +   +   + E   +GI G+GGIGKTT+A  +Y  I   FEGS F+ N+R
Sbjct: 178 LVGIDSRLEVLNGYIGEETGEAIFIGICGMGGIGKTTVARVLYDRIRRRFEGSCFLANVR 237

Query: 221 DE-SEKVGG-------LANIHLNFE-------------RRRLSRMKVLIVFYDLTDLKQI 259
           +  +EK G        L++I +  +             +++L R+K+L+V  D+ D KQ+
Sbjct: 238 EAFAEKDGPRSLQKKLLSDILMERDINICDSSTGIEMIKQKLQRIKILVVLDDVNDRKQL 297

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L      F PGSR+IIT+RD  +L  +  +++   +E ++L+ +D+L LFS+ AF  +
Sbjct: 298 EYLAKEPGWFGPGSRIIITSRDTNVLIGNDDTKI---YEAEKLNDDDALMLFSQKAFKND 354

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            PA GF+ELS  V+ YANG+PLAL+V+GS+L   S  EW  A+N++  +P   I  VL+V
Sbjct: 355 QPAEGFVELSKQVVDYANGLPLALEVIGSFLYERSIPEWRGAINRMNEIPDCKIIDVLRV 414

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           S+DGL + ++ IFLD ACF KG  +  +   L++  F A IGI  L+ +SL+++S +++ 
Sbjct: 415 SFDGLHESDKKIFLDIACFLKGFKKDRITRILESRGFHAGIGIPVLIERSLISVSRDQVW 474

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           MHDLLQ MG EIVR ES ++PG+RSRLW  ED+   L +NT
Sbjct: 475 MHDLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNT 515


>gi|28558777|gb|AAO45748.1| MRGH5 [Cucumis melo subsp. melo]
          Length = 1092

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 251/748 (33%), Positives = 380/748 (50%), Gaps = 109/748 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R NF  HL   L ++ +  FIDD L RG +IS +L   I+ S ISIVI
Sbjct: 21  YDVFLSFRGEDTRSNFTGHLYMFLRQKGVNVFIDDGLERGEQISETLFKTIQNSLISIVI 80

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG--------- 126
           FSE YASS WCL+ELV+I+E K   GQ V+P+FY VDPSD       GW           
Sbjct: 81  FSENYASSTWCLDELVEIMECKKSKGQKVLPIFYKVDPSDVR--KQNGWFREGLAKHEAN 138

Query: 127 -IFDIPT-------------------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
            +  IP                     E+ LI+  V ++   L+   P +  + LVG++S
Sbjct: 139 FMEKIPIWRDALTTAANLSGWHLGARKEAHLIQDIVKEVLSILNHTKPLNANEHLVGIDS 198

Query: 167 IIKEI-ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
            I+ +   + +  S   N +GI+GIGGIGKTT+A A+Y  ++S FEG  +++++R+ S+ 
Sbjct: 199 KIEFLYRKEEMYKSECVNMLGIYGIGGIGKTTLAKALYDKMASQFEGCCYLRDVREASKL 258

Query: 226 VGGLANIH--------------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
             GL  +                     +N  + RL   KVLI+  D+  L+Q+  L+G 
Sbjct: 259 FDGLTQLQKKLLFQILKYDLEVVDLDWGINIIKNRLRSKKVLILLDDVDKLEQLQALVGG 318

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F  G+++I+TTR+ QLL +H   ++   +EV+ LS ++++ LF R+AF    P++ +
Sbjct: 319 HDWFGQGTKIIVTTRNKQLLVSHGFDKM---YEVQGLSKHEAIELFRRHAFKNLQPSSNY 375

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           L+LS    +Y  G PLAL VLGS+L   S+  EW   ++  +     DI+ +L++S+DGL
Sbjct: 376 LDLSERATRYCTGHPLALIVLGSFLCDRSDLAEWSGILDGFENSLRKDIKDILQLSFDGL 435

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           +DE + IFLD +C   G     V   L  C      GI++L   SL+   ++++ MHDL+
Sbjct: 436 EDEVKEIFLDISCLLVGKRVSYVKKMLSECHSILDFGITKLKDLSLIRFEDDRVQMHDLI 495

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-------------TSLPTGINLD-- 489
           ++MG +IV  ES   PGKRSRLW  +DI +V + N             T     I+LD  
Sbjct: 496 KQMGHKIVHDESHDQPGKRSRLWLEKDILEVFSNNSGSDAVKAIKLVLTDPKRVIDLDPE 555

Query: 490 ------SLKELYLGG----CSNLKRFPE-------------------ISCNIEDLDLKET 520
                 +L+ L + G    C  +K  P                    I+ ++  LDL+ +
Sbjct: 556 AFRSMKNLRILMVDGNVRFCKKIKYLPNGLKWIKWHRFAHPSLPSCFITKDLVGLDLQHS 615

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
            I      + N  RL  LDL +   LK +S       +L  L LS C  L+ +P+   +L
Sbjct: 616 FITNFGKGLQNCMRLKLLDLRHSVILKKISES-SAAPNLEELYLSNCSNLKTIPKSFLSL 674

Query: 581 ESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTS 636
             L  L+L    + +KIP S      L DL L +CK+L+ +P++   S++ +     CT+
Sbjct: 675 RKLVTLDLHHCVNLKKIPRSYISWEALEDLDLSHCKKLEKIPDISSASNLRSLSFEQCTN 734

Query: 637 LKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           L  + +S   LT+           NCSN
Sbjct: 735 LVMIHDSIGSLTKLV----TLKLQNCSN 758



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 4/143 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDL 538
           LP  I+ + L++L L  C  L+  P+ S   N++ L L++ T++  +  SIG+LS+LV L
Sbjct: 762 LPRYISWNFLQDLNLSWCKKLEEIPDFSSTSNLKHLSLEQCTSLRVVHDSIGSLSKLVSL 821

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           +L  CS L+ + S L  LKSL+ L LSGC KLE  PE   N++SL  L L      ++P 
Sbjct: 822 NLEKCSNLEKLPSYL-KLKSLQNLTLSGCCKLETFPEIDENMKSLYILRLDSTAIRELPP 880

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L+ L    L+ C  L SLP
Sbjct: 881 SIGYLTHLYMFDLKGCTNLISLP 903



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 96/217 (44%), Gaps = 61/217 (28%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDL 538
            LP+ + L SL+ L L GC  L+ FPEI  N++ L    L  TAI ELP SIG L+ L   
Sbjct: 832  LPSYLKLKSLQNLTLSGCCKLETFPEIDENMKSLYILRLDSTAIRELPPSIGYLTHLYMF 891

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE--------------------------- 571
            DL  C+ L S+      LKSL  L+LSG  + E                           
Sbjct: 892  DLKGCTNLISLPCTTHLLKSLGELHLSGSSRFEMFSYIWDPTINPVCSSSKIMETSLTSE 951

Query: 572  ----KLPEE----------------IGNLESLEYL-NLA---------EKDFEKIPSSMK 601
                ++P+E                I N++ LE L N+A         E +F  +PS + 
Sbjct: 952  FFHSRVPKESLCFKHFTLLDLEGCNISNVDFLEILCNVASSLSSILLSENNFSSLPSCLH 1011

Query: 602  QLSKLSDLRLQNCKRLQSLPELP-CGSSIHARHCTSL 637
            +   L +L L+NCK LQ +P LP C   + A  C SL
Sbjct: 1012 KFMSLRNLELRNCKFLQEIPNLPLCIQRVDATGCVSL 1048



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 36/224 (16%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPS 527
           D++  +N      + I+ ++L++L L  C  L++ P+IS   N+  L  ++ T +  +  
Sbjct: 681 DLHHCVNLKKIPRSYISWEALEDLDLSHCKKLEKIPDISSASNLRSLSFEQCTNLVMIHD 740

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE------------ 575
           SIG+L++LV L L NCS LK +  R  +   L+ LNLS C KLE++P+            
Sbjct: 741 SIGSLTKLVTLKLQNCSNLKKLP-RYISWNFLQDLNLSWCKKLEEIPDFSSTSNLKHLSL 799

Query: 576 -----------EIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                       IG+L  L  LNL +  + EK+PS +K L  L +L L  C +L++ PE+
Sbjct: 800 EQCTSLRVVHDSIGSLSKLVSLNLEKCSNLEKLPSYLK-LKSLQNLTLSGCCKLETFPEI 858

Query: 624 PCGSS---IHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
                   I     T+++ L  S   LT    H  +F+   C+N
Sbjct: 859 DENMKSLYILRLDSTAIRELPPSIGYLT----HLYMFDLKGCTN 898


>gi|357499349|ref|XP_003619963.1| Resistance gene analog protein [Medicago truncatula]
 gi|355494978|gb|AES76181.1| Resistance gene analog protein [Medicago truncatula]
          Length = 1247

 Score =  337 bits (865), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 253/747 (33%), Positives = 369/747 (49%), Gaps = 139/747 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG D R +F  +L  AL    I TFIDDK L  G+EI+PSL   IE S+ISI+
Sbjct: 22  YDVFISFRGTDTRFSFTGNLYKALSDNGIRTFIDDKDLQSGDEITPSLLKNIEDSRISIL 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------ 123
           +FSE YA+S +CL+ELV I+    + G +V+PVFY ++PS     ++ Y  +L       
Sbjct: 82  VFSENYATSSFCLDELVHIIHCSKEKGSMVIPVFYGIEPSHVRHQNSSYGEALAKHEEVF 141

Query: 124 ------------WMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKD 159
                       W    +   +            E   I   V D+S K++ + P    D
Sbjct: 142 QNNKESMERLRKWKKALNHAANLSGHHFNFGNEYEHHFIGKIVKDVSNKINHV-PLHVAD 200

Query: 160 QLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
            LVG++S I E+ S L L  +     +GI G GG+GKTT+A A+Y++I+  FE   F+ +
Sbjct: 201 YLVGLKSRISEVNSLLELESNDGVWKIGILGTGGMGKTTLAQAVYNSIADQFECKCFLHD 260

Query: 219 IRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           +R+ S K G                   G  N  +   +RRLS+ KVL++  D+  L Q+
Sbjct: 261 VRENSLKHGLEFLQEQLLSKSIRFETKFGHVNEGIPVIKRRLSQKKVLLILNDVDKLNQL 320

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L+G       GSRVIITTRD  LL +H    +  ++E   L+   +L L     F  N
Sbjct: 321 ENLVGEPGWLGHGSRVIITTRDKCLLSSHG---IKKIYEAYGLNKEQALELVRTKTFKCN 377

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
              A +  + N  +KYA+G+PLAL+V+GS L G S EE ES ++K +R+PH DIQK+L++
Sbjct: 378 KTDASYDYILNRAVKYASGLPLALEVVGSNLFGKSIEECESTLDKYERIPHADIQKILRI 437

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNN-- 436
           SYD LD+E+Q++FLD ACFFK +++      L     +  K  I  LV KSL+  +++  
Sbjct: 438 SYDSLDEEQQSVFLDIACFFKWHEKEYTQELLHGHYGYCIKSHIGVLVDKSLIKFNSDPN 497

Query: 437 -----KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS---------- 481
                 +T+HDL+++MG EIVRQESIK+PG+RSRLW  +DI  VL ENT           
Sbjct: 498 VSEFLAVTLHDLIEDMGKEIVRQESIKEPGRRSRLWCCDDIVHVLQENTGSSKIEMIILK 557

Query: 482 -LPTGINLDSLKELYLGGCSNLKRF----------------------------PEISC-- 510
             P+   +  + E      +NLK                                +SC  
Sbjct: 558 YRPSTEPVIDMNEKAFKKMTNLKTLIVEDDNFSKGPKYLPSSLRVLEWSGFTSESLSCFS 617

Query: 511 -----NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRL------------ 553
                NI++L L  +      S +  L  L  L    C  L ++ + +            
Sbjct: 618 NKKFNNIKNLTLDGSKYLTHISDVSGLPNLEKLSFHCCHSLITIHNSIGYLIKLEILDAW 677

Query: 554 -CN---------LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            CN         L SL+ L LS C  L+  PE +  + ++E + L      ++PSS K L
Sbjct: 678 GCNKLESFPPLQLPSLKELILSRCSSLKNFPELLCKMTNIEEIELHRTSIGELPSSFKNL 737

Query: 604 SKLSDLRLQNCKRLQSLPELPCGSSIH 630
           S+L  L +     L+ LPE  C S  H
Sbjct: 738 SELRHLSISFVN-LKILPE--CLSECH 761


>gi|147812101|emb|CAN61526.1| hypothetical protein VITISV_036339 [Vitis vinifera]
          Length = 2047

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 256/700 (36%), Positives = 372/700 (53%), Gaps = 101/700 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL   L    I TF D ++L++G +I+  LS  I+ S+I I+
Sbjct: 8   YDVFLSFRGEDTRKNFSDHLYTTLIANGIHTFRDSEELDKGGDIASELSRVIQKSRIFII 67

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           IFS  YA+S+WCLNELVKI E   +    + PVFY V+PS+  +                
Sbjct: 68  IFSRNYATSKWCLNELVKITERMTQKESTIHPVFYHVNPSEVRHQSGSYGEAFSNYEKDA 127

Query: 119 -------------CPSLGWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                           +G +  + +    ES ++ G  NDI ++L +  P +    ++G+
Sbjct: 128 DLEKENIVKWRAALTQVGNLSGWHVDNQYESEVLIGITNDIIRRL-NREPLNVGKNIIGM 186

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
              +++++S +   S E   VGI GIGGIGKTTIA AIY++IS  F GS F++N+R+ S+
Sbjct: 187 SFHLEKLKSLMNIESNEVCVVGISGIGGIGKTTIAKAIYNDISYEFHGSCFLKNVRERSK 246

Query: 225 -----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
                            K   ++NI   L   +  L+  KVL+V  D+  LKQ++ L   
Sbjct: 247 DNTLQLQQELLHGILRGKCLKVSNIEEGLKMIKNCLNSKKVLVVLDDVDALKQLEYLAEE 306

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            + F   S VIITTRD + L  + G  V   +EV++L+  +S+ LFSR AF QN P   +
Sbjct: 307 PEWFSTKSIVIITTRDKRFLTQY-GKHVS--YEVEKLNEEESIELFSRWAFKQNLPQEAY 363

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             LS  +I+YA G+PLAL+VLGS+  G +  +W+ A++KL+++PH++IQ VLK+SYDGL+
Sbjct: 364 RNLSYHIIEYAKGLPLALKVLGSFFLGKTRSQWKEALHKLEKIPHIEIQNVLKISYDGLN 423

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D E+ IFLD ACFF+G D+ +V   L     S + GIS L  K L+TI  NK+ MH+L+Q
Sbjct: 424 DIEKGIFLDIACFFEGEDKEVVSRILH--NVSIECGISILHDKGLITILENKLEMHNLIQ 481

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD-SLKELYLGGCSNL 502
           +MG EIVRQE  K+PGK SRLW PED+Y+VL +NT      GI LD S  E         
Sbjct: 482 QMGHEIVRQECPKEPGKWSRLWDPEDVYRVLTKNTGTEAIEGIILDISASEQIQFTTEAF 541

Query: 503 KRFPEISCNIEDLDLKETAI--------------------------------------EE 524
           K    +   I   D K  ++                                      E 
Sbjct: 542 KMMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDGYSLES 601

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           LPS+      LV+L L  CS +K +         L+ +NLS  + L K+P +I ++ +LE
Sbjct: 602 LPSNF-QADNLVELHL-RCSNIKQLCEGNMIFNILKVINLSFSVHLIKIP-DITSVPNLE 658

Query: 585 YLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            L L    +   +PS + +L  L  L  + C +L+S PE+
Sbjct: 659 ILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEI 698



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 26/193 (13%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSS-IGNLSRL 535
           SLP+ I  L  L+ L    C  L+ FPEI     N+ +L L ET ++ELPSS   +L  L
Sbjct: 670 SLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGL 729

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL------- 588
            DLDLT C  L  V   +C ++SL+ L+ S C KL+KLPE++ +L  LE L+L       
Sbjct: 730 TDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSLNFLRCEL 789

Query: 589 ----AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSS 644
                   F  IP+ + +L +L  L L +CK+L  +PELP          +SL+ L    
Sbjct: 790 PCXVRGNHFSTIPAGISKLPRLRSLNLSHCKKLLQIPELP----------SSLRALDTHG 839

Query: 645 TLLTRSSKHWDIF 657
           + +T SS  W + 
Sbjct: 840 SPVTLSSGPWSLL 852



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 79/135 (58%), Gaps = 6/135 (4%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLP+ I  L SLK L+  GCS LK FPEI  N+E+L    L +TAIEELPSSI +L  L 
Sbjct: 1112 SLPSDICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQ 1171

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L + +C  L S+   +CNL SL+ L +  C KL KLPE +G+L SLE L         I
Sbjct: 1172 CLSVESCDNLVSLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHS--YSI 1229

Query: 597  PSSMKQLSKLSDLRL 611
               +  LS L  LR+
Sbjct: 1230 GCQLPSLSGLCSLRI 1244



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 10/177 (5%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD-LKETAIE----ELPSSIGNLS 533
             SLP  I NL SLK L +  C  L + PE   ++  L+ L  T       +LPS  G  S
Sbjct: 1182 VSLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCS 1241

Query: 534  -RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEK 591
             R++D+  +N S  +++ + +C L SL+ LNLS    +E  +P EI NL SL+ L L   
Sbjct: 1242 LRILDIQNSNLSQ-RAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGN 1300

Query: 592  DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNSSTLL 647
             F  IP  + +L+ L  L L +C+ L  +PE      +   H CTSL+TLS+ S LL
Sbjct: 1301 HFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNLL 1357



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 8/117 (6%)

Query: 524  ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
            ELP+    L+ L  L L NC  L+S+ S +C LKSL+ L  SGC +L+  PE + N+E+L
Sbjct: 1089 ELPTIECPLA-LDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFPEIVENMENL 1147

Query: 584  EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
              L L +   E++PSS+  L  L  L +++C  L SLPE  C       + TSLK L
Sbjct: 1148 RKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESIC-------NLTSLKVL 1197



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 86/170 (50%), Gaps = 18/170 (10%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE----ELP--SSIGNLSR 534
           SLP+    D+L EL+L  CSN+K+  E +     L +   +      ++P  +S+ NL  
Sbjct: 601 SLPSNFQADNLVELHLR-CSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPNLEI 659

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           L+   L  C+ L S+ S +  LK LR L    CLKL   PE    +++L  L L+E D +
Sbjct: 660 LI---LEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLK 716

Query: 595 KIP-SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNS 643
           ++P SS K L  L+DL L  C+ L  +P+  C          SLK LS S
Sbjct: 717 ELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMR-------SLKALSFS 759



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 6/141 (4%)

Query: 487  NLDSLKELYLGGCSN-LKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTN 542
             LD+  EL L    N     P I C   ++ L L+    +E LPS I  L  L  L  + 
Sbjct: 1071 QLDTECELKLCLAGNEFYELPTIECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSG 1130

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPSSMK 601
            CS LKS    + N+++LR+L L+    +E+LP  I +L+ L+ L++   D    +P S+ 
Sbjct: 1131 CSELKSFPEIVENMENLRKLYLNQ-TAIEELPSSIDHLQGLQCLSVESCDNLVSLPESIC 1189

Query: 602  QLSKLSDLRLQNCKRLQSLPE 622
             L+ L  L +  C +L  LPE
Sbjct: 1190 NLTSLKVLVVDCCPKLYKLPE 1210


>gi|359493291|ref|XP_002273385.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1110

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 254/720 (35%), Positives = 372/720 (51%), Gaps = 109/720 (15%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVFLSFRG+D R+NF  HL   L R  I TF +D+  R  EI   +   IE S+ISIV+F
Sbjct: 21  DVFLSFRGEDTRNNFTVHLFKILGRMGINTFRNDEPLRREEIQSGILKTIEESRISIVVF 80

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG------------ 123
           S  YA S+WCL+EL KI+E + +  QIV+PVFY VDPSD      S G            
Sbjct: 81  SRNYAHSQWCLDELAKIMECRKQNEQIVLPVFYHVDPSDVRKQTGSFGNAFSNYERGVDE 140

Query: 124 -----WMGIFD---------IPTS--ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                W   F          +P    E  +I+  +N ++ +L    P  N   L+G++  
Sbjct: 141 KKVQRWRDAFTEAADTDGFRVPEDGDEPTIIKKIINFVNGELK--LPGHN---LIGIDGR 195

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK-- 225
           ++E++S +  GS +   +G+WG+GGIGKTTIA  IY++IS  F+G+ F+ ++  +S    
Sbjct: 196 LEELKSLIGIGSYDVRMLGVWGLGGIGKTTIARVIYNSISYQFDGASFLPSVCQQSMPNV 255

Query: 226 -------VGGLANIHLNFER----RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSR 274
                  + GL+   LN +      ++ + K+LIV  D+  L Q+  L+   D    GSR
Sbjct: 256 KKKLLCDITGLSYGGLNVDEGLNKNKIKKKKILIVVDDVDCLSQLKDLVPNGDWLGGGSR 315

Query: 275 VIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIK 334
           +IITTRD  LL  H    V  ++EV+ L + +S+ LF+  AF    P   +   S  ++ 
Sbjct: 316 IIITTRDKHLLLEHG---VDAIYEVQGLDFAESIHLFNLYAFQARFPKPAYRGFSRNIVN 372

Query: 335 YANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLD 394
           Y+ G+PLAL+V G +L   S +EWESA+ KLK     +IQ V ++SYD LD + ++IFLD
Sbjct: 373 YSEGLPLALKVFGDFLFRKSIDEWESALYKLKHQSMKEIQDVFQISYDRLDYKTKDIFLD 432

Query: 395 TACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQ 454
            ACFFKG ++  V   LD     A+  I+ L  KSL+T SNNKI MH LLQ+MG  +V Q
Sbjct: 433 IACFFKGEEREFVSRILDG----AEKAITDLSNKSLLTFSNNKIMMHPLLQQMGQGVVHQ 488

Query: 455 ESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDS---------------------- 490
              ++PGK+SRLW  ED++++L  NE T    GI LD+                      
Sbjct: 489 ACPQEPGKQSRLWRSEDVHRILLKNEGTDAIEGIFLDTSPAEPIEFTILDTSPAVPIEFT 548

Query: 491 ------------LKELYLGGCSNLKRFPEI---------SCNIEDLDLKETAIEELPSSI 529
                       LK      C ++ +  E+         S  +  L      +E LPS+ 
Sbjct: 549 TEAFKMMNKLRLLKVCRGHKCGSMVKNYEVRVSTNFEFPSYELRYLHWDGYPLEYLPSNF 608

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLN 587
                LV+L+L   S L+ +   L  L+ L+ +NLS   +L ++P+  +  NLESL  + 
Sbjct: 609 HG-ENLVELNL-RYSKLRVLWQGLKPLEKLKVINLSHSQQLIQIPDFSDTPNLESL--IL 664

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTLSNS 643
               + E IPSS+  L  L +L L +C +LQ L E+P        ++   C +LK+L  S
Sbjct: 665 KGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYSLEYLNLASCKNLKSLPES 724



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 40/220 (18%)

Query: 464 SRLWHPEDIYQV-------LNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD 516
           S +WH + +  +       L E   +P   NL SL+ L L  C NLK  PE  CN++ L 
Sbjct: 675 SSIWHLDSLVNLDLSHCSKLQELAEIPW--NLYSLEYLNLASCKNLKSLPESLCNLKCLK 732

Query: 517 -LKETAIEELPSSIGNLS---------------------------RLVDLDLTNCSGLKS 548
            L      +LP ++G+L                            +++D+  TN    ++
Sbjct: 733 TLNVIGCSKLPDNLGSLECLEKLYASSSELISPQSDSSLAGLCSLKVLDMHDTNLMQ-RA 791

Query: 549 VSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           +S  + +L SL  LNLS C   EK +P++I  L SL  L+L+   F  +  ++ QLS+L 
Sbjct: 792 ISGDIGSLYSLEELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNLFLGVTDAISQLSELR 851

Query: 608 DLRLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNSSTL 646
           +L L++CK L  +P+LP    +   H CT +KTLS++S L
Sbjct: 852 ELGLRHCKSLLEIPKLPSSLRVLDAHDCTGIKTLSSTSVL 891



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 5/125 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK + L     L + P+ S   N+E L LK  T +E +PSSI +L  LV+LDL++CS
Sbjct: 633 LEKLKVINLSHSQQLIQIPDFSDTPNLESLILKGCTNLENIPSSIWHLDSLVNLDLSHCS 692

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ ++    NL SL  LNL+ C  L+ LPE + NL+ L+ LN+      K+P ++  L 
Sbjct: 693 KLQELAEIPWNLYSLEYLNLASCKNLKSLPESLCNLKCLKTLNVI--GCSKLPDNLGSLE 750

Query: 605 KLSDL 609
            L  L
Sbjct: 751 CLEKL 755



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 8/134 (5%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETA-IEELPSSIGNLSRLVD 537
           +P   +  +L+ L L GC+NL+  P    +++   +LDL   + ++EL     NL  L  
Sbjct: 650 IPDFSDTPNLESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYSLEY 709

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L +C  LKS+   LCNLK L+ LN+ GC    KLP+ +G+LE LE L  +  +    P
Sbjct: 710 LNLASCKNLKSLPESLCNLKCLKTLNVIGC---SKLPDNLGSLECLEKLYASSSELIS-P 765

Query: 598 SSMKQLSKLSDLRL 611
            S   L+ L  L++
Sbjct: 766 QSDSSLAGLCSLKV 779


>gi|225464430|ref|XP_002264399.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1673

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 256/700 (36%), Positives = 372/700 (53%), Gaps = 101/700 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL   L    I TF D ++L++G +I+  LS  I+ S+I I+
Sbjct: 8   YDVFLSFRGEDTRKNFSDHLYTTLIANGIHTFRDSEELDKGGDIASELSRVIQKSRIFII 67

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           IFS  YA+S+WCLNELVKI E   +    + PVFY V+PS+  +                
Sbjct: 68  IFSRNYATSKWCLNELVKITERMTQKESTIHPVFYHVNPSEVRHQSGSYGEAFSNYEKDA 127

Query: 119 -------------CPSLGWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                           +G +  + +    ES ++ G  NDI ++L +  P +    ++G+
Sbjct: 128 DLEKENIVKWRAALTQVGNLSGWHVDNQYESEVLIGITNDIIRRL-NREPLNVGKNIIGM 186

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
              +++++S +   S E   VGI GIGGIGKTTIA AIY++IS  F GS F++N+R+ S+
Sbjct: 187 SFHLEKLKSLMNIESNEVCVVGISGIGGIGKTTIAKAIYNDISYEFHGSCFLKNVRERSK 246

Query: 225 -----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
                            K   ++NI   L   +  L+  KVL+V  D+  LKQ++ L   
Sbjct: 247 DNTLQLQQELLHGILRGKCLKVSNIEEGLKMIKNCLNSKKVLVVLDDVDALKQLEYLAEE 306

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            + F   S VIITTRD + L  + G  V   +EV++L+  +S+ LFSR AF QN P   +
Sbjct: 307 PEWFSTKSIVIITTRDKRFLTQY-GKHVS--YEVEKLNEEESIELFSRWAFKQNLPQEAY 363

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             LS  +I+YA G+PLAL+VLGS+  G +  +W+ A++KL+++PH++IQ VLK+SYDGL+
Sbjct: 364 RNLSYHIIEYAKGLPLALKVLGSFFLGKTRSQWKEALHKLEKIPHIEIQNVLKISYDGLN 423

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D E+ IFLD ACFF+G D+ +V   L     S + GIS L  K L+TI  NK+ MH+L+Q
Sbjct: 424 DIEKGIFLDIACFFEGEDKEVVSRILH--NVSIECGISILHDKGLITILENKLEMHNLIQ 481

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD-SLKELYLGGCSNL 502
           +MG EIVRQE  K+PGK SRLW PED+Y+VL +NT      GI LD S  E         
Sbjct: 482 QMGHEIVRQECPKEPGKWSRLWDPEDVYRVLTKNTGTEAIEGIILDISASEQIQFTTEAF 541

Query: 503 KRFPEISCNIEDLDLKETAI--------------------------------------EE 524
           K    +   I   D K  ++                                      E 
Sbjct: 542 KMMNRLRLLIVHQDAKYDSMVEHHVVGDQVQLSKMHLPANFQIPSFELTFLHWDGYSLES 601

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           LPS+      LV+L L  CS +K +         L+ +NLS  + L K+P +I ++ +LE
Sbjct: 602 LPSNF-QADNLVELHL-RCSNIKQLCEGNMIFNILKVINLSFSVHLIKIP-DITSVPNLE 658

Query: 585 YLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            L L    +   +PS + +L  L  L  + C +L+S PE+
Sbjct: 659 ILILEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEI 698



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 79/135 (58%), Gaps = 6/135 (4%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLP+ I  L SLK L+  GCS LK FPEI  N+E+L    L +TAIEELPSSI +L  L 
Sbjct: 1170 SLPSDICKLKSLKSLFCSGCSELKSFPEIVENMENLRKLYLNQTAIEELPSSIDHLQGLQ 1229

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L + +C  L S+   +CNL SL+ L +  C KL KLPE +G+L SLE L         I
Sbjct: 1230 CLSVESCDNLVSLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHS--YSI 1287

Query: 597  PSSMKQLSKLSDLRL 611
               +  LS L  LR+
Sbjct: 1288 GCQLPSLSGLCSLRI 1302



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 68/113 (60%), Gaps = 5/113 (4%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSS-IGNLSRL 535
           SLP+ I  L  L+ L    C  L+ FPEI     N+ +L L ET ++ELPSS   +L  L
Sbjct: 670 SLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLKELPSSSTKHLKGL 729

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
            DLDLT C  L  V   +C ++SL+ L+ S C KL+KLPE++ +L  LE L+L
Sbjct: 730 TDLDLTGCRNLIHVPKSICAMRSLKALSFSYCPKLDKLPEDLESLPCLESLSL 782



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 10/177 (5%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD-LKETAIE----ELPSSIGNLS 533
             SLP  I NL SLK L +  C  L + PE   ++  L+ L  T       +LPS  G  S
Sbjct: 1240 VSLPESICNLTSLKVLVVDCCPKLYKLPENLGSLRSLEELYATHSYSIGCQLPSLSGLCS 1299

Query: 534  -RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEK 591
             R++D+  +N S  +++ + +C L SL+ LNLS    +E  +P EI NL SL+ L L   
Sbjct: 1300 LRILDIQNSNLSQ-RAIPNDICCLYSLKLLNLSNFNLIEGGIPREIYNLSSLQALLLGGN 1358

Query: 592  DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNSSTLL 647
             F  IP  + +L+ L  L L +C+ L  +PE      +   H CTSL+TLS+ S LL
Sbjct: 1359 HFSSIPDGISRLTALRVLDLSHCQNLLRIPEFSSSLQVLDVHSCTSLETLSSPSNLL 1415



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 8/117 (6%)

Query: 524  ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
            ELP+    L+ L  L L NC  L+S+ S +C LKSL+ L  SGC +L+  PE + N+E+L
Sbjct: 1147 ELPTIECPLA-LDSLCLRNCEKLESLPSDICKLKSLKSLFCSGCSELKSFPEIVENMENL 1205

Query: 584  EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
              L L +   E++PSS+  L  L  L +++C  L SLPE  C       + TSLK L
Sbjct: 1206 RKLYLNQTAIEELPSSIDHLQGLQCLSVESCDNLVSLPESIC-------NLTSLKVL 1255



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 11/153 (7%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE----ELP--SSIGNLSR 534
           SLP+    D+L EL+L  CSN+K+  E +     L +   +      ++P  +S+ NL  
Sbjct: 601 SLPSNFQADNLVELHLR-CSNIKQLCEGNMIFNILKVINLSFSVHLIKIPDITSVPNLEI 659

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           L+   L  C+ L S+ S +  LK LR L    CLKL   PE    +++L  L L+E D +
Sbjct: 660 LI---LEGCTNLMSLPSDIYKLKGLRTLCCRECLKLRSFPEIKERMKNLRELYLSETDLK 716

Query: 595 KIP-SSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
           ++P SS K L  L+DL L  C+ L  +P+  C 
Sbjct: 717 ELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICA 749



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 6/140 (4%)

Query: 488  LDSLKELYLGGCSN-LKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            LD+  EL L    N     P I C   ++ L L+    +E LPS I  L  L  L  + C
Sbjct: 1130 LDTECELKLCLAGNEFYELPTIECPLALDSLCLRNCEKLESLPSDICKLKSLKSLFCSGC 1189

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPSSMKQ 602
            S LKS    + N+++LR+L L+    +E+LP  I +L+ L+ L++   D    +P S+  
Sbjct: 1190 SELKSFPEIVENMENLRKLYLNQ-TAIEELPSSIDHLQGLQCLSVESCDNLVSLPESICN 1248

Query: 603  LSKLSDLRLQNCKRLQSLPE 622
            L+ L  L +  C +L  LPE
Sbjct: 1249 LTSLKVLVVDCCPKLYKLPE 1268



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 45/229 (19%)

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPTGI--NLDSLKELYLGGCSNLKRFPEISCNIEDLDL 517
           P  + R+ +  ++Y    +   LP+    +L  L +L L GC NL   P+  C +  L  
Sbjct: 696 PEIKERMKNLRELYLSETDLKELPSSSTKHLKGLTDLDLTGCRNLIHVPKSICAMRSLKA 755

Query: 518 KETA----IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK--SLRRLNLSGCLKLE 571
              +    +++LP  + +L  L  L L          S L +LK  SL + N++G    E
Sbjct: 756 LSFSYCPKLDKLPEDLESLPCLESLSLNFLRCELPCLSGLSSLKELSLDQSNITG----E 811

Query: 572 KLPEEIGN-----------------------LESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            +P + G                        L SLE L L    F  IP+ + +L +L  
Sbjct: 812 VIPNDNGLSSLKSLSLNYNRMERGILSNIFCLSSLEELKLRGNHFSTIPAGISKLPRLRS 871

Query: 609 LRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIF 657
           L L +CK+L  +PELP          +SL+ L    + +T SS  W + 
Sbjct: 872 LNLSHCKKLLQIPELP----------SSLRALDTHGSPVTLSSGPWSLL 910


>gi|224116230|ref|XP_002331993.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832117|gb|EEE70594.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1308

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 248/689 (35%), Positives = 361/689 (52%), Gaps = 101/689 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           HDVFLSFRGK+ R+NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+IS+V
Sbjct: 22  HDVFLSFRGKETRNNFSSHLYSNLKQRGIDVYMDDRELERGKAIEPALWKAIEESRISVV 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           IFS  YASS WCL+ELVKI++   + G  V+PVFY VDPSD                   
Sbjct: 82  IFSRDYASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSDVAERKRKYEKAFVEHEQNF 141

Query: 119 ------------CPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                       C S      GW  +     SES+ I      IS KLS   P+ +K +L
Sbjct: 142 KENMEKVRNWKDCLSTVANLSGW-DVRHRNESESIRIIAEY--ISYKLSVTLPTISK-KL 197

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S ++ +   +     +   +GI G+GGIGKTT+A  +Y  I   FEGS F++NIR+
Sbjct: 198 VGIDSRLEVLNGYIGEEVGKEIFIGICGMGGIGKTTVARVLYDRIRWQFEGSCFLENIRE 257

Query: 222 ESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDL--------------------KQIDL 261
           +  K  G   +        L     +   Y   ++                    +Q+  
Sbjct: 258 DFAKKDGPRRLQEQLLSEILMERASVWDSYRGIEMIKRRLRLKKILLLLDDVDDKEQLKF 317

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L      F PGSR+IIT+RD Q+L  +    V  ++E ++L+ +D+LTLFS+ AF  + P
Sbjct: 318 LAEEPGWFGPGSRIIITSRDKQVLTRNG---VDRIYEAEKLNDDDALTLFSQKAFKNDQP 374

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           A  F+ELS  V+ YANG+PLAL+V+GS++ G S  EW SA+N++  +   +I  VL++S+
Sbjct: 375 AEDFVELSKQVVGYANGLPLALEVIGSFMHGRSILEWRSAINRIYDILDREIIDVLRISF 434

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGL + E+ IFLD ACF KG  +  ++  LD+C F A IG   L+ KSL+++S +++ MH
Sbjct: 435 DGLHELEKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSRDRVWMH 494

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----PTGINLDSLKELYLG 497
           +LLQ MG EIVR E  K+PGKRSRLW  +D++  L +NT         +++  +KE    
Sbjct: 495 NLLQIMGKEIVRCEDPKEPGKRSRLWTYKDVFLALMDNTGKEKIEAIFLDMPGIKEAQW- 553

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGN--------------------LSRLVD 537
              N+K F ++S  +  L +    + E P  + N                    +  LV+
Sbjct: 554 ---NMKAFSKMS-RLRLLKIDNVQLSEGPEDLSNELRFIEWHSYPSKSLPSGLQVDELVE 609

Query: 538 LDLTNCSGLKSVSSRLCNLKS---LRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKD 592
           L + N     S+    C  KS   L+ +NLS  L L K P+  G  NLESL         
Sbjct: 610 LHMAN----SSLEQLWCGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCT--S 663

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             ++  S+    KL  + L NCK ++ LP
Sbjct: 664 LSEVHPSLAHHKKLQYVNLVNCKSIRILP 692



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 89/145 (61%), Gaps = 3/145 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SL    L GCS L++FP+I  N+ +L    L ET I +L SSI +L  L  L
Sbjct: 691 LPNNLEMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLL 750

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE++G +ESL+  + +     ++P+
Sbjct: 751 SMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPA 810

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL 623
           S+  L  L  L L  CKR+  LP L
Sbjct: 811 SIFILKNLKVLSLDGCKRIVVLPSL 835



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L GCS LK  PE    +E LD      T+I +LP+SI  L  L 
Sbjct: 760 SIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLK 819

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            L L  C  +  + S L  L SL  L L  C L+   LPE+IG L SL+ L+L++ +F  
Sbjct: 820 VLSLDGCKRIVVLPS-LSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFVS 878

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           +P S+ QL +L  L L++C  L+SLPE+P
Sbjct: 879 LPKSINQLFELEMLVLEDCTMLESLPEVP 907



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)

Query: 1    MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
            +ASSSS        K +VF   R  D    F ++L + L +  I  F + +  +   I  
Sbjct: 1025 LASSSSYHQW----KANVFPGIRVADTGDAF-TYLKSDLAQRFIIPF-EMEPEKVMAIRS 1078

Query: 61   SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
             L  AIE S++SI+IF++  A   WC  ELVKI+   ++     V PV Y V  S
Sbjct: 1079 RLFEAIEESELSIIIFAKDCAYLPWCFEELVKIVGFMDEMRSDTVFPVSYDVKQS 1133


>gi|255561510|ref|XP_002521765.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223538978|gb|EEF40575.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1018

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 256/781 (32%), Positives = 381/781 (48%), Gaps = 152/781 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K++V LSF+ +D  +NFVSHL   L  E I T     +  G ++      AI+ S++ +V
Sbjct: 24  KYNVILSFKDED--NNFVSHLYRKLSLEGIHT-----VENGGKLE--FPVAIQESRLIVV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG----------------- 117
           + SE YA S  CL+ELVKI +   K  ++VVP+F+ VDP D G                 
Sbjct: 75  VLSEKYACSAQCLDELVKITDCWEKTRKMVVPIFHNVDPDDLGNQRGKVAEAFAKHEENF 134

Query: 118 -------------YCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                             GW  +      E++ IE  V DIS KL     +D   +LVG+
Sbjct: 135 KEKVKMWKDALTKVASICGWDSL---QWEETIFIEQIVRDISDKLIYTSSTDT-SELVGM 190

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
            S I E+E +L       + VGIWG+GGIGKTTIA  IY  +SS FE   F+ N+++  E
Sbjct: 191 GSHIAEMEKKLCLELNGVHMVGIWGMGGIGKTTIAKLIYDMLSSQFEVHCFLSNVKEHFE 250

Query: 225 KVGGLA---------------------NIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           K G                        N   N  +R L   KVL+V  D+ D KQ++ L 
Sbjct: 251 KHGAAVLQQKLLSNVLSERRSLNAWTFNASFNVIKRALHHRKVLLVLDDVDDYKQLEALA 310

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
              + F  GSR+IIT+RD  LL +H    V  ++EV+ L  + +L LFS +AF QN+   
Sbjct: 311 REPNWFGEGSRIIITSRDYHLLDSHG---VESIYEVQYLKTDHALQLFSLHAFKQNNAKI 367

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
            +LEL+     YA G+PLA++V GS+L G +  EW+S  NKL ++P + I  VL++S++G
Sbjct: 368 EYLELTKQFSSYAKGLPLAVKVFGSFLNGRNILEWQSVKNKLAKIPCIGIHDVLRISFEG 427

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDL 443
           LD+ ++++FLD ACFF G  +    + L  C F   I  + L  K+L+TI +N++ +HDL
Sbjct: 428 LDETQRDVFLDIACFFNGLSKEFARDILGGCGFFPDIAFAVLKDKALITIDDNELLVHDL 487

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLK--------- 492
           L+EMG EIV QES ++PGKRSRLW P+DI+ VL ++  T +  GI LD+ K         
Sbjct: 488 LREMGHEIVYQESKEEPGKRSRLWIPDDIFHVLTKSTGTKIVEGIFLDTFKVRKMHLSSE 547

Query: 493 -----------ELYLGG-----------------CSNLKRF-----PEISC-------NI 512
                      + Y  G                  SNL+ F     P  S        N+
Sbjct: 548 AFAKMRNLRMLKFYYTGSKYMNKVHLPDEGLHYMSSNLRLFHWEGYPSKSLPSSFHAENL 607

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            +L+L  + +E+L + + +L  L  +DL+    L  +   L   ++L R+ L+ C  L  
Sbjct: 608 IELNLVGSNLEQLWTGVQHLVNLKRIDLSYSRHLTRIPD-LSKAQNLERMELTTCQNLAA 666

Query: 573 LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL-------- 623
           +   +  L  L +L+L++  +   +P  +  L+ L  L L +C  L  LPE+        
Sbjct: 667 VSSSVQCLNKLVFLDLSDCTNLRSLPGGI-NLNSLKALVLTSCSNLAKLPEISGDIRFLC 725

Query: 624 --------------------PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
                               PC   + A HCTSL+ +    +L     ++WD   F+NC 
Sbjct: 726 LSGTAIEELPQRLRCLLDVPPCIKILKAWHCTSLEAIPRIKSLWEPDVEYWD---FANCF 782

Query: 664 N 664
           N
Sbjct: 783 N 783



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 70/169 (41%), Gaps = 38/169 (22%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP GINL+SLK L L  CSNL + PEIS +I  L L  TAIEELP  +  L     LD+
Sbjct: 690 SLPGGINLNSLKALVLTSCSNLAKLPEISGDIRFLCLSGTAIEELPQRLRCL-----LDV 744

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE---------------EIGNLESLEY 585
             C               ++ L    C  LE +P                   NL+  E 
Sbjct: 745 PPC---------------IKILKAWHCTSLEAIPRIKSLWEPDVEYWDFANCFNLDQKET 789

Query: 586 LNLAEK---DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
            NLAE     F  + ++ KQ+        Q C     +PE  C   I +
Sbjct: 790 SNLAEDAQWSFLVMETASKQVHDYKGNPGQFCFPGSEVPESFCNEDIRS 838


>gi|359493383|ref|XP_002279002.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 945

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 257/689 (37%), Positives = 372/689 (53%), Gaps = 82/689 (11%)

Query: 1   MASSSS---SINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGN 56
           MAS+S+   S   I H  +DVFLSFRG+D R NF  HL   L    I TF DD+ L +G 
Sbjct: 1   MASTSTQKASSVTISHT-YDVFLSFRGEDTRKNFTDHLYKNLDAYGICTFRDDEELEKGR 59

Query: 57  EISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD- 115
           +I+  LS AIE SKI IVIFS+ YA+SRWCLNEL+KI+ES  K G+IV+P+FY V+PSD 
Sbjct: 60  DIAFDLSRAIEESKIFIVIFSKNYANSRWCLNELLKIIESMEKEGKIVLPIFYHVNPSDV 119

Query: 116 ----AGYCPSLG----------------WMGIFDIPTS----------ESVLIEGNVNDI 145
                 Y  +                  W       ++          E+ +++   +DI
Sbjct: 120 RKQLGSYGDAFSNHEKDADEEKKARIQKWRTALSKASNLSGWHIDEQYETNVLKEITDDI 179

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            ++L+   P +    +VG+   +++++S +     E   VGI GIGGIGKTT+A AIY+ 
Sbjct: 180 IRRLNHDQPLNVGKNIVGMSFHLEKLKSLMKKKFNEVCVVGICGIGGIGKTTVAMAIYNE 239

Query: 206 ISSHFEGSYFMQNIRDESE-----------------KVGGLANIH--LNFERRRLSRMKV 246
           +S+ ++GS F++ +++ SE                 K   L+NI   +   +R LS  +V
Sbjct: 240 LSNQYDGSSFLRKVKERSERDTLQLQHELLQDILRGKSLKLSNIDEGVKMIKRSLSSKRV 299

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L+VF D+ +LKQ++ L      F   S +IITTRD  LL  +    V   +EV  L+  +
Sbjct: 300 LVVFDDVDNLKQLEYLAEEQGWFGAKSTIIITTRDKNLLAQYG---VNIEYEVTTLNEEE 356

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS-YLKGMSEEEWESAVNKL 365
           ++ LFS  AF QN P     +L   V++YA G+PLAL+VLGS +    ++EEW+SA+ KL
Sbjct: 357 AIELFSLWAFRQNLPNKVDQDLFYEVVRYAKGLPLALKVLGSNFFDKKTKEEWKSALEKL 416

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           K+     I  VL+ SYDGLD  +++IFLD ACFFKG D+  V   L      AK GI  L
Sbjct: 417 KKSSDERIYSVLRTSYDGLDSVDKDIFLDIACFFKGKDKDFVSRILGP---YAKNGIRTL 473

Query: 426 VGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
             K L+TIS N + MHD++Q+MG  IV QE  KDPG RSRLW   D   VL +NT     
Sbjct: 474 EDKCLITISANMLDMHDMVQQMGWNIVHQECPKDPGGRSRLW-GSDAEFVLTKNTGTQAI 532

Query: 485 ---GINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
               + + +L+ +     +  K        +  L + ++ +E+L        R+    L 
Sbjct: 533 EGLFVEISTLEHIEFTPKAFEKMHRLRLLKVYQLAIYDSVVEDL--------RVFQAALI 584

Query: 542 NCSGLK------SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
           + +  K       V   +C+L SL+ L+LS C  +  +P +I  L SLE LNL    F  
Sbjct: 585 SSNAFKVFLVEDGVVLDICHLLSLKELHLSSC-NIRGIPNDIFCLSSLEILNLDGNHFSS 643

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           IP+ + +L  L+ L L++C +LQ +PELP
Sbjct: 644 IPAGISRLYHLTSLNLRHCNKLQQVPELP 672


>gi|296089468|emb|CBI39287.3| unnamed protein product [Vitis vinifera]
          Length = 1166

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 265/711 (37%), Positives = 376/711 (52%), Gaps = 107/711 (15%)

Query: 7   SINMIPHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSS 64
           S+ +I H   +DVFLSFRG+D R+NF +HL   L  + I TFIDD KL RG  ISP+L +
Sbjct: 61  SLVLISHSWSYDVFLSFRGEDTRNNFTAHLYQELRTKGINTFIDDDKLERGRVISPALVT 120

Query: 65  AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYC 119
           AIE S  SI++ SE YASS+WCL EL KILE     GQ V+P+FY VDPSD       + 
Sbjct: 121 AIENSMFSIIVLSENYASSKWCLEELAKILECMKTRGQRVLPIFYNVDPSDVRNHRGKFG 180

Query: 120 PSLG---------------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFP 154
            +L                W           G      +E +LI+  V  +  KL ++  
Sbjct: 181 AALAEHEKNLTENMERVQIWKDALTQVANLSGWESRNKNEPLLIKEIVKHVLNKLLNICS 240

Query: 155 SDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
            D  ++LVG+++ I+EI+ +L   S +   +GIWG+GGIGKTT+A A+Y+ IS  FE   
Sbjct: 241 GDT-EKLVGIDARIQEIKMRLRLESDDVGMIGIWGMGGIGKTTLARALYNEISRQFEAHS 299

Query: 215 FMQNI---------------------RDESEKVGGLANIHLNFERRRLSRMKVLIVFYDL 253
           F++++                      ++   + GL +I     + RL   KVL+V  ++
Sbjct: 300 FLEDVGKVLANEGLIKLQQIFLSSLLEEKDLNMKGLTSI-----KARLHSKKVLVVLDNV 354

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            D    + LIG  D F  GSR+IIT RD  L+     S     +EV + + +++      
Sbjct: 355 NDPTIFECLIGNQDWFGRGSRIIITARDKCLI-----SHGVDYYEVPKFNSDEAYEFIKC 409

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           ++         F+ELS  +I YA G+PLAL+VL   L  MS+EE  + ++KLK   +  I
Sbjct: 410 HSLKHELLRGDFMELSTSMIGYAQGLPLALKVLRPILFSMSKEESRNQLDKLKSTLNKKI 469

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           ++VL++SYDGLDD+E+NIFLD ACFFKG D+  V+  LD C F    GI  L+ KSL++I
Sbjct: 470 EEVLRISYDGLDDKEKNIFLDIACFFKGEDKDYVIEILDGCGFFPLCGIRSLIDKSLISI 529

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI--NLD 489
             NK  MHDL+QEMG EIVRQ+S+++ GKRSRL   EDIY VL +NT      GI  NL 
Sbjct: 530 YGNKFQMHDLIQEMGLEIVRQQSLQELGKRSRLLFHEDIYDVLKKNTGSEKIEGIFLNLF 589

Query: 490 SLKELY------LGGCSNLKRFP-----EISCNIED------------------------ 514
            L+E          G S L+        +IS N ED                        
Sbjct: 590 HLQETIDFTTQAFAGMSKLRLLKVYQSDKISRNSEDTFMKENFKVRFSSNFKFCYDELRY 649

Query: 515 LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           LDL   +++ LP+   N   LV L +  CS ++ +   +  L+ L+R++LS    L + P
Sbjct: 650 LDLYGYSLKSLPNDF-NAKNLVHLSMP-CSRIEQLWKGIKVLEKLKRMDLSHSKYLIETP 707

Query: 575 EEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             +  + +LE L L +     K+  S++ L  L  L L+NCK L+SLP  P
Sbjct: 708 -NLSRVTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCKMLKSLPSGP 757



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 94/181 (51%), Gaps = 22/181 (12%)

Query: 481 SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+G  +L SL+ L L GCS  ++F E   N+E   +L    TA+ ELPSS+     LV
Sbjct: 752 SLPSGPYDLKSLEILILSGCSKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSRNLV 811

Query: 537 DLDLTNCSGLKSVS----SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES---------- 582
            L L  C G  S S     R  N    R  NLSG   L  L     NL            
Sbjct: 812 ILSLEGCKGPPSASWWFPRRSSNSTGFRLHNLSGLCSLSTLNLSYCNLSDETNLSSLVLL 871

Query: 583 --LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-IHARHCTSLKT 639
             LEYL+L   +F  +P+ + +LS+L D++L+NC RLQ LP+LP     + AR+CTSLK 
Sbjct: 872 SSLEYLHLCGNNFVTLPN-LSRLSRLEDVQLENCTRLQELPDLPSSIGLLDARNCTSLKN 930

Query: 640 L 640
           +
Sbjct: 931 V 931



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK + L     L   P +S   N+E L L++  ++ ++  S+ +L  L  L L NC 
Sbjct: 689 LEKLKRMDLSHSKYLIETPNLSRVTNLERLVLEDCVSLCKVHPSLRDLKNLKFLSLKNCK 748

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS+ S   +LKSL  L LSGC K E+  E  GNLE L+ L        ++PSS+    
Sbjct: 749 MLKSLPSGPYDLKSLEILILSGCSKFEQFLENFGNLEMLKELYADGTALRELPSSLSLSR 808

Query: 605 KLSDLRLQNCK 615
            L  L L+ CK
Sbjct: 809 NLVILSLEGCK 819


>gi|359493227|ref|XP_002264747.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1536

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 256/736 (34%), Positives = 377/736 (51%), Gaps = 135/736 (18%)

Query: 14  PKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKIS 72
           P +DVFLSFRG D R NF  +L   L R  I+TF DD+ L +G  I+  LS AI+ S+I 
Sbjct: 17  PNYDVFLSFRGVDTRKNFTDYLYTTLVRYGIQTFRDDEELEKGGIIASDLSRAIKESRIF 76

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF---- 128
           ++IFS+ YA SRWCLNELVKI E   + G +V+P+FY VDPSD          GIF    
Sbjct: 77  MIIFSKNYAYSRWCLNELVKITECARQEGSMVLPIFYHVDPSDIR-----KQSGIFGDAL 131

Query: 129 -----DIPTSESVLIEGNVNDISKKLS-------DLFPSDNKDQLVGV------------ 164
                D    +  +I+     +++  S       D F ++  ++++              
Sbjct: 132 AHHERDADEKKKEMIQKWRTALTEAASLSGWHVDDQFETEVVNEIINTIVGSLKRQPLNV 191

Query: 165 -ESIIK---EIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQ 217
            E+I+     +E   L  +TE N V + GI G G   KTTIA AIY+ IS  ++ S F++
Sbjct: 192 SENIVGISVHLEKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLR 251

Query: 218 NIRDES-----------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQ 258
           NIR++S                 EK   ++NI   +   +R L+  +VL++  D+ DLKQ
Sbjct: 252 NIREKSQGDTLQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQ 311

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L  + D F   S +IIT+RD Q+L  +    V   +EV++    +++ LFS  AF +
Sbjct: 312 LKHLAQKKDWFNAKSTIIITSRDKQVLTRYG---VDTPYEVQKFDKKEAIELFSLWAFQE 368

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           N P   +  LS  +I+YA+G+PLAL++LG+ L G    EWESA+ KLKR+PHM+I KVL+
Sbjct: 369 NLPKEAYENLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLR 428

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           +S+DGLDD ++ IFLD ACFFKG  +  V   L      A+ GI+ L  K L+TIS N +
Sbjct: 429 ISFDGLDDMDKEIFLDVACFFKGKSKDFVSRILGP---HAEYGIATLNDKCLITISKNMM 485

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLW---------------------HPEDIYQVLN 477
            MHDL+Q+MG EI+RQE + D G+RSR+W                     H +D Y  ++
Sbjct: 486 DMHDLIQQMGKEIIRQECLDDLGRRSRIWDSDAYDVLTRNMMDRLRLLKIHKDDEYGCIS 545

Query: 478 ENT-----------------------------------SLPTGINLDSLKELYLGGCSNL 502
             +                                   SLPT  +   L EL L G SN+
Sbjct: 546 RFSRHLDGKLFSEDHLPRDFEFPSYELTYFHWDGYSLESLPTNFHAKDLVELILRG-SNI 604

Query: 503 K---RFPEISCNIEDLDLKETA-IEELP--SSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
           K   R  ++   +  ++L  +  + E+P  SS+ NL  L    L  C  L+ +   +   
Sbjct: 605 KQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEILT---LKGCVKLECLPRGIYKW 661

Query: 557 KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP--SSMKQLSKLSDLRLQNC 614
           K L+ L+   C KL++ PE  GN+  L  L+L+    E++P  SS   L  L  L  + C
Sbjct: 662 KHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFGHLKALKILSFRGC 721

Query: 615 KRLQSLP-ELPCGSSI 629
            +L  +P ++ C SS+
Sbjct: 722 SKLNKIPTDVCCLSSL 737



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 99/172 (57%), Gaps = 8/172 (4%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSS--IGNLSRL 535
           LP GI     L+ L  G CS LKRFPEI  N   + +LDL  TAIEELPSS   G+L  L
Sbjct: 654 LPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFGHLKAL 713

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFE 594
             L    CS L  + + +C L SL  L+LS C  +E  +P +I  L SL+ LNL   DF 
Sbjct: 714 KILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFR 773

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTL 646
            IP+++ +LS+L  L L +C+ L+ +PELP    +   H  +L TLS +S L
Sbjct: 774 SIPATINRLSRLQVLNLSHCQNLEHIPELPSSLRLLDAHGPNL-TLSTASFL 824



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 103/219 (47%), Gaps = 55/219 (25%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I    SL  L   GCS L+ FPEI  ++E    LDL  +AI+E+PSSI  L  L 
Sbjct: 1101 SLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQ 1160

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD---- 592
            DL+L  C  L ++   +CNL SL+ L +  C +L+KLPE +G L+SLE L + + D    
Sbjct: 1161 DLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSMNC 1220

Query: 593  -------------------------------------------FEKIPSSMKQLSKLSDL 609
                                                       F  IP  + QL KL  L
Sbjct: 1221 QFPSLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKLIVL 1280

Query: 610  RLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
             L +CK LQ +PE P    ++ A  CTSLK    SS+LL
Sbjct: 1281 NLSHCKLLQHIPEPPSNLRTLVAHQCTSLKI---SSSLL 1316



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 13/130 (10%)

Query: 512  IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
             ED D+KE  I E P  +  L       L  C  LKS+ S +C  KSL  L   GC +LE
Sbjct: 1071 FEDSDMKELPIIENPLELDGLC------LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLE 1124

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
              PE + ++E L+ L+L     ++IPSS+++L  L DL L  CK L +LPE  C      
Sbjct: 1125 SFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESIC------ 1178

Query: 632  RHCTSLKTLS 641
             + TSLKTL+
Sbjct: 1179 -NLTSLKTLT 1187


>gi|15227238|ref|NP_179024.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|330251184|gb|AEC06278.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1215

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 255/767 (33%), Positives = 380/767 (49%), Gaps = 147/767 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR +F+SH+     R+ I+TFID+ + R   I P L  AI+GSKI++V
Sbjct: 55  KHDVFPSFHGADVRKSFLSHILKEFKRKGIDTFIDNNIERSKSIGPELIEAIKGSKIAVV 114

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           + S+ YASS WCLNELV+I++ +    Q V+ +FY VDP+D                   
Sbjct: 115 LLSKDYASSSWCLNELVEIMKCRKMLDQTVMTIFYEVDPTDVKKQTGDFGKVFKKTCMGK 174

Query: 119 --CPSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
               S  W+  + ++ T          +E+ +IE    DIS KL++  P  + D LVG+ 
Sbjct: 175 TNAVSRKWIEALSEVATIAGEHSINWDTEAAMIEKISTDISNKLNNSTPLRDFDGLVGMG 234

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + ++++E  L   S E   +GIWG  GIGKTTI   +Y+ +SS FE S FM+NI+     
Sbjct: 235 AHMEKLELLLCLDSCEVRMIGIWGPPGIGKTTIVRFLYNQLSSSFELSIFMENIKTMHTI 294

Query: 221 -----DESEKV----GGLANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                D S K+      L+ I         HL   + RL   KVL+V  D+    Q+D L
Sbjct: 295 LASSDDYSAKLILQRQFLSKILDHKDIEIPHLRVLQERLYNKKVLVVLDDVDQSVQLDAL 354

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
                 F P SR++ITT+D +LLK HR   + ++++V   + +D+L +F   AFGQ  P 
Sbjct: 355 AKETRWFGPRSRILITTQDRKLLKAHR---INNIYKVDLPNSDDALQIFCMYAFGQKTPY 411

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
            GF +L+  V       PL L+V+GSY + MS++EW   + +L+      I+ VLK SYD
Sbjct: 412 DGFYKLARKVTWLVGNFPLGLRVVGSYFREMSKQEWRKEIPRLRARLDGKIESVLKFSYD 471

Query: 383 GLDDEEQNIFLDTACFFKGN-----DQYLVMNFLD-ACRFSAKIGISRLVGKSLVTISNN 436
            L DE++++FL  ACFF        + +L   FLD A RF        L  KSL++I++N
Sbjct: 472 ALCDEDKDLFLHIACFFNHESIEKLEDFLGKTFLDIAQRFHV------LAEKSLISINSN 525

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS---LPTGINLD---- 489
            + MHD L ++G EIVR++S+++PG+R  L    DI +VL ++T+      GI LD    
Sbjct: 526 FVEMHDSLAQLGKEIVRKQSVREPGQRQFLVDARDISEVLADDTAGGRSVIGIYLDLHRN 585

Query: 490 ----SLKELYLGGCSNLK---------RFPEISC-------------------------- 510
               ++ E    G SNL+          FP I C                          
Sbjct: 586 DDVFNISEKAFEGMSNLQFLRVKNFGNLFPAIVCLPHCLTYISRKLRLLDWMYFPMTCFP 645

Query: 511 ---NIE---DLDLKETAIEELPSSI--------------GNLSRLVD---------LDLT 541
              N E   +L++  + +E+L   I               NL  L D         L+L 
Sbjct: 646 SKFNPEFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELPDLSSATNLEVLNLN 705

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
            CS L  +   + N   L +L LSGC  L +LP  IGN  +L+ ++ +  ++  ++PSS+
Sbjct: 706 GCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSI 765

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSS----IHARHCTSLKTLSNS 643
              + L +L L  C  L+ LP      +    +H   C+SLK L +S
Sbjct: 766 GNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSS 812



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 98/177 (55%), Gaps = 9/177 (5%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD----LKETAIEELPSSIGNLSRLV 536
           LP+ I N  +LKEL L  CS+LK  P    N  +L     +  ++++ELPSSIGN + L 
Sbjct: 761 LPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLK 820

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEK 595
           +L LT CS L  + S + N  +L +L L+GC  L +LP  IG   +L+ LNL       +
Sbjct: 821 ELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVE 880

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSSTLLTR 649
           +PS +  L KLS+LRL+ CK+LQ LP    L   + +    C  LKT    ST + R
Sbjct: 881 LPSFIGNLHKLSELRLRGCKKLQVLPTNINLEFLNELDLTDCILLKTFPVISTNIKR 937



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 11/159 (6%)

Query: 474 QVLNEN-----TSLPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETA-IE 523
           +VLN N       LP  I N   L +L L GCS+L   P     + N++ +D      + 
Sbjct: 700 EVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLV 759

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           ELPSSIGN + L +LDL+ CS LK + S + N  +L++L+L  C  L++LP  IGN  +L
Sbjct: 760 ELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNL 819

Query: 584 EYLNLA-EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           + L+L       K+PSS+     L  L L  C+ L  LP
Sbjct: 820 KELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELP 858



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 33/182 (18%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT INL+ L EL L  C  LK FP IS NI+ L L+ T IEE+PSS+ +  RL DL + 
Sbjct: 905  LPTNINLEFLNELDLTDCILLKTFPVISTNIKRLHLRGTQIEEVPSSLRSWPRLEDLQM- 963

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                                      L  E L E    LE +  L L++ +  ++   + 
Sbjct: 964  --------------------------LYSENLSEFSHVLERITVLELSDINIREMTPWLN 997

Query: 602  QLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            ++++L  L+L  C +L SLP+L     I  A +C SL+ L  S      ++ +    +F+
Sbjct: 998  RITRLRRLKLSGCGKLVSLPQLSDSLIILDAENCGSLERLGCSF-----NNPNIKCLDFT 1052

Query: 661  NC 662
            NC
Sbjct: 1053 NC 1054


>gi|351722733|ref|NP_001237766.1| functional candidate resistance protein KR1 [Glycine max]
 gi|18033111|gb|AAL56987.1|AF327903_1 functional candidate resistance protein KR1 [Glycine max]
          Length = 1124

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 259/719 (36%), Positives = 370/719 (51%), Gaps = 125/719 (17%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVI 75
           DVFLSFRG+D R  F  +L  AL    I TF+DDK + RG++I+  L  AIE S+I I++
Sbjct: 17  DVFLSFRGEDTRRGFTGNLYKALSDRGIHTFMDDKKIPRGDQITSGLEKAIEESRIFIIV 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG----------- 123
            SE YASS +CLNEL  IL+     G +++PVFY VDPSD   +  S G           
Sbjct: 77  LSENYASSSFCLNELDYILKFIKGKGILILPVFYKVDPSDVRNHTGSFGKALTNHEKKFK 136

Query: 124 ----------W-MGIFDIPT------------SESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                     W M +  +               E   I+  V  +SKK++   P    D 
Sbjct: 137 STNDMEKLETWKMALNKVANLSGYHHFKHGEEYEYEFIQRIVELVSKKINRA-PLHVADY 195

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            VG+ES I+E+++ L  GS +  + +GI G+GG+GKTT+A+A+Y++I+ HFE   F+QN+
Sbjct: 196 PVGLESRIQEVKALLDVGSDDVVHMLGIHGLGGVGKTTLAAAVYNSIADHFEALCFLQNV 255

Query: 220 RDESEKVGGLANIHLNFE-------------------RRRLSRMKVLIVFYDLTDLKQID 260
           R+ S+K  GL ++  N                       RL + KVL++  D+   +Q+ 
Sbjct: 256 RETSKK-HGLQHLQRNLLSEMAGEDKLIGVKQGISIIEHRLRQKKVLLILDDVDKREQLQ 314

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L GR D F PGSRVIITTRD QLL  H   R    +EV EL+   +L L +  AF    
Sbjct: 315 ALAGRPDLFGPGSRVIITTRDKQLLACHGVERT---YEVNELNEEYALELLNWKAFKLEK 371

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
               + ++ N    YA+G+PLAL+V+GS L G + E+W SA+++ KR+P+ +IQ++LKVS
Sbjct: 372 VDPFYKDVLNRAATYASGLPLALEVIGSNLSGKNIEQWISALDRYKRIPNKEIQEILKVS 431

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTIS-NNKI 438
           YD L+++EQ+IFLD AC FK  D   V + L A      K  I  LV KSL+ IS +  +
Sbjct: 432 YDALEEDEQSIFLDIACCFKKYDLAEVQDILHAHHGHCMKHHIGVLVEKSLIKISLDGYV 491

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP-TGI----------- 486
           T+HDL+++MG EIVR+ES ++PGKRSRLW P DI QVL EN      GI           
Sbjct: 492 TLHDLIEDMGKEIVRKESPQEPGKRSRLWLPTDIVQVLEENKGTSHIGIICMNFYSSFEE 551

Query: 487 -----------NLDSLKELYLGG---CSNLKRFPEISCNIE-----------DLDLKETA 521
                       + +LK L +         K FP+    +E           D  +++ A
Sbjct: 552 VEIQWDGDAFKKMKNLKTLIIRSGHFSKGPKHFPKSLRVLEWWRYPSHYFPYDFQMEKLA 611

Query: 522 IEELPSSIGNLSR------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
           I  LP   G  SR            L  L+  +C  L  +    C +  L++L+   C  
Sbjct: 612 IFNLPDC-GFTSRELAAMLKKKFVNLTSLNFDSCQHLTLIPDVSC-VPHLQKLSFKDCDN 669

Query: 570 LEKLPEEIGNLESLEYLNLAE-----KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           L  +   +G LE L  L+ AE     K+F  I     +L+ L  L+L  C  L++ PE+
Sbjct: 670 LYAIHPSVGFLEKLRILD-AEGCSRLKNFPPI-----KLTSLEQLKLGFCHSLENFPEI 722



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 8/129 (6%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTN 542
           +NL SL       C +L   P++SC  +++ L  K+   +  +  S+G L +L  LD   
Sbjct: 634 VNLTSLN---FDSCQHLTLIPDVSCVPHLQKLSFKDCDNLYAIHPSVGFLEKLRILDAEG 690

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           CS LK+       L SL +L L  C  LE  PE +G +E++  L+L +   +K P S + 
Sbjct: 691 CSRLKNFPP--IKLTSLEQLKLGFCHSLENFPEILGKMENITELDLEQTPVKKFPLSFQN 748

Query: 603 LSKLSDLRL 611
           L++L  + L
Sbjct: 749 LTRLETVLL 757


>gi|357468515|ref|XP_003604542.1| Resistance protein [Medicago truncatula]
 gi|355505597|gb|AES86739.1| Resistance protein [Medicago truncatula]
          Length = 1088

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 268/824 (32%), Positives = 395/824 (47%), Gaps = 209/824 (25%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEG 68
           N  P  K+DVF+SFRG+D+RH F+ HL  A  R++I  F+D+KL RG++IS +L  AIEG
Sbjct: 84  NDAPQLKYDVFVSFRGEDIRHGFLGHLIKAFPRKQINAFVDEKLKRGDDISHALVEAIEG 143

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------- 118
           S IS+VIFSE YASS WCL ELVKI+E K KYG+IV+PVFY VDP++  +          
Sbjct: 144 SFISLVIFSENYASSHWCLEELVKIIECKEKYGRIVLPVFYGVDPTNVRHQKKSYKSAFS 203

Query: 119 --------------------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                                 +L  +   D   +++ L+E  +N + K+LS   P + K
Sbjct: 204 ELEKRYHLSKVQNWRHALNKSANLSGIKSLDF-RNDAELLEEIINLVLKRLSK-HPINTK 261

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             L+G+   +  +ES L     +   +GIWG+GGIGKTTIA  +++   S +EG  F++ 
Sbjct: 262 G-LIGIGKPVAHLESLLRQQLEKVRVIGIWGMGGIGKTTIAEEVFNRSCSEYEGFCFLEK 320

Query: 219 IRDESEKVG-----------------------GLANIHLNFERRRLSRMKVLIVFYDLTD 255
           + +ES + G                       GL+    N+ +R + RMKVLIV  D+ +
Sbjct: 321 VSEESGRHGITFLKEKLFSTLLAEDVKINSPNGLS----NYIQRMIGRMKVLIVLDDVKE 376

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
             QI++L G LD F   SR+I+                  ++EV  L  +++L LF  NA
Sbjct: 377 EGQIEMLFGTLDWFRSDSRIILID----------------IYEVGVLKPSEALELFHLNA 420

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F Q+H    + ELS  V+ YA G+PL ++VL   L+G  +E WES ++KLK++P   +  
Sbjct: 421 FKQSHLEMEYYELSKRVVAYAKGIPLGVKVLAHLLRGKVKEVWESQLDKLKKLPSKKVYD 480

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           V+++SYD LD  EQ  FLD       +D  +V            +G+ RL  K+L+TIS 
Sbjct: 481 VMRLSYDDLDRLEQKYFLDIT----ESDNSVV------------VGLERLKDKALITISK 524

Query: 436 -NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDS 490
            N ++MHD+LQEMG E+VRQES +DP KRSRLW P+DI  VL  +          ++L S
Sbjct: 525 YNVVSMHDILQEMGREVVRQESSEDPSKRSRLWDPDDICYVLKNDKGTDAIRSIRVDLSS 584

Query: 491 LKELYL-----GGCSN-----------------------------------LKRFPE--- 507
            ++L L        +N                                   LK FP+   
Sbjct: 585 FRKLKLSPHVFAKMTNLRYLDFIGKYDLELLPQGLQSFPTDLRYICWIHYPLKSFPKKFS 644

Query: 508 ----------------ISCNIEDL-DLKETA------IEELPSSIGNLSRLVDLDLTNCS 544
                           + C ++DL +LKE        ++ELP      + L  L++T+C 
Sbjct: 645 GKNLVILDFSHSRVENLWCGVQDLVNLKEVRLTSSRFLKELP-DFSKATNLKVLNITDCL 703

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA--------------- 589
            L+SV   + +L+ L +L+LS C  L        +L SL YLNL                
Sbjct: 704 SLESVHPSIFSLEKLVQLDLSHCFSLTTFTSN-SHLSSLLYLNLGSCISLRTFSVTTNNL 762

Query: 590 -----------------------------EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                                        + + E IPSS++ L++L  L ++ C +L +L
Sbjct: 763 IKLDLTDIGINELPSLFRCQSKLEILVLRKSEIEIIPSSIQNLTRLRKLDIRYCLKLLAL 822

Query: 621 PELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           P LP         C SLKT+   ST+  +  ++     F NC N
Sbjct: 823 PVLPLSVETLLVECISLKTVLFPSTISEQFKENKKRIEFWNCFN 866


>gi|15787887|gb|AAL07535.1| resistance gene analog PU3 [Helianthus annuus]
          Length = 770

 Score =  335 bits (860), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 247/696 (35%), Positives = 371/696 (53%), Gaps = 100/696 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           HDVFLSFRG+D R++FV HL AAL ++ I+T+ DD+ L RG  I P+L  AI+ S+I++V
Sbjct: 83  HDVFLSFRGEDTRNSFVDHLYAALVQQGIQTYKDDQTLPRGERIGPALLKAIQESRIAVV 142

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS+ YA S WCL+EL  I+E  +  GQIV+P+FY VDPSD       Y  +        
Sbjct: 143 VFSQNYADSSWCLDELAHIMECMDTRGQIVIPIFYFVDPSDVRKQKGKYGKAFRKHKREN 202

Query: 123 ------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                             GW  + +  + E+  I+  V  IS +L  L  + NKD L+G+
Sbjct: 203 KQKVESWRKALEKAGNLSGW--VINENSHEAKCIKEIVATISSRLPTLSTNVNKD-LIGI 259

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           E+ +++++S+L   S +   +GIWG+GG GKTT+ASA Y+ IS  FE    +QNIR+ES 
Sbjct: 260 ETRLQDLKSKLKMESGDVRIIGIWGVGGGGKTTLASAAYAEISHRFEAHCLLQNIREESN 319

Query: 225 KVG-------------GLANIHLNFE-------RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           K G                ++ +  E        RRL    VL+V  D+ DLKQ++ L G
Sbjct: 320 KHGLEKLQEKILSLVLKTKDVVVGSEIEGRSMIERRLRNKSVLVVLDDVDDLKQLEALAG 379

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
               F  GSR+IITTRD  LL  H       ++EV  LS ++++ LF+++A+ ++     
Sbjct: 380 SHAWFGKGSRIIITTRDEHLLTRH----ADMIYEVSLLSDDEAMELFNKHAYREDELIED 435

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +  LS  V+ YA+G+PLAL++LGS+L   ++++W+SA+ KLK +P++++ + LK+SYDGL
Sbjct: 436 YGMLSKDVVSYASGLPLALEILGSFLYDKNKDDWKSALAKLKCIPNVEVTERLKISYDGL 495

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT----- 439
           + E Q +FLD ACF++  D    M  LDAC    +IG+  L+ KSL+ +S+ + +     
Sbjct: 496 EPEHQKLFLDIACFWRRRDMDEAMMVLDACNLHPRIGVKVLIQKSLIKVSDVRFSKQKVF 555

Query: 440 -MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--------ENTSLPTGINLDS 490
            MHDL++EM   IVR      P K SR+W  EDI  + +        E  +L     +D 
Sbjct: 556 DMHDLVEEMAHYIVRGAHPNHPEKHSRIWKMEDIAYLCDMGEDAVPMETEALAFRCYIDD 615

Query: 491 LKELYLGGCS----NLKRFP-------------------EISCNIEDLDLKETAIEELPS 527
                  G S    N+K+ P                   E+ C    L+L+ +  +EL  
Sbjct: 616 PGLSNAVGVSDVVANMKKLPWIRFDEYPASSFPSNFHPTELGC----LELERSRQKELWH 671

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
               L  L  LDL   S L +  +    L  L RL+L GC  LE++   IG  +SL Y++
Sbjct: 672 GYKLLPNLKILDLAMSSNLITTPN-FDGLPCLERLDLEGCESLEEIHPSIGYHKSLVYVD 730

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +      K  S + Q+  L  L L  C+ LQ  P++
Sbjct: 731 MRRCSTLKRFSPIIQMQMLETLILSECRELQQFPDI 766


>gi|356533779|ref|XP_003535437.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 983

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 264/716 (36%), Positives = 374/716 (52%), Gaps = 104/716 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA      ++ P  K+ VF+SFRG+DVR +F+SHL +AL R+ I+ ++DD  L +G+E+ 
Sbjct: 1   MAKQGMLSSLCPR-KYQVFISFRGEDVRTSFISHLRSALSRDNIKAYMDDHNLQKGDELW 59

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           PSL  AI+ S+++IV+FSE YA+S+WCLNELV+IL  +   G  V+PVFY VDPS     
Sbjct: 60  PSLCQAIQDSELAIVVFSEHYAASKWCLNELVEILHCRKSQGLAVIPVFYEVDPSHIRKY 119

Query: 117 -GYCPSL-----------------GWMGIF-----------DIPTSESVLIEGNVNDISK 147
            G C                     W                +  ++S LIE  V D+S+
Sbjct: 120 DGTCGEAISKYETYFGDKDNESIQKWKAALAEAAHISGWDCSLVRNDSQLIEKIVVDVSE 179

Query: 148 KLSDLFPSDNK-DQLVGVESIIKEIESQLLSGSTEF----NTVGIWGIGGIGKTTIASAI 202
           KLS   P   K +  V +E    E++  L     +     + +GIWG+GGIGKTTIA A+
Sbjct: 180 KLSQGTPFKLKVEDFVQIEKHCGEVKLLLSKNQDQLQKNVHVIGIWGMGGIGKTTIAKAL 239

Query: 203 YSNISSHFEGSYFMQNIRDESEKVGGLANIHL--------NFERRRLSRMKVLIVFYDLT 254
           +S +   ++   F+ N+R+ES ++G  +  H             RRLS  KVLIV  D+ 
Sbjct: 240 FSQLFPQYDAVCFLPNVREESRRIGLTSLRHKLLSDLLKEGHHERRLSNKKVLIVLDDVD 299

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
              Q+D L    +   P S+VIITTR+  LL+     R  HV+EVK  S+ +SL LFS +
Sbjct: 300 SFDQLDELCEPCNYVGPDSKVIITTRNRHLLRGRVDDR--HVYEVKTWSFAESLELFSLH 357

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF +  P  G+ +LSN  +  A GVPLAL+VLGS L   S + W+  ++KL+   +  IQ
Sbjct: 358 AFNERRPKKGYEDLSNRAVNCARGVPLALKVLGSNLYSRSIKFWDGELSKLENYRNDSIQ 417

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            VL+VSYDGL D E+ IFLD A FFKG  +  V+  LDAC F A  GI  L  K+LVT+S
Sbjct: 418 DVLQVSYDGLHDLEKKIFLDIAFFFKGEHKDDVIRILDACDFYATSGIEVLEDKALVTLS 477

Query: 435 NN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL-NENTS-LPTGINLD-- 489
           N+  I MHDL+QEMG  IVR  S +DP  RSRL   E++  VL N+N S L  GI LD  
Sbjct: 478 NSGMIQMHDLIQEMGLNIVRGGS-EDPRNRSRLRDIEEVSDVLENKNGSDLIEGIKLDLS 536

Query: 490 SLKELYL---------------------------------------------GGCSNLKR 504
           S+++L+L                                              GC  LK 
Sbjct: 537 SIEDLHLNADTFDRMTNLRILRLYVPSGKRSGNVHHSGVLSKLSSKLRYLEWNGC-RLKS 595

Query: 505 FPEISCN--IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRL 562
            P+  C   + ++ +  + + EL   + +L+ LV +DL+ C  LK+V   L     L+ +
Sbjct: 596 LPKSFCGKMLVEICMPHSHVTELWQGVQDLANLVRIDLSECKHLKNVPD-LSKASKLKWV 654

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           NLSGC  L  +   + +L++LE   L      K   S K L  L ++ +  C  L+
Sbjct: 655 NLSGCESLCDIHPSVFSLDTLETSTLDGCKNVKSLKSEKHLRSLKEISVIGCTSLK 710



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 30/213 (14%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SL +  +L SLKE+ + GC++LK F   S +I+ LDL  T IE L SSIG L++L  L++
Sbjct: 688 SLKSEKHLRSLKEISVIGCTSLKEFWVSSDSIKGLDLSSTGIEMLDSSIGRLTKLRSLNV 747

Query: 541 TNCS---------GLKSVSS-RLCNLK----------------SLRRLNLSGCLKLEKLP 574
                         LK +   R+CN +                SLR L+L  C  L +LP
Sbjct: 748 EGLRHGNLPNELFSLKCLRELRICNCRLAIDKEKLHVLFDGSRSLRVLHLKDCCNLSELP 807

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS-SIHARH 633
           E I  L  L  L L     + +P+++K L +L+ L L+NC+ L+SLP+LP       A +
Sbjct: 808 ENIWGLSKLHELRLDGSRVKTLPTTIKHLKRLNTLSLKNCRMLESLPKLPPNVLEFIATN 867

Query: 634 CTSLKTLSNSS--TLLTRSSKHWDIFNFSNCSN 664
           C SL+T+S S+      R+ K   I +  NCSN
Sbjct: 868 CRSLRTVSISTLADFALRTGKGI-IVSLQNCSN 899


>gi|20197836|gb|AAM15274.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
          Length = 972

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 255/767 (33%), Positives = 380/767 (49%), Gaps = 147/767 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR +F+SH+     R+ I+TFID+ + R   I P L  AI+GSKI++V
Sbjct: 55  KHDVFPSFHGADVRKSFLSHILKEFKRKGIDTFIDNNIERSKSIGPELIEAIKGSKIAVV 114

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           + S+ YASS WCLNELV+I++ +    Q V+ +FY VDP+D                   
Sbjct: 115 LLSKDYASSSWCLNELVEIMKCRKMLDQTVMTIFYEVDPTDVKKQTGDFGKVFKKTCMGK 174

Query: 119 --CPSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
               S  W+  + ++ T          +E+ +IE    DIS KL++  P  + D LVG+ 
Sbjct: 175 TNAVSRKWIEALSEVATIAGEHSINWDTEAAMIEKISTDISNKLNNSTPLRDFDGLVGMG 234

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + ++++E  L   S E   +GIWG  GIGKTTI   +Y+ +SS FE S FM+NI+     
Sbjct: 235 AHMEKLELLLCLDSCEVRMIGIWGPPGIGKTTIVRFLYNQLSSSFELSIFMENIKTMHTI 294

Query: 221 -----DESEKV----GGLANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                D S K+      L+ I         HL   + RL   KVL+V  D+    Q+D L
Sbjct: 295 LASSDDYSAKLILQRQFLSKILDHKDIEIPHLRVLQERLYNKKVLVVLDDVDQSVQLDAL 354

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
                 F P SR++ITT+D +LLK HR   + ++++V   + +D+L +F   AFGQ  P 
Sbjct: 355 AKETRWFGPRSRILITTQDRKLLKAHR---INNIYKVDLPNSDDALQIFCMYAFGQKTPY 411

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
            GF +L+  V       PL L+V+GSY + MS++EW   + +L+      I+ VLK SYD
Sbjct: 412 DGFYKLARKVTWLVGNFPLGLRVVGSYFREMSKQEWRKEIPRLRARLDGKIESVLKFSYD 471

Query: 383 GLDDEEQNIFLDTACFFKGN-----DQYLVMNFLD-ACRFSAKIGISRLVGKSLVTISNN 436
            L DE++++FL  ACFF        + +L   FLD A RF        L  KSL++I++N
Sbjct: 472 ALCDEDKDLFLHIACFFNHESIEKLEDFLGKTFLDIAQRFHV------LAEKSLISINSN 525

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS---LPTGINLD---- 489
            + MHD L ++G EIVR++S+++PG+R  L    DI +VL ++T+      GI LD    
Sbjct: 526 FVEMHDSLAQLGKEIVRKQSVREPGQRQFLVDARDISEVLADDTAGGRSVIGIYLDLHRN 585

Query: 490 ----SLKELYLGGCSNLK---------RFPEISC-------------------------- 510
               ++ E    G SNL+          FP I C                          
Sbjct: 586 DDVFNISEKAFEGMSNLQFLRVKNFGNLFPAIVCLPHCLTYISRKLRLLDWMYFPMTCFP 645

Query: 511 ---NIE---DLDLKETAIEELPSSI--------------GNLSRLVD---------LDLT 541
              N E   +L++  + +E+L   I               NL  L D         L+L 
Sbjct: 646 SKFNPEFLVELNMWGSKLEKLWEEIQPLRNLKRMDLFSSKNLKELPDLSSATNLEVLNLN 705

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
            CS L  +   + N   L +L LSGC  L +LP  IGN  +L+ ++ +  ++  ++PSS+
Sbjct: 706 GCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLVELPSSI 765

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSS----IHARHCTSLKTLSNS 643
              + L +L L  C  L+ LP      +    +H   C+SLK L +S
Sbjct: 766 GNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSS 812



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 98/177 (55%), Gaps = 9/177 (5%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD----LKETAIEELPSSIGNLSRLV 536
           LP+ I N  +LKEL L  CS+LK  P    N  +L     +  ++++ELPSSIGN + L 
Sbjct: 761 LPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNLK 820

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEK 595
           +L LT CS L  + S + N  +L +L L+GC  L +LP  IG   +L+ LNL       +
Sbjct: 821 ELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVE 880

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSSTLLTR 649
           +PS +  L KLS+LRL+ CK+LQ LP    L   + +    C  LKT    ST + R
Sbjct: 881 LPSFIGNLHKLSELRLRGCKKLQVLPTNINLEFLNELDLTDCILLKTFPVISTNIKR 937



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 11/159 (6%)

Query: 474 QVLNEN-----TSLPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETA-IE 523
           +VLN N       LP  I N   L +L L GCS+L   P     + N++ +D      + 
Sbjct: 700 EVLNLNGCSSLVELPFSIGNATKLLKLELSGCSSLLELPSSIGNAINLQTIDFSHCENLV 759

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           ELPSSIGN + L +LDL+ CS LK + S + N  +L++L+L  C  L++LP  IGN  +L
Sbjct: 760 ELPSSIGNATNLKELDLSCCSSLKELPSSIGNCTNLKKLHLICCSSLKELPSSIGNCTNL 819

Query: 584 EYLNLA-EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           + L+L       K+PSS+     L  L L  C+ L  LP
Sbjct: 820 KELHLTCCSSLIKLPSSIGNAINLEKLILAGCESLVELP 858



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 9/135 (6%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKE-TAIEELPSSIGNLSRLV 536
           LP+ I N  +L++L L GC +L   P     + N++ L+L   + + ELPS IGNL +L 
Sbjct: 833 LPSSIGNAINLEKLILAGCESLVELPSFIGKATNLKILNLGYLSCLVELPSFIGNLHKLS 892

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
           +L L  C  L+ + + + NL+ L  L+L+ C+ L+  P    N++ L   +L     E++
Sbjct: 893 ELRLRGCKKLQVLPTNI-NLEFLNELDLTDCILLKTFPVISTNIKRL---HLRGTQIEEV 948

Query: 597 PSSMKQLSKLSDLRL 611
           PSS++   +L DL++
Sbjct: 949 PSSLRSWPRLEDLQM 963


>gi|356561383|ref|XP_003548961.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1003

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 260/720 (36%), Positives = 365/720 (50%), Gaps = 128/720 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRGKD R NF  HL  +L +  I TFIDDK L RG EI+P+L +AI+ S+I+I+
Sbjct: 19  YDVFLSFRGKDTRQNFTGHLYNSLFKNGILTFIDDKGLRRGEEITPALLNAIKNSRIAII 78

Query: 75  IFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSDA-----GYCPSL------ 122
           +FSE YASS +CL+ELV ILES K + G+ + P+FY VDPS        Y  +L      
Sbjct: 79  VFSEDYASSTYCLDELVTILESFKEEEGRSIYPIFYYVDPSQVRHQTGTYSDALAKHEER 138

Query: 123 ----------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                                 GW   F     E   I   V +IS+K+ D  P    D+
Sbjct: 139 FQYDIDKVQQWRQALYQAANLSGWH--FHGSQPEYKFILKIVKEISEKI-DCVPLHVADK 195

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            +G+E  +  ++S L    ++ + +GI+GIGGIGKTTIA A+Y+   S FEG  F+ +IR
Sbjct: 196 PIGLEYAVLAVKS-LFGLESDVSMIGIYGIGGIGKTTIARAVYNMSFSKFEGICFLPDIR 254

Query: 221 DESEKVGGLANI-----------------HLN----FERRRLSRMKVLIVFYDLTDLKQI 259
           +++    GL  +                 H+N      ++RL + KVL++  D+  L+Q+
Sbjct: 255 EKAINKHGLVELQEMLLSETLKEKDIKVGHVNKGIQIIKQRLQQKKVLLILDDVDKLEQL 314

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L G+ D F  GS +IITTRD  LL  H    V  ++EVK L+   SL LF  +AF  N
Sbjct: 315 KVLAGQYDWFGSGSIIIITTRDKHLLATHE---VVKLYEVKPLNDEKSLELFDWHAFKNN 371

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                ++ +SN  + YA G+PLAL+V+GS L G S  E  SA++K +R+PH  I ++ KV
Sbjct: 372 KTDPSYVTISNRAVSYACGLPLALEVIGSDLFGKSLNECNSALDKYERIPHEKIHEIFKV 431

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKI 438
           SYDGL++ E+ IFLD ACF        V   L A  F  + G+  LV KSLV I ++  +
Sbjct: 432 SYDGLEENEKGIFLDIACFLNTFKVSYVTQMLHAHGFHPEDGLRVLVDKSLVKIDASGFV 491

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGG 498
            MHDL+++ G EIVRQES  +PG+RSRLW  EDI  VL ENT        D ++ + L G
Sbjct: 492 RMHDLIRDTGIEIVRQESTVEPGRRSRLWFKEDIVHVLEENT------GTDKIEFIKLEG 545

Query: 499 CSNLK-----------------------------------RFPEISCN-----IEDLDLK 518
            +N++                                   RF + SC        D + K
Sbjct: 546 YNNIQVQWNGKAFQKMKNLRILIIENTTFSTGPEHLPNSLRFLDWSCYPSPSLPSDFNPK 605

Query: 519 ETAIEELPSSIGNL-----------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
              I ++P S   +                  +L+ L    CS LK + +    L SL  
Sbjct: 606 RVEILKMPESCLKIFQPHKMLESLSIINFKGCKLLTLSAKGCSKLK-ILAHCIMLTSLEI 664

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L+L  CL LE  PE +  +E +  + L       +P S+  L  L  L L+ CKRL  LP
Sbjct: 665 LDLGDCLCLEGFPEVLVKMEKIREICLDNTAIGTLPFSIGNLVGLELLSLEQCKRLIQLP 724


>gi|357462269|ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 1743

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 271/708 (38%), Positives = 378/708 (53%), Gaps = 87/708 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+ VFLSFRG+D R  F  HL AAL R+ I TF DD+ L RG  IS  L  AIE S  ++
Sbjct: 11  KYHVFLSFRGEDTRLGFTDHLYAALVRKSIITFRDDEELARGEVISQKLLLAIEESLSAV 70

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
           +I S+ YA+S WCL+ELVKILESK   GQ V PVFY VDPSD       +  +       
Sbjct: 71  LIISKNYANSAWCLDELVKILESKRLLGQQVFPVFYGVDPSDVRNQRGSFAEAFKKHEEK 130

Query: 124 ----------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W           G       E+ LIE  +  + K+L   FPS N D LV 
Sbjct: 131 FSESKEKVQKWRDALREVANLSGWDSKDQHETKLIEEVIAQVWKRLELKFPSYN-DGLVA 189

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++  ++E+ S L  G  + + +GIWG+GGIGKTT+ +A++  I S F+ S F+ N+R+ S
Sbjct: 190 IDVRLEELYSTLKLGLEDVHFIGIWGMGGIGKTTLTTALFKKIKSQFDVSCFIANVREVS 249

Query: 224 -EKVGGLANI------HLNFE--------------RRRLSRMKVLIVFYDLTDLKQIDLL 262
            E+   L  +      HLN +              R  LS  KVL+V  D++   Q++ L
Sbjct: 250 GERNQYLQQLQNKILSHLNIKGMVIETLSQGKDSLRNLLSNKKVLLVLDDVSSKSQLENL 309

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G  + F  GSR+I+TTRD  LL +H    +  ++E K L+ ++SL LF   AF ++ P 
Sbjct: 310 AGSQEWFGRGSRIIVTTRDKHLLISH--DVLFEMYESKILNKSESLHLFCEKAFKEDAPK 367

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
            GF+ELS  V++YA G+PLAL+VLGS+L G S  +WE A+ K+K++PH DI   L++SYD
Sbjct: 368 EGFVELSESVVEYARGLPLALEVLGSFLCGRSLSDWEDALIKIKQVPHDDILNKLRISYD 427

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
            L+DE + IFLD ACFFKG  ++ V+  L++C     +GI+ L+ KSL+T     I +HD
Sbjct: 428 MLEDEHKTIFLDIACFFKGWYKHKVIQILESCGLHPTVGINVLIEKSLLTFDGRVIWLHD 487

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS----LKELYL 496
           +L+EM   IV QES  DPG+RSRLW  EDI QVL +N  T +  GI L S    L E + 
Sbjct: 488 MLEEMAKTIVIQESPNDPGRRSRLWSLEDIDQVLKKNKGTEIVQGIVLKSSPSTLYEAHW 547

Query: 497 GGCSNLK----RFPEISCNIE-DLDLK------------ETAIEELPSSIGNLSRLVDLD 539
              +  K    R   I C++   L LK               +  LP  I  L  LV L 
Sbjct: 548 DPEAFTKMGNLRLLIILCDLHLSLGLKCLSSSLKVLVWWGYPLNSLPVGI-QLDELVHLQ 606

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIP 597
           + N S +K + +       L+ ++LS    L + P   G  NLE L Y N   K  E + 
Sbjct: 607 MIN-SKIKQLWNGNEYYGKLKVIDLSNSKDLRQTPNVSGIPNLEEL-YFNDCIKLVE-VH 663

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSN 642
            S++Q  KL  L L  C  L+  P   E+     +   +C+++K L +
Sbjct: 664 QSIRQHKKLRILSLMGCVDLKIFPKKLEMFSLKMLFLSYCSNIKRLPD 711



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/280 (38%), Positives = 149/280 (53%), Gaps = 42/280 (15%)

Query: 15   KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
            K+ VFLSFRG+D R  F  HL A+L R+ I TF DD+ L RG  IS  L  AIE S  +I
Sbjct: 1351 KYHVFLSFRGEDTRLGFTDHLYASLVRKSIITFRDDEELARGEVISQKLLHAIEESLSAI 1410

Query: 74   VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------ 122
            VI S+ YA S WCL+ELVKILESK   GQ V P+FY VDPSD       +  +       
Sbjct: 1411 VIISKNYADSAWCLDELVKILESKRLLGQQVFPIFYGVDPSDVRNQRGSFAEAFKKHEEK 1470

Query: 123  -------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                                + G       E+ LIE  +  + K+L   FPS N D LV 
Sbjct: 1471 FSESKEKVQRWRDALREVANFSGWDSKDQHETKLIEEVIAQVWKRLELKFPSYN-DGLVA 1529

Query: 164  VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
            ++  ++E+ S L  G  + + +GIWG+GGIGKTT+ +A++  I S F+ S F+ N+R+ +
Sbjct: 1530 IDVRLEELYSTLKLGLEDVHFIGIWGMGGIGKTTLTTALFKKIKSQFDVSCFITNVREGT 1589

Query: 224  EKVGG---------LANIHLNFER-RRLSRMKVLIVFYDL 253
            E V G         L   H + E   ++  +++LI+  DL
Sbjct: 1590 ELVQGIVLKSSPSTLYEAHWDPEAFSKMGNLRLLIILCDL 1629



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 80/172 (46%), Gaps = 31/172 (18%)

Query: 483 PTGI-NLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVDL 538
           P  I NL SL+ L + GCS +   P+    I   ED+DL  TAI +L  S+  L  L  L
Sbjct: 734 PNSICNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRL 793

Query: 539 DLTNCSGLKSVSSR-------------------------LCNLKSLRRLNLSGC-LKLEK 572
            L +C    + SS                          L  L SL  L+LS C L    
Sbjct: 794 SLRSCRDPATNSSWNFHLPFGKKFSFFPAQTTSLTLPPFLSGLSSLTELDLSDCNLTDSS 853

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSS-MKQLSKLSDLRLQNCKRLQSLPEL 623
           +P +I  L SLE L L+  +F  +P+  +  LSKL  L L++C +LQSLP L
Sbjct: 854 IPHDIDCLSSLERLILSGNNFVCLPTHYISNLSKLRYLELEDCPQLQSLPML 905



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 28/138 (20%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            P  + + SLK L+L  CSN+KR P+    ++C  E   L    +  LP+SI        
Sbjct: 686 FPKKLEMFSLKMLFLSYCSNIKRLPDFGKNMTCITELNLLNCENLLSLPNSI-------- 737

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
                           CNLKSLR LN+SGC K+  LP+ I  + +LE ++L+      + 
Sbjct: 738 ----------------CNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLD 781

Query: 598 SSMKQLSKLSDLRLQNCK 615
            S+ QL  L  L L++C+
Sbjct: 782 PSLLQLGNLKRLSLRSCR 799


>gi|105923326|gb|ABF81471.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1368

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 251/723 (34%), Positives = 369/723 (51%), Gaps = 131/723 (18%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I TF DD +L RG EIS  L  AI+ SK
Sbjct: 117 PQWAYDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISQHLLEAIQESK 176

Query: 71  ISIVIFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
           I IV+FS+GYASSRWCL+ELV+IL+ K  K GQI +P+FY +DPSD       +  +   
Sbjct: 177 ICIVVFSKGYASSRWCLDELVEILKCKYRKTGQIALPIFYDIDPSDVRKQTGSFAEAFVK 236

Query: 123 -----------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNK 158
                                  GW  + D+    E+  I+  + ++  KLS   P D  
Sbjct: 237 HEERSEEKVKEWREALEEAGNLSGW-NLKDMTNGHEAKFIQHIIKEVWNKLS---PKDMN 292

Query: 159 --DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
                VG++ ++ EI   + +G+ +   VGI G+ GIGKTTIA  ++  +   FEGS F+
Sbjct: 293 VGTHPVGIDPLVNEIRDFVSNGTEKVCIVGIHGMPGIGKTTIAKEVFDKLCDEFEGSSFL 352

Query: 217 QNIRDESE-KVGGLANIHL-------------NFER------RRLSRMKVLIVFYDLTDL 256
            N++++SE K   L    L             N +R       RL   +VL+V  D+   
Sbjct: 353 LNVKEKSESKDMVLLQKQLLHDILRQNTEKINNVDRGKVLIKERLPHKRVLVVVDDVARP 412

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q+  L+G      PGSRVIITTRD  LL           ++V+EL+ ++SL LF R+AF
Sbjct: 413 DQLLDLMGEPSWLGPGSRVIITTRDESLLLE-----ADQRYQVQELNRDNSLQLFCRHAF 467

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
               PA  ++ELSN V++Y  G+PLAL+VLGS L G ++  WES +++L++ P+ +IQK 
Sbjct: 468 RDTKPAKDYVELSNDVVEYCGGLPLALKVLGSCLYGKNQARWESVIDRLRKFPNSEIQKK 527

Query: 377 LKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTIS 434
           L++S+D LD+   +N FLD ACFF G  +  V   L+    ++ +     L+ +SL+ + 
Sbjct: 528 LRISFDTLDESTLKNTFLDIACFFIGRKKEYVAKVLEGRYGYNPEDDFGTLIERSLIKVD 587

Query: 435 NN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL----------------- 476
           ++  I MHDLL+ MG EIV++ES ++P +RSR+W  ED + VL                 
Sbjct: 588 DSGTIGMHDLLRGMGREIVKEESPENPAQRSRIWSQEDAWIVLKMQMGTEVVKGLTLDVR 647

Query: 477 -NENTSLPTG--INLDSLKELYLGGCSNLKRFPEIS----------CNIEDL-------- 515
            +E+ SL TG    +  LK L + G      F  +S          C +E L        
Sbjct: 648 RSEDKSLSTGSFTKMKLLKLLQINGVELTGSFERLSKVLTWICWLECPLEFLPSDFTLDY 707

Query: 516 ----DLKETAIEELPSSIGNLSRLVDLDLT----------------------NCSGLKSV 549
               D++ + I EL      L++L  LDL+                       CS L  +
Sbjct: 708 LVVIDMRYSNIRELWKEKKILNKLKILDLSYSKNLVKTPNMHSLNLEKLLLEGCSSLVEI 767

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
              + + KSL  LN+SGC +L+KLPE +G++E    L     + E+  SS++ L  +  L
Sbjct: 768 HQCIGHSKSLVSLNISGCSQLQKLPECMGDIECFTELLADGINNEQFLSSVEHLRCVRKL 827

Query: 610 RLQ 612
            L+
Sbjct: 828 SLR 830



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 26/173 (15%)

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDL-DLKETAI--EELPSSIGNLSRLVDLDLT----- 541
           SL  L + GCS L++ PE   +IE   +L    I  E+  SS+ +L  +  L L      
Sbjct: 776 SLVSLNISGCSQLQKLPECMGDIECFTELLADGINNEQFLSSVEHLRCVRKLSLRGHWDW 835

Query: 542 --NCSGLKSVSSR------LCNLKSLRRLNLSGCLKL-----EKLPEEI--GNLESLEYL 586
             N     S +S       L    ++ RL   G LKL     E+    +  G L SLE L
Sbjct: 836 NWNLPYWPSPNSSWIPAFLLTPTSTIWRL--LGKLKLGYGLSERATNSVDFGGLSSLEEL 893

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
           +L+  +F  +PS +  LSKL  L +Q C+ L S+PELP     + A  C S++
Sbjct: 894 DLSGNNFFSLPSGIGILSKLRLLTVQECRNLVSIPELPSNLEHLDAFGCQSMQ 946


>gi|359487015|ref|XP_003633506.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1610

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 214/516 (41%), Positives = 297/516 (57%), Gaps = 61/516 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +++VFLSFRG+D R NF  HL AAL ++ I TF  D   +G  I P+   AIE S+  +V
Sbjct: 224 EYEVFLSFRGQDTRQNFTDHLYAALSQKGIRTFRMDH-TKGEMILPTTLRAIEMSRCFLV 282

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSL------- 122
           I S+ YA S+WCL+EL KI+ES+ + G++V PVFY V+PSD       Y  +L       
Sbjct: 283 ILSKNYAHSKWCLDELKKIMESRRQMGKLVFPVFYHVNPSDVRNQGESYGEALANHERKI 342

Query: 123 ---------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                          G +  + I    ES  IE     I  K S      +K+ L+G++ 
Sbjct: 343 PLENTQRMRAALREVGNLSGWHIQNGFESDFIEDITRVILMKFSQKLLQVDKN-LIGMDY 401

Query: 167 IIKEIES---QLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
            ++++E    Q++   S     VGI+G GGIGKTT+A  +Y+ I + F  + F+ N+R++
Sbjct: 402 RLEDMEEIFPQIIDPLSNNVRMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVRED 461

Query: 223 SEKVGGL----------------------ANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           S+  G L                        IH+   + RL   KVL+V  D+ DL Q++
Sbjct: 462 SKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMI--KDRLCFKKVLLVLDDVDDLNQLE 519

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G  + F PGSR+I+TTRD  LL+ H    +  ++E K+L + +++ LF  NAF QNH
Sbjct: 520 ALAGDHNWFGPGSRIIVTTRDKHLLEVHE---MDALYEAKKLDHKEAVELFCWNAFKQNH 576

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   +  LSN V+ Y NG+PL L+VLG +L G +  +WES + KL+R P+ +IQ+VLK S
Sbjct: 577 PKEDYKTLSNSVVHYVNGLPLGLKVLGCFLYGKTICQWESELQKLQREPNQEIQRVLKRS 636

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           YD LD  +Q IFLD ACFF G D+  V   LDAC F AK GI  L  K  +TI +NKI M
Sbjct: 637 YDVLDYTQQQIFLDVACFFNGEDKDFVTRILDACNFYAKSGIGVLGDKCFITILDNKIWM 696

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           HDLLQ+MG +IVRQE  KDPGK SRL +PE + +VL
Sbjct: 697 HDLLQQMGRDIVRQECPKDPGKWSRLCYPEVVNRVL 732



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 1/102 (0%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF G+D RHNF  HL  AL ++ I TF D ++L RG EI+  L  AIE S+I +V
Sbjct: 26  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDHEELRRGEEIAAELLKAIEESRICVV 85

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           I S+ YA SRWCL+ELVKI+  K   GQ+V+P+FY VDPS+ 
Sbjct: 86  ILSKNYARSRWCLDELVKIMGWKKCMGQLVLPIFYQVDPSNV 127



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 1/110 (0%)

Query: 19   FLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIVIFS 77
            F SFRG+D  ++F +HL   LC + I TFID DKL RG+ I+ +L +AIE SK S+++ S
Sbjct: 1500 FRSFRGEDTCNSFTTHLYKELCTKGINTFIDNDKLERGDVIASTLVAAIENSKFSVIVLS 1559

Query: 78   EGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGI 127
            E YASSRWCL ELVKILE     GQ V+P+FY VDPS   Y     W  I
Sbjct: 1560 ENYASSRWCLEELVKILECIRTKGQRVLPIFYNVDPSHIRYHKRKFWRSI 1609



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 98/162 (60%), Gaps = 10/162 (6%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
             P+ I++ +L+ L    CS LK+FP I  N+E   +L L  TAIEELPSSIG+L+ LV L
Sbjct: 907  FPSIIDMKALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLL 966

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            DL  C  LKS+ + +C LKSL  L+LSGC KLE  PE   N+++L+ L L     E +P 
Sbjct: 967  DLKWCKNLKSLPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPL 1026

Query: 599  SMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            S+++L  L  L L+ CK L SL    C       + TSL+TL
Sbjct: 1027 SIERLKGLILLNLRKCKNLVSLSNGMC-------NLTSLETL 1061



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 79/141 (56%), Gaps = 4/141 (2%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLPT I  L SL+ L L GCS L+ FPE++ N+++L    L  T IE LP SI  L  L+
Sbjct: 976  SLPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPLSIERLKGLI 1035

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L+L  C  L S+S+ +CNL SL  L +SGC +L  LP  +G+L+ L  L+       + 
Sbjct: 1036 LLNLRKCKNLVSLSNGMCNLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQP 1095

Query: 597  PSSMKQLSKLSDLRLQNCKRL 617
            P S+  L  L  L    CK L
Sbjct: 1096 PDSIVLLRNLQVLIYPGCKIL 1116



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 95/213 (44%), Gaps = 34/213 (15%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRL 535
             SL  G+ NL SL+ L + GCS L   P    +++    L    TAI + P SI  L  L
Sbjct: 1046 VSLSNGMCNLTSLETLIVSGCSQLNNLPRNLGSLQRLAQLHADGTAIAQPPDSIVLLRNL 1105

Query: 536  VDLDLTNCSGLKSVS-----------SRLCNLKSLR------------RLNLSGCLKLE- 571
              L    C  L   S               N   LR             L++S C  +E 
Sbjct: 1106 QVLIYPGCKILAPNSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEG 1165

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
             +P  I +L SL+ L+L+  +F  IP+ + +L+ L DLRL  C+ L  +PELP     I 
Sbjct: 1166 AIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDID 1225

Query: 631  ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
            A +CT+L  L  SS++ T        F F NCS
Sbjct: 1226 AHNCTAL--LPGSSSVSTLQGLQ---FLFYNCS 1253



 Score = 45.4 bits (106), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 30/173 (17%)

Query: 481 SLPTGINLDSLKELYLGGC-SNLKRFPEISCNIEDLDLKETAIE----ELPSSIGNLSRL 535
           SLP G   + L EL +  C S+LKR  E    +E L+    +      E+P  I +   L
Sbjct: 812 SLPLGFYAEDLVELDM--CYSSLKRLWEGDLLLEKLNTIRVSCSQHLIEIPDIIVSAPNL 869

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK-----------------------LEK 572
             L L  CS L  V   +  L  L  LNL  C K                       L+K
Sbjct: 870 EKLILDGCSSLLEVHPSIGKLNKLILLNLKNCKKLICFPSIIDMKALEILNFSSCSGLKK 929

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            P   GN+E+L  L LA    E++PSS+  L+ L  L L+ CK L+SLP   C
Sbjct: 930 FPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLPTSIC 982


>gi|251748502|gb|ACT11053.1| TIR-NB-LRR resistance protein [Arachis diogoi]
          Length = 1095

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 256/826 (30%), Positives = 384/826 (46%), Gaps = 182/826 (22%)

Query: 14  PKHD----VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGS 69
           P HD    VF+ F GKD+R   +SHL  AL +++I TF+D KL +G EIS  L  AIE S
Sbjct: 53  PTHDTKFGVFIGFSGKDIREGLLSHLAKALRQKQIFTFVDTKLEQGGEISQELLQAIEKS 112

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------- 116
            IS+V+FSE YA S W L+ELVKI+E + + GQIV+PVFY V+PS               
Sbjct: 113 LISLVVFSENYAFSTWRLDELVKIMECRREKGQIVLPVFYRVEPSHVRHQKGVFSTAFAK 172

Query: 117 -----GYCPSLGWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                G   +  W   F    +           ++ LIE  +  ++ +L ++    +K  
Sbjct: 173 QERRFGKEKAQTWRSAFQEAANISGFHSAKFGNDAELIEEIIQSVNTRLKNMRQFSSKG- 231

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           L G+   I  +ES L         +GIWG+GG GK T++  +Y+ +   +E   F++N+R
Sbjct: 232 LFGIAKSISRVESLLRQEPESVRVIGIWGMGGFGKITVSEVVYNLLRDEYESVVFLRNVR 291

Query: 221 DESEKVGGL------------ANIHLN-------FERRRLSRMKVLIVFYDLTDLKQIDL 261
           + S + G +             N+ ++       +  +R+ RMKVLIV  D+   +Q ++
Sbjct: 292 EVSLRHGIIYLKNELFSKLLGENLEIDTQNGLPTYVEKRIGRMKVLIVLDDVNQSEQFEI 351

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G    F  GSR+I+TTRD Q+L  +  +     ++V+ L  +++L LF+  AF QN  
Sbjct: 352 LVGTPQSFGSGSRIIVTTRDRQVLAKY--AHANDTYKVEPLESDEALQLFNLIAFQQNEV 409

Query: 322 AAG-FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
               +  L+  V+ +A G+PL L+ LG       +  WES + KL ++P+  +  ++++S
Sbjct: 410 VEKEYRALAERVVDHAKGIPLVLKTLGHLPHEKEKWIWESELEKLGKIPNKKVFDMMRLS 469

Query: 381 YDGLDDEEQNIFLDTACFFKGND---QYLVMNFLDACRFSAKIGISRLVGKSLVTISN-N 436
           YD LD +E+++ LD ACFF G     +YL  + L    F     + RL   S +TIS  +
Sbjct: 470 YDELDRQEKSMLLDIACFFDGMKLKVKYL-ESLLKHGDFPVPAALKRLEDISFITISKED 528

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGIN------- 487
            +TMHD++QEM  EIVRQESI+DPG  SR+W+PEDIYQVL  N+ +     IN       
Sbjct: 529 VVTMHDIVQEMAWEIVRQESIEDPGNYSRIWNPEDIYQVLKNNQGSEAIRSINFSYSKAT 588

Query: 488 -------------LDSLKELYLGGCSNLKRFPEISCNIED-------------------- 514
                        +  L+ L   G  +L  FPE    +                      
Sbjct: 589 VRNMQLSPQVFSKMSKLRFLDFYGERHLLHFPEGLQQLPSRLRYLRWTYYPLKSLPKKFS 648

Query: 515 ------LDLKETAIEELPSSIGNL-----------------------SRLVDLDLTNCSG 545
                 L+L  + +E+L   I NL                       + L  LD   C  
Sbjct: 649 AEKLVILELPYSQVEKLWYGIQNLVNLKVLKAPYSSQLKEFPDLSKATNLEILDFKYCLR 708

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKL-------------------------------- 573
           L  V   + +L  L  L+LS C +L KL                                
Sbjct: 709 LTRVHPSVFSLNKLETLDLSWCSQLAKLETNAHLKSLRYLSLYHCKRLNKFSVISENMTE 768

Query: 574 -----------PEEIGNLESLEYLNLAEKDFEKIPS-SMKQLSKLSDLRLQNCKRLQSLP 621
                      P   G    LE L+LA  + +K+P+ SMK L+ L  L + +CK LQ+LP
Sbjct: 769 LDLRHTSIRELPSSFGCQSKLEKLHLANSEVKKMPADSMKLLTSLKYLDISDCKNLQTLP 828

Query: 622 ELPCG-SSIHARHCTSLKTL--SNSSTLLTRSSKH---WDIFNFSN 661
           ELP    ++ A +CTSLK +   N+S  L  + K    W+     N
Sbjct: 829 ELPLSIETLDADNCTSLKAVLFPNASEQLKENKKKAVFWNCLKLEN 874


>gi|27764547|gb|AAO23077.1| R 8 protein [Glycine max]
          Length = 892

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 260/728 (35%), Positives = 380/728 (52%), Gaps = 108/728 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+++ S+       +DVFLSF G+D R  F  +L  ALC   I TFIDD+ L RG+EI 
Sbjct: 1   MAATTRSLAY----NYDVFLSFTGQDTRQGFTGYLYKALCDRGIYTFIDDQELRRGDEIK 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P+LS+AI+ S+I+I + S+ YASS +CL+ELV IL  K++ G +V+PVFY VDPS     
Sbjct: 57  PALSNAIQESRIAITVLSQNYASSSFCLDELVTILHCKSQ-GLLVIPVFYKVDPSHVRHQ 115

Query: 115 DAGYCPSLG---------------W-MGIFDIP-----------TSESVLIEGNVNDISK 147
              Y  ++                W M +  +            + E   I   V +IS+
Sbjct: 116 KGSYGEAMAKHQKRFKANKEKLQKWRMALHQVADLSGYHFKDGDSYEYEFIGSIVEEISR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           K S        D  VG+ES + E+   L  GS +  + +GI G+GG+GKTT+A A+++ I
Sbjct: 176 KFSRA-SLHVADYPVGLESEVTEVMKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I L       +  + RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  ++GR D F PGSRVIITTRD  LLK H   R    +EVK L+ + 
Sbjct: 295 LLILDDVDKRQQLKAIVGRPDWFGPGSRVIITTRDKHLLKYHEVERT---YEVKVLNQSA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L + NAF +      + ++ N V+ YA+G+PLAL+V+GS L   +  EWESA+   K
Sbjct: 352 ALQLLTWNAFKREKIDPSYEDVLNRVVTYASGLPLALEVIGSNLFEKTVAEWESAMEHYK 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISRL 425
           R+P  +IQ++LKVS+D L +E++N+FLD AC FKG +   V N L D      K  I  L
Sbjct: 412 RIPSDEIQEILKVSFDALGEEQKNVFLDIACCFKGYEWTEVDNILRDLYGNCTKHHIGVL 471

Query: 426 VGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP- 483
           V KSLV +S  + + MHD++Q+MG EI RQ S ++PGK  RL  P+DI QVL +NT    
Sbjct: 472 VEKSLVKVSCCDTVEMHDMIQDMGREIERQRSPEEPGKCKRLLLPKDIIQVLKDNTGTSK 531

Query: 484 ----------------------TGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLK 518
                                   + + +LK L +  C   K    FPE    +  L+  
Sbjct: 532 IEIICLDFSISDKEETVEWNENAFMKMKNLKILIIRNCKFSKGPNYFPE---GLRVLEWH 588

Query: 519 ETAIEELPSSIGNLS----RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
                 LPS+   ++    +L D  +T+     S       L  L  LN   C  L K+P
Sbjct: 589 RYPSNCLPSNFDPINLVICKLPDSSITSFEFHGSSK----KLGHLTVLNFDRCEFLTKIP 644

Query: 575 E--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIH 630
           +  ++ NL+ L + N  E     +  S+  L+KL  L    C++L S P L   S  +++
Sbjct: 645 DVSDLPNLKELSF-NWCE-SLVAVDDSIGFLNKLKTLSAYGCRKLTSFPPLNLTSLETLN 702

Query: 631 ARHCTSLK 638
              C+SL+
Sbjct: 703 LGGCSSLE 710



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 93/200 (46%), Gaps = 35/200 (17%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  +NL SL+ L LGGCS+L+ FPEI     NI  L L +  I+ELP S  NL  L+
Sbjct: 688 TSFPP-LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIGLL 746

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLS-GCLKLEKLPEE------IGNLESLE----- 584
            L L +C G+  +   L  +  L    ++  C + + +  E      +G++ S E     
Sbjct: 747 FLWLDSC-GIVQLRCSLATMPKLCEFCITDSCNRWQWVESEEGEEKVVGSILSFEATDCN 805

Query: 585 -----------------YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG- 626
                            YLNL   +F  +P   K+L  L+ L + +CK LQ +  LP   
Sbjct: 806 LCDDFFFIGSKRFAHVGYLNLPGNNFTILPEFFKELQFLTTLVVHDCKHLQEIRGLPPNL 865

Query: 627 SSIHARHCTSLKTLSNSSTL 646
               AR+C SL + S S  L
Sbjct: 866 KHFDARNCASLTSSSKSMLL 885



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  L  L    C  L + P++S   N+++L      ++  +  SIG L++L  L    C 
Sbjct: 626 LGHLTVLNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDSIGFLNKLKTLSAYGCR 685

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L S      NL SL  LNL GC  LE  PE +G ++++  L L +   +++P S + L 
Sbjct: 686 KLTSFPP--LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLI 743

Query: 605 KLSDLRLQNCKRLQ---SLPELP 624
            L  L L +C  +Q   SL  +P
Sbjct: 744 GLLFLWLDSCGIVQLRCSLATMP 766


>gi|359493549|ref|XP_002268091.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 927

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 254/686 (37%), Positives = 365/686 (53%), Gaps = 88/686 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG+D R  F  HL A L    I TF DD+ L +G +I+  LS AIE SKI I+
Sbjct: 21  YHVFLSFRGEDTRQTFTGHLYANLVARGIHTFRDDEELEKGGDIASDLSRAIEESKIFII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           IFS+ YA S+WCLNELVKI++   +   +V+PVFY V+P+D       +  +        
Sbjct: 81  IFSKHYADSKWCLNELVKIIDCMTEKKSVVLPVFYHVEPTDVRNQGGSFKDAFLEHAKDA 140

Query: 123 ---------GWMGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W     I            SE+  I+    DI+ +L+   P D    +VG
Sbjct: 141 DQEKKKKIETWKNALKIAANLSGFHLQNQSEAEFIQRIYEDIAIRLNRT-PLDMGYNIVG 199

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++  + +++S +     E   VGI+GIGGIGKTTI+ AIY++ISS F+G  F+ N+  + 
Sbjct: 200 MDFHLTQLKSLIKVELDEVLMVGIYGIGGIGKTTISKAIYNDISSQFDGCSFLGNVGGKC 259

Query: 224 E-----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           E                 KV    NI   +N  + RL   +VLIV  D+ +  Q++ L G
Sbjct: 260 EDGLLKLQKTLLQDIVKCKVPKFNNISQGINVIKERLRSKRVLIVLDDVDNYMQLENLAG 319

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           +   +   S +IITT+D  LL  H    V  ++EV++L++  S+ LF+  AF QN P  G
Sbjct: 320 KHGWYGAKSIIIITTKDKHLLDQHE---VKALYEVQKLNHEKSVELFNWWAFKQNTPKTG 376

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F  LSN V++Y +G+P+AL+VLG +L   S  EWES ++K+K++P   +Q VLKVSYD L
Sbjct: 377 FESLSNSVVEYTHGLPVALKVLGGFLYEKSINEWESELHKVKKIPDEIVQNVLKVSYDKL 436

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           D   Q IFLD ACFF+G D+  V   L +    A +GI  L  K L+TIS NK+ MHDL+
Sbjct: 437 DHTCQEIFLDIACFFRGKDKDFVSRILGS---YAMMGIKVLNDKCLLTISENKLDMHDLV 493

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------------SLPTGINLDSLK 492
           Q+MG EIVRQE +K+PG RSRLW   D+  VL  NT            SL + I+ +S  
Sbjct: 494 QQMGQEIVRQECLKEPGNRSRLWDCNDVDSVLTRNTGTQAIEGLFVQGSLASQISTNSFT 553

Query: 493 EL-------------YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           +L             +      LK        +     K   +E LP++  +   LV+L+
Sbjct: 554 KLNRLRLLKVYYPHMWKKDFKALKNLDFPYFELRYFHFKGYPLESLPTNF-HAKNLVELN 612

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L + S +K +      L +L+ +NLS   KL ++  +   + +LE L L  K  E++PSS
Sbjct: 613 LKH-SSIKQLWQGNEILDNLKVINLSYSEKLVEIS-DFSRVTNLEILIL--KGIEELPSS 668

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELPC 625
           + +L  L  L L+ C  L SLP+  C
Sbjct: 669 IGRLKALKHLNLKCCAELVSLPDSIC 694



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           LD+LK + L     L    + S   N+E L LK   IEELPSSIG L  L  L+L  C+ 
Sbjct: 628 LDNLKVINLSYSEKLVEISDFSRVTNLEILILK--GIEELPSSIGRLKALKHLNLKCCAE 685

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           L S+   +C  ++L++L++  C KLE++
Sbjct: 686 LVSLPDSIC--RALKKLDVQKCPKLERV 711



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 19/148 (12%)

Query: 509 SCNIEDLDLKETAIEELPSSIGNLS---RLVDLDLTNCSGLKSVSSRLCNL--------- 556
           SC+ +      +A+E L  S+GN S   R +  D+   S LKSV  R CNL         
Sbjct: 760 SCSRDYRGFHLSALEVL--SVGNFSPIQRRILSDIFRQSSLKSVCLRNCNLMEEGVPSDI 817

Query: 557 ---KSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
               SL  L+LS C   E ++   I ++ SL+ L+L    F  IP+++ QLSKL  L L 
Sbjct: 818 WNLSSLVNLSLSNCSLTEGEILNHICHVSSLQNLSLDGNHFSSIPANIIQLSKLRTLGLY 877

Query: 613 NCKRLQSLPELPCG-SSIHARHCTSLKT 639
           +C++L  +PELP    ++    C  L+T
Sbjct: 878 HCQKLLQIPELPPSLRALDVHDCPCLET 905


>gi|357449971|ref|XP_003595262.1| Heat shock protein [Medicago truncatula]
 gi|355484310|gb|AES65513.1| Heat shock protein [Medicago truncatula]
          Length = 1541

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 259/709 (36%), Positives = 384/709 (54%), Gaps = 97/709 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG D R+NF   L   L +  I TF D+ ++ +G EI+P+L  AI+ S+I IV
Sbjct: 14  YDVFISFRGIDTRNNFTRDLYDILYQNGIHTFFDEEQIQKGEEITPALFQAIQQSRIFIV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FS  YASS +CLNELV IL+  N +G++++PVFY VDPS        Y  +LG      
Sbjct: 74  VFSNNYASSTFCLNELVVILDCSNTHGRLLLPVFYDVDPSQVRHQSGAYGEALGKHEKRF 133

Query: 124 ---------WMGIFDIPT------------SESVLIEGNVNDISKKL--SDLFPSDNKDQ 160
                    W                    SE   I   V +++KK+  + L  +DN   
Sbjct: 134 CDDKDKVQKWRDALCQAANVSGWHFQHGSQSEYKFIGNIVEEVTKKINRTTLHVADNP-- 191

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            V +ES + E+ S L SG  +  N VGI+GIGG+GK+T+A A+Y++IS  F+G  F+  I
Sbjct: 192 -VALESPMLEVASLLDSGPEKGTNMVGIYGIGGVGKSTLARAVYNHISDQFDGVCFLAGI 250

Query: 220 RDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQ 258
           R ES    GLA +                      ++  +RRL R KVL+V  D+  +KQ
Sbjct: 251 R-ESAINHGLAQLQETLLSEILGEEDIRIRDVYRGISIIKRRLQRKKVLLVLDDVDKVKQ 309

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           I +L G  D F PGS++++TTRD  LL  H    + +++EVK+L++  SL LF+ +AF  
Sbjct: 310 IQVLAGGHDWFGPGSKIVVTTRDKHLLAIHE---ILNLYEVKQLNHEKSLDLFNWHAFRN 366

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
                 + ++SN  + YA+G+PLAL+V+GS+L G S + W+S+++K +R+ H +I ++LK
Sbjct: 367 RKMDPCYSDMSNRAVSYASGLPLALEVIGSHLFGKSLDVWKSSLDKYERVLHKEIHEILK 426

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNK 437
           VSYD LDD+++ IFLD ACFF   +       L    FSA+ GI  L  KSL+ I +N  
Sbjct: 427 VSYDDLDDDQKGIFLDIACFFNSYEMSYAKELLYLHGFSAENGIQVLTDKSLIKIDANGC 486

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKE 493
           + MHDL+Q+MG EIVRQES  +PG+RSRLW+ +DI  VL  N    T     INL + KE
Sbjct: 487 VRMHDLVQDMGREIVRQESTVEPGRRSRLWYDDDIVHVLETNMGTDTIEVIIINLCNDKE 546

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKS----- 548
           +   G    K F ++  N++ L ++       P  + N  R++D +      L +     
Sbjct: 547 VQWSG----KAFTKMK-NLKILIIRSARFSRGPQKLPNSLRVLDWNGYPSQSLPADFNPK 601

Query: 549 ------------VSSRLCNL-KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
                       VS +L  + +SL  L+  GC  L +LP  +  L +L  L L +  +  
Sbjct: 602 NLMILSLPESCLVSFKLLKVFESLSFLDFEGCKLLTELP-SLSGLVNLGALCLDDCTNLI 660

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTL 640
           +I  S+  L+KL  L  Q CK+L+ L     LP   ++  R C+ LK+ 
Sbjct: 661 RIHKSIGFLNKLVLLSSQRCKQLELLVPNINLPSLETLDIRGCSRLKSF 709



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            +SL  L   GC  L   P +S   N+  L L + T +  +  SIG L++LV L    C 
Sbjct: 622 FESLSFLDFEGCKLLTELPSLSGLVNLGALCLDDCTNLIRIHKSIGFLNKLVLLSSQRCK 681

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ +   + NL SL  L++ GC +L+  PE +G +E++ Y+ L +    K+P S++ L 
Sbjct: 682 QLELLVPNI-NLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLV 740

Query: 605 KLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSN 642
            L  L L+ C  L  LP+    LP    I A  C   +   +
Sbjct: 741 GLRQLFLRECMSLTQLPDSIRILPKLEIITAYGCRGFRLFED 782



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDL 538
           L   INL SL+ L + GCS LK FPE+     NI  + L +T+I +LP SI NL  L  L
Sbjct: 686 LVPNINLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQL 745

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGC--LKLEKLPEEIGN 579
            L  C  L  +   +  L  L  +   GC   +L +  E++G+
Sbjct: 746 FLRECMSLTQLPDSIRILPKLEIITAYGCRGFRLFEDKEKVGS 788


>gi|224145716|ref|XP_002325741.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|224145719|ref|XP_002325742.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862616|gb|EEF00123.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862617|gb|EEF00124.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 532

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 204/523 (39%), Positives = 289/523 (55%), Gaps = 65/523 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRGKD R NF  HL  AL +  I TF DD +L RG EISP L  AIEGS+ISIV
Sbjct: 10  YDVFLSFRGKDTRKNFTDHLYTALIQAGIHTFRDDNELPRGEEISPQLVKAIEGSRISIV 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS+ YASSRWCL+ELVKI+E + K  Q+V+P+FY  +PSD       Y  +        
Sbjct: 70  VFSKQYASSRWCLDELVKIVECRQKIDQVVLPIFYDTEPSDVRKQTGSYAKAFDEHEEHF 129

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW    +    E+  I+  V+D++ KL +      K   
Sbjct: 130 KEEMEKVNKWRGALAEAGNLSGWGLNNEANGYEAEFIKRIVSDVACKLGNKTLHVAK-HP 188

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ S ++ I S L     +   VGI GI GIGKTTIA A+++ +   FEGS F+ ++++
Sbjct: 189 VGIYSRVQGIISLLKGAKPDVGIVGIHGIAGIGKTTIAKAVFNKLYFGFEGSSFLLDVKE 248

Query: 222 ESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
            S+K  GL  +                      +N  + RL R K+L+VF D+   +Q++
Sbjct: 249 ISDKPNGLVELQERLLHDILKPNVWKLSNVYEGMNLIKERLHRKKILVVFDDVDKREQLE 308

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G    F  GS +I+ T++  LL       V  ++  KEL  + SL LFS +AF + H
Sbjct: 309 ALMGERCWFGAGSIIIVVTKNKHLLAE---VGVDEMYHAKELDRDQSLQLFSLHAFRETH 365

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           PA  + ELS  V+ Y  G+PLALQ+LGS+L    +  WE  +   K  PH DIQ  L+VS
Sbjct: 366 PAKNYEELSGKVVDYCKGLPLALQILGSHLSIRDKAGWEIDIAHWKNTPHDDIQGKLRVS 425

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA--KIGISRLVGKSLVTI---SN 435
           +D L+ +   IFLD AC+F G D+  V + + A R+    ++    L+G+SL+TI     
Sbjct: 426 FDALNVDTSEIFLDIACYFVGRDKEYVADIVGA-RYDCHPEVAFRTLIGRSLITIDTEKQ 484

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
           N++ MHD+L++MG EI+RQ S   PG  SR+W P+D Y VL++
Sbjct: 485 NRLRMHDILRKMGREIIRQRSRNRPGNCSRIWLPKDAYNVLSK 527


>gi|227438113|gb|ACP30546.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 799

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 252/786 (32%), Positives = 373/786 (47%), Gaps = 177/786 (22%)

Query: 1   MASSSSSINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEIS 59
           MASSSS      HP+ + VF SF G+DVR NF+SH +  L    I+ F D  + R   I 
Sbjct: 1   MASSSS------HPRRYHVFPSFCGEDVRRNFLSHFHKELQLNGIDAFKDGGIKRSRSIW 54

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P L  AI  S++SIV+ S+ Y  S WCL+ELV+I+E K   GQ V+P+FY VDP+D    
Sbjct: 55  PELKQAIWESRVSIVVLSKNYGGSSWCLDELVEIMECKEVSGQTVMPIFYGVDPTDVRKQ 114

Query: 116 ---------------------------------AGYCPSLGWMGIFDIPTSESVLIEGNV 142
                                            AG C S  W        +++V+IE  V
Sbjct: 115 SGDFGKSFDTICHVRTEEERQRWKQALTSVASIAGDCSS-KW-------DNDAVMIERIV 166

Query: 143 NDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAI 202
            ++ ++L+   PS +   LVG+E+ +  + S L   + E   +GIWG  GIGKTTIA A+
Sbjct: 167 TNVLQELNWCTPSKDFKDLVGLEAHVSNLNSMLCLDTNEVKIIGIWGPAGIGKTTIARAL 226

Query: 203 YSNISS---HFEGSYFMQNI--------------------RDESEKVGGLANI-HLNFER 238
           Y+ +SS    F+ + FM+N+                    R  SE       I HL   +
Sbjct: 227 YNQLSSSGDEFQLNLFMENVKGVQMRKELHGYSLKLHLQERFLSEIFNQRTKISHLGVAQ 286

Query: 239 RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFE 298
            RL   K L+V  D+  L+Q++ LI   + F  G+R+I+TT D QLLK H    +  V+E
Sbjct: 287 ERLKNQKALVVLDDVDGLEQLNALIDTTEWFGYGTRIIVTTEDRQLLKAHG---INQVYE 343

Query: 299 VKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEW 358
           V   S  ++  +  R AFG N    GF +L+  V K A  +PL L VLG+ L+G+S+EEW
Sbjct: 344 VGYPSQGEAFKILCRYAFGDNSAPKGFYDLATEVTKLAGDLPLGLSVLGASLRGLSKEEW 403

Query: 359 ESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA 418
            +A+ +L+   +  I+K+L V YDGLD++++ +FL  AC F G     V   L      A
Sbjct: 404 INAIPRLRTSLNGKIEKLLGVCYDGLDEKDKTLFLHVACLFNGEKVDRVKQLLAKSALDA 463

Query: 419 KIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
             G+  LV +SL+ I ++  I MH LLQ+MG EI+R + I DPG+R  L   ++I  VL 
Sbjct: 464 DFGLKVLVDRSLIHIYADGYIVMHFLLQQMGKEIIRGQCINDPGRRQFLVDAQEISDVLV 523

Query: 478 ENTSLPT--GINLDSLK---ELYLG-----GCSNLK------RFPEISCNIE-------- 513
           + T      GI+LD  +   E+Y+        +NL+       FP+ +  ++        
Sbjct: 524 DETGTKNVLGISLDMSELDDEVYISEKAFKKMTNLQFLRLYNHFPDEAVKLQLPHGLDYL 583

Query: 514 ---------------------------DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
                                      +L L+++ + +L   +  L+ L  +DL++   +
Sbjct: 584 PRKLRLLHRDSYPIKCMPSKFRPEFLVELTLRDSKLVKLWEGVQPLTSLTYMDLSSSKNI 643

Query: 547 KSV------------------------SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
           K +                        SS L NL  L+ L++S C KL+ LP  I NLES
Sbjct: 644 KDIPNLSGAMNLEKLYLRFCENLVTVSSSSLQNLNKLKVLDMSCCTKLKALPTNI-NLES 702

Query: 583 LEYLN---------------------LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L  LN                     L E   EK+PS ++  S+L  L +  CK L++LP
Sbjct: 703 LSVLNLRGCSKLKRFPCISTQVQFMSLGETAIEKVPSLIRLCSRLVSLEMAGCKNLKTLP 762

Query: 622 ELPCGS 627
            +P  S
Sbjct: 763 PVPANS 768


>gi|147817181|emb|CAN77679.1| hypothetical protein VITISV_018104 [Vitis vinifera]
          Length = 1015

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 254/736 (34%), Positives = 358/736 (48%), Gaps = 163/736 (22%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R++F +HL   L  + I TFIDD KL RG+ IS +L +AI+ SK S+V
Sbjct: 10  YDVFLSFRGEDTRNSFTAHLYKELRTKGINTFIDDDKLERGDVISSALVAAIQNSKFSLV 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------ 123
           + SE YASS WCL ELVKILE     GQ V+P+FY VDPS     +  +  +L       
Sbjct: 70  VLSENYASSGWCLEELVKILECMRTMGQRVLPIFYDVDPSHVRXHNGKFGEALAKHEENL 129

Query: 124 --------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                   W           G       E +LI+G    I  KL     +     LVG+E
Sbjct: 130 RTMERVPIWRDALTQVANLSGWDSRNKHEPMLIKGIATYIWNKLFSRSSNYADQNLVGIE 189

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           S I+EI+S L + S +   VGIWG+GGIGKTT+A A+Y+ IS  FE   F++N       
Sbjct: 190 SSIREIKSLLFTESLDVRMVGIWGMGGIGKTTLARAVYNQISHQFEACCFJEN------- 242

Query: 226 VGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLL 285
                               VLIV  D+ + K ++ LIG+   F  GSR+IITTR+ QLL
Sbjct: 243 --------------------VLIVIDDVNNSKILEDLIGKHGWFGIGSRIIITTRNKQLL 282

Query: 286 KNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQV 345
             H    V  V+EV++L+ ++++ LFSR AF + HP   ++ELS  ++ YA G+PLAL V
Sbjct: 283 VTH---GVNEVYEVEKLNDDNAVELFSRYAFKKAHPIDDYVELSQCIVVYAQGLPLALXV 339

Query: 346 LGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQY 405
           L                                       D E++IFLD ACFF+G+D+ 
Sbjct: 340 L---------------------------------------DNERDIFLDIACFFQGHDKX 360

Query: 406 LVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSR 465
            VM    +C F   IGI  L+ KSL+++  NK+  H+LLQ+MG EIVR+ S K+PGKRSR
Sbjct: 361 YVMEIFRSCGFFPDIGIRVLIEKSLISVVENKLMXHNLLQKMGREIVREASPKEPGKRSR 420

Query: 466 LWHPEDIYQVLNENTSLP--TGINLD--SLKEL-----YLGGCSNLKRFPEISCN----- 511
           LW  +D+  VL + T      GI+LD  SLKE+          + L+     + N     
Sbjct: 421 LWIHDDVNHVLTKXTGTEEVEGISLDLSSLKEINFTNEAFAPMNRLRLLKVYTLNFLMDS 480

Query: 512 -------------------IEDLDLKETAIEELPSSIGNLSRLVDLDL--TNCSGLKSVS 550
                              +  L   E  ++ LP+   NL  LVDL +  +    L   +
Sbjct: 481 KREKCKVHFSXGFKFHCEELRHLYWYEYPLKSLPNDF-NLKNLVDLSMPYSQIKQLWKGT 539

Query: 551 SRLCNLK--------------------SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
             L NLK                    +L RL L GC+ L K+   +G+L  L +L+L  
Sbjct: 540 KVLXNLKFMNLKHSKFLTETPDFSRVTNLERLVLKGCISLYKVHPSLGDLXKLNFLSLKN 599

Query: 591 -KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC---TSLKTLSNSSTL 646
            K  + +PS +  L  L    L  C + + LPE      +    C   T+++ L +S +L
Sbjct: 600 CKMLKSLPSCICDLKCLEXFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSL 659

Query: 647 LTRSSKHWDIFNFSNC 662
           L    ++ +I +F  C
Sbjct: 660 L----RNLEILSFEXC 671



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 96/192 (50%), Gaps = 34/192 (17%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE-----TAIEELPSSIGNLSR 534
           SLP+ I +L  L+   L GCS  +  PE   N+E L  KE     TAI  LPSS   L  
Sbjct: 605 SLPSCICDLKCLEXFILSGCSKFEELPENFGNLEML--KEFCADGTAIRVLPSSFSLLRN 662

Query: 535 LVDLDLTNCSG--------LKSVSSRLCNL-------------KSLRRLNLSGCLKLEKL 573
           L  L    C G        L   SS   N               SL   N+S    L+ L
Sbjct: 663 LEILSFEXCKGPPPSTSWWLPRRSSNFSNFVLSPLSSLSSLKTLSLSACNISDGATLDSL 722

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
               G L SLE L+L+E +F  +PS++ +L  L  L L+NCKRLQ+LPELP    SI AR
Sbjct: 723 ----GFLSSLEDLDLSENNFVTLPSNIXRLPHLKMLGLENCKRLQALPELPTSIRSIMAR 778

Query: 633 HCTSLKTLSNSS 644
           +CTSL+T+SN S
Sbjct: 779 NCTSLETISNQS 790



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK + L     L   P+ S   N+E L LK   ++ ++  S+G+L +L  L L NC 
Sbjct: 542 LXNLKFMNLKHSKFLTETPDFSRVTNLERLVLKGCISLYKVHPSLGDLXKLNFLSLKNCK 601

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS+ S +C+LK L    LSGC K E+LPE  GNLE L+           +PSS   L 
Sbjct: 602 MLKSLPSCICDLKCLEXFILSGCSKFEELPENFGNLEMLKEFCADGTAIRVLPSSFSLLR 661

Query: 605 KLSDLRLQNCK 615
            L  L  + CK
Sbjct: 662 NLEILSFEXCK 672


>gi|237770135|gb|ACR19031.1| TIR-NBS-LRR-type disease resistance-like protein [Pyrus x
           bretschneideri]
          Length = 1053

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 241/693 (34%), Positives = 357/693 (51%), Gaps = 96/693 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+ F SHL+AAL     + FID D L RG EI P L  AIE S+IS+V
Sbjct: 14  YDVFLSFRGEDTRNGFTSHLHAALQNWGFDAFIDEDNLKRGGEIKPELLRAIEESRISVV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---CPSLGWM----GI 127
           +FS+ YA SRWCL+ELVKI+E + + GQ V+P+FY VDPS       C +  +     GI
Sbjct: 74  VFSKSYAESRWCLDELVKIMECRERLGQQVLPIFYHVDPSHVRKQEGCLARAFQKHEDGI 133

Query: 128 FD-------------------IPTSESVLIEGNVND----------ISKKLSDLFPSDNK 158
            +                     T  + L   ++N+          + + + +L P  ++
Sbjct: 134 LEEKDDKEREAKKERVKQWREALTQAANLSGHHLNNRPEAKVIKTIVEENIVELLPGTDE 193

Query: 159 DQL----VGVESIIKEIESQLLSGS-TEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
            Q+    VG++S ++ I + L SG  ++   VGIWG+GG+GKTT A+AIY  I   F+  
Sbjct: 194 LQVAKYPVGIDSRVQPIINDLFSGGLSDVKRVGIWGMGGLGKTTAANAIYDKIHHGFQFK 253

Query: 214 YFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVLIVFYDL 253
            ++ ++ D +E+  GL ++                     ++  + RL R KVLIV  ++
Sbjct: 254 CYLGDVSD-TERRCGLVHLQEQLVSSILKRTTRINSVGEGISVIKERLRRRKVLIVVDNV 312

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             ++Q+  + G  + F PGS +IITTRD  LL      RV   +   E++  ++L LFS 
Sbjct: 313 DKVEQLRAIAGDREWFGPGSIIIITTRDEHLLNQ---VRVNLRYPAGEMNEEEALELFSW 369

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           + F  N P   +LELS  V+ Y  G+PLAL+VLGS L G    EW+S + KLKR+P  +I
Sbjct: 370 HTFENNCPKEEYLELSKKVVSYCGGLPLALKVLGSSLFGRPITEWQSYLEKLKRIPEGEI 429

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            + LK+S+DGLD  ++ IFL   C F G  +  V   LD C   A I I  L  + L+T+
Sbjct: 430 IEKLKISFDGLDYNQKTIFLHIFCCFLGMRKDHVTKILDECDLHATIDICVLRERCLITV 489

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----------LP 483
               + MHDL+QEMG  I+ ++S   PG+ SR W+ E I  VL   +           LP
Sbjct: 490 EWGVLKMHDLIQEMGKTIISEKSPTQPGRWSRPWNLEAITDVLTNKSGTEEIEALSLHLP 549

Query: 484 TG-----------INLDSLKEL---YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
           +            +N+  L  L   Y+    + K FP+    +  L       + +P  +
Sbjct: 550 SSEKKASFRTKAFVNMKKLGFLRLSYVELAGSFKHFPK---ELRWLCWHGFPFKYMPEHL 606

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            N  +LV LDL+  S L+        L++L+ L+ S   KL+K P +   L +LE LN +
Sbjct: 607 LNQPKLVALDLS-FSNLRKGWKNSKPLENLKILDFSHSEKLKKSP-DFSRLPNLEELNFS 664

Query: 590 EKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             D   KI  S+ QL KL+ +    C +L+ LP
Sbjct: 665 SCDSLSKIHPSIGQLKKLTWVNFDRCYKLRYLP 697



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 27/186 (14%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L++LK L       LK+ P+ S   N+E+L+     ++ ++  SIG L +L  ++   C 
Sbjct: 632 LENLKILDFSHSEKLKKSPDFSRLPNLEELNFSSCDSLSKIHPSIGQLKKLTWVNFDRCY 691

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL- 603
            L+ + +    LKS++ L+L  C  L +LPE +G++ SL  L+  +   ++ P+ + +L 
Sbjct: 692 KLRYLPAEFYKLKSVKNLSLMDC-SLRELPEGLGDMVSLRKLDADQIAIKQFPNDLGRLI 750

Query: 604 ---------------------SKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLS 641
                                S L  L +  C+ L+++P+LP       A  C +L+T+ 
Sbjct: 751 SLRVLTVGSYDCCNLPSLIGLSNLVTLTVYRCRCLRAIPDLPTNLEDFIAFRCLALETMP 810

Query: 642 NSSTLL 647
           + S LL
Sbjct: 811 DFSQLL 816


>gi|105922786|gb|ABF81437.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1289

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 242/682 (35%), Positives = 366/682 (53%), Gaps = 87/682 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRGKD R+NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+ S++
Sbjct: 143 YDVFLSFRGKDTRNNFTSHLYSNLAQRGIDVYMDDRELERGKTIEPALWKAIEESRFSVI 202

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           IFS  YASS WCL+ELVKI++   + GQ V+P+FY VDPS+                   
Sbjct: 203 IFSREYASSPWCLDELVKIVQCMKETGQTVLPIFYDVDPSEVAEQKGQYEKAFVEHEQNF 262

Query: 119 ------------CPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                       C S      GW  + +   SES+ I      IS KLS   P+ +K +L
Sbjct: 263 KENLEKVRNWKDCLSTVANLSGW-DVRNRNESESIKIIAEY--ISYKLSVTLPTISK-KL 318

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S ++ +   +     +   +GI G+GGIGKTT+A  +Y  I   FEGS F+ N+R+
Sbjct: 319 VGIDSRVEVLNGYIGEEVGKAIFIGICGMGGIGKTTVARVLYDRIRWQFEGSCFLANVRE 378

Query: 222 ESEKVGGLANIHLNFERRRLSRMKVLIVFY--------------------DLTDLKQIDL 261
              +  G   +        L     +   Y                    D+ D KQ++ 
Sbjct: 379 VFAEKDGPRRLQEQLLSEILMERASVWDSYRGIEMIKRRLRLKKILLILDDVDDKKQLEF 438

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L      F PGSR+IIT+RD  ++  +  +++   +E ++L+ +D+L LFS+ AF  + P
Sbjct: 439 LAEEPGWFGPGSRIIITSRDTNVITGNDDTKI---YEAEKLNDDDALMLFSQKAFKNDQP 495

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           A  F+ELS  V+ YANG+PLAL+V+GS+L G S  EW  A+N++  +P   I  VL++S+
Sbjct: 496 AEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIPEWRGAINRMNEIPDCKIIDVLRISF 555

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGL + ++ IFLD ACF KG  +  ++  LD+C F A IG   L+ KSL+++S +++ MH
Sbjct: 556 DGLHESDKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQVLIEKSLISVSRDQVWMH 615

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----------LP----TGIN 487
           +LLQ MG EIVR ES ++PG+RSRLW  ED+   L +NT           +P    +  N
Sbjct: 616 NLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFLDMPGIKESQWN 675

Query: 488 LDS---LKELYLGGCSN--LKRFPE-ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +++   +  L L   +N  L   PE +S  ++ L+      + LP  +  + +LV+L + 
Sbjct: 676 IEAFSKMSRLRLLKINNVQLSEGPEDLSNKLQFLEWHSYPSKSLPVGL-QVDQLVELHMA 734

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIPSS 599
           N S L+ +     +  +L+ +NLS  L L K P+  G  NLESL           ++  S
Sbjct: 735 N-SNLEQLWYGCKSAVNLKIINLSNSLYLTKTPDLTGIPNLESLILEGCT--SLSEVHPS 791

Query: 600 MKQLSKLSDLRLQNCKRLQSLP 621
           +    KL  + L NCK ++ LP
Sbjct: 792 LAHHKKLQYMNLVNCKSIRILP 813



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 10/151 (6%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP  + + SLK   L GCS L++FP+I  N++    L L  T I +L SS+ +L  L  L
Sbjct: 812 LPNNLEMGSLKVCILDGCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLL 871

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN----LAEKDFE 594
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE++G +ESLE  +    L+   F+
Sbjct: 872 SMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDNLKVLSLDGFK 931

Query: 595 KI--PSSMKQLSKLSDLRLQNCK-RLQSLPE 622
           +I  P S+  L  L  L L  C  R  +LPE
Sbjct: 932 RIVMPPSLSGLCSLEVLGLCACNLREGALPE 962


>gi|357499535|ref|XP_003620056.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495071|gb|AES76274.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1065

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 249/699 (35%), Positives = 361/699 (51%), Gaps = 98/699 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+ VFL+FRG D R+ F  +L  AL  + I TFID+ +L RG+EI+PSL  AIE S+I I
Sbjct: 17  KYQVFLNFRGSDTRYGFTGNLYKALDDKGIHTFIDNHELQRGDEITPSLLKAIEESRIFI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL------ 122
            +FS  YASS +CL+ELV I+      G++V+PVF+ V+P+        Y  +L      
Sbjct: 77  AVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFAVEPTIVRHQKGSYGEALAEHEKR 136

Query: 123 ------------GWM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKD 159
                       GW           G  D P   E  LI   V  IS K+S   P     
Sbjct: 137 FQNDPKSMERLQGWKEALSQAANLSGYHDSPPGYEYKLIGKIVKYISNKISQQ-PLHVAT 195

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG++S +++++S L  GS    + VGI+GIGG+GK+T+A AIY+ I+  FE S F++N
Sbjct: 196 YPVGLQSRVQQMKSLLDEGSDHGVHMVGIYGIGGLGKSTLAKAIYNFIADQFECSCFLEN 255

Query: 219 IRDESEKVGGLANIH-------LNFE-------------RRRLSRMKVLIVFYDLTDLKQ 258
           ++ ES     L N+        L  E             + RL   K+L++  D+  L Q
Sbjct: 256 VK-ESSASNNLKNLQQELLLKTLQLEIKLGSVSEGIPKIKERLHGKKILLILDDVDKLDQ 314

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L GRLD F PGSRVIITTRD  LL  H    +   + V+EL+  ++L L    AF  
Sbjct: 315 LEALAGRLDWFGPGSRVIITTRDKHLLDCHG---IEKTYAVEELNETEALELLRWKAFKN 371

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
               + + ++    + YA+G+PLA++V+GS L G S  E ES ++K  R+PH DIQK+L+
Sbjct: 372 EKVPSSYEDILKRAVVYASGLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHKDIQKILR 431

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTI---- 433
           +SYD LD+EEQ++FLD AC  KG     V   L     +S K  +  LV KSL+ I    
Sbjct: 432 LSYDALDEEEQSVFLDIACCIKGCRLEEVEQILHHHYGYSIKSHLRVLVDKSLIKISWCF 491

Query: 434 -SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG------I 486
            S  K+T+H+L++ MG E+VRQES K+PG+RSRLW  +DI  VL ENT   TG      +
Sbjct: 492 FSGIKVTLHELIEVMGKEVVRQESPKEPGERSRLWSQDDIVHVLTENTG--TGKTEMICM 549

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL-------------- 532
           NL S++ +        K+   +   I +       ++ LPSS+  L              
Sbjct: 550 NLHSMESVIDKKGKAFKKMTRLKTLIIENGHCSKGLKHLPSSLKALKWEGCLSKSLSSSI 609

Query: 533 -----SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
                  +  L L +C  L  +   +  L +L +L+   C  L  +   IG+L  LE L+
Sbjct: 610 LSKKFQDMTILILDHCEYLTHIPD-VSGLSNLEKLSFECCYNLITIHNSIGHLNKLERLS 668

Query: 588 -LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
               +  ++ P     L+ L +L +  C  L+S PEL C
Sbjct: 669 AFGCRKLKRFPPL--GLASLKELDICCCSSLKSFPELLC 705



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 20/169 (11%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLK-ETAIEELPSSIGNLSRLVDLDLT 541
           + L SLKEL +  CS+LK FPE+ C   NI+++DL    +I ELPSS  NLS L +L + 
Sbjct: 681 LGLASLKELDICCCSSLKSFPELLCKMTNIKEIDLDYNISIGELPSSFQNLSELDELSVR 740

Query: 542 NCSGLK----------SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
               L+           V S++  L+ +   NLS     E L   +    ++E L+L+  
Sbjct: 741 EARMLRFPKHNDRMYSKVFSKVTKLR-IYECNLSD----EYLQIVLKWCVNVELLDLSHN 795

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
           +F+ +P  + +   L  L L  C  L+ +  +P     + A  C SL +
Sbjct: 796 NFKILPECLSECHHLKHLGLHYCSSLEEIRGIPPNLKELSAYQCKSLSS 844



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 27/133 (20%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L+ L+ L   GC  LKRFP +                       L+ L +LD+  CS L
Sbjct: 660 HLNKLERLSAFGCRKLKRFPPLG----------------------LASLKELDICCCSSL 697

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS-----MK 601
           KS    LC + +++ ++L   + + +LP    NL  L+ L++ E    + P        K
Sbjct: 698 KSFPELLCKMTNIKEIDLDYNISIGELPSSFQNLSELDELSVREARMLRFPKHNDRMYSK 757

Query: 602 QLSKLSDLRLQNC 614
             SK++ LR+  C
Sbjct: 758 VFSKVTKLRIYEC 770


>gi|449494799|ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 936

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 260/730 (35%), Positives = 387/730 (53%), Gaps = 101/730 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL  A     I  F DD +L RG +IS  L  AIEGSK+++V
Sbjct: 14  YDVFLSFRGEDTRKNFTDHLYYAFKDAGINVFRDDPELERGEDISSELERAIEGSKVAVV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           +FSE YA S WCL ELVKI+E +    Q+V P+FY VDPS                +  Y
Sbjct: 74  VFSERYAESGWCLEELVKIMECRRTLRQLVFPIFYNVDPSCVRKQKGEFEEAFVKHEVRY 133

Query: 119 CPSLGWMGIFDIPTSESVLIEGN-----------------VNDISKKLSD------LFPS 155
              +  +  + +  +E+  + G                  V  +SK+++       L+P 
Sbjct: 134 FRDIDRVLKWRMALTEAANLSGWDLRNIANGHEAKFIRLIVEKVSKEVNSKYLFIALYP- 192

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
                 VG+ES +K + S L  GS +   VGI G+GG+GKTT+A A+Y+ +  +FE   F
Sbjct: 193 ------VGIESRLKLLLSHLHIGSNDVRFVGILGMGGLGKTTVAKALYNQLYHNFEAKCF 246

Query: 216 MQNIRDESEKVGGL-----------ANIHL-NFER------RRLSRMKVLIVFYDLTDLK 257
           + NI+ E+  +  L            NI+L N ++       RL   ++L++  D+ DL 
Sbjct: 247 LSNIKAETSNLIHLQKQLLSSITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLS 306

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+  L    D F  GSR+IITTRD  LL       V  +  + E+  +++L LFS +AF 
Sbjct: 307 QLTALATSRDLFASGSRIIITTRDRHLLNQ---LEVDEICSIDEMDDDEALELFSWHAFR 363

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
            ++P+  F +LS  V+ Y  G+PLAL+VLGS+L G S EEWE  + KLK++P+  IQK L
Sbjct: 364 NSYPSETFHQLSKQVVTYCGGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQKKL 423

Query: 378 KVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN- 435
           K+S+DGL+D   ++IFLD +CFF G ++  V   LD C F  +IGIS L+ + L+TI + 
Sbjct: 424 KISFDGLNDHTYKDIFLDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLLTIGDK 483

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD---- 489
           N++ MHDLL++MG EIVR+   K P + SRL+  E++  VL   + T    G++L     
Sbjct: 484 NRLMMHDLLRDMGREIVRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRF 543

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDL--DLKETA------------IEELPSSIGNLSRL 535
           S ++L     + +++   +  N  D+  D K  +            ++ LP    ++ +L
Sbjct: 544 SKQKLSTKAFNEMQKLRLLQLNFVDVNGDFKHISEEIRWVCWHGFPLKFLPKEF-HMDKL 602

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD--F 593
           V +DL   S ++        LK+L+ LNL     L   P     L +LE L+L +     
Sbjct: 603 VAMDL-RYSQIRFFWKESKFLKNLKFLNLGHSHYLTHTP-NFSKLPNLEILSLKDCKNLI 660

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
           E +PS++  L KL  L L NC  LQ +P LP   SS++A +CTSL+  S+ S +    S 
Sbjct: 661 EFLPSTISGLLKLETLLLDNCPELQLIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGS- 719

Query: 653 HWDIFNFSNC 662
                + SNC
Sbjct: 720 ----LSMSNC 725


>gi|356542387|ref|XP_003539648.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1069

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 245/705 (34%), Positives = 364/705 (51%), Gaps = 103/705 (14%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P   +DVF++FRG+D R NFV HL++ L    + TF+DD+ L +G E+   L  AIEGS+
Sbjct: 15  PGRMYDVFINFRGEDTRRNFVCHLHSVLSNAGVNTFLDDENLVKGMELI-QLMRAIEGSQ 73

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD--------------- 115
           IS+V+FS+ Y  S WCL EL  I++    +G +VVP+FY V PSD               
Sbjct: 74  ISLVVFSKNYTQSTWCLTELENIIKCHRLHGHVVVPIFYHVSPSDVRRQEGDFGKALNAS 133

Query: 116 ----------------------AGYCPSLGWMGIFDI--PTSESVLIEGNVNDISKKLSD 151
                                 A +C   GW    D+  P +E+ L++  V+D+ KKL+ 
Sbjct: 134 AEKIYSEDKYVLSRWGSALTTAANFC---GW----DVMKPGNEAKLVKEIVDDVLKKLNG 186

Query: 152 L------FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
                  FP       VG+E   +E+   + + ST+   +GIWG+GG GKTTIA  IY+ 
Sbjct: 187 EVLSIPEFP-------VGLEPRGQEVIGFIKNQSTKVCMIGIWGMGGSGKTTIAKFIYNQ 239

Query: 206 ISSHFEGSYFMQNIRDESEKVGGLANIHLNFE----------------------RRRLSR 243
           I S F G  F++NIR   E   G  + HL  +                       +RLS 
Sbjct: 240 IHSRFPGKSFIENIRKVCE-TDGRGHAHLQEQLLTDVLKTKVKIHSVGMGTSMIEKRLSG 298

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            +VLIV  D+ +  Q+  L G       GS +IITTRD  LL       V +V++++E++
Sbjct: 299 KEVLIVLDDVNEFDQLKDLCGNRKWIGLGSVIIITTRDRGLLNI---LNVDYVYKMEEMN 355

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L LFS +AF +  P   F EL+  V+ Y  G+PLAL+VLGSYL   +E+EW++ ++
Sbjct: 356 ENEALELFSWHAFRKAEPREEFNELARNVVAYCGGLPLALEVLGSYLIERTEKEWKNLLS 415

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           KL+ +P+  +QK L++S+DGL D+ E++IFLD  CFF G D+  V   L+ C   A IGI
Sbjct: 416 KLEIIPNNQVQKKLRISFDGLHDQMEKDIFLDVCCFFIGKDKAYVTEILNGCGLHADIGI 475

Query: 423 SRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
           + L+ +SL+ +  NNK+ MH L+++MG EI+R+   K+PGKRSRLW  +D+  VL +NT 
Sbjct: 476 TVLIERSLIIVEKNNKLGMHQLVRDMGREIIRESLTKEPGKRSRLWFHKDVIDVLTKNTG 535

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
                 L     L    C     F E    ++ L L +    ++    GN S+   L   
Sbjct: 536 TEAVEGLALKLHLTSRDCFKADAFEE----MKRLRLLKLDHAQVTGDYGNFSK--QLRWI 589

Query: 542 NCSG--LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           N  G  LK +      L+ +  ++L     L    +E   L  L+ LNL+   +      
Sbjct: 590 NWQGFPLKYIPKTF-YLEGVIAIDLKHS-NLRLFWKESQVLGQLKMLNLSHSKYLTETPD 647

Query: 600 MKQLSKLSDLRLQNCKRL----QSLPELPCGSSIHARHCTSLKTL 640
             +L KL +L L++C RL    +S+ +L     I+   CTSL  L
Sbjct: 648 FSKLPKLENLILKDCPRLCKVHKSIGDLHNLLLINWTDCTSLGNL 692



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L L     L   P+ S    +E+L LK+   + ++  SIG+L  L+ ++ T+C+
Sbjct: 628 LGQLKMLNLSHSKYLTETPDFSKLPKLENLILKDCPRLCKVHKSIGDLHNLLLINWTDCT 687

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++  R   LKS++ L LSGCLK++KL E I  +ESL  L       +K+P S+
Sbjct: 688 SLGNLPRRAYELKSVKTLILSGCLKIDKLEENIMQMESLTTLIAENTAVKKVPFSV 743


>gi|357513919|ref|XP_003627248.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521270|gb|AET01724.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1106

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 270/829 (32%), Positives = 398/829 (48%), Gaps = 192/829 (23%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF+SFRG D+R  F+ HL  A  ++KI  F+D KL +GNEIS SL  AIE S IS+V
Sbjct: 45  KYDVFVSFRGPDIREVFLPHLIKAFSQKKIVYFVDYKLTKGNEISQSLFEAIETSSISLV 104

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL------- 122
           IFS+ YASS WCL+ELVK+++ + K G I++PVFY VDP+     +  Y  +        
Sbjct: 105 IFSQNYASSSWCLDELVKVVDCREKDGNILLPVFYKVDPTIVRHQNGTYADAFVEHEQKY 164

Query: 123 GWM-------------GIFDIPTSESV----LIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
            W               I    TS+ +    L+E  V  + K+L  +   ++K  L+G+ 
Sbjct: 165 NWTVVQRWRSALKKSANINGFHTSKRLNDAELVEEIVKFVLKRLDHVHLVNSKG-LIGIG 223

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
             I  +ES L   S +   +GIWG+ GIGKTTIA  +YS + S + G YF  N+R+E  +
Sbjct: 224 KQISRVESLLQVESQDVRAIGIWGMSGIGKTTIAEEVYSMLCSEYSGCYFKANVREECRR 283

Query: 226 VG-------------GLANIHLNFERR-------RLSRMKVLIVFYDLTDLKQIDLLIGR 265
            G             G  ++ ++   R       RL  MKVL+V  D++D +Q+D+LIG 
Sbjct: 284 HGIIHLKKKLFSTLLGEQDLKIDTPHRLPYRDFVRLRTMKVLVVLDDVSDQEQLDILIGT 343

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP-AAG 324
           LD F  GSR+IITT D Q+L   +G     ++EV+ L+++DSL LF+ NAF QN      
Sbjct: 344 LDWFGKGSRIIITTVDKQVLG--KGVFANDIYEVRPLNFDDSLRLFNLNAFEQNQTYQIE 401

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           + ELS  ++KYA G+PL L++LG  L+G  ++EWE  + ++K++P     +++++SY+ L
Sbjct: 402 YYELSKRMVKYAKGIPLILEILGRKLRGKDKKEWEDQLERVKKVPIKKFHEIIRLSYNDL 461

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG------ISRLVGKSLVTIS-NNK 437
           +  E+ +FLD ACF  G    L +N  D    +  +G      +  L  K+L+ IS +N 
Sbjct: 462 NRHEKRMFLDIACFIDG----LHLNVDDIKLLAKDLGYPVGVELESLKNKALINISPDNV 517

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------------SLPTG 485
           ++MH ++QE   E VR+ESI DP  +SRL    D YQVL  N             S+   
Sbjct: 518 VSMHTIIQETAWEFVREESIDDPENQSRLVD-YDTYQVLKHNRGSEAIRSIATDFSIIKD 576

Query: 486 INLDS----------LKELYLGGCSNLKRFPEISCNIED-----------LDLKETAIEE 524
           + L+S            ++Y  G     + P  S N+             L      +E 
Sbjct: 577 LQLNSKVFAKMNKLQYLDIYTKGYYVFFQIPR-SLNLPQGLKSLPDELRYLRWAYYPLES 635

Query: 525 LPSSIGNLSRLVDLDLTNCSGLK----------------SVSSRLCNLKSLRR------- 561
           LPS   N  +LV L+L N    K                S+SS+L  L +L +       
Sbjct: 636 LPSKF-NGEKLVVLNLQNSQVKKLWHEDKDVVNLKFLILSLSSQLMELPNLSKAKNLAIV 694

Query: 562 -----------------------LNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDFE 594
                                  L+L GC  L  L   I +L SL YL+LA     K+F 
Sbjct: 695 DLRMCGRLTSIHPSVFSLNKLEKLDLGGCFSLTSLKSNI-HLSSLRYLSLAGCIKLKEFS 753

Query: 595 KIPSSM----------KQLS---------------------------KLSDLR---LQNC 614
                M          KQLS                           +LS LR   L++C
Sbjct: 754 VTSKEMVLLNLEHTGIKQLSSSIGLQTKLEKLLLSHSFIENLPKSIRRLSSLRHLELRHC 813

Query: 615 KRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           ++LQ LP+LP    ++ A  C SL+ ++  S  L    ++    +F NC
Sbjct: 814 RKLQRLPKLPSSLITLDATGCVSLENVTFPSRALQVLKENKTKVSFWNC 862



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 3/140 (2%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           TSL + I+L SL+ L L GC  LK F   S  +  L+L+ T I++L SSIG  ++L  L 
Sbjct: 727 TSLKSNIHLSSLRYLSLAGCIKLKEFSVTSKEMVLLNLEHTGIKQLSSSIGLQTKLEKLL 786

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L++ S ++++   +  L SLR L L  C KL++LP+   +L +L+       +    PS 
Sbjct: 787 LSH-SFIENLPKSIRRLSSLRHLELRHCRKLQRLPKLPSSLITLDATGCVSLENVTFPSR 845

Query: 600 MKQLSKLSDLRLQ--NCKRL 617
             Q+ K +  ++   NC +L
Sbjct: 846 ALQVLKENKTKVSFWNCVKL 865


>gi|147792427|emb|CAN68030.1| hypothetical protein VITISV_003124 [Vitis vinifera]
          Length = 1039

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 266/720 (36%), Positives = 380/720 (52%), Gaps = 106/720 (14%)

Query: 1   MASSSS---SINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGN 56
           MAS+S+   S   I H  +DVFLSFRG+D R NF  HL   L    I TF DD+ L +G 
Sbjct: 1   MASTSTQKASSVTISHT-YDVFLSFRGEDTRKNFTDHLYKNLDAYGIRTFRDDEELEKGG 59

Query: 57  EISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD- 115
           +I+  LS AIE SKI  VIFS+ YA+SRWCLNEL+KI+ES  K G+IV+P+FY V+PSD 
Sbjct: 60  DIAFDLSRAIEESKIFTVIFSKNYANSRWCLNELLKIIESMEKEGKIVLPIFYHVNPSDV 119

Query: 116 ----AGYCPSLG----------------WMGIFDIPTS----------ESVLIEGNVNDI 145
                 Y  +                  W       ++          E+ +++    DI
Sbjct: 120 RKQLGSYGEAFANHEKDADEEKKASIQKWRTALSKASNLSGWHIDEQYETNVLKEITGDI 179

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            ++L+   P +    +VG+   +++++S +     E   VGI GIGGIGKTT+A AIY+ 
Sbjct: 180 IRRLNHDQPLNVGKNIVGMSFHLEKLKSLMKKKFNEVCVVGICGIGGIGKTTVAMAIYNE 239

Query: 206 ISSHFEGSYFMQNIRDESE-----------------KVGGLANIH--LNFERRRLSRMKV 246
           +S+ ++GS F++ +++ SE                 K   L+NI   +   +R LS  +V
Sbjct: 240 LSNQYDGSSFLRKVKERSERDTLQLQHELLQDILRGKSLKLSNIDEGVKMIKRSLSSKRV 299

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L+VF D+ +LKQ++ L      F   S +IITTRD  LL  +    V   +EV  L+  +
Sbjct: 300 LVVFDDVDNLKQLEYLAEEQGWFGAKSTIIITTRDKNLLAQYG---VNIEYEVTTLNEEE 356

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS-YLKGMSEEEWESAVNKL 365
           +  LFS  AF QN P     +L   V++YA G+PLAL+VLGS +    ++EEW+SA+ KL
Sbjct: 357 AXELFSLWAFRQNLPNKVDQDLFYEVVRYAKGLPLALKVLGSNFFDKKTKEEWKSALEKL 416

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           K+     I  VL+ SYDGLD  +++IFLD ACFFKG D+  V   L      AK GI  L
Sbjct: 417 KKSSDERIYSVLRTSYDGLDSVDKDIFLDIACFFKGKDKDFVSRILGP---XAKNGIRTL 473

Query: 426 VGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE--------------- 470
             K L+TIS N + MHD++Q+MG  IV QE  KDPG RSRLW  +               
Sbjct: 474 EDKCLITISXNMLDMHDMVQQMGWNIVHQECPKDPGGRSRLWGSDAEFVLTKNXLLXKLK 533

Query: 471 --------------DIYQVLNEN----------TSLPTGIN-LDSLKELYLGGCSNLKRF 505
                         D   V N             SLP+  +    L+ L  GGCS L  F
Sbjct: 534 VINLSYSVNLIKIPDFSSVPNLEILTLEGCRRLKSLPSSFDKFKCLQSLSCGGCSKLTSF 593

Query: 506 PEISCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRL 562
           PEI+ N   + + +   T+I E+P SI +L+ L +L L +C  L + S  + +L SL+ L
Sbjct: 594 PEINGNMGKLREFNFSGTSINEVPLSIKHLNGLEELLLEDCKKLVAFSENIGSLSSLKSL 653

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L GC KL+ LP  I +L++L+ L+L+  ++  ++P S+  L  L  L L  C + +  P
Sbjct: 654 KLKGCSKLKGLPSSIXHLKALKNLDLSXCENLVRLPESICSLXSLETLFLNGCLKFKGFP 713



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 88/147 (59%), Gaps = 6/147 (4%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVD 537
           LP  I +L SL+ L+L GC   K FP +     N+  L L  TAI+E+PSSI +L  L  
Sbjct: 688 LPESICSLXSLETLFLNGCLKFKGFPGVKGHMNNLRVLRLDSTAIKEIPSSITHLKALEY 747

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L+  S +  V   +C+L SL+ L+LS C  +  +P +I  L SLE LNL    F  IP
Sbjct: 748 LNLSR-SSIDGVVLDICHLLSLKELHLSSC-NIRGIPNDIFCLSSLEILNLDGNHFSSIP 805

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELP 624
           + + +LS L+ L L++C +LQ +PELP
Sbjct: 806 AGISRLSHLTSLNLRHCNKLQQVPELP 832


>gi|15238807|ref|NP_197337.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005160|gb|AED92543.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 900

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 252/756 (33%), Positives = 372/756 (49%), Gaps = 140/756 (18%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +H VF SF GKDVR  F+SHL     R+ I TFID+ + R   IS  L  AI  S+I++V
Sbjct: 15  RHHVFPSFSGKDVRRTFLSHLLKEFRRKGIRTFIDNDIKRSQMISSELVRAIRESRIAVV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           + S  YASS WCLNELV+I     K  Q+++PVFY VDPSD                   
Sbjct: 75  VLSRTYASSSWCLNELVEI----KKVSQMIMPVFYEVDPSDVRKRTGEFGKAFEEACERQ 130

Query: 117 -------GYCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                   +  +L ++      +S     E+ LI+     IS +L+     D+ + LVG+
Sbjct: 131 PDEEVKQKWREALVYIANIAGESSQNWDNEADLIDKIAMSISYELNSTLSRDSYN-LVGI 189

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ++ ++E++S L   STE   VGIWG  GIGKTTIA A+++ +S +F+ + FM+N++  S 
Sbjct: 190 DNHMRELDSLLCLESTEVKMVGIWGPAGIGKTTIARALFNRLSENFQHTIFMENVKGSSR 249

Query: 225 KVGGLA---------------------NIH-LNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                A                      IH L   + RL  +KVL+V  D+  L+Q+D L
Sbjct: 250 TSELDAYGFQLRLQEQFLSEVIDHKHMKIHDLGLVKERLQDLKVLVVLDDVDKLEQLDAL 309

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           + +   F  GSR+I+TT + QLL+ H    +  ++E+   S +DSL +F + AFG++   
Sbjct: 310 VKQSQWFGSGSRIIVTTENKQLLRAHG---ITCIYELGFPSRSDSLQIFCQYAFGESSAP 366

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
            G +EL+  + K A  +PLAL+VLGS L+GMS++E +SA+ +L+   + DI+ VL+V YD
Sbjct: 367 DGCIELATEITKLAGYLPLALKVLGSSLRGMSKDEQKSALPRLRTSLNEDIRNVLRVGYD 426

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKITM 440
           G+ D+++ IFL  AC F G +   V   L +       G+  L  +SL+ IS  N  ITM
Sbjct: 427 GIHDKDKVIFLHIACLFNGENVDYVKQILASSGLDVTFGLQVLTSRSLIHISRCNRTITM 486

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKELYL 496
           H+LL+++G EIV ++SI +PGKR  L    +IY VL +NT      GI+LD   + EL+L
Sbjct: 487 HNLLEQLGREIVCEQSIAEPGKRQFLMDASEIYDVLADNTGTGAVLGISLDISKINELFL 546

Query: 497 -----GGCSNL-----------------------------------KRFPEISCNIE--- 513
                GG  NL                                     FP  S  +    
Sbjct: 547 NERAFGGMHNLLFLRFYKSSSSKDQPELHLPRGLDYLPRKLRLLHWDAFPMTSMPLSFCP 606

Query: 514 ----DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
                ++++E+ +E+L      L  L  +DL+    LK +   L    ++  L LS C  
Sbjct: 607 QFLVVINIRESQLEKLWEGTQPLRSLKQMDLSKSENLKEIPD-LSKAVNIEELCLSYCGS 665

Query: 570 LEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL----- 623
           L  LP  I NL  L  L++      E IP +M  L  LS L L  C RL+S PE+     
Sbjct: 666 LVMLPSSIKNLNKLVVLDMKYCSKLEIIPCNM-DLESLSILNLDGCSRLESFPEISSKIG 724

Query: 624 -------------------PCGSSIHARHCTSLKTL 640
                              PC +++    C +LKT 
Sbjct: 725 FLSLSETAIEEIPTTVASWPCLAALDMSGCKNLKTF 760



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 13/143 (9%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK++ L    NLK  P++S   NIE+L L    ++  LPSSI NL++LV LD+  CS
Sbjct: 629 LRSLKQMDLSKSENLKEIPDLSKAVNIEELCLSYCGSLVMLPSSIKNLNKLVVLDMKYCS 688

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE---EIGNLESLEYLNLAEKDFEKIPSSMK 601
            L+ +   + +L+SL  LNL GC +LE  PE   +IG      +L+L+E   E+IP+++ 
Sbjct: 689 KLEIIPCNM-DLESLSILNLDGCSRLESFPEISSKIG------FLSLSETAIEEIPTTVA 741

Query: 602 QLSKLSDLRLQNCKRLQSLPELP 624
               L+ L +  CK L++ P LP
Sbjct: 742 SWPCLAALDMSGCKNLKTFPCLP 764



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 27/139 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P  ++L+SL  L L GCS L+ FPEIS  I  L L ETAIEE+P+++ +   L  LD++
Sbjct: 693 IPCNMDLESLSILNLDGCSRLESFPEISSKIGFLSLSETAIEEIPTTVASWPCLAALDMS 752

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
            C  LK+                  CL            +++E+L+L+  + E++P  + 
Sbjct: 753 GCKNLKTFP----------------CLP-----------KTIEWLDLSRTEIEEVPLWID 785

Query: 602 QLSKLSDLRLQNCKRLQSL 620
           +LSKL+ L + +C +L+S+
Sbjct: 786 KLSKLNKLLMNSCMKLRSI 804



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +PT + +   L  L + GC NLK FP +   IE LDL  T IEE+P  I  LS+L  L +
Sbjct: 736 IPTTVASWPCLAALDMSGCKNLKTFPCLPKTIEWLDLSRTEIEEVPLWIDKLSKLNKLLM 795

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
            +C  L+S+SS +  L+ ++ L+  GC  +   P EI
Sbjct: 796 NSCMKLRSISSGISTLEHIKTLDFLGCKNIVSFPVEI 832


>gi|356560717|ref|XP_003548635.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 242/706 (34%), Positives = 361/706 (51%), Gaps = 123/706 (17%)

Query: 27  VRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRW 85
           +R NFVSHL +AL    + TF+D+    +G E++  L   IEG +I +V+FS  Y +S W
Sbjct: 1   LRWNFVSHLYSALSNAGVNTFLDEMNYPKGEELNEGLLRTIEGCRICVVVFSTNYPASSW 60

Query: 86  CLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG-------------WMGI 127
           CL EL KI+E    YG IV+P+FY VDPS        +  +L              W  +
Sbjct: 61  CLKELEKIIECHRTYGHIVLPIFYDVDPSHIRHQRGAFGKNLKAFQGLWGKSVLSRWRTV 120

Query: 128 ---------FDIPTS--ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLL 176
                    +D+  +  E+ L++    D+  KL + F    +   VG+ES ++E+   + 
Sbjct: 121 LTEAANFSGWDVSNNRNEAQLVKEIAEDVLTKLDNTFMHMTEFP-VGLESHVQEVIGYIE 179

Query: 177 SGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD--ESEKVGGL----- 229
           + ST+   VGIWG+GG+GKTT A AIY+ I   F G  F+++IR+  E+++ G L     
Sbjct: 180 NQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFMGRCFIEDIREVCETDRRGHLHLQEQ 239

Query: 230 --ANI---HLNFE---------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
             +N+    +N +           +LSR K LIV  D+ +  Q+ +L G    F  GS V
Sbjct: 240 LLSNVLKTKVNIQSVGIGRAMIESKLSRRKALIVLDDVIEFGQLKVLCGNRKWFGQGSIV 299

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           IITTRDV+LL  H+  +V  V++++E+  N SL LFS +AFG+  P   F EL+  V+ Y
Sbjct: 300 IITTRDVRLL--HK-LKVDFVYKMEEMDENKSLELFSWHAFGEAKPTEEFDELARNVVAY 356

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE-EQNIFLD 394
             G+PLAL+V+GSYL    ++EWES ++KLK +P+  +Q+ L++SY+GL D  E++IFLD
Sbjct: 357 CGGLPLALEVIGSYLSERRKKEWESVLSKLKIIPNDQVQEKLRISYNGLGDHMEKDIFLD 416

Query: 395 TACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVR 453
             CFF G D+  V   L+ C   A IGI+ L+ +SLV ++ NNK+ MH L+++M  EI+R
Sbjct: 417 ICCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLEMHPLIRDMDREIIR 476

Query: 454 QESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI------------------NLDSL-- 491
           + S K PGKRSRLW  ED   VL  N  T    G+                   +D L  
Sbjct: 477 ESSTKKPGKRSRLWFQEDSLNVLTKNTGTKAIEGLALKLHSSSRDCFKAYAFKTMDQLRL 536

Query: 492 ---------------------------------KELYLGGC-------SNLK---RFPEI 508
                                            K  +LGG        SNL+   + P++
Sbjct: 537 LQLEHVELTGDYGYLPKHLRWIYWKRFPLKYMPKNFFLGGVIAIDLKHSNLRLVWKEPQV 596

Query: 509 SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
              ++ L+L  +          NL  L  L L +C  L  V   + +L++L  +NL  C 
Sbjct: 597 LPWLKILNLSHSKYLTETPDFSNLPSLEKLILKDCPSLCKVHQSIGDLQNLLLINLKDCT 656

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQN 613
            L  LP EI  L+SLE L L+     +K+   + Q+  L+ L  +N
Sbjct: 657 SLSNLPREIYKLKSLETLILSGCSKIDKLEEDIVQMEYLTTLIAKN 702



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 20/132 (15%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T  P   NL SL++L L  C +L       C +               SIG+L  L+ ++
Sbjct: 612 TETPDFSNLPSLEKLILKDCPSL-------CKVH-------------QSIGDLQNLLLIN 651

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L +C+ L ++   +  LKSL  L LSGC K++KL E+I  +E L  L       +++  S
Sbjct: 652 LKDCTSLSNLPREIYKLKSLETLILSGCSKIDKLEEDIVQMEYLTTLIAKNTAVKQVSFS 711

Query: 600 MKQLSKLSDLRL 611
           + +L  +  + L
Sbjct: 712 IVRLKSIEYISL 723


>gi|4850296|emb|CAB43052.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
 gi|7267816|emb|CAB81218.1| RPP1-WsA-like disease resistance protein [Arabidopsis thaliana]
          Length = 1174

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 257/740 (34%), Positives = 379/740 (51%), Gaps = 113/740 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSS+       ++DVF SFRG+DVR+NF+SHL      + I TF DD + R + I  
Sbjct: 1   MASSSSN-----SWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGH 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L +AI  SKIS+V+FSE YASS WCL+EL++I++ K + G  V+PVFY VDPSD     
Sbjct: 56  ELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIR--K 113

Query: 121 SLGWMGIFDIPT-------------------------------SESVLIEGNVNDISKKL 149
             G  G+  + T                               +E+  I     D+ +KL
Sbjct: 114 QTGKFGMSFLETCCGKTEERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLEKL 173

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
            +  PS + + LVG+E+ I ++ES L   S     VGIWG  G+GKTTIA A+Y+    +
Sbjct: 174 -NATPSRDFNDLVGMEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHEN 232

Query: 210 FEGSYFMQNIRDESEKVG----------------------GLANIHLNFERRRLSRMKVL 247
           F  S FM+N+R+   + G                       L   HL     RL   KVL
Sbjct: 233 FNLSIFMENVRESYGEAGLDDYGLKLHLQQRFLSKLLDQKDLRVRHLGAIEERLKSQKVL 292

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           I+  D+ +++Q+  L      F   SR+++TT++ QLL +H    + H+++V   S  ++
Sbjct: 293 IILDDVDNIEQLKALAKENQWFGNKSRIVVTTQNKQLLVSHD---INHMYQVAYPSKQEA 349

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           LT+F ++AF Q+ P+     L+      A  +PLAL+VLGS+++G  +EEWE ++  LK 
Sbjct: 350 LTIFCQHAFKQSSPSDDLKHLAIEFTTLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKS 409

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKG-NDQYLVMNFLDACRFSAKIGISRLV 426
               +++KVLKV YDGL D E+++FL  AC F G ++ YL    +         G+  L 
Sbjct: 410 RLDGEVEKVLKVGYDGLHDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLA 469

Query: 427 GKSLVT-ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
            KSL+    N +I MH LL+++G E+VR++SI +PGKR  L + ++   VL+ NT   T 
Sbjct: 470 DKSLIQKFENGRIEMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTV 529

Query: 485 -GINLDSL---KELYLGGCSNLKRFPE----------ISCNIED-----LDLKETAIEEL 525
            GI+LD     +ELY+      K F E          +S  I+D     L L E  +  L
Sbjct: 530 LGISLDMCEIKEELYISE----KTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYL 585

Query: 526 PS---------------SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           P                S      LV+L++++ S LK + S +  L++LR +NL+    L
Sbjct: 586 PQLRLLHWDAYPLEFFPSSFRPECLVELNMSH-SKLKKLWSGVQPLRNLRTMNLNSSRNL 644

Query: 571 EKLPE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPC 625
           E LP   E   L  L+ L   E   E +PSS+K L  L  L +  CK+L+ +P    LP 
Sbjct: 645 EILPNLMEATKLNRLD-LGWCESLVE-LPSSIKNLQHLILLEMSCCKKLEIIPTNINLPS 702

Query: 626 GSSIHARHCTSLKTLSNSST 645
              +H R+CT L+T    ST
Sbjct: 703 LEVLHFRYCTRLQTFPEIST 722



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 36/183 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ L+   C+ L+ FPEIS NI  L+L  TAI E+P S+   S++ ++   
Sbjct: 694 IPTNINLPSLEVLHFRYCTRLQTFPEISTNIRLLNLIGTAITEVPPSVKYWSKIDEI--- 750

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
                                    C++  K+   +     LE L L E K+ E IP  +
Sbjct: 751 -------------------------CMERAKVKRLVHVPYVLEKLCLRENKELETIPRYL 785

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
           K L +L  + +  C  + SLP+LP   S++ A +C SL+ L          S H    NF
Sbjct: 786 KYLPRLQMIDISYCINIISLPKLPGSVSALTAVNCESLQILHGH---FRNKSIH---LNF 839

Query: 660 SNC 662
            NC
Sbjct: 840 INC 842


>gi|224085411|ref|XP_002307568.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857017|gb|EEE94564.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 541

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 208/533 (39%), Positives = 299/533 (56%), Gaps = 62/533 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEIS 59
           MASS+S+ +   +   DVFLSF+G D    F  HL +AL R+ I TF D +++N G EI 
Sbjct: 1   MASSNSNSSKWDY---DVFLSFKGADTGKGFTDHLYSALVRDGIHTFRDVNEINSGEEIG 57

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P    AIE S+ SIVI S+GYASS WCL+ELV ILE + + G  V PVFY +DPSD    
Sbjct: 58  PEYLQAIEKSRFSIVILSKGYASSTWCLDELVHILECRKEGGHAVWPVFYDIDPSDVEEL 117

Query: 117 -------------GYCPSLGWMGIFDIPTSESVLIEG-------------NVNDISKKLS 150
                         +   +  +  +     E   ++G             N++ I K++S
Sbjct: 118 KGSFEEAFAEHEKSFKDDMDKVQRWKDALREVAYLKGLDLQKHWDGHEAKNIDYIVKEIS 177

Query: 151 DLFPS---DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           D             VG+ S  KE+ S L     +   VGI+G+GGIGKTT+A  +Y+ + 
Sbjct: 178 DRLDRTILSVTTHPVGLLSRAKEVISLLGEKLVDVRIVGIYGMGGIGKTTVAKKVYNLVF 237

Query: 208 SHFEGSYFMQNIRDES---------------------EKVGGLANIHLNFERRRLSRMKV 246
             FEGS F++N+R ES                     EK+  ++   LN  R RL R ++
Sbjct: 238 HEFEGSCFLENVRKESISKGIACLQRQLLSETLKRKHEKIDNISR-GLNVIRDRLHRKRI 296

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
            IV  D+ +L+Q++ ++G  D   PGSRVIITTR   LL+    S +   +EV+EL+ +D
Sbjct: 297 FIVLDDIDELEQLNKILGNFDWLFPGSRVIITTRIKDLLQ---PSELYLQYEVEELNNDD 353

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           SL L   +AF ++HP   +++    ++ Y  G+PLAL+VLGS L G +   W S + KLK
Sbjct: 354 SLQLLRLHAFNEHHPVDNYMDCMRRIVSYVRGIPLALEVLGSSLCGQTINVWNSKLEKLK 413

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
            + + DI   LK+S D LDD E+ IFLD ACFF G ++  +M+ L+ C F    GI+ L+
Sbjct: 414 VIGNGDIHNKLKISNDSLDDTEKFIFLDIACFFIGFNKDYIMSILEDCGFFPADGINTLM 473

Query: 427 GKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
            + +V +  +NK++MHDLL++MG EIVRQES  DPG+RSRLW  ED+  V+ +
Sbjct: 474 RRCIVKVGPDNKLSMHDLLRDMGREIVRQESSTDPGERSRLWRQEDVIDVITD 526


>gi|359495276|ref|XP_002276447.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 212/516 (41%), Positives = 298/516 (57%), Gaps = 61/516 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +++VFLSFRG+D R NF  HL AAL ++ I TF  D   +G  I P+   AIE S+  +V
Sbjct: 227 EYEVFLSFRGQDTRQNFTDHLYAALYQKGIRTFRMDH-TKGEMILPTTLRAIEMSRCFLV 285

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSL------- 122
           I S+ YA S+WCL+EL +I+ES+ + G+IV PVFY V+PSD       Y  +L       
Sbjct: 286 ILSKNYAHSKWCLDELKEIMESRRQMGKIVFPVFYHVNPSDVRNQGESYGEALANHERKI 345

Query: 123 ---------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                          G +  + I    ES  I+     I  K S      +K+ L+G++ 
Sbjct: 346 PLEYTQKLRAALREVGNLSGWHIQNGFESDFIKDITRVILMKFSQKLLQVDKN-LIGMDY 404

Query: 167 IIKEIES---QLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
            ++++E    Q++   S   + VGI+G GGIGKTT+A  +Y+ I + F  + F+ N+R++
Sbjct: 405 RLEDMEEIFPQIIDPLSNNVHMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVRED 464

Query: 223 SEKVGGL----------------------ANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           S+  G L                        IH+   + RL   KVL+V  D+ DL Q++
Sbjct: 465 SKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMI--KDRLCFKKVLLVLDDVDDLNQLE 522

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G  + F PGSR+I+TTRD  LL+ H    +  ++E K+L + +++ LF  NAF QNH
Sbjct: 523 ALAGDHNWFGPGSRIIVTTRDKHLLEVHE---IDALYEAKKLDHKEAVELFCWNAFKQNH 579

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   +  LSN V+ Y NG+PL L+VLG +L G +  +WES + KL+R P+ +IQ+VLK S
Sbjct: 580 PKEDYETLSNSVVHYVNGLPLGLKVLGCFLYGKTVCQWESELQKLQREPNQEIQRVLKRS 639

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           YD LD  +Q IFLD ACFF G D+  V   LDAC F A+ GI  L  K  +TI +NKI M
Sbjct: 640 YDVLDYTQQQIFLDVACFFNGEDKDFVTRILDACNFYAESGIGVLGDKCFITILDNKIWM 699

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           HDLLQ+MG +IVRQE  KDPGK SRL +PE + +VL
Sbjct: 700 HDLLQQMGRDIVRQECPKDPGKWSRLCYPEVVNRVL 735



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 104/168 (61%), Gaps = 10/168 (5%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
             P+ I++ +L+ L   GCS LK+FP I  N+E   +L L  TAIEELPSSIG+L+ LV L
Sbjct: 950  FPSIIDMKALEILNFSGCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLL 1009

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            DL  C  LKS+S+ +C LKSL  L+LSGC KLE  PE + N+++L+ L L     E +PS
Sbjct: 1010 DLKWCKNLKSLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPS 1069

Query: 599  SMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTL 646
            S+++L  L  L L+ CK L SL    C       + TSL+TL  S  L
Sbjct: 1070 SIERLKGLVLLNLRKCKNLVSLSNGMC-------NLTSLETLIVSGCL 1110



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 1/102 (0%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF G+D RHNF  HL  AL ++ I TF D ++L RG EI+  L  AIE S+I +V
Sbjct: 27  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDHEELRRGEEIAAELLKAIEESRICVV 86

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           I S+ YA SRWCL+ELVKI+  K   GQ+V+P+FY VDPS+ 
Sbjct: 87  ILSKNYARSRWCLDELVKIMGWKKCMGQLVLPIFYQVDPSNV 128



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 79/141 (56%), Gaps = 4/141 (2%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SL T I  L SL+ L L GCS L+ FPE+  N+++L    L  T IE LPSSI  L  LV
Sbjct: 1019 SLSTSICKLKSLENLSLSGCSKLESFPEVMENMDNLKELLLDGTPIEVLPSSIERLKGLV 1078

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L+L  C  L S+S+ +CNL SL  L +SGCL+L  LP  +G+L+ L  L+       + 
Sbjct: 1079 LLNLRKCKNLVSLSNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAITQP 1138

Query: 597  PSSMKQLSKLSDLRLQNCKRL 617
            P S+  L  L  L    CK L
Sbjct: 1139 PDSIVLLRNLQVLIYPGCKIL 1159



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 94/213 (44%), Gaps = 34/213 (15%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRL 535
             SL  G+ NL SL+ L + GC  L   P    +++    L    TAI + P SI  L  L
Sbjct: 1089 VSLSNGMCNLTSLETLIVSGCLQLNNLPRNLGSLQRLAQLHADGTAITQPPDSIVLLRNL 1148

Query: 536  VDLDLTNCSGLKSVS-----------SRLCNLKSLR------------RLNLSGCLKLE- 571
              L    C  L   S               N   LR             L++S C  +E 
Sbjct: 1149 QVLIYPGCKILAPTSLGSLFSFWLLHGNSSNGIGLRLPSSFSSFRSLSNLDISDCKLIEG 1208

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
             +P  I +L SL+ L+L+  +F  IP+ + +L+ L DLRL  C+ L  +PELP     I 
Sbjct: 1209 AIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDID 1268

Query: 631  ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
            A +CT+L  L  SS++ T        F F NCS
Sbjct: 1269 AHNCTAL--LPGSSSVNTLQGLQ---FLFYNCS 1296



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 1/106 (0%)

Query: 520  TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
            +++ E+  SIG L++L+ L+L NC  L    S + ++K+L  LN SGC  L+K P   GN
Sbjct: 921  SSLLEVHPSIGKLNKLILLNLKNCKKLICFPS-IIDMKALEILNFSGCSGLKKFPNIQGN 979

Query: 580  LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            +E+L  L LA    E++PSS+  L+ L  L L+ CK L+SL    C
Sbjct: 980  MENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKNLKSLSTSIC 1025


>gi|15237080|ref|NP_192855.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|75100697|sp|O82500.1|Y4117_ARATH RecName: Full=Putative disease resistance protein At4g11170
 gi|3600057|gb|AAC35544.1| similar to several Arabidopsis thaliana disease resistance proteins
           [Arabidopsis thaliana]
 gi|332657580|gb|AEE82980.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1095

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 257/740 (34%), Positives = 379/740 (51%), Gaps = 113/740 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSS+       ++DVF SFRG+DVR+NF+SHL      + I TF DD + R + I  
Sbjct: 1   MASSSSN-----SWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGH 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L +AI  SKIS+V+FSE YASS WCL+EL++I++ K + G  V+PVFY VDPSD     
Sbjct: 56  ELRAAIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIR--K 113

Query: 121 SLGWMGIFDIPT-------------------------------SESVLIEGNVNDISKKL 149
             G  G+  + T                               +E+  I     D+ +KL
Sbjct: 114 QTGKFGMSFLETCCGKTEERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLEKL 173

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
            +  PS + + LVG+E+ I ++ES L   S     VGIWG  G+GKTTIA A+Y+    +
Sbjct: 174 -NATPSRDFNDLVGMEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHEN 232

Query: 210 FEGSYFMQNIRDESEKVG----------------------GLANIHLNFERRRLSRMKVL 247
           F  S FM+N+R+   + G                       L   HL     RL   KVL
Sbjct: 233 FNLSIFMENVRESYGEAGLDDYGLKLHLQQRFLSKLLDQKDLRVRHLGAIEERLKSQKVL 292

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           I+  D+ +++Q+  L      F   SR+++TT++ QLL +H    + H+++V   S  ++
Sbjct: 293 IILDDVDNIEQLKALAKENQWFGNKSRIVVTTQNKQLLVSHD---INHMYQVAYPSKQEA 349

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           LT+F ++AF Q+ P+     L+      A  +PLAL+VLGS+++G  +EEWE ++  LK 
Sbjct: 350 LTIFCQHAFKQSSPSDDLKHLAIEFTTLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKS 409

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKG-NDQYLVMNFLDACRFSAKIGISRLV 426
               +++KVLKV YDGL D E+++FL  AC F G ++ YL    +         G+  L 
Sbjct: 410 RLDGEVEKVLKVGYDGLHDHEKDLFLHIACIFSGQHENYLKQMIIANNDTYVSFGLQVLA 469

Query: 427 GKSLVT-ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
            KSL+    N +I MH LL+++G E+VR++SI +PGKR  L + ++   VL+ NT   T 
Sbjct: 470 DKSLIQKFENGRIEMHSLLRQLGKEVVRKQSIYEPGKRQFLMNAKETCGVLSNNTGTGTV 529

Query: 485 -GINLDSL---KELYLGGCSNLKRFPE----------ISCNIED-----LDLKETAIEEL 525
            GI+LD     +ELY+      K F E          +S  I+D     L L E  +  L
Sbjct: 530 LGISLDMCEIKEELYISE----KTFEEMRNLVYLKFYMSSPIDDKMKVKLQLPEEGLSYL 585

Query: 526 PS---------------SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           P                S      LV+L++++ S LK + S +  L++LR +NL+    L
Sbjct: 586 PQLRLLHWDAYPLEFFPSSFRPECLVELNMSH-SKLKKLWSGVQPLRNLRTMNLNSSRNL 644

Query: 571 EKLPE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPC 625
           E LP   E   L  L+ L   E   E +PSS+K L  L  L +  CK+L+ +P    LP 
Sbjct: 645 EILPNLMEATKLNRLD-LGWCESLVE-LPSSIKNLQHLILLEMSCCKKLEIIPTNINLPS 702

Query: 626 GSSIHARHCTSLKTLSNSST 645
              +H R+CT L+T    ST
Sbjct: 703 LEVLHFRYCTRLQTFPEIST 722



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 36/183 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ L+   C+ L+ FPEIS NI  L+L  TAI E+P S+   S++ ++   
Sbjct: 694 IPTNINLPSLEVLHFRYCTRLQTFPEISTNIRLLNLIGTAITEVPPSVKYWSKIDEI--- 750

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
                                    C++  K+   +     LE L L E K+ E IP  +
Sbjct: 751 -------------------------CMERAKVKRLVHVPYVLEKLCLRENKELETIPRYL 785

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
           K L +L  + +  C  + SLP+LP   S++ A +C SL+ L          S H    NF
Sbjct: 786 KYLPRLQMIDISYCINIISLPKLPGSVSALTAVNCESLQILHGH---FRNKSIH---LNF 839

Query: 660 SNC 662
            NC
Sbjct: 840 INC 842


>gi|27764546|gb|AAO23076.1| R 1 protein [Glycine max]
          Length = 902

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 216/540 (40%), Positives = 315/540 (58%), Gaps = 71/540 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEIS 59
           MA+++ S+  I    +DVFL+FRG+D R+ F  +L  ALC + I TF D DKL+ G++I+
Sbjct: 1   MAATTRSLASI----YDVFLNFRGEDTRYGFTGNLYKALCDKGIHTFFDEDKLHSGDDIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P+LS AI+ S+I+I + S+ YASS +CL+ELV IL  K + G +V+PVF+ VDPS     
Sbjct: 57  PALSKAIQESRIAITVLSQNYASSSFCLDELVTILHCKRE-GLLVIPVFHNVDPSAVRHL 115

Query: 115 DAGYCPSLG---------------W-MGIFDIP-----------TSESVLIEGNVNDISK 147
              Y  ++                W M +  +              E   I   V ++S+
Sbjct: 116 KGSYGEAMAKHQKRFKAKKEKLQKWRMALHQVADLSGYHFKDGDAYEYKFIGNIVEEVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           K+ +  P    D  VG+ S + E+   L  GS +  + +GI G+GG+GKTT+A A+Y+ I
Sbjct: 176 KI-NCAPLHVADYPVGLGSQVIEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALAVYNFI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I L       +  + RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHFQSILLSKLLGEKDITLTSWQEGASMIQHRLRRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q++ ++GR D F PGSRVIITTRD  LLK H   R    +EVK L++N 
Sbjct: 295 LLILDDVDKREQLEAIVGRSDWFGPGSRVIITTRDKHLLKYHEVERT---YEVKVLNHNA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L + NAF +      + ++ N V+ YA+G+PLAL+V+GS L G +  EWESAV   K
Sbjct: 352 ALQLLTWNAFKREKIDPIYDDVLNRVVTYASGLPLALEVIGSDLFGKTVAEWESAVEHYK 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK---IGIS 423
           R+P  +I K+LKVS+D L +E++N+FLD AC FKG     V + L A   + K   IG+ 
Sbjct: 412 RIPSDEILKILKVSFDALGEEQKNVFLDIACCFKGYKWTEVDDILRAFYGNCKKHHIGV- 470

Query: 424 RLVGKSLVTIS---NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            LV KSL+ ++   +  + MHDL+Q+MG EI RQ S ++P K  RLW P+DI+QVL  NT
Sbjct: 471 -LVEKSLIKLNCYDSGTVEMHDLIQDMGREIERQRSPEEPWKCKRLWSPKDIFQVLKHNT 529



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 38/200 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           +NL SL+ L L GCS+L+ FPEI     NI+ LDL    I+ELP S  NL  L  L L +
Sbjct: 694 LNLTSLETLQLSGCSSLEYFPEILGEMENIKALDLDGLPIKELPFSFQNLIGLCRLTLNS 753

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLES--------------- 582
           C G+  +   L  +  L    +  C     ++ E+  E++G++ S               
Sbjct: 754 C-GIIQLPCSLAMMPELSVFRIENCNRWHWVESEEGEEKVGSMISSKELWFIAMNCNLCD 812

Query: 583 ------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
                       +EYL+L+  +F  +P   K+L  L  L + +C+ LQ +  LP      
Sbjct: 813 DFFLTGSKRFTRVEYLDLSGNNFTILPEFFKELQFLRALMVSDCEHLQEIRGLPPNLEYF 872

Query: 630 HARHCTSLKTLSNSSTLLTR 649
            AR+C SL T S  S LL +
Sbjct: 873 DARNCASL-TSSTKSMLLNQ 891



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 35/167 (20%)

Query: 464 SRLWHPEDIYQVLNEN-----TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLK 518
           S+ WH      VLN +     T +P   +L +LKEL    C +L                
Sbjct: 625 SKFWH----LTVLNFDQCEFLTQIPDVSDLPNLKELSFDWCESL---------------- 664

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
             A+++   SIG L++L  L    C  L+S      NL SL  L LSGC  LE  PE +G
Sbjct: 665 -IAVDD---SIGFLNKLKKLSAYGCRKLRSFPP--LNLTSLETLQLSGCSSLEYFPEILG 718

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            +E+++ L+L     +++P S + L  L  L L +C  +Q    LPC
Sbjct: 719 EMENIKALDLDGLPIKELPFSFQNLIGLCRLTLNSCGIIQ----LPC 761


>gi|356545124|ref|XP_003540995.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1116

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 262/698 (37%), Positives = 367/698 (52%), Gaps = 86/698 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           M   S+S  MI   K++VF+SFRGKD R+NF  HL  AL R+ I TF DD KL +G  I 
Sbjct: 35  MVPCSTSPAMIK--KYEVFVSFRGKDTRNNFTDHLFGALQRKGILTFRDDTKLKKGERIL 92

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
            SL  AIEGS+I +++FS+ YASS WCL EL KIL+     G+ V+P+FY VDPS+    
Sbjct: 93  SSLMQAIEGSQIFVIVFSKNYASSTWCLRELEKILDCVIVPGKRVLPIFYDVDPSEVRKQ 152

Query: 117 ------------------------------GYCPSLGWMGIFDIPTSESVLIEGNVNDIS 146
                                                + G   +  S+   IE  V +I 
Sbjct: 153 TGDYGKAFTKHEERFKDDVEKMEEVKRWRRALTQVANFSGWDMMNKSQYDEIEKIVQEIL 212

Query: 147 KKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN 205
            KL   F S   D LVG+ES ++E+E  LL    E    VGI+G+GGIGKTT+AS +Y  
Sbjct: 213 SKLGRNFSSLPND-LVGMESPVEELEKLLLLDPVEDVRIVGIFGMGGIGKTTLASVLYHR 271

Query: 206 ISSHFEGSYFMQNIRDESEKVG--GLA----------------NIH--LNFERRRLSRMK 245
           IS  ++   F+ N+       G  G+A                N+H   N  + RL  +K
Sbjct: 272 ISHQYDACCFIDNVSKVYRDCGPTGVAKQLLHQTLNEENLQICNLHNAANLIQSRLRYVK 331

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
            LIV  ++ ++KQ + L+   +    GSR+II +RD+  LK +    V  V++V+ L+  
Sbjct: 332 TLIVLDNVDEVKQQEKLVLNREWLGAGSRIIIISRDMHNLKEYG---VTSVYKVQLLNGA 388

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           DSL LF + AF  +    G+ EL+  V+KYAN +PLA++VLGS+L G S  EW SA+ +L
Sbjct: 389 DSLKLFCKKAFNCDDIVGGYKELTYDVLKYANSLPLAIKVLGSFLCGRSVSEWRSALVRL 448

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           K  P+ DI  VL++SYDGL + E+ IFLD ACFF G ++  V   LD C F A+IGI  L
Sbjct: 449 KENPNKDILDVLQISYDGLQELEKQIFLDIACFFSGYEELYVKKVLDCCGFHAEIGIRVL 508

Query: 426 VGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQV-LNENTSLPT 484
           + KSL+  S+  I MHDLL+ +G +IV+  S  +P K SRLW P+D Y +     T+   
Sbjct: 509 LDKSLIDNSHGFIEMHDLLKVLGRKIVKGNSPNEPRKWSRLWLPKDFYDMSKTTETTNNE 568

Query: 485 GINLDSLKEL---------YLGGCSNL--------KRFPEISC---NIEDLDLKETAIEE 524
            I LD  +E+          L   SNL        K    + C    ++ L   +     
Sbjct: 569 AIVLDMSREMGILMTIEAEALSKMSNLRLLILHDVKFMGNLDCLSNKLQFLQWFKYPFSN 628

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           LPSS     +LV+L L + S +K +   +  L +LR L+LS    L K+P+  G + +LE
Sbjct: 629 LPSSF-QPDKLVELILQH-SNIKKLWKGIKYLPNLRALDLSDSKNLIKVPDFRG-VPNLE 685

Query: 585 YLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           ++ L        I  S+  L KL+ L L+NCK L SLP
Sbjct: 686 WIILEGCTKLAWIHPSVGLLRKLAFLNLKNCKNLVSLP 723



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 11/160 (6%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNL--KRFPEISCNIED---LDLKETAIEELPSSIGNLS 533
            SLP  I  L SL+ L + GC  +   +  E   N E     +++ETA++   +S   + 
Sbjct: 720 VSLPNNILGLSSLEYLNISGCPKIFSNQLLENPINEEYSMIPNIRETAMQSQSTSSSIIK 779

Query: 534 RLVDLDLTNCSGLKS----VSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           R +    +   G K+    +   L +   L  L+LS C  L ++P+ IG++ SLE LNL 
Sbjct: 780 RFIPFHFSYSRGSKNSGGCLLPSLPSFSCLHDLDLSFC-NLSQIPDAIGSILSLETLNLG 838

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
              F  +PS++ +LSKL  L L++CK+L+ LPE+P  +++
Sbjct: 839 GNKFVSLPSTINKLSKLVHLNLEHCKQLRYLPEMPTPTAL 878



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L +L+ L L    NL + P+     N+E + L+  T +  +  S+G L +L  L+L NC 
Sbjct: 658 LPNLRALDLSDSKNLIKVPDFRGVPNLEWIILEGCTKLAWIHPSVGLLRKLAFLNLKNCK 717

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKL 570
            L S+ + +  L SL  LN+SGC K+
Sbjct: 718 NLVSLPNNILGLSSLEYLNISGCPKI 743


>gi|105922306|gb|ABF81409.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus
           trichocarpa]
 gi|105922325|gb|ABF81410.1| TIR-NBS-NBS-LRR type disease resistance protein [Populus
           trichocarpa]
          Length = 1778

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 209/540 (38%), Positives = 309/540 (57%), Gaps = 55/540 (10%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           M  ++SS    P  K+DVFLSFRGKD R+NF SHL + L +  I+ ++DD+ L RG  I 
Sbjct: 56  MQKAASSSYSPPQWKYDVFLSFRGKDTRNNFTSHLYSNLEQRGIDVYMDDRGLERGKTIE 115

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P+L  AIE S+ SIV+FS  YASS WCL+ELVKI++   + G  V+PVFY VDPS     
Sbjct: 116 PALWQAIEDSRFSIVVFSRDYASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSEVADQ 175

Query: 115 -------------------DAGYCPS-----LGWMGIFDIPT-SESVLIEGNVNDISKKL 149
                              D   C S     +  +  +D+    ES  I+  V  I  KL
Sbjct: 176 KGNYKKAFIEHKEKHSGNLDKVKCWSDCLSTVANLSGWDVRNRDESQSIKKIVEYIQCKL 235

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
           S   P+ +K+ LVG++S +K +   +   + +   +GI G+GG+GKTT+A  +Y  I   
Sbjct: 236 SFTLPTISKN-LVGIDSRLKVLNEYIDEQANDTLFIGICGMGGMGKTTVARVLYDRIRWQ 294

Query: 210 FEGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVLIV 249
           F GS F+ N+R+   +  GL  +                     ++  +RRL   KVL++
Sbjct: 295 FGGSCFLANVREVFAEKDGLCRLQEQLLSEISMELPTARDSSRRIDLIKRRLRLKKVLLI 354

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ D +Q+ +L      F PGSR+IIT+R+  +L +H  +R+   +E  +L+  D+L 
Sbjct: 355 LDDVDDEEQLQMLAAEHGTFGPGSRIIITSRNKHVLDSHGVTRI---YEADKLNDKDALM 411

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS  AF ++ PA    ELS  V+ YANG+PLAL+V+GS+L      EW+SA++++  +P
Sbjct: 412 LFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIP 471

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              I  VL++S+DGL + E+ IFLD ACF KG  +  +   LD+C F A IG+  L+ KS
Sbjct: 472 DRKIIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQALIEKS 531

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD 489
           L+ +S ++I MH+LLQ+MG EIVR ES ++PG+RSRL   +D+   L ++T     I +D
Sbjct: 532 LIRVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALKDSTGKIESIFVD 591



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 173/501 (34%), Positives = 270/501 (53%), Gaps = 47/501 (9%)

Query: 161  LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            LVG++S +K +   +   +T+   +GI G+GG+GKTT+A  +Y  I   F+GS F+ N+R
Sbjct: 696  LVGIDSRLKVLNEYIDEQATDTLFIGICGMGGMGKTTVARVMYDRIRWQFQGSCFLANVR 755

Query: 221  DESEKVGGLANIH--------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
            +   +  G   +                     ++  +RRL   KVL++  D+ D +Q+ 
Sbjct: 756  EVFAEKDGRCRLQEQLLSEISMELPTARDSSRRIDLIKRRLRLKKVLLILDDVDDEEQLQ 815

Query: 261  LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            +L      F PGSR+IIT+R+  +L +H  +R+   +E  +L+  D+L LFS  AF ++ 
Sbjct: 816  MLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRI---YEADKLNDKDALMLFSWKAFKRDQ 872

Query: 321  PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
            PA    ELS  V+ YANG+PLAL+V+GS+L      EW+SA++++  +P   I  VL++S
Sbjct: 873  PAEDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRIS 932

Query: 381  YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
            +DGL + E+ IFLD ACF KG  +  +   LD+C F A IG+  L+ KSL+++S ++I M
Sbjct: 933  FDGLHELEKKIFLDIACFLKGMKKDRIARLLDSCGFHADIGMQALIEKSLISVSRDEIRM 992

Query: 441  HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD----------- 489
            H+LLQ+MG EIVR ES ++PG+RSRL   +D+   L ++T     I LD           
Sbjct: 993  HNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALEDSTEKIQSIFLDLPKAKEAQWNM 1052

Query: 490  ----SLKELYLGGCSN--LKRFPE-ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
                 + +L L    N  L   PE +S  +  L+      + LP+       LV+L ++ 
Sbjct: 1053 TAFSKMTKLRLLKIHNVDLSEGPEYLSKELRFLEWHAYPSKSLPACF-RPDELVELYMS- 1110

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIPSSM 600
            CS ++ +      L +L+ +NLS  L L   P+  G  NLESL     A     ++  S 
Sbjct: 1111 CSSIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEGCA--SLSEVHPSF 1168

Query: 601  KQLSKLSDLRLQNCKRLQSLP 621
             +  KL  + L NC  L+ LP
Sbjct: 1169 GRHKKLQLVNLVNCYSLRILP 1189



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 9/151 (5%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVDL 538
            LP+ + ++SL+   L  CS L +FP+I  NI    +L L  TAI +L SS   L+ LV L
Sbjct: 1188 LPSNLEMESLEVCTLSSCSKLDKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLL 1247

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
             + NC  L+S+ S +  LKSL+RL++S C +L+ +PE +G +ESLE  + +     + P+
Sbjct: 1248 SMNNCKNLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPT 1307

Query: 599  SMKQLSKLSDLRLQNCKRL------QSLPEL 623
            S   L  L  L  + CKR+      Q LP L
Sbjct: 1308 SFFLLKNLKVLSFKGCKRIAVNLTDQILPSL 1338



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 11/189 (5%)

Query: 481  SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
            S+P+ I  L SLK L +  CS LK  PE    +E L   D   T+I + P+S   L  L 
Sbjct: 1257 SIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLK 1316

Query: 537  DLDLTNCSGLK-----SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAE 590
             L    C  +       +   L  L SL  L+L  C L    +PE+IG L SL  LNL+ 
Sbjct: 1317 VLSFKGCKRIAVNLTDQILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLRSLNLSR 1376

Query: 591  KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTR 649
             +F  +P S+ QLS+L  L L++C  L+SLPE+P     +    C  LK + +   L + 
Sbjct: 1377 NNFISLPKSINQLSRLEKLALKDCVMLESLPEVPLKVQKVKLDGCLKLKEIPDPIKLCSL 1436

Query: 650  SSKHWDIFN 658
                +   N
Sbjct: 1437 KRSEFKCLN 1445



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 27/167 (16%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRF---PEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            SLP     D L ELY+  CS++++     +I  N++ ++L  +           +  L  
Sbjct: 1094 SLPACFRPDELVELYMS-CSSIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLES 1152

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLN-----------------------LSGCLKLEKLP 574
            L L  C+ L  V       K L+ +N                       LS C KL+K P
Sbjct: 1153 LILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRILPSNLEMESLEVCTLSSCSKLDKFP 1212

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            + +GN+  L  L L      K+ SS   L+ L  L + NCK L+S+P
Sbjct: 1213 DIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIP 1259


>gi|224126507|ref|XP_002319855.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222858231|gb|EEE95778.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1741

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 209/540 (38%), Positives = 309/540 (57%), Gaps = 55/540 (10%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           M  ++SS    P  K+DVFLSFRGKD R+NF SHL + L +  I+ ++DD+ L RG  I 
Sbjct: 6   MQKAASSSYSPPQWKYDVFLSFRGKDTRNNFTSHLYSNLEQRGIDVYMDDRGLERGKTIE 65

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P+L  AIE S+ SIV+FS  YASS WCL+ELVKI++   + G  V+PVFY VDPS     
Sbjct: 66  PALWQAIEDSRFSIVVFSRDYASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSEVADQ 125

Query: 115 -------------------DAGYCPS-----LGWMGIFDIPT-SESVLIEGNVNDISKKL 149
                              D   C S     +  +  +D+    ES  I+  V  I  KL
Sbjct: 126 KGNYKKAFIEHKEKHSGNLDKVKCWSDCLSTVANLSGWDVRNRDESQSIKKIVEYIQCKL 185

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
           S   P+ +K+ LVG++S +K +   +   + +   +GI G+GG+GKTT+A  +Y  I   
Sbjct: 186 SFTLPTISKN-LVGIDSRLKVLNEYIDEQANDTLFIGICGMGGMGKTTVARVLYDRIRWQ 244

Query: 210 FEGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVLIV 249
           F GS F+ N+R+   +  GL  +                     ++  +RRL   KVL++
Sbjct: 245 FGGSCFLANVREVFAEKDGLCRLQEQLLSEISMELPTARDSSRRIDLIKRRLRLKKVLLI 304

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ D +Q+ +L      F PGSR+IIT+R+  +L +H  +R+   +E  +L+  D+L 
Sbjct: 305 LDDVDDEEQLQMLAAEHGTFGPGSRIIITSRNKHVLDSHGVTRI---YEADKLNDKDALM 361

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS  AF ++ PA    ELS  V+ YANG+PLAL+V+GS+L      EW+SA++++  +P
Sbjct: 362 LFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIP 421

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              I  VL++S+DGL + E+ IFLD ACF KG  +  +   LD+C F A IG+  L+ KS
Sbjct: 422 DRKIIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLLDSCGFHADIGMQALIEKS 481

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD 489
           L+ +S ++I MH+LLQ+MG EIVR ES ++PG+RSRL   +D+   L ++T     I +D
Sbjct: 482 LIRVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALKDSTGKIESIFVD 541



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 173/501 (34%), Positives = 270/501 (53%), Gaps = 47/501 (9%)

Query: 161  LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            LVG++S +K +   +   +T+   +GI G+GG+GKTT+A  +Y  I   F+GS F+ N+R
Sbjct: 677  LVGIDSRLKVLNEYIDEQATDTLFIGICGMGGMGKTTVARVMYDRIRWQFQGSCFLANVR 736

Query: 221  DESEKVGGLANIH--------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
            +   +  G   +                     ++  +RRL   KVL++  D+ D +Q+ 
Sbjct: 737  EVFAEKDGRCRLQEQLLSEISMELPTARDSSRRIDLIKRRLRLKKVLLILDDVDDEEQLQ 796

Query: 261  LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            +L      F PGSR+IIT+R+  +L +H  +R+   +E  +L+  D+L LFS  AF ++ 
Sbjct: 797  MLAAEHGSFGPGSRIIITSRNKHVLDSHGVTRI---YEADKLNDKDALMLFSWKAFKRDQ 853

Query: 321  PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
            PA    ELS  V+ YANG+PLAL+V+GS+L      EW+SA++++  +P   I  VL++S
Sbjct: 854  PAEDLSELSKQVVGYANGLPLALEVIGSFLHKRGLREWKSAIDRMNDIPDRKIIDVLRIS 913

Query: 381  YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
            +DGL + E+ IFLD ACF KG  +  +   LD+C F A IG+  L+ KSL+++S ++I M
Sbjct: 914  FDGLHELEKKIFLDIACFLKGMKKDRIARLLDSCGFHADIGMQALIEKSLISVSRDEIRM 973

Query: 441  HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD----------- 489
            H+LLQ+MG EIVR ES ++PG+RSRL   +D+   L ++T     I LD           
Sbjct: 974  HNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVCDALEDSTEKIQSIFLDLPKAKEAQWNM 1033

Query: 490  ----SLKELYLGGCSN--LKRFPE-ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
                 + +L L    N  L   PE +S  +  L+      + LP+       LV+L ++ 
Sbjct: 1034 TAFSKMTKLRLLKIHNVDLSEGPEYLSKELRFLEWHAYPSKSLPACF-RPDELVELYMS- 1091

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIPSSM 600
            CS ++ +      L +L+ +NLS  L L   P+  G  NLESL     A     ++  S 
Sbjct: 1092 CSSIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLESLILEGCAS--LSEVHPSF 1149

Query: 601  KQLSKLSDLRLQNCKRLQSLP 621
             +  KL  + L NC  L+ LP
Sbjct: 1150 GRHKKLQLVNLVNCYSLRILP 1170



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 86/151 (56%), Gaps = 9/151 (5%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVDL 538
            LP+ + ++SL+   L  CS L +FP+I  NI    +L L  TAI +L SS   L+ LV L
Sbjct: 1169 LPSNLEMESLEVCTLSSCSKLDKFPDIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLL 1228

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
             + NC  L+S+ S +  LKSL+RL++S C +L+ +PE +G +ESLE  + +     + P+
Sbjct: 1229 SMNNCKNLESIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPT 1288

Query: 599  SMKQLSKLSDLRLQNCKRL------QSLPEL 623
            S   L  L  L  + CKR+      Q LP L
Sbjct: 1289 SFFLLKNLKVLSFKGCKRIAVNLTDQILPSL 1319



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 481  SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
            S+P+ I  L SLK L +  CS LK  PE    +E L   D   T+I + P+S   L  L 
Sbjct: 1238 SIPSSIRGLKSLKRLDVSDCSELKNIPENLGEVESLEEFDASGTSIRQPPTSFFLLKNLK 1297

Query: 537  DLDLTNCSGLK-----SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAE 590
             L    C  +       +   L  L SL  L+L  C L    +PE+IG L SL  LNL+ 
Sbjct: 1298 VLSFKGCKRIAVNLTDQILPSLSGLCSLEELDLCACNLGEGAVPEDIGCLSSLRSLNLSR 1357

Query: 591  KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             +F  +P S+ QLS+L  L L++C  L+SLPE+P
Sbjct: 1358 NNFISLPKSINQLSRLEKLALKDCVMLESLPEVP 1391



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 27/167 (16%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRF---PEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            SLP     D L ELY+  CS++++     +I  N++ ++L  +           +  L  
Sbjct: 1075 SLPACFRPDELVELYMS-CSSIEQLWCGCKILVNLKIINLSNSLYLINTPDFTGIPNLES 1133

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLN-----------------------LSGCLKLEKLP 574
            L L  C+ L  V       K L+ +N                       LS C KL+K P
Sbjct: 1134 LILEGCASLSEVHPSFGRHKKLQLVNLVNCYSLRILPSNLEMESLEVCTLSSCSKLDKFP 1193

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            + +GN+  L  L L      K+ SS   L+ L  L + NCK L+S+P
Sbjct: 1194 DIVGNINCLRELRLDGTAIAKLSSSFHCLAGLVLLSMNNCKNLESIP 1240



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
            HDVF SFRGK   +NF +HL+ AL +  I  +   ++    +I  SL S I+ S +SI+I
Sbjct: 1594 HDVFFSFRGKHNSNNF-THLHTALFQRGIIRY-KRQIKYLKKIESSLVSDIKESGLSIII 1651

Query: 76   FSEGYASS 83
            F+  Y S+
Sbjct: 1652 FARDYVST 1659


>gi|356532838|ref|XP_003534977.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1055

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 260/803 (32%), Positives = 384/803 (47%), Gaps = 176/803 (21%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEG 68
           N  P  K+DVF+SFRGKD+R +F+SHL  A   ++I  F+D+KL +G +I  SL  AIEG
Sbjct: 5   NTTPQIKYDVFVSFRGKDIRQDFLSHLVEAFDMKRIYAFVDNKLEKGEKIWKSLVEAIEG 64

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF 128
           S IS++IFS+GYASS WCL EL KI E K KYGQI++PVFY ++P+   Y  S  +   F
Sbjct: 65  SLISLIIFSQGYASSHWCLEELEKIHECKEKYGQIIIPVFYHLEPTHVRYQSSDAFEKAF 124

Query: 129 DIPTSESVLIEGNVNDISKKLSDL-------FPSD--------------------NKDQL 161
                +         DI KK +DL       F +D                    N  +L
Sbjct: 125 AKHGKKYESKVQQWRDILKKSADLSGIESSNFKTDAELVKKITNVVQMRLHKTHVNLKRL 184

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+   I ++E  +     +   +G+WG+GGIGKT +A  ++  + S + G  F+ N R+
Sbjct: 185 VGIGKKIADVELLIRKEPEDIRLIGLWGMGGIGKTILAEQVFIKLRSGYGGCLFLANERE 244

Query: 222 ESEKVGGLANIHLNFER-------------------RRLSRMKVLIVFYDLTDLKQIDLL 262
           +S K G L+     F                     RR+ RMKVLIV  D+ D   ++ L
Sbjct: 245 QSRKHGMLSLKEKVFSELLGNGVKIDTPNSLPDDIVRRIGRMKVLIVLDDVNDSNHLEKL 304

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           +G L  F  GSR+I+TTRD+Q+LK    ++   V+ ++E S N +L LF+ N F Q    
Sbjct: 305 LGPLGNFGSGSRIIVTTRDMQVLK---ANKADEVYPLREFSLNQALELFNLNFFNQCDDQ 361

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             +  LS  V+ YA G+PL L  L   L+  ++EEW S ++KL+++P  ++   +K+SYD
Sbjct: 362 REYDNLSKRVVNYAKGIPLVLNELAYLLRARNKEEWGSELDKLEKIPLPEVYDRMKLSYD 421

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF-------SAKIGISRLVGKSLVTIS- 434
            LD +EQ IFLD A FF  +   + +++L +          S  I + R+  K+L+T S 
Sbjct: 422 DLDPKEQQIFLDLAFFFGRSHTEIKVDYLKSLLKKDGESGDSVFIVLERMKDKALITSSK 481

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY-QVLNENTS---LPTGINLDS 490
           +N I+MHD LQ M  EIVR++S  + G  SRLW  +DI+ ++ N+  +       INL  
Sbjct: 482 DNFISMHDSLQVMAQEIVRRKS-SNTGSHSRLWDLDDIHGEMKNDKVTEAIRSIQINLPK 540

Query: 491 LKELYL-----GGCSNLKRFPEIS------------------------------CNIED- 514
           +KE  L        S+LK F +IS                              C ++  
Sbjct: 541 IKEQKLTHHIFAKMSSLK-FLKISGEDNYGNDQLILAEELQFSASELRFLCWDHCPLKSL 599

Query: 515 -----------LDLKETAIEELPSSIGNLSRLVDLDLT---------------------- 541
                      L L  + IE+L   + NL  L +++L+                      
Sbjct: 600 PKSFSKEKLVMLKLLRSKIEKLWDGVQNLVNLKEINLSGSEKLKELPDLSKATNLEVLLL 659

Query: 542 -NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP------------EEIGNLESLEYLNL 588
             CS L SV   + +L  L +L+L GC  L  L             E   NL     +++
Sbjct: 660 RGCSMLTSVHPSVFSLIKLEKLDLYGCGSLTILSSHSICSLSYLNLERCVNLREFSVMSM 719

Query: 589 AEKDF-------EKIPSSMKQLSKLSDLRLQ-----------------------NCKRLQ 618
             KD        +++PSS +Q SKL  L L+                       NC  LQ
Sbjct: 720 NMKDLRLGWTKVKELPSSFEQQSKLKLLHLKGSAIERLPSSFNNLTQLLHLEVSNCSNLQ 779

Query: 619 SLPEL-PCGSSIHARHCTSLKTL 640
           ++PEL P   +++A+ CTSL TL
Sbjct: 780 TIPELPPLLKTLNAQSCTSLLTL 802



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 27/149 (18%)

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDL-----------------------DLKETAIEELP 526
           SL  L L  C NL+ F  +S N++DL                        LK +AIE LP
Sbjct: 699 SLSYLNLERCVNLREFSVMSMNMKDLRLGWTKVKELPSSFEQQSKLKLLHLKGSAIERLP 758

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
           SS  NL++L+ L+++NCS L+++      LK+   LN   C  L  LPE   ++++L  +
Sbjct: 759 SSFNNLTQLLHLEVSNCSNLQTIPELPPLLKT---LNAQSCTSLLTLPEISLSIKTLSAI 815

Query: 587 NLAEKDFEKIPSSMKQLSK-LSDLRLQNC 614
           +    +   + S+++QL K    +R  NC
Sbjct: 816 DCKSLETVFLSSAVEQLKKNRRQVRFWNC 844


>gi|357513265|ref|XP_003626921.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520943|gb|AET01397.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 2300

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 235/685 (34%), Positives = 354/685 (51%), Gaps = 109/685 (15%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
            +DVF++FRG D R  F+SHL  AL    I TF+D++ L +G E+ P L  AI+GS+I+IV
Sbjct: 1190 YDVFINFRGADTRKTFISHLYTALTNAGINTFLDNENLQKGKELGPELIRAIQGSQIAIV 1249

Query: 75   IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------------------- 114
            +FS+ Y  SRWCL+EL +I+E K   GQ+V+PVFY + PS                    
Sbjct: 1250 VFSKNYVHSRWCLSELKQIMECKANDGQVVMPVFYCITPSNIRQYAVTRFSETTLFFDEL 1309

Query: 115  --------DAGYCPSLGWMGIFDIP--TSESVLIEGNVNDISKKLSDLFPSDNK-----D 159
                    DA Y    GW    D+   ++ES +++  V+ + K L      DNK     D
Sbjct: 1310 VPFMNTLQDASYLS--GW----DLSNYSNESKVVKEIVSQVLKNL------DNKYLPLPD 1357

Query: 160  QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
              VG+E   ++    L   +     VGIWG+GGIGK+TIA  IY+++   FE   F+ NI
Sbjct: 1358 FQVGLEPRAEKSIRFLRQNTRGVCLVGIWGMGGIGKSTIAKVIYNDLCYEFENQSFLANI 1417

Query: 220  RDESEKVGGLANIHLNFE---------------------RRRLSRMKVLIVFYDLTDLKQ 258
            R+  EK  G  ++   F                      +++L   ++L V  D+++L+Q
Sbjct: 1418 REVWEKDRGRIDLQEQFLSDILKTRKIKVLSVEQGKTMIKQQLRAKRILAVLDDVSELEQ 1477

Query: 259  IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
             D L  R +   PGS +IITTRD+++L       V  ++E +EL+ ++SL LF ++AF +
Sbjct: 1478 FDALCQR-NSVGPGSIIIITTRDLRVLNILE---VDFIYEAEELNASESLELFCKHAFRK 1533

Query: 319  NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
              P   FL LS  V+ Y  G+PLAL+VLGSYL    ++EW S ++KL+++P+  I ++LK
Sbjct: 1534 AIPTQDFLILSRDVVAYCGGIPLALEVLGSYLFKRKKQEWRSVLSKLEKIPNDQIHEILK 1593

Query: 379  VSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NN 436
            +S+DGL D  E+NIFLD  CFF G D+  V   L+ C  +A IGI+ L+ +SL+ +  N 
Sbjct: 1594 ISFDGLKDRMEKNIFLDVCCFFIGKDRAYVTKILNGCGLNADIGITVLIERSLIKVEKNK 1653

Query: 437  KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYL 496
            K+ MH LL++MG EIVR+ S ++P K +RLW  ED+  VL +                Y 
Sbjct: 1654 KLGMHALLRDMGREIVRESSPEEPEKHTRLWCHEDVVNVLAD----------------YT 1697

Query: 497  GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
            G  +           IE L +K      +        +++ L L     ++ +    C  
Sbjct: 1698 GTKA-----------IEGLVMKLPKTNRVCFDTIAFEKMIRLRLLQLDNVQVIGDYKCFP 1746

Query: 557  KSLRRLNLSGCLKLEKLPEEI--GNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
            K LR L+  G   L+  PE     NL ++E  + NLA+    K P  ++ L  L+    +
Sbjct: 1747 KHLRWLSWQG-FPLKYTPENFYQKNLVAMELKHSNLAQ--VWKKPQLIEGLKILNLSHSK 1803

Query: 613  NCKRLQSLPELPCGSSIHARHCTSL 637
            N KR     +LP    +  + C SL
Sbjct: 1804 NLKRTPDFSKLPNLEKLIMKDCQSL 1828



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            ++ LK L L    NLKR P+ S   N+E L +K+  ++ E+  SIG+L  L+ L+L +C+
Sbjct: 1791 IEGLKILNLSHSKNLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDLKNLLMLNLKDCT 1850

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             L ++   +  L+ +  L LSGC K++KL E+I  +ESL  L  A    ++ P S+
Sbjct: 1851 SLGNLPREIYQLRRVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSI 1906


>gi|451798988|gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 258/689 (37%), Positives = 357/689 (51%), Gaps = 93/689 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R +F  HL+ ALC++ I TF+DD+L RG +ISP+L +AIE S+ SI+
Sbjct: 21  KYDVFLSFRGEDTRKSFTDHLHTALCQKGINTFMDDQLRRGEQISPALLNAIEESRFSII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           IFS+ YASS WCL+ELVKIL+     G   +PVFY ++PS        +  +        
Sbjct: 81  IFSDNYASSSWCLDELVKILDCIKVMGHRALPVFYNLNPSHVKKQTGSFAEAFAKHEQEY 140

Query: 124 ---------WM-GIFDIPT---------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W   + ++ T          ES LIE  V DI  KL    PS  K  LVG+
Sbjct: 141 REKMEKVVKWREALTEVATISGWDSRDRHESKLIEEIVRDIWNKLVGTSPSYMKG-LVGM 199

Query: 165 ESIIKEIESQL-------------LSGSTEFN-----------TVGIWGIGGIGKTTIAS 200
           ES ++ ++S L               G+ E N            +G+W          A 
Sbjct: 200 ESRLEAMDSLLSMFSEPDRNPTSARKGNKESNDSYKSHPQQRLKIGLW----------AQ 249

Query: 201 AIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
            + S +S H         +  E +   GL N  +NF +  L   KVLI+  D+   +Q++
Sbjct: 250 NLGSKLSPH--------KVEWERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLE 301

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G  + F  GSR+IITTRD  LL       V  ++EVKEL  +++L LF   AF   H
Sbjct: 302 DLAGYNNWFGLGSRIIITTRDRHLLTCQE---VDAIYEVKELDNDEALKLFCLYAFRHRH 358

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
               F +L    + Y +G+PLAL+VLGS L      EWES +NKLK+ P+ ++Q VLK S
Sbjct: 359 GTEDFRQLCGHALDYTSGLPLALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNVLKTS 418

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           ++GLDD EQNIFLD A F+KG+D+  V + LD+C F   IGI  L  KSL+TIS NK+ M
Sbjct: 419 FEGLDDNEQNIFLDIAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCM 478

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKEL-- 494
           HDLLQEMG EIVRQ+S + PG+RSRL   EDI  VL  NT      GI LD    KEL  
Sbjct: 479 HDLLQEMGWEIVRQKS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSESKELNF 537

Query: 495 YLGGCSNLKRFPEIS-CNIE-DLDLKETAIEELPSSIGNL-SRLVDLDLTNCSGLKSVSS 551
            +   + +KR   +  CN++ D  L   + +EL +   ++ +    L   N   L   S 
Sbjct: 538 SIDAFTKMKRLRLLKICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSK 597

Query: 552 RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
            L N  +LR L   G   L+  P    + E L  LN+     +++    K   KL  ++L
Sbjct: 598 FLSN--NLRDLYWHG-YPLKSFPSNF-HPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKL 653

Query: 612 QNCKRLQSLPE---LPCGSSIHARHCTSL 637
            + + L   P+   +P    +  + CTSL
Sbjct: 654 SHSQHLTKTPDFSGVPNLRRLILKGCTSL 682



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 100/164 (60%), Gaps = 10/164 (6%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPE+  N+E   +L L+ TAI+ LP SI NL+ L  
Sbjct: 708 SFSSSIHMESLQILTLSGCSKLKKFPEVQGNMEHLPNLSLEGTAIKGLPLSIENLTGLAL 767

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C  L+S+   +  LKSL+ L LS C +L+KLPE   N+ESL  L L      ++P
Sbjct: 768 LNLKECKSLESLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELP 827

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           SS+  L+ L  L L+NCK+L SLP+  C         TSL TL+
Sbjct: 828 SSIGCLNGLVFLNLKNCKKLASLPQSFC-------ELTSLGTLT 864



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 108/208 (51%), Gaps = 27/208 (12%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
             SLP     L SL  L L GCS LK  P+    + C + +L+   + I+E+P SI  L+ 
Sbjct: 848  ASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQC-LAELNADGSGIQEVPPSITLLTN 906

Query: 535  LVDLDLTNCSGLKSVSSRLC-----------------NLKSLRRLNLSGC-LKLEKLPEE 576
            L  L L  C G  S S  +                   L SLR L L  C L    LP +
Sbjct: 907  LQKLSLAGCKGGDSKSRNMVFSFHSSPTEELRLPSFSGLYSLRVLILQRCNLSEGALPSD 966

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
            +G++ SLE L+L+   F  IP+S+  LS+L  L L+ CK LQSLPELP    S++A  CT
Sbjct: 967  LGSIPSLERLDLSRNSFITIPASLSGLSRLRSLTLEYCKSLQSLPELPSSVESLNAHSCT 1026

Query: 636  SLKTLSNSSTLLTRSSKHWDI-FNFSNC 662
            SL+T S SS   T S K  D+ FNF+NC
Sbjct: 1027 SLETFSCSSGAYT-SKKFGDLRFNFTNC 1053



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/139 (43%), Positives = 82/139 (58%), Gaps = 4/139 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP  I  L SLK L L  C+ LK+ PEI  N+E   +L L  + I ELPSSIG L+ LV
Sbjct: 778 SLPRSIFKLKSLKTLILSNCTRLKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLV 837

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L NC  L S+    C L SL  L L GC +L++LP+++G+L+ L  LN      +++
Sbjct: 838 FLNLKNCKKLASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEV 897

Query: 597 PSSMKQLSKLSDLRLQNCK 615
           P S+  L+ L  L L  CK
Sbjct: 898 PPSITLLTNLQKLSLAGCK 916



 Score = 39.7 bits (91), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 489 DSLKELYLGGCSNLKRFPE--ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           ++L++LY  G   LK FP       + +L++  + +++L        +L  + L++   L
Sbjct: 601 NNLRDLYWHGYP-LKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHL 659

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
            + +     + +LRRL L GC  L ++   IG L+ L +LNL      K  SS   +  L
Sbjct: 660 -TKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESL 718

Query: 607 SDLRLQNCKRLQSLPEL 623
             L L  C +L+  PE+
Sbjct: 719 QILTLSGCSKLKKFPEV 735


>gi|356503065|ref|XP_003520332.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 237/707 (33%), Positives = 356/707 (50%), Gaps = 107/707 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF++FRG+D R  FV H+  AL    I TFID++  +       L +AIEGS+I+IV+
Sbjct: 19  YDVFINFRGEDTRKKFVCHIYKALSNAGINTFIDEENIQKGMTLDELMTAIEGSQIAIVV 78

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------- 123
           FS+ Y  S WCL EL KI+E    YGQ VVPVFY +DPS     +  +  +L        
Sbjct: 79  FSKTYTESTWCLRELQKIIECHENYGQRVVPVFYHIDPSHIRHQEGDFGSALNAVAERRH 138

Query: 124 -----------WMGIFDIPT-----------SESVLIEGNVNDISKKLS-DLFPSDNKDQ 160
                      W  +    T           +++ L++  VND+  KL  ++ P      
Sbjct: 139 SGEDLKSALSNWKRVLKKATDFSGWNERDFRNDAELVKEIVNDVLTKLEYEVLPITRFP- 197

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            VG+ES ++E+  + +  +T    +GIWG+GG GKTT A AIY+ I   F    F+++IR
Sbjct: 198 -VGLESQVQEV-IRFIETTTYSCIIGIWGMGGSGKTTTAKAIYNQIHRSFMDKSFIEDIR 255

Query: 221 DESEKVGGL---------------ANIH-----LNFERRRLSRMKVLIVFYDLTDLKQID 260
           +  ++  G                  IH           RLS+ ++LIV  D+    Q+ 
Sbjct: 256 EACKRDRGQIRLQKQLLSDVLKTKVEIHSIGRGTTVIENRLSKKRLLIVLDDVNKSGQLK 315

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G L     GS +IITTRD  L     G +V +V E+KE+  N+SL L S +AF +  
Sbjct: 316 ALCGNLQWIGEGSVIIITTRDKHLFT---GLKVDYVHEMKEMHANESLELLSWHAFREAK 372

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   F EL+  V+ Y  G+PLAL+ LG YL   +  EW SA++KL+  P+  +Q++LK+S
Sbjct: 373 PKEDFNELARNVVAYCGGLPLALEDLGLYLTNRTTNEWRSALSKLETTPNPHVQEILKIS 432

Query: 381 YDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKI 438
           +DGL+DE E++IFLD  CFF G D   V   L+ C   +  GI  L+ +SL+ +  NNK+
Sbjct: 433 FDGLNDEKEKDIFLDVCCFFIGKDIAYVTEILNGCGLHSDCGIPVLIDRSLIKVEKNNKL 492

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT--------SLPTGIN--- 487
            MH+L+QEMG EI+RQ S K PGKRSRLW   ++  VL +NT        +L   +N   
Sbjct: 493 GMHNLVQEMGREIIRQSSRKKPGKRSRLWFNVEVVDVLTKNTGTEVVEGLALKFHVNSRN 552

Query: 488 ------LDSLKELYLGGCSNLKR------------------FPEISC-------NIEDLD 516
                  + ++ L L    N++                   FP           N+  +D
Sbjct: 553 CFKTCAFEKMQRLRLLQLENIQLAGDYGYLSKELRWMCWQGFPSKYIPKNFNMENVIAID 612

Query: 517 LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
           LK + +  +     +L+ L  L+L++   L   +     L++L +L L  C +L K+ + 
Sbjct: 613 LKRSNLRLVWKEPQDLASLKILNLSHSKYLTE-TPDFSKLRNLEKLILKDCPRLCKVHKS 671

Query: 577 IGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           IG+L +L  LNL +      +P S+ +L  +  L L  C ++  L E
Sbjct: 672 IGDLRNLILLNLKDCTSLGNLPRSVYKLKSVKTLILSGCSKIDKLEE 718



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 3/128 (2%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNC 543
           +L SLK L L     L   P+ S   N+E L LK+   + ++  SIG+L  L+ L+L +C
Sbjct: 627 DLASLKILNLSHSKYLTETPDFSKLRNLEKLILKDCPRLCKVHKSIGDLRNLILLNLKDC 686

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           + L ++   +  LKS++ L LSGC K++KL E+I  +ESL  L       +++P S+  L
Sbjct: 687 TSLGNLPRSVYKLKSVKTLILSGCSKIDKLEEDIVQMESLTTLIAKNVVVKEVPFSIVTL 746

Query: 604 SKLSDLRL 611
             +  + L
Sbjct: 747 KSIEYISL 754


>gi|358248980|ref|NP_001239717.1| TMV resistance protein N-like [Glycine max]
 gi|223452611|gb|ACM89632.1| candidate disease-resistance protein [Glycine max]
          Length = 1029

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 216/540 (40%), Positives = 315/540 (58%), Gaps = 71/540 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEIS 59
           MA+++ S+  I    +DVFL+FRG+D R+ F  +L  ALC + I TF D DKL+ G++I+
Sbjct: 1   MAATTRSLASI----YDVFLNFRGEDTRYGFTGNLYKALCDKGIHTFFDEDKLHSGDDIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P+LS AI+ S+I+I + S+ YASS +CL+ELV IL  K + G +V+PVF+ VDPS     
Sbjct: 57  PALSKAIQESRIAITVLSQNYASSSFCLDELVTILHCKRE-GLLVIPVFHNVDPSAVRHL 115

Query: 115 DAGYCPSLG---------------W-MGIFDIP-----------TSESVLIEGNVNDISK 147
              Y  ++                W M +  +              E   I   V ++S+
Sbjct: 116 KGSYGEAMAKHQKRFKAKKEKLQKWRMALHQVADLSGYHFKDGDAYEYKFIGNIVEEVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           K+ +  P    D  VG+ S + E+   L  GS +  + +GI G+GG+GKTT+A A+Y+ I
Sbjct: 176 KI-NCAPLHVADYPVGLGSQVIEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALAVYNFI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I L       +  + RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHFQSILLSKLLGEKDITLTSWQEGASMIQHRLRRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q++ ++GR D F PGSRVIITTRD  LLK H   R    +EVK L++N 
Sbjct: 295 LLILDDVDKREQLEAIVGRSDWFGPGSRVIITTRDKHLLKYHEVERT---YEVKVLNHNA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L + NAF +      + ++ N V+ YA+G+PLAL+V+GS L G +  EWESAV   K
Sbjct: 352 ALQLLTWNAFKREKIDPIYDDVLNRVVTYASGLPLALEVIGSDLFGKTVAEWESAVEHYK 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK---IGIS 423
           R+P  +I K+LKVS+D L +E++N+FLD AC FKG     V + L A   + K   IG+ 
Sbjct: 412 RIPSDEILKILKVSFDALGEEQKNVFLDIACCFKGYKWTEVDDILRAFYGNCKKHHIGV- 470

Query: 424 RLVGKSLVTIS---NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            LV KSL+ ++   +  + MHDL+Q+MG EI RQ S ++P K  RLW P+DI+QVL  NT
Sbjct: 471 -LVEKSLIKLNCYDSGTVEMHDLIQDMGREIERQRSPEEPWKCKRLWSPKDIFQVLKHNT 529



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 6/129 (4%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           +NL SL+ L L GCS+L+ FPEI     NI+ LDL    I+ELP S  NL  L  L L +
Sbjct: 695 LNLTSLETLQLSGCSSLEYFPEILGEMENIKALDLDGLPIKELPFSFQNLIGLCRLTLNS 754

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN--LESLEYLNLAEKDFEKIPSSM 600
           C G+  +   L  +  L    +  C +   +  E G+     +EYL+L+  +F  +P   
Sbjct: 755 C-GIIQLPCSLAMMPELSVFRIENCNRWHWVESEEGSKRFTRVEYLDLSGNNFTILPEFF 813

Query: 601 KQLSKLSDL 609
           K+L  L  L
Sbjct: 814 KELQFLRAL 822



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 35/170 (20%)

Query: 461 GKRSRLWHPEDIYQVLNEN-----TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL 515
           G   + WH      VLN +     T +P   +L +LKEL    C +L             
Sbjct: 623 GPSKKFWH----LTVLNFDQCEFLTQIPDVSDLPNLKELSFDWCESL------------- 665

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
                A+++   SIG L++L  L    C  L+S      NL SL  L LSGC  LE  PE
Sbjct: 666 ----IAVDD---SIGFLNKLKKLSAYGCRKLRSFPP--LNLTSLETLQLSGCSSLEYFPE 716

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            +G +E+++ L+L     +++P S + L  L  L L +C  +Q    LPC
Sbjct: 717 ILGEMENIKALDLDGLPIKELPFSFQNLIGLCRLTLNSCGIIQ----LPC 762


>gi|227438267|gb|ACP30623.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1262

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 244/726 (33%), Positives = 369/726 (50%), Gaps = 116/726 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSS   +  + K+DVFLSFRG+DVR  F+SH+   L R+ I  F+DDK+ RG  + P
Sbjct: 1   MASSSS---LACNSKYDVFLSFRGEDVRKGFLSHVRKGLERKGIIAFVDDKIERGESVGP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------ 114
            L  AI  S++++V+ S  YASS WCL+ELV+I++ + +  Q V+ +FY VDPS      
Sbjct: 58  VLVGAIRQSRVAVVLLSRNYASSSWCLDELVEIMKCRKEDQQKVMTIFYEVDPSHVRKQT 117

Query: 115 -DAGYCPSLGWMG------------IFDIP----------TSESVLIEGNVNDISKKLSD 151
            D G       MG            + D+            +E+ +I+   +D++  L  
Sbjct: 118 GDFGKAFEKTCMGKTEEVKQEWRQALEDVAGIAGYHSSNSDNEAEMIDKVASDVTAVLG- 176

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
             PS + D  VGV + I EI+S+L+  S +   + + G  GIGKTT A+ +Y+ +S  F 
Sbjct: 177 FTPSKDFDDFVGVVAQITEIKSKLILQSEQVKMIVLVGPAGIGKTTTATVLYNQLSPGFP 236

Query: 212 GSYFMQNIRDESEKVGG-------------LANI---------HLNFERRRLSRMKVLIV 249
            S F++NIR   EK  G             L+ I         HL   + +LS  +VL+V
Sbjct: 237 FSTFLENIRGSYEKPCGNDYQLKLRLQKKMLSQIFNQSDIEVGHLRVAQEKLSDKQVLVV 296

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             ++    Q++    +   F PGS +IITT D +LLK  R   + H++E+K  + ++SL 
Sbjct: 297 LDEVDSWWQLEATAYQRGWFGPGSIIIITTEDRKLLKTLRLG-IDHIYEMKFPTSDESLQ 355

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +F + AFGQ+ P  GF EL+  V   A  +PL L+V+GSYL+GMS E+W  A+ +L+   
Sbjct: 356 IFCQYAFGQDSPYDGFEELAREVTWLAGNLPLGLRVMGSYLRGMSREQWIDALPRLRSSL 415

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI----GISRL 425
             +I+  L+ SYDGL D+++ +FL  ACFF    QY  +  + +C   +K+    GI  L
Sbjct: 416 DREIESTLRFSYDGLSDKDKALFLHIACFF----QYFKVESVKSCLKKSKLDVNHGIQVL 471

Query: 426 VGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG 485
             +SL++I    + MH LLQ+MG  IV++ES+K+PGKR  LW   +I ++L++NT     
Sbjct: 472 ADRSLISIEGGYVKMHSLLQKMGRGIVKKESLKEPGKREFLWSTSEIIELLDKNTGTGNV 531

Query: 486 INL-----------------------DSLKEL-YLGGCSNLKRFPE-ISCNIEDLDLKE- 519
           I L                       D +  L +L   S+  R PE ++C  E L L   
Sbjct: 532 IALSLRTYENSENSKRGKIQISKSAFDEMNNLQFLKVKSDNVRIPEGLNCLPEKLRLIHW 591

Query: 520 ------------------------TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
                                   +  E+L   I  L  L  +DL N   LK +   L  
Sbjct: 592 DNCPLRFWPSKFSAKFLVELIMPISKFEKLWEGIKPLYCLKLMDLRNSLYLKEIPD-LSK 650

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNC 614
             SL +L+L+ C  L +L   IGN   L   NL+  +  +++PSSM +L  L +L L +C
Sbjct: 651 ATSLEKLDLTDCESLLELTSSIGNASKLRVCNLSYCRLLKELPSSMGRLINLEELNLSHC 710

Query: 615 KRLQSL 620
             L+  
Sbjct: 711 VGLKEF 716



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 45/188 (23%)

Query: 501 NLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
           +++ FP +  +I +L L  T IEE+P  I  L RL  L +  C  LK +S ++  L++L 
Sbjct: 761 SIRDFPNVPDSIVELVLSRTGIEEVPPWIEKLFRLRKLIMNGCEKLKKISPKVSKLENLE 820

Query: 561 RLNLSGC---------------------LKLEKLPEEIGNLESLEYLN--------LAEK 591
            L LS C                      K+E  P+   +L+ +   N        L EK
Sbjct: 821 LLFLSFCDILLDGDYDSPLSYCYDDVFEAKIEWGPDLKRSLKLISDFNIDDILPICLPEK 880

Query: 592 D-------------FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTS 636
                         F+ IP  ++ L  LS L +  C+ L +LP LP GS  SI      S
Sbjct: 881 ALKSSISVSLCGACFKTIPYCIRSLRGLSKLDITQCRNLVALPPLP-GSLLSIVGHGYRS 939

Query: 637 LKTLSNSS 644
           L+++ +SS
Sbjct: 940 LESIDSSS 947


>gi|225465768|ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1179

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 249/689 (36%), Positives = 357/689 (51%), Gaps = 95/689 (13%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVI 75
           DVFLSFRG+D R  F  HL++AL +++I TF DD+ L+RG EI  S+  AIE S++ IV+
Sbjct: 17  DVFLSFRGEDTRFTFTDHLHSALRQKRIRTFRDDEGLDRGEEIGSSILKAIEESRMYIVV 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG----------- 123
           FS  YA S+WCL+EL KI+E K + GQ VVPVFY V+PSD      S G           
Sbjct: 77  FSNTYAHSKWCLDELAKIMECKIQKGQTVVPVFYHVEPSDVRNQTGSFGEAFDKYQKVPE 136

Query: 124 -----WMGIFDIPTS----------ESVLIEGNVNDI-SKKLSDLFPSDNKDQLVGVESI 167
                W        +          ES  I+  V +I S+ L  L  SD   +LVG+E  
Sbjct: 137 HKLMRWKAALRHAANLSGWHVQHGYESQAIQRIVQNILSRNLKLLSASD---KLVGMERH 193

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES---- 223
            KE+ S +   S +   +GI GI GIGKTT+A A+Y+ I   F+G+ F+ N         
Sbjct: 194 RKEMASLISIDSNDVRMIGINGIDGIGKTTLAKAVYNQIVHQFDGASFLSNFSSHEMNLL 253

Query: 224 ------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
                       E +  + +I    +  R  L   KVL+V  D+    Q++ L+     F
Sbjct: 254 QLQKQLLRDILGEDIPRITDISKGAHVIRDMLWSKKVLVVLDDVDGTGQLEFLVIN-RAF 312

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
            PGSR+I+T+R   LL    G  +  ++EVKEL+  +++ LFS +AF  N P  GF+ LS
Sbjct: 313 GPGSRIIVTSRHKYLLA---GYGLDALYEVKELNCKEAIQLFSLHAFHMNSPQKGFMNLS 369

Query: 330 NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQ 389
             ++ Y  G+P+AL+VLGS+L G  + EWES + +L++ P+  IQ VL   + GLD   +
Sbjct: 370 RWIVDYCKGLPIALEVLGSHLFGKKKFEWESVLQRLEKRPNKQIQNVLMRGFQGLDGCHR 429

Query: 390 NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG 449
            IFLD ACFFKG D   V   L+AC F +K+GI  L   SL++I +NK+ MHDL+Q+ G 
Sbjct: 430 EIFLDVACFFKGEDLDFVERILEACNFYSKLGIKVLTDNSLISILDNKLLMHDLIQKSGW 489

Query: 450 EIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGINLDSL--KELYLGGCSNLK-- 503
           EIVR++   +PGK SRLW PED+Y VL  NT      GI L+     E++L   +  K  
Sbjct: 490 EIVREQYHTEPGKWSRLWDPEDVYHVLTTNTGTKRIEGIFLNMFVSNEIHLTSDAFKKMT 549

Query: 504 --RFPEISCNIED-----------------------LDLKETAIEELPSSIGNLSRLVDL 538
             R   +  N+E+                       L      +E LPS+     +LV+L
Sbjct: 550 RLRLLRVYQNVENNSIVSNTVHLPHDFKFPSHELRYLHWDGWTLESLPSNFDGW-KLVEL 608

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD----FE 594
            L + S LK +  +   L  L  +NL     L + P    NL     + L   D      
Sbjct: 609 SLKH-SSLKHLWKKRKCLPKLEVINLGNSQHLMECP----NLSFAPRVELLILDGCTSLP 663

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           ++  S+ +L +L+ L ++NCK+L   P +
Sbjct: 664 EVHPSVTKLKRLTILNMKNCKKLHYFPSI 692



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 5/138 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI----SCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            P+   L+SLK L L GCS L +FPEI     C ++ L L  T+++ELP SI ++  L  
Sbjct: 689 FPSITGLESLKVLNLSGCSKLDKFPEIMEVMEC-LQKLLLDGTSLKELPPSIVHVKGLQL 747

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L  C  L+S+ + +C+L+SL  L +SGC KL KLPE++G L+ L  L        + P
Sbjct: 748 LNLRKCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPP 807

Query: 598 SSMKQLSKLSDLRLQNCK 615
            S+  L  L +L  + CK
Sbjct: 808 LSLFHLRNLKELSFRGCK 825



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC 554
           +L  C NL   P +   I D     T++ E+  S+  L RL  L++ NC  L    S + 
Sbjct: 638 HLMECPNLSFAPRVELLILD---GCTSLPEVHPSVTKLKRLTILNMKNCKKLHYFPS-IT 693

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
            L+SL+ LNLSGC KL+K PE +  +E L+ L L     +++P S+  +  L  L L+ C
Sbjct: 694 GLESLKVLNLSGCSKLDKFPEIMEVMECLQKLLLDGTSLKELPPSIVHVKGLQLLNLRKC 753

Query: 615 KRLQSLPELPC 625
           K L+SLP   C
Sbjct: 754 KNLRSLPNSIC 764



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 28/189 (14%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP  I +L SL+ L + GCS L + PE    ++    L    TAI + P S+ +L  L 
Sbjct: 758 SLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLK 817

Query: 537 DLDLTNCSGLKSVS----------------------SRLCNLKSLRRLNLSGC-LKLEKL 573
           +L    C G  S S                        L  L SL+ L+LSGC L    +
Sbjct: 818 ELSFRGCKGSTSNSWISSLLFRLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDRSI 877

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-IHAR 632
            + +G+L  LE LNL+  +   +P+ + +LS L  L +  CK LQ + +LP     + A 
Sbjct: 878 NDNLGHLSFLEELNLSRNNLVTVPAEVNRLSHLRVLSVNQCKSLQEISKLPPSIKLLDAG 937

Query: 633 HCTSLKTLS 641
            C SL++LS
Sbjct: 938 DCISLESLS 946


>gi|357509247|ref|XP_003624912.1| TMV resistance protein N [Medicago truncatula]
 gi|355499927|gb|AES81130.1| TMV resistance protein N [Medicago truncatula]
          Length = 2106

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 257/738 (34%), Positives = 376/738 (50%), Gaps = 119/738 (16%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
            +DVFLSFRG D R  F+SHL  AL    I  F DD ++ RG++IS SL  AIE SKISIV
Sbjct: 1025 YDVFLSFRGNDTRAKFISHLYTALENAGIYVFRDDDEIQRGDQISASLLQAIEQSKISIV 1084

Query: 75   IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG---------- 123
            + S  YA SRWC+ EL  I+ +    G +VVPVFY +DPS+        G          
Sbjct: 1085 VLSRSYADSRWCMLELENIMGNSRTQGMVVVPVFYEIDPSEVRNQSGKFGEDFESLLLRT 1144

Query: 124  ---------W-MGIFDIPTSESVLIEGNVN---DISKKL---------SDLFPSDNKDQL 161
                     W   + ++  +  V+I  + N   DI K +         +DLF +D+    
Sbjct: 1145 SVDTLKLSNWKTALAEVGGTAGVVIINSRNESEDIRKIVDHVTNLPDRTDLFVADHP--- 1201

Query: 162  VGVESIIKEIESQLLSG--STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            VGV+S ++++  QLL+   S +   +GIWG+GGIGKTTIA A Y+ I   FE   F+ N+
Sbjct: 1202 VGVDSRVQDV-IQLLNNQESKDPLLLGIWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNV 1260

Query: 220  RDESEKVGGLANIH------------LNFE---------RRRLSRMKVLIVFYDLTDLKQ 258
            R+  E+  G+ ++             +  E         + RL   ++ +V  D+  + Q
Sbjct: 1261 REVWEQDNGVVSLQQRLLSDIYKTTKIKIETVESGKMILQERLRHKRIFLVLDDVNKVDQ 1320

Query: 259  IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
            ++ L G  + F  GSR++ITTRD  LL      +V +V+ +KE+  N+SL LFS +AF Q
Sbjct: 1321 LNALCGSHEWFGEGSRIMITTRDDDLLSR---LKVDYVYRMKEMDGNESLELFSWHAFKQ 1377

Query: 319  NHPAAGFLELSNIVIKYANGVPLALQVLGSY-LKGMSEEEWESAVNKLKRMPHMDIQKVL 377
              P  GF +LS  V+ Y+ G+P+ALQV+GS+ L    ++EW+S + KLK +P+ ++ + L
Sbjct: 1378 PIPIEGFGDLSTDVVMYSGGLPIALQVIGSFLLTRRRKKEWKSVLEKLKLIPNDEVLEKL 1437

Query: 378  KVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
            K+S+DGL DD+ + IFLD A FF G DQ  V   L+ C   A IGIS LV KSLVT+   
Sbjct: 1438 KISFDGLSDDDVKEIFLDIAFFFIGMDQEEVTTILEGCGHFADIGISLLVQKSLVTVDRK 1497

Query: 436  NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL--PTGINL----- 488
            NKI MHDLL++MG EIVR++SI+   + SRLW  ED+  VL++ T      G+ L     
Sbjct: 1498 NKIGMHDLLRDMGREIVRKKSIEISKEPSRLWRYEDVDSVLSKATRALDVKGLTLKMSRM 1557

Query: 489  --------------DSLKELYLGGCSNLKRFPEISCNIEDL------------------- 515
                          + LK L L G      +  +S +I  L                   
Sbjct: 1558 DSRTYMETKDFEKINKLKFLQLAGVQLEGNYKYLSRDIRWLCWHGFPLKYTPEEFHQEHL 1617

Query: 516  ---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
               DLK + +E++      L  L  L+L++   LK  +     L +L +L L  C  L  
Sbjct: 1618 VAVDLKYSHLEQVWKKSQLLKELKFLNLSHSHNLKQ-TPDFSYLPNLEKLILKDCPNLSS 1676

Query: 573  LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
            +   IGNL+ +  +NL +     ++P S+ +L  +  L +  C ++  L E         
Sbjct: 1677 VSPNIGNLKKILLINLKDCTGLCELPRSIYKLKSVKTLIVSGCTKIDKLEE-------DI 1729

Query: 632  RHCTSLKTLSNSSTLLTR 649
               TSL  L    T +TR
Sbjct: 1730 EQMTSLTILVADKTSVTR 1747



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 185/517 (35%), Positives = 270/517 (52%), Gaps = 69/517 (13%)

Query: 1    MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFI-DDKLNRGNEIS 59
            MA+ SS I       +DVFLSFRG D    F+SHL  AL    I  F  DD++ RG+++S
Sbjct: 508  MAAVSSKIWFSVGGIYDVFLSFRGDDTHAKFISHLYTALENAGIYVFRGDDEIQRGDQVS 567

Query: 60   PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
             SL  AI  S+ISI++ S  YA+SRWC+ EL  I+ +    G +VVPVFY +DP++    
Sbjct: 568  VSLLQAIGQSRISIIVLSRNYANSRWCMLELENIMGNSRTQGMVVVPVFYKIDPTEVRNQ 627

Query: 117  ---------------------------GYCPSLGWMGIFDIPT-SESVLIEGNVNDISKK 148
                                             G  G+  I + +ES  I   V+ ++  
Sbjct: 628  SGRFGEDFESLLLRMSVDTHKFSNWRRALAEVRGTTGVVIINSRNESEDITKIVDHVTNL 687

Query: 149  L--SDLFPSDNKDQLVGVESIIKEIESQLLSG--STEFNTVGIWGIGGIGKTTIASAIYS 204
            L  +D F  D+    VGV+S ++++  QLL+G  S +   +GIWG+GGIGKTTIA A Y+
Sbjct: 688  LDRTDFFVVDHP---VGVDSRVQDV-IQLLNGQESKDPRLLGIWGMGGIGKTTIAKAAYN 743

Query: 205  NISSHFEGSYFMQNIRDESEKVGGLANIH------------LNFE---------RRRLSR 243
             I   FE   F+ N+R+  E+  G+ ++             +  E         + RL  
Sbjct: 744  KIHRDFEAKSFLLNVREVWEQDNGIVSLQQRLLSDIYKTTKIKIETVESGKMILQERLCH 803

Query: 244  MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
             ++ +V  D+  L Q++ L G    F  GSR+IITTRD  LL      +V +V+ +KE+ 
Sbjct: 804  KRIFLVLDDVNKLDQLNALCGSHGWFGEGSRIIITTRDDDLLGR---LKVHYVYRMKEMD 860

Query: 304  YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY-LKGMSEEEWESAV 362
             N+SL LFS + F Q  P  GF +LS  V+KY+ G PLAL+V+GS+ L   S++EW+S +
Sbjct: 861  SNESLELFSWHVFKQPIPIEGFGDLSTDVVKYSGGSPLALEVIGSFLLTRRSKKEWKSIL 920

Query: 363  NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACF-FKGND-QYLVMNFLDACRFSAKI 420
             KL +     I  +L++S+D L D  +  FLD AC    G     L+  F     F  ++
Sbjct: 921  EKLTKPDVKLIPDMLRLSFDNLSDNIKETFLDIACLNLSGMSLDDLIQIFKKDVHFK-EL 979

Query: 421  GISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQES 456
            G+  LV  SLV I S  +I   DLLQ +G EI +++S
Sbjct: 980  GMEELVTISLVQIDSEKRIERDDLLQLLGREIRKEKS 1016



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 174/510 (34%), Positives = 258/510 (50%), Gaps = 63/510 (12%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK--LNRGNEISPSLSSAIEGS 69
           P   +DVFLSF  KD   +  S+L  AL    I  + D+   LN    I+ S+  AI GS
Sbjct: 16  PSCIYDVFLSFCDKDTSESLASYLYTALTVAGIVVYKDEDKLLNHDQMITSSVLHAIAGS 75

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL------- 122
           ++SI++FS+ YA S  C  EL KI+E +    QIVVPVFY  DPS   +   L       
Sbjct: 76  RLSIIVFSKLYAVSTCCRQELEKIMECRRTTCQIVVPVFYDADPSGVFHQEDLLGEASKY 135

Query: 123 ------------------GWMGIFDIPTSESVL-IEGNVNDISKKLSDLFPSDNKDQLVG 163
                                 +     SE ++ I  +V ++  + +DLF +D+    VG
Sbjct: 136 LKQRILKKDKLIHEVCNISGFAVHSRNESEDIMKIVDHVTNLLDR-TDLFVADHP---VG 191

Query: 164 VESIIKEIESQLLSGSTEFNTV--GIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           V+S +++I  QLL+     + +  G+WG+GGIGKTTIA A Y+ I   FE   F+ N+R+
Sbjct: 192 VKSRVQDI-IQLLNSQESKSPLLLGVWGMGGIGKTTIAKAAYNKIHHDFEAKSFLPNVRE 250

Query: 222 ESEKVGGLANIHLNFE---------------------RRRLSRMKVLIVFYDLTDLKQID 260
             E+  G+ ++                          + RL   ++ +V  D+  L Q++
Sbjct: 251 VWEQDNGVVSLQQQLLSDIYKTTKIKIDTVESGKMILQERLRHKRIFLVLDDVNKLDQLN 310

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G    F  GSR+IITTRD  LL      +V +V+ +KE+  N+SL LFS +AF Q  
Sbjct: 311 ALCGSHGWFGEGSRIIITTRDDDLLGR---LKVHYVYRMKEMDSNESLELFSWHAFKQPI 367

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEE-WESAVNKLKRMPHMDIQKVLKV 379
           P  GF ELS  V+KY+ G+PLALQV+GS+L     ++ W+  + KL + P   IQ+VLK+
Sbjct: 368 PIEGFGELSTDVVKYSRGLPLALQVIGSFLLTRRRKKVWKRVLEKLTK-PDDKIQEVLKL 426

Query: 380 SYDGLDDEEQNIFLDTACF-FKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNK 437
            +D L D  +  FLD AC    G     ++          ++G+  LV   LV + S  +
Sbjct: 427 IFDNLSDNIKETFLDIACLNLSGMSLDDLLQIFQKDVHFTELGMEELVINGLVNLDSEKR 486

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLW 467
           I MHDL+Q  G EI +++S       S++W
Sbjct: 487 IGMHDLVQLFGREIRQEKSTGMAAVSSKIW 516



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
            L  LK L L    NLK+ P+ S   N+E L LK+   +  +  +IGNL +++ ++L +C+
Sbjct: 1637 LKELKFLNLSHSHNLKQTPDFSYLPNLEKLILKDCPNLSSVSPNIGNLKKILLINLKDCT 1696

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            GL  +   +  LKS++ L +SGC K++KL E+I  + SL  L   +    ++P ++
Sbjct: 1697 GLCELPRSIYKLKSVKTLIVSGCTKIDKLEEDIEQMTSLTILVADKTSVTRVPFAV 1752


>gi|359493275|ref|XP_002272079.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
 gi|296081003|emb|CBI18507.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 255/705 (36%), Positives = 373/705 (52%), Gaps = 90/705 (12%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPS 61
           +SSSS  + P   ++VFLSFRG+D R NF  HL AAL R+ I TF DD+ L+RG EI+PS
Sbjct: 9   ASSSSTPVRPW-DYEVFLSFRGEDTRRNFTGHLYAALIRKGIVTFRDDEGLSRGEEIAPS 67

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----A 116
           L +AIE S+ ++VI SE YA SRWCL EL KI+E + + G IV PVFY VDPS       
Sbjct: 68  LLTAIEKSRCALVILSEHYADSRWCLEELAKIMEWRAEMGLIVYPVFYHVDPSHVRHQRG 127

Query: 117 GYCPSLG-------------WMGIFDIPTSESVLIEGN------VNDISKKLSDLFPSDN 157
            Y  +L              W        + S     N      VNDI++ +   F   +
Sbjct: 128 HYGEALADHERNGSGHQTQRWRAALTEVANLSGWHAENGSESEVVNDITRTILARFTRKH 187

Query: 158 ---KDQLVGVESIIKEIESQLLS-GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
                 LVG++  + E+  Q++   S E   +GI+G+GGIGKTT+A  +Y+ I+  F  +
Sbjct: 188 LHVDKNLVGMDDRLNEVIPQMIDLSSNEVRMIGIYGLGGIGKTTVAKVVYNRIAPLFMIT 247

Query: 214 YFMQNIRDESEKVGG------------------LANIH--LNFERRRLSRMKVLIVFYDL 253
            F+ N+R++S+  G                   ++N+   ++  + RL    VL++  D+
Sbjct: 248 SFIANVREDSKSRGLLHLQKQLLHEILPSRKNFISNVDEGIHMIQDRLCFKSVLLILDDV 307

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             L Q++ L G  + F PGSR+I+TTRD  LL  H+   +   +EVK+L   +++ LFS+
Sbjct: 308 DTLDQLEGLAGDCNWFGPGSRIIVTTRDRHLLDVHK---MDAFYEVKKLDQMEAIELFSQ 364

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AF Q HP   +  LSN +++  +G+PL L+VLG +L G +  EW+S + KLK+ P+ +I
Sbjct: 365 HAFEQKHPKEDYETLSNSMVRCVDGLPLGLKVLGRFLFGKTILEWKSELQKLKQEPNQEI 424

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           Q VLK SYD LD  +++IFLD ACFF G D+  V   LDAC F A+ GI  L  K L+TI
Sbjct: 425 QGVLKRSYDELDLTQKDIFLDVACFFNGEDKDHVTRILDACNFYAESGIRVLGDKCLITI 484

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------------S 481
            +NKI MHDLLQ+MG  IVRQ+    P K SRL +P+D+ +VL   +            S
Sbjct: 485 FDNKILMHDLLQQMGRYIVRQDYPNYPEKWSRLCYPDDVNRVLIRKSGTEAIEGILFDLS 544

Query: 482 LPTGINLDS-------------LKELYLGGCSNL---------KRFPEISCNIEDLDLKE 519
           +P    +D              LK  +  G  ++         K F   S  +  L    
Sbjct: 545 IPKRKRIDITTKSFEMMTRLRLLKIYWAHGSISIREDNKVKLSKDFEFPSYELRYLYWHG 604

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
             +E LPSS      L++LD+   S LK +      L+ L  + +S    L ++P+    
Sbjct: 605 YPLESLPSSF-YAEDLIELDMCY-SSLKQLWESDEPLEKLNTIRVSFSQHLMEIPDFSVR 662

Query: 580 LESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             +LE L L       ++  S+ +L K+  L L+NCK+L S P +
Sbjct: 663 APNLEKLILDGCSSLLEVHPSIGRLKKIIVLNLKNCKQLSSFPSI 707



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 103/169 (60%), Gaps = 8/169 (4%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIG-NLSRL 535
           +S P+  ++++L+ L   GCS LK+FP+I CN+E    L L  TAIEELPSSIG +++ L
Sbjct: 702 SSFPSITDMEALEILNFAGCSELKKFPDIQCNMEHLLKLYLSSTAIEELPSSIGQHITGL 761

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
           V LDL  C  L S+ + +  LKSL  L LSGC KLE  PE + ++E+L+ L L     E 
Sbjct: 762 VLLDLKRCKNLTSLPTCIFKLKSLEYLFLSGCSKLENFPEIMEDMENLKELLLDGTSIEV 821

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTL 640
           +PSS+++L  L  L L+ CK+L SLP+  C      +I    C+ L  L
Sbjct: 822 LPSSIERLKGLVLLNLRKCKKLVSLPDSMCNLRSLQTIIVSGCSQLDQL 870



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 84/140 (60%), Gaps = 4/140 (2%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
           TSLPT I  L SL+ L+L GCS L+ FPEI  ++E+L    L  T+IE LPSSI  L  L
Sbjct: 773 TSLPTCIFKLKSLEYLFLSGCSKLENFPEIMEDMENLKELLLDGTSIEVLPSSIERLKGL 832

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
           V L+L  C  L S+   +CNL+SL+ + +SGC +L++LP+ +G+L+ L  L+       +
Sbjct: 833 VLLNLRKCKKLVSLPDSMCNLRSLQTIIVSGCSQLDQLPKNVGSLQHLVQLHADGTAIRQ 892

Query: 596 IPSSMKQLSKLSDLRLQNCK 615
            P S+  L  L  L    CK
Sbjct: 893 PPDSIVLLRGLRVLIYPGCK 912


>gi|124361211|gb|ABN09183.1| TIR; AAA ATPase [Medicago truncatula]
          Length = 1474

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 257/738 (34%), Positives = 376/738 (50%), Gaps = 119/738 (16%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
            +DVFLSFRG D R  F+SHL  AL    I  F DD ++ RG++IS SL  AIE SKISIV
Sbjct: 393  YDVFLSFRGNDTRAKFISHLYTALENAGIYVFRDDDEIQRGDQISASLLQAIEQSKISIV 452

Query: 75   IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG---------- 123
            + S  YA SRWC+ EL  I+ +    G +VVPVFY +DPS+        G          
Sbjct: 453  VLSRSYADSRWCMLELENIMGNSRTQGMVVVPVFYEIDPSEVRNQSGKFGEDFESLLLRT 512

Query: 124  ---------W-MGIFDIPTSESVLIEGNVN---DISKKL---------SDLFPSDNKDQL 161
                     W   + ++  +  V+I  + N   DI K +         +DLF +D+    
Sbjct: 513  SVDTLKLSNWKTALAEVGGTAGVVIINSRNESEDIRKIVDHVTNLPDRTDLFVADHP--- 569

Query: 162  VGVESIIKEIESQLLSG--STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            VGV+S ++++  QLL+   S +   +GIWG+GGIGKTTIA A Y+ I   FE   F+ N+
Sbjct: 570  VGVDSRVQDV-IQLLNNQESKDPLLLGIWGMGGIGKTTIAKAAYNKIRHDFEAKSFLLNV 628

Query: 220  RDESEKVGGLANIH------------LNFE---------RRRLSRMKVLIVFYDLTDLKQ 258
            R+  E+  G+ ++             +  E         + RL   ++ +V  D+  + Q
Sbjct: 629  REVWEQDNGVVSLQQRLLSDIYKTTKIKIETVESGKMILQERLRHKRIFLVLDDVNKVDQ 688

Query: 259  IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
            ++ L G  + F  GSR++ITTRD  LL      +V +V+ +KE+  N+SL LFS +AF Q
Sbjct: 689  LNALCGSHEWFGEGSRIMITTRDDDLLSR---LKVDYVYRMKEMDGNESLELFSWHAFKQ 745

Query: 319  NHPAAGFLELSNIVIKYANGVPLALQVLGSY-LKGMSEEEWESAVNKLKRMPHMDIQKVL 377
              P  GF +LS  V+ Y+ G+P+ALQV+GS+ L    ++EW+S + KLK +P+ ++ + L
Sbjct: 746  PIPIEGFGDLSTDVVMYSGGLPIALQVIGSFLLTRRRKKEWKSVLEKLKLIPNDEVLEKL 805

Query: 378  KVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
            K+S+DGL DD+ + IFLD A FF G DQ  V   L+ C   A IGIS LV KSLVT+   
Sbjct: 806  KISFDGLSDDDVKEIFLDIAFFFIGMDQEEVTTILEGCGHFADIGISLLVQKSLVTVDRK 865

Query: 436  NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL--PTGINL----- 488
            NKI MHDLL++MG EIVR++SI+   + SRLW  ED+  VL++ T      G+ L     
Sbjct: 866  NKIGMHDLLRDMGREIVRKKSIEISKEPSRLWRYEDVDSVLSKATRALDVKGLTLKMSRM 925

Query: 489  --------------DSLKELYLGGCSNLKRFPEISCNIEDL------------------- 515
                          + LK L L G      +  +S +I  L                   
Sbjct: 926  DSRTYMETKDFEKINKLKFLQLAGVQLEGNYKYLSRDIRWLCWHGFPLKYTPEEFHQEHL 985

Query: 516  ---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
               DLK + +E++      L  L  L+L++   LK  +     L +L +L L  C  L  
Sbjct: 986  VAVDLKYSHLEQVWKKSQLLKELKFLNLSHSHNLKQ-TPDFSYLPNLEKLILKDCPNLSS 1044

Query: 573  LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
            +   IGNL+ +  +NL +     ++P S+ +L  +  L +  C ++  L E         
Sbjct: 1045 VSPNIGNLKKILLINLKDCTGLCELPRSIYKLKSVKTLIVSGCTKIDKLEE-------DI 1097

Query: 632  RHCTSLKTLSNSSTLLTR 649
               TSL  L    T +TR
Sbjct: 1098 EQMTSLTILVADKTSVTR 1115



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/325 (37%), Positives = 179/325 (55%), Gaps = 32/325 (9%)

Query: 159 DQLVGVESIIKEIESQLLSG--STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           D  VGV+S ++++  QLL+G  S +   +GIWG+GGIGKTTIA A Y+ I   FE   F+
Sbjct: 65  DHPVGVDSRVQDV-IQLLNGQESKDPRLLGIWGMGGIGKTTIAKAAYNKIHRDFEAKSFL 123

Query: 217 QNIRDESEKVGGLANIH------------LNFE---------RRRLSRMKVLIVFYDLTD 255
            N+R+  E+  G+ ++             +  E         + RL   ++ +V  D+  
Sbjct: 124 LNVREVWEQDNGIVSLQQRLLSDIYKTTKIKIETVESGKMILQERLCHKRIFLVLDDVNK 183

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L Q++ L G    F  GSR+IITTRD  LL      +V +V+ +KE+  N+SL LFS + 
Sbjct: 184 LDQLNALCGSHGWFGEGSRIIITTRDDDLLGR---LKVHYVYRMKEMDSNESLELFSWHV 240

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY-LKGMSEEEWESAVNKLKRMPHMDIQ 374
           F Q  P  GF +LS  V+KY+ G PLAL+V+GS+ L   S++EW+S + KL +     I 
Sbjct: 241 FKQPIPIEGFGDLSTDVVKYSGGSPLALEVIGSFLLTRRSKKEWKSILEKLTKPDVKLIP 300

Query: 375 KVLKVSYDGLDDEEQNIFLDTACF-FKGND-QYLVMNFLDACRFSAKIGISRLVGKSLVT 432
            +L++S+D L D  +  FLD AC    G     L+  F     F  ++G+  LV  SLV 
Sbjct: 301 DMLRLSFDNLSDNIKETFLDIACLNLSGMSLDDLIQIFKKDVHFK-ELGMEELVTISLVQ 359

Query: 433 I-SNNKITMHDLLQEMGGEIVRQES 456
           I S  +I   DLLQ +G EI +++S
Sbjct: 360 IDSEKRIERDDLLQLLGREIRKEKS 384



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
            L  LK L L    NLK+ P+ S   N+E L LK+   +  +  +IGNL +++ ++L +C+
Sbjct: 1005 LKELKFLNLSHSHNLKQTPDFSYLPNLEKLILKDCPNLSSVSPNIGNLKKILLINLKDCT 1064

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            GL  +   +  LKS++ L +SGC K++KL E+I  + SL  L   +    ++P ++
Sbjct: 1065 GLCELPRSIYKLKSVKTLIVSGCTKIDKLEEDIEQMTSLTILVADKTSVTRVPFAV 1120


>gi|147821215|emb|CAN66453.1| hypothetical protein VITISV_004613 [Vitis vinifera]
          Length = 1441

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 256/729 (35%), Positives = 357/729 (48%), Gaps = 147/729 (20%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +++VFLSFRG+D R NF  HL +AL ++ I TF  D   +G  I P+   AIE S+  +V
Sbjct: 225 EYEVFLSFRGQDTRQNFTDHLYSALSQKGIRTFRMDH-TKGEMILPTTLRAIEMSRCFLV 283

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSL------- 122
           I S+ YA S+WCL+EL KI+ES+ + G+JV PVFY V+PSD       Y  +L       
Sbjct: 284 ILSKNYAHSKWCLDELKKIMESRRQMGKJVFPVFYHVNPSDVRNQGESYGEALXNHERKI 343

Query: 123 ---------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                          G +  + I    ES  I      I  K S      +K+ L+G++ 
Sbjct: 344 PLEYTQKLRAALREVGNLSGWHIQNGFESDFIXDITRVILMKFSQKLLQVDKN-LIGMDY 402

Query: 167 IIKEIES---QLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
            ++++E    Q++   S     VGI+G GGIGKTT+A  +Y+ I + F  + F+ N+R++
Sbjct: 403 RLEDMEEIFPQIIDPLSNNVXMVGIYGFGGIGKTTMAKVLYNRIGAQFMITSFIANVRED 462

Query: 223 SEKVGGL--------------------ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           S+  G L                     +  ++  + RL   KVL+V  D+ DL Q++ L
Sbjct: 463 SKSRGLLYLQKQLLHDILPKRKNFIRNVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEAL 522

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G  + F PGSR+I+TTRD  LL+ H    +  ++E K+L + +++ LF  NAF QNHP 
Sbjct: 523 AGDHNWFGPGSRIIVTTRDKHLLEVHE---MDALYEAKKLDHKEAVELFCWNAFKQNHPK 579

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             +  LSN V+ Y NG+PL L                      KR P+ +IQ+VLK SYD
Sbjct: 580 EDYKTLSNSVVHYVNGLPLGL----------------------KREPNQEIQRVLKRSYD 617

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
            LD  +Q IFLD ACFF G D+  V   LDAC F A  GI  L  K  +TI +NKI MHD
Sbjct: 618 VLDYTQQXIFLDVACFFNGEDKDFVTRILDACNFYAXSGIGVLGDKCFITILDNKIWMHD 677

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT---------------------- 480
           LLQ+MG +IVRQE  KDPGK SRL +PE + +VL                          
Sbjct: 678 LLQQMGRDIVRQECPKDPGKWSRLCYPEVVNRVLTRKMWDLEXAFMREDNKVKLSKDFEF 737

Query: 481 ----------------SLPTGINLDSLKELYLGGC-SNLKRFPEISCNIEDLDLKETAIE 523
                           SLP G   + L EL +  C S+LKR  E    +E L+    +  
Sbjct: 738 PSYELRYLHWHGYPLESLPLGFYAEDLVELDM--CYSSLKRLWEGDLLLEKLNTIRVSCS 795

Query: 524 ----ELPSSIGNLSRLVDLDLTNCSGLKSVS-----------------------SRLCNL 556
               E+P  I +   L  L L  CS L  V                          + ++
Sbjct: 796 QHLIEIPDIIVSAPNLEKLILDGCSSLLEVHPSIGKLNKLFLLNLKNCKKLICFPSIIDM 855

Query: 557 KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
           K+L  LN S C  L+K P   GN+E+L  L LA    E++PSS+  L+ L  L L+ CK 
Sbjct: 856 KALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLLDLKWCKN 915

Query: 617 LQSLPELPC 625
           L+SLP   C
Sbjct: 916 LKSLPTSIC 924



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 1/102 (0%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF G+D RHNF  HL  AL ++ I TF D ++L RG EI+  L  AIE S+I +V
Sbjct: 27  YDVFLSFMGEDTRHNFTDHLYRALDQKGIRTFRDHEELRRGEEIAAELLKAIEESRICVV 86

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           I S+ YA SRWCL+ELVKI+  K   GQ+V+P+FY VDPS+ 
Sbjct: 87  ILSKNYARSRWCLDELVKIMGWKKCMGQLVLPIFYQVDPSNV 128



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 99/162 (61%), Gaps = 10/162 (6%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
             P+ I++ +L+ L    CS LK+FP I  N+E   +L L  TAIEELPSSIG+L+ LV L
Sbjct: 849  FPSIIDMKALEILNFSSCSGLKKFPNIQGNMENLLELYLASTAIEELPSSIGHLTGLVLL 908

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            DL  C  LKS+ + +C LKSL  L+LSGC KLE  PE   N+++L+ L L     E +PS
Sbjct: 909  DLKWCKNLKSLPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPS 968

Query: 599  SMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            S+++L  L  L L+ CK L SL    C       + TSL+TL
Sbjct: 969  SIERLKGLILLNLRKCKNLVSLSNGMC-------NLTSLETL 1003



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 80/141 (56%), Gaps = 4/141 (2%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLPT I  L SL+ L L GCS L+ FPE++ N+++L    L  T IE LPSSI  L  L+
Sbjct: 918  SLPTSICKLKSLENLSLSGCSKLESFPEVTENMDNLKELLLDGTPIEVLPSSIERLKGLI 977

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L+L  C  L S+S+ +CNL SL  L +SGC +L  LP  +G+L+ L  L+       + 
Sbjct: 978  LLNLRKCKNLVSLSNGMCNLTSLETLIVSGCSQLNNLPRNLGSLQCLAQLHADGTAIAQP 1037

Query: 597  PSSMKQLSKLSDLRLQNCKRL 617
            P S+  L  L  L    CK L
Sbjct: 1038 PDSIVLLRNLQVLIYPGCKIL 1058



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 97/214 (45%), Gaps = 36/214 (16%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
             SL  G+ NL SL+ L + GCS L   P     + C +  L    TAI + P SI  L  
Sbjct: 988  VSLSNGMCNLTSLETLIVSGCSQLNNLPRNLGSLQC-LAQLHADGTAIAQPPDSIVLLRN 1046

Query: 535  LVDLDLTNCSGLK--SVSSRLC---------NLKSLR------------RLNLSGCLKLE 571
            L  L    C  L   S+ S            N   LR             L++S C  +E
Sbjct: 1047 LQVLIYPGCKILAPNSLGSLFSFWLLHGNSPNGIGLRLPSSFSSFRSLSNLDISDCKLIE 1106

Query: 572  -KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
              +P  I +L SL+ L+L+  +F  IP+ + +L+ L DLRL  C+ L  +PELP     I
Sbjct: 1107 GAIPNGICSLISLKKLDLSRNNFLSIPAGISELTNLKDLRLGQCQSLTGIPELPPSVRDI 1166

Query: 630  HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
             A +CT+L  L  SS++ T        F F NCS
Sbjct: 1167 DAHNCTAL--LPGSSSVSTLQGLQ---FLFYNCS 1195


>gi|121544146|gb|ABM55687.1| TIR-NBS-LRR class disease resistance protein [(Populus tomentosa x
           P. bolleana) x P. tomentosa]
          Length = 678

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 205/538 (38%), Positives = 300/538 (55%), Gaps = 68/538 (12%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I TF DD +L RG EIS  L  AIE S+
Sbjct: 48  PEGAYDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISHHLLRAIEESR 107

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
           ISIV+FS+GYASSRWCLNELV+IL+ KN K GQIV+P+F+ +DPSD     A +  +   
Sbjct: 108 ISIVVFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFFDIDPSDVRKQTASFAEAFVK 167

Query: 123 ------------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDN 157
                                   GW  + D+    E+  I+  +ND+  KLS  + S  
Sbjct: 168 HEERSQEKLVQEWRKALKEAGNLSGW-NLNDMANGHEAKFIKEIINDVFNKLSREYLS-V 225

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
            + LVG++ +  +I   L + + +    GI G+ GIGKTTIA  +++ +   FEGS F+ 
Sbjct: 226 PEHLVGMD-LAHDILDFLSTATDDVCIAGIHGMPGIGKTTIAKVVFNQLYYRFEGSCFLS 284

Query: 218 NIRDESEKVGGLANIHLNFE---------------------RRRLSRMKVLIVFYDLTDL 256
           NI + S++  GLA +                          + R+ R +VL+V  D+   
Sbjct: 285 NINETSKQFNGLALLQKQLLHDILKQDVANINCVDRGKVLIKERIRRKRVLVVADDVAHP 344

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q++ L+G       GSRVIITTRD  +L      +    ++++EL   +SL LF  +A 
Sbjct: 345 EQLNALMGERSWLGRGSRVIITTRDSSVL-----LKADQTYQIEELKPYESLQLFRWHAL 399

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
               P   ++ELS   + Y  G+PLAL+V+G+ L G + + W+  + KL+R+PH DIQ  
Sbjct: 400 RDTKPTEDYMELSKDAVDYCGGLPLALEVMGACLSGKNRDGWKCVIEKLRRIPHHDIQGK 459

Query: 377 LKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTIS 434
           L+ S+D LD EE +N FLD ACFF    +  V   L A C ++ ++ +  L  +SL+ ++
Sbjct: 460 LRTSFDALDGEELRNAFLDIACFFIDRKKEYVAKVLGARCGYNPEVDLETLRERSLIKVN 519

Query: 435 N-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD 489
              KITMHDL ++MG E+VR+ S K+PGKR+R+W+ ED + VL +   T +  G+ LD
Sbjct: 520 CFGKITMHDLFRDMGREVVRESSPKEPGKRTRIWNQEDAWNVLQQQKGTDVVEGLTLD 577


>gi|357499537|ref|XP_003620057.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495072|gb|AES76275.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1060

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 252/703 (35%), Positives = 368/703 (52%), Gaps = 104/703 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISI 73
           K+ VFLSFRG D R+ F  +L  AL  + I TFID + L RG+EI+PSL  AIE S+I I
Sbjct: 17  KYQVFLSFRGSDTRYGFTGNLYKALTDKGINTFIDKNGLQRGDEITPSLLKAIEESRIFI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL------ 122
            +FS  YASS +CL+ELV I+      G++V+PVF+ V+P+        Y  +L      
Sbjct: 77  PVFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVEPTVVRHRKGSYGEALAEHEKR 136

Query: 123 ------------GWM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKD 159
                       GW           G  D P   E  LI   V  IS K+S   P     
Sbjct: 137 FQNDPKNMERLQGWKKALSQAANLSGYHDSPPGYEYKLIGKIVKYISNKISRQ-PLHVAT 195

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG++S +++++S L  GS +  + VGI+GIGG+GK+T+A  IY+ ++  FEGS F+ +
Sbjct: 196 YPVGLQSRVQQVKSLLDEGSDDGVHMVGIYGIGGLGKSTLARQIYNFVADQFEGSCFLHD 255

Query: 219 IRDESE-------------KVGGLANIHLNFE-------RRRLSRMKVLIVFYDLTDLKQ 258
           +R+ S              K  GL  I L+         + RL R K+L++  D+ +LKQ
Sbjct: 256 VRENSAQNNLKYLQEKLLLKTTGL-EIKLDHVSEGIPVIKERLCRKKILLILDDVDNLKQ 314

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L G LD F  GSRVIITTR+  LL +H G    H   V+ L+  ++L L    AF  
Sbjct: 315 LHALAGGLDWFGCGSRVIITTRNKDLLSSH-GIESTHA--VEGLNETEALELLRWMAFKS 371

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           +   +G+ ++ N  + YA G+PL L+V+GS L G S E+W+  ++   R+P+ +IQK+LK
Sbjct: 372 DKVPSGYEDILNRAVAYAFGLPLVLEVVGSNLFGKSIEDWKHTLDGYDRIPNKEIQKILK 431

Query: 379 VSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
           VSYD L++EEQ++FLD AC FKG      + ++    D C  +  +G+  L GKSLV IS
Sbjct: 432 VSYDALEEEEQSVFLDIACCFKGYQWKEFEDILCAHYDHC-ITHHLGV--LAGKSLVKIS 488

Query: 435 N-------NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP---- 483
                   N + +HDL+++MG E+VRQES K+PG+RSRLW  EDI  VL ENT       
Sbjct: 489 TYYPSGSINDVRLHDLIKDMGKEVVRQESPKEPGERSRLWRQEDIIHVLKENTGTSKIEM 548

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI------GNLSRLVD 537
             +NL S++ +        K+  ++   I +  L    ++ LPSS+      G LS+ + 
Sbjct: 549 IYMNLHSMESVIDKKGKAFKKMTKLKTLIIENGLFSGGLKYLPSSLRVLKWKGCLSKCLS 608

Query: 538 -------------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
                        L L  C  L  +   +  L +L +L+ + C  L  +   IG+L  LE
Sbjct: 609 SSILNKKFQNMKVLTLDYCEYLTHIPD-VSGLSNLEKLSFTCCDNLITIHNSIGHLNKLE 667

Query: 585 YLN-LAEKDFEKI-PSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           +L+    +  E   P  +  L KL    L  C+ L + PEL C
Sbjct: 668 WLSAYGCRKLEHFRPLGLASLKKLI---LYECECLDNFPELLC 707



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 36/234 (15%)

Query: 411 LDACRFSAKI----GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRL 466
           LD C +   I    G+S L   S  T  +N IT+H+ +    G + + E +   G R +L
Sbjct: 624 LDYCEYLTHIPDVSGLSNLEKLSF-TCCDNLITIHNSI----GHLNKLEWLSAYGCR-KL 677

Query: 467 WHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIE 523
            H              P G  L SLK+L L  C  L  FPE+ C   +I+++D+  T+I 
Sbjct: 678 EHFR------------PLG--LASLKKLILYECECLDNFPELLCKMAHIKEIDISNTSIG 723

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK--SLRRLNLSGCLKLEKLPEEIGNLE 581
           ELP S  NLS L +L +T  SG+K       N+   SL   NLS     E LP  +    
Sbjct: 724 ELPFSFQNLSELHELTVT--SGMKFPKIVFSNMTKLSLSFFNLSD----ECLPIVLKWCV 777

Query: 582 SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
           ++ +L+L+  +F+ +P  +++   L ++ +  C+ L+ +  +P     + AR+C
Sbjct: 778 NMTHLDLSFSNFKILPECLRECHHLVEINVMCCESLEEIRGIPPNLKELCARYC 831


>gi|356503056|ref|XP_003520328.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 968

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 247/695 (35%), Positives = 372/695 (53%), Gaps = 86/695 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R +FV HLN AL +  ++TF+D++ L++G ++   L +AIEGS+I+IV
Sbjct: 19  YDVFINFRGEDTRRSFVCHLNCALSKAGVKTFLDEENLHKGMKLD-ELMTAIEGSQIAIV 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSE 134
           +FS+ Y  S WCL EL K++E    YGQ V+PVFY +DPS   +       G     T+E
Sbjct: 78  VFSKSYTESTWCLRELEKVIECNETYGQSVLPVFYNIDPSVVRHRDEKHDFGKVLKSTAE 137

Query: 135 SVL----IEGNVNDISKKLS--------DLFPSDNKDQLVG--VESIIKEIESQLLS--- 177
                  +E  ++  S+ LS        D     N  +LV   VE ++ +IE  +LS   
Sbjct: 138 KNYSGEHLENALSRWSRALSEASKFSGWDASKFRNDAELVEKIVEDVLTKIEYDVLSITK 197

Query: 178 ------------------GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
                              ST    + IWG+GG GKTT A AIY+ I+  F    F+++I
Sbjct: 198 FPVGLKSRVQKVIGFIENQSTRACIIVIWGMGGSGKTTAAKAIYNEINCRFGHKSFIEDI 257

Query: 220 RD---ESEKVG----------------------GLANIHLNFERRRLSRMKVLIVFYDLT 254
           R+   ++E  G                      G+  I +    +RLS  +VLIV  D+ 
Sbjct: 258 REVCSQTESKGLVSLQEKLLSDILKTNHQIQNVGMGTIMI---EKRLSGKRVLIVLDDVN 314

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           ++ Q++ L G  + F PG+ +IITTRDV LL      +V  V+E+++++ N+SL LFS +
Sbjct: 315 EIGQVEGLCGNCEWFGPGTVIIITTRDVGLLNT---LKVDCVYEMEQMNENESLELFSWH 371

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF +  P   F EL+  V+ Y  G+PLAL+VLGSYL    +  WES ++KL+ +P+ ++Q
Sbjct: 372 AFDEAKPRKDFNELARSVVVYCGGLPLALRVLGSYLNNRRKNLWESVLSKLEMIPNGEVQ 431

Query: 375 KVLKVSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           K L++S+DGL D  E++IFLD  CFF G D+  V + L+  +  AK  I+ L+G+SL+ +
Sbjct: 432 KKLRISFDGLSDYMEKDIFLDVCCFFIGKDRAYVTDVLNGRKLHAKTVITDLIGRSLIRV 491

Query: 434 -SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLK 492
             NNK+ MH LLQEMG EI+R++  K+PGKRSRLW  ED+  VL +NT       L    
Sbjct: 492 EKNNKLGMHPLLQEMGREIIREKLWKEPGKRSRLWFHEDVLDVLTKNTGTEAIEGLALKS 551

Query: 493 ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKS--VS 550
            L    C     F +    +++L L +    +L  +   LS+   L      G +S  + 
Sbjct: 552 HLTSRACFKTCAFEK----MKNLRLLQLDHAQLAGNYCYLSK--QLKWICWQGFRSKYIP 605

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
           + L  L+ +   +L     L+ L EE   L +L+ LNL+  KD  + P     L  L  L
Sbjct: 606 NNL-YLEDVIAFDLKHS-HLQLLWEEPQVLWNLKILNLSHSKDLTETP-DFSTLPSLEKL 662

Query: 610 RLQNCKRL----QSLPELPCGSSIHARHCTSLKTL 640
            L++C  L    QS+ +L     I+ + CTSL  L
Sbjct: 663 ILKDCPSLCKVHQSIGKLNNLLLINLKDCTSLSNL 697



 Score = 40.0 bits (92), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK L L    +L   P+ S   ++E L LK+  ++ ++  SIG L+ L+ ++L +C+
Sbjct: 633 LWNLKILNLSHSKDLTETPDFSTLPSLEKLILKDCPSLCKVHQSIGKLNNLLLINLKDCT 692

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++   +  LKSL+ L LSGC K+  L  +I  +ESL  L       +++P S 
Sbjct: 693 SLSNLPKEIYKLKSLKTLILSGCSKINILENDIVQMESLITLIAENTAMKQVPFSF 748


>gi|27764539|gb|AAO23069.1| R 4 protein [Glycine max]
          Length = 895

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 253/732 (34%), Positives = 363/732 (49%), Gaps = 127/732 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+ + S+  I    +DVFLSFRG D RH F  +L  AL    I T IDD+ L RG+EI+
Sbjct: 1   MAAKTRSLASI----YDVFLSFRGLDTRHGFTGNLYKALDDRGIYTSIDDQELPRGDEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
           P+LS AI+ S+I+I + S+ YASS +CL+ELV IL  K++ G +V+PVFY VDPSD  + 
Sbjct: 57  PALSKAIQESRIAITVLSQNYASSSFCLDELVTILHCKSE-GLLVIPVFYKVDPSDVRHQ 115

Query: 119 -------------------------------CPSLGWMGIFDIPTSESVLIEGNVNDISK 147
                                             L      D    E   I   V ++S+
Sbjct: 116 KGSYGEAMAKHQKRFKAKKEKLQKWRMALKQVADLSGYHFEDGDAYEYKFIGSIVEEVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           K+S        D  VG+ES + E+   L  GS +  + +GI G+GG+GKTT+A  +Y+ I
Sbjct: 176 KISRA-SLHVADYPVGLESQVTEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALEVYNLI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHLNFER-------RRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I L   +        RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASTIQHRLQRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  ++GR D F PGSRVIITTRD  LLK H   R    +EVK L++N 
Sbjct: 295 LLILDDVNKREQLKAIVGRPDWFGPGSRVIITTRDKHLLKCHEVERT---YEVKVLNHNA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L + NAF +      + ++ N V+ YA+G+PLAL+++GS + G S   WESAV   K
Sbjct: 352 ALQLLTWNAFKREKIDPSYEDVLNRVVTYASGLPLALEIIGSNMFGKSVAGWESAVEHYK 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGI 422
           R+P+ +I ++LKVS+D L +E++N+FLD A   KG      ++++ +  D C    K  I
Sbjct: 412 RIPNDEILEILKVSFDALGEEQKNVFLDIAFCLKGCKLTEVEHMLCSLYDNC---MKHHI 468

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--T 480
             LV KSL+ + +  + MHDL+Q +G EI RQ S ++PGKR RLW P+DI  VL +N  T
Sbjct: 469 DVLVDKSLIKVKHGIVEMHDLIQVVGREIERQRSPEEPGKRKRLWLPKDIIHVLKDNTGT 528

Query: 481 SLPTGINLD----------SLKELYLGGCSNLK--------------RFPE--------- 507
           S    I LD             E       NLK               FPE         
Sbjct: 529 SKIEIICLDFSISYKEETVEFNENAFMKMENLKILIIRNGKFSKGPNYFPEGLRVLEWHR 588

Query: 508 ---------------ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
                          + C + D  +K     E   S   L  L  L    C  L  +   
Sbjct: 589 YPSNFLPSNFDPINLVICKLPDSSIKSF---EFHGSSKKLGHLTVLKFDRCKFLTQIPD- 644

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRL 611
           + +L +LR L+   C  L  + + IG L+ L+ L+    +     P     L+ L  L+L
Sbjct: 645 VSDLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKLTSFPPL--NLTSLETLQL 702

Query: 612 QNCKRLQSLPEL 623
            +C  L+  PE+
Sbjct: 703 SSCSSLEYFPEI 714



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 73/157 (46%), Gaps = 16/157 (10%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIEELPS------SIGNLSRLVDLDL 540
           L  L  L    C  L + P++S    DL +L+E + E+  S      SIG L +L  L  
Sbjct: 625 LGHLTVLKFDRCKFLTQIPDVS----DLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSA 680

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             C  L S      NL SL  L LS C  LE  PE +G +E++  L L     +++P S 
Sbjct: 681 YGCRKLTSFPP--LNLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSF 738

Query: 601 KQLSKLSDLRLQNCKRLQ---SLPELPCGSSIHARHC 634
           + L+ L  L L  C  +Q   SL  +P  SS +  +C
Sbjct: 739 QNLTGLRLLALSGCGIVQLPCSLAMMPELSSFYTDYC 775



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 87/206 (42%), Gaps = 39/206 (18%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  +NL SL+ L L  CS+L+ FPEI     NI +L L    I+ELP S  NL+ L 
Sbjct: 687 TSFPP-LNLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSFQNLTGLR 745

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE-------------------- 576
            L L+ C G+  +   L  +  L       C + + +  E                    
Sbjct: 746 LLALSGC-GIVQLPCSLAMMPELSSFYTDYCNRWQWIELEEGEEKLGSIISSKAQLFCAT 804

Query: 577 ------------IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL- 623
                             + YLNL+  +F  +P   K+L  L  L + +C+ LQ +  L 
Sbjct: 805 NCNLCDDFFLAGFKRFAHVGYLNLSGNNFTILPEFFKELQFLRTLDVSDCEHLQEIRGLP 864

Query: 624 PCGSSIHARHCTSLKTLSNSSTLLTR 649
           P      AR+C S  T S++S LL +
Sbjct: 865 PILEYFDARNCVSF-TSSSTSMLLNQ 889


>gi|357494181|ref|XP_003617379.1| CCP [Medicago truncatula]
 gi|355518714|gb|AET00338.1| CCP [Medicago truncatula]
          Length = 1651

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 254/728 (34%), Positives = 377/728 (51%), Gaps = 127/728 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+DVRHNF+ +L  AL    I  F DDK L  G +ISP+LS AIE SKI+++
Sbjct: 15  YDVFLSFRGEDVRHNFIGYLRDALQHRGINAFFDDKNLRIGEDISPALSKAIEESKIAVI 74

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFD---- 129
           +FSE YASSRWCL ELVKI+E +K    QI  P+F+ VDPSD  +  +     + D    
Sbjct: 75  VFSENYASSRWCLGELVKIIECTKRNKKQISFPIFFHVDPSDVRHQKNSYEKAMVDHEVK 134

Query: 130 ------------IPTSESVLIEGN----------VNDISKKL-SDLFPSD--NKDQLVGV 164
                          SE+  ++G+          + +I +K+ +++ P      D  VG+
Sbjct: 135 FGKDSENVKAWITALSEAADLKGHHINTGSEIDHIKEIVEKVHANIAPKPLLYGDDPVGL 194

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           E   + + S+L   +     +GI G+GGIGKT +A ++Y+ I   FE + F+ N+R++S 
Sbjct: 195 EHHTENVMSRL-DNTDHTVMLGIHGLGGIGKTELAKSLYNKIVHQFEAASFLANVREKSN 253

Query: 225 KVGGLANIHLN-----FER----------------RRLSRMKVLIVFYDLTDLKQIDLLI 263
           K+ GL ++        FE+                ++L   KVL+V  D+ + +Q+  L 
Sbjct: 254 KINGLEDLQKTLLSEMFEKPDTDLGSTSKGIKEIKQKLGNKKVLLVLDDVDNKEQLKNLA 313

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           G  D F PGSR+IITTRD  LL       V  ++E+ EL+  DSL LF RNAFG++HP  
Sbjct: 314 GGSDWFGPGSRIIITTRDKGLLIGTHSFVVQKIYEMTELNEKDSLELFCRNAFGKSHPET 373

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYL-KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
           G+  +S+  + YA G+PLAL+V+GS L  G S   WE A+    R+P   IQ+VL+VSY+
Sbjct: 374 GYEAVSSRAVGYAKGLPLALKVIGSNLGGGKSLRAWEDALKNYDRIPRRGIQEVLQVSYN 433

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
            L+   Q++FLD ACFFKG+    V   LD   F+A  GI  LV KSL+ + +  + MHD
Sbjct: 434 VLEPNAQSVFLDIACFFKGDRVDYVEEILD--DFAAVTGIEELVNKSLLIVKDGCLDMHD 491

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL-NEN--TSLPTGINLDSLKELYLGGC 499
           L+QEMG +IV+QES ++P KRSRLW  +DI +VL NE   + +  GI LD  + +     
Sbjct: 492 LIQEMGRDIVKQESPRNPAKRSRLWSHKDIIKVLSNEKYGSDVLQGIMLDPPQPIKQQDW 551

Query: 500 SNLKRFPEISC--------------------NIEDLDLKETAIEELPS------------ 527
           S+   F +++C                    N+  LD +E   +  P+            
Sbjct: 552 SDTA-FEQMNCLRILIVRNTTFSSEPKHLPDNLTLLDWEEYPSKSFPAMFHPEEIIVFNL 610

Query: 528 -----------------SIGNLSR---------------LVDLDLTNCSGLKSVSSRLCN 555
                            +I N S+               L  L L NC+ L  V   +  
Sbjct: 611 PESKLTLEEPFKVFSKLTIMNFSKNESITVIPDVSGVENLRVLRLDNCTNLIMVHESVGF 670

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNC 614
           L+ L   + SGC KL    +++  L SLE+L+L    + E  P  + +++K   + + N 
Sbjct: 671 LEHLTHFSASGCAKLRNFQQKMF-LPSLEFLDLNLCVELEHFPDILNKMNKPLKIYMINT 729

Query: 615 KRLQSLPE 622
             ++ LP+
Sbjct: 730 A-IEELPD 736



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 85/206 (41%), Gaps = 57/206 (27%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLK----ETAIEELPSSIGNLSRLVDLDLTNC 543
           L SL+ L L  C  L+ FP+I  N  +  LK     TAIEELP SIGNL  LV +++T+ 
Sbjct: 694 LPSLEFLDLNLCVELEHFPDI-LNKMNKPLKIYMINTAIEELPDSIGNLIGLVSIEMTSS 752

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGC--LKLEKLPEEI-------GNLESLEYLN--LAEKD 592
             LK +   L  L +       GC  L L +   +I         L++L + N  L+++D
Sbjct: 753 WKLKYIPCSLFTLPNAVTFKFGGCSQLALRRFLHDIPSAANGRSTLKALHFGNSGLSDED 812

Query: 593 --------------------FEKIPSSMKQLSKLSDLRLQNCKRLQSLP----------- 621
                               F  +P  +K  + L+ L +  C  L+ +P           
Sbjct: 813 LKAILISFLELQELIASDNNFVSLPVCIKDSAHLTKLDVSGCNMLREIPVCINLRILNVY 872

Query: 622 ---------ELPCG-SSIHARHCTSL 637
                    ELPC    + AR+C  L
Sbjct: 873 GCVMLEHISELPCTIQKVDARYCIRL 898


>gi|357499505|ref|XP_003620041.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495056|gb|AES76259.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 861

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 252/699 (36%), Positives = 359/699 (51%), Gaps = 98/699 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+ VFLSFRG D R+ F  +L  AL  + I TFIDD  L RGNEI+PSL  AIE S+I I
Sbjct: 17  KYQVFLSFRGSDTRYGFTGNLYKALTDKGINTFIDDNGLQRGNEITPSLLKAIEESRIFI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL------ 122
            +FS  YASS +CL+EL  I+      G+ V+PVF+ VDPS        Y  +L      
Sbjct: 77  PVFSINYASSSFCLDELDHIIHCYKTKGRPVLPVFFGVDPSHVRHHKGSYGEALAEHEKR 136

Query: 123 ------------GWM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKD 159
                       GW           G  D P   E  LI   V  IS K+S   P +   
Sbjct: 137 FQNDPKNMERLQGWKDALSQAANLSGYHDSPPGYEYKLIGKIVKYISNKISRQ-PLNVAT 195

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG++S +++++S L  GS    + VGI+GIGG+GK+T+A AIY+ I+  FE S F++N
Sbjct: 196 YPVGLQSRVQQVKSLLDEGSDHGVHMVGIYGIGGLGKSTLAKAIYNFIADQFECSCFLEN 255

Query: 219 IRDESEKVGGLANIH-------LNFE-------------RRRLSRMKVLIVFYDLTDLKQ 258
           ++ ES     L N+        L  E             + RL   K+L++  D+  L Q
Sbjct: 256 VK-ESSASNNLKNLQQELLLKTLQLEIKLGSVSEGIPKIKERLHGKKILLILDDVDKLDQ 314

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +D L G LD F PGSRVIITTRD  LL  H    +   + V+EL+  ++L L    AF  
Sbjct: 315 LDALAGGLDWFGPGSRVIITTRDKHLLDCHG---IEKTYAVEELNGTEALELLRWKAFKN 371

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
               + + ++    + YA+G+PLA++V+GS L G S  E ES ++K  R+PH DIQK+L+
Sbjct: 372 EKVPSSYEDILKRAVVYASGLPLAIEVVGSNLFGKSIAECESTLDKYGRIPHKDIQKILR 431

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTI---- 433
           +SYD L++EEQ++FLD AC  KG     V   L A   +S +  I  LV KSL+ I    
Sbjct: 432 LSYDALEEEEQSVFLDIACCIKGCRLEKVKQILHAHYGYSIESHIGVLVDKSLINISWCC 491

Query: 434 -SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG------I 486
            S  K+T+H+L++ MG E+VRQES K+PG+RSRLW  +DI  VL ENT   TG      +
Sbjct: 492 FSGIKVTLHELIEVMGKEVVRQESPKEPGERSRLWSQDDIVHVLKENTG--TGKTEMICM 549

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL-------------- 532
           NL S++ +        K+   +   I +       ++ L SS+  L              
Sbjct: 550 NLHSMESVIDKKGKAFKKMTRLKTLIIENGHCSKGLKYLRSSLKALKWEGCLSKSLSSSI 609

Query: 533 -----SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
                  +  L L +C  L  +   +  L +L +L+   C  L  +   IG+L  LE L+
Sbjct: 610 LSKKFQDMTILILDHCEYLTHIPD-VSGLSNLEKLSFEYCKNLITIHNSIGHLNKLERLS 668

Query: 588 -LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
               +  ++ P     L+ L +L+L  C  L+S P+L C
Sbjct: 669 AFGCRTLKRFPPL--GLASLKELKLSCCYSLKSFPKLLC 705



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 36/170 (21%)

Query: 404 QYLVMNFLDACRFSAKI----GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKD 459
           Q + +  LD C +   I    G+S L   S      N IT+H+ +    G + + E +  
Sbjct: 615 QDMTILILDHCEYLTHIPDVSGLSNLEKLSF-EYCKNLITIHNSI----GHLNKLERLSA 669

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD--- 516
            G R+    P             P G  L SLKEL L  C +LK FP++ C + ++D   
Sbjct: 670 FGCRTLKRFP-------------PLG--LASLKELKLSCCYSLKSFPKLLCKMTNIDKIW 714

Query: 517 LKETAIEELPSSIGNLSRL---------VDLDLTNCSGLKSVSSRLCNLK 557
              T+I ELPSS  NLS L         + ++L +C  L+ +     NL+
Sbjct: 715 FWYTSIRELPSSFQNLSELDELSVREFGIHINLYDCKSLEEIRGIPPNLE 764


>gi|255542420|ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223548234|gb|EEF49725.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 216/528 (40%), Positives = 290/528 (54%), Gaps = 57/528 (10%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSF G D   NF  HL AAL    I TF  D  + RG  +      A++ SK+ +V
Sbjct: 11  YRVFLSFSGDDTGKNFSDHLYAALEHSGIHTFRGDYGVERGEIVDAEFQKAMQQSKLCLV 70

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FS+ YASS WCL ELVKI+E +   G IV+PVFY  DP+        Y  +        
Sbjct: 71  VFSKDYASSIWCLEELVKIMEVRKNGGLIVMPVFYDADPNQVWEQSGSYAKAFAIHEEME 130

Query: 124 -------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                  W  +    T           E+  I+  V  +  +L++         LVG++S
Sbjct: 131 EMEKVQRWRAVLREITDLSGMDLQQRHEAEFIQDIVKLVENRLNESVSMHVPSFLVGIDS 190

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            +K+I   L  GST+     I+GIGG+GKTTIA  +Y+     F+GS F+ N+R  S++ 
Sbjct: 191 RVKDINLWLQDGSTDPGIAIIYGIGGVGKTTIAKTVYNLNLDRFKGSCFLANVRKASKEP 250

Query: 227 GGLANIHLNF-ERRR--------------------LSRMKVLIVFYDLTDLKQIDLLIGR 265
            GL  +     E+ R                    +S  +VLIV  D+ +L Q++  IG 
Sbjct: 251 NGLIFLQKQLVEKFRNGKENKIDSVDEGSIKVIDVISCKRVLIVLDDVDELDQLNAFIGT 310

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            +    GS++I+TTR  +LL  H   +    F VKEL  NDSL LFS +AF QNHP  G+
Sbjct: 311 WNSLFQGSKIIVTTRHERLLNPHDTQK---KFRVKELDDNDSLQLFSWHAFRQNHPIEGY 367

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL- 384
            E S  V+K+  GVPLAL+VLGSYL     +EWES + KLK +PH  IQK L++SYD L 
Sbjct: 368 KEHSESVVKHCCGVPLALEVLGSYLSDKMADEWESELEKLKAIPHPKIQKSLQISYDSLQ 427

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDL 443
           DD+ +N+FL  ACFF G D+  V+  LD C   AK+GI  L+ + LVTI+ +NK+ MH L
Sbjct: 428 DDKYKNLFLHIACFFTGRDKDYVVKVLDGCELYAKVGIQNLIDRHLVTINKDNKLMMHPL 487

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD 489
           L++MG EIVRQES + PG RSRLWH ED   VL EN  T    G+ LD
Sbjct: 488 LRDMGREIVRQESPEHPGSRSRLWHHEDTLTVLRENIGTEAIRGLTLD 535



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 47/216 (21%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETA-IEELPSSIGNLSRL 535
            S P    L +L+ L L  C NL    +   N+E L   +LK+   + +LP  I  L  L
Sbjct: 685 VSTPDLSGLPNLERLKLKSCINLVEVHKSIENLEKLVLLNLKDCKRLRKLPRKIVLLRSL 744

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG-------------------------CLKL 570
             L L+ CS L  +SS L  ++SL+ L++ G                          L L
Sbjct: 745 EKLILSGCSELDKLSSELRKMESLKVLHMDGFKHYTAKSRQLTFWSWLSRRQGMDSSLAL 804

Query: 571 EKLP-----------------EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
             LP                  ++  L SL+ LNL+      +P ++  L+KL  L L N
Sbjct: 805 TFLPCSLDHLSLADCDLSDDTVDLSCLSSLKCLNLSGNSISCLPKTISGLTKLESLVLDN 864

Query: 614 CKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLT 648
           C+ LQSL ELP     ++A +CTSL+ ++N   L+T
Sbjct: 865 CRSLQSLSELPASLRELNAENCTSLERITNLPNLMT 900



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 6/142 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L       L   P++S   N+E L LK    + E+  SI NL +LV L+L +C 
Sbjct: 670 LKQLKILDFSHSYGLVSTPDLSGLPNLERLKLKSCINLVEVHKSIENLEKLVLLNLKDCK 729

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ +  ++  L+SL +L LSGC +L+KL  E+  +ESL+ L++    F+   +  +QL+
Sbjct: 730 RLRKLPRKIVLLRSLEKLILSGCSELDKLSSELRKMESLKVLHM--DGFKHYTAKSRQLT 787

Query: 605 KLSDL-RLQNCKRLQSLPELPC 625
             S L R Q      +L  LPC
Sbjct: 788 FWSWLSRRQGMDSSLALTFLPC 809



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 490 SLKELYLGGCSNLKRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           SL  L L  C       ++SC  +++ L+L   +I  LP +I  L++L  L L NC  L+
Sbjct: 810 SLDHLSLADCDLSDDTVDLSCLSSLKCLNLSGNSISCLPKTISGLTKLESLVLDNCRSLQ 869

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           S+S       SLR LN   C  LE++   + NL +   LNLA
Sbjct: 870 SLSELPA---SLRELNAENCTSLERIT-NLPNLMTSLRLNLA 907


>gi|357449991|ref|XP_003595272.1| Heat shock protein [Medicago truncatula]
 gi|355484320|gb|AES65523.1| Heat shock protein [Medicago truncatula]
          Length = 1805

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 258/708 (36%), Positives = 380/708 (53%), Gaps = 97/708 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG D R+NF   L   L +  I TF D++ + +G EI+PSL  AI+ S+I IV
Sbjct: 15  YDVFISFRGIDTRNNFTRDLYDILDQNGIHTFFDEQEIQKGEEITPSLLQAIQQSRIFIV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS  YASS +CLNELV ILE  N +G++ +PVFY VDPS        Y  +L       
Sbjct: 75  VFSNNYASSTFCLNELVMILECSNTHGRLFLPVFYDVDPSQVRHQSGAYGDALKKHEKRF 134

Query: 123 -------------------GWMGIFDIPTSESVLIEGNVNDISKKL--SDLFPSDNKDQL 161
                              GW        SE   I   V +++KK+  + L  +DN    
Sbjct: 135 SDDKVQKWRDALCQAANVSGW-DFQHGSQSEYKFIGNIVEEVTKKINRTTLHVADNP--- 190

Query: 162 VGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           V +E  + E+ S L SG  +  N VGI+GIGG+GK+T+A A+Y++IS  F+G  F+  IR
Sbjct: 191 VALEYPMLEVASLLGSGPEKGTNMVGIYGIGGVGKSTLARAVYNHISDQFDGVCFLAGIR 250

Query: 221 DESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQI 259
            ES    GLA +                      ++  +RRL R KVL+V  D+  + QI
Sbjct: 251 -ESAINHGLAQLQETLLSEILGEEDIRIRDVYRGISIIKRRLQRKKVLLVLDDVDKVNQI 309

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L G  D F PGS++++TTRD  LL  H    + +++EVK+L++  SL LF+ +AF   
Sbjct: 310 QVLAGGHDWFGPGSKIVVTTRDKHLLAIHE---ILNLYEVKQLNHEKSLDLFNWHAFRNR 366

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                + ++SN  + YA+G+PLAL+V+GS+L G S + W+S+++K +R+ H +I ++LKV
Sbjct: 367 KMDPCYSDISNRAVSYASGLPLALEVIGSHLFGKSLDVWKSSLDKYERVLHKEIHEILKV 426

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-I 438
           SYD LDD+++ IFLD ACFF   +       L    FSA+ GI  L  KSL+ +  N  +
Sbjct: 427 SYDDLDDDQKGIFLDIACFFNSYEMSYAKEMLYLHGFSAENGIQVLTDKSLIKVDGNGCV 486

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKEL 494
            MHDL+Q+MG EIVRQES  +PG+RSRLW  +DI  VL  NT   T     +NL + KE+
Sbjct: 487 RMHDLVQDMGREIVRQESTVEPGRRSRLWFDDDIVHVLETNTGTDTIEVIIMNLCNDKEV 546

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKS------ 548
              G    K F ++  N++ L ++       P  + N  R++D +      L +      
Sbjct: 547 QWSG----KAFNKMK-NLKILIIRSARFSRGPQKLPNSLRVLDWNGYPSQSLPADFNPKN 601

Query: 549 -----------VSSRLCNL-KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
                      VS +L  + +SL  L+  GC  L +LP  +  L +L  L L +  +  +
Sbjct: 602 LMILSLPESCLVSFKLLKVFESLSFLDFKGCKLLTELP-SLSGLVNLGALCLDDCTNLIR 660

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTL 640
           I  S+  L+KL  L  Q CK+L+ L     LP   ++  R C+ LK+ 
Sbjct: 661 IHESIGFLNKLVLLSSQRCKQLELLVPNINLPSLETLDIRGCSRLKSF 708



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 8/162 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            +SL  L   GC  L   P +S   N+  L L + T +  +  SIG L++LV L    C 
Sbjct: 621 FESLSFLDFKGCKLLTELPSLSGLVNLGALCLDDCTNLIRIHESIGFLNKLVLLSSQRCK 680

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ +   + NL SL  L++ GC +L+  PE +G +E++ Y+ L +    K+P S++ L 
Sbjct: 681 QLELLVPNI-NLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLV 739

Query: 605 KLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSN 642
            L  + L+ C  L  LP+    LP    I A  C   +   +
Sbjct: 740 GLRQMFLRECMSLTQLPDSIRILPKLEIITAYGCRGFRLFED 781



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDL 538
           L   INL SL+ L + GCS LK FPE+     NI  + L +T+I +LP SI NL  L  +
Sbjct: 685 LVPNINLPSLETLDIRGCSRLKSFPEVLGVMENIRYVYLDQTSIGKLPFSIRNLVGLRQM 744

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGC--LKLEKLPEEIGN 579
            L  C  L  +   +  L  L  +   GC   +L +  E++G+
Sbjct: 745 FLRECMSLTQLPDSIRILPKLEIITAYGCRGFRLFEDKEKVGS 787


>gi|356560037|ref|XP_003548302.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1083

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 253/732 (34%), Positives = 363/732 (49%), Gaps = 127/732 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+ + S+  I    +DVFLSFRG D RH F  +L  AL    I T IDD+ L RG+EI+
Sbjct: 1   MAAKTRSLASI----YDVFLSFRGLDTRHGFTGNLYKALDDRGIYTSIDDQELPRGDEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
           P+LS AI+ S+I+I + S+ YASS +CL+ELV IL  K++ G +V+PVFY VDPSD  + 
Sbjct: 57  PALSKAIQESRIAITVLSQNYASSSFCLDELVTILHCKSE-GLLVIPVFYKVDPSDVRHQ 115

Query: 119 -------------------------------CPSLGWMGIFDIPTSESVLIEGNVNDISK 147
                                             L      D    E   I   V ++S+
Sbjct: 116 KGSYGEAMAKHQKRFKAKKEKLQKWRMALKQVADLSGYHFEDGDAYEYKFIGSIVEEVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           K+S        D  VG+ES + E+   L  GS +  + +GI G+GG+GKTT+A  +Y+ I
Sbjct: 176 KISRA-SLHVADYPVGLESQVTEVMKLLDVGSDDLVHIIGIHGMGGLGKTTLALEVYNLI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHLNFER-------RRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I L   +        RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASTIQHRLQRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  ++GR D F PGSRVIITTRD  LLK H   R    +EVK L++N 
Sbjct: 295 LLILDDVNKREQLKAIVGRPDWFGPGSRVIITTRDKHLLKCHEVERT---YEVKVLNHNA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L + NAF +      + ++ N V+ YA+G+PLAL+++GS + G S   WESAV   K
Sbjct: 352 ALQLLTWNAFKREKIDPSYEDVLNRVVTYASGLPLALEIIGSNMFGKSVAGWESAVEHYK 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGI 422
           R+P+ +I ++LKVS+D L +E++N+FLD A   KG      ++++ +  D C    K  I
Sbjct: 412 RIPNDEILEILKVSFDALGEEQKNVFLDIAFCLKGCKLTEVEHMLCSLYDNC---MKHHI 468

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--T 480
             LV KSL+ + +  + MHDL+Q +G EI RQ S ++PGKR RLW P+DI  VL +N  T
Sbjct: 469 DVLVDKSLIKVKHGIVEMHDLIQVVGREIERQRSPEEPGKRKRLWLPKDIIHVLKDNTGT 528

Query: 481 SLPTGINLD----------SLKELYLGGCSNLK--------------RFPE--------- 507
           S    I LD             E       NLK               FPE         
Sbjct: 529 SKIEIICLDFSISYKEETVEFNENAFMKMENLKILIIRNGKFSKGPNYFPEGLRVLEWHR 588

Query: 508 ---------------ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
                          + C + D  +K     E   S   L  L  L    C  L  +   
Sbjct: 589 YPSNFLPSNFDPINLVICKLPDSSIKSF---EFHGSSKKLGHLTVLKFDRCKFLTQIPD- 644

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRL 611
           + +L +LR L+   C  L  + + IG L+ L+ L+    +     P     L+ L  L+L
Sbjct: 645 VSDLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSAYGCRKLTSFPPL--NLTSLETLQL 702

Query: 612 QNCKRLQSLPEL 623
            +C  L+  PE+
Sbjct: 703 SSCSSLEYFPEI 714



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 73/157 (46%), Gaps = 16/157 (10%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIEELPS------SIGNLSRLVDLDL 540
           L  L  L    C  L + P++S    DL +L+E + E+  S      SIG L +L  L  
Sbjct: 625 LGHLTVLKFDRCKFLTQIPDVS----DLPNLRELSFEDCESLVAVDDSIGFLKKLKKLSA 680

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             C  L S      NL SL  L LS C  LE  PE +G +E++  L L     +++P S 
Sbjct: 681 YGCRKLTSFPP--LNLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSF 738

Query: 601 KQLSKLSDLRLQNCKRLQ---SLPELPCGSSIHARHC 634
           + L+ L  L L  C  +Q   SL  +P  SS +  +C
Sbjct: 739 QNLTGLRLLALSGCGIVQLPCSLAMMPELSSFYTDYC 775



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 87/206 (42%), Gaps = 39/206 (18%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  +NL SL+ L L  CS+L+ FPEI     NI +L L    I+ELP S  NL+ L 
Sbjct: 687 TSFPP-LNLTSLETLQLSSCSSLEYFPEILGEMENIRELRLTGLYIKELPFSFQNLTGLR 745

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE-------------------- 576
            L L+ C G+  +   L  +  L       C + + +  E                    
Sbjct: 746 LLALSGC-GIVQLPCSLAMMPELSSFYTDYCNRWQWIELEEGEEKLGSIISSKAQLFCAT 804

Query: 577 ------------IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL- 623
                             + YLNL+  +F  +P   K+L  L  L + +C+ LQ +  L 
Sbjct: 805 NCNLCDDFFLAGFKRFAHVGYLNLSGNNFTILPEFFKELQFLRTLDVSDCEHLQEIRGLP 864

Query: 624 PCGSSIHARHCTSLKTLSNSSTLLTR 649
           P      AR+C S  T S++S LL +
Sbjct: 865 PILEYFDARNCVSF-TSSSTSMLLNQ 889


>gi|449443187|ref|XP_004139362.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
           [Cucumis sativus]
          Length = 902

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 246/685 (35%), Positives = 352/685 (51%), Gaps = 101/685 (14%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVFLSFRG+D R NF SHLN AL +  I  FID KL+RG EI  SL  AIEGSKISIV+ 
Sbjct: 18  DVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDKKLSRGEEICASLLEAIEGSKISIVVI 77

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSESV 136
           SE YASS WCLNELVKI+  K   GQ+V+P+FY VDPS+ G        G F     E+ 
Sbjct: 78  SESYASSSWCLNELVKIIMCKELRGQVVLPIFYKVDPSEVG-----KQSGRFGEEFDEAN 132

Query: 137 LIEGNVNDISKKLS-DLFPSDNKDQLVGVESIIKEIESQLLS-GSTEFNTVGIWGIGGIG 194
           LI+  V ++ KKL       D     VG++  +  +   ++S G T F   G++G+GG+G
Sbjct: 133 LIQNIVQEVWKKLDRATMQLDVAKYPVGIDIQVSNLLPHVMSNGITMF---GLYGVGGMG 189

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH--------------------- 233
           KTTIA A+Y+ I+  FEG  F+ NIR+ S + GGL                         
Sbjct: 190 KTTIAKALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLCEILMDDSIKVSNLPRG 249

Query: 234 LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
           +   R RL   K+L++  D+   +Q+  L G  D F  GS+VI TTR+ QLL  H   ++
Sbjct: 250 ITIIRNRLYSKKILLILDDVDTREQLQALAGGHDWFGHGSKVIATTRNKQLLVTHGFDKM 309

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
            +   V  L Y+++L LFS + F  +HP   +LELS   + Y  G+PLAL+VLGS+L  +
Sbjct: 310 QN---VGGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCKGLPLALEVLGSFLHSI 366

Query: 354 SE--------EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQY 405
            +        +E+E      K     DIQ  L++SYDGL+DE + IF   +C F   D  
Sbjct: 367 GDPSNFKRILDEYE------KHYLDKDIQDSLRISYDGLEDEVKEIFCYISCCFVREDIC 420

Query: 406 LVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRS 464
            V   +  C    + GI++L+  SL+TI   N++ MH+++Q+MG  I   E+ K   KR 
Sbjct: 421 KVKMMVXLC---LEKGITKLMNLSLLTIGRFNRVEMHNIIQQMGRTIHLSETSKS-HKRK 476

Query: 465 RLWHPEDIYQVLNENTSL------------PTGINLDS--------LKELYLGGCS---- 500
           RL   +D   VLN N               PT +++DS        L  L +G  +    
Sbjct: 477 RLLIKDDAMDVLNGNKEARAVKVIKLNFPKPTKLDIDSRAFDKVKNLVVLEVGNATSSES 536

Query: 501 -------------NLKRFPEISC-------NIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
                        N  +FP  S        N+ +L L  ++I+       +  RL +++L
Sbjct: 537 STLEYLPSSLRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIKHFGQGYMSCERLKEINL 596

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE--KDFEKIPS 598
           ++ + L  +   L    +L+ LNL GC  L K+ E IG+L  L  L+ +   K FE+ PS
Sbjct: 597 SDSNLLVEIPD-LSTAINLKYLNLVGCENLVKVHESIGSLSKLVALHFSSSVKGFEQFPS 655

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL 623
            +K L  L  L ++NC+  +  P+ 
Sbjct: 656 CLK-LKSLKFLSMKNCRIDEWCPQF 679


>gi|227438255|gb|ACP30617.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1297

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 248/718 (34%), Positives = 372/718 (51%), Gaps = 95/718 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G+DVR  F+SH    L R  I  F D+++ R   I+P L  AI  S+I++V+
Sbjct: 99  YDVFPSFSGEDVRKTFLSHFLRELERNSIVAFKDNEMERSQSIAPELVQAIRDSRIAVVV 158

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YCPSLG 123
           FS+ YASS WCLNEL++IL+   ++GQ+V+P+FY +DPS       D G      C +  
Sbjct: 159 FSKNYASSSWCLNELLEILQCNEEFGQLVIPIFYGLDPSHLRKQTGDFGEAFKKTCLNQT 218

Query: 124 ------W-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNK-DQLVGVE 165
                 W   + ++            SE+ +IE   NDI  KL D+ PS N+ +  VG++
Sbjct: 219 HEVEDQWKQALTNVANILGYHSKNCDSEAAMIEEISNDILGKL-DVTPSSNEFEDFVGIK 277

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM-QNIRDESE 224
             I E+   +   S E   VGIWG  GIGKTTIA A++ NIS+ F+ S F+ +    +S 
Sbjct: 278 DHIAEVILLMNLESKEVKMVGIWGTSGIGKTTIARALFCNISNQFQRSVFIDRAFISKSV 337

Query: 225 KVGGLAN---------IHLNF-----ERR---------RLSRMKVLIVFYDLTDLKQIDL 261
           +V G AN         + +NF     ER+         RL   KVLIV  DL D   +D 
Sbjct: 338 EVYGRANPVDYNMKLRLRMNFLSEILERKNMKIGAMEERLKHQKVLIVIDDLDDQYVLDA 397

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G+   F  GSR+I+ T D QLLK H    +  ++EV   S   +L +F R+AF Q+ P
Sbjct: 398 LAGQTKWFGSGSRIIVVTTDKQLLKAHG---IDSIYEVGLPSDEQALEMFCRSAFRQDSP 454

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             G +E ++ V++ A  +PL L VLGS L+G+++E+  + + +L+R     I++ L+V Y
Sbjct: 455 PDGLMEFASEVVECAGSLPLGLDVLGSSLRGLNKEDCLNMLPRLRRSLDGKIEETLRVGY 514

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           DGL  E++ IF   AC F   D   +  FL        IG++ LV KSL+ +   K+ MH
Sbjct: 515 DGLLGEDKAIFRHIACLFNHVDVKDIKLFLADSELDVDIGLNNLVNKSLIQVRWGKVEMH 574

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKELYL- 496
            LLQEMG  +V  +SIK P KR  L   +DI  VL+E+      L   +N+D + EL + 
Sbjct: 575 HLLQEMGRNVVWLQSIKKPQKREFLVDSKDICDVLSESIGTSKLLGISLNVDEIDELQVH 634

Query: 497 ----GGCSNL---------------------KRFPEISCNIEDLDLKETAIEELPSSIGN 531
                G  NL                     K F  +   ++ L      +  +PS++  
Sbjct: 635 ETAFKGMRNLHFLEIYSNKVRVVNGDKLKLPKSFDWLPPKLKLLCWSGYPMRCMPSTLCT 694

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
             RLV L + N S L+ +   + +L  L  ++L G   L+++P ++    +LE LNL   
Sbjct: 695 -DRLVKLKMRN-SKLERLWKGVMSLTCLIEMDLCGSHDLKEIP-DLTTATNLETLNLQSC 751

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           +   ++PSS++ L+KL  L +Q CK+L++LP    L     I+   C+ L+T    ST
Sbjct: 752 RSLVELPSSIRNLNKLIKLDMQFCKKLKTLPTGINLKSLDHINLSFCSQLRTFPKIST 809



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 104/229 (45%), Gaps = 58/229 (25%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS--IGNLSR---- 534
            +LPTGINL SL  + L  CS L+ FP+IS NI  L L+ET++ E P++  + NL +    
Sbjct: 780  TLPTGINLKSLDHINLSFCSQLRTFPKISTNISYLFLEETSVVEFPTNLHLKNLVKLHMS 839

Query: 535  ------------------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
                                    L +L L N   L  + S   NL  LR L +S C  L
Sbjct: 840  KVTTNKQWKMFQPLTPFMPMLSPTLTELYLFNIPSLVELPSSFRNLNKLRDLKISRCTNL 899

Query: 571  EKLPEEIG--NLESLEY------------------LNLAEKDFEKIPSSMKQLSKLSDLR 610
            E LP  I   +LESL++                  LNL+    E++P  ++  SKL +L 
Sbjct: 900  ETLPTGINLKSLESLDFTKCSRLMTFPNISTNISVLNLSYTAIEEVPWWVEIFSKLKNLN 959

Query: 611  LQNCKRLQ-------SLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSS 651
            ++ C +L+        LP L    S   A +   L + ++SS L+T +S
Sbjct: 960  MECCSKLEYVHPNISKLPRLAVDFSHCEALNIADLSSRTSSSELITDAS 1008


>gi|359493388|ref|XP_003634583.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1196

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 251/718 (34%), Positives = 374/718 (52%), Gaps = 127/718 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           ++DV LSFRG+D R+NF SHL  AL    IETFIDD+ L RG EI+P L  AIEGS+I++
Sbjct: 19  RYDVVLSFRGEDTRNNFTSHLYKALDHANIETFIDDEGLPRGEEIAPELLKAIEGSRIAL 78

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------ 115
           ++FS+ YA S+WCL+ELVKI+E + + GQ V P+FY V+PS+                  
Sbjct: 79  IVFSKTYAHSKWCLDELVKIMECEKEKGQQVFPIFYHVEPSEVRNQTGIYGEAFNNHERN 138

Query: 116 -------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSD 156
                              AG          F+    + ++  G +  ++ KL  +    
Sbjct: 139 ADEEKKKKKIEQWRTALRKAGNLSGFPLQDRFESEFIQEII--GEIRRLTPKLVHV---- 192

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
             + +VG++  +KE+E  + + S   + VGI+GIGGIGKTTIA  +Y+++   F+   F+
Sbjct: 193 -GENIVGMDENLKEVELLINAQSNGVSMVGIYGIGGIGKTTIAKVVYNDMLDQFQRHSFL 251

Query: 217 QNIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTD 255
           +N+R++S+   GL  +                      +   +R+    KVLIV  D+  
Sbjct: 252 ENVREKSKDDHGLLELQKKLLCDILMEKNLKLRNINDGIKMVKRKCRIEKVLIVLDDVDC 311

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
            KQ+  L    + F  GS +I+TTR+ + L  H+       +E K L++  +  LF  NA
Sbjct: 312 QKQLKFLAPNSECFHQGSIIIVTTRNKRCLDVHKSYSS---YEAKGLAHTQAKELFCWNA 368

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F Q+HP   + +LSN ++ YA G+PLAL VLGS+L     + WES ++KLK  P  DIQK
Sbjct: 369 FQQDHPE--YEDLSNCILDYAKGLPLALVVLGSFLYQRDVDYWESTLHKLKTNPLEDIQK 426

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           VL++SYDGLD++ + +FLD ACFF+  D+ +V   L+ C+F  K G++ L  + L++I++
Sbjct: 427 VLQISYDGLDNKWKELFLDIACFFRNEDKKVVTRILEGCKFHPKSGLTVLHERCLISITD 486

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINL----D 489
           + I MHDLLQEMG  IVRQ   + P + SRLW  +DI  VL  N+ T    GI++    D
Sbjct: 487 DTIRMHDLLQEMGWAIVRQNFPEHPEEWSRLWELQDIKSVLPQNKGTKNIEGISINRSWD 546

Query: 490 SLKELYLGGCS----NLKRFPEISC-------------------NIEDLDLKETAIEELP 526
           S K + L   +    N  R  ++                     N  +L+L  + IE L 
Sbjct: 547 SKKRIQLTAEAFRKMNRLRLLKVKVYFHWDNYPLEYLPSNFHVENPVELNLWYSNIEHLW 606

Query: 527 SSIGNLS----RLVDL-------DLTNCSG--------LKSVSSRLCNLKSLRRLNLSGC 567
              GN+     ++ DL       D++N S         LK  +  L +L  L  L+LS C
Sbjct: 607 E--GNMPAKKLKVTDLSYSRHLVDISNISSMQNLETLILKGCTRLLKHLNGLEELDLSNC 664

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKD----FEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             L  LP+ IG+L SL+ L+L E      F  I  ++  L  L  L L  C+ L+SLP
Sbjct: 665 KNLLSLPDSIGSLNSLQTLDLVECSKLVGFTNI--NIGSLKALEYLDLSWCENLESLP 720



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 23/172 (13%)

Query: 478  ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            E   L    +L SL+ L LG       FP ++  I D              I +LS LV 
Sbjct: 852  EEDILSGSFHLSSLQILSLGN------FPSVAEGILD-------------KIFHLSSLVK 892

Query: 538  LDLTNCSGLKS-VSSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEK 595
            L LT C   +  +   + NL  L++L+L  C  +E K+   I +L SLE L L    F  
Sbjct: 893  LSLTKCKPTEEGIPGDIWNLSPLQQLSLRDCNLMEGKILNHICHLTSLEELYLGWNHFSS 952

Query: 596  IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
            IP+ + +LS L  L L +CK LQ +PELP        HC+    +S+S +LL
Sbjct: 953  IPAGISRLSNLKALDLSHCKNLQQIPELPSSLRFLDAHCSD--GISSSPSLL 1002



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 31/168 (18%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSG 545
           ++ +L+ L L GC+ L +       +E+LDL     +  LP SIG+L+ L  LDL  CS 
Sbjct: 634 SMQNLETLILKGCTRLLKHLN---GLEELDLSNCKNLLSLPDSIGSLNSLQTLDLVECSK 690

Query: 546 LKSVSS-RLCNLKSLRRLNLS------------------------GCLKLEKLPE-EIGN 579
           L   ++  + +LK+L  L+LS                        GC KL+  P+   G+
Sbjct: 691 LVGFTNINIGSLKALEYLDLSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDINFGS 750

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
           L++LE L+ +  ++ E +P S+  LS L  L + NC +L+ + E+  G
Sbjct: 751 LKALELLDFSHCRNLESLPVSIYNLSSLKTLGITNCPKLEEMLEIKLG 798



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 7/119 (5%)

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-EIGNLESLEYLN 587
           + +L+ L +LDL+NC  L S+   + +L SL+ L+L  C KL       IG+L++LEYL+
Sbjct: 650 LKHLNGLEELDLSNCKNLLSLPDSIGSLNSLQTLDLVECSKLVGFTNINIGSLKALEYLD 709

Query: 588 LAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS-----SIHARHCTSLKTL 640
           L+  ++ E +P+S+  LS L  L L  C +L+  P++  GS      +   HC +L++L
Sbjct: 710 LSWCENLESLPNSIGSLSSLQTLLLIGCSKLKGFPDINFGSLKALELLDFSHCRNLESL 768


>gi|356561381|ref|XP_003548960.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 873

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 260/712 (36%), Positives = 381/712 (53%), Gaps = 85/712 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEIS 59
           M+SSS S       K+DVFLSFRG D RH F  HL  AL    I TFID ++L RG EI+
Sbjct: 1   MSSSSISYGW----KYDVFLSFRGSDTRHGFTGHLYKALLDRGIYTFIDNEELQRGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           PSL  AIE S+I+I++FS+ YASS +CL+ELV IL    + G +V+PVFY VDPSD    
Sbjct: 57  PSLVKAIEDSRIAILVFSKNYASSTFCLDELVHILACVKEKGTMVLPVFYEVDPSDVRHQ 116

Query: 116 -AGYCPSLGW-----------MGIFDIPTSESVLIEGN----------------VNDISK 147
              Y  +L             +  + I   ++  + G                 + ++S+
Sbjct: 117 RGSYEEALNKHKEKFNDDEEKLQKWRIALRQAANLSGYHFKHGNENEYDFVGKIIKEVSQ 176

Query: 148 KLS--DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
           ++S   L  ++N   LVG+ES +  + S L         VGI GIGG+GKTTIA  +Y+ 
Sbjct: 177 RISRTHLHVANN---LVGLESRVLHVTSLLDDKYDGVLMVGIHGIGGVGKTTIAREVYNL 233

Query: 206 ISSHFEGSYFMQNIRDESEKVG------------------GLANIH--LNFERRRLSRMK 245
           I+  FE   F+ N+R+ S K G                   L ++H  +   + R    K
Sbjct: 234 IADQFEWLCFLDNVRENSIKHGLVHLQKTLLSKTIGESSIKLGSVHEGIPIIKHRFLLKK 293

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VL+V  D+ DL Q+  ++G  D F   SRVIITTRD  LL  H    V   +EV  L+  
Sbjct: 294 VLLVVDDVDDLDQLQAIVGGTDWFGSASRVIITTRDKHLLTCHG---VTSTYEVDGLNKE 350

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           ++L L S  AF  +     ++ + N V+ YA+G+PLAL V+GS L G S EEWES++++ 
Sbjct: 351 EALKLLSGTAFKIDKVDPCYMRILNRVVTYASGLPLALMVIGSNLFGKSIEEWESSIDQY 410

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISR 424
           +R+P+  IQ VLKVS+D L+++EQ IFLD AC FKG     V   L     F  +  I  
Sbjct: 411 ERIPNKKIQDVLKVSFDSLEEDEQQIFLDIACCFKGYALTYVKEILSTHHNFCPEYAIGV 470

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP- 483
           L+ KSL+ +  +++ +HDL+++MG EIVRQES ++PGKRSRLW P+DI +VL EN  +  
Sbjct: 471 LIDKSLIKVDADRVILHDLIEDMGKEIVRQESPREPGKRSRLWFPDDIVEVLEENKGISR 530

Query: 484 -TGINLDSLKELYLGGCS-NLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL------ 535
              I LD LK  Y      +   F E++ N++ L ++   + E P  + N  R+      
Sbjct: 531 IQMITLDYLK--YEAAVEWDGVAFKEMN-NLKTLIIRSGCLHEGPIHLPNSLRVLEWKVY 587

Query: 536 ------VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
                 +D +      LK   S L +L  L+   LS C  LE  PE +G +E++  L++ 
Sbjct: 588 PSPSLPIDFNPKKLVILKFPYSCLMSLDVLKSKKLSYCHSLESFPEVLGKMENVTSLDIY 647

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
               +++P S++ L++L  L L  C+ L+ +  +P    +   + C+SLK L
Sbjct: 648 GTVIKELPFSIQNLTRLRRLELVRCENLEQIRGVPPNLETFSVKDCSSLKDL 699



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 25/159 (15%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLSRLVDLDLTN 542
           ++LD LK   L  C +L+ FPE+   +E+   LD+  T I+ELP SI NL+RL  L+L  
Sbjct: 612 MSLDVLKSKKLSYCHSLESFPEVLGKMENVTSLDIYGTVIKELPFSIQNLTRLRRLELVR 671

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C  L+ +     NL++    ++  C  L+ L                  D   +PS  K+
Sbjct: 672 CENLEQIRGVPPNLETF---SVKDCSSLKDL------------------DLTLLPSWTKE 710

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTL 640
              L +LRL   K LQ++  +     +    +CTSLK L
Sbjct: 711 RHLLKELRLHGNKNLQNIKGIQLSIEVLSVEYCTSLKDL 749


>gi|359493220|ref|XP_002264441.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1481

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 224/552 (40%), Positives = 311/552 (56%), Gaps = 74/552 (13%)

Query: 14  PKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKIS 72
           P +DVFLSFRG+D R NF  +L   L R  I+TF DD+ L +G  I+  L  AIE S+I 
Sbjct: 18  PNYDVFLSFRGEDTRKNFTDYLYTTLVRHGIQTFRDDEELEKGGVIASDLLRAIEESRIF 77

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF---- 128
           I+IFS+ YA SRWCLNELVKI E   + G +V+P+FY VDPSD          GIF    
Sbjct: 78  IIIFSKNYADSRWCLNELVKITECARQKGSMVLPIFYHVDPSDIR-----KQSGIFGDAF 132

Query: 129 -------------DIPTSESVLIEG------NVND------ISKKLSDLFPSDNKDQL-V 162
                         I    + L E       +V+D      IS+ +  +  S N+  L V
Sbjct: 133 THHERDADEEKKETIQKWRTALTEAANLSGCHVDDQYETEVISEIVDQIVGSLNRQPLNV 192

Query: 163 G--VESIIKEIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQ 217
           G  +  I   +E   L  +TE N V + GI G G   KTTIA AIY+ IS  ++GS F++
Sbjct: 193 GKNIVGISVHLEKLKLMMNTELNKVRVIGICGPGGIGKTTIAQAIYNEISYQYDGSSFLR 252

Query: 218 NIRDESE-----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQ 258
           N+R+ S+                 K   ++NI   +N  +R L+  +VL++F D+ +L Q
Sbjct: 253 NVRERSKGDTLQLQNELLHGILKGKGFKISNIDEGVNMIKRCLNSKRVLVIFDDVDELTQ 312

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L    D F   S +IIT+RD Q+L  +    V   +EV + +  +++ LFS  AF +
Sbjct: 313 LEYLADEKDWFKVKSTIIITSRDKQVLAQYG---VDTPYEVHKFNEKEAIELFSLWAFKE 369

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           N P   +  LS  +I+YA+G+PLAL++LG+ L G    EWESA+ KLKR+PHM+I KVL+
Sbjct: 370 NLPKGAYKNLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLR 429

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           +S+DGLDD ++ IFLD ACFFKG D+  V   L      A+ GI+ L  K L+TIS N I
Sbjct: 430 ISFDGLDDMDKEIFLDVACFFKGKDKDFVSRILGP---HAEYGIATLNDKCLITISKNMI 486

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGG 498
            MHDL+Q+MG EI+RQE  +D G+RSR+W   D Y VL  N      +   ++K L+L  
Sbjct: 487 DMHDLIQQMGREIIRQECPEDLGRRSRIWD-SDAYNVLTRN------MGTRAIKALFLNI 539

Query: 499 CS-NLKRFPEIS 509
           C  N  +F E S
Sbjct: 540 CKFNPTQFTEES 551



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 93/162 (57%), Gaps = 7/162 (4%)

Query: 491 LKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSS--IGNLSRLVDLDLTNCSG 545
           L+ L  G CS LKRFPEI  N   + +LDL  TAIEELPSS    +L  L  L    CS 
Sbjct: 692 LQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSK 751

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
           L  +   +C L SL  L+LS C  +E  +P +I  L SL+ LNL   DF  IP+++ QLS
Sbjct: 752 LNKIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLS 811

Query: 605 KLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTL 646
           +L  L L +C+ L+ +PELP    +   H  +L TLS +S L
Sbjct: 812 RLQVLNLSHCQNLEHVPELPSSLRLLDAHGPNL-TLSTASFL 852



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 6/130 (4%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLV 536
            SLPT I     LK     GCS L+ FPEI  +   +E L+L  +AI+E+PSSI  L  L 
Sbjct: 1124 SLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSSIQRLRGLQ 1183

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            DL+L  C  L ++   +CNL SL+ L ++ C +L+KLPE +G L+SLE L++  KDF+ +
Sbjct: 1184 DLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESLHV--KDFDSM 1241

Query: 597  PSSMKQLSKL 606
               +  LS+ 
Sbjct: 1242 NCQLPSLSEF 1251



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 517  LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
             K++ ++ELP  I N   L  L L +C  LKS+ + +C  K L+  + SGC +LE  PE 
Sbjct: 1094 FKDSDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEI 1152

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHAR 632
            + ++E LE L L     ++IPSS+++L  L DL L  C+ L +LPE  C      ++   
Sbjct: 1153 LEDMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTIT 1212

Query: 633  HCTSLKTL-SNSSTLLTRSSKHWDIFNFSNC 662
             C  LK L  N   L +  S H   F+  NC
Sbjct: 1213 SCPELKKLPENLGRLQSLESLHVKDFDSMNC 1243



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLK-ETAIEELP--SSIGNLSR 534
           SLPT  +   L  L L G SN+K   R  ++   ++ ++L     + E+P  SS+ NL  
Sbjct: 612 SLPTNFHAKDLAALILRG-SNIKQLWRGNKLHNKLKVINLSFSVHLTEIPDFSSVPNLEI 670

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           L+   L  C  L+ +   +   K L+ L+   C KL++ PE  GN+  L  L+L+    E
Sbjct: 671 LI---LKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIE 727

Query: 595 KIP--SSMKQLSKLSDLRLQNCKRLQSLP-ELPCGSSI 629
           ++P  SS + L  L  L    C +L  +P ++ C SS+
Sbjct: 728 ELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSL 765


>gi|297741023|emb|CBI31335.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 263/724 (36%), Positives = 370/724 (51%), Gaps = 124/724 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VF+SFRG+D R NF  HL   L    I TF DD+ L +G +I+  L  AIE SKI I+
Sbjct: 19  YEVFISFRGEDTRKNFTDHLYTTLVAYGIHTFRDDEELEKGGDIASDLLRAIEESKIFII 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           IFS  YA+SRWCLNELVKI E   +    ++P+FY V+PSD       Y  +        
Sbjct: 79  IFSTNYANSRWCLNELVKIFECTTQKQSTILPIFYHVNPSDVRKQSGSYGDAFVDHEKDA 138

Query: 123 ---------GWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W    +   S          E+++++   +DI ++L+   P +    +VG
Sbjct: 139 DEKKMEVIQKWRTALNQVASLCGLHVDEQYETLVVKEITDDIIRRLNRK-PLNVGKNIVG 197

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++  +++++S +     E   VGI+GIGGIGKTTIA AIY++IS  F+GS F+ N+R+ S
Sbjct: 198 MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAIYNDISYQFDGSSFLNNVRERS 257

Query: 224 E-----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           +                 K   ++N+   +   +R LS  +VL+VF D+ DL QI+ L  
Sbjct: 258 KDNALQLQQELLHGILKGKSPKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLAE 317

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
               F P SR+IITTR    L  +    V   +EV  L   +++ LFS  AF QN P   
Sbjct: 318 EHSWFGPRSRIIITTRHKHFLTQYG---VKESYEVPILHDAEAIELFSWWAFKQNLPNEI 374

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +  LS  V+ YA G+PLAL+VLGS+L   +  EWESA+ KLK +PHM IQ VLK+SYDGL
Sbjct: 375 YKNLSYQVVDYAKGLPLALEVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGL 434

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD E+ IFLD ACFFKG D+  V   LD   F A+ GI  L  K L++IS NK+ MHDLL
Sbjct: 435 DDVEKGIFLDIACFFKGKDKDFVSRMLDE-DFYAESGIGVLHDKCLISISGNKLDMHDLL 493

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD------------- 489
           Q+MG EIVRQE  K+PG+RSRLW  EDI+ VL  N  +    GI LD             
Sbjct: 494 QQMGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTE 553

Query: 490 ---SLKELYLGGCSNLK------------------------RFPEISCNIEDLDLKETAI 522
               +K+L L    N K                         F   S ++  L     ++
Sbjct: 554 AFAGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSL 613

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS----------------- 565
           + LP        LVDL +   S +K +   +  LKSL+ ++LS                 
Sbjct: 614 KSLPKDFSP-KHLVDLSMPY-SHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNL 671

Query: 566 ------GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
                 GC+ L ++   +G+L+ L +L+L + K   ++PS +     L  L L  C + +
Sbjct: 672 ERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFE 731

Query: 619 SLPE 622
             PE
Sbjct: 732 EFPE 735



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 20/162 (12%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKE--TAIEELPSSIGNLSRLVD 537
           LP+ I N  SL+ L L GCS  + FPE   N+E L +L E  T +  LP S  ++  L  
Sbjct: 709 LPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKK 768

Query: 538 LDLTNCSGL-------KSVSSRLC-------NLKSLRRLNLSGC-LKLEKLPEEIGNLES 582
           L    C          K  S+ +C       NL  L++L+LS C +        +G L S
Sbjct: 769 LSFRGCGPASASWLWSKRSSNSICFTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSS 828

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           LE LNL+  +F  +P+ M  LS L  L L+NCKRLQ+LP+ P
Sbjct: 829 LEDLNLSGNNFVTLPN-MSGLSHLVFLGLENCKRLQALPQFP 869



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L SLK + L     L   P+ S   N+E L L+    + E+  S+G+L +L  L L +C 
Sbjct: 645 LKSLKSMDLSHSKCLIETPDFSGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCK 704

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ + SR+ N KSLR L LSGC K E+ PE  GNLE L+ L+        +P S   + 
Sbjct: 705 MLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMR 764

Query: 605 KLSDLRLQNC 614
            L  L  + C
Sbjct: 765 NLKKLSFRGC 774



 Score = 39.3 bits (90), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 11/121 (9%)

Query: 470 EDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
           ED+    N   +LP    L  L  L L  C  L+  P+   ++EDL L+      LP+  
Sbjct: 830 EDLNLSGNNFVTLPNMSGLSHLVFLGLENCKRLQALPQFPSSLEDLILRGNNFVTLPNMS 889

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           G LS L  L L NC  L+++        S+R LN + C  L       G  ESL+ L   
Sbjct: 890 G-LSHLKTLVLGNCKRLEALPQL---PSSIRSLNATDCTSL-------GTTESLKLLRPW 938

Query: 590 E 590
           E
Sbjct: 939 E 939


>gi|357449963|ref|XP_003595258.1| Heat shock protein [Medicago truncatula]
 gi|355484306|gb|AES65509.1| Heat shock protein [Medicago truncatula]
          Length = 1558

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 252/720 (35%), Positives = 378/720 (52%), Gaps = 94/720 (13%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSL 62
           + +S+++     +DVF+SFRG D R+ F  +L  +L ++ I TF+D++ + +G +I+ +L
Sbjct: 2   TQASLSVSSSFTYDVFISFRGIDTRNTFTGNLYNSLDQKGIHTFLDEEEIQKGEQITRAL 61

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AG 117
             AI+ S+I IV+FS  YASS +CLNEL  ILE  N +G++++PVFY V+PS        
Sbjct: 62  FQAIQQSRIFIVVFSNNYASSTFCLNELAVILECSNTHGRLLLPVFYDVEPSQVRHQSGA 121

Query: 118 YCPSL----------------------------GWMGIFDIPTSESVLIEGNVNDISKKL 149
           Y  +L                            GW        SE   I   V +++KK+
Sbjct: 122 YGDALKKHEERFSDDKDKVQKWRDALCQAANVSGWH-FQHGSQSEYKFIGNIVEEVTKKI 180

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN-IS 207
           +   P    D  VG++  + ++ S L  GS E  N VGI+G GG+GK+T+A A+Y+N +S
Sbjct: 181 NRT-PLHVADNPVGLDYPVLDVASLLGIGSDEGANMVGIYGTGGVGKSTLARAVYNNQLS 239

Query: 208 SHFEGSYFMQNIRDESEKVG--------------------GLANIHLNFERRRLSRMKVL 247
             F+G  F+ +IR+ + K G                    G  N  ++  +RRL   KVL
Sbjct: 240 DQFDGVCFLADIRESTIKHGLVQLQETLLSEILCEKDIRVGNVNRGISIIKRRLQSKKVL 299

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+   KQI +L G  D F  GS++IITTRD  LL  +    +  ++EVK+L+   S
Sbjct: 300 LVLDDIDKAKQIQVLAGGHDWFGSGSKIIITTRDKHLLAING---ILSLYEVKQLNNKKS 356

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LF+  AF  N+    + ++S   + YA G+PLAL+V+GS+L G S   W+ A++K + 
Sbjct: 357 LELFNWYAFKNNNVDPCYGDISKRAVSYAGGLPLALEVIGSHLCGRSLCAWKDALDKYEE 416

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
           +PH DI + LKVSY+ LD++++ IFLD ACFF   +   V   L    F A+ GI  L  
Sbjct: 417 IPHEDIHETLKVSYNDLDEKDKGIFLDIACFFNSYEMSYVKEMLYLHGFKAENGIEVLTD 476

Query: 428 KSLVTISNNK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT-- 484
           KSL+ I +   + MHDL+Q+MG EIVRQES  +PGKRSRLW  +DI  VL ENT   T  
Sbjct: 477 KSLMKIDDGGCVRMHDLVQDMGREIVRQESTLEPGKRSRLWFHDDIIHVLEENTGTDTIE 536

Query: 485 --GINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLV------ 536
              INL + KE+   G    K F ++  N++ L ++     + P  + N  R++      
Sbjct: 537 VIIINLCNDKEVRWSG----KAFKKMK-NLKILIIRSARFSKDPQKLPNSLRVLDWSGYP 591

Query: 537 ------DLDLTNCSGLKSVSSRLCNLK------SLRRLNLSGCLKLEKLPEEIGNLESLE 584
                 D +  N   L    S L + K      SL  L+  GC  L +LP  +  L +L 
Sbjct: 592 SQSLPSDFNPKNLMILSLHESCLISFKPIKAFESLSFLDFDGCKLLTELP-SLSGLVNLW 650

Query: 585 YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTL 640
            L L +  +   I +S+  L+KL  L  Q C +L+ L     LP   ++  R C+ LK+ 
Sbjct: 651 ALCLDDCTNLITIHNSVGFLNKLVLLSTQRCTQLELLVPTINLPSLETLDMRGCSRLKSF 710



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 4/138 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            +SL  L   GC  L   P +S   N+  L L + T +  + +S+G L++LV L    C+
Sbjct: 623 FESLSFLDFDGCKLLTELPSLSGLVNLWALCLDDCTNLITIHNSVGFLNKLVLLSTQRCT 682

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ +   + NL SL  L++ GC +L+  PE +G ++++  + L +   +K+P S+++L 
Sbjct: 683 QLELLVPTI-NLPSLETLDMRGCSRLKSFPEVLGVMKNIRDVYLDQTSIDKLPFSIQKLV 741

Query: 605 KLSDLRLQNCKRLQSLPE 622
            L  L L+ C  L  LP+
Sbjct: 742 GLRRLFLRECLSLTQLPD 759



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 52/106 (49%), Gaps = 28/106 (26%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
           +PT INL SL+ L + GCS LK FPE   +  NI D+ L +T+I++LP SI  L      
Sbjct: 688 VPT-INLPSLETLDMRGCSRLKSFPEVLGVMKNIRDVYLDQTSIDKLPFSIQKLV----- 741

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
                               LRRL L  CL L +LP+ I  L  LE
Sbjct: 742 -------------------GLRRLFLRECLSLTQLPDSIRTLPKLE 768


>gi|359493295|ref|XP_002273513.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 577

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 219/546 (40%), Positives = 306/546 (56%), Gaps = 68/546 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MASS +S       + DVFLSFRG+D R NF  HL +AL    I TF DD+ L RG EI 
Sbjct: 1   MASSGTSS---FQWRWDVFLSFRGEDTRFNFTDHLYSALTSRYIHTFRDDEGLERGGEIQ 57

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           PSL  AIE S IS+V+FSE YA S+WCL+EL KI++   + GQ V+P+FY VDPSD    
Sbjct: 58  PSLLKAIEDSMISVVVFSENYAHSKWCLDELEKIMQCSREKGQKVLPIFYHVDPSDVRKQ 117

Query: 116 --------------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKL 149
                                     A    + G  G   +   ES +I+  V  ISK L
Sbjct: 118 TGSFGEAFARYGRYGNVTEERVLRWRAALSQAGGLAGWHVMHGYESQIIKVIVRRISKML 177

Query: 150 SD----LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
                 LF  DN   LVG+ S ++E+ S L   S +   +GI GI GIGKTT+A  IY+ 
Sbjct: 178 ISRPELLFIGDN---LVGINSRLEEMSSLLCMESNDVRMIGIHGIAGIGKTTLAKGIYNQ 234

Query: 206 ISSHFEGSYFMQNIRDE------------------SEKVGGLANIH--LNFERRRLSRMK 245
           I+  FEG+ F+ N+ +                    EK+  ++NI   ++  ++ L   K
Sbjct: 235 IAHQFEGASFLSNVAEVKEHRGSLKLQRQLLADILGEKIARISNIDEGISLIKKTLCSRK 294

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VLI+  D++ L Q++ L G    F  GSR+IIT+R+  LL       V  ++EV++L   
Sbjct: 295 VLIILDDVSALTQLEFLAGSRHWFGSGSRIIITSRNKHLLDV---LEVDGLYEVQKLKSE 351

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           ++  LFS  AF  +H   GF ELS   + Y +G+PLA++V+G YL+  +E EWE  + KL
Sbjct: 352 EAFKLFSLYAFEADHDD-GFWELSGRALNYCDGLPLAVKVVGGYLRNKTELEWEDELLKL 410

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
             +  + +Q VL++SYD L+  E+++FLD ACFF+G D   V   LD+C FSA IG+  L
Sbjct: 411 TTVGQITVQYVLRLSYDRLEHTEKDLFLDIACFFRGKDSDSVGRILDSCNFSA-IGMKVL 469

Query: 426 VGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
              S ++I +NKI MH L+Q+M  EI+R+ES   PG+RSRLW+PED++ VL + T     
Sbjct: 470 KDCSFISILDNKIEMHGLMQQMEWEIIRRESPGQPGQRSRLWNPEDVHAVLTQKTGTKAI 529

Query: 485 -GINLD 489
            GI+ D
Sbjct: 530 EGISFD 535


>gi|356561376|ref|XP_003548958.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1049

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 270/712 (37%), Positives = 371/712 (52%), Gaps = 109/712 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           M+SSS S       K+DVFLSFRG D RH F  HL  ALC   I TFIDD+ L RG EI+
Sbjct: 1   MSSSSFSYGW----KYDVFLSFRGSDTRHGFTGHLYKALCDRGIHTFIDDEELQRGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P L  AIEGS+I+I +FS+ YASS +CL+ELV IL    + G +V+PVFY VDPSD    
Sbjct: 57  PLLVKAIEGSRIAIPVFSKNYASSTFCLDELVHILACVKEKGTLVLPVFYEVDPSDVRHQ 116

Query: 116 -AGYCPSL----------------------------GWMGIFDIPTSESVLIEGN-VNDI 145
              Y  +L                            G+     I         GN V ++
Sbjct: 117 RGSYKDALNSHKERFNDDQEKLQKWRNSLSQAANLAGYHFKHGIENEYEYDFIGNIVKEV 176

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
           S+K++        D  VG+E  +KE+ S L   S   + VGI G+GG+GKTT+A AIY+ 
Sbjct: 177 SQKINRTV-LHVADYTVGLEFRMKEVNSLLNFKSGGVHMVGIHGVGGVGKTTLARAIYNL 235

Query: 206 ISSHFEGSYFMQNIRDESEKVG--------------------GLANIHLNFERRRLSRMK 245
           I+  FE   F+ N+R+ S K G                    G  N  +   + RL R K
Sbjct: 236 IADQFEVLCFLDNVRENSIKNGLVHLQETLLSKTIGEKGIKLGSINEAIPIIKHRLHRKK 295

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VL+V  D+    Q+  + G +D F  GSRVIITTR+  LL  H    V  ++EV  L++ 
Sbjct: 296 VLLVLDDVDKPDQLHAIAGGMDWFGSGSRVIITTRNRHLLTCHG---VESIYEVHGLNHK 352

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           ++L L S +AF        ++ + N  + YA+G+PLAL+V+GS L G   EEWESA+++ 
Sbjct: 353 EALELLSWSAFKTGKVDPCYVNILNRAVTYASGLPLALKVIGSNLIGKRIEEWESALDQY 412

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISR 424
           +R+P+ DIQ +LKVS+D L++ EQNIFLD AC FKG     V   L +   F  + GI  
Sbjct: 413 QRIPNKDIQDILKVSFDSLEEYEQNIFLDIACCFKGYRLSEVKEILFSHHGFCPQYGIGV 472

Query: 425 LVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TS 481
           L+ KSL+ I     +T+HDL+++MG EIVR+ES ++P  RSRLW PEDI QVL EN  TS
Sbjct: 473 LIDKSLIKIDCFGNVTLHDLIEDMGKEIVRRESPEEPENRSRLWCPEDIVQVLEENKGTS 532

Query: 482 LPTGINLD------------------SLKELYL-GGC--SNLKRFPEISCNIEDLDLKET 520
               I LD                  +LK L + GGC  +  K  P    ++  L+ +  
Sbjct: 533 RIQMIALDYLNYEEVEWDGMAFKEMNNLKTLIIRGGCFTTGPKHLPN---SLRVLEWRRY 589

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVS-----SRLCNLKSLRRLNLSGCLKLEKLPE 575
               LP    N  +LV L L + S L S++     +R  N   +R LN + C  + ++P+
Sbjct: 590 PSPSLPFDF-NPKKLVSLQLPD-SCLTSLNWLNSKNRFLN---MRVLNFNQCHYITEIPD 644

Query: 576 EIG--NLE--SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             G  NL+  S EY     ++  KI  S+  L KL  L    C +L S P +
Sbjct: 645 VCGAPNLQELSFEYC----ENLIKIHVSVGFLDKLKILDADGCSKLTSFPPM 692



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 5/132 (3%)

Query: 490 SLKELYLGGCSNLKRFPEI--SCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
           +++ L    C  +   P++  + N+++L  +    + ++  S+G L +L  LD   CS L
Sbjct: 627 NMRVLNFNQCHYITEIPDVCGAPNLQELSFEYCENLIKIHVSVGFLDKLKILDADGCSKL 686

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
            S       L SL  L LS C  LE  PE +G +E++  L++ +   +++PSS++ LS+L
Sbjct: 687 TSFPPM--KLTSLEELKLSFCANLECFPEILGKMENVTSLDIKDTPIKELPSSIQHLSRL 744

Query: 607 SDLRLQNCKRLQ 618
             ++L+N   +Q
Sbjct: 745 QRIKLKNGGVIQ 756



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 37/203 (18%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAI-------------- 522
           TS P  + L SL+EL L  C+NL+ FPEI   +E+   LD+K+T I              
Sbjct: 687 TSFPP-MKLTSLEELKLSFCANLECFPEILGKMENVTSLDIKDTPIKELPSSIQHLSRLQ 745

Query: 523 ---------EELPSSIGNLSRLVDLDLTNCSGL--------KSVSSRLCNLKSLRRLNLS 565
                     +LPS+   +  L  L +  C GL        K   S +    ++  L+LS
Sbjct: 746 RIKLKNGGVIQLPSTFFAMKELRYLLVNQCEGLLLPVENEGKEQMSSMVVENTIGYLDLS 805

Query: 566 GCLKLEK-LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            C   +K L   +    +++ L L   DF  +P+ +++   L++L L+ C+ L  +  +P
Sbjct: 806 HCHISDKFLQSGLPLFSNVKELYLNGNDFTILPACIQEFQFLTELYLEACENLHEIGWIP 865

Query: 625 CGSSIH-ARHCTSLKTLSNSSTL 646
               +  AR C+SL +   S  L
Sbjct: 866 PNLEVFSARECSSLTSECRSMLL 888


>gi|297805930|ref|XP_002870849.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316685|gb|EFH47108.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1225

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 240/729 (32%), Positives = 348/729 (47%), Gaps = 144/729 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F++H+      + I  FID+ + R   I P L  AI GSKI+IV
Sbjct: 239 KHDVFPSFHGADVRKTFLAHILKEFKGKGIVPFIDNDIERSKSIGPELVEAIRGSKIAIV 298

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------YCPSL 122
           + S  YASS WCLNELV+I++ + + GQ V+ +FY VDP+D               C   
Sbjct: 299 LLSRNYASSSWCLNELVEIMKCREELGQTVMTIFYDVDPTDVKKQTGDFGKVFKKTCKGK 358

Query: 123 G------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W  + +   +           E+ + E    D+S  L+   PS + D  +G+ 
Sbjct: 359 TKEDIKRWQNVLEAVATIAGEHSCNWDNEAAMTEKIATDVSNMLNRYSPSRDFDGFIGMG 418

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + + E+ES L   S E   +GIWG  GIGKTTIA  +YS  S +FE S FM+NI+     
Sbjct: 419 AHMNEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELMYT 478

Query: 221 -----DE-SEKV----GGLANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                DE S K+      L+ I         HL   + RL+  +VLIV   +    Q+D 
Sbjct: 479 RPVCSDEYSAKIQLQQQFLSQIINHKDMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDA 538

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           +      F  GSR+IITT+D +LLK H    + H+++V+  S  ++  +F   AFGQN P
Sbjct: 539 IAKETRWFGHGSRIIITTQDQRLLKAH---GINHIYKVEFPSAYEAYQIFCMYAFGQNFP 595

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF EL+  V K    +PL L+V+GS+ +GMS  EW +A+ +LK      IQ +LK SY
Sbjct: 596 KDGFEELAWQVTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSILKFSY 655

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-----NN 436
           D L DE++++FL  AC F   +   V ++L +     + G+  L  KSL+ +        
Sbjct: 656 DALCDEDKDLFLHIACLFNDEEMVRVEDYLASSFLDVRQGLHLLAEKSLIALKILSADYT 715

Query: 437 KITMHDLLQEMGGEIVR----QESIKDPGKRSRLWHPEDIYQVLNENTS----------- 481
           +I MH+LL ++G +IVR     + I++PGKR  L    DI +VL +NT            
Sbjct: 716 RIKMHNLLVQLGRDIVRHKPGHQCIREPGKRQFLVDARDIREVLTDNTDSRNVIGILLEV 775

Query: 482 -------------------------------------LPTGI-NLDSLKELYLGGCSNLK 503
                                                LP G+ NL     +    C  +K
Sbjct: 776 RNLSGELNINERAFEGLSNLKFLRFRGLYDGENNKLYLPQGLNNLPQKLRILEWSCFQMK 835

Query: 504 RFPEISCN--IEDLDLKETAIEEL---PSSIGNLSRLV--------------------DL 538
             P   C   +  +D+  + ++ L      +GNL R+                      L
Sbjct: 836 CLPSNFCTKYLVHIDMWNSKLQNLWQGNQPLGNLKRMYLAESKHLKELPNLSTATNLEKL 895

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDFE 594
            L  CS L  + S L NL+ L+ L+L GCL LE LP  I NLESL+YL+L +    K F 
Sbjct: 896 TLFGCSSLAELPSSLGNLQKLQALSLRGCLNLEALPTNI-NLESLDYLDLTDCLLIKSFP 954

Query: 595 KIPSSMKQL 603
           +I +++K+L
Sbjct: 955 EISTNIKRL 963



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 28/164 (17%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LPT INL+SL  L L  C  +K FPEIS NI+ L L +TA++E+PS+I + S L     
Sbjct: 929  ALPTNINLESLDYLDLTDCLLIKSFPEISTNIKRLYLMKTAVKEVPSTIKSWSHL----- 983

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
                               R+L +S    L++ P     +  L Y N  +   ++IP  +
Sbjct: 984  -------------------RKLEMSYNDNLKEFPHAFDIITKL-YFN--DVKIQEIPLWV 1021

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
            K++S+L  L L+ CKRL +LP+L    S I+  +C SL+ L  S
Sbjct: 1022 KKISRLQTLVLEGCKRLVTLPQLSDSLSQIYVENCESLERLDFS 1065


>gi|255563202|ref|XP_002522604.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223538080|gb|EEF39691.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1158

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 222/557 (39%), Positives = 307/557 (55%), Gaps = 85/557 (15%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           ES L++  V+D+ K++  + PS + D LVGV+  I+ I+S LL G ++   +GIWG+GGI
Sbjct: 203 ESELVDKIVSDVWKRVKQVSPSIS-DCLVGVDLQIERIKSLLLVGLSDVRVLGIWGMGGI 261

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLAN--------------IHLNFERR 239
           GKTT+A A++  I+  FEG  F+ NI  ES+K GGL                + LN    
Sbjct: 262 GKTTLAGAVFKQIAFQFEGCCFLSNIGKESQKCGGLTRLGEELLSKVLKEREVKLNTPDI 321

Query: 240 RLSRMK-------VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
           R S  K       VLIV  D+ +++Q++   G    F  GSR+ +T+RD QLL     + 
Sbjct: 322 RSSHFKEMLRHNRVLIVLDDVNNIEQLEYFAGDPCWFGSGSRIFVTSRDKQLL----STT 377

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           V   +EVKEL+Y D+L L   NAF Q  P   F+ L+++V++YA G PLAL+VLGS L G
Sbjct: 378 VDVTYEVKELNYEDALHLVCWNAFKQKSPLEDFVALTHLVVRYARGNPLALKVLGSMLYG 437

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            S+ EW SA+ KL R PH DIQ +LK +YD LDDEE +IFL  AC F+  D+  V   LD
Sbjct: 438 KSKTEWGSALKKLTRAPHKDIQDILKFTYDNLDDEELDIFLHIACLFESEDRDRVTQALD 497

Query: 413 ACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI 472
            C FSA IGIS LV KSL+TIS NK+ MHDLLQEMG EIVRQES K P +RSRLW+P+DI
Sbjct: 498 GCGFSADIGISTLVDKSLLTISKNKLKMHDLLQEMGREIVRQES-KRPSERSRLWNPDDI 556

Query: 473 YQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL 532
           Y+VL ENT     + +       L G S  ++          L+L   A     + I NL
Sbjct: 557 YKVLEENTGTEAIVGI-------LLGMSEARK----------LELNRNAF----TRISNL 595

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL----ESLEYL-- 586
             L+     NC G +      C ++            LE LP+++  L      L++L  
Sbjct: 596 KFLILRMSNNCGGFEEE----CKVQFPE--------GLESLPQQLRYLYWHGYPLKFLPA 643

Query: 587 -----NLAEKDF-----------EKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGS 627
                NL E +F           +K+PSS+ QL+KL+ + L+  K ++S P   +L    
Sbjct: 644 NFHPTNLIELNFPYSRLEGLWEGDKVPSSIGQLTKLTFMSLRCSKNIRSFPTTIDLQSLE 703

Query: 628 SIHARHCTSLKTLSNSS 644
           ++    C++LK     S
Sbjct: 704 TLDLSGCSNLKIFPEVS 720



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/115 (60%), Positives = 89/115 (77%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASS S+   I + K+DVFLSFRG+D R+NF+SHL+AAL R+ I TFIDD+L RG+EI+ 
Sbjct: 1   MASSFSASARIQNWKYDVFLSFRGEDTRNNFISHLHAALSRKSIRTFIDDELRRGDEITR 60

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
           SL   IE SKI++VIFS  YASS +CL+EL KI+E    YGQ V+P+F+ V+PSD
Sbjct: 61  SLLKKIEESKIAVVIFSRNYASSTYCLDELEKIIEFHECYGQTVIPIFFNVNPSD 115



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 125/256 (48%), Gaps = 74/256 (28%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           S PT I+L SL+ L L GCSNLK FPE+S NI  L L ETAI+E+P SI +LS+LV L++
Sbjct: 692 SFPTTIDLQSLETLDLSGCSNLKIFPEVSRNIRYLYLNETAIQEVPLSIEHLSKLVVLNM 751

Query: 541 TNCSGLKSVSSRL----------------------------------------------- 553
            NC+ L+ + S +                                               
Sbjct: 752 KNCNELECIPSTIFKLKSLGVLILSGCKKLESFPEILETTNHLQHLSLDETAMVNLPDTF 811

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESL-----------------EYL------NLAE 590
           CNLK+L  LN S C KL KLP+ + NL+SL                 +YL      NL+ 
Sbjct: 812 CNLKALNMLNFSDCSKLGKLPKNMKNLKSLAELRAGGCNLSTLPADLKYLSSIVELNLSG 871

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL-- 647
            +F+ +P+ + QLSKL  + +  CKRLQSLPELP     ++AR C SL ++S    L   
Sbjct: 872 SNFDTMPAGINQLSKLRWINVTGCKRLQSLPELPPRIRYLNARDCRSLVSISGLKQLFEL 931

Query: 648 -TRSSKHWDIFNFSNC 662
              +S   + F F+NC
Sbjct: 932 GCSNSLDDETFVFTNC 947


>gi|225460149|ref|XP_002276056.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1131

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 263/724 (36%), Positives = 370/724 (51%), Gaps = 124/724 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VF+SFRG+D R NF  HL   L    I TF DD+ L +G +I+  L  AIE SKI I+
Sbjct: 19  YEVFISFRGEDTRKNFTDHLYTTLVAYGIHTFRDDEELEKGGDIASDLLRAIEESKIFII 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           IFS  YA+SRWCLNELVKI E   +    ++P+FY V+PSD       Y  +        
Sbjct: 79  IFSTNYANSRWCLNELVKIFECTTQKQSTILPIFYHVNPSDVRKQSGSYGDAFVDHEKDA 138

Query: 123 ---------GWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W    +   S          E+++++   +DI ++L+   P +    +VG
Sbjct: 139 DEKKMEVIQKWRTALNQVASLCGLHVDEQYETLVVKEITDDIIRRLNRK-PLNVGKNIVG 197

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++  +++++S +     E   VGI+GIGGIGKTTIA AIY++IS  F+GS F+ N+R+ S
Sbjct: 198 MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAIYNDISYQFDGSSFLNNVRERS 257

Query: 224 E-----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           +                 K   ++N+   +   +R LS  +VL+VF D+ DL QI+ L  
Sbjct: 258 KDNALQLQQELLHGILKGKSPKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLAE 317

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
               F P SR+IITTR    L  +    V   +EV  L   +++ LFS  AF QN P   
Sbjct: 318 EHSWFGPRSRIIITTRHKHFLTQYG---VKESYEVPILHDAEAIELFSWWAFKQNLPNEI 374

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +  LS  V+ YA G+PLAL+VLGS+L   +  EWESA+ KLK +PHM IQ VLK+SYDGL
Sbjct: 375 YKNLSYQVVDYAKGLPLALEVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGL 434

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD E+ IFLD ACFFKG D+  V   LD   F A+ GI  L  K L++IS NK+ MHDLL
Sbjct: 435 DDVEKGIFLDIACFFKGKDKDFVSRMLDE-DFYAESGIGVLHDKCLISISGNKLDMHDLL 493

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD------------- 489
           Q+MG EIVRQE  K+PG+RSRLW  EDI+ VL  N  +    GI LD             
Sbjct: 494 QQMGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTE 553

Query: 490 ---SLKELYLGGCSNLK------------------------RFPEISCNIEDLDLKETAI 522
               +K+L L    N K                         F   S ++  L     ++
Sbjct: 554 AFAGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSL 613

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS----------------- 565
           + LP        LVDL +   S +K +   +  LKSL+ ++LS                 
Sbjct: 614 KSLPKDFSP-KHLVDLSMPY-SHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNL 671

Query: 566 ------GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
                 GC+ L ++   +G+L+ L +L+L + K   ++PS +     L  L L  C + +
Sbjct: 672 ERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFE 731

Query: 619 SLPE 622
             PE
Sbjct: 732 EFPE 735



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 20/162 (12%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKE--TAIEELPSSIGNLSRLVD 537
           LP+ I N  SL+ L L GCS  + FPE   N+E L +L E  T +  LP S  ++  L  
Sbjct: 709 LPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKK 768

Query: 538 LDLTNCSGL-------KSVSSRLC-------NLKSLRRLNLSGC-LKLEKLPEEIGNLES 582
           L    C          K  S+ +C       NL  L++L+LS C +        +G L S
Sbjct: 769 LSFRGCGPASASWLWSKRSSNSICFTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSS 828

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           LE LNL+  +F  +P+ M  LS L  L L+NCKRLQ+LP+ P
Sbjct: 829 LEDLNLSGNNFVTLPN-MSGLSHLVFLGLENCKRLQALPQFP 869



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L SLK + L     L   P+ S   N+E L L+    + E+  S+G+L +L  L L +C 
Sbjct: 645 LKSLKSMDLSHSKCLIETPDFSGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCK 704

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ + SR+ N KSLR L LSGC K E+ PE  GNLE L+ L+        +P S   + 
Sbjct: 705 MLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMR 764

Query: 605 KLSDLRLQNC 614
            L  L  + C
Sbjct: 765 NLKKLSFRGC 774



 Score = 39.3 bits (90), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 11/121 (9%)

Query: 470 EDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
           ED+    N   +LP    L  L  L L  C  L+  P+   ++EDL L+      LP+  
Sbjct: 830 EDLNLSGNNFVTLPNMSGLSHLVFLGLENCKRLQALPQFPSSLEDLILRGNNFVTLPNMS 889

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           G LS L  L L NC  L+++        S+R LN + C  L       G  ESL+ L   
Sbjct: 890 G-LSHLKTLVLGNCKRLEALPQL---PSSIRSLNATDCTSL-------GTTESLKLLRPW 938

Query: 590 E 590
           E
Sbjct: 939 E 939


>gi|297791369|ref|XP_002863569.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309404|gb|EFH39828.1| hypothetical protein ARALYDRAFT_917150 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1177

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 247/740 (33%), Positives = 366/740 (49%), Gaps = 121/740 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VFLSFRG+DVR  F+SH+     R  I  FID+++ RG  I P L  AI GSKI+I++
Sbjct: 40  HPVFLSFRGEDVRKGFLSHIQKEFQRMGITPFIDNEMKRGGSIGPELLQAIRGSKIAIIL 99

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------GYC 119
            S  Y SS+WCL+ELV+I++ + + GQ V+ VFY VDPSD                 G  
Sbjct: 100 LSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFRKTCVGRP 159

Query: 120 PSLGWMGIFDIPTSESVLIEGNVN---------DISKKLSDLF---PSDNKDQLVGVESI 167
             +       + ++ ++L E + N          I+K +SD+    PS + D+ VG+E+ 
Sbjct: 160 EEVKQKWKQALTSAANILGEDSRNWENEADMIIKIAKDVSDVLSFTPSKDFDEFVGIEAH 219

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR------- 220
             EI S L     E   +GIWG  GIGKTTI+  +Y+ +   F+    + NI+       
Sbjct: 220 TTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPC 279

Query: 221 -DE--------SEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
            DE         E +  + N       HL   + RL   KVL+V  D+  L Q+D +   
Sbjct: 280 HDEYSAKLQLQKELLSQMINQKDMVVPHLGVAQERLKDRKVLLVLDDVDALVQLDAMAKD 339

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
           +  F  GSR+I+ T+D++LLK H    + ++++V   + +++L +F   AFGQ  P  GF
Sbjct: 340 VRWFGLGSRIIVVTQDLKLLKAHG---IKYIYKVDFPTSDEALEIFCMYAFGQKSPKVGF 396

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            +++  V   A  +PL L+V+GSYL+ MS++EW  ++ +L+     DI+ VLK SY+ L 
Sbjct: 397 EQIARTVTTLAGKLPLGLRVMGSYLRRMSKQEWARSIPRLRTSLDDDIESVLKFSYNSLA 456

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           +EE+++FL  ACFF+      +  FL       K G+  L  KSL++++   I MH+LL 
Sbjct: 457 EEEKDLFLHIACFFRRERIETLEVFLANKFGDVKQGLQILADKSLLSLNFGNIEMHNLLV 516

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNL-KR 504
           ++G +I+R++SI  PGKR  L   EDI +VL E+T   T + +D      + G  N+ +R
Sbjct: 517 QLGLDIIRKQSIHKPGKRQFLVDAEDICEVLTEDTGTRTLVGIDLELSGVIEGVINISER 576

Query: 505 FPEISCNIEDLDLKETA------IEELPSSIGNLSRLVDL-------------------- 538
             E  CN++ L            I  LP  + N+SR + L                    
Sbjct: 577 AFERMCNLQFLRFHHPYGDRCHDILYLPQGLSNISRKLRLLHWERYPLTCLPSKFNPEFL 636

Query: 539 --------------------------DLTNCSGLKSVS--SRLCNLKSLRRLNLSGCLKL 570
                                     DL+ C  LK +   S   NL+ LR   L  CL L
Sbjct: 637 VKINMRDSMLEKLWEGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELR---LVDCLSL 693

Query: 571 EKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
            +LP  IGN+ +L  L+L       K+PSS+  L+ L  L L  C  L  LP     SSI
Sbjct: 694 VELPSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKKLYLNRCSSLVQLP-----SSI 748

Query: 630 HARHCTSLK--TLSNSSTLL 647
              + TSLK   LS  S+LL
Sbjct: 749 G--NVTSLKELNLSGCSSLL 766



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 5/145 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKE-TAIEELPSSIGNLSRLVD 537
           LP      +L+EL L  C +L   P    N+    +LDL   +++ +LPSSIGNL+ L  
Sbjct: 673 LPDFSTATNLQELRLVDCLSLVELPSSIGNVTNLLELDLIGCSSLVKLPSSIGNLTNLKK 732

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKI 596
           L L  CS L  + S + N+ SL+ LNLSGC  L ++P  IGN  +L+ L         ++
Sbjct: 733 LYLNRCSSLVQLPSSIGNVTSLKELNLSGCSSLLEIPSSIGNTTNLKKLYADGCSSLVEL 792

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP 621
           PSS+  ++ L +L+L NC  L   P
Sbjct: 793 PSSVGNIANLRELQLMNCSSLIEFP 817



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 94/186 (50%), Gaps = 19/186 (10%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKETA-IEELPSSIGNLSRLVD 537
            LP+  N+ +L+ L+L GCS+L   P   E + N++ L L   + + ELPSSI N++ L  
Sbjct: 840  LPSIGNVINLQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSDLLELPSSIWNITNLQS 899

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            L L  CS LK + S + N  +L+ L+L  C  + +LP  I N  +L YL++         
Sbjct: 900  LYLNGCSSLKELPSLVGNAINLQSLSLMNCSSMVELPSSIWNATNLSYLDV--------- 950

Query: 598  SSMKQLSKLS-DLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDI 656
            SS   L  L+  L L  C++L S P +P    + A  C SL    + S    +      +
Sbjct: 951  SSCSSLVGLNIKLELNQCRKLVSHPVVPDSLILDAGDCESLVERLDCSFQNPKI-----V 1005

Query: 657  FNFSNC 662
             NF+NC
Sbjct: 1006 LNFANC 1011



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 31/170 (18%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD----LKETAIEELPSSIGNLSRLV 536
           +P+ I N  +LK+LY  GCS+L   P    NI +L     +  +++ E PSSI  L+RL 
Sbjct: 768 IPSSIGNTTNLKKLYADGCSSLVELPSSVGNIANLRELQLMNCSSLIEFPSSILKLTRLK 827

Query: 537 DLDLTNCSGLKSVSS--RLCNLKSL---------------------RRLNLSGCLKLEKL 573
           DL+L+ CS L  + S   + NL++L                     + L L+GC  L +L
Sbjct: 828 DLNLSGCSSLVKLPSIGNVINLQTLFLSGCSSLVELPFSIENATNLQTLYLNGCSDLLEL 887

Query: 574 PEEIGNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           P  I N+ +L+  YLN      +++PS +     L  L L NC  +  LP
Sbjct: 888 PSSIWNITNLQSLYLN-GCSSLKELPSLVGNAINLQSLSLMNCSSMVELP 936


>gi|147821054|emb|CAN77694.1| hypothetical protein VITISV_029044 [Vitis vinifera]
          Length = 1530

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 249/703 (35%), Positives = 375/703 (53%), Gaps = 109/703 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF+G+D R NF  HL  AL    I+TF D ++L +G +I+  LS AIE S+I I+
Sbjct: 20  YDVFLSFKGEDTRRNFTDHLYTALVACGIQTFRDNEELEKGGDIASDLSRAIEESRIFII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           IFS+ YA S WCLNELVKI+E   +   +V+P+FY VDPSD       +  +L       
Sbjct: 80  IFSKNYAYSTWCLNELVKIVECMKQKDIMVLPIFYHVDPSDVRRQRGNFGDALAHHEGDA 139

Query: 124 ------WMGIFDIPTSESVLIEG----------NVNDISKKLS---DLFPSDNKDQLVGV 164
                  +  + I  +++  + G           VN+I  K+    +  P +    +VG+
Sbjct: 140 DQQKKQMVQKWRIALTKAADLSGCHVDDQYETEAVNEIINKIVGSLNCQPLNVGKNIVGI 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
              ++ ++S + +   + N +GI G GGIGKTTIA AIY+ IS  ++GS F++N+R+ S+
Sbjct: 200 SVHLENLKSMMNTELNKVNVIGICGTGGIGKTTIAKAIYNEISYQYDGSSFLRNMRERSK 259

Query: 225 -----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
                            K   ++N+   +N  +R L+  +VL++FYD+ DL Q++ L   
Sbjct: 260 GDILQLQKELLHGILKGKGFRISNVDEGVNMIKRCLNSKRVLVIFYDVDDLTQLEYLAEE 319

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F   S +IIT+RD Q+L  H G  +   +EV + +  +++ LFS  AF QN P   +
Sbjct: 320 KDWFDVKSTIIITSRDKQVLA-HYGVHIS--YEVSKFNNKEAIELFSLWAFKQNLPKEAY 376

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             LS  +I+YA+G+PLAL++LG+ L G    EWESA+ KLKR+PHM+I KVL++S+DGLD
Sbjct: 377 KNLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLD 436

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D ++ IFLD ACFFK  D+Y V   L      A+ GI+ L  K L+TIS N I MHDL+Q
Sbjct: 437 DMDKKIFLDVACFFKEKDKYFVSRILGP---HAEYGIATLNDKCLITISKNMIDMHDLIQ 493

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLK----------- 492
           +MG EI+RQE  +D G+RSR+W   D Y VL  N  T    G+ LD  K           
Sbjct: 494 QMGREIIRQECPEDLGRRSRVWD-SDAYHVLTRNMGTRAIEGLFLDICKFDPIQFAKESF 552

Query: 493 -----------------------------ELYLGGCSNLKRFPEISCNIEDLDLKETAIE 523
                                        +L+   C  L R  E S  +  L     ++E
Sbjct: 553 KQMDRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDC--LPRDFEFSSKLTYLHWDGYSLE 610

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSV--SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
            LP++  +   LV+L L   S +K +   ++L N   L+ +NL+  + L ++P +  ++ 
Sbjct: 611 SLPTNF-HAKDLVELILRG-SNIKQLWRGNKLHN--ELKVINLNYSVHLTEIP-DFSSVP 665

Query: 582 SLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +LE L L      E +P  + +   L  L  + C +L+  PE+
Sbjct: 666 NLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEI 708



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 103/222 (46%), Gaps = 52/222 (23%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I    SL  L   GCS L+ FPEI  ++   + LDL  TAI+E+PSSI  L  L 
Sbjct: 1135 SLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQ 1194

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD---- 592
             L+L  C  L ++   +CNL SLR L +  C KL KLPE +G L+SLEYL + + D    
Sbjct: 1195 YLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNC 1254

Query: 593  -------------------------------------------FEKIPSSMKQLSKLSDL 609
                                                       F  IP  + QL  L   
Sbjct: 1255 QLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVF 1314

Query: 610  RLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
             L +C+ LQ +PELP     + A  C+SL+ LS+ STLL  S
Sbjct: 1315 DLSHCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTLLWSS 1356



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSI-GNLSRLV 536
           LP GI     L+ L   GCS LKRFPEI  N   + +LDL  TAI+ LPSS+  +L  L 
Sbjct: 681 LPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALE 740

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEK 595
            L     S L  +   +C L SL  L+LS C  +E  +P +I +L SL+ LNL   DF  
Sbjct: 741 ILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRS 800

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           IP+++ QLS+L  L L +C+ LQ +PELP
Sbjct: 801 IPATINQLSRLQVLNLSHCQNLQHIPELP 829



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 13/129 (10%)

Query: 512  IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
             +D D+KE  I E PS +  L       L +C  LKS+ S +C  KSL  L+ SGC +LE
Sbjct: 1105 FKDSDMKELPIIENPSELDGLC------LRDCKTLKSLPSSICEFKSLTTLSCSGCSQLE 1158

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
              PE + ++   + L+L     ++IPSS+++L  L  L L  C+ L +LPE  C      
Sbjct: 1159 SFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESIC------ 1212

Query: 632  RHCTSLKTL 640
             + TSL+TL
Sbjct: 1213 -NLTSLRTL 1220



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 23/242 (9%)

Query: 410 FLDACRFS----AKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSR 465
           FLD C+F     AK    ++    L+ I  +K   +DL+   G     +   +D   R  
Sbjct: 536 FLDICKFDPIQFAKESFKQMDRLRLLKI--HKGDEYDLISVFGSHPYEKLFYEDCLPRDF 593

Query: 466 LWHPEDIYQVLNENT--SLPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLKET 520
            +  +  Y   +  +  SLPT  +   L EL L G SN+K   R  ++   ++ ++L  +
Sbjct: 594 EFSSKLTYLHWDGYSLESLPTNFHAKDLVELILRG-SNIKQLWRGNKLHNELKVINLNYS 652

Query: 521 A-IEELP--SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
             + E+P  SS+ NL  L    L  C  L+ +   +   K L+ L+  GC KL++ PE  
Sbjct: 653 VHLTEIPDFSSVPNLEILT---LEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIK 709

Query: 578 GNLESLEYLNLAEKDFEKIPSSM-KQLSKLSDLRLQNCKRLQSLP-ELPCGSSIHA---R 632
           GN+  L  L+L+    + +PSS+ + L  L  L  +   +L  +P ++ C SS+      
Sbjct: 710 GNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLS 769

Query: 633 HC 634
           HC
Sbjct: 770 HC 771


>gi|147865361|emb|CAN84090.1| hypothetical protein VITISV_003077 [Vitis vinifera]
          Length = 1002

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 262/724 (36%), Positives = 369/724 (50%), Gaps = 124/724 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VF+SFRG+D R NF  HL   L    I TF DD+ L +G +I+  L  AIE SKI I+
Sbjct: 21  YEVFISFRGEDTRKNFTDHLYTTLVAXGIXTFRDDEELEKGGDIASDLLRAIEESKIFII 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           IFS  YA+SRWCLNELVKI E   +    ++P+FY V+PSD       Y  +        
Sbjct: 81  IFSTNYANSRWCLNELVKIFECTTQKQSTILPIFYHVNPSDVRKQSGSYGDAFVDHEKDA 140

Query: 123 ---------GWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W    +   S          E+++++   +DI ++L+   P +    +VG
Sbjct: 141 DEKKMEVIQKWRTALNQVASLCGLHVDEQYETLVVKEITDDIIRRLNRK-PLNVGKNIVG 199

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++  +++++S +     E   VGI+GIGGIGKTTIA A+Y++IS  F+GS F+ N+R+ S
Sbjct: 200 MDFHLEKLKSLMNIELNEVRVVGIYGIGGIGKTTIAKAVYNDISYQFDGSSFLNNVRERS 259

Query: 224 E-----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           +                 K   ++N+   +   +R LS  +VL+VF D+ DL QI+ L  
Sbjct: 260 KDNALQLQQELLHGILKGKSXKVSNMDEGIQMIKRSLSSKRVLVVFDDVDDLMQIENLAE 319

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
               F P SR+IITTR    L  +    V   +EV  L   +++ LFS  AF QN P   
Sbjct: 320 EHSWFGPRSRIIITTRHKHFLTQYG---VKESYEVXXLHDAEAIELFSWWAFKQNLPNEI 376

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           +  LS  V+ YA G+PLAL VLGS+L   +  EWESA+ KLK +PHM IQ VLK+SYDGL
Sbjct: 377 YKNLSYQVVDYAKGLPLALXVLGSFLFKKTISEWESALCKLKTIPHMGIQNVLKISYDGL 436

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DD E+ IFLD ACFFKG D+  V   LD   F A+ GI  L  K L++IS NK+ MHDLL
Sbjct: 437 DDVEKGIFLDIACFFKGKDKDFVSRMLDE-DFYAESGIGVLHDKCLISISGNKLDMHDLL 495

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD------------- 489
           Q+MG EIVRQE  K+PG+RSRLW  EDI+ VL  N  +    GI LD             
Sbjct: 496 QQMGWEIVRQECPKEPGRRSRLWEQEDIFDVLKRNMGSEKIEGIFLDLSHLEDILDFTTE 555

Query: 490 ---SLKELYLGGCSNLK------------------------RFPEISCNIEDLDLKETAI 522
               +K+L L    N K                         F   S ++  L     ++
Sbjct: 556 AFAGMKKLRLLKVYNSKSILGDFGDTFTFNNKVNCRVRFAHEFKFCSDDLRYLYWHGYSL 615

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS----------------- 565
           + LP        LVDL +   S +K +   +  LKSL+ ++LS                 
Sbjct: 616 KSLPKDFSP-KHLVDLSMPY-SHIKKLWKGIKVLKSLKSMDLSHSKCLIETPDFSGITNL 673

Query: 566 ------GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
                 GC+ L ++   +G+L+ L +L+L + K   ++PS +     L  L L  C + +
Sbjct: 674 ERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCKMLRRLPSRIWNFKSLRTLILSGCSKFE 733

Query: 619 SLPE 622
             PE
Sbjct: 734 EFPE 737



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L SLK + L     L   P+ S   N+E L L+    + E+  S+G+L +L  L L +C 
Sbjct: 647 LKSLKSMDLSHSKCLIETPDFSGITNLERLVLEGCINLPEVHPSLGDLKKLNFLSLKDCK 706

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ + SR+ N KSLR L LSGC K E+ PE  GNLE L+ L+        +P S   + 
Sbjct: 707 MLRRLPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMR 766

Query: 605 KLSDLRLQNC 614
            L  L  + C
Sbjct: 767 NLKKLSFRGC 776



 Score = 46.2 bits (108), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 20/144 (13%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKE--TAIEELPSSIGNLSRLVD 537
           LP+ I N  SL+ L L GCS  + FPE   N+E L +L E  T +  LP S  ++  L  
Sbjct: 711 LPSRIWNFKSLRTLILSGCSKFEEFPENFGNLEMLKELHEDGTVVRALPPSNFSMRNLKK 770

Query: 538 LDLTNCS-------GLKSVSSRLC-------NLKSLRRLNLSGC-LKLEKLPEEIGNLES 582
           L    C          K  S+ +C       NL  L++L+LS C +        +G L S
Sbjct: 771 LSFRGCGPASASWLWXKRSSNSICFTVPSSSNLCYLKKLDLSDCNISDGANLGSLGFLSS 830

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKL 606
           LE LNL+  +F  +P +M  LS L
Sbjct: 831 LEDLNLSGNNFVTLP-NMSGLSHL 853


>gi|359493229|ref|XP_002264909.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1542

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 249/703 (35%), Positives = 375/703 (53%), Gaps = 109/703 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF+G+D R NF  HL  AL    I+TF D ++L +G +I+  LS AIE S+I I+
Sbjct: 20  YDVFLSFKGEDTRRNFTDHLYTALVACGIQTFRDNEELEKGGDIASDLSRAIEESRIFII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           IFS+ YA S WCLNELVKI+E   +   +V+P+FY VDPSD       +  +L       
Sbjct: 80  IFSKNYAYSTWCLNELVKIVECMKQKDIMVLPIFYHVDPSDVRRQRGNFGDALAHHEGDA 139

Query: 124 ------WMGIFDIPTSESVLIEG----------NVNDISKKLS---DLFPSDNKDQLVGV 164
                  +  + I  +++  + G           VN+I  K+    +  P +    +VG+
Sbjct: 140 DQQKKQMVQKWRIALTKAADLSGCHVDDQYETEAVNEIINKIVGSLNCQPLNVGKNIVGI 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
              ++ ++S + +   + N +GI G GGIGKTTIA AIY+ IS  ++GS F++N+R+ S+
Sbjct: 200 SVHLENLKSMMNTELNKVNVIGICGTGGIGKTTIAKAIYNEISYQYDGSSFLRNMRERSK 259

Query: 225 -----------------KVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
                            K   ++N+   +N  +R L+  +VL++FYD+ DL Q++ L   
Sbjct: 260 GDILQLQKELLHGILKGKGFRISNVDEGVNMIKRCLNSKRVLVIFYDVDDLTQLEYLAEE 319

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F   S +IIT+RD Q+L  H G  +   +EV + +  +++ LFS  AF QN P   +
Sbjct: 320 KDWFDVKSTIIITSRDKQVLA-HYGVHIS--YEVSKFNNKEAIELFSLWAFKQNLPKEAY 376

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             LS  +I+YA+G+PLAL++LG+ L G    EWESA+ KLKR+PHM+I KVL++S+DGLD
Sbjct: 377 KNLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLD 436

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D ++ IFLD ACFFK  D+Y V   L      A+ GI+ L  K L+TIS N I MHDL+Q
Sbjct: 437 DMDKKIFLDVACFFKEKDKYFVSRILGP---HAEYGIATLNDKCLITISKNMIDMHDLIQ 493

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLK----------- 492
           +MG EI+RQE  +D G+RSR+W   D Y VL  N  T    G+ LD  K           
Sbjct: 494 QMGREIIRQECPEDLGRRSRVWD-SDAYHVLTRNMGTRAIEGLFLDICKFDPIQFAKESF 552

Query: 493 -----------------------------ELYLGGCSNLKRFPEISCNIEDLDLKETAIE 523
                                        +L+   C  L R  E S  +  L     ++E
Sbjct: 553 KQMDRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDC--LPRDFEFSSKLTYLHWDGYSLE 610

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSV--SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
            LP++  +   LV+L L   S +K +   ++L N   L+ +NL+  + L ++P +  ++ 
Sbjct: 611 SLPTNF-HAKDLVELILRG-SNIKQLWRGNKLHN--ELKVINLNYSVHLTEIP-DFSSVP 665

Query: 582 SLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +LE L L      E +P  + +   L  L  + C +L+  PE+
Sbjct: 666 NLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEI 708



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 103/222 (46%), Gaps = 52/222 (23%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I    SL  L   GCS L+ FPEI  ++   + LDL  TAI+E+PSSI  L  L 
Sbjct: 1135 SLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQ 1194

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD---- 592
             L+L  C  L ++   +CNL SLR L +  C KL KLPE +G L+SLEYL + + D    
Sbjct: 1195 YLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNC 1254

Query: 593  -------------------------------------------FEKIPSSMKQLSKLSDL 609
                                                       F  IP  + QL  L   
Sbjct: 1255 QLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVF 1314

Query: 610  RLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
             L +C+ LQ +PELP     + A  C+SL+ LS+ STLL  S
Sbjct: 1315 DLSHCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTLLWSS 1356



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSI-GNLSRLV 536
           LP GI     L+ L   GCS LKRFPEI  N   + +LDL  TAI+ LPSS+  +L  L 
Sbjct: 681 LPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALE 740

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEK 595
            L     S L  +   +C L SL  L+LS C  +E  +P +I +L SL+ LNL   DF  
Sbjct: 741 ILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRS 800

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           IP+++ QLS+L  L L +C+ LQ +PELP
Sbjct: 801 IPATINQLSRLQVLNLSHCQNLQHIPELP 829



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 13/129 (10%)

Query: 512  IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
             +D D+KE  I E PS +  L       L +C  LKS+ S +C  KSL  L+ SGC +LE
Sbjct: 1105 FKDSDMKELPIIENPSELDGLC------LRDCKTLKSLPSSICEFKSLTTLSCSGCSQLE 1158

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
              PE + ++   + L+L     ++IPSS+++L  L  L L  C+ L +LPE  C      
Sbjct: 1159 SFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESIC------ 1212

Query: 632  RHCTSLKTL 640
             + TSL+TL
Sbjct: 1213 -NLTSLRTL 1220



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 23/242 (9%)

Query: 410 FLDACRFS----AKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSR 465
           FLD C+F     AK    ++    L+ I  +K   +DL+   G     +   +D   R  
Sbjct: 536 FLDICKFDPIQFAKESFKQMDRLRLLKI--HKGDEYDLISVFGSHPYEKLFYEDCLPRDF 593

Query: 466 LWHPEDIYQVLNENT--SLPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLKET 520
            +  +  Y   +  +  SLPT  +   L EL L G SN+K   R  ++   ++ ++L  +
Sbjct: 594 EFSSKLTYLHWDGYSLESLPTNFHAKDLVELILRG-SNIKQLWRGNKLHNELKVINLNYS 652

Query: 521 A-IEELP--SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
             + E+P  SS+ NL  L    L  C  L+ +   +   K L+ L+  GC KL++ PE  
Sbjct: 653 VHLTEIPDFSSVPNLEILT---LEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIK 709

Query: 578 GNLESLEYLNLAEKDFEKIPSSM-KQLSKLSDLRLQNCKRLQSLP-ELPCGSSIHA---R 632
           GN+  L  L+L+    + +PSS+ + L  L  L  +   +L  +P ++ C SS+      
Sbjct: 710 GNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLS 769

Query: 633 HC 634
           HC
Sbjct: 770 HC 771


>gi|359486106|ref|XP_002274951.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1320

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 260/706 (36%), Positives = 355/706 (50%), Gaps = 111/706 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSF+G+D R  F  HL +AL R  I TF DDKL RG  I+P L  AIE S+ S+++
Sbjct: 23  YDVFLSFKGEDTRLKFTDHLYSALSRRGIRTFRDDKLKRGEAIAPELLQAIEESRSSVIV 82

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-YCPSLG---------WM 125
           FSE YA S WCL+ELVKI+E K   G  V P+FY VDPS  G    S G         W 
Sbjct: 83  FSENYAHSTWCLDELVKIMECKKDLGHTVFPIFYHVDPSHVGQQTGSFGEAFAGYEENWK 142

Query: 126 GIFDIPTSESVLIE-----------GNVNDISKKLSD-LFPS------DNKDQLVGVESI 167
               IP   + L E           G  +D  KK+ D +F        D    LVG++S 
Sbjct: 143 D--KIPRWRTALTEAADLSGWHLLDGYESDQIKKIIDSIFHQLNCKRLDVGANLVGIDSR 200

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG 227
           +KE+  +L   S++   VGI+G+GGIGKTTIA  IY  +S  FE   F++NIR+ S K G
Sbjct: 201 VKEMILRLQMESSDVRIVGIYGVGGIGKTTIAKVIYDKLSCKFECMSFVENIRENSNKQG 260

Query: 228 -------------------GLANIHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
                               + N+ +     R  LS  +V I+  D+   KQ++ L+   
Sbjct: 261 LTHLQNQLLGDILEEERSQNINNVDVGASMIRTALSSKRVFIILDDVDHRKQLEALLRHR 320

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
                GSRVIITTR+  LL       V   +EV+ L+  ++  LFS +AF QN P + F+
Sbjct: 321 GWLGKGSRVIITTRNRHLLIEQ---EVDDSYEVEGLNSEEACELFSLHAFKQNLPKSDFI 377

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
            LS+ ++ Y  G+PLAL+VLGS L  M+  +WES ++KL + P  +I  VLK SY GLD 
Sbjct: 378 NLSHHMVDYCQGLPLALEVLGSLLFNMTIPQWESQLHKLAKEPMAEIHDVLKSSYGGLDR 437

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQ 445
            E++I LD ACFFKG ++  V+  LDAC   A+IGI  L  K L+T+  N+ I MHDL+Q
Sbjct: 438 TEKDILLDVACFFKGEERDFVLRMLDAC---AEIGIQNLKNKCLITLPYNHMIGMHDLIQ 494

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--------ENTSLPTG----INLDSLKE 493
           +M  +IVR+   K+P K SRLW   DI   L         E  SL       ++ DS   
Sbjct: 495 QMCWKIVRENFPKEPNKWSRLWDAHDIECALTTFKGIKKVETISLDLSKLKRVSFDSNVF 554

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKETAIE-------------ELPSSIGNLSRLVDLDL 540
             +     LK    + C  ED++ K   +              E PS   +L +LV+L L
Sbjct: 555 TKMTSLRLLKVHSGVDC-YEDMEEKHYDVVKKNASKMRLGPDFEFPSY--HLRKLVELHL 611

Query: 541 TNCSGLKSVSSRLCNLKSLR-----------------------RLNLSGCLKLEKLPEEI 577
            N S +K +      L+ LR                       RL L GCL L  +   +
Sbjct: 612 -NWSNIKQLWQENKYLEGLRVIDLSYSRELIQMLEFSSMPNLERLILQGCLSLIDIHPSV 670

Query: 578 GNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           GN++ L  L+L   D  + +P S+  L  L  L L +C R +  PE
Sbjct: 671 GNMKKLTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCSRFEKFPE 716



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 89/172 (51%), Gaps = 27/172 (15%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  I +L+SL+ L L  CS  ++FPE   N++ L    L +TAI++LP+SIG+L  L  
Sbjct: 784 LPDSIGDLESLETLDLSDCSKFEKFPEKGGNMKSLKELFLIKTAIKDLPNSIGDLGSLEV 843

Query: 538 LDLT-----------------------NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           LDL+                         S +K +   + +L+SL  L+LS C + EK P
Sbjct: 844 LDLSYYSRFEKFPEKGGNMKSLEVLILKNSAIKDLPDSIGDLESLETLDLSDCSRFEKFP 903

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
           E+ GN++SLE L L     + +P S+  L  L  L L +C + +  PE+  G
Sbjct: 904 EKGGNMKSLENLFLINTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEMKRG 955



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 27/192 (14%)

Query: 458 KDPGKRSRLWHPEDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD 516
           K P K   +   ++++ +      LP  I +L SL+ L L   S  ++FPE   N++ L+
Sbjct: 807 KFPEKGGNMKSLKELFLIKTAIKDLPNSIGDLGSLEVLDLSYYSRFEKFPEKGGNMKSLE 866

Query: 517 ---LKETAIEELPSSIGNLSRLVDLDLTNCS-----------------------GLKSVS 550
              LK +AI++LP SIG+L  L  LDL++CS                        +K + 
Sbjct: 867 VLILKNSAIKDLPDSIGDLESLETLDLSDCSRFEKFPEKGGNMKSLENLFLINTAIKDLP 926

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
             + +L+SL  L+LS C K EK PE    ++ L  LNL     E++ SS+  LS L +L 
Sbjct: 927 DSIGDLESLEILDLSDCSKFEKFPEMKRGMKHLYKLNLRRTTIEELTSSIDNLSGLRNLI 986

Query: 611 LQNCKRLQSLPE 622
           +  CK L+SLP+
Sbjct: 987 IAECKSLRSLPD 998



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 5/144 (3%)

Query: 483 PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE----TAIEELPSSIGNLSRLVDL 538
           P+  N+  L  L L GC NLK  P+   ++E L++ +    +  E+ P   GN+  L +L
Sbjct: 668 PSVGNMKKLTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNMKSLKEL 727

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            L N + +K + + + NL+SL+ L L+ C K +K PE+ GN++SL+ L+L     + +P 
Sbjct: 728 FLRN-TAIKDLPNSIGNLESLKILYLTDCSKFDKFPEKGGNMKSLKELSLINTAIKDLPD 786

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPE 622
           S+  L  L  L L +C + +  PE
Sbjct: 787 SIGDLESLETLDLSDCSKFEKFPE 810



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%)

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           ++  S+GN+ +L  L L  C  LK +   + +L+SL  L+L+ C + EK PE+ GN++SL
Sbjct: 665 DIHPSVGNMKKLTTLSLRGCDNLKDLPDSIGDLESLEILDLTDCSRFEKFPEKGGNMKSL 724

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           + L L     + +P+S+  L  L  L L +C +    PE
Sbjct: 725 KELFLRNTAIKDLPNSIGNLESLKILYLTDCSKFDKFPE 763



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 29/190 (15%)

Query: 458  KDPGKRSRLWHPEDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE--- 513
            K P K   +   E+++ +      LP  I +L+SL+ L L  CS  ++FPE+   ++   
Sbjct: 901  KFPEKGGNMKSLENLFLINTAIKDLPDSIGDLESLEILDLSDCSKFEKFPEMKRGMKHLY 960

Query: 514  DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             L+L+ T IEEL SSI NLS L +L +  C  L+S+   +  LK L  L LSGC  L   
Sbjct: 961  KLNLRRTTIEELTSSIDNLSGLRNLIIAECKSLRSLPDNISRLKFLETLILSGCSDL--- 1017

Query: 574  PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
                               +E + S+  QL  L  L +  CK    + ELP     I A 
Sbjct: 1018 -------------------WEGLISN--QLCNLGKLNISQCKMAGQILELPSSLEEIDAH 1056

Query: 633  HCTSLKTLSN 642
             C S + LS+
Sbjct: 1057 DCRSKEDLSS 1066


>gi|224108373|ref|XP_002333401.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222836441|gb|EEE74848.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1279

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 260/757 (34%), Positives = 376/757 (49%), Gaps = 159/757 (21%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRGKD R+NF SHL   L +  I+ ++DD+ L RG  I P+L    E S+ S++
Sbjct: 22  YDVFLSFRGKDTRNNFTSHLYYNLAQRGIDVYMDDRELERGKTIEPALWKPFEESRFSVI 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------AGY--- 118
           IFS  YASS WCL+ELVKI++   + GQ V+PVFY VDPS+               Y   
Sbjct: 82  IFSRDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEFYDVDPSEVIERKRKYEEA 141

Query: 119 --------------------CPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLF 153
                               C S      GW  + +   SES+ I   V  IS KLS   
Sbjct: 142 FVEHEQNFKENLEKVRNWKDCLSTVANLSGW-DVRNRNESESIKI--IVEYISYKLSITL 198

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           P+ +K+ LVG++S ++ +   +     E   +GI+G+GGIGKTT+A  +Y      FEGS
Sbjct: 199 PTISKN-LVGIDSRLEVLNGYIGEEVGEAIFIGIYGMGGIGKTTVARVVYDRFRLQFEGS 257

Query: 214 YFMQNIRDE-SEKVGG-------LANIHLN----FERRRLSRMKVLIVFY--------DL 253
            F+ N+R+  +EK G        L+ I +     ++  R   M    +          D+
Sbjct: 258 CFLANVREVFAEKDGPCRLQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDV 317

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            D +Q++ L      F PGSR+IIT+RD Q+L  +    V  ++E ++L+ +D+L LFS+
Sbjct: 318 DDKEQLEFLAEERGWFGPGSRIIITSRDKQVLTRNG---VARIYEGEKLNDDDALMLFSQ 374

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF  + PA  FL+LS  V+ YA+G+PLAL+V+GS+L G S  EW  A+N++  +P  +I
Sbjct: 375 KAFKNDQPAEDFLDLSKQVVGYASGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDREI 434

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            KVL VS+DGL + E+ IFLD ACF KG     +   LD   F A IGI  L+ +SL+++
Sbjct: 435 IKVLLVSFDGLHELEKKIFLDIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISV 494

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----------LP 483
           S +++ MH+LLQ+MG EI+R+ES ++PG+RSRLW  +D+   L +NT           +P
Sbjct: 495 SRDQVWMHNLLQKMGKEIIRRESPEEPGRRSRLWTYKDVCLALMDNTGKEKVEAIFLDMP 554

Query: 484 TGIN--------LDSLKELYLGGCSNLKRF--PE-ISCNIEDLDLKETAIEELPSSIG-- 530
            GI            +  L L    N++ F  PE +S N+  L+      + LP+ +   
Sbjct: 555 -GIKEARWNMKAFSKMSRLRLLKIDNVQLFEGPEDLSNNLRFLEWHSYPSKSLPAGLQVD 613

Query: 531 ----------------------------------NLSRLVDLD---------LTNCSGLK 547
                                             NLS+  DL          L  C+ L 
Sbjct: 614 ELVELHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLTGIPNLKSLILEGCTSLS 673

Query: 548 SVSSRLCNLKSLRRLN-----------------------LSGCLKLEKLPEEIGNLESLE 584
            V   L + K L+ +N                       L GC KLEK P+  GN+  L 
Sbjct: 674 EVHPSLAHHKKLQHVNLVNCKSIRILPNNLEMESLEVCTLDGCSKLEKFPDIAGNMNCLM 733

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L L E    K+ SS+  L  L  L + NCK L+S+P
Sbjct: 734 VLRLDETGITKLSSSIHYLIGLGLLSMNNCKNLKSIP 770



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 90/145 (62%), Gaps = 3/145 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SL+   L GCS L++FP+I+ N+     L L ET I +L SSI  L  L  L
Sbjct: 699 LPNNLEMESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLL 758

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + NC  LKS+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE  +++     ++P+
Sbjct: 759 SMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPA 818

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL 623
           S+  L KL  L L  CKR+  LP L
Sbjct: 819 SVFLLKKLKVLSLDGCKRIVVLPSL 843



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 108/192 (56%), Gaps = 17/192 (8%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L GCS LK  PE    +E L   D+  T+I +LP+S+  L +L 
Sbjct: 768 SIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPASVFLLKKLK 827

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            L L  C  +  + S L  L SL  L L  C L+   LPE+IG L SL  L+L++ +F  
Sbjct: 828 VLSLDGCKRIVVLPS-LSGLCSLEVLGLRSCNLREGALPEDIGWLSSLRSLDLSQNNFVS 886

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKH- 653
           +P S+ +LS+L  L L++C  L+SLPE+P    +++   C SLKT+ +   L   SSK  
Sbjct: 887 LPKSINRLSELEMLVLEDCTMLESLPEVPSKVQTVYLNGCISLKTIPDPIKL--SSSKRS 944

Query: 654 -------WDIFN 658
                  W+++N
Sbjct: 945 EFICLNCWELYN 956



 Score = 38.9 bits (89), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 58   ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
            I   L  AIE S +SI+IFS   AS  WC  ELVKI+   ++     V PV Y V  S
Sbjct: 1174 IRSRLFEAIEESVLSIIIFSRDCASLPWCFEELVKIVGFMDEMRSDTVFPVSYDVKES 1231


>gi|357513917|ref|XP_003627247.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521269|gb|AET01723.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1085

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 247/743 (33%), Positives = 364/743 (48%), Gaps = 128/743 (17%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL 62
           S S+SI   P  K+DVF+SFRG D+R +F+SH+  AL R++I  F D KL  G+E+S ++
Sbjct: 45  SPSTSIPA-PQIKYDVFVSFRGSDIRKHFLSHVLEALSRKRIVVFSDKKLKTGDELS-AI 102

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---- 118
             AIE S IS+VIFS  +ASS WC+ ELVKI+E + KYG+I++PVFY V+P+   Y    
Sbjct: 103 QRAIEKSFISLVIFSPNFASSYWCMEELVKIVECREKYGRILMPVFYQVEPTVVRYQNGI 162

Query: 119 ----------------------------------------CPSLGWMGIFDIPTSESVLI 138
                                                   CP L           ++ L+
Sbjct: 163 YRDAFAQHEQNYSSYKVLRWRSALKQSANISGFDSSQFSCCPQLA-------TRDDAKLV 215

Query: 139 EGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTI 198
           E  +  +  KL+ +    +K  L+G+E  I  IES L   S +   +GIWG+ GIGKTTI
Sbjct: 216 EEILQSVLMKLNQVDQGKSKG-LIGIEKQISPIESMLHLESEDVRVLGIWGMPGIGKTTI 274

Query: 199 ASAIYSNISSHFEGSYFMQNIRDESEKVG------------------GLANIHLN----F 236
           A  ++  + S +E   FM N+R+ESE+ G                   L +  +N     
Sbjct: 275 AEEVFRRLRSEYETCCFMANVREESERYGTNSLRLRKKLLSTLLEDEDLKDDMINGLPPL 334

Query: 237 ERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV 296
            ++RLSRMKVLIV  D+ D +Q+++L+G +D   PGSR+IIT RD Q+L      +V  +
Sbjct: 335 VKKRLSRMKVLIVLDDVKDAEQLEVLVGTVDWLGPGSRIIITARDKQVL----SGKVDDI 390

Query: 297 FEVKELSYNDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
           +EV+ L   +S  LF+ +AF  Q H    + +LS  ++ Y  GVPL L+ L + L+G  +
Sbjct: 391 YEVEPLDSAESFQLFNLHAFNKQKHLEMEYYKLSKKMVDYTAGVPLVLKALANLLRGKDK 450

Query: 356 EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC- 414
             WES    LK     ++  V ++ Y  LD  E+ IFLD ACFF G    L +  L    
Sbjct: 451 AIWESQSRNLKIEQIENVHDVFRLIYTNLDYYEKIIFLDIACFFDGLKLKLELINLLLKD 510

Query: 415 -RFSAKIGISRLVGKSLVTISNNKI-TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI 472
             +S    + RL  K+LVTIS   I +MHD++QE   EIVRQES+++PG RSRL  P+DI
Sbjct: 511 RYYSVSTRLERLKDKALVTISQQSIVSMHDIIQETAREIVRQESVEEPGNRSRLLDPDDI 570

Query: 473 YQVLNENTS----LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
           Y VL ++          I L  +KEL L                             P +
Sbjct: 571 YHVLKDDKGSEAIRSMAIRLSEIKELELS----------------------------PQA 602

Query: 529 IGNLSRLVDLDL----TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
              +S+L  LD+    +   G  S+   L +L +  R        LE LP +  + E+L 
Sbjct: 603 FAKMSKLKFLDIYTKGSQNEGSLSLPQGLESLPNELRYLRWEYYPLEFLPSKF-SAENLV 661

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTLS 641
            LNL     +K+    K +  L+ L L +   L  LP+    +++     + C  L ++ 
Sbjct: 662 ILNLPYSRLKKLWHGAKDIVNLNVLILSSSALLTELPDFSKATNLAVLDLQSCVGLTSVH 721

Query: 642 NSSTLLTRSSKHWDIFNFSNCSN 664
            S      S K+ +  + S CS+
Sbjct: 722 PS----VFSLKNLEKLDLSGCSS 740



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)

Query: 499 CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
           C+ LK F   S NI +LDL+ T+I+ELPSSIG  ++L  L L + + ++S+   + NL  
Sbjct: 761 CTALKEFSVTSENINELDLELTSIKELPSSIGLQTKLEKLYLGH-THIESLPKSIKNLTR 819

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLE 584
           LR L+L  C +L+ LPE   +LE+L+
Sbjct: 820 LRHLDLHHCSELQTLPELPPSLETLD 845


>gi|297812011|ref|XP_002873889.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319726|gb|EFH50148.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 901

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 246/735 (33%), Positives = 372/735 (50%), Gaps = 134/735 (18%)

Query: 5   SSSINMIP-HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLS 63
           SSS ++ P H +H VF SF G+DVR  F+SHL      + I TF+D+ + RG  I P L 
Sbjct: 4   SSSFSLQPCHWRHHVFPSFSGEDVRRTFLSHLLKKFQLKGIRTFMDNDIERGQMIGPELI 63

Query: 64  SAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------- 115
            AI  S+ ++V+ S+ YASS+WCL+ELV+I E+  K    V+P+FY V+PSD        
Sbjct: 64  QAIRESRFAVVVLSKTYASSKWCLDELVEIKEASKK----VIPIFYNVEPSDVKNIGGEF 119

Query: 116 ----------------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISK 147
                                       AG C S  W+       SE+ +IE     IS+
Sbjct: 120 GNEFEKACKEKPEKLDRWREALVYVADIAGEC-SQNWV-------SEADMIENIAMSISE 171

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           KL+   PS + + LVG+++ ++E++S L   STE   VGIWG  GIGKTTIA A+++ +S
Sbjct: 172 KLNST-PSRDSENLVGIDAHMREMDSLLFLESTEVKMVGIWGPAGIGKTTIARALFNRLS 230

Query: 208 SHFEGSYFMQNIRDESEKVG----GL-----------------ANIH-LNFERRRLSRMK 245
            +F+ + FM+N++    +      G+                   +H L   + RL  +K
Sbjct: 231 ENFQHTIFMENVKGSYRRTDLDDYGMKLRLQEQFLSEVIDHKHMKVHDLGLVKERLQDLK 290

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VL+V  D+  L+Q+D L+ +   F  GSR+I+TT + QLL+ H    +  ++EV   S  
Sbjct: 291 VLVVLDDVDKLEQLDALVKQSQWFGSGSRIIVTTENKQLLRAHG---IKLIYEVGFPSRG 347

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           +SL +F  +AFGQ+    GF++L+  + K A  +PLAL VLGS L+GM+++E +SA+ +L
Sbjct: 348 ESLQIFCLSAFGQSSAPHGFIKLATEITKLAGYLPLALTVLGSSLRGMNKDEQKSALPRL 407

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           +   + DI+ VL+VSYD L + +++IFL  AC F G +   V   L +       G+  L
Sbjct: 408 RTSLNEDIKNVLRVSYDSLHERDKSIFLHIACLFNGENVDYVKQLLASSGLDVNFGLEVL 467

Query: 426 VGKSLVTIS--NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP 483
             +SL+ IS  N  I MH LL+++G E+V ++SI +P KR  L    DI  VL  ++   
Sbjct: 468 TNRSLINISGFNRTIMMHTLLEQLGREVVYEQSIVEPRKRQFLVDASDICDVLFHDSGAR 527

Query: 484 T----GINLD--SLKELYL-----GGCSNLK--RF---------PEI------------- 508
                GI++D   + E YL      G  NL   RF         PE+             
Sbjct: 528 AVSVLGISMDISKINEWYLNEEAFAGMFNLMFLRFYKSPSSKDQPELNYLPLRLDYLPHK 587

Query: 509 -------SCNIED------------LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV 549
                  +C ++             L+++E+ +E+L      L  L  +DL+    LK +
Sbjct: 588 LRLLHWDACPMKSMPMSFRPEFLVVLNIRESQLEKLWEGAPPLRSLKCMDLSMSENLKEI 647

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSD 608
              L    ++  L LS C  L  LP  I NL  L  L++    + E  PS++K L  LS 
Sbjct: 648 PD-LSEAVNIEELCLSYCRSLVLLPSSIKNLNKLVVLDMTYCSNLESFPSNIK-LESLSI 705

Query: 609 LRLQNCKRLQSLPEL 623
           L L  C RL+S PE+
Sbjct: 706 LNLDRCSRLESFPEI 720



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 7/140 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK + L    NLK  P++S   NIE+L L    ++  LPSSI NL++LV LD+T CS
Sbjct: 630 LRSLKCMDLSMSENLKEIPDLSEAVNIEELCLSYCRSLVLLPSSIKNLNKLVVLDMTYCS 689

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S  S +  L+SL  LNL  C +LE  PE   N   + YL+L+E   + +P+++    
Sbjct: 690 NLESFPSNI-KLESLSILNLDRCSRLESFPEISSN---IGYLSLSETSIKNVPATVASWP 745

Query: 605 KLSDLRLQNCKRLQSLPELP 624
            L  L +  C+ L + P LP
Sbjct: 746 YLEALDMSGCRYLDTFPFLP 765



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 27/140 (19%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           S P+ I L+SL  L L  CS L+ FPEIS NI  L L ET+I+ +P+++ +   L  LD+
Sbjct: 693 SFPSNIKLESLSILNLDRCSRLESFPEISSNIGYLSLSETSIKNVPATVASWPYLEALDM 752

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           + C  L +                        LPE I      ++L+L+ K+ +++P  +
Sbjct: 753 SGCRYLDTFPF---------------------LPETI------KWLDLSRKEIKEVPLWI 785

Query: 601 KQLSKLSDLRLQNCKRLQSL 620
           + L  L  L + +C  L+S+
Sbjct: 786 EDLVLLKKLLMNSCMELRSI 805


>gi|357513231|ref|XP_003626904.1| TMV resistance protein N [Medicago truncatula]
 gi|355520926|gb|AET01380.1| TMV resistance protein N [Medicago truncatula]
          Length = 1179

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 238/692 (34%), Positives = 355/692 (51%), Gaps = 112/692 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG+D+  +FVSHL  AL + +I T+ID  +L+ G E+ P L +AIE S ISI+
Sbjct: 36  YDVFISFRGEDIGKSFVSHLVNALRKARITTYIDGGQLHTGTELGPGLLAAIETSSISII 95

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------------------- 114
           +FS+ Y  S WCL+ L  ++E     GQ+VVPVF+ VDPS                    
Sbjct: 96  VFSKNYTESSWCLDVLQNVMECHISDGQLVVPVFHDVDPSVVRHQKGAFGQVLRDTAKRT 155

Query: 115 ------------------DAGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSD 156
                             +A   P  GW  I     +E  L+E  V D+ +KL+    S 
Sbjct: 156 SRKGEIEDVVSSWKNALAEAVSIP--GWNAI--SFRNEDELVELIVEDVLRKLNKRLLSI 211

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
            K   VG+ES ++++   + + S++    GIWG+GG GKTT A AI++ I+  F  + F+
Sbjct: 212 TKFP-VGLESRVQQVIQFIQNQSSKVCLTGIWGMGGSGKTTTAKAIFNQINLKFMHASFI 270

Query: 217 QNIRD----------------------ESEKVGGLANIHLNFERRRLSRMKVLIVFYDLT 254
           +NIR+                       +EKV  +A   +    R   +  V +V  D+T
Sbjct: 271 ENIREVCIKNDRGIIHLQQQLLSDVMKTNEKVYNIAEGQMMINERFRGK-NVFVVLDDVT 329

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
             +Q+  L    + F PGS +IITTRDV LL      +V +V ++KE+  N+SL LFS +
Sbjct: 330 TFEQLKALCANPEFFGPGSVLIITTRDVHLLDLF---KVDYVCKMKEMDENESLELFSWH 386

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
            F Q +P   F E S  V+ Y  G+PLAL+V+GSY   M++E+W S  +  K +P+  IQ
Sbjct: 387 VFRQPNPREDFSEFSKRVVSYCGGLPLALEVIGSYSNQMTDEDWISVFSNPKTIPNHQIQ 446

Query: 375 KVLKVSYDGLD-DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           + L++SYDGL+ D E++IFLD  CFF G D+  V   L+ C   A  GI+ LV +SL+ +
Sbjct: 447 EKLRISYDGLNQDMEKDIFLDICCFFIGKDRTYVTEILNGCGLDADTGITVLVERSLLKV 506

Query: 434 SN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS 490
            N NK+ MHDL+++MG EIVR+ S K+PGKRSRLW  ED++ +L  N+   T  G+ L S
Sbjct: 507 DNYNKLEMHDLIRDMGREIVRESSAKEPGKRSRLWFHEDVHDILTTNSGTETVEGLVLKS 566

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
            +   +  C +   F +++     L L +    +L    GNLS                 
Sbjct: 567 QRTGRV--CFSTNSFKKMN----QLRLLQLDCVDLTGDYGNLS----------------- 603

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEI--GNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
                 K LR ++  G      +P++   GNL   E   L   + +++ +  K L  L  
Sbjct: 604 ------KELRWVHWQG-FTFNCIPDDFHQGNLVVFE---LKHSNIKQVWNKTKLLVNLKI 653

Query: 609 LRLQNCKRLQSLPE---LPCGSSIHARHCTSL 637
           L L + + L S P+   LP    +  + C SL
Sbjct: 654 LNLSHSRYLTSSPDFSKLPNLEKLIMKDCPSL 685



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 72/131 (54%), Gaps = 5/131 (3%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET-AIEELPSSI 529
           +I QV N+   L     L+     YL    +  + P    N+E L +K+  ++ E+  SI
Sbjct: 637 NIKQVWNKTKLLVNLKILNLSHSRYLTSSPDFSKLP----NLEKLIMKDCPSLSEVHPSI 692

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           G+L++L+ L+L +C GL ++   +  LKSL  L LSGC K++KL E+I  +ESL  L   
Sbjct: 693 GDLNKLLMLNLKDCIGLSNLPKSIYQLKSLNTLILSGCSKIDKLEEDIVQMESLTTLIAN 752

Query: 590 EKDFEKIPSSM 600
               +++P S+
Sbjct: 753 NTAVKEVPFSI 763


>gi|121544148|gb|ABM55688.1| TIR-NBS class disease resistance protein [(Populus tomentosa x P.
           bolleana) x P. tomentosa]
          Length = 509

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 208/518 (40%), Positives = 291/518 (56%), Gaps = 66/518 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           MA   SS   IP   +DVFLSFRG+D R  F  HL AAL    I TF+DD +L RG EIS
Sbjct: 1   MAEPESS-RSIPEGDYDVFLSFRGEDTRKTFTGHLYAALDDAGIRTFLDDNELPRGEEIS 59

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPSD--- 115
             L  AI  SKISIV+FS+GYASSRWCLNELV+IL+ K  K GQIV+P+FY +DPSD   
Sbjct: 60  EHLLKAIRESKISIVVFSKGYASSRWCLNELVEILKCKRKKTGQIVLPIFYDIDPSDVRK 119

Query: 116 --AGYCPSL--------------------------GWMGIFDIPTS-ESVLIEGNVNDIS 146
               +  +                           GW  + D+    E+  I+G + D+ 
Sbjct: 120 QTGCFAEAFDKHEECFEEKLVKEWRKALEDAGNLSGW-NLNDMANGHEAKSIKGIIKDVV 178

Query: 147 KKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
            KL   +     + LVG++ +  +I   L + + +   VGI G+ GIGKTT+A  +++ +
Sbjct: 179 NKLEPKYLY-VPEHLVGMD-LAHDIYDFLSTATDDVRIVGIHGMSGIGKTTLAKVVFNQL 236

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIH------------LNFE---------RRRLSRMK 245
            + FEGS F+ +I + S++  GLA +              NF+         + R+ R +
Sbjct: 237 CNGFEGSCFLSDINETSKQFNGLAGLQKQLLRDILKQDVANFDCVDRGKVLIKERIRRKR 296

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VL+V  D+   +Q++ L+G    F PGSRVIITTRD  LL+          +++KEL   
Sbjct: 297 VLVVADDVAHPEQLNALMGERSWFGPGSRVIITTRDSNLLRE-----ADQTYQIKELKPG 351

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           +SL LFSR+AF  + PA  ++ELS   + Y  G+PLALQV+G+ L   +  EWE  ++ L
Sbjct: 352 ESLQLFSRHAFKDSKPAKDYIELSKKAVDYCGGLPLALQVIGALLYRKNRGEWEREIDNL 411

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISR 424
            R+P+ DIQ  L +SYD LD E Q  FLD ACFF G ++  V   L   CR + ++ +  
Sbjct: 412 SRIPNQDIQGKLLISYDALDGELQRAFLDIACFFIGIEREYVAKVLGVRCRPNPEVVLET 471

Query: 425 LVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPG 461
           L  +SL+  +   KITMHDLL++MG EIVR+ S K+PG
Sbjct: 472 LSERSLIQFNAFGKITMHDLLRDMGREIVRESSPKEPG 509


>gi|357436335|ref|XP_003588443.1| Disease resistance-like protein [Medicago truncatula]
 gi|355477491|gb|AES58694.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1057

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 242/703 (34%), Positives = 367/703 (52%), Gaps = 114/703 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFL+FRG D R  F+ HL  AL  + I TFIDD+ L RG+EI PSL +AIE S+I I 
Sbjct: 18  YQVFLNFRGGDTREGFIGHLYKALTDKGIHTFIDDRELQRGDEIKPSLDNAIEESRIFIP 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           +FS  YASS +CL+ELV I+    K G++++PVFY VDP+                    
Sbjct: 78  VFSINYASSSFCLDELVHIIHCYKKKGRLILPVFYGVDPTHIRHQSGSYGEHLTKHEESF 137

Query: 116 -----------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDL 152
                                  +GY  S G+         E   I   V  IS K+S  
Sbjct: 138 QNSKKNMERLHQWKLALTQASNLSGYHSSRGY---------EYKFIGEIVKYISNKISRE 188

Query: 153 FPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            P    +  VG+ S +++++  L +GS +  + VGI+GIGG+GK+T+A AIY+ I+  FE
Sbjct: 189 -PLHVANYPVGLWSQVQQVKLLLDNGSDDGVHMVGIYGIGGLGKSTLARAIYNFIADQFE 247

Query: 212 GSYFMQNIRDESE-------------KVGGLANIHLNFE-------RRRLSRMKVLIVFY 251
           G  F+ ++R+ S              K  GL  I L+         + RL R K+L++  
Sbjct: 248 GLCFLHDVRENSAISNLKHLQEKLLLKTTGL-EIKLDHVSEGIPIIKERLCRKKILLILD 306

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+ D+KQ+  L G LD F  GSRV++TTRD QLL  H G    H  EV+ L   ++L L 
Sbjct: 307 DVNDIKQLHALAGGLDWFGYGSRVVVTTRDKQLLTCH-GIESTH--EVEGLYGTEALELL 363

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
           S  AF  +   + + E+    + YA+G+PL L+++GS L G S EEW+  ++   ++P+ 
Sbjct: 364 SWMAFKNDPVPSIYNEILIRAVAYASGLPLVLEIVGSNLFGKSIEEWKGTLDGYDKIPNK 423

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVG 427
           +IQK+LKVSYDGL++EEQ++FLD AC FKG +    ++++ +    C  +  +G+  L  
Sbjct: 424 EIQKILKVSYDGLEEEEQSVFLDIACCFKGYEWEDAKHILHSHYGHC-ITHHLGV--LAE 480

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------- 480
           KSL+    + +T+HD++++MG E+VRQES K+PG+RSRLW  +DI  VLN+NT       
Sbjct: 481 KSLIDQYYSHVTLHDMIEDMGKEVVRQESPKEPGERSRLWCQDDIVHVLNKNTGTSKVEM 540

Query: 481 ------SLPTGIN--------LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP 526
                 S+   I+        + +LK L +      K    +  +++ L  K    E L 
Sbjct: 541 IYMNFHSMEPVIDQKGKAFKKMTNLKTLVIENGHFSKGLKYLRSSLKVLKWKGFTSESLS 600

Query: 527 SSIGNLSRLVDLD---LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           S   N  +  D++   L +C  L  +S  +  L +L++L+   C  L  +   +G L  L
Sbjct: 601 SCFSN-KKFQDMNVLILDHCEYLTHISD-VSGLPNLKKLSFKDCKNLITIHNSVGYLIKL 658

Query: 584 EYLN-LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           E L+ +  +  +  P    QL  L ++ L  C  L S P+L C
Sbjct: 659 EILDAMGCRKLKSFPPL--QLPSLKEMELSGCWSLNSFPKLLC 699



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 39/272 (14%)

Query: 395 TACFFKGNDQYLVMNFLDACRFSAKIG-ISRLVGKSLVTISN--NKITMHDLLQEMGGEI 451
           ++CF     Q + +  LD C +   I  +S L     ++  +  N IT+H+ +    G +
Sbjct: 600 SSCFSNKKFQDMNVLILDHCEYLTHISDVSGLPNLKKLSFKDCKNLITIHNSV----GYL 655

Query: 452 VRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC- 510
           ++ E +   G R                 S P  + L SLKE+ L GC +L  FP++ C 
Sbjct: 656 IKLEILDAMGCRKL--------------KSFPP-LQLPSLKEMELSGCWSLNSFPKLLCK 700

Query: 511 --NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL-------KSVSSRLCNLKSLRR 561
             NIE++ L ET+I ELPSS  NLS L  L L    G+       K  S    N+K+L  
Sbjct: 701 MTNIENILLYETSIRELPSSFQNLSGLSRLSLEG-RGMRFPKHNGKMYSIVFSNVKALSL 759

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +N +  L  E LP  +    ++ YLNL +  F+ +P  + +   L  + +  CK L+ + 
Sbjct: 760 VNNN--LSDECLPILLKWCVNVIYLNLMKSKFKTLPECLSECHHLVKINVSYCKYLEEIR 817

Query: 622 ELPCG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
            +P     + A  C S   LS+SS  +  S K
Sbjct: 818 GIPPNLKELFAYECNS---LSSSSKRMLLSQK 846


>gi|356558276|ref|XP_003547433.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 1106

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 208/530 (39%), Positives = 304/530 (57%), Gaps = 72/530 (13%)

Query: 7   SINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSA 65
           S N  P  K+DVF+SFRGKD+R  F+SHL     R+KI  F+D+  L +G+EI PSL+ A
Sbjct: 2   SDNNSPETKYDVFVSFRGKDIRDGFLSHLTDTFLRKKINVFVDETNLKKGDEIWPSLAVA 61

Query: 66  IEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLG-- 123
           IE S IS++IFS+ YASSRWCL ELVKILE + KYG+IV+P+FY V P +  +   LG  
Sbjct: 62  IEVSSISLIIFSQDYASSRWCLEELVKILECREKYGRIVIPIFYHVQPKNVRH--QLGSY 119

Query: 124 -----------------WMGIFDIPT-----------SESVLIEGNVNDISKKLSDLFPS 155
                            W    +I             +++ LI+  VN +  KL+   PS
Sbjct: 120 ENIFAQRGRKYKTKVQIWKDALNISADLSGVESSRFQNDAELIQEIVNVVLNKLAK--PS 177

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
            N   +VG++  I  +E  +     +   +GIWG+GGIGK+T+A  + + + S FEG YF
Sbjct: 178 VNSKGIVGIDEEIANVELLISKEPKKTRLIGIWGMGGIGKSTLAEKVLNKLRSGFEGCYF 237

Query: 216 MQNIRDESEKVGGLANIHLNFER-------------------RRLSRMKVLIVFYDLTDL 256
           + N R++S + G ++     F                     RR+S MKVL++  D+ DL
Sbjct: 238 LANEREQSNRHGLISLKEKIFSELLGYDVKIDTLYSLPEDIVRRISCMKVLLILDDVNDL 297

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
             ++ L+G LD F  GSR+I+TTRD Q+LK    ++V  ++ ++E +++ +L  F+ N F
Sbjct: 298 DHLEKLLGTLDNFGSGSRIIVTTRDEQVLK---ANKVDEIYRLREFNHDKALEFFNLNTF 354

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
            Q+     +  LS  V+ YA G+PL L+VL   L+G  +E WES ++KL+RMP   +   
Sbjct: 355 NQSDDQREYSTLSEKVVDYARGIPLVLKVLAHLLRGRKKEIWESELDKLRRMPPTTVYDA 414

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF--------SAKIGISRLVGK 428
           +K+SYD LD +EQ +FLD ACFF  +  ++++N  +            S  +G+ RL  K
Sbjct: 415 MKLSYDDLDRKEQQLFLDLACFFLRS--HIIVNVSNVKSLLKDGESDNSVVVGLERLKDK 472

Query: 429 SLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP-EDIYQVL 476
           +L+TIS +N I+MHD LQEM  EIVR+E   DP  RS LW P +DIY+ L
Sbjct: 473 ALITISEDNCISMHDCLQEMAWEIVRRE---DPESRSWLWDPNDDIYEAL 519



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 37/220 (16%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET------------------- 520
           T L +  +L SL  L L  C NL  F  IS N+++L L+ T                   
Sbjct: 691 TRLASDCHLCSLCYLNLDYCKNLTEFSLISENMKELGLRFTKVKALPSTFGCQSKLKSLH 750

Query: 521 ----AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP-- 574
               AIE LP+SI NL++L+ L+++ C  L++++     L++L     +    L++LP  
Sbjct: 751 LKGSAIERLPASINNLTQLLHLEVSRCRKLQTIAELPMFLETLDVYFCTSLRTLQELPPF 810

Query: 575 ------EEIGNLESLEYLNLAEKDFE-KIPSSMKQLSK----LSDLRLQNCKRLQSLPEL 623
                 ++  +L++L  L L+ K    K   S++ L K    L  L ++ C  LQ+LPEL
Sbjct: 811 LKTLNVKDCKSLQTLAELPLSLKTLNVKECKSLQTLPKLPPLLETLYVRKCTSLQTLPEL 870

Query: 624 PCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           PC   +++A +CTSLKT+   ST + +  ++     F NC
Sbjct: 871 PCFVKTLYAIYCTSLKTVLFPSTAVEQLKENRTRVLFLNC 910



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 43/207 (20%)

Query: 460 PGKR-SRLWHPEDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISC--NIEDL 515
           PG R  +LWH                G+ NL +LK+L LG    LK  P++S   N+E L
Sbjct: 615 PGGRIEKLWH----------------GVKNLVNLKQLDLGWSQMLKELPDLSKARNLEVL 658

Query: 516 DLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC------- 567
            L   + +  +  SI +L +L  LDL NC  L  ++S  C+L SL  LNL  C       
Sbjct: 659 LLGGCSMLSSVHPSIFSLPKLEKLDLWNCRSLTRLASD-CHLCSLCYLNLDYCKNLTEFS 717

Query: 568 -------------LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
                         K++ LP   G    L+ L+L     E++P+S+  L++L  L +  C
Sbjct: 718 LISENMKELGLRFTKVKALPSTFGCQSKLKSLHLKGSAIERLPASINNLTQLLHLEVSRC 777

Query: 615 KRLQSLPELPCG-SSIHARHCTSLKTL 640
           ++LQ++ ELP    ++    CTSL+TL
Sbjct: 778 RKLQTIAELPMFLETLDVYFCTSLRTL 804


>gi|6721163|gb|AAF26791.1|AC016829_15 putative disease resistance protein [Arabidopsis thaliana]
          Length = 896

 Score =  325 bits (834), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 251/762 (32%), Positives = 372/762 (48%), Gaps = 135/762 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF SFRG+DVR +F+SH+     R+ I  F+D+ + RG  I P L  AI GSKI+I+
Sbjct: 62  KYDVFPSFRGEDVRKDFLSHIQKEFQRQGITPFVDNNIKRGESIGPELIRAIRGSKIAII 121

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YCPSL 122
           + S+ YASS WCL+ELV+I++ K + GQ V+ +FY VDPS       D G      C   
Sbjct: 122 LLSKNYASSSWCLDELVEIIKCKEEMGQTVIVIFYKVDPSLVKKLTGDFGKVFRNTCKGK 181

Query: 123 G------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   F    +           ES +IE  V+DIS+ L+   PS + D L+G+ 
Sbjct: 182 ERENIERWREAFKKVATIAGYDSRKWDNESGMIEKIVSDISEMLNHSTPSRDFDDLIGMG 241

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
             +++++  L   S E  T+GIWG  G+GKTTIA ++Y+  S  F+ S FM++I+     
Sbjct: 242 DHMEKMKPLLDIDSDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAYTI 301

Query: 221 -----DESEK----------VGGLANI---HLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                D  EK          +    N+   HL   + RL+  KVL+V  D+    Q+D L
Sbjct: 302 PACSDDYYEKLQLQQRFLSQITNQENVQIPHLGVAQERLNDKKVLVVIDDVNQSVQVDAL 361

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
               D   PGSR+IITT+D  +L+ H    + H++EV   +Y ++L +F  +AFGQ  P 
Sbjct: 362 AKENDWLGPGSRIIITTQDRGILRAHG---IEHIYEVDYPNYEEALQIFCMHAFGQKSPY 418

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD--IQKVLKVS 380
            GF EL+  V   +  +PL L+V+GSY +GM+++EW  A+ +++   H+D  I+ +LK+S
Sbjct: 419 DGFEELAQQVTTLSGRLPLGLKVMGSYFRGMTKQEWTMALPRVR--THLDGKIESILKLS 476

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           YD L D ++++FL  AC F  +D  LV   L       + G+  L  KSL+ +    I M
Sbjct: 477 YDALCDVDKSLFLHLACSFHNDDTELVEQQLGKKFSDLRQGLHVLAEKSLIHMDLRLIRM 536

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD----------S 490
           H LL ++G EIVR++SI +PG+R  L    DI +VL ++T   + I +D           
Sbjct: 537 HVLLAQLGREIVRKQSIHEPGQRQFLVDATDIREVLTDDTGSRSVIGIDFDFNTMEKELD 596

Query: 491 LKELYLGGCSNLK--------------------------------RFPE----ISCNIED 514
           + E    G SNL+                                 FP     +   +  
Sbjct: 597 ISEKAFRGMSNLQFIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFPRGLDYLPGKLRL 656

Query: 515 LDLKETAIEELPSSIGN---------LSRLVDL-----DLTNCSGLKSVSSRLCNLKSL- 559
           L  ++  +  LPS              S+L  L      L N   L    SR  NLK L 
Sbjct: 657 LHWQQFPMTSLPSEFHAEFLVKLCMPYSKLEKLWEGIQPLRNLEWLDLTCSR--NLKELP 714

Query: 560 --------RRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLR 610
                   +RL++  C  L KLP  IG   +L+ +NL E     ++PSS   L+ L +L 
Sbjct: 715 DLSTATNLQRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGNLTNLQELD 774

Query: 611 LQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLT 648
           L+ C  L  LP     L    S+    C+SL  L ++   LT
Sbjct: 775 LRECSSLVELPTSFGNLANVESLEFYECSSLVKLPSTFGNLT 816



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 86/171 (50%), Gaps = 12/171 (7%)

Query: 476 LNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKET-AIEELPSSIGN 531
           L E   L T  NL   + L +  CS+L + P     + N++ ++L+E  ++ ELPSS GN
Sbjct: 710 LKELPDLSTATNL---QRLSIERCSSLVKLPSSIGEATNLKKINLRECLSLVELPSSFGN 766

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
           L+ L +LDL  CS L  + +   NL ++  L    C  L KLP   GNL +L  L L E 
Sbjct: 767 LTNLQELDLRECSSLVELPTSFGNLANVESLEFYECSSLVKLPSTFGNLTNLRVLGLREC 826

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSL 637
               ++PSS   L+ L  L L+ C  L  LP     L    ++  R C+SL
Sbjct: 827 SSMVELPSSFGNLTNLQVLNLRKCSTLVELPSSFVNLTNLENLDLRDCSSL 877


>gi|359496032|ref|XP_003635136.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1050

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 256/754 (33%), Positives = 366/754 (48%), Gaps = 163/754 (21%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R+ F  HL                  RG  I+P+L +AIEGS+ SI+
Sbjct: 12  KYDVFLSFRGEDTRYTFTDHLR-----------------RGELITPALVTAIEGSRHSII 54

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSL------- 122
           + SE YASS+WCL+ELVKIL+S+N   +  VP+FY V+PSD G     +  +L       
Sbjct: 55  VLSENYASSKWCLDELVKILQSQNTKERRAVPIFYNVNPSDVGNQRGSFGKALADHEEKL 114

Query: 123 ----------------GWMGIF-----------DIPTSESVLIEGNVNDISKKLSDLFPS 155
                           GW                   SE+  IE  V DISK L+ +  S
Sbjct: 115 KADHEKKLKYDMERVQGWRKALTQVGKISGFTSSRDKSETQFIEEIVTDISKDLNCVSSS 174

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
           D+K+ LVG+   I+++ES L   ST+   VGIWG+GGIGKTT+A  IY  +   FEG  F
Sbjct: 175 DSKN-LVGMNCCIRKLESLLCLESTKVLMVGIWGMGGIGKTTLARVIYERLFCQFEGYCF 233

Query: 216 MQNIRDES---------EKVGGLANIHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           ++ ++  S          KV G  NI++     + RL   KVL+V  D+     ++ L+G
Sbjct: 234 LEGLKSTSMDNLKAELLSKVLGNKNINMGLTSIKARLHSKKVLLVIDDVNHQSMLETLVG 293

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F P SR+IITTRD  LL       V  V++V++L  ++ L                
Sbjct: 294 GHDWFGPQSRIIITTRDKHLLTVQG---VDVVYKVQKLEDDNLL---------------- 334

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
                + +  YA G+PLAL+VLG  L   + + W   +N+LK+ P+ +IQ+VL++S+ GL
Sbjct: 335 -----DQITSYAQGLPLALKVLGCSLCDRNADYWTDMLNQLKKFPNEEIQEVLQISFRGL 389

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDL 443
            D E++IFLD ACFF+G  +  V   L++C F+   GI  L+ KSL+T++ +N++ MHDL
Sbjct: 390 KDNEKDIFLDIACFFRGRGKTFVRKILESCGFTVVSGIENLIDKSLITLTRDNRLEMHDL 449

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGI--NLDSLKEL----- 494
           LQEMG +IVR+ S K+PGKRSRLW  +DI  +L   T      GI  NL  L+E+     
Sbjct: 450 LQEMGWQIVRKTS-KEPGKRSRLWEQKDISHILKWETGAQEVEGIFFNLSGLEEMNFTTK 508

Query: 495 YLGGCSNLKRFPEISCNIED------------------------LDLKETAIEELPSSI- 529
                +NL+       N+ D                        L   E   E LPS   
Sbjct: 509 AFSQMTNLRLLEIYRSNLRDTGGKMQCKLHISDDFKFHYDELRYLHWDEYPCESLPSDFE 568

Query: 530 -----------GNLSRLVD----------LDLTNCSGLKSVS--SRLCNLKSLRRLNLSG 566
                       +L++L            +D++    LK     SR  NL+ L    L G
Sbjct: 569 SENLVHFCMPRSHLTQLWKGQKVFGHLEFVDVSYSQYLKKTPDFSRATNLEVLV---LKG 625

Query: 567 CLKLEKLPEEIGNLESLEYLNLAEK-DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           C  L K+   +G L  L  LN+    + E +P S++ L  L    L  C +L+ L E+P 
Sbjct: 626 CTNLRKVHPSLGYLSKLILLNMENCINLEHLP-SIRWLVSLRTFILSGCSKLEKLQEVP- 683

Query: 626 GSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
                 +H   L  L    T +T  S   ++ NF
Sbjct: 684 ------QHMPYLSKLCLDGTAITDFSGWSELGNF 711



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 24/196 (12%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPS---------SI 529
           LP+   L SL+   L GCS L++  E+  +   +  L L  TAI +            + 
Sbjct: 656 LPSIRWLVSLRTFILSGCSKLEKLQEVPQHMPYLSKLCLDGTAITDFSGWSELGNFQENS 715

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS--GCLKLEKLPEEIGNLESLEYLN 587
           GNL  L +L+  + +  +  SS +     LR  N S     +  +       L SL YLN
Sbjct: 716 GNLDCLSELNSDDSTIRQQHSSSVV----LRNHNASPSSAPRRSRFISPHCTLTSLTYLN 771

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
           L+      +P ++++LS L  L L NC+RLQ+LP LP     ++A +CTSL+ +S  S  
Sbjct: 772 LSGTSIIHLPWNLERLSMLKRLELTNCRRLQALPVLPSSIECMNASNCTSLELISPQSVF 831

Query: 647 LTRSSKHWDIFNFSNC 662
                K +  F F NC
Sbjct: 832 -----KRFGGFLFGNC 842


>gi|449438044|ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 996

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 244/687 (35%), Positives = 367/687 (53%), Gaps = 94/687 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL  A     I  F DD +L RG +IS  L  AIEGSK+++V
Sbjct: 14  YDVFLSFRGEDTRKNFTDHLYYAFKDAGINVFRDDPELERGEDISSELERAIEGSKVAVV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           +FSE YA S WCL ELVKI+E +    Q+V P+FY VDPS                +  Y
Sbjct: 74  VFSERYAESGWCLEELVKIMECRRTLRQLVFPIFYNVDPSCVRKQKGEFEEAFVKHEVRY 133

Query: 119 CPSLGWMGIFDIPTSESVLIEGN-----------------VNDISKKLSD------LFPS 155
              +  +  + +  +E+  + G                  V  +SK+++       L+P 
Sbjct: 134 FRDIDRVLKWRMALTEAANLSGWDLRNIANGHEAKFIRLIVEKVSKEVNSKYLFIALYP- 192

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
                 VG+ES +K + S L  GS +   VGI G+GG+GKTT+A A+Y+ +  +FE   F
Sbjct: 193 ------VGIESRLKLLLSHLHIGSNDVRFVGILGMGGLGKTTVAKALYNQLYHNFEAKCF 246

Query: 216 MQNIRDESEKVGGL-----------ANIHL-NFER------RRLSRMKVLIVFYDLTDLK 257
           + NI+ E+  +  L            NI+L N ++       RL   ++L++  D+ DL 
Sbjct: 247 LSNIKAETSNLIHLQKQLLSSITNSTNINLGNIDQGIAVLQERLRCKRLLLILDDVDDLS 306

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+  L    D F  GSR+IITTRD  LL       V  +  + E+  +++L LFS +AF 
Sbjct: 307 QLTALATTRDLFASGSRIIITTRDRHLLNQ---LEVDEICSIDEMDDDEALELFSWHAFR 363

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
            ++P+  F +LS  VI Y  G+PLAL+VLGS+L G S EEWE  + KLK++P+  IQK L
Sbjct: 364 NSYPSETFHQLSKQVITYCGGLPLALEVLGSFLFGRSREEWEDTLKKLKKIPNDQIQKKL 423

Query: 378 KVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN- 435
           K+S+DGL+D   ++IFLD +CFF G ++  V   LD C F  +IGIS L+ + L+TI + 
Sbjct: 424 KISFDGLNDHTYKDIFLDVSCFFIGMERNYVEQILDGCGFFPRIGISVLLQRCLLTIGDK 483

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD---- 489
           N++ MHDLL++MG EIVR+   K P + SRL+  E++  VL   + T    G++L     
Sbjct: 484 NRLMMHDLLRDMGREIVRENFPKYPERHSRLFLHEEVLSVLTRQKGTDATEGLSLKLPRF 543

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDL--DLKETA------------IEELPSSIGNLSRL 535
           S ++L     + +++   +  N  D+  D K  +            ++ LP    ++ +L
Sbjct: 544 SKQKLSTKAFNEMQKLRLLQLNFVDVNGDFKHISEEIRWVCWHGFPLKFLPKEF-HMDKL 602

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
           V +DL   S ++        LK+L+ LNL     L   P     L +LE L+L + K+  
Sbjct: 603 VAMDL-RYSQIRFFWKESKFLKNLKFLNLGHSHYLTHTP-NFSKLPNLEILSLKDCKNLI 660

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           ++  ++ +L  L  L L++CK L SLP
Sbjct: 661 ELHPTIGELKALISLNLKDCKSLNSLP 687



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 19/179 (10%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L +LK L LG    L   P  S   N+E L LK+   + EL  +IG L  L+ L+L +C 
Sbjct: 622 LKNLKFLNLGHSHYLTHTPNFSKLPNLEILSLKDCKNLIELHPTIGELKALISLNLKDCK 681

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L S+ +   NLKSL+ L +S          +IG+L SL  L+L+E  F  +PS++  L 
Sbjct: 682 SLNSLPNSFSNLKSLQTLIIS----------DIGSLSSLRELDLSENLFHSLPSTISGLL 731

Query: 605 KLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           KL  L L NC  LQ +P LP   SS++A +CTSL+  S+ S +    S      + SNC
Sbjct: 732 KLETLLLDNCPELQFIPNLPPHLSSLYASNCTSLERTSDLSNVKKMGS-----LSMSNC 785


>gi|356542401|ref|XP_003539655.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1014

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 258/707 (36%), Positives = 361/707 (51%), Gaps = 107/707 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF G D RH+F  +L  +L +  I  FIDD+ L RG EI+P+L  AI  S+I I+
Sbjct: 18  YDVFLSFSGIDTRHSFTDNLYNSLKQRGIHAFIDDEGLRRGEEITPTLLKAIRESRIGII 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL------------ 122
           +FS+ YASS +CL+ELV+ILE     G++V PVFY VDPS   Y                
Sbjct: 78  VFSKSYASSTYCLDELVEILECLKVEGRLVWPVFYDVDPSQVRYQTGTYAEALAKHKERF 137

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW        SE   I+  V++ SKK++   P    D  
Sbjct: 138 QDDKGKVQKWRKALHEAANLSGWHFQHG-SESEYKFIKKIVDEASKKINRT-PLHVADNP 195

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ES + E+ S L SGS E + VGI+GIGGIGKTT+A A Y+ I+  FEG  F+ +IR+
Sbjct: 196 VGLESSVLEVMSLLGSGS-EVSMVGIYGIGGIGKTTVARAAYNMIADQFEGLCFLADIRE 254

Query: 222 ESE----------------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           ++                       KVG ++   +    RRL + KVL++  D+  L Q+
Sbjct: 255 KAISKHRLVQLQETLLSDILGEKDIKVGDVSR-GIPIIERRLRKKKVLLILDDVDKLVQL 313

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L G    F  GS++IITTRD +LL  H    V  + EVK+L+   +  LFS +AF +N
Sbjct: 314 QVLAGGYCWFGSGSKIIITTRDKKLLATHG---VVKLHEVKQLNDEKAFELFSWHAFKRN 370

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                ++++ N  + YA G+PLAL+V+GS+L G S +E  SA++K +R+PH  I  +LKV
Sbjct: 371 KFDPSYVDILNRAVFYACGLPLALEVIGSHLFGKSLDECNSALDKYERIPHRGIHDILKV 430

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-I 438
           SYDGL+++E+ IFLD ACFF   +   V   L A  F A+ GI  L  KSL+ I  +  +
Sbjct: 431 SYDGLEEDEKGIFLDIACFFNTCNMRFVKQMLHARGFHAEDGIRVLSDKSLIKIDESGCV 490

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----PTGINLDSLKEL 494
            MHDL+Q MG EIVRQES   P KRSRLW  EDI +VL EN          +N+   KE+
Sbjct: 491 KMHDLIQHMGREIVRQESKLKPRKRSRLWLDEDIVRVLEENKGTDKIEAIMLNVRDKKEV 550

Query: 495 YLGG-----CSNLKRFPEISCNI--------------------------EDLDLKETAIE 523
              G       NLK    I   I                           D + KE  I 
Sbjct: 551 QWSGKAFKKMKNLKILVIIGQAIFSSIPQHLPNSLRVLEWSSYPSPSLPPDFNPKELEIL 610

Query: 524 ELPSS-------IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
            +P S       +     L+ ++  +C  L  + S LC +  LR L+L  C  L K+ + 
Sbjct: 611 NMPQSCLEFFQPLKRFESLISVNFEDCKFLTELHS-LCEVPFLRHLSLDNCTNLIKVHDS 669

Query: 577 IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +G L++L +L+       +I     +L  L  L L  C RL+S PE+
Sbjct: 670 VGFLDNLLFLSAIGCTQLEILVPCIKLESLEFLDLTECFRLKSFPEV 716



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           T + ++  S+G L  L+ L    C+ L+ +   +  L+SL  L+L+ C +L+  PE +G 
Sbjct: 661 TNLIKVHDSVGFLDNLLFLSAIGCTQLEILVPCI-KLESLEFLDLTECFRLKSFPEVVGK 719

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           ++ ++ + L +    K+P S+  L  L  L L+ C +L  LP
Sbjct: 720 MDKIKDVYLDKTGITKLPHSIGNLVGLERLYLRQCTQLYQLP 761



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L+SL+ L L  C  LK FPE+      I+D+ L +T I +LP SIGNL  L  L L  
Sbjct: 694 IKLESLEFLDLTECFRLKSFPEVVGKMDKIKDVYLDKTGITKLPHSIGNLVGLERLYLRQ 753

Query: 543 CSGL 546
           C+ L
Sbjct: 754 CTQL 757


>gi|297815270|ref|XP_002875518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321356|gb|EFH51777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1080

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 248/746 (33%), Positives = 367/746 (49%), Gaps = 149/746 (19%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR NF+SH+     R+ I TF+D+++ RG  I P L  AI GSKI++V+
Sbjct: 53  HQVFPSFRGEDVRRNFLSHIQKEFQRKGITTFVDNEIKRGESIGPKLIHAIRGSKIALVL 112

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG--------------YCPS 121
            S+ YASS WCL+ELV+I++ K + GQ V+P+FY +DPSD                 C +
Sbjct: 113 LSKNYASSSWCLDELVEIMKCKEELGQTVLPIFYKIDPSDVKKLTGKFGSAFKNICACKT 172

Query: 122 ----LGW-MGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 W   +  + T+          E+ +IE   +DI K L+   PS +   L+G+E+
Sbjct: 173 NEIIRKWRQALAKVATTTGYSSRNWDNEADMIEKISSDILKMLNYTTPSSDFGGLIGMEA 232

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD----- 221
            +K++E  L   S E   +GIWG  GIGKT IA  +++  +  FE S F++NI++     
Sbjct: 233 HMKKMEQLLCLDSDEVRMIGIWGPSGIGKTIIARVLFNQFNGSFELSVFVENIKELMCRP 292

Query: 222 ------------ESEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
                       + + +  + N       HL   +  L   KVL+V  ++    Q+D + 
Sbjct: 293 LCSDDYSTKLHIQRQFMSQITNHKEMEICHLGVVQDMLHDKKVLVVLDNIDQSIQLDAIA 352

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F  GSR+IITT D +LLK H    + H+++V   S +++  +F   AFGQ  P  
Sbjct: 353 KETCWFGQGSRIIITTHDQKLLKAH--DDINHIYKVGFPSASEACQIFCMYAFGQKFPKD 410

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF +L+  V K   G+PL L+V+GS+ +GMS+EEW +A+ +LK      IQ +LK SYD 
Sbjct: 411 GFEDLAWQVTKLLGGLPLGLRVMGSHFRGMSKEEWINALPRLKTRLDSSIQSILKFSYDA 470

Query: 384 LDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           L DE++++FL  AC F        +++L   FLD      + G+  L  K L++I    I
Sbjct: 471 LWDEDKDLFLHIACLFNNKRTSKVEEHLAHKFLD-----VRQGLYVLAEKCLISIDTEWI 525

Query: 439 TMHDLLQEMGGEIVRQE----SIKDPGKRSRLWHPEDIYQVLNENT--SLPTGINLD--- 489
            MH+LL+++G EIVR E    SI DPGKR  L    DI +VL ++T  S   GI+ D   
Sbjct: 526 KMHNLLEQLGKEIVRHEPGHQSICDPGKRQLLVDARDICEVLTDDTGSSSVIGIHFDPSE 585

Query: 490 -----SLKELYLGGCSNLKRFPEISCNIED-------------LDLKETA---------- 521
                ++ E    G SNLK F    C   D             L  K T           
Sbjct: 586 LLGELNISEGAFEGMSNLK-FLRFKCTYGDQSDKLYLPKGLSLLSPKLTTMGLFSDVMFA 644

Query: 522 ---------------------IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
                                ++ELP ++   ++L +L L +C+ L  + S + N  SL+
Sbjct: 645 FQFLYEPLENLKWMVLSYSKNLKELP-NLSTATKLQELFLIDCTSLVELPSSIGNAISLQ 703

Query: 561 R------------------------LNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
                                    LNLSGC  L +LP  IGN  +LE L++    D  K
Sbjct: 704 TLHLGECKSIVELPSCFGNAINLSWLNLSGCSSLVELPSSIGNATNLEILHMDMCTDVVK 763

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +PSS+  L KL +  L+ C +L+ LP
Sbjct: 764 LPSSIGNLYKLREFTLKGCLKLEILP 789



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT INL+SL EL L  C  LKRFPEIS NI+ L L  TA+EE+PSSI + SRL DL ++
Sbjct: 788 LPTNINLESLDELNLTDCLLLKRFPEISTNIKHLYLNGTAVEEVPSSIKSWSRLDDLHMS 847

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK                        K P  +  + +L Y+N  + +  +IP  + 
Sbjct: 848 YSESLK------------------------KFPHALDIITTL-YVN--DLEMHEIPLWVT 880

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           ++S L  L+L  CK+L SLP+LP   S + A +C SL+ L  S
Sbjct: 881 KISCLRGLKLNGCKKLVSLPQLPDSLSYLEAVNCESLERLDFS 923



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 87/166 (52%), Gaps = 27/166 (16%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKE-TAIEELPSSIGNLSRLV 536
           LP+ I N  SL+ L+LG C ++   P     + N+  L+L   +++ ELPSSIGN + L 
Sbjct: 692 LPSSIGNAISLQTLHLGECKSIVELPSCFGNAINLSWLNLSGCSSLVELPSSIGNATNLE 751

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KD 592
            L +  C+ +  + S + NL  LR   L GCLKLE LP  I NLESL+ LNL +    K 
Sbjct: 752 ILHMDMCTDVVKLPSSIGNLYKLREFTLKGCLKLEILPTNI-NLESLDELNLTDCLLLKR 810

Query: 593 F-----------------EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           F                 E++PSS+K  S+L DL +   + L+  P
Sbjct: 811 FPEISTNIKHLYLNGTAVEEVPSSIKSWSRLDDLHMSYSESLKKFP 856


>gi|224123354|ref|XP_002319058.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857434|gb|EEE94981.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 522

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 214/522 (40%), Positives = 288/522 (55%), Gaps = 68/522 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL  AL    I TF DD +L +G EIS  L  AI+ SKISIV
Sbjct: 10  YDVFLSFRGEDTRKNFTDHLYTALQNAGIHTFRDDNELPKGEEISSHLLKAIKESKISIV 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           +FS+GYASS WCL+EL +IL+ +   GQIV+PVFY +DPSD                   
Sbjct: 70  VFSKGYASSTWCLDELSEILDCRQTAGQIVLPVFYDIDPSDIRKQTGSFAEAFDRHEERF 129

Query: 116 ----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                           AG    L    I +    ES LI+  V ++   LS L P   K 
Sbjct: 130 KEEMEKVQKWRKALVEAGRLSGLDLHSIAN--GHESKLIQMIVEEV---LSKLNPRYMKV 184

Query: 160 QL--VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
               VG++S +K+I S L  G+ E   VGI+G+ GIGKTTIA A+++ I   FEGS  + 
Sbjct: 185 ATYPVGIDSQVKDIISMLCVGTNEVRIVGIYGMPGIGKTTIAKAVFNQICHQFEGSSCLL 244

Query: 218 NIRDE---------------SEKVGGLANIHLNFE----RRRLSRMKVLIVFYDLTDLKQ 258
           NIR+                 +   G   IH + +    + +  R +VL++  D+  LK 
Sbjct: 245 NIRERLDQHRGLLQLQQQLLRDAFKGYIRIHDDDDEDGIKSQFCRKRVLVILDDVDQLKH 304

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L G  D F PGSR++ITTRD +LL       V   +  + L+ ++SL LFS +AF +
Sbjct: 305 LRGLAGERDWFGPGSRIVITTRDERLLTR---LEVEKQYHAEGLNNDESLQLFSWHAFKK 361

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL-KRMPHMDIQKVL 377
            HP   ++ELS +V+ Y  GVPLAL+VLGS L   S   W S + KL K +PH  IQ+ L
Sbjct: 362 PHPMKEYVELSKVVVDYVGGVPLALEVLGSKLFKRSITHWRSFIEKLQKHLPHQ-IQRQL 420

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNN 436
             S D LD E + +FLD ACFF G D+  V   LD   F  ++G   L  +SL+T+ S N
Sbjct: 421 ITSLDDLDGEVKGMFLDIACFFNGMDKDYVGKILDGRGFYPEMGFDILRERSLLTVNSEN 480

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
           ++ M +LL++MG EI+ Q +   PGKRSRLWH EDI  VL++
Sbjct: 481 ELQMDNLLRDMGREIIHQMAPNHPGKRSRLWHREDIMDVLDK 522


>gi|224144414|ref|XP_002325282.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862157|gb|EEE99663.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 520

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 202/521 (38%), Positives = 287/521 (55%), Gaps = 63/521 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL  AL    I TF DD +L RG EISP L  AIEGS+ISIV
Sbjct: 1   YDVFLSFRGEDTRKNFTDHLYTALGNAGIHTFRDDNELPRGEEISPQLLKAIEGSRISIV 60

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS+ YASSRWCL+ELVKI+E + K GQ+V+P+FY  +PSD       Y  +        
Sbjct: 61  VFSKHYASSRWCLDELVKIIECRQKIGQVVLPIFYDTEPSDVRKQTGSYAKAFDEHEERF 120

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW    +    E+  I+  V+D++ KL +      K   
Sbjct: 121 KEEMEKVNKWRGALAEAGNLSGWGLHNEANGYEAEFIKRIVSDVACKLGNKTLHVAK-HP 179

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ S ++ I S L     +   VGI GI GIGKTTIA A+++ +   FEGS F+ ++++
Sbjct: 180 VGIYSRVQGIISLLKGAKPDVGIVGIHGIAGIGKTTIAKAVFNKLYFGFEGSSFLSDVKE 239

Query: 222 ESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
            S+K  GL  +                      +N  + RL R K+L+VF D+   +Q++
Sbjct: 240 ISDKPNGLVELQERLLHDILKPRVWKVSNVYEGMNLIKERLHRKKILVVFDDVDKREQLE 299

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G    F  GS +I+ T++  LL       V  ++  KEL  + SL LFS +AF + H
Sbjct: 300 ALMGERCWFGAGSIIIVVTKNKHLLTE---VGVDGMYHAKELDRDQSLELFSLHAFRETH 356

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           PA  + ELS  V+ Y  G+PLALQ+LGS+L    +  WE  +   + +PH DIQ  L+VS
Sbjct: 357 PAKDYEELSGKVVDYCKGLPLALQILGSHLSIRDKAGWEIDIAHWRNIPHDDIQGKLRVS 416

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA--KIGISRLVGKSLVTISN-NK 437
           +D L+ +   IFLD AC+F G D+  V + + A R+    ++    L+G+SL+TI   N 
Sbjct: 417 FDALNVDTSEIFLDIACYFVGGDKEYVADIVGA-RYDCHPEVAFRTLIGRSLITIDTWNS 475

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
           + MHD L++MG EI+RQ S   PG  SR+  P+D Y VL++
Sbjct: 476 LWMHDTLRKMGREIIRQRSRNHPGNCSRIVLPKDAYNVLSK 516


>gi|82542035|gb|ABB82025.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 735

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 208/539 (38%), Positives = 293/539 (54%), Gaps = 70/539 (12%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL +AL +  I  F DD  L RG EIS  L  AI+ SK
Sbjct: 48  PEGAYDVFLSFRGEDTRKTFTDHLYSALVQAGIRAFRDDDDLPRGEEISDHLLRAIQESK 107

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
           ISIV+FS+GYASSRWCLNELV+ILE KN K GQIV+P+FY +DPSD       +  +   
Sbjct: 108 ISIVVFSKGYASSRWCLNELVEILECKNRKTGQIVLPIFYHIDPSDVRKQNGSFAEAFAN 167

Query: 123 ------------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLF---PS 155
                                   GW         E+  I+  + D+  KL   +   P 
Sbjct: 168 NEERFEEKLVKEWRKALEEAGNLSGWNLNHMANGHEAKFIKEIIKDVLNKLDPKYFYVP- 226

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
              + LVG++ +   I   L + +     VGI G+ GIGKTTIA  +++ +   FEGS F
Sbjct: 227 ---EHLVGMDRLAHNIFDFLSTATDHVRIVGIHGMPGIGKTTIAKVVFNQLCYGFEGSCF 283

Query: 216 MQNIRDESEKVGGLANIHLNFERRRLS----------RMKVLI-----------VFYDLT 254
           + NI + S++  GLA +        L           R KVLI           V  D+ 
Sbjct: 284 LSNINETSKQFNGLALLQRQLLHDILKQDAANINCDDRGKVLIKERLRRKRVVVVADDVA 343

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
              Q+  L+G    F PGS VIITTRD  LL+          + ++EL+ ++SL LFS +
Sbjct: 344 HQDQLKALMGERSWFGPGSIVIITTRDSNLLRE-----ADQTYPIEELTPDESLQLFSWH 398

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           A     P   ++ELS  V+ Y  G+PLAL+V+G+ L G + + W+S ++KL+R+P+ DIQ
Sbjct: 399 ALRDTKPTEDYIELSKDVVDYCGGLPLALEVMGACLSGKNRDGWKSVIDKLRRIPNRDIQ 458

Query: 375 KVLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVT 432
             L++S+D LD EE QN FLD ACFF    +  V   L A C ++ ++ +  L  +SL+ 
Sbjct: 459 GKLRISFDSLDGEELQNAFLDIACFFIDRRKEYVAKVLGARCGYNPEVDLQTLHERSLIK 518

Query: 433 ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD 489
           +    +TMHDLL++MG E+VR+ S K+PGKR+R+W+  D + VL +   T +  G+ LD
Sbjct: 519 VLGETVTMHDLLRDMGREVVRESSPKEPGKRTRIWNQGDAWNVLEQQKGTDVVEGLALD 577


>gi|27764544|gb|AAO23074.1| R 10 protein [Glycine max]
          Length = 901

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 252/730 (34%), Positives = 364/730 (49%), Gaps = 121/730 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+++ S   I    +DVFL+FRG D R+ F  +L  ALC + I TF D+K L+RG EI+
Sbjct: 1   MAATTRSRASI----YDVFLNFRGGDTRYGFTGNLYRALCDKGIHTFFDEKKLHRGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
           P+L  AI+ S+I+I + S+ YASS +CL+ELV IL  K++ G +V+PVFY VDPSD  + 
Sbjct: 57  PALLKAIQESRIAITVLSKNYASSSFCLDELVTILHCKSE-GLLVIPVFYNVDPSDVRHQ 115

Query: 119 -------------------------------CPSLGWMGIFDIPTSESVLIEGNVNDISK 147
                                             L      D    E   I+  V  +S+
Sbjct: 116 KGSYGVEMAKHQKRFKAKKEKLQKWRIALKQVADLCGYHFKDGDAYEYKFIQSIVEQVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           +++   P    D  VG+ S + E+   L  GS +  + +GI G+GG+GKTT+A A+Y+ I
Sbjct: 176 EINRA-PLHVADYPVGLGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I L       +  + RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  ++GR D F PGSRVIITTRD  LLK H   R    +EVK L+ + 
Sbjct: 295 LLILDDVDKREQLKAIVGRPDWFGPGSRVIITTRDKHLLKYHEVERT---YEVKVLNQSA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L   NAF +      + ++ N V+ YA+G+PLAL+V+GS L G +  EWESA+   K
Sbjct: 352 ALQLLKWNAFKREKIDPSYEDVLNRVVTYASGLPLALEVIGSNLFGKTVAEWESAMEHYK 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK---IGIS 423
           R+P  +I ++LKVS+D L +E++N+FLD AC F+G     V + L A   + K   IG+ 
Sbjct: 412 RIPSDEILEILKVSFDALGEEQKNVFLDIACCFRGYKWTEVDDILRALYGNCKKHHIGV- 470

Query: 424 RLVGKSLVTIS---NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN- 479
            LV KSL+ ++    + + MHDL+Q+M  EI R+ S ++PGK  RLW P+DI QV  +N 
Sbjct: 471 -LVEKSLIKLNCYGTDTVEMHDLIQDMAREIERKRSPQEPGKCKRLWLPKDIIQVFKDNT 529

Query: 480 -TSLPTGINLDS----------LKELYLGGCSNLK--------------RFPE------- 507
            TS    I LDS            E       NLK               FPE       
Sbjct: 530 GTSKIEIICLDSSISDKEETVEWNENAFMKMENLKILIIRNDKFSKGPNYFPEGLRVLEW 589

Query: 508 ----ISCNIEDLDLKETAIEELPSSI---------GNLSRLVDLDLTNCSGLKSVSSRLC 554
                +C   +       I +LP S               L  L   NC  L  +   + 
Sbjct: 590 HRYPSNCLPSNFHPNNLVICKLPDSCMTSFEFHGPSKFGHLTVLKFDNCKFLTQIPD-VS 648

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRLQN 613
           +L +LR L+   C  L  + + IG L  L+ L+       +  P     L+ L  L L  
Sbjct: 649 DLPNLRELSFEECESLVAVDDSIGFLNKLKKLSAYGCSKLKSFPPL--NLTSLQTLELSQ 706

Query: 614 CKRLQSLPEL 623
           C  L+  PE+
Sbjct: 707 CSSLEYFPEI 716



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 16/154 (10%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDL-DLKETAIEELPS------SIGNLSRLVDLDLTNC 543
           L  L    C  L + P++S    DL +L+E + EE  S      SIG L++L  L    C
Sbjct: 630 LTVLKFDNCKFLTQIPDVS----DLPNLRELSFEECESLVAVDDSIGFLNKLKKLSAYGC 685

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           S LKS      NL SL+ L LS C  LE  PE IG +E++++L L     +++  S + L
Sbjct: 686 SKLKSFPP--LNLTSLQTLELSQCSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQNL 743

Query: 604 SKLSDLRLQNCKRLQ---SLPELPCGSSIHARHC 634
             L  L L++C  ++   SL  +P     H  +C
Sbjct: 744 IGLRWLTLRSCGIVKLPCSLAMMPELFEFHMEYC 777



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 37/197 (18%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           +NL SL+ L L  CS+L+ FPEI     NI+ L L    I+EL  S  NL  L  L L +
Sbjct: 694 LNLTSLQTLELSQCSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQNLIGLRWLTLRS 753

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE-----IGNLES--------------- 582
           C G+  +   L  +  L   ++  C + + +  E     +G++ S               
Sbjct: 754 C-GIVKLPCSLAMMPELFEFHMEYCNRWQWVESEEGEKKVGSIPSSKAHRFSAKDCNLCD 812

Query: 583 ------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
                       + +LNL+  +F  +P   K+L  L  L + +C+ LQ +  LP      
Sbjct: 813 DFFLTGFKTFARVGHLNLSGNNFTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYF 872

Query: 630 HARHCTSLKTLSNSSTL 646
            AR+C SL + S +  L
Sbjct: 873 DARNCASLTSSSKNMLL 889



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L+ LK+L   GCS LK FP +                      NL+ L  L+L+ CS L+
Sbjct: 674 LNKLKKLSAYGCSKLKSFPPL----------------------NLTSLQTLELSQCSSLE 711

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
                +  +++++ L L G L +++L     NL  L +L L      K+P S+  + +L 
Sbjct: 712 YFPEIIGEMENIKHLFLYG-LPIKELSFSFQNLIGLRWLTLRSCGIVKLPCSLAMMPELF 770

Query: 608 DLRLQNCKRLQ 618
           +  ++ C R Q
Sbjct: 771 EFHMEYCNRWQ 781


>gi|357468821|ref|XP_003604695.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355505750|gb|AES86892.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1121

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 248/710 (34%), Positives = 364/710 (51%), Gaps = 117/710 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+ F  +L  AL  + I TFIDD+ L RG++I+PSL  AI+ SKI I+
Sbjct: 16  YDVFLSFRGTDTRYGFTGNLYEALRVKGIHTFIDDRELQRGDQITPSLLKAIQESKIVII 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-CPSLG---------- 123
           +FS  YASS +CL+ELV I+    + G +V+P+FY V+PS   Y   S G          
Sbjct: 76  VFSNHYASSSFCLDELVHIIHCSKENGCLVLPIFYGVEPSHVRYQTGSYGEALAEHEEAR 135

Query: 124 --------------W-MGI----------FDIPTS-ESVLIEGNVNDISKKLSDLFPSDN 157
                         W M +          F+  T  E   I+  V  +S K++   P   
Sbjct: 136 KKEKYKDNMEKLQKWEMALKQAANLSGYHFNARTGYEYEFIQMIVTYVSNKINHT-PLHV 194

Query: 158 KDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
            D  VG+E  + ++ S L  GS +    +GI+G GG+GKTT+  AIY+ I+  FE   F+
Sbjct: 195 ADYPVGLEPRVLKLYSLLDIGSNDKVQMLGIYGTGGMGKTTLGKAIYNFIAHQFECLCFL 254

Query: 217 QNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVLIVFYDLTDL 256
            N+R+ S KV GL  +                     +   ++RL R KVL++  D+  L
Sbjct: 255 PNVRENSTKVDGLEYLQSKVLFKTIGLEIRFGDISEGIPIIKKRLQRKKVLLILDDIDKL 314

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           KQ+ +L G  D F  GSRVIITTRD  LLK H    +   +EV  L+ N++L L    AF
Sbjct: 315 KQLQVLAGEPDWFGLGSRVIITTRDKHLLKCHG---IDITYEVDGLNENEALQLLRWKAF 371

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
             +     +  + N V+ YA+G+PLAL+V+GS L G   E+W+S +++ +R+P+ +IQK+
Sbjct: 372 KNSTVNPSYEGILNRVVTYASGLPLALEVVGSNLFGKDIEKWKSLLDEYERIPNKEIQKI 431

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           L VS++ L + EQ++FLD AC FKG      +Y++      C    K  I +LV KSL+ 
Sbjct: 432 LIVSFNNLGEYEQSVFLDIACCFKGYSLDEVEYILCAHYGYC---MKYHIGKLVDKSLIK 488

Query: 433 ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG----INL 488
           I  +++T+HDL++ MG EIVR+ES+ +PGKR+RLW  EDI +VL ENT   TG    I+L
Sbjct: 489 IQLSRVTLHDLIEIMGKEIVRKESVIEPGKRTRLWFCEDIVRVLKENTG--TGNTEIIHL 546

Query: 489 D--SLKELYLGGCSNLKR--------------------FPEISCNIEDLDLKETAIEELP 526
           D  S+KE+        K+                    FP     +  L+ +    + LP
Sbjct: 547 DFSSIKEVVDWNGKAFKKMKILKTLVIKSGHFSKAPVYFPS---TLRVLEWQRYPSQCLP 603

Query: 527 SSIGN----LSRLVDLDLTN--------CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           SSI N    +S   D    N        C  L       C L +L +++   C  L  + 
Sbjct: 604 SSIFNKASKISLFSDYKFENLKILKFDYCEYLIDTPDVSC-LPNLEKISFQSCKNLVTIH 662

Query: 575 EEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
              G L  L++L++         P    +L  L +L++  CK LQS P++
Sbjct: 663 NSTGFLNKLKFLSVEGCCKLRYFPPL--ELISLENLQISRCKSLQSFPKI 710



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVD 537
           SL +    ++LK L    C  L   P++SC  N+E +  +    +  + +S G L++L  
Sbjct: 614 SLFSDYKFENLKILKFDYCEYLIDTPDVSCLPNLEKISFQSCKNLVTIHNSTGFLNKLKF 673

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L +  C  L+        L SL  L +S C  L+  P+ +G +E+L+YL++     +  P
Sbjct: 674 LSVEGCCKLRYFPP--LELISLENLQISRCKSLQSFPKILGKIENLKYLSIYGTSIKGFP 731

Query: 598 SSMKQLSKLSDLRLQ 612
            S + L+ L ++ ++
Sbjct: 732 VSFQNLTGLCNISIE 746


>gi|357499539|ref|XP_003620058.1| Resistance protein [Medicago truncatula]
 gi|355495073|gb|AES76276.1| Resistance protein [Medicago truncatula]
          Length = 1907

 Score =  324 bits (831), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 232/647 (35%), Positives = 349/647 (53%), Gaps = 73/647 (11%)

Query: 24   GKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGYAS 82
            G D RH F  +L  AL  + I TFIDD  L RG+EI+PSL  AI+ S+I I +FS  YAS
Sbjct: 767  GTDTRHGFTGNLYKALTDKGIHTFIDDNDLQRGDEITPSLLKAIDESRIFIPVFSLNYAS 826

Query: 83   SRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL--------------- 122
            S +CL+ELV I+      G++V+PVF+ V+P++       Y  +L               
Sbjct: 827  SSFCLDELVHIIHCYETKGRLVLPVFFGVEPTNVRHHKGSYGKALAEHEKRFQNDPKNME 886

Query: 123  ---GWM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESII 168
               GW           G  D P   E   IE  V  IS K+S   P    +  VG++S +
Sbjct: 887  RLQGWKEALSQAANLSGYHDSPPRYEYKFIEEIVKYISNKISRQ-PLHVANYPVGLQSQV 945

Query: 169  KEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK-- 225
            + ++S L +GS +  + VGI+GIGG+GK+T+A AIY+ ++  FEG  F+ N+R  S K  
Sbjct: 946  QRVKSILDNGSDDGVHMVGIFGIGGLGKSTLARAIYNLVADQFEGLCFLHNVRMNSAKNN 1005

Query: 226  ------------VGGLANI-HLN----FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
                         G   N+ H++      + RL R K+L++  D+  L Q+  L G LD 
Sbjct: 1006 LEHLQEKLLFKTTGSEINLDHVSDGIPIIKERLCRKKILLILDDVDKLDQLQALAGGLDW 1065

Query: 269  FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
            F PGSRVIITTRD  LL +H    +   + VK L+  ++L L    AF  ++  + + E+
Sbjct: 1066 FGPGSRVIITTRDKHLLDHHG---IEKTYAVKGLNGTEALELLRWMAFKSDNVPSRYKEI 1122

Query: 329  SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
             +  + Y +G+PL ++++GS L G + EEW+  ++   R+P+ +IQK+L+VSYD L++EE
Sbjct: 1123 LSRAVSYVSGLPLVIEIVGSNLFGKNIEEWKYILDGYDRIPNKEIQKILRVSYDALEEEE 1182

Query: 389  QNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNNK--ITMHDLLQ 445
            Q++FLD AC FKG+        L A    S    ++ L  KSL+        +T+HDL++
Sbjct: 1183 QSVFLDIACCFKGHGWEDAKYMLHAHYGHSITHHLAVLAEKSLINQYREYGCVTLHDLIE 1242

Query: 446  EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRF 505
            +MG E+VRQES K+PG+RSRL   +DI +VL ENT         ++K L L  C  L   
Sbjct: 1243 DMGKEVVRQESTKEPGERSRLCCQDDITRVLRENTK------FQNMKILTLDDCEYLTHI 1296

Query: 506  PEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRL 562
            P++S   N+E L  +    +  + +SIG+LS+L  L +T    LK        L SL+ L
Sbjct: 1297 PDVSSLSNLEKLSFEHCKNLITIHNSIGHLSKLERLSVTGYRKLKHFPP--LGLASLKEL 1354

Query: 563  NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
            NL G   LE  PE +  +  ++ +++      K+P S + LS+L + 
Sbjct: 1355 NLMGGSCLENFPELLCKMAHIKEIDIFYISIGKLPFSFQNLSELDEF 1401



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 169/539 (31%), Positives = 261/539 (48%), Gaps = 108/539 (20%)

Query: 185 VGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE-------------KVGGLAN 231
           VGI+GIGG+GK+T+A AIY+ ++  FEG  F+ ++R+ S              K  G + 
Sbjct: 2   VGIFGIGGLGKSTLARAIYNFVADQFEGLCFLHDVRENSAQNDLKHLQEKLLLKTTG-SK 60

Query: 232 IHLN-------FERRRLSRMKVLIVFYDLTDLKQIDLLIGRL------------------ 266
           I L+       F + RL R K+L++  D+ D KQ+  L G L                  
Sbjct: 61  IKLDHVCEGIPFIKERLCRKKILLILDDVDDRKQLHALAGGLALVEKAKLVTEKMKFLTN 120

Query: 267 --------------------------------DGFVPGSRVIITTRDVQLLKNHRGSRVG 294
                                           D F PGSRVIITTR+  LL +HR   + 
Sbjct: 121 SMVAKFSDGIREGFHVFPHKISLTNFCFFSSVDWFGPGSRVIITTRNKHLLASHR---IE 177

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
             + V+ L+  D+L L    AF  ++  +G+ ++ N  + YA+G+PL L+V+GS L G +
Sbjct: 178 KTYPVEGLNGIDALELLRWMAFKNDNVPSGYEDILNRAVAYASGLPLVLEVMGSNLFGKN 237

Query: 355 EEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL--- 411
            EEW++ ++   R+P+ +IQK+L+VSYD L++EEQ++FLD AC  KG     V N L   
Sbjct: 238 IEEWKNTLDGYDRIPNKEIQKILRVSYDALEEEEQSVFLDIACCLKGYRLTEVENILHSH 297

Query: 412 -DACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE 470
            D C       +  L  KSL+  +   +T+H+L+++MG E+VRQESIK+PG+RSRL   +
Sbjct: 298 YDHC---ITHHLRVLAEKSLIDTNYCYVTLHNLIEDMGKEVVRQESIKEPGERSRLCCHD 354

Query: 471 DIYQVLNENTSLP----TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP 526
           DI  VL ENT         +N  S++ +        K+   +   I +       ++ LP
Sbjct: 355 DIVNVLKENTGTSKIQMMYMNFHSMESIIDQKGMAFKKMTRLKTLIIENGHCSKGLKYLP 414

Query: 527 SSIGNLS-------------------RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
           SS+  L                     +  L L +C  L  +   +  L +L +L+   C
Sbjct: 415 SSLKALKWEGCLSKSLSSSILSKKFPDMTVLTLDHCKYLTHIPD-VSGLSNLEKLSFEYC 473

Query: 568 LKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             L  +   IG+L  LE L+    ++F++ P     L+ L +L L+ C+ L S PEL C
Sbjct: 474 DNLITIHNSIGHLNKLERLSAFGCREFKRFPPL--GLASLKELNLRYCESLDSFPELLC 530



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 12/164 (7%)

Query: 486  INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
            + L SLKEL L G S L+ FPE+ C   +I+++D+   +I +LP S  NLS L +  ++ 
Sbjct: 1346 LGLASLKELNLMGGSCLENFPELLCKMAHIKEIDIFYISIGKLPFSFQNLSELDEFTVS- 1404

Query: 543  CSGLKSVSSRLCNLKS-----LRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
              G+         + S     + +L+L  C L  E LP  +    ++ YL+L+  DF+ +
Sbjct: 1405 -YGILRFPEHNDKMYSIVFSNMTKLSLFDCYLSDECLPILLKWCVNMTYLDLSYSDFKIL 1463

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
            P  + +   L ++ ++ CK L+ +  +P    S++A  C SL +
Sbjct: 1464 PECLSESHHLVEIIVRYCKSLEEIRGIPPNLGSLYAYECKSLSS 1507



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 27/139 (19%)

Query: 411 LDACRFSAKI----GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRL 466
           LD C++   I    G+S L   S     +N IT+H+ +    G + + E +   G R   
Sbjct: 447 LDHCKYLTHIPDVSGLSNLEKLSF-EYCDNLITIHNSI----GHLNKLERLSAFGCREFK 501

Query: 467 WHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIE 523
             P             P G  L SLKEL L  C +L  FPE+ C   NI+++ L+ T+I 
Sbjct: 502 RFP-------------PLG--LASLKELNLRYCESLDSFPELLCKMTNIDNIWLQHTSIG 546

Query: 524 ELPSSIGNLSRLVDLDLTN 542
           ELP S  NLS L +L + N
Sbjct: 547 ELPFSFQNLSELDELSVVN 565



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 5/123 (4%)

Query: 494 LYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L L  C  L   P++S   N+E L  +    +  + +SIG+L++L  L    C   K   
Sbjct: 445 LTLDHCKYLTHIPDVSGLSNLEKLSFEYCDNLITIHNSIGHLNKLERLSAFGCREFKRFP 504

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
                L SL+ LNL  C  L+  PE +  + +++ + L      ++P S + LS+L +L 
Sbjct: 505 P--LGLASLKELNLRYCESLDSFPELLCKMTNIDNIWLQHTSIGELPFSFQNLSELDELS 562

Query: 611 LQN 613
           + N
Sbjct: 563 VVN 565


>gi|357499913|ref|XP_003620245.1| Resistance protein [Medicago truncatula]
 gi|355495260|gb|AES76463.1| Resistance protein [Medicago truncatula]
          Length = 1607

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 255/696 (36%), Positives = 366/696 (52%), Gaps = 85/696 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D RH F  +L  AL  + + TF+DDK L +G EI+PSL  AIE S ++I
Sbjct: 9   KYDVFLSFRGEDTRHGFTGYLKKALDDKGVRTFMDDKELRKGEEITPSLLKAIEQSMMAI 68

Query: 74  VIFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSDAGYCP-SLG-------- 123
           V+ SE YASS +CL EL KIL++ K+  G+ V PVFY VDPSD      S G        
Sbjct: 69  VVLSENYASSSFCLQELSKILDTMKDMVGRSVFPVFYKVDPSDVRKLKRSFGEGMDKHKA 128

Query: 124 ------W----MGIFDIP-------TSESVLIEGNVNDISKKLSDL-FPSDNKDQLVGVE 165
                 W      + D+        T E + I   V  +   +  L  P    D L+G+E
Sbjct: 129 NSNLDKWKVSLHQVTDLSGFHYKGDTPEHMFIGDIVEQVLGNIEPLALPVG--DYLIGLE 186

Query: 166 SIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
              + + S L  GS +  + VGI G+GGIGKTT+A ++Y+ I+  F+ S F++N+R+  E
Sbjct: 187 HQKQHLTSLLNIGSDDTVHMVGIHGMGGIGKTTLALSVYNLIAHEFDASCFLENVRENHE 246

Query: 225 KVG--GLANIHLN-----------------FERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
           K G   L NI L+                    +RL + K+L++  D+ + +Q+  L G+
Sbjct: 247 KHGLPYLQNIILSKVVGEKNALTGVRQGISILEQRLRQKKLLLILDDVNEQEQLKALAGK 306

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH-PAAG 324
              F P SR+IITTRD +LL  H    V H +EV+ L+  D+  L    AF     P+  
Sbjct: 307 HKWFGPSSRIIITTRDKKLLTCHG---VEHTYEVRGLNAKDAFELVRWKAFKDEFSPSDE 363

Query: 325 FLELSNI-----VIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            + L+ +     V+ YA+G PLAL+V+GS+    + E+ + A+++ +++PH  IQ  L++
Sbjct: 364 NVSLAQLHVIERVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQTTLQI 423

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFS-AKIGISRLVGKSLVTISN-NK 437
           S+D L+DEE+ +FLD AC FKG     V   L A      K  I+ LV KSL+ I+    
Sbjct: 424 SFDALEDEEKFVFLDIACCFKGCKLTRVDEILHAHHGEIVKDHINVLVEKSLIKINEFGN 483

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLKELY 495
           +T+HDL+++MG EIVRQES +DPGKR+RLW   DI QVL EN  TS    I  D    + 
Sbjct: 484 VTLHDLVEDMGKEIVRQESPQDPGKRTRLWFSNDIMQVLEENTGTSQIEIIRFDCWTTVA 543

Query: 496 LGGCSNLKRFPEISCNI-EDLDLKETAIEELPSSIGNLS-------RLVDLDLTNCSGLK 547
             G    K+   +   I  D    + + + LP+S+  L         LV L L N     
Sbjct: 544 WDG-EAFKKMENLKTLIFSDYVFFKKSPKHLPNSLRVLECHNPSSDFLVALSLLNFPTK- 601

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKL 606
                  N +++R LNL G   L ++P  I  L +LE L++        I  S+  L KL
Sbjct: 602 -------NFQNMRVLNLEGGSGLVQIP-NISGLSNLEKLSIKNCWKLIAIDKSVGFLGKL 653

Query: 607 SDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
             LRL NC  +QS+P L   S   +H   C SL++ 
Sbjct: 654 KILRLINCIEIQSIPPLMLASLVELHLSGCNSLESF 689



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 18/175 (10%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCN-IEDLDLKET-AIEELPSSI-GNLSR 534
           EN  L     L  LK L + GC  L   P +  N +E LDL +  ++E  P  +   L +
Sbjct: 734 ENFPLVVDAFLGKLKTLNVKGCCKLTSIPPLKLNSLETLDLSQCYSLENFPLVVDAFLGK 793

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----EEIGNLESLEYLNLAE 590
           L  L++ +C  LKS+      L SL  LNLS C  LE  P    E +G L++L +     
Sbjct: 794 LKTLNVESCHNLKSIQP--LKLDSLIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKC-- 849

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-----SSIHARHCTSLKTL 640
            + + IP    +L+ L  L   +C RL+S P +  G      ++  R C +LK++
Sbjct: 850 HNLKSIPPL--KLNSLETLDFSSCHRLESFPPVVDGFLGKLKTLLVRKCYNLKSI 902



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 11/171 (6%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED-LDLKETAIEELPSSIG--NLSR 534
           E  S+P  + L SL EL+L GC++L+ FP +     D L        ++  SI    L+ 
Sbjct: 663 EIQSIPP-LMLASLVELHLSGCNSLESFPPVLDGFGDKLKTMNVIYCKMLRSIPPLKLNS 721

Query: 535 LVDLDLTNCSGLKSVSSRL-CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
           L  LDL+ C  L++    +   L  L+ LN+ GC KL  +P     L SLE L+L++   
Sbjct: 722 LETLDLSQCYSLENFPLVVDAFLGKLKTLNVKGCCKLTSIPPL--KLNSLETLDLSQCYS 779

Query: 593 FEKIPSSMKQ-LSKLSDLRLQNCKRLQSLPELPCGSSIHAR--HCTSLKTL 640
            E  P  +   L KL  L +++C  L+S+  L   S I+    HC +L+  
Sbjct: 780 LENFPLVVDAFLGKLKTLNVESCHNLKSIQPLKLDSLIYLNLSHCYNLENF 830



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCN-IEDLDLKET-AIEELPSSI-GNLSRLVDLDLTNCS 544
            L  LK L +  C NLK  P +  + +E LDL    ++E  P  + G L +L  L++  C 
Sbjct: 885  LGKLKTLLVRKCYNLKSIPPLKLDSLEKLDLSCCCSLESFPCVVDGLLDKLKFLNIECCI 944

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+++  RL  L SL   NLS C  LE  PE +G + ++  L   +   ++IP   K L+
Sbjct: 945  MLRNIP-RL-RLTSLEYFNLSCCYSLESFPEILGEMRNIPGLLKDDTPIKEIPFPFKTLT 1002

Query: 605  K 605
            +
Sbjct: 1003 Q 1003



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 34/168 (20%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI--------------SCN------------IEDLDLKE 519
           + LDSL  L L  C NL+ FP +               C+            +E LD   
Sbjct: 811 LKLDSLIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKCHNLKSIPPLKLNSLETLDFSS 870

Query: 520 TA-IEELPSSI-GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
              +E  P  + G L +L  L +  C  LKS+      L SL +L+LS C  LE  P  +
Sbjct: 871 CHRLESFPPVVDGFLGKLKTLLVRKCYNLKSIPP--LKLDSLEKLDLSCCCSLESFPCVV 928

Query: 578 -GNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            G L+ L++LN+        IP    +L+ L    L  C  L+S PE+
Sbjct: 929 DGLLDKLKFLNIECCIMLRNIPRL--RLTSLEYFNLSCCYSLESFPEI 974


>gi|227438165|gb|ACP30572.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1184

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 229/730 (31%), Positives = 358/730 (49%), Gaps = 130/730 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           HDVF SFRG+DVR +F SH+     R+ I  FID+++ RG  I P L  AI GSKI+I++
Sbjct: 60  HDVFPSFRGEDVRRDFFSHIQREFERKGITPFIDNEIKRGESIGPELIRAIRGSKIAIIL 119

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------A 116
            S  YASS+WCL+ELV+I++ + ++GQ V+ +F+ VDPSD                   A
Sbjct: 120 LSRNYASSKWCLDELVEIMKCREEFGQTVMAIFHKVDPSDVKKLTGDFGKFFKKTCAGKA 179

Query: 117 GYCPSLGWMGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
             C       +  + T          +E+ +I+    D S  L++  PS++ D LVG+ +
Sbjct: 180 KDCIERWRQALAKVATIAGYHSSNWDNEADMIKKIATDTSNMLNNFTPSNDFDGLVGMGA 239

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
             + ++S L  GS E   +GIWG  GIGKTTIA   ++ +S+ F+ S FM +++  S ++
Sbjct: 240 HWENLKSILCLGSDEVRMIGIWGPPGIGKTTIARVAFNQLSNSFQLSVFMDDLKANSSRL 299

Query: 227 GG----------------------LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                                   +   H      RL   KVL+V   +    Q+D +  
Sbjct: 300 CSDDYSVKLQLQQQFMSQITDHKDMVVSHFGVVSNRLRDKKVLVVLDGVNRSVQLDAMAK 359

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
               F PGSR+IITT+D +L + H    + H++EV   + +++L +F    FGQN P  G
Sbjct: 360 ETWWFGPGSRIIITTQDQKLFRAHG---INHIYEVNLPTNDEALQIFCTYCFGQNFPKYG 416

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F EL+  V   +  +PL L+V+GSYL+GMS+E+W +++ +L+     DIQ +LK SYD L
Sbjct: 417 FEELAREVTSLSGELPLGLRVMGSYLRGMSKEDWTNSLPRLRDSLDTDIQSILKFSYDAL 476

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DDE++++FL  ACFF     + +   L       +  +  L  KSL++I + +I MH LL
Sbjct: 477 DDEDKDLFLHIACFFSSEQIHKMEEHLAKRFLYVRQRLKVLAEKSLISIDSGRIRMHSLL 536

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN---ENTSLPTGINLD--------SLKE 493
           +++G EIV ++SI +PG+R  L+   DI +VL      +    GI  +         + E
Sbjct: 537 EKLGREIVCKQSIHEPGQRQFLYDKRDICEVLTGGATGSKSVIGIKFEYYRIREEIDISE 596

Query: 494 LYLGGCSNLKRFPEISCNIED-----------------LDLKETAIEELPSSIGNLSRLV 536
               G SNL+ F ++ C   D                 L+ +   +  LP ++ NL  LV
Sbjct: 597 KAFEGMSNLQ-FLKV-CGFTDALQITGGLNYLSHKLRLLEWRHFPMTCLPCTV-NLEFLV 653

Query: 537 DL-----------------------------------DLTNCSGLKSV----SSRLCNLK 557
           +L                                   DL+  + L+ +     S L  L 
Sbjct: 654 ELVMPYSKLEKLWEGCKPLRCLKWMDLGYSVNLKELPDLSTATNLEKLYLYDCSSLVKLP 713

Query: 558 S-----LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRL 611
           S     L +LN+ GC  L + P  IGN  +L+ L+L+   +  ++PS +   + L  L L
Sbjct: 714 SMSGNSLEKLNIGGCSSLVEFPSFIGNAVNLQELDLSSFPNLLELPSYVGNATNLEYLDL 773

Query: 612 QNCKRLQSLP 621
           +NC  +  LP
Sbjct: 774 RNCLNMVELP 783



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 25/165 (15%)

Query: 482 LPTGINLDSLKELYLGGCS--NLKRFPEI--SCNIEDLDLKE-TAIEELPSSIGNLSRLV 536
           LPT INL+ L EL + GCS  +L  F  I  + N+ +L++     + E+PS IGN + L 
Sbjct: 806 LPTNINLEYLNELDIAGCSSLDLGDFSTIGNAVNLRELNISSLPQLLEVPSFIGNATNLE 865

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL---------------- 580
           +L L++CS L  +   + NL+ LR L L GC++LE LP  I                   
Sbjct: 866 NLVLSSCSKLVELPLFIGNLQKLRWLRLEGCIRLEVLPTNINLESLLELNLSDCSMLKSF 925

Query: 581 ----ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                +LE LNL     E++P S++    L +L +   + L+  P
Sbjct: 926 PQISTNLEKLNLRGTAIEQVPPSIRSWPHLKELHMSYFENLKEFP 970



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 34/182 (18%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT INL+SL EL L  CS LK FP+IS N+E L+L+ TAIE++P SI +   L +L ++
Sbjct: 902  LPTNINLESLLELNLSDCSMLKSFPQISTNLEKLNLRGTAIEQVPPSIRSWPHLKELHMS 961

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                                         E L E    LE +  L+L + + +++P  +K
Sbjct: 962  ---------------------------YFENLKEFPHALERITSLSLTDTEIQEVPPLVK 994

Query: 602  QLSKLSDLRLQNCKRLQSLPELPCGS-SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            Q+S+L+   L  C++L  LP +   + SI+A  C SL+ L  S +   R         F+
Sbjct: 995  QISRLNRFFLSGCRKLVRLPPISESTHSIYANDCDSLEILECSFSDQIRR------LTFA 1048

Query: 661  NC 662
            NC
Sbjct: 1049 NC 1050



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 31/163 (19%)

Query: 489 DSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           +SL++L +GGCS+L  FP     + N+++LDL     + ELPS +GN + L  LDL NC 
Sbjct: 718 NSLEKLNIGGCSSLVEFPSFIGNAVNLQELDLSSFPNLLELPSYVGNATNLEYLDLRNCL 777

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE------KDFEKI-- 596
            +  +   L NLK L+RL L GC KLE LP  I NLE L  L++A        DF  I  
Sbjct: 778 NMVELPLSLRNLKKLKRLRLKGCSKLEVLPTNI-NLEYLNELDIAGCSSLDLGDFSTIGN 836

Query: 597 ------------------PSSMKQLSKLSDLRLQNCKRLQSLP 621
                             PS +   + L +L L +C +L  LP
Sbjct: 837 AVNLRELNISSLPQLLEVPSFIGNATNLENLVLSSCSKLVELP 879


>gi|163914239|dbj|BAF95889.1| N-like protein [Nicotiana tabacum]
          Length = 1169

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 239/692 (34%), Positives = 361/692 (52%), Gaps = 92/692 (13%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGS 69
            P   + VFLSFRG+D R  F  HL   L    I TF DDK L  G  IS  L  AIE S
Sbjct: 13  FPRWNYKVFLSFRGEDTRKTFTGHLFKGLENNGIFTFQDDKRLEHGASISDELLKAIEQS 72

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS--------------- 114
           ++++V+FS+ YA+SRWCL+ELVKI+E K++ GQ V+PVFY VDPS               
Sbjct: 73  QVALVVFSKNYATSRWCLDELVKIMECKDQCGQTVIPVFYDVDPSHVRNQRESFTEAFDK 132

Query: 115 --------DAGYCPSLGWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSD 156
                   D G      W        +          E+  I+  V+ ISK  +    S 
Sbjct: 133 HEPRYRDDDEGRRKLQRWRNALTAAANLKGYDVRDGIEAENIQQIVDQISKLCNSATLSS 192

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTV-GIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
            +D +VG+++ + +++S L  G  +   + GIWG+GG+GKTTIA  I+  +S  FE + F
Sbjct: 193 LRD-VVGIDTHLDKLKSLLKVGINDVRIILGIWGMGGLGKTTIARVIFDILSHQFEAACF 251

Query: 216 MQNIRDESEK--VGGLANIHLN-FERR-----------------RLSRMKVLIVFYDLTD 255
           + +I++  ++  +  L N  L+   RR                 RL   KVLIV  D+  
Sbjct: 252 LADIKENEKRHQLHSLQNTLLSELSRRKDDYVNNKHDGKRMIPDRLFSKKVLIVLDDIDH 311

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
              ++ L G +  F  GSRV++TTR+  L++ +       ++E+  LS ++S+ LF ++A
Sbjct: 312 KDHLEYLAGDIGWFGNGSRVVVTTRNKHLIEKNDV-----IYEMTALSDHESIQLFCQHA 366

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F +  P   F +LS  V+KYANG+PLAL+V GS L  +   EW+SA+ ++K   + +I  
Sbjct: 367 FRKEDPDEHFKKLSLEVVKYANGLPLALKVWGSLLHNLGLTEWKSAIEQMKINSNSEIVD 426

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
            LK+SYDGL+  +Q +FLD ACF +G  +  ++  L++C   A+ G+  L+ KSLV I+ 
Sbjct: 427 KLKISYDGLEPIQQEMFLDIACFLRGEQKAYILQILESCHIGAEYGLRILIDKSLVFITE 486

Query: 436 NK--ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSL 491
           +   I MHDL+Q+MG  IV  +  K+PG+RSRLW  ED  +V+  N  T     I +  L
Sbjct: 487 DYQIIQMHDLIQDMGKYIVNLQ--KNPGERSRLWLNEDFEEVMTNNAGTVAVEAIWVHDL 544

Query: 492 KELYLG--GCSNLK--RFPEISCNIEDLDLKETAI-----------------EELPSSIG 530
             L        N+K  R   I   + D ++ +  I                 E LPS+  
Sbjct: 545 DTLRFNNEAMKNMKKLRILYIDREVYDFNISDEPIEYLSNNLRWFNVDGYPCESLPSTF- 603

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
               LV L+L+  S L+ +     +L SLR +NL+G   L + P+  G + +LEYL+++ 
Sbjct: 604 EPKMLVHLELS-FSSLRYLWMETKHLPSLRTINLTGSESLMRTPDFTG-MPNLEYLDMSF 661

Query: 591 K-DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             + E++  S+   SKL  L L +CK L+  P
Sbjct: 662 CFNLEEVHHSLGCCSKLIGLDLTDCKSLKRFP 693



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 85/131 (64%), Gaps = 5/131 (3%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLK---ETAIEELPSS-IGNLSRLVDLDLT 541
           +N++SL+ L L GCS+L++FPEI   ++ L+++    + I ELPSS     +R+  LDL+
Sbjct: 695 VNVESLEYLDLPGCSSLEKFPEIRGRMK-LEIQIHMRSGIRELPSSSFHYQTRITWLDLS 753

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +   L    S +C L SL +L +SGC KLE LPEEIG+L++LE L  ++    + PSS+ 
Sbjct: 754 DMENLVVFPSSICRLISLVQLFVSGCSKLESLPEEIGDLDNLEVLYASDTLISRPPSSIV 813

Query: 602 QLSKLSDLRLQ 612
           +L+KL+ L  +
Sbjct: 814 RLNKLNSLSFR 824



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 10/151 (6%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSRLVD 537
            P+ I  L SL +L++ GCS L+  PE   ++++L++    +T I   PSSI  L++L  
Sbjct: 761 FPSSICRLISLVQLFVSGCSKLESLPEEIGDLDNLEVLYASDTLISRPPSSIVRLNKLNS 820

Query: 538 LDLTNCSGLKSVSSRLC----NLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKD 592
           L    CSG   V          L SL+ L+LS C  ++  LPE+IG+L SL+ L+L   +
Sbjct: 821 LSF-RCSGDNGVHFEFPPVAEGLLSLKNLDLSYCNLIDGGLPEDIGSLSSLKELDLRGNN 879

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           FE +P S+ QL  L  L L  C+ L  LPEL
Sbjct: 880 FEHLPRSIAQLGALRSLGLSFCQTLIQLPEL 910



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 36/190 (18%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
           +L SL+ + L G  +L R P+ +   N+E LD+     +EE+  S+G  S+L+ LDLT+C
Sbjct: 627 HLPSLRTINLTGSESLMRTPDFTGMPNLEYLDMSFCFNLEEVHHSLGCCSKLIGLDLTDC 686

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE---------------------- 581
             LK       N++SL  L+L GC  LEK PE  G ++                      
Sbjct: 687 KSLKRFPC--VNVESLEYLDLPGCSSLEKFPEIRGRMKLEIQIHMRSGIRELPSSSFHYQ 744

Query: 582 -SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKT 639
             + +L+L++ ++    PSS+ +L  L  L +  C +L+SLPE             +L+ 
Sbjct: 745 TRITWLDLSDMENLVVFPSSICRLISLVQLFVSGCSKLESLPE-------EIGDLDNLEV 797

Query: 640 LSNSSTLLTR 649
           L  S TL++R
Sbjct: 798 LYASDTLISR 807


>gi|186527047|ref|NP_001119319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006746|gb|AED94129.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1191

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 261/748 (34%), Positives = 374/748 (50%), Gaps = 151/748 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG DVR NF+SHL  +L R  I TF+DD +L RG  ISP L +AIE SKI IV
Sbjct: 17  YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIV 76

Query: 75  IFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
           + ++ YASS WCL+ELV I++S KN    +V P+F  VDPSD       Y  S       
Sbjct: 77  VLTKDYASSAWCLDELVHIMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNS 136

Query: 124 --------W---------MGIFDIPT-SESVLIEGNVNDISKKLSDLF---PSDNKDQLV 162
                   W         +  +DI   +E+  I     +I K+L   +   PS      V
Sbjct: 137 HPLNKLKDWREALTKVANISGWDIKNRNEAECIADITREILKRLPCQYLHVPS----YAV 192

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G+ S ++ I S L  GS     + I+G+GGIGKTT+A   ++  S  FEGS F++N R+ 
Sbjct: 193 GLRSRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREY 252

Query: 223 SEKVGGLANIH------------LNFE------RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           S+K  G  ++             + F+      + R    +VL+V  D+ D+ Q++    
Sbjct: 253 SKKPEGRTHLQHQLLSDILRRNDIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAAI 312

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F  GSR+IITTR++ LLK  R       +  KEL  ++SL LFS +AF  + P   
Sbjct: 313 DRDCFGHGSRIIITTRNMHLLKQLRAE---GSYSPKELDGDESLELFSWHAFRTSEPPKE 369

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           FL+ S  V+ Y  G+PLA++VLG++L   S  EWES +  LKR+P+ +IQ  L++S++ L
Sbjct: 370 FLQHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQISFNAL 429

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
             E++++FLD ACFF G D Y V   LD C     I +S L+ + L+TIS N I MHDLL
Sbjct: 430 TIEQKDVFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLL 489

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS------------ 490
           ++MG +IVR+ S K  G+RSRLW   D+  VL +   T+   G++L +            
Sbjct: 490 RDMGRQIVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYFEVEA 549

Query: 491 ---LKEL------YLGGCSNLKRFPE-----------ISC--------NIEDLDLKETAI 522
              ++EL      Y+    + + FP+           + C        ++  LDL+ + +
Sbjct: 550 FAKMQELRLLELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNL 609

Query: 523 EEL-----PSSIGNLSRLVDLD---------------------LTNCSGLKSVSSRLCNL 556
           +       P    N+ + +DL                      L NC  L  V   +  L
Sbjct: 610 KRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGIL 669

Query: 557 -KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE---------------------KDF- 593
            K L  LNLS C++L+ LPEEI  L+SLE L L+                       DF 
Sbjct: 670 DKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFT 729

Query: 594 --EKIPSSMKQLSKLSDLRLQNCKRLQS 619
              +IPS++ QL KL  L L  CK L S
Sbjct: 730 ALREIPSTINQLKKLKRLSLNGCKGLLS 757



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 82/177 (46%), Gaps = 34/177 (19%)

Query: 469 PEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEEL 525
           PE+IY+             L SL+ L+L  CS L+R  +    +E L       TA+ E+
Sbjct: 688 PEEIYK-------------LKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREI 734

Query: 526 PSSIGNLSRLVDLDLTNCSGL-------------KSVS----SRLCNLKSLRRLNLSGC- 567
           PS+I  L +L  L L  C GL              SVS      L  L  +R L+L  C 
Sbjct: 735 PSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPVSLSGLTYMRILSLGYCN 794

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           L  E +PE+IG+L  L  L+L    F  +P+    L  L +L L +C +LQS+  LP
Sbjct: 795 LSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLP 851


>gi|356558721|ref|XP_003547651.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1054

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 240/717 (33%), Positives = 364/717 (50%), Gaps = 98/717 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           + +S + +N  P  K+DVF+SFRG D+R  F+SHL  A  R+ I  F+D  + +G+E+S 
Sbjct: 29  LVTSFTFLNDTPQIKYDVFVSFRGADIRQGFLSHLIEAFSRKHIAAFVDHNILKGDELSE 88

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L  AI GS IS++IFS+ YASSRWCL ELVKI+E + + GQIVVPVFY VDPSD     
Sbjct: 89  TLLGAINGSLISLIIFSQNYASSRWCLLELVKIVECRKRDGQIVVPVFYKVDPSDVRHQK 148

Query: 117 -----GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI 171
                 +    G   +  I T  S L E      S  LS    S   D+   V+ I+K +
Sbjct: 149 GTYGDAFAKHEGKFSLTTIQTWRSALNE------SANLSGFHSSTFGDEAELVKEIVKCV 202

Query: 172 ESQLLSGSTEFNTVGIWGIGG--------------------------IGKTTIASAIYSN 205
             + L+ + + N+ G+ G+G                           IGKTTIA  +Y+ 
Sbjct: 203 WMR-LNHAHQVNSKGLVGVGKRIVHVESLLQLEAADVRIIGIWGIGGIGKTTIAQEVYNK 261

Query: 206 ISSHFEGSYFMQNIRDESEKVGGLA--------------------NIHLNFERRRLSRMK 245
           +   +EG  F+ NIR+ES + G ++                    N    +  RRL RMK
Sbjct: 262 LCFEYEGCCFLANIREESGRHGIISLKKNLFSTLLGEEYLKIDTPNGLPQYVERRLHRMK 321

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VLI+  D+ D +Q++ L  R D F PGSR+I+TTRD Q+L N       +++EV+ L+++
Sbjct: 322 VLIILDDVNDSEQLETL-ARTDWFGPGSRIIVTTRDRQVLAN----EFANIYEVEPLNFD 376

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           +SL LF+ N F Q HP   + ELS  V+ YA G+P  L++LG  L G  +E WES +   
Sbjct: 377 ESLWLFNLNVFKQKHPEIEYYELSKKVVDYAKGIPFVLKLLGHRLHGKEKEIWESQLEG- 435

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKG--NDQYLVMNFLDACRFSAKIGIS 423
           + +    +  ++K+SY+ LD +E+ I +D ACFF G   +   +   L    +S   G+ 
Sbjct: 436 QNVQTKKVHDIIKLSYNDLDQDEKKILMDIACFFYGLRLEVKRIKLLLKDHDYSVASGLE 495

Query: 424 RLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS- 481
           RL  K+L++IS  N ++MHD+++E   +I  QESI+DP  + RL+ P+D+YQVL  N   
Sbjct: 496 RLKDKALISISKENMVSMHDIIKETAWQIAPQESIEDPRSQIRLFDPDDVYQVLKYNKGN 555

Query: 482 ---LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
                  +NL  +K+L L         P++   +  L         + SS   L     L
Sbjct: 556 EAIRSIVVNLLRMKQLRLN--------PQVFTKMNKLHF--LNFYSVWSSSTFLQDPWGL 605

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            L+   GL+S+ + L  L+            LE LP +  + E+L  L+L     +K+  
Sbjct: 606 YLSQ--GLESLPNELRYLRWTH-------YPLESLPSKF-SAENLVELHLPYSRVKKLWL 655

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKTLSNSSTLLTRSSK 652
            +  L  L  L+L +   ++ LP+L   ++   I  R C  L  +  S   L +  K
Sbjct: 656 KVPDLVNLKVLKLHSSAHVKELPDLSTATNLEIIGLRFCVGLTRVHPSVFSLKKLEK 712



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 25/178 (14%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           +L +LK L L   +++K  P++S   N+E + L+    +  +  S+ +L +L  LDL  C
Sbjct: 659 DLVNLKVLKLHSSAHVKELPDLSTATNLEIIGLRFCVGLTRVHPSVFSLKKLEKLDLGGC 718

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLE--------------------KLPEEIGNLESL 583
           + L S+ S + +++SLR L+L GCL+L+                    +LP  IG+   L
Sbjct: 719 TSLTSLRSNI-HMQSLRYLSLHGCLELKDFSVISKNLVKLNLELTSIKQLPLSIGSQSML 777

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
           + L LA    E +P+S+K L++L  L L+ C  L++LPELP    ++  R C SL+T+
Sbjct: 778 KMLRLAYTYIETLPTSIKHLTRLRHLDLRYCAGLRTLPELPPSLETLDVRECVSLETV 835



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 6/141 (4%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           TSL + I++ SL+ L L GC  LK F  IS N+  L+L+ T+I++LP SIG+ S L  L 
Sbjct: 722 TSLRSNIHMQSLRYLSLHGCLELKDFSVISKNLVKLNLELTSIKQLPLSIGSQSMLKMLR 781

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL---EYLNLAEKDFEKI 596
           L   + ++++ + + +L  LR L+L  C  L  LPE   +LE+L   E ++L    F  I
Sbjct: 782 LA-YTYIETLPTSIKHLTRLRHLDLRYCAGLRTLPELPPSLETLDVRECVSLETVMFPSI 840

Query: 597 PSSMKQLSKLSDLRLQNCKRL 617
           P   K+  K   +   NC +L
Sbjct: 841 PQQRKENKK--KVCFWNCLQL 859


>gi|357503303|ref|XP_003621940.1| TMV resistance protein N [Medicago truncatula]
 gi|355496955|gb|AES78158.1| TMV resistance protein N [Medicago truncatula]
          Length = 1093

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 243/733 (33%), Positives = 363/733 (49%), Gaps = 149/733 (20%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVF++FRG+D R   VSHL  ALC   I TF+DDK L +G E+ P L +AI+ S I I
Sbjct: 9   KYDVFINFRGEDTRRTIVSHLYTALCNAGINTFLDDKKLAKGEELGPELYTAIKMSHIFI 68

Query: 74  VIFSEGYASSRWCLNELVKILESKNKY----GQIVVPVFYLVDPSD-------------- 115
            +FS  YA S WCLNEL  I+E +++      ++V+P+FY VDPSD              
Sbjct: 69  AVFSPNYAQSSWCLNELAHIMELRHRRHSYSPRVVIPLFYHVDPSDVRKLKGDFGKGLKV 128

Query: 116 -------------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLS 150
                                    A     +GW    +   +E  L++  V DI  KL 
Sbjct: 129 SADKIFSQSGAEREEVLMSKWRRALAEVTNLVGWDA--NNFRNEGDLVQKLVEDILTKL- 185

Query: 151 DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
           D+      +  VG+E  ++ I   L   S +   +G+WG+GG GKTT+A AIY+ I   F
Sbjct: 186 DMSVLSITEFPVGLEPRVQSITKILYDESRKACMIGLWGMGGSGKTTLAKAIYNRIHREF 245

Query: 211 EG-SYFMQNIRD----------------------ESEKVGGLANIHLNFERRRLSRMKVL 247
           +G + F+++IR+                        +K+  +A + +N   +RL   KVL
Sbjct: 246 QGKTSFIESIREVCDYNRKGIIHLQEQLLSDLLKTKDKIHSIA-VGINKIEKRLQGQKVL 304

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           IV  D+T  +Q+  L G    F  GS +IITTRD    ++H  S    VF + E+  N+S
Sbjct: 305 IVLDDVTKSEQLKALGGNPKLFGSGSVLIITTRD----RSHLDSLSARVFTMIEMDKNES 360

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LFS +AF Q+ P   F +LS  V+ Y  G+PLAL+VLGSYL   +E+EW SA++KL +
Sbjct: 361 LELFSWHAFRQSCPRKDFGKLSRNVVSYCKGLPLALEVLGSYLSKRTEQEWRSALSKLTK 420

Query: 368 MPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
           +P+ ++ ++L++SYDGL+D  E++IFLD  CFF G ++  V   L+ C   A IG+S L+
Sbjct: 421 IPNNEVLQILRISYDGLEDYTEKDIFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLI 480

Query: 427 GKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
            +SL+ +  NNK  MHDLL++MG  IV + S K+P K SRLW  ED+  VL++ T   T 
Sbjct: 481 ERSLIKVDKNNKFQMHDLLRDMGRAIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTV 540

Query: 485 ---------------GIN----LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEEL 525
                          G N    ++ L+ L L G   +  +  IS  +  +D + +    +
Sbjct: 541 EGLILKWQRTGRICFGTNAFQEMEKLRLLKLDGVDLIGDYGLISKQLRWVDWQRSTFTFI 600

Query: 526 P------------------------------------------------SSIGNLSRLVD 537
           P                                                S + NL +LV 
Sbjct: 601 PNDFDQANLVVFELKYSNVKQVWQDTKLLEKLKVLKLSHSKYLKSSPDFSKLPNLEKLV- 659

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             + +C  L +V   + +LK+L  +NL  C+ LE LP EI  L+S++ L L      +K+
Sbjct: 660 --MKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLKSVKTLILTGCSTIDKL 717

Query: 597 PSSMKQLSKLSDL 609
              + Q+  L+ L
Sbjct: 718 EEDIVQMESLTSL 730



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 5/110 (4%)

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRL 553
           YL    +  + P    N+E L +K+  ++  +  SIG+L  L+ ++L +C  L+++   +
Sbjct: 642 YLKSSPDFSKLP----NLEKLVMKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREI 697

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             LKS++ L L+GC  ++KL E+I  +ESL  L       +++P S+ +L
Sbjct: 698 YQLKSVKTLILTGCSTIDKLEEDIVQMESLTSLITTGTSIKEVPYSILRL 747


>gi|30692996|ref|NP_198509.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332006745|gb|AED94128.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1188

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 261/748 (34%), Positives = 374/748 (50%), Gaps = 151/748 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG DVR NF+SHL  +L R  I TF+DD +L RG  ISP L +AIE SKI IV
Sbjct: 14  YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIV 73

Query: 75  IFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
           + ++ YASS WCL+ELV I++S KN    +V P+F  VDPSD       Y  S       
Sbjct: 74  VLTKDYASSAWCLDELVHIMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNS 133

Query: 124 --------W---------MGIFDIPT-SESVLIEGNVNDISKKLSDLF---PSDNKDQLV 162
                   W         +  +DI   +E+  I     +I K+L   +   PS      V
Sbjct: 134 HPLNKLKDWREALTKVANISGWDIKNRNEAECIADITREILKRLPCQYLHVPS----YAV 189

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G+ S ++ I S L  GS     + I+G+GGIGKTT+A   ++  S  FEGS F++N R+ 
Sbjct: 190 GLRSRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREY 249

Query: 223 SEKVGGLANIH------------LNFE------RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           S+K  G  ++             + F+      + R    +VL+V  D+ D+ Q++    
Sbjct: 250 SKKPEGRTHLQHQLLSDILRRNDIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQLNSAAI 309

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
             D F  GSR+IITTR++ LLK  R       +  KEL  ++SL LFS +AF  + P   
Sbjct: 310 DRDCFGHGSRIIITTRNMHLLKQLRAE---GSYSPKELDGDESLELFSWHAFRTSEPPKE 366

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           FL+ S  V+ Y  G+PLA++VLG++L   S  EWES +  LKR+P+ +IQ  L++S++ L
Sbjct: 367 FLQHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQISFNAL 426

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
             E++++FLD ACFF G D Y V   LD C     I +S L+ + L+TIS N I MHDLL
Sbjct: 427 TIEQKDVFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNIMMHDLL 486

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS------------ 490
           ++MG +IVR+ S K  G+RSRLW   D+  VL +   T+   G++L +            
Sbjct: 487 RDMGRQIVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQYFEVEA 546

Query: 491 ---LKEL------YLGGCSNLKRFPE-----------ISC--------NIEDLDLKETAI 522
              ++EL      Y+    + + FP+           + C        ++  LDL+ + +
Sbjct: 547 FAKMQELRLLELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNL 606

Query: 523 EEL-----PSSIGNLSRLVDLD---------------------LTNCSGLKSVSSRLCNL 556
           +       P    N+ + +DL                      L NC  L  V   +  L
Sbjct: 607 KRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVHKSIGIL 666

Query: 557 -KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE---------------------KDF- 593
            K L  LNLS C++L+ LPEEI  L+SLE L L+                       DF 
Sbjct: 667 DKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTTLLADFT 726

Query: 594 --EKIPSSMKQLSKLSDLRLQNCKRLQS 619
              +IPS++ QL KL  L L  CK L S
Sbjct: 727 ALREIPSTINQLKKLKRLSLNGCKGLLS 754



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 82/177 (46%), Gaps = 34/177 (19%)

Query: 469 PEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEEL 525
           PE+IY+             L SL+ L+L  CS L+R  +    +E L       TA+ E+
Sbjct: 685 PEEIYK-------------LKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREI 731

Query: 526 PSSIGNLSRLVDLDLTNCSGL-------------KSVS----SRLCNLKSLRRLNLSGC- 567
           PS+I  L +L  L L  C GL              SVS      L  L  +R L+L  C 
Sbjct: 732 PSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPVSLSGLTYMRILSLGYCN 791

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           L  E +PE+IG+L  L  L+L    F  +P+    L  L +L L +C +LQS+  LP
Sbjct: 792 LSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLP 848


>gi|10178211|dbj|BAB11635.1| TMV resistance protein N [Arabidopsis thaliana]
          Length = 1130

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 262/754 (34%), Positives = 374/754 (49%), Gaps = 158/754 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG DVR NF+SHL  +L R  I TF+DD +L RG  ISP L +AIE SKI IV
Sbjct: 14  YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIV 73

Query: 75  IFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSD-----AGYCPSL------ 122
           + ++ YASS WCL+ELV I++S KN    +V P+F  VDPSD       Y  S       
Sbjct: 74  VLTKDYASSAWCLDELVHIMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNS 133

Query: 123 --------------------GW---MGIFDIPTSESVLIEGNVNDISKKLSDLF---PSD 156
                               GW     I+D   +E+  I     +I K+L   +   PS 
Sbjct: 134 HPLNKLKDWREALTKVANISGWDIKNRIYD-SRNEAECIADITREILKRLPCQYLHVPS- 191

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
                VG+ S ++ I S L  GS     + I+G+GGIGKTT+A   ++  S  FEGS F+
Sbjct: 192 ---YAVGLRSRLQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFL 248

Query: 217 QNIRDESEKVGGLANIH------------LNFE------RRRLSRMKVLIVFYDLTDLKQ 258
           +N R+ S+K  G  ++             + F+      + R    +VL+V  D+ D+ Q
Sbjct: 249 ENFREYSKKPEGRTHLQHQLLSDILRRNDIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQ 308

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++      D F  GSR+IITTR++ LLK  R       +  KEL  ++SL LFS +AF  
Sbjct: 309 LNSAAIDRDCFGHGSRIIITTRNMHLLKQLRAE---GSYSPKELDGDESLELFSWHAFRT 365

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           + P   FL+ S  V+ Y  G+PLA++VLG++L   S  EWES +  LKR+P+ +IQ  L+
Sbjct: 366 SEPPKEFLQHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIPNDNIQAKLQ 425

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           +S++ L  E++++FLD ACFF G D Y V   LD C     I +S L+ + L+TIS N I
Sbjct: 426 ISFNALTIEQKDVFLDIACFFIGVDSYYVACILDGCNLYPDIVLSLLMERCLITISGNNI 485

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS------ 490
            MHDLL++MG +IVR+ S K  G+RSRLW   D+  VL +   T+   G++L +      
Sbjct: 486 MMHDLLRDMGRQIVREISPKKCGERSRLWSHNDVVGVLKKKSGTNAIEGLSLKADVMDFQ 545

Query: 491 ---------LKEL------YLGGCSNLKRFPE-----------ISC--------NIEDLD 516
                    ++EL      Y+    + + FP+           + C        ++  LD
Sbjct: 546 YFEVEAFAKMQELRLLELRYVDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALD 605

Query: 517 LKETAIEEL-----PSSIGNLSRLVDLD---------------------LTNCSGLKSVS 550
           L+ + ++       P    N+ + +DL                      L NC  L  V 
Sbjct: 606 LQYSNLKRFWKAQSPPQPANMVKYLDLSHSVYLRETPDFSYFPNVEKLILINCKSLVLVH 665

Query: 551 SRLCNL-KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE------------------- 590
             +  L K L  LNLS C++L+ LPEEI  L+SLE L L+                    
Sbjct: 666 KSIGILDKKLVLLNLSSCIELDVLPEEIYKLKSLESLFLSNCSKLERLDDALGELESLTT 725

Query: 591 --KDF---EKIPSSMKQLSKLSDLRLQNCKRLQS 619
              DF    +IPS++ QL KL  L L  CK L S
Sbjct: 726 LLADFTALREIPSTINQLKKLKRLSLNGCKGLLS 759



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 82/177 (46%), Gaps = 34/177 (19%)

Query: 469 PEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEEL 525
           PE+IY+             L SL+ L+L  CS L+R  +    +E L       TA+ E+
Sbjct: 690 PEEIYK-------------LKSLESLFLSNCSKLERLDDALGELESLTTLLADFTALREI 736

Query: 526 PSSIGNLSRLVDLDLTNCSGL-------------KSVS----SRLCNLKSLRRLNLSGC- 567
           PS+I  L +L  L L  C GL              SVS      L  L  +R L+L  C 
Sbjct: 737 PSTINQLKKLKRLSLNGCKGLLSDDIDNLYSEKSHSVSLLRPVSLSGLTYMRILSLGYCN 796

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           L  E +PE+IG+L  L  L+L    F  +P+    L  L +L L +C +LQS+  LP
Sbjct: 797 LSDELIPEDIGSLSFLRDLDLRGNSFCNLPTDFATLPNLGELLLSDCSKLQSILSLP 853


>gi|124361170|gb|ABN09142.1| TIR [Medicago truncatula]
          Length = 1054

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 242/720 (33%), Positives = 362/720 (50%), Gaps = 121/720 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVF++FRG+D R   VSHL  ALC   I TF+DDK L +G E+ P L +AI+ S I I
Sbjct: 9   KYDVFINFRGEDTRRTIVSHLYTALCNAGINTFLDDKKLAKGEELGPELYTAIKMSHIFI 68

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYG----QIVVPVFYLVDPSD-------------- 115
            +FS  YA S WCLNEL  I+E +++      ++V+P+FY VDPSD              
Sbjct: 69  AVFSPNYAQSSWCLNELAHIMELRHRRHSYSPRVVIPLFYHVDPSDVRKLKGDFGKGLKV 128

Query: 116 -------------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLS 150
                                    A     +GW    +   +E  L++  V DI  KL 
Sbjct: 129 SADKIFSQSGAEREEVLMSKWRRALAEVTNLVGWDA--NNFRNEGDLVQKLVEDILTKL- 185

Query: 151 DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
           D+      +  VG+E  ++ I   L   S +   +G+WG+GG GKTT+A AIY+ I   F
Sbjct: 186 DMSVLSITEFPVGLEPRVQSITKILYDESRKACMIGLWGMGGSGKTTLAKAIYNRIHREF 245

Query: 211 EG-SYFMQNIRD----------------------ESEKVGGLANIHLNFERRRLSRMKVL 247
           +G + F+++IR+                        +K+  +A + +N   +RL   KVL
Sbjct: 246 QGKTSFIESIREVCDYNRKGIIHLQEQLLSDLLKTKDKIHSIA-VGINKIEKRLQGQKVL 304

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           IV  D+T  +Q+  L G    F  GS +IITTRD    ++H  S    VF + E+  N+S
Sbjct: 305 IVLDDVTKSEQLKALGGNPKLFGSGSVLIITTRD----RSHLDSLSARVFTMIEMDKNES 360

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LFS +AF Q+ P   F +LS  V+ Y  G+PLAL+VLGSYL   +E+EW SA++KL +
Sbjct: 361 LELFSWHAFRQSCPRKDFGKLSRNVVSYCKGLPLALEVLGSYLSKRTEQEWRSALSKLTK 420

Query: 368 MPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
           +P+ ++ ++L++SYDGL+D  E++IFLD  CFF G ++  V   L+ C   A IG+S L+
Sbjct: 421 IPNNEVLQILRISYDGLEDYTEKDIFLDICCFFIGKNRVDVTEILNGCGLHADIGVSVLI 480

Query: 427 GKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
            +SL+ +  NNK  MHDLL++MG  IV + S K+P K SRLW  ED+  VL++ T   T 
Sbjct: 481 ERSLIKVDKNNKFQMHDLLRDMGRAIVSESSAKEPEKHSRLWCHEDVLDVLSKKTGTKTV 540

Query: 485 ---------------GIN----LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEEL 525
                          G N    ++ L+ L L G   +  +  IS  +  +D + +    +
Sbjct: 541 EGLILKWQRTGRICFGTNAFQEMEKLRLLKLDGVDLIGDYGLISKQLRWVDWQRSTFTFI 600

Query: 526 PSSIGNLSRLV-DLDLTNCSG---------------------LKSVSSRLCNLKSLRRLN 563
           P+     + +V +L  +N                        LKS S     L +L +L 
Sbjct: 601 PNDFDQANLVVFELKYSNVKQVWQDTKLLEKLKVLKLSHSKYLKS-SPDFSKLPNLEKLV 659

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +  C  L  +   IG+L++L  +NL +    E +P  + QL  +  L L  C  +  L E
Sbjct: 660 MKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREIYQLKSVKTLILTGCSTIDKLEE 719



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 5/110 (4%)

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRL 553
           YL    +  + P    N+E L +K+  ++  +  SIG+L  L+ ++L +C  L+++   +
Sbjct: 642 YLKSSPDFSKLP----NLEKLVMKDCQSLSNVHPSIGDLKNLLLINLKDCIILENLPREI 697

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             LKS++ L L+GC  ++KL E+I  +ESL  L       +++P S+ +L
Sbjct: 698 YQLKSVKTLILTGCSTIDKLEEDIVQMESLTSLITTGTSIKEVPYSILRL 747


>gi|357513279|ref|XP_003626928.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355520950|gb|AET01404.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1087

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 225/642 (35%), Positives = 354/642 (55%), Gaps = 79/642 (12%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P   HDVF++FRGKD R  FVSHL AAL    I TF+DD+ L +G E+ P L  AI+GS+
Sbjct: 10  PQWIHDVFINFRGKDTRKTFVSHLYAALTDAGINTFLDDENLKKGEELGPELVRAIQGSQ 69

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCP--------- 120
           I+IV+FS+ Y +S WCLNEL +I++ K   GQ+V+PVF  + PS+   + P         
Sbjct: 70  IAIVVFSKNYVNSSWCLNELEQIMKCKADNGQVVMPVFNGITPSNIRQHSPVILVDELDQ 129

Query: 121 ----------SLGWMGIFDIP--TSESVLIEGNVNDISKKLSDLF-PSDNKDQLVGVESI 167
                      + ++  +D+   +++S +++  V+ + K L   + P  N    VG++  
Sbjct: 130 IIFGKKRALRDVSYLTGWDMSNYSNQSKVVKEIVSQVLKNLDKKYLPLPNFQ--VGLKPR 187

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG 227
            ++    L   + +   VGIWG+GGIGK+TIA  IY+++   FE   F+ NIR+  EK  
Sbjct: 188 AEKPIRFLRQNTRKVCLVGIWGMGGIGKSTIAKVIYNDLCYEFEDQSFVANIREVWEKDR 247

Query: 228 GLANIH---------------LNFE------RRRLSRMKVLIVFYDLTDLKQIDLLI-GR 265
           G  ++                L+ E      ++RL   ++L V  D+++L+Q + L  G 
Sbjct: 248 GRIDLQEQLLSDILKTRKIKVLSVEQGKAMIKQRLRSKRILAVLDDVSELEQFNALCEGN 307

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
             G  PGS +IITTRD+++L       V  ++E + L+ ++SL LF  +AF +  P   F
Sbjct: 308 SVG--PGSVIIITTRDLRVLNI---LEVDFIYEAEGLNASESLELFCGHAFRKVIPTEDF 362

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
           L LS  V+ Y  G+PLAL+VLGSYL    ++EW+S ++KL+++P+  I + LK+S++GL 
Sbjct: 363 LILSRYVVAYCGGIPLALEVLGSYLLKRRKQEWQSVLSKLEKIPNDQIHEKLKISFNGLS 422

Query: 386 DE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDL 443
           D  E++IFLD  CFF G D+  V   L+ C   A IGI+ L+ +SL+ +  N K+ MHDL
Sbjct: 423 DRMEKDIFLDVCCFFIGKDRAYVTKILNGCGLHADIGITVLIERSLIKVEKNKKLGMHDL 482

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT----------SLPT-------GI 486
           L++MG EIVR+ S ++P KR+RLW  ED+  VL ++T           LP         I
Sbjct: 483 LRDMGREIVRESSPEEPEKRTRLWCHEDVVNVLEDHTGTKAIEGLVMKLPKTNRVCFDTI 542

Query: 487 NLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
             + +K L L    N++   +  C   ++  L  +   ++  P +      +V +DL + 
Sbjct: 543 AFEKMKRLRLLQLDNVQVIGDYKCFSKHLRWLSWQGFPLKYTPENFYQ-KNVVAMDLKH- 600

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESL 583
           S L  V  +   ++ L+ LNLS    L++ P+  ++ NLE L
Sbjct: 601 SNLTQVWKKPQLIEGLKILNLSHSKYLKRTPDFSKLPNLEKL 642



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK L L     LKR P+ S   N+E L +K+  ++ E+  SIG+L  L+ L+L +C+
Sbjct: 613 IEGLKILNLSHSKYLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDLKNLLLLNLKDCT 672

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++   +  L+++  L LSGC K++KL E+I  +ESL  L  A    ++ P S+
Sbjct: 673 SLSNLPREIYQLRTVETLILSGCSKIDKLEEDIVQMESLTTLMAANTGVKQPPFSI 728


>gi|357499675|ref|XP_003620126.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495141|gb|AES76344.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1013

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 207/526 (39%), Positives = 302/526 (57%), Gaps = 67/526 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF G D R  F  +L  AL  +KI TFIDDK L RG+EI+PSL  AI+ S+I+I 
Sbjct: 14  YDVFLSFTGADTRFGFTGNLYKALTDKKIRTFIDDKELQRGDEITPSLVKAIQESRIAIP 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTS- 133
           IFS  YASS +CL+ELV I+E   + G++V+P+FY VDPS   +       G+ D+    
Sbjct: 74  IFSTNYASSSFCLDELVHIVECVKRKGRLVLPIFYDVDPSHVRHQTGSYGKGMTDLEERF 133

Query: 134 -------------------------------ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                                          E   I   V ++S K ++  P    D  V
Sbjct: 134 KNNKEKLQKWKMALNQVANLAGYHFKLGNEYEYEFIVKIVKEVSNK-TERVPLHVADYPV 192

Query: 163 GVESIIKEIESQLLSGSTEFN----TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           G+E  + +++S LL   T+F+     VGI+GIGG+GKTT+A AIY+ I   FE   F+ +
Sbjct: 193 GIEYRLLKVKSYLLD--TKFDDRVQMVGIYGIGGLGKTTLARAIYNMIGDKFECLCFLHD 250

Query: 219 IRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           +R+ S K G                   G  N  +   ++RL R KVL++  D+ +++Q+
Sbjct: 251 LRESSAKHGLEHLQQKLLSKTVELDTKLGDVNEGIPIIKQRLGRKKVLLILDDVDNMRQL 310

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            ++ G LD F PGS VIITTRD  LL +H   R    ++V  L+  +SL LF   AF  +
Sbjct: 311 QVMAGGLDWFGPGSIVIITTRDQHLLTSHGIHRK---YQVDALNRIESLELFRWKAFKDS 367

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
              + + ++ +  I YA+G+PL L+++G  L G + EEW+S +++ +R+P+ +IQ +LK+
Sbjct: 368 IGDSRYDDILDRAIAYASGLPLVLELVGPALFGKNIEEWKSILDRYERIPNKEIQNILKI 427

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTI----S 434
           S+D L+++EQ +FLD AC FKG D   V + L A    S +  I  LV K+L+ I    +
Sbjct: 428 SFDALEEDEQGVFLDIACCFKGYDLGEVKDILCAHHGQSIEYHIGVLVEKTLIQIIHLGT 487

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           +  +T+HDL+++MG EIVRQES K+PGKRSRLW  EDI QVL EN+
Sbjct: 488 DAVVTLHDLIEDMGKEIVRQESPKEPGKRSRLWFYEDIVQVLEENS 533



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 47/234 (20%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPS 527
           D Y   N  +  P  + L SL+ L L  C++L+RFPEI     NI D+    T+I+ELP 
Sbjct: 691 DAYGCSNLKSFPP--LKLTSLEALGLSYCNSLERFPEILGKMENITDMFCVGTSIKELPF 748

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK--------------- 572
           S  NL+RL  L L    G + + S +  +  L   + SGCL  ++               
Sbjct: 749 SFQNLTRLEKLRLWG-DGKQILQSSILTMPKLLT-DASGCLFPKQNAELSSIVPSDVRIL 806

Query: 573 -----------LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                      LP  +    ++E+L+L+  +F  +P  ++Q   LS L + +CK L+ + 
Sbjct: 807 GLPKCNPSDDFLPIILTWFANVEHLDLSWNNFTVLPKCLEQCCLLSLLNVNSCKYLREIQ 866

Query: 622 ELPCG-SSIHARHCTSLKTLSN-------------SSTLLTRSSKHWDIFNFSN 661
            +P     + A HC SL ++S              +  + TRS++  + F   N
Sbjct: 867 GVPPKLKRLSALHCKSLTSMSRRMLLNQELHEYGGAEFIFTRSTRFPEWFEHQN 920



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
           SIG L++L  LD   CS LKS       L SL  L LS C  LE+ PE +G +E++  + 
Sbjct: 680 SIGFLNKLKILDAYGCSNLKSFPP--LKLTSLEALGLSYCNSLERFPEILGKMENITDMF 737

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRL 611
                 +++P S + L++L  LRL
Sbjct: 738 CVGTSIKELPFSFQNLTRLEKLRL 761


>gi|297790458|ref|XP_002863119.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308943|gb|EFH39378.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1121

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 245/722 (33%), Positives = 351/722 (48%), Gaps = 134/722 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR +F+SH++    R  I  FID+++ RG  I P L  AI  SKI+I++
Sbjct: 63  HHVFPSFRGEDVRRDFLSHIHMEFQRMGITPFIDNEIERGQSIGPELIRAIRESKIAIIL 122

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------- 115
            S  YASS WCL+EL +I++ + + GQ V+ VFY VDPSD                    
Sbjct: 123 LSRNYASSSWCLDELAEIMKCREELGQTVLAVFYKVDPSDVKKLTGDFGKVFKKTCAGKT 182

Query: 116 -----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                            AGY  S  W        +E+ +I     DIS KL++   S + 
Sbjct: 183 KEHVGRWRQALANVATIAGY-HSTNW-------DNEATMIRNIATDISNKLNNSASSSDF 234

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           D LVG+ + +K++E  L   S E   +GIWG  GIGKTTIA  +Y+ +SS F+ S FM++
Sbjct: 235 DGLVGMTAHLKKMEPLLCLDSDEVRMIGIWGPSGIGKTTIARVVYNKLSSSFQLSVFMES 294

Query: 219 IR---------DESEKV-------------GGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
           I          D S K+              G+   HL   + RL   KVL+V   +   
Sbjct: 295 IEAKYTRPCSDDYSAKLQLQQQFMSQITNQSGMKISHLGVVQDRLKDKKVLVVLDGVDKS 354

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q+D +      F PGS++IIT +D ++ + H    + H+++V   S +++L +    AF
Sbjct: 355 MQLDAMAKETWWFGPGSQIIITAQDRKIFREHG---INHIYKVGFPSTDEALQILCTYAF 411

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           GQ  P  GF EL+  V   A  +PL L+V+GSY +GMS+ EW  A+ +L+     DI  +
Sbjct: 412 GQKSPKHGFEELAWEVTHLAGELPLGLRVMGSYFRGMSKLEWTKALPRLRSSLDADILSI 471

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           LK SYD LDDE++ +FL  ACFF        ++YL   FLD         ++ L  KSL+
Sbjct: 472 LKFSYDALDDEDKYLFLHIACFFNYKRIGRVEEYLAETFLDVSH-----RLNGLAEKSLI 526

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN---ENTSLPTGINL 488
           ++++  I MHDLL ++G +IVR++S+++PG+R  L    +I +VLN     +    GIN 
Sbjct: 527 SMNDGVIIMHDLLVKLGIDIVRKQSLREPGQRLFLVDAREICEVLNLDANGSRSVIGINY 586

Query: 489 D----------SLKELYLGGCSNLK-----------RFPE----ISCNIEDLDLKETAIE 523
           +           L E    G SNL+             P     IS  +  LD     + 
Sbjct: 587 NFGGNRIKEKLHLSERAFQGMSNLQFLRVKGNNNTIHLPHGLEYISRKLRLLDWTYFPMT 646

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVS---SRLCNLK--------------------SLR 560
            LP  I N   LV+LD+  CS L+ +      L NLK                    +LR
Sbjct: 647 CLP-PIFNTDFLVELDM-RCSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPDLSTATNLR 704

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
            LNL  C  L  LP  IGN  +LE L L       ++PSS+  L  L +L L +   L  
Sbjct: 705 TLNLRYCSSLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINLKELDLSSLSCLVE 764

Query: 620 LP 621
           LP
Sbjct: 765 LP 766



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 89/170 (52%), Gaps = 25/170 (14%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           +LP+ I N  +L+ LYLGGCS+L                     ELPSSIGNL  L +LD
Sbjct: 716 NLPSSIGNATNLELLYLGGCSSLV--------------------ELPSSIGNLINLKELD 755

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
           L++ S L  +   + NL +L+ LNLS    L +LP  IGN  +LE LNL +  +  K+P 
Sbjct: 756 LSSLSCLVELPFSIGNLINLKVLNLSSLSCLVELPFSIGNATNLEVLNLRQCSNLVKLPF 815

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPE-LPCGS--SIHARHCTSLKTLSNSST 645
           S+  L KL  L L+ C +L+ LP  +  GS  S+    C  LK     ST
Sbjct: 816 SIGNLQKLQTLNLRGCSKLEVLPANIKLGSLWSLDLTDCILLKRFPEIST 865



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  I L SL  L L  C  LKRFPEIS N+  + L  T IEE+PSSI + SR  ++ ++
Sbjct: 837 LPANIKLGSLWSLDLTDCILLKRFPEISTNVGFIWLIGTTIEEVPSSIKSWSRPNEVHMS 896

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK+                         P     +  L+  N    + +++P  + 
Sbjct: 897 YSENLKN------------------------FPHAFDIITRLQVTN---TEIQEVPPWVN 929

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           + S+L+ L+L+ CK+L SLP++P   S I A  C SL+ L  S
Sbjct: 930 KFSRLTVLKLKGCKKLVSLPQIPDSISDIDAEDCESLERLDCS 972



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 17/176 (9%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAI-EELPSSIGNLSRL 535
           T LP   N D L EL +  CS L++  E      N++ +DL  + + +ELP  +   + L
Sbjct: 646 TCLPPIFNTDFLVELDMR-CSKLEKLWEGIKPLPNLKRMDLSSSLLLKELPD-LSTATNL 703

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FE 594
             L+L  CS L ++ S + N  +L  L L GC  L +LP  IGNL +L+ L+L+      
Sbjct: 704 RTLNLRYCSSLMNLPSSIGNATNLELLYLGGCSSLVELPSSIGNLINLKELDLSSLSCLV 763

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELP--CGSS-----IHARHCTSLKTLSNS 643
           ++P S   +  L +L++ N   L  L ELP   G++     ++ R C++L  L  S
Sbjct: 764 ELPFS---IGNLINLKVLNLSSLSCLVELPFSIGNATNLEVLNLRQCSNLVKLPFS 816


>gi|357499687|ref|XP_003620132.1| Resistance protein [Medicago truncatula]
 gi|355495147|gb|AES76350.1| Resistance protein [Medicago truncatula]
          Length = 1608

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 246/684 (35%), Positives = 360/684 (52%), Gaps = 86/684 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D RH F  +L  AL  + + TF+DDK L +G EI+PSL  AIE S ++I
Sbjct: 9   KYDVFLSFRGEDTRHGFTGYLKKALDDKGVRTFMDDKELRKGEEITPSLLKAIEQSMMAI 68

Query: 74  VIFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSDAGYCP-SLG-------- 123
           V+ SE YASS +CL EL KIL++ K+  G+ V PVFY VDPSD      S G        
Sbjct: 69  VVLSENYASSSFCLQELSKILDTMKDMVGRSVFPVFYKVDPSDVRKLKRSFGEGMDKHKA 128

Query: 124 ------W----MGIFDIP-------TSESVLIEGNVNDISKKLSDL-FPSDNKDQLVGVE 165
                 W      + D+        T E + I   V  +   +  L  P    D L+G+E
Sbjct: 129 NSNLDKWKVSLHQVTDLSGFHYKGDTPEHMFIGDIVEQVLGNIEPLALPVG--DYLIGLE 186

Query: 166 SIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
              + + S L  GS +  + VGI G+GGIGKTT+A ++Y+ I+  F+ S F++N+R+  E
Sbjct: 187 HQKQHLTSLLNIGSDDTVHMVGIHGMGGIGKTTLALSVYNLIAHEFDASCFLENVRENHE 246

Query: 225 KVG--GLANIHLN-----------------FERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
           K G   L NI L+                    +RL + K+L++  D+ + +Q+  L G+
Sbjct: 247 KHGLPYLQNIILSKVVGEKNALTGVRQGISILEQRLRQKKLLLILDDVNEQEQLKALAGK 306

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH-PAAG 324
              F P SR+IITTRD +LL  H    V H +EV+ L+  D+  L    AF     P+  
Sbjct: 307 HKWFGPSSRIIITTRDKKLLTCHG---VEHTYEVRGLNAKDAFELVRWKAFKDEFSPSDE 363

Query: 325 FLELSNI-----VIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            + L+ +     V+ YA+G PLAL+V+GS+    + E+ + A+++ +++PH  IQ  L++
Sbjct: 364 NVSLAQLHVIERVVAYASGHPLALEVMGSHFSNKTIEQCKDALDRYEKVPHKKIQTTLQI 423

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFS-AKIGISRLVGKSLVTISN-NK 437
           S+D L+DEE+ +FLD AC FKG     V   L A      K  I+ LV KSL+ I+    
Sbjct: 424 SFDALEDEEKFVFLDIACCFKGCKLTRVDEILHAHHGEIVKDHINVLVEKSLIKINEFGN 483

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-------SLPTG----I 486
           +T+HDL+++MG EIVRQES +DPGKR+RLW   DI QVL ENT       +L T     I
Sbjct: 484 VTLHDLVEDMGKEIVRQESPQDPGKRTRLWFSNDIMQVLEENTVSNNVMDNLGTSQIEII 543

Query: 487 NLDSLKELYLGGCSNLKRFPE--------ISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
             D    +   G    K+ P+        + C+    D    A+  L     N   +  L
Sbjct: 544 RFDCWTTVAWDGEFFFKKSPKHLPNSLRVLECHNPSSDFL-VALSLLNFPTKNFQNMRVL 602

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK-DFEKIP 597
           +L   SGL  + + +  L +L +L++  C KL  + + +G L  L+ L L    + + IP
Sbjct: 603 NLEGGSGLVQIPN-ISGLSNLEKLSIKNCWKLIAIDKSVGFLGKLKILRLINCIEIQSIP 661

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP 621
             M  L+ L +L L  C  L+S P
Sbjct: 662 PLM--LASLVELHLSGCNSLESFP 683



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 18/175 (10%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCN-IEDLDLKET-AIEELPSSI-GNLSR 534
           EN  L     L  LK L + GC  L   P +  N +E LDL +  ++E  P  +   L +
Sbjct: 727 ENFPLVVDAFLGKLKTLNVKGCCKLTSIPPLKLNSLETLDLSQCYSLENFPLVVDAFLGK 786

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----EEIGNLESLEYLNLAE 590
           L  L++ +C  LKS+      L SL  LNLS C  LE  P    E +G L++L +     
Sbjct: 787 LKTLNVESCHNLKSIQP--LKLDSLIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKC-- 842

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-----SSIHARHCTSLKTL 640
            + + IP    +L+ L  L   +C RL+S P +  G      ++  R C +LK++
Sbjct: 843 HNLKSIPPL--KLNSLETLDFSSCHRLESFPPVVDGFLGKLKTLLVRKCYNLKSI 895



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 11/171 (6%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED-LDLKETAIEELPSSIG--NLSR 534
           E  S+P  + L SL EL+L GC++L+ FP +     D L        ++  SI    L+ 
Sbjct: 656 EIQSIPP-LMLASLVELHLSGCNSLESFPPVLDGFGDKLKTMNVIYCKMLRSIPPLKLNS 714

Query: 535 LVDLDLTNCSGLKSVSSRL-CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
           L  LDL+ C  L++    +   L  L+ LN+ GC KL  +P     L SLE L+L++   
Sbjct: 715 LETLDLSQCYSLENFPLVVDAFLGKLKTLNVKGCCKLTSIPPL--KLNSLETLDLSQCYS 772

Query: 593 FEKIPSSMKQ-LSKLSDLRLQNCKRLQSLPELPCGSSIHAR--HCTSLKTL 640
            E  P  +   L KL  L +++C  L+S+  L   S I+    HC +L+  
Sbjct: 773 LENFPLVVDAFLGKLKTLNVESCHNLKSIQPLKLDSLIYLNLSHCYNLENF 823



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 7/130 (5%)

Query: 481 SLPTGIN--LDSLKELYLGGCSNLKRFPEISCN-IEDLDLKET-AIEELPSSI-GNLSRL 535
           S P  ++  L  LK L +  C NLK  P +  + +E LDL    ++E  P  + G L +L
Sbjct: 869 SFPPVVDGFLGKLKTLLVRKCYNLKSIPPLKLDSLEKLDLSCCCSLESFPCVVDGLLDKL 928

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
             L++  C  L+++  RL  L SL   NLS C  LE  PE +G + ++  L   +   ++
Sbjct: 929 KFLNIECCIMLRNIP-RL-RLTSLEYFNLSCCYSLESFPEILGEMRNIPGLLKDDTPIKE 986

Query: 596 IPSSMKQLSK 605
           IP   K L++
Sbjct: 987 IPFPFKTLTQ 996



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 34/168 (20%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI--------------SCN------------IEDLDLKE 519
           + LDSL  L L  C NL+ FP +               C+            +E LD   
Sbjct: 804 LKLDSLIYLNLSHCYNLENFPSVVDEFLGKLKTLCFAKCHNLKSIPPLKLNSLETLDFSS 863

Query: 520 TA-IEELPSSI-GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
              +E  P  + G L +L  L +  C  LKS+      L SL +L+LS C  LE  P  +
Sbjct: 864 CHRLESFPPVVDGFLGKLKTLLVRKCYNLKSIPP--LKLDSLEKLDLSCCCSLESFPCVV 921

Query: 578 -GNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            G L+ L++LN+        IP    +L+ L    L  C  L+S PE+
Sbjct: 922 DGLLDKLKFLNIECCIMLRNIPRL--RLTSLEYFNLSCCYSLESFPEI 967


>gi|154424272|gb|ABS82021.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 245/752 (32%), Positives = 369/752 (49%), Gaps = 121/752 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VFLSFRG+DVR   +SH+     R  I  FID+++ RG  I P L  AI GSKI+I++
Sbjct: 40  HPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEMKRGGSIGPELLQAIRGSKIAIIL 99

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------GYC 119
            S  Y SS+WCL+ELV+I++ + + GQ V+ VFY VDPSD                 G  
Sbjct: 100 LSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFKKTCVGRP 159

Query: 120 PSLGWMGIFDIPTSESVLIEGNVN---------DISKKLSDLF---PSDNKDQLVGVESI 167
             +       + ++ ++L E + N          ISK +SD+    PS + D+ VG+E+ 
Sbjct: 160 EEMVQRWKQALTSAANILGEDSRNWENEADMIIKISKDVSDVLSFTPSKDFDEFVGIEAH 219

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR------- 220
             EI S L     E   +GIWG  GIGKTTI+  +Y+ +   F+    + NI+       
Sbjct: 220 TTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPC 279

Query: 221 -DE--------SEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
            DE         E +  + N       HL   + RL   KVL+V  D+  L Q+D +   
Sbjct: 280 HDEYSAKLQLQKELLSQMINQKDMVVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKD 339

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
           +  F  GSR+I+ T+D++LLK H    + ++++V   + +++L +F   AFG+  P  GF
Sbjct: 340 VQWFGLGSRIIVVTQDLKLLKAHG---IKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGF 396

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            +++  V   A  +PL L+V+GSYL+ MS++EW  ++ +L+     DI+ VLK SY+ L 
Sbjct: 397 EQIARTVTTLAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLA 456

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           ++E+++FL   CFF+      +  FL       + G+  L  KSL++++   I MH+LL 
Sbjct: 457 EQEKDLFLHITCFFRRERIETLEVFLAKKSVDVRQGLQILADKSLLSLNLGNIEMHNLLV 516

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNL-KR 504
           ++G +IVR++SI  PGKR  L   EDI +VL ++T   T I +D      + G  N+ +R
Sbjct: 517 QLGLDIVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISER 576

Query: 505 FPEISCNIEDLDLKETA------IEELPSSIGNLSRLVDL-------------------- 538
             E  CN++ L            I  LP  + ++SR + L                    
Sbjct: 577 AFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFL 636

Query: 539 --------------------------DLTNCSGLKSVS--SRLCNLKSLRRLNLSGCLKL 570
                                     DL+ C  LK +   S   NL+ LR +N   CL L
Sbjct: 637 VKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLIN---CLSL 693

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
            +LP  IGN+ +L  L+L +     K+PSS+  L+ L  L L  C  L  LP     SS 
Sbjct: 694 VELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLP-----SSF 748

Query: 630 HARHCTSLK--TLSNSSTLLTRSSKHWDIFNF 659
              + TSLK   LS  S+LL   S   +I N 
Sbjct: 749 G--NVTSLKELNLSGCSSLLEIPSSIGNIVNL 778



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 109/222 (49%), Gaps = 49/222 (22%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE------TAIEELPSSIGNLSR 534
           LP+   N+ SLKEL L GCS+L   P    NI  ++LK+      +++ +LPSSIGN + 
Sbjct: 744 LPSSFGNVTSLKELNLSGCSSLLEIPSSIGNI--VNLKKLYADGCSSLVQLPSSIGNNTN 801

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE---- 590
           L +L L NCS L    S + NL  L  LNLSGCL L KLP  IGN+ +L+ L L++    
Sbjct: 802 LKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPS-IGNVINLQSLYLSDCSSL 860

Query: 591 ---------------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
                                 +  ++PSS+  ++ L  L L  C  L+ LP L      
Sbjct: 861 MELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPSL------ 914

Query: 630 HARHCTSLKTLS--NSSTLLTRSSKHWDIFNF-----SNCSN 664
              +  +L++LS    S+L+   S  W I N      SNCS+
Sbjct: 915 -VENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSS 955



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 101/217 (46%), Gaps = 40/217 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKE-TAIEELPSSIGNLSRLVD 537
           LP      +L+EL L  C +L   P    N+    +LDL + +++ +LPSSIGNL+ L  
Sbjct: 673 LPDFSTATNLQELRLINCLSLVELPSSIGNVTNLLELDLIDCSSLVKLPSSIGNLTNLKK 732

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL----------- 586
           L L  CS L  + S   N+ SL+ LNLSGC  L ++P  IGN+ +L+ L           
Sbjct: 733 LFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKLYADGCSSLVQL 792

Query: 587 --------NLAE------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS----- 627
                   NL E          + PSSM  L++L DL L  C  L  LP +  G+     
Sbjct: 793 PSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSI--GNVINLQ 850

Query: 628 SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           S++   C+SL  L  +      ++ + D      CSN
Sbjct: 851 SLYLSDCSSLMELPFT----IENATNLDTLYLDGCSN 883



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 9/161 (5%)

Query: 486 INLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTN 542
           +NL  L++L L GC +L + P I    N++ L L + +++ ELP +I N + L  L L  
Sbjct: 821 LNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDG 880

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMK 601
           CS L  + S + N+ +L+ L L+GC  L++LP  + N  +L+ L+L +     ++PSS+ 
Sbjct: 881 CSNLLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIW 940

Query: 602 QLSKLSDLRLQNCKRLQSL-----PELPCGSSIHARHCTSL 637
           ++S LS L + NC  L  L     P +P    + A  C SL
Sbjct: 941 RISNLSYLDVSNCSSLVELNLVSHPVVPDSLILDAGDCESL 981


>gi|255563220|ref|XP_002522613.1| hypothetical protein RCOM_0884420 [Ricinus communis]
 gi|223538089|gb|EEF39700.1| hypothetical protein RCOM_0884420 [Ricinus communis]
          Length = 708

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 213/525 (40%), Positives = 285/525 (54%), Gaps = 71/525 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS+SS+    P  K+DVFLSFRG D R+ F+SHL  AL  ++I TF D+ L+RG  IS 
Sbjct: 1   MASTSSTP---PRRKYDVFLSFRGLDTRNAFLSHLFKALTEKQIITFKDENLDRGERISN 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-- 118
           +L   I  S +S+VIFS+ YA S WCL ELV IL+   + GQ+V+PVFY +DP++     
Sbjct: 58  TLLQTIRESYVSVVIFSKNYACSTWCLEELVTILQCNEEMGQVVLPVFYEIDPTEVQELT 117

Query: 119 ----------------CPSLGW----------MGIFDIPTS-ESVLIEGNVNDISKKLSD 151
                           C    W           G     T  ES LIE  VN + KKL+ 
Sbjct: 118 GSYGNALMNHRKEFEDCSVESWSHALKKVGAMAGFVSWDTKPESKLIEEIVNHVWKKLNQ 177

Query: 152 LFP-----SDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
            F          D LVG+ S IK+IE  L   S     +GIWG+GG  K      +   I
Sbjct: 178 AFSYDHCDDGCDDGLVGINSRIKDIEQILCRESKGVRILGIWGMGG--KEYSDQGMPIKI 235

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
           SS     + M                          R KVLIV  D+ D +QID L+   
Sbjct: 236 SSFSIKKWIM--------------------------RKKVLIVLDDVNDSEQIDFLVRPR 269

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
           D + P S +I+T+RD Q+LK         ++EVKEL+ +++  LF  +AF  N PA    
Sbjct: 270 DIYGPESTIIMTSRDQQILKYGNAD----IYEVKELNSDEAFKLFILHAFKGNPPAEALK 325

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
           E++ + ++Y  G PLAL+VLGS L   S EE    + KL+ +    IQ +L++S+D LDD
Sbjct: 326 EVARMAVEYGRGNPLALKVLGSTLYDKSTEECRDHLKKLEDISDKKIQNILRISFDDLDD 385

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQE 446
           +E+ IFLD ACFFK  D+  V + L +   SA IGI  L  KSL+T+SN KI MHDLLQ+
Sbjct: 386 DEKEIFLDIACFFKWEDKNEVESILSSFGRSAIIGIRVLQDKSLITVSNKKIEMHDLLQQ 445

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSL 491
           MG +IVRQE IK P KRSRLW  +DIY VL ++  L   I+++S+
Sbjct: 446 MGRDIVRQECIKHPEKRSRLWISQDIYHVLTKD--LGRSISVESI 488


>gi|356560031|ref|XP_003548299.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1091

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 253/731 (34%), Positives = 364/731 (49%), Gaps = 122/731 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+++ S+  I    +DVFLSFRG D R+ F  +L  AL    I TFIDD+ L RG++I+
Sbjct: 1   MAATTRSLASI----YDVFLSFRGLDTRNGFTGNLYKALGDRGIYTFIDDQELPRGDKIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
           P+LS+AI  S+I+I + SE YA S +CL+ELV IL  K++ G +V+PVFY VDPSD  + 
Sbjct: 57  PALSNAINESRIAITVLSENYAFSSFCLDELVTILHCKSE-GLLVIPVFYKVDPSDVRHQ 115

Query: 119 -------------------------------CPSLGWMGIFDIPTSESVLIEGNVNDISK 147
                                             L      D    E   I+  V  +S+
Sbjct: 116 KGSYGETMTKHQKRFESKMEKLREWRMALQQVADLSGYHFKDGDAYEYKFIQSIVEQVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           +++   P    D  VG+ S + E+   L  GS +  + +GI G+GG+GKTT+A A+Y+ I
Sbjct: 176 EINRA-PLHVADYPVGLGSQVIEVRKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVYNLI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I L       +  + RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  ++GR D F PGSRVIITTRD  LLK H   R    +EVK L+ + 
Sbjct: 295 LLILDDVDKREQLKAIVGRPDWFGPGSRVIITTRDKHLLKYHEVERT---YEVKVLNQSA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L   NAF +      + ++ N V+ YA+G+PLAL+V+GS L G +  EWESA+   K
Sbjct: 352 ALQLLKWNAFKREKIDPSYEDVLNRVVTYASGLPLALEVIGSNLFGKTVAEWESAMEHYK 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK---IGIS 423
           R+P  +I ++LKVS+D L +E++N+FLD AC F+G     V + L A   + K   IG+ 
Sbjct: 412 RIPSDEILEILKVSFDALGEEQKNVFLDIACCFRGYKWTEVDDILRALYGNCKKHHIGV- 470

Query: 424 RLVGKSLVTIS---NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN- 479
            LV KSL+ ++    + + MHDL+Q+M  EI R+ S ++PGK  RLW P+DI QV  +N 
Sbjct: 471 -LVEKSLIKLNCYGTDTVEMHDLIQDMAREIERKRSPQEPGKCKRLWLPKDIIQVFKDNT 529

Query: 480 -TSLPTGINLDS----------LKELYLGGCSNLK--------------RFPE------- 507
            TS    I LDS            E       NLK               FPE       
Sbjct: 530 GTSKIEIICLDSSISDKEETVEWNENAFMKMENLKILIIRNDKFSKGPNYFPEGLRVLEW 589

Query: 508 ----ISCNIEDLDLKETAIEELPSSI----------GNLSRLVDLDLTNCSGLKSVSSRL 553
                +C   +       I +LP S                L  L   NC  L  +   +
Sbjct: 590 HRYPSNCLPSNFHPNNLVICKLPDSCMTSFEFHGPSKKFGHLTVLKFDNCKFLTQIPD-V 648

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRLQ 612
            +L +LR L+   C  L  + + IG L  L+ L+       +  P     L+ L  L L 
Sbjct: 649 SDLPNLRELSFEECESLVAVDDSIGFLNKLKKLSAYGCSKLKSFPPL--NLTSLQTLELS 706

Query: 613 NCKRLQSLPEL 623
            C  L+  PE+
Sbjct: 707 QCSSLEYFPEI 717



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 16/154 (10%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDL-DLKETAIEELPS------SIGNLSRLVDLDLTNC 543
           L  L    C  L + P++S    DL +L+E + EE  S      SIG L++L  L    C
Sbjct: 631 LTVLKFDNCKFLTQIPDVS----DLPNLRELSFEECESLVAVDDSIGFLNKLKKLSAYGC 686

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           S LKS      NL SL+ L LS C  LE  PE IG +E++++L L     +++  S + L
Sbjct: 687 SKLKSFPP--LNLTSLQTLELSQCSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQNL 744

Query: 604 SKLSDLRLQNCKRLQ---SLPELPCGSSIHARHC 634
             L  L L++C  ++   SL  +P     H  +C
Sbjct: 745 IGLRWLTLRSCGIVKLPCSLAMMPELFEFHMEYC 778



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 37/197 (18%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           +NL SL+ L L  CS+L+ FPEI     NI+ L L    I+EL  S  NL  L  L L +
Sbjct: 695 LNLTSLQTLELSQCSSLEYFPEIIGEMENIKHLFLYGLPIKELSFSFQNLIGLRWLTLRS 754

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE-----IGNLES--------------- 582
           C G+  +   L  +  L   ++  C + + +  E     +G++ S               
Sbjct: 755 C-GIVKLPCSLAMMPELFEFHMEYCNRWQWVESEEGEKKVGSIPSSKAHRFSAKDCNLCD 813

Query: 583 ------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
                       + +LNL+  +F  +P   K+L  L  L + +C+ LQ +  LP      
Sbjct: 814 DFFLTGFKTFARVGHLNLSGNNFTILPEFFKELQLLRSLMVSDCEHLQEIRGLPPNLEYF 873

Query: 630 HARHCTSLKTLSNSSTL 646
            AR+C SL + S +  L
Sbjct: 874 DARNCASLTSSSKNMLL 890



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L+ LK+L   GCS LK FP +                      NL+ L  L+L+ CS L+
Sbjct: 675 LNKLKKLSAYGCSKLKSFPPL----------------------NLTSLQTLELSQCSSLE 712

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
                +  +++++ L L G L +++L     NL  L +L L      K+P S+  + +L 
Sbjct: 713 YFPEIIGEMENIKHLFLYG-LPIKELSFSFQNLIGLRWLTLRSCGIVKLPCSLAMMPELF 771

Query: 608 DLRLQNCKRLQ 618
           +  ++ C R Q
Sbjct: 772 EFHMEYCNRWQ 782


>gi|357499331|ref|XP_003619954.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494969|gb|AES76172.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1098

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 252/709 (35%), Positives = 367/709 (51%), Gaps = 112/709 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+ VFLSFRG D RH F  +L  AL  + I TFIDD  L RG+EI+PSL  AIE S+I I
Sbjct: 17  KYQVFLSFRGIDTRHGFTGNLYKALIDKGIHTFIDDNDLLRGDEITPSLVKAIEESRIFI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------ 115
            IFS  YASS +CL+ELV I+      G  V+PVFY VDP+                   
Sbjct: 77  PIFSANYASSSFCLDELVHIIHCYKTKGCSVLPVFYGVDPTHIRHQTGSYGEHLTKHEKK 136

Query: 116 ------------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSD 151
                                   +GY  S G+         E   IE  V DIS K++ 
Sbjct: 137 FQNNKENMQRLEQWKMALTKAANLSGYHCSQGY---------EYKFIENIVKDISDKINR 187

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
           +F    K   VG+ES +++++  L  GS  E   VG++G GG+GK+T+A AIY+ ++  F
Sbjct: 188 VFLHVAKYP-VGLESRVQQVKLLLDKGSKDEVLMVGLYGTGGMGKSTLAKAIYNFVADQF 246

Query: 211 EGSYFMQNIRDESE--------------------KVGGLANIHLNFERRRLSRMKVLIVF 250
           EG  F+ N+R+ S                     K+G ++   +   + RLSR K+L++ 
Sbjct: 247 EGVCFLHNVRENSAHNNLKHLQEELLSKTVRVNIKLGDVSE-GIPIIKERLSRKKILLIL 305

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+  L+Q++ L G LD F  GSRVIITTRD  LL  H G  +   + VK L   ++L L
Sbjct: 306 DDVDKLEQLEALAGGLDWFGCGSRVIITTRDKHLLNCH-GIEI--TYAVKGLYGTEALEL 362

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
               AF  N P+ G+ E+ +  + YA+G+PL ++V+ S L G S E+W+S ++  +++P+
Sbjct: 363 LRWMAFRDNVPS-GYEEILSRAVSYASGLPLVIEVVASNLFGKSIEKWKSTLDGYEKIPN 421

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKS 429
             IQ++LKVSYD L++EEQ++FLD ACFFKG     V   L A      K  +  LV KS
Sbjct: 422 KKIQEILKVSYDDLEEEEQSVFLDIACFFKGCRLSEVEETLLAHYGHCIKHHVGVLVEKS 481

Query: 430 LVTIS-------NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
           L+ I+       N+ + +HDL+++MG EIVRQES K+PG+RSRLW   DI  VL ++T  
Sbjct: 482 LIEINTQSHRSYNDDVALHDLIEDMGKEIVRQESSKEPGERSRLWCHNDIVHVLQKDTG- 540

Query: 483 PTGINLDSLKELYLGGCS-------NLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
                  +++ +YL   S       N K F +++ N++ L ++     + P  + +  R 
Sbjct: 541 -----TSNIEMIYLNCPSMETIIDWNGKPFRKMT-NLKTLIIENGRFSKGPKHLPSSLRF 594

Query: 536 VDLDLTNCSGLKSVSSRLCN--LKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEK 591
             L    C   KS+SS + N    +++ + L  C  L  +P   G  NLE   + N A  
Sbjct: 595 --LKWKGCPS-KSLSSCISNKEFNNMKFMTLDDCEYLTHIPNVSGLSNLEKFSFRNCA-- 649

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP--ELPCGSSIHARHCTSLK 638
           +   I +S+  L+KL  L    C+++ S P   LP         C SLK
Sbjct: 650 NLITIHNSVGYLNKLEILDAYGCRKIVSFPPLRLPSLKEFQLSWCKSLK 698



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 11/170 (6%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETA-IEELPSSIGNLSRL 535
            S P  + L SLKE  L  C +LK+FPE+ C   NI ++ L E   +EE P    NLS L
Sbjct: 676 VSFPP-LRLPSLKEFQLSWCKSLKKFPELLCKMSNIREIQLIECLDVEEFPFPFQNLSEL 734

Query: 536 VDLDLTNCSGLKSVSS----RLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAE 590
            DL +  C  L+              +++ L+L+   L  + LP  +    +++YLNL++
Sbjct: 735 SDLVINRCEMLRFPRHDDKLDFIVFSNVQMLDLNNSNLSDDCLPILLKWCVNVKYLNLSK 794

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
            +F+ +P  + +   L  L L  C+ L+ +  +P     + A +C SL +
Sbjct: 795 NNFKILPECLSECHLLKHLYLDKCQYLEEIRGIPQNLEHLDAVNCYSLTS 844


>gi|227438221|gb|ACP30600.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 909

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 242/760 (31%), Positives = 366/760 (48%), Gaps = 157/760 (20%)

Query: 13  HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKIS 72
           H +H VF SF G+DVR  F+SHL     R+ I TFID+ + R   I P L  AI  S+ +
Sbjct: 10  HWRHHVFPSFSGEDVRRTFLSHLLKEFRRKGIRTFIDNDIKRSQLIGPELVQAIRESRFA 69

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG--------------- 117
           +V+ S+ YASSRWCLNELV+I ES       V+PVFY V+PSD                 
Sbjct: 70  VVVLSKRYASSRWCLNELVEIKESSKN----VMPVFYEVNPSDVRNLSGEFGTAFEEACQ 125

Query: 118 ---------YCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                    +  +L ++      +S     E+ +IE     IS +L+   PS + D LVG
Sbjct: 126 GKPEDVKQRWRQALVYVANIAGESSQNWDNEADMIEKIAMSISSELNSA-PSGDSDNLVG 184

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           + + + E++S L   S E   VGIWG  GIGKTT+A A++  +S  F+ S F++N +   
Sbjct: 185 INAHMSEMDSLLCLESNEVKMVGIWGPAGIGKTTVARALFKQLSVSFQHSIFVENFKGSY 244

Query: 224 EKVG----GLA-----------------NIH-LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            + G    G                    IH L   + RL  +KVL+V  D+  L+Q+D 
Sbjct: 245 RRTGLDEYGFKLRLQEQFLSEVIDHKHMKIHDLGLVKERLQDLKVLVVLDDVDRLEQLDA 304

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+ +   F PGSR+I+TT + QLL+ H    +  ++++   S ++SL +F ++AFG++  
Sbjct: 305 LVKQSQWFGPGSRIIVTTENKQLLRAHG---IKLIYQMGFPSKSESLEIFCQSAFGKSSA 361

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             G++EL+  + K A  +PLAL+VLGS L+GM+++E ++A+ +L+     DI+ VL+V Y
Sbjct: 362 PDGYIELATEITKLAGYLPLALKVLGSSLRGMNKDEQKAALPRLRTSLSEDIRNVLRVGY 421

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI--SNNKIT 439
           DGL D++++IFL  AC F G +   V   L +       G+  L  +SL+ I   N  I 
Sbjct: 422 DGLHDKDKSIFLYVACLFSGENVEYVKLLLASSGLDVNFGLQVLTNRSLIYILRCNRTIM 481

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKELY 495
           MH LLQ +G E+V  +SI +PGKR  L    +IY VL +NT      GI+LD  ++ E +
Sbjct: 482 MHSLLQHLGREVVCAQSIDEPGKRQFLVDASEIYDVLVDNTGTAALLGISLDISTINEWF 541

Query: 496 L-----GGCSNL-----------------------------------KRFPEISCNIE-- 513
           L     GG  NL                                     +P  S  +   
Sbjct: 542 LNERSFGGMHNLMFLKFYKSSLGKNQTELHLPRGLDYLPRKLRLLHWDTYPTTSLPLSFR 601

Query: 514 -----DLDLKETAIEELPSSIGNLSRLVDLD-----------------------LTNCSG 545
                 L+L+E+ +E+L      L  L  +D                       L++CS 
Sbjct: 602 PEFLVVLNLRESKLEKLWEGEQPLRSLTHMDLSMSENLKEIPDLSKAVNMEELCLSHCSS 661

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE--------------------- 584
           L  +   + NL  L  L +  C KLE +P+ I NLESL                      
Sbjct: 662 LVMLPPSVKNLNKLVVLEMECCSKLESIPKNI-NLESLSILNLDKCSRLTTFPDVSSNIG 720

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           YL+++E   E++P ++     L+ L +  C  L++ P LP
Sbjct: 721 YLSISETAIEQVPETIMSWPNLAALDMSGCTNLKTFPCLP 760



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 27/140 (19%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           S+P  INL+SL  L L  CS L  FP++S NI  L + ETAIE++P +I +   L  LD+
Sbjct: 688 SIPKNINLESLSILNLDKCSRLTTFPDVSSNIGYLSISETAIEQVPETIMSWPNLAALDM 747

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           + C+ LK+                  CL             ++E+L+ +  + E++PS +
Sbjct: 748 SGCTNLKTFP----------------CLP-----------NTIEWLDFSRTEIEEVPSRV 780

Query: 601 KQLSKLSDLRLQNCKRLQSL 620
           + L +LS L + +C +L+S+
Sbjct: 781 QNLYRLSKLLMNSCMKLRSI 800



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 55/94 (58%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
           T ++  +L  L + GC+NLK FP +   IE LD   T IEE+PS + NL RL  L + +C
Sbjct: 735 TIMSWPNLAALDMSGCTNLKTFPCLPNTIEWLDFSRTEIEEVPSRVQNLYRLSKLLMNSC 794

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
             L+S+SS +  L+++  L+  GC  +   P EI
Sbjct: 795 MKLRSISSGISRLENIETLDFLGCKNVVNYPVEI 828


>gi|154424270|gb|ABS82020.1| TAO1 [Arabidopsis thaliana]
          Length = 1140

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 245/752 (32%), Positives = 368/752 (48%), Gaps = 121/752 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VFLSFRG+DVR   +SH+     R  I  FID+++ RG  I P L  AI GSKI+I++
Sbjct: 40  HPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEMKRGGSIGPELLQAIRGSKIAIIL 99

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------GYC 119
            S  Y SS+WCL+ELV+I++ + + GQ V+ VFY VDPSD                 G  
Sbjct: 100 LSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFKKTCVGRP 159

Query: 120 PSLGWMGIFDIPTSESVLIEGNVN---------DISKKLSDLF---PSDNKDQLVGVESI 167
             +       + ++ ++L E + N          ISK +SD+    PS + D+ VG+E+ 
Sbjct: 160 EEMVQRWKQALTSAANILGEDSRNWENEADMIIKISKDVSDVLSFTPSKDFDEFVGIEAH 219

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR------- 220
             EI S L     E   +GIWG  GIGKTTI+  +Y+ +   F+    + NI+       
Sbjct: 220 TTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPC 279

Query: 221 -DE--------SEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
            DE         E +  + N       HL   + RL   KVL+V  D+  L Q+D +   
Sbjct: 280 HDEYSAKLQLQKELLSQMINQKDMVVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKD 339

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
           +  F  GSR+I+ T+D++LLK H    + ++++V   + +++L +F   AFG+  P  GF
Sbjct: 340 VQWFGLGSRIIVVTQDLKLLKAHG---IKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGF 396

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            +++  V   A  +PL L+V+GSYL+ MS++EW  ++ +L+     DI+ VLK SY+ L 
Sbjct: 397 EQIARTVTTLAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLA 456

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           ++E+++FL   CFF+      +  FL       + G+  L  KSL++++   I MH+LL 
Sbjct: 457 EQEKDLFLHITCFFRRERIETLEVFLAKKSVDVRQGLQILADKSLLSLNLGNIEMHNLLV 516

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNL-KR 504
           ++G +IVR++SI  PGKR  L   EDI +VL ++T   T I +D      + G  N+ +R
Sbjct: 517 QLGLDIVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISER 576

Query: 505 FPEISCNIEDLDLKETA------IEELPSSIGNLSRLVDL-------------------- 538
             E  CN++ L            I  LP  + ++SR + L                    
Sbjct: 577 AFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFL 636

Query: 539 --------------------------DLTNCSGLKSVS--SRLCNLKSLRRLNLSGCLKL 570
                                     DL+ C  LK +   S   NL+ LR +N   CL L
Sbjct: 637 VKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLIN---CLSL 693

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
            +LP  IGN  +L  L+L +     K+PSS+  L+ L  L L  C  L  LP     SS 
Sbjct: 694 VELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLP-----SSF 748

Query: 630 HARHCTSLK--TLSNSSTLLTRSSKHWDIFNF 659
              + TSLK   LS  S+LL   S   +I N 
Sbjct: 749 G--NVTSLKELNLSGCSSLLEIPSSIGNIVNL 778



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 109/222 (49%), Gaps = 49/222 (22%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE------TAIEELPSSIGNLSR 534
           LP+   N+ SLKEL L GCS+L   P    NI  ++LK+      +++ +LPSSIGN + 
Sbjct: 744 LPSSFGNVTSLKELNLSGCSSLLEIPSSIGNI--VNLKKVYADGCSSLVQLPSSIGNNTN 801

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE---- 590
           L +L L NCS L    S + NL  L  LNLSGCL L KLP  IGN+ +L+ L L++    
Sbjct: 802 LKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPS-IGNVINLQSLYLSDCSSL 860

Query: 591 ---------------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
                                 +  ++PSS+  ++ L  L L  C  L+ LP L      
Sbjct: 861 MELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPSL------ 914

Query: 630 HARHCTSLKTLS--NSSTLLTRSSKHWDIFNF-----SNCSN 664
              +  +L++LS    S+L+   S  W I N      SNCS+
Sbjct: 915 -VENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSS 955



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 102/217 (47%), Gaps = 40/217 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP      +L+EL L  C +L   P     + N+ +LDL + +++ +LPSSIGNL+ L  
Sbjct: 673 LPDFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKK 732

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL----------- 586
           L L  CS L  + S   N+ SL+ LNLSGC  L ++P  IGN+ +L+ +           
Sbjct: 733 LFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQL 792

Query: 587 --------NLAE------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS----- 627
                   NL E          + PSSM  L++L DL L  C  L  LP +  G+     
Sbjct: 793 PSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSI--GNVINLQ 850

Query: 628 SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           S++   C+SL  L  +      ++ + D      CSN
Sbjct: 851 SLYLSDCSSLMELPFT----IENATNLDTLYLDGCSN 883



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 9/161 (5%)

Query: 486 INLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTN 542
           +NL  L++L L GC +L + P I    N++ L L + +++ ELP +I N + L  L L  
Sbjct: 821 LNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDG 880

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMK 601
           CS L  + S + N+ +L+ L L+GC  L++LP  + N  +L+ L+L +     ++PSS+ 
Sbjct: 881 CSNLLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIW 940

Query: 602 QLSKLSDLRLQNCKRLQSL-----PELPCGSSIHARHCTSL 637
           ++S LS L + NC  L  L     P +P    + A  C SL
Sbjct: 941 RISNLSYLDVSNCSSLLELNLVSHPVVPDSLILDAGDCESL 981


>gi|240256307|ref|NP_197336.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005159|gb|AED92542.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1245

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 259/799 (32%), Positives = 377/799 (47%), Gaps = 160/799 (20%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPS 61
           ASSS S        H VFLSFRG+DVR  F+SH+     R+ I  F+D K+ RG+ I P 
Sbjct: 6   ASSSLSSTPTRTWTHHVFLSFRGEDVRKGFLSHIQKEFERKGIFPFVDTKMKRGSSIGPV 65

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----- 116
           LS AI  SKI+IV+ S+ YASS WCLNELV I++ + ++GQ V+ VFY VDPSD      
Sbjct: 66  LSDAIIVSKIAIVLLSKNYASSTWCLNELVNIMKCREEFGQTVMTVFYEVDPSDVRKQTG 125

Query: 117 --GYCPSLGWMG----------------------IFDIPTSESVLIEGNVNDISKKLSDL 152
             G       +G                      ++ I + ES LI+    D+  +L+  
Sbjct: 126 DFGIAFETTCVGKTEEVKQSWRQALIDVSNIVGEVYRIWSKESDLIDKIAEDVLDELNYT 185

Query: 153 FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
              D  D  VG+   +++++S L   S +   +GI G  GIGKTTIA A+   IS +F+ 
Sbjct: 186 MSRDF-DGYVGIGRHMRKMKSLLCLESGDVRMIGIVGPPGIGKTTIARALRDQISENFQL 244

Query: 213 SYFMQNIR---------------------DESEKVGGLAN------------IH-LNFER 238
           + F+ +IR                     D+  K+    N            IH LN   
Sbjct: 245 TAFIDDIRLTYPRRCYGESGLKPPTAFMNDDRRKIVLQTNFLSEILNQKDIVIHNLNAAP 304

Query: 239 RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFE 298
             L   KVL++  D+  L+Q+D +      F  GSR+IITT+D +LLK H    + +++E
Sbjct: 305 NWLKDRKVLVILDDVDHLEQLDAMAKETGWFGYGSRIIITTQDRKLLKAH---NIDYIYE 361

Query: 299 VKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEW 358
           V     +D+L +F  +AFGQN P   F  L+  V + A  +PL L+VLGSYLKGMS EEW
Sbjct: 362 VGLPRKDDALQIFCLSAFGQNFPHDDFQYLACEVTQLAGELPLGLKVLGSYLKGMSLEEW 421

Query: 359 ESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA 418
           ++A+ +LK     DI+K L+ SYD L  ++Q +FL  AC F+G +   V  +L       
Sbjct: 422 KNALPRLKTCLDGDIEKTLRYSYDALSRKDQALFLHIACLFRGYEVGHVKQWLGKSDLDV 481

Query: 419 KIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
             G+  L  KSL++I    + MH LLQ++G EIVR +S ++P +R  L    DI  V   
Sbjct: 482 DHGLDVLRQKSLISIDMGFLNMHSLLQQLGVEIVRNQSSQEPRERQFLVDVNDISDVFTY 541

Query: 479 NT----------------------------------------------SLPTGINL--DS 490
           NT                                              SLP G+N     
Sbjct: 542 NTAGTKSILGIRLNVPEIEEKIVIDELVFDGMTNLQFLFVNEGFGDKLSLPRGLNCLPGK 601

Query: 491 LKELYLGGCSNLKRFP-EISCN-IEDLDLKETAIEELPSSIGNLSRLVDLDLTN------ 542
           L+ L+   C  L+ +P + S N + +L ++    E+L   I  L  L  +DL++      
Sbjct: 602 LRVLHWNYCP-LRLWPSKFSANFLVELVMRGNNFEKLWEKILPLKSLKRMDLSHSKDLKE 660

Query: 543 -----------------CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
                            CSGL  ++  +    +L+RL L+ C  L+KLP  IG+  +L+ 
Sbjct: 661 IPDLSNATNLEELDLSSCSGLLELTDSIGKATNLKRLKLACCSLLKKLPSSIGDATNLQV 720

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL------PELPCGS----------- 627
           L+L   + FE++P S+ +L+ L  L L  C +L +L      P+LP  S           
Sbjct: 721 LDLFHCESFEELPKSIGKLTNLKVLELMRCYKLVTLPNSIKTPKLPVLSMSECEDLQAFP 780

Query: 628 -SIHARHCTSLKTLSNSST 645
             I+   CT LK     ST
Sbjct: 781 TYINLEDCTQLKMFPEIST 799



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 109/256 (42%), Gaps = 88/256 (34%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            + PT INL+         C+ LK FPEIS N+++LDL+ TAIE +PSSI + S L  LD+
Sbjct: 778  AFPTYINLED--------CTQLKMFPEISTNVKELDLRNTAIENVPSSICSWSCLYRLDM 829

Query: 541  TNCSGLK--------------------SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
            + C  LK                     V S + NL  LR L + GC +L  +   I  L
Sbjct: 830  SECRNLKEFPNVPVSIVELDLSKTEIEEVPSWIENLLLLRTLTMVGCKRLNIISPNISKL 889

Query: 581  ESLEYLNLAEK------------------------------------------------- 591
            ++LE L L                                                    
Sbjct: 890  KNLEDLELFTDGVSGDAASFYAFVEFSDRHDWTLESDFQVHYILPICLPKMAISLRFWSY 949

Query: 592  DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTLSNSSTLLTR 649
            DFE IP  +  L  LS+L +  C+ L SLP+LP GS  S+ A +C SL+ ++        
Sbjct: 950  DFETIPDCINCLPGLSELDVSGCRNLVSLPQLP-GSLLSLDANNCESLERING------- 1001

Query: 650  SSKHWDI-FNFSNCSN 664
            S ++ +I  NF+NC N
Sbjct: 1002 SFQNPEICLNFANCIN 1017



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 21/153 (13%)

Query: 490 SLKELYLGGCSNLKRFPEI---SCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSG 545
           +LK L L  CS LK+ P     + N++ LDL    + EELP SIG L+ L  L+L  C  
Sbjct: 693 NLKRLKLACCSLLKKLPSSIGDATNLQVLDLFHCESFEELPKSIGKLTNLKVLELMRCYK 752

Query: 546 LKSVSSRL------------C-NLKSL-RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
           L ++ + +            C +L++    +NL  C +L+  PE   N++ L+  N A  
Sbjct: 753 LVTLPNSIKTPKLPVLSMSECEDLQAFPTYINLEDCTQLKMFPEISTNVKELDLRNTA-- 810

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             E +PSS+   S L  L +  C+ L+  P +P
Sbjct: 811 -IENVPSSICSWSCLYRLDMSECRNLKEFPNVP 842


>gi|255553307|ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
 gi|223543328|gb|EEF44860.1| TMV resistance protein N, putative [Ricinus communis]
          Length = 1186

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 205/521 (39%), Positives = 281/521 (53%), Gaps = 62/521 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D R NF  HL  AL +E I TF DD ++ RG +I   +  AI  SK+S++
Sbjct: 20  YHVFLSFRGGDTRKNFTDHLYTALVQEGIHTFRDDDEIKRGEDIELEIQRAITESKLSVI 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP-----SDAGY----------- 118
           + S+ YASSRWCL+ELV I+E +   G +VVPVFY V+P         Y           
Sbjct: 80  VLSKDYASSRWCLDELVLIMERRKLVGHVVVPVFYDVEPYQVRNQTGSYGEAFAKHEKDF 139

Query: 119 ----------------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                              LG M + D    ES  I+  V ++  KLS          LV
Sbjct: 140 KEDMSRVEEWRAALKEAAELGGMVLQD--GYESQFIQTIVKEVENKLSRTVLH-VAPYLV 196

Query: 163 GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           G ES +  I   L  GS +     I+GIGGIGKTTIA  +Y+     F+G  F+ N+++ 
Sbjct: 197 GTESRMARITRWLRDGSDDVEIATIYGIGGIGKTTIAKIVYNQNFRSFDGRSFLANVKEI 256

Query: 223 SEKVGGLANIHLNFERRRLSR------------MKVLIVFYD---------LTDLKQIDL 261
           SE+  GLA +        L +            MK+    +          + DL+Q + 
Sbjct: 257 SEQPNGLARLQRQLLSDLLKKNTSKIYNVDEGIMKIKDALFQKRVLLILDDVDDLEQFNA 316

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           ++   +   PGS++IITTR   L        +   FEV++L+  +SL LF  +AF Q+HP
Sbjct: 317 IVAMREWCHPGSKIIITTRHEHL---QGVDGICRRFEVEKLNDKESLQLFCWHAFRQDHP 373

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           A G+ + S  V+ +  G+PLALQVLGS L G +   WESA+ KL+++    IQ +L++S+
Sbjct: 374 ADGYEKHSKDVVHHCGGLPLALQVLGSSLSGKTVSVWESALEKLEKVADSKIQHILRISF 433

Query: 382 DGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KIT 439
           D L DD ++ +FLD ACFF G D   V   LD C F A IGI  L+ + L+TIS+  K+ 
Sbjct: 434 DSLQDDHDKRLFLDIACFFTGMDIGYVFRILDGCGFYAVIGIQNLIDRCLITISDKYKLM 493

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           MH LL +MG EIVRQES  DPGKRSRLW P+D  +VL +NT
Sbjct: 494 MHQLLGDMGREIVRQESPDDPGKRSRLWDPKDATKVLRQNT 534



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 92/182 (50%), Gaps = 19/182 (10%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD-LKETAIEELP----SSIGNLSRL 535
           LP  I  L SL+EL L GC NL   P+   ++E+L  L+   ++ +P    +SI    + 
Sbjct: 732 LPVEITMLHSLEELILSGCLNLVELPK---DLENLQSLRVLHLDGIPMNQVNSITEDFKE 788

Query: 536 VDLDLTNCSGLKSVSSRLC----NLKSLRRLNLS-----GCLKLEKLPEEIGNLESLEYL 586
           + L L + +    +  R      +L SL R  +S      CL    +P ++  L SLEYL
Sbjct: 789 LSLSLQHLTSRSWLLQRWAKSRFSLSSLPRFLVSLSLADCCLSDNVIPGDLSCLPSLEYL 848

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSST 645
           NL+   F  +P S+  L  L  L L  C  L+S+PELP   +S+ A  CTSL+ ++N   
Sbjct: 849 NLSGNPFRFLPESINSLGMLHSLVLDRCISLKSIPELPTDLNSLKAEDCTSLERITNLPN 908

Query: 646 LL 647
           LL
Sbjct: 909 LL 910



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 13/150 (8%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L  LK L L     L R P  +    +E L LK+   + ++  SIG L +L+  +L +C 
Sbjct: 668 LVELKVLNLSHSHGLVRTPNFTGLPTLEKLVLKDCKDLVDVDKSIGGLDKLIIFNLKDCK 727

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL----------AEKDFE 594
            LK +   +  L SL  L LSGCL L +LP+++ NL+SL  L+L            +DF+
Sbjct: 728 NLKKLPVEITMLHSLEELILSGCLNLVELPKDLENLQSLRVLHLDGIPMNQVNSITEDFK 787

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           ++  S++ L+  S L  +  K   SL  LP
Sbjct: 788 ELSLSLQHLTSRSWLLQRWAKSRFSLSSLP 817


>gi|224105385|ref|XP_002333825.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838630|gb|EEE76995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 920

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 223/679 (32%), Positives = 356/679 (52%), Gaps = 97/679 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFR KD R+NF SHL + L +  ++ ++DD+ L RG  I P+L  AIE S+ S++
Sbjct: 2   YDVFLSFRDKDTRNNFTSHLYSNLKQRGVDVYMDDRELERGKTIEPALWKAIEESRFSVI 61

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVD---PSDAGYCPSLGWMGIFDIP 131
           IFS  YASS WCL+EL+K      K+   +  V  + D   P  A               
Sbjct: 62  IFSRDYASSPWCLDELIKQRRKMKKWVVKICVVRSVCDISAPQGAN-------------- 107

Query: 132 TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIG 191
            SES+ I      IS KLS   P+ +K +LVG++S ++ +   +     +   +GI G+G
Sbjct: 108 ESESIKIIAEY--ISYKLSITLPTISK-KLVGIDSRLQVLNGYIGEEVGKAIFIGICGMG 164

Query: 192 GIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFY 251
           G+GKTT+A  +Y  I   FEGS F+ N++++  +  G   +        L     +   Y
Sbjct: 165 GLGKTTVARVVYDRIRWQFEGSCFLANVKEDFAREDGPRRLQEQLLSEILMERASVWDSY 224

Query: 252 --------------------DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGS 291
                               D+ + +Q++ L      F PGSR+IIT+RD Q+L  +   
Sbjct: 225 RGIEMIKRRLRLKKILLILDDVDEKEQLEFLAAESKWFGPGSRIIITSRDKQVLTRNG-- 282

Query: 292 RVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLK 351
            V  ++E ++L+ +D+LTLFS+ AF  + PA  F+ELS  V+ YA G+PLAL+V+GS++ 
Sbjct: 283 -VARIYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYATGLPLALEVIGSFMH 341

Query: 352 GMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL 411
           G S  EW SA+N+L  +P  +I  VL++S+DGL + ++ IFLD ACF  G     +   L
Sbjct: 342 GRSILEWGSAINRLNDIPDREIIDVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRIL 401

Query: 412 DACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           ++  F+A IGIS L+ +SL+++S +++ MH+LLQ MG EIVR ES ++PG+RSRLW  +D
Sbjct: 402 ESRGFNAGIGISVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYKD 461

Query: 472 IYQVLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS 527
           +   L +NT         +++  +KE       N+K F ++S  +  L +    + E P 
Sbjct: 462 VCLALMDNTGKEKIEAIFLDMPGIKEAQW----NMKAFSKMS-RLRLLKIHNVQLSEGPE 516

Query: 528 SIGN--------------------LSRLVDLDLTNCS------GLKS-VSSRLCNLK--- 557
           ++ N                    +  LV+L + N S      G KS V+ ++ NL    
Sbjct: 517 ALSNELRFLEWNSYPSKSLPACFQMDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSL 576

Query: 558 ------------SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLS 604
                       +L  L L GC  L ++   + + + L+Y+NL + K    +P+++ ++ 
Sbjct: 577 NLIKTPDLTGILNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSIRILPNNL-EME 635

Query: 605 KLSDLRLQNCKRLQSLPEL 623
            L    L  C +L+  P++
Sbjct: 636 SLKVCTLDGCSKLEKFPDI 654



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 3/143 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SLK   L GCS L++FP+I  N+  L    L ET I +L SSI +L  L  L
Sbjct: 628 LPNNLEMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLL 687

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE  +++     ++P+
Sbjct: 688 SMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPA 747

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L  L  L    C+R+  LP
Sbjct: 748 SIFLLKNLKVLSSDGCERIAKLP 770


>gi|224123358|ref|XP_002319059.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857435|gb|EEE94982.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 520

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 207/528 (39%), Positives = 291/528 (55%), Gaps = 73/528 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           HDVFLSFRG+D R NF  HL  AL +  + TF D D L RG EIS  L  AI GSKISIV
Sbjct: 1   HDVFLSFRGEDTRRNFTDHLYNALVQAGVHTFRDNDHLPRGEEISSQLLEAIRGSKISIV 60

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSL------- 122
           +FS+GYA+S WCL EL  I+  + K  Q+V+PVFY +DPSD       +  +        
Sbjct: 61  VFSKGYATSTWCLEELANIMGCRKKKHQVVLPVFYDIDPSDVRKQKRSFAEAFQTHEHFF 120

Query: 123 ---------------------GWMGIFDIPT----SESVLIEGNVNDISKKLSDLFPSDN 157
                                GW    D+ T     ES  I   V D+  KL        
Sbjct: 121 KEDMEKVNRWRKALREASTLSGW----DLNTMANRHESDFIRNIVKDVLGKLCPKRLLYC 176

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
            + LVG++S +  I + L   + +   VGI G+GGIGKTT+A  +++ +   FEGS F+ 
Sbjct: 177 PEHLVGIDSHVDNIIALLRIVTDDSRIVGIHGMGGIGKTTLAKVLFNLLDCEFEGSTFLS 236

Query: 218 NIRDESEKVGGLANIHL----------------NFER------RRLSRMKVLIVFYDLTD 255
            + D S+   GL  +                  N +R       RL   +VL+V  D+ +
Sbjct: 237 TVSDRSKAPNGLVLLQKQLLCDTLKTKNIVTINNVDRGMILITERLRCKRVLVVLDDVDN 296

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV-FEVKELSYNDSLTLFSRN 314
             Q+  L+G  + F PGS +++T+R+  LL         HV +E K L+ ++SL LFSR+
Sbjct: 297 EYQVKALVGE-NRFGPGSVIMVTSRNEHLLNRF----TVHVKYEAKLLTQDESLQLFSRH 351

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AFG  HP   + ELSN V+K A  +PLAL+VLG+ L G ++ EW SA+ KL++ P  D+Q
Sbjct: 352 AFGTTHPPEDYAELSNDVLKCACALPLALEVLGASLFGKNKSEWRSAIEKLRKTPDHDVQ 411

Query: 375 KVLKVSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVT 432
             LK+SYD LDD+  +NIFLD ACFF G ++  V   L A   F+ +I ++ LV +SL+ 
Sbjct: 412 AKLKISYDALDDDILKNIFLDIACFFVGRNKEYVSTILHARYGFNQEINLTILVQRSLLE 471

Query: 433 IS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
           ++  N++ MHDL+++MG  IV Q   + PGKRSR+W  E+ ++VLN N
Sbjct: 472 VNLQNQLRMHDLVRDMGRAIVYQMCPQHPGKRSRIWLHEEAWEVLNMN 519


>gi|15241520|ref|NP_199264.1| target of AVRB operation1 protein [Arabidopsis thaliana]
 gi|9758704|dbj|BAB09158.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007735|gb|AED95118.1| target of AVRB operation1 protein [Arabidopsis thaliana]
          Length = 1187

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 245/752 (32%), Positives = 368/752 (48%), Gaps = 121/752 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VFLSFRG+DVR   +SH+     R  I  FID+++ RG  I P L  AI GSKI+I++
Sbjct: 40  HPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDNEMKRGGSIGPELLQAIRGSKIAIIL 99

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------GYC 119
            S  Y SS+WCL+ELV+I++ + + GQ V+ VFY VDPSD                 G  
Sbjct: 100 LSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFKKTCVGRP 159

Query: 120 PSLGWMGIFDIPTSESVLIEGNVN---------DISKKLSDLF---PSDNKDQLVGVESI 167
             +       + ++ ++L E + N          ISK +SD+    PS + D+ VG+E+ 
Sbjct: 160 EEMVQRWKQALTSAANILGEDSRNWENEADMIIKISKDVSDVLSFTPSKDFDEFVGIEAH 219

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR------- 220
             EI S L     E   +GIWG  GIGKTTI+  +Y+ +   F+    + NI+       
Sbjct: 220 TTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGAIIDNIKVRYPRPC 279

Query: 221 -DE--------SEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
            DE         E +  + N       HL   + RL   KVL+V  D+  L Q+D +   
Sbjct: 280 HDEYSAKLQLQKELLSQMINQKDMVVPHLGVAQERLKDKKVLLVLDDVDGLVQLDAMAKD 339

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
           +  F  GSR+I+ T+D++LLK H    + ++++V   + +++L +F   AFG+  P  GF
Sbjct: 340 VQWFGLGSRIIVVTQDLKLLKAHG---IKYIYKVDFPTSDEALEIFCMYAFGEKSPKVGF 396

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            +++  V   A  +PL L+V+GSYL+ MS++EW  ++ +L+     DI+ VLK SY+ L 
Sbjct: 397 EQIARTVTTLAGKLPLGLRVMGSYLRRMSKQEWAKSIPRLRTSLDDDIESVLKFSYNSLA 456

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           ++E+++FL   CFF+      +  FL       + G+  L  KSL++++   I MH+LL 
Sbjct: 457 EQEKDLFLHITCFFRRERIETLEVFLAKKSVDMRQGLQILADKSLLSLNLGNIEMHNLLV 516

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNL-KR 504
           ++G +IVR++SI  PGKR  L   EDI +VL ++T   T I +D      + G  N+ +R
Sbjct: 517 QLGLDIVRKQSIHKPGKRQFLVDTEDICEVLTDDTGTRTLIGIDLELSGVIEGVINISER 576

Query: 505 FPEISCNIEDLDLKETA------IEELPSSIGNLSRLVDL-------------------- 538
             E  CN++ L            I  LP  + ++SR + L                    
Sbjct: 577 AFERMCNLQFLRFHHPYGDRCHDILYLPQGLSHISRKLRLLHWERYPLTCLPPKFNPEFL 636

Query: 539 --------------------------DLTNCSGLKSVS--SRLCNLKSLRRLNLSGCLKL 570
                                     DL+ C  LK +   S   NL+ LR +N   CL L
Sbjct: 637 VKINMRDSMLEKLWDGNEPIRNLKWMDLSFCVNLKELPDFSTATNLQELRLIN---CLSL 693

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
            +LP  IGN  +L  L+L +     K+PSS+  L+ L  L L  C  L  LP     SS 
Sbjct: 694 VELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKKLFLNRCSSLVKLP-----SSF 748

Query: 630 HARHCTSLK--TLSNSSTLLTRSSKHWDIFNF 659
              + TSLK   LS  S+LL   S   +I N 
Sbjct: 749 G--NVTSLKELNLSGCSSLLEIPSSIGNIVNL 778



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 109/222 (49%), Gaps = 49/222 (22%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE------TAIEELPSSIGNLSR 534
           LP+   N+ SLKEL L GCS+L   P    NI  ++LK+      +++ +LPSSIGN + 
Sbjct: 744 LPSSFGNVTSLKELNLSGCSSLLEIPSSIGNI--VNLKKVYADGCSSLVQLPSSIGNNTN 801

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE---- 590
           L +L L NCS L    S + NL  L  LNLSGCL L KLP  IGN+ +L+ L L++    
Sbjct: 802 LKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPS-IGNVINLQSLYLSDCSSL 860

Query: 591 ---------------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
                                 +  ++PSS+  ++ L  L L  C  L+ LP L      
Sbjct: 861 MELPFTIENATNLDTLYLDGCSNLLELPSSIWNITNLQSLYLNGCSSLKELPSL------ 914

Query: 630 HARHCTSLKTLS--NSSTLLTRSSKHWDIFNF-----SNCSN 664
              +  +L++LS    S+L+   S  W I N      SNCS+
Sbjct: 915 -VENAINLQSLSLMKCSSLVELPSSIWRISNLSYLDVSNCSS 955



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 40/217 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP      +L+EL L  C +L   P     + N+ +LDL + +++ +LPSSIGNL+ L  
Sbjct: 673 LPDFSTATNLQELRLINCLSLVELPSSIGNATNLLELDLIDCSSLVKLPSSIGNLTNLKK 732

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL----------- 586
           L L  CS L  + S   N+ SL+ LNLSGC  L ++P  IGN+ +L+ +           
Sbjct: 733 LFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSSIGNIVNLKKVYADGCSSLVQL 792

Query: 587 --------NLAE------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS----- 627
                   NL E          + PSSM  L++L DL L  C  L  LP +  G+     
Sbjct: 793 PSSIGNNTNLKELHLLNCSSLMECPSSMLNLTRLEDLNLSGCLSLVKLPSI--GNVINLQ 850

Query: 628 SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           S++   C+SL  L         ++ + D      CSN
Sbjct: 851 SLYLSDCSSLMELP----FTIENATNLDTLYLDGCSN 883



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 9/161 (5%)

Query: 486 INLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTN 542
           +NL  L++L L GC +L + P I    N++ L L + +++ ELP +I N + L  L L  
Sbjct: 821 LNLTRLEDLNLSGCLSLVKLPSIGNVINLQSLYLSDCSSLMELPFTIENATNLDTLYLDG 880

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMK 601
           CS L  + S + N+ +L+ L L+GC  L++LP  + N  +L+ L+L +     ++PSS+ 
Sbjct: 881 CSNLLELPSSIWNITNLQSLYLNGCSSLKELPSLVENAINLQSLSLMKCSSLVELPSSIW 940

Query: 602 QLSKLSDLRLQNCKRLQSL-----PELPCGSSIHARHCTSL 637
           ++S LS L + NC  L  L     P +P    + A  C SL
Sbjct: 941 RISNLSYLDVSNCSSLLELNLVSHPVVPDSLILDAGDCESL 981


>gi|302398863|gb|ADL36726.1| HD domain class transcription factor [Malus x domestica]
          Length = 909

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 251/707 (35%), Positives = 359/707 (50%), Gaps = 106/707 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F  HL   L    I+TF DD +L RG  I P L  AI+ S+ +I
Sbjct: 23  KYDVFLSFRGEDTRKGFTDHLYDKLKWRAIKTFRDDPELQRGTSIHPELLMAIQQSRFAI 82

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YA+S WCL EL KIL+S ++  + ++PVFY VDPSD                  
Sbjct: 83  VVISPNYAASTWCLVELTKILQSMDE-SETILPVFYDVDPSDVRHQKGSFAEAFFKHEEK 141

Query: 117 ---------GYCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKL-SDLFPSDNKDQL 161
                    G+  +L  +      TS     E+ LI+  V  +  K+   L   D+ + L
Sbjct: 142 FREDIEKVQGWRDALTKVANLAGWTSKDYRYETELIKEIVEVVWNKVHPTLTLIDSSEML 201

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+E  +KEI   L         +GIWG+GGIGKTT+A  +Y   S +FE S F+ N+R+
Sbjct: 202 VGIEFRLKEICFLLDIAENHVCFIGIWGMGGIGKTTLARLVYEKFSHNFEVSIFLANVRE 261

Query: 222 ESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
              K  GL ++                      +   +  L   K L++  D+  L Q++
Sbjct: 262 IYAK-HGLVHLQKQLLSQILKEKDVQVWDVYSGITMAKSFLCNKKALLILDDVDQLNQLE 320

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G    F  GSR+I+TTRD  LL  H    +   +EV EL  +++  LF+  AF ++ 
Sbjct: 321 KLVGEKYWFGLGSRIIVTTRDRHLLVAHG---IEKQYEVVELDEDEAYQLFNWKAFKEDE 377

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   +LELS   +KYA G+PLAL+ LGS+L       W SA+NKLK+ P+  + ++LK+S
Sbjct: 378 PQEKYLELSKQFVKYARGLPLALRTLGSFLYKRDPYAWSSALNKLKQTPNRTVFEMLKIS 437

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           YDGLD+ E+ IFLD ACF K +D+  V+  LD+C F A+I I  LV KSL+TIS   + M
Sbjct: 438 YDGLDEMEKRIFLDIACFHKWSDKERVIEVLDSCGFCARIVIDVLVEKSLLTISGKSVCM 497

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLKE----- 493
           HDL+QEM  EIVR ES ++PG RSRLW  +DI+ VL +NT      GI L  L+E     
Sbjct: 498 HDLIQEMAWEIVRGESFEEPGARSRLWLRDDIFHVLTKNTGKKAIEGIVL-RLREFEEAH 556

Query: 494 -----------LYLGGCSNLK------------RF------------PEISCN-IEDLDL 517
                      L L    NL+            RF            P    N + +L L
Sbjct: 557 WNPEAFSKMCNLKLLDIDNLRLSVGPKYLPNALRFLKWSWYPSKFLPPGFQPNELTELSL 616

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
             + I+ L + I    +L  +DL+    L + +     L++L RL L GC  L ++   I
Sbjct: 617 PHSKIDYLWNGIKYFRKLKSIDLSYSQNL-TRTPDFTGLQNLERLVLEGCTNLVEIHPSI 675

Query: 578 GNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            +L+ L  LN    K  + +P+ +K +  L    L  C +++ +PE 
Sbjct: 676 ASLKCLRILNFRNCKSIKILPNEVK-METLEVFDLSGCSKVKKIPEF 721



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 104/211 (49%), Gaps = 52/211 (24%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSI-GNLSRLVD 537
           LP  + +++L+   L GCS +K+ PE      N+  L L  TA+EELP S  G +  L +
Sbjct: 695 LPNEVKMETLEVFDLSGCSKVKKIPEFGGQMKNVSKLYLGGTAVEELPLSFKGLIESLEE 754

Query: 538 LDLTN-----------------------CSG----------------------LKSVSSR 552
           LDLT                        C+G                      +  V + 
Sbjct: 755 LDLTGISIREPLSSIGPMKNLDLSSFHGCNGPPPQPRFSFLPSGLFPRNSLSPVNLVLAS 814

Query: 553 LCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
           L + +SL++L+LS C L    LPE+IG L SL+ LNL   +F  +P+S+  LSKLS   L
Sbjct: 815 LKDFRSLKKLDLSDCNLCDGALPEDIGCLSSLKELNLGGNNFVSLPTSIGCLSKLSFFNL 874

Query: 612 QNCKRLQSLPELPCGSSIHAR--HCTSLKTL 640
            NCKRLQ LP+LP  + I+ +  +CTSL+ L
Sbjct: 875 NNCKRLQQLPDLPLNNRIYLKTDNCTSLQML 905



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 491 LKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           LK + L    NL R P+ +   N+E L L+  T + E+  SI +L  L  L+  NC  +K
Sbjct: 634 LKSIDLSYSQNLTRTPDFTGLQNLERLVLEGCTNLVEIHPSIASLKCLRILNFRNCKSIK 693

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            + + +  +++L   +LSGC K++K+PE  G ++++  L L     E++P S K L
Sbjct: 694 ILPNEV-KMETLEVFDLSGCSKVKKIPEFGGQMKNVSKLYLGGTAVEELPLSFKGL 748


>gi|227438175|gb|ACP30577.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1235

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 235/735 (31%), Positives = 360/735 (48%), Gaps = 141/735 (19%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR +F+SH+     R+ I  FID+++ R ++I P L  AI GSKI+I++
Sbjct: 72  HHVFPSFRGEDVRKDFLSHIQMEFQRKGITPFIDNEIKRRDDIGPELIRAIRGSKIAIIL 131

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------- 115
            S  YASS+WCL+ELV+I++ + + GQ V+ +FY VDPSD                    
Sbjct: 132 LSRNYASSKWCLDELVEIMKCREELGQTVMAIFYRVDPSDVKKLAGDFGRVFKKTCAGRT 191

Query: 116 -----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                            AGY  S  W        +E+ +I+    DIS  L++  PS++ 
Sbjct: 192 KENIERWRQALAKVATIAGYHSS-NW-------DNEAAMIKKIATDISDMLNNFTPSNDF 243

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           D LVG+ + ++++E  L  GS E   +GIWG  GIGKTTIA   YS +S++F+ S FM +
Sbjct: 244 DGLVGMGAHLEKMEPLLCLGSDEVRMIGIWGPPGIGKTTIARVAYSKLSNNFQLSVFMDD 303

Query: 219 IR---------DESEKV-------------GGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
           ++         D S K+               +   HL     RL   KVL+V   +   
Sbjct: 304 LKANYTRLCSDDYSLKLQLQQQFMSQITNQKDMVVSHLGVASNRLKDKKVLVVLDGVDQS 363

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q++ +      F PGSR+IIT +D +L + H    V  +++V   + +++L +F   +F
Sbjct: 364 VQLEAMAKETWWFGPGSRIIITAQDQKLFRAHG---VNLIYKVNFPTDDEALQIFCTYSF 420

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           GQ  P  GF EL+  V + A  +PL L+V+GSY +GMS++EW +++ +LK     DI+ +
Sbjct: 421 GQKSPKDGFEELAREVTRLAGELPLGLRVMGSYFRGMSKQEWTNSLPRLKTSLDSDIRSI 480

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           LK SYD LDDE++++FL  ACFF   + + V   L       +  ++ L  KSL++I + 
Sbjct: 481 LKFSYDALDDEDKDLFLHIACFFNSQEIHKVEEHLAKKFLEVRQRLNVLAEKSLISIDSG 540

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP---TGINLD---- 489
            ITMH LL+++G EIV ++SI +P  R  LW   +I++VL  +T+      GI L     
Sbjct: 541 VITMHSLLEKLGREIVCKQSIHEPRLRQFLWEETEIFEVLTGDTTGSKSVIGIKLKYNTE 600

Query: 490 ----SLKELYLGGCSNLK------------------------------RFPEISC----- 510
                + E    G SNL+                               FP ++C     
Sbjct: 601 GEKIEISEKAFEGMSNLQFLKVSGYSHPLQLTRGLNYISHKLRFLQWTHFP-MTCLPSIL 659

Query: 511 NIE---DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS--SRLCNLK-------- 557
           N+E   +L +  + +E+L      L  L  +DL+    LK +   S   NL+        
Sbjct: 660 NLEFLVELIMHTSKLEKLWEGTKPLRCLKWMDLSYSENLKELPDLSTATNLELDLSNCSS 719

Query: 558 ----------SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKL 606
                     SL +L + GC  L + P  I N  SL  L+L    +  ++PS +   + L
Sbjct: 720 LIKLPYLNGNSLEKLYIGGCSSLVEFPSFIENAVSLRKLDLTSYPNLLELPSYVGNATNL 779

Query: 607 SDLRLQNCKRLQSLP 621
            +L L NC  L  LP
Sbjct: 780 DELYLSNCLDLVELP 794



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 89/186 (47%), Gaps = 42/186 (22%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT INL+SL  L L  CS LK FP+IS NI DLDL  TAIE++P SI +  RL DL ++
Sbjct: 913  LPTNINLESLSWLNLRDCSMLKCFPQISTNIRDLDLTGTAIEQVPPSIRSWPRLEDLTMS 972

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                                         E L E    LE +  L L + D +++P  +K
Sbjct: 973  ---------------------------YFENLKEFPHALERITELCLTDTDIQELPPWVK 1005

Query: 602  QLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSLKTLSNSSTLLTRSSKHWDI-- 656
            Q+S L+   L+ C++L S+P  P   SI    A  C SL+ L          S H  I  
Sbjct: 1006 QISCLNSFVLKGCRKLVSIP--PISDSIRFLDASDCESLEIL--------ECSFHNQISR 1055

Query: 657  FNFSNC 662
             NF+NC
Sbjct: 1056 LNFANC 1061



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 35/170 (20%)

Query: 482 LPTGINLDSLK--------ELYLGGCSNLKRFPEISC-NIEDLDLKETAIEELPSSIGNL 532
            PT  N++SL+         L LGGCS +   P +   N+  L      + +LPS IGN 
Sbjct: 817 FPTNFNVESLEILCLAGCSSLDLGGCSTIGNVPSLRMLNLRSL----PQLLDLPSFIGNA 872

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-- 590
             L  LDL+ CS L  +   + NL+ L  L L GC KLE LP  I NLESL +LNL +  
Sbjct: 873 INLYYLDLSGCSNLVELPVFIGNLQKLYMLGLEGCSKLEFLPTNI-NLESLSWLNLRDCS 931

Query: 591 -------------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                                 E++P S++   +L DL +   + L+  P
Sbjct: 932 MLKCFPQISTNIRDLDLTGTAIEQVPPSIRSWPRLEDLTMSYFENLKEFP 981



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 6/143 (4%)

Query: 486 INLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLT 541
           +N +SL++LY+GGCS+L  FP   E + ++  LDL     + ELPS +GN + L +L L+
Sbjct: 726 LNGNSLEKLYIGGCSSLVEFPSFIENAVSLRKLDLTSYPNLLELPSYVGNATNLDELYLS 785

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           NC  L  +   L NL+ L++L L GC KLE  P    N+ESLE L LA      +     
Sbjct: 786 NCLDLVELPLSLGNLQKLKKLVLKGCSKLEVFPTNF-NVESLEILCLAGCSSLDL-GGCS 843

Query: 602 QLSKLSDLRLQNCKRLQSLPELP 624
            +  +  LR+ N + L  L +LP
Sbjct: 844 TIGNVPSLRMLNLRSLPQLLDLP 866


>gi|45544515|dbj|BAD12595.1| truncated N protein [Nicotiana tabacum]
          Length = 638

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 200/522 (38%), Positives = 299/522 (57%), Gaps = 65/522 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F SHL   L  + I+TF DDK L  G  I   L  AIE S+ +IV
Sbjct: 4   YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 63

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           +FSE YA+SRWCLNELVKI+E K ++ Q V+P+FY VDPS                +  Y
Sbjct: 64  VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 123

Query: 119 CPSLGWMGIFDIPTSESVLIEGN---------------VNDISKKLSDLFPSDNKDQLVG 163
              +  +  + I  +E+  ++G+               V+ IS KL  +  S  ++ +VG
Sbjct: 124 KDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQN-IVG 182

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI------SSHFEGSYFMQ 217
           +++ +++IES L  G      +GIWG+GG+GKTTIA AI+  +      S  F+G+ F++
Sbjct: 183 IDTHLEKIESLLEIGINGVRIMGIWGMGGVGKTTIARAIFDTLLGRMDSSYQFDGACFLK 242

Query: 218 NIRDESEKVGGLANIHLNFERR-----------------RLSRMKVLIVFYDLTDLKQ-I 259
           +I++    +  L N  L+   R                 RL   KVLIV  D+ +    +
Sbjct: 243 DIKENKRGMHSLQNALLSELLREKANYNNEEDGKHQMASRLRSKKVLIVLDDIDNKDHYL 302

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G LD F  GSR+IITTRD  L++ +       ++EV  L  ++S+ LF ++AFG+ 
Sbjct: 303 EYLAGDLDWFGNGSRIIITTRDKHLIEKN-----DIIYEVTALPDHESIQLFKQHAFGKE 357

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P   F +LS  V+ YA G+PLAL+V GS L  +   EW+SA+  +K   +  I   LK+
Sbjct: 358 VPNENFEKLSLEVVNYAKGLPLALKVWGSLLHNLRLTEWKSAIEHMKNNSYSGIIDKLKI 417

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKI 438
           SYDGL+ ++Q +FLD ACF +G ++  ++  L++C   A+ G+  L+ KSLV IS  N++
Sbjct: 418 SYDGLEPKQQEMFLDIACFLRGEEKDYILQILESCHIGAEYGLRILIDKSLVFISEYNQV 477

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            MHDL+Q+MG  IV  +  KDPG+RSRLW  +++ +V++ NT
Sbjct: 478 QMHDLIQDMGKYIVNFQ--KDPGERSRLWLAKEVEEVMSNNT 517


>gi|449482311|ref|XP_004156244.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1676

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 254/718 (35%), Positives = 358/718 (49%), Gaps = 99/718 (13%)

Query: 3    SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPS 61
            SSS S+  I     +    FRG+D R  F  HL  AL R+ I TF D+ ++  G  I  +
Sbjct: 644  SSSMSVGPISSASINEGRYFRGEDTRGGFTDHLYKALTRKGISTFRDENEIEEGEHIPSN 703

Query: 62   LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----- 116
            L ++I+ S+ +IV+ SE YASSRWCL EL ++ E K +    V+P+FY VDPS       
Sbjct: 704  LLASIDASRFAIVVVSEDYASSRWCLEELARMFECKKE----VLPIFYKVDPSHVKNQSG 759

Query: 117  ---------------GYCPSLGWMGIF-----------DIPTSESVLIEGNVNDISKKLS 150
                           G      W                  + ES +IE     I K+L 
Sbjct: 760  RFEEAFVKHEKRFGRGDGKVQSWRTFLTELANTKAWLSQSWSHESNIIEEITTKIWKRLK 819

Query: 151  DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNT------VGIWGIGGIGKTTIASAIYS 204
                   +DQLVG+ S I ++ S L+  S + +       VGI G+GGIGKTTIA   Y 
Sbjct: 820  PNLTVIKEDQLVGINSKINKLSSLLIPNSDDDDADDDVIFVGIHGMGGIGKTTIARVCYE 879

Query: 205  NISSHFEGSYFMQNIRDESEKVGG---------------LANIH-LNFER------RRLS 242
             I   FE   F+ N+R+   +  G               L N H ++ E       + + 
Sbjct: 880  RIRDEFEAHCFLSNVRENYIRTLGNLSCLQTKLLSSMFSLKNNHIMDVEEGTAMINKAIF 939

Query: 243  RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
            R K L+V  D+    QI  LI   + F  GSRVIITTR+   L N  G  V  +FE+ EL
Sbjct: 940  RKKTLLVLDDVDSSDQIKGLIPDNNSFGNGSRVIITTRNADFLSNEFG--VKRIFEMDEL 997

Query: 303  SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
             Y ++L L S +AF +  P  G+LE S  ++K   G PLAL++LGS L+  +   W   +
Sbjct: 998  KYEEALQLLSLSAFMKTCPKEGYLEHSKKIVKVVGGHPLALKLLGSSLRNKNLSVWNEVI 1057

Query: 363  NKLKRMP--HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
             ++      H  I K LKVSYDGLD+ E+ IFLD ACFF G  + +V   L+ C F AK 
Sbjct: 1058 EEVGGGGNIHEKIFKCLKVSYDGLDEREREIFLDVACFFNGKRREVVEEILNGCGFYAKT 1117

Query: 421  GISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
             I  L+ KSL+T+S +NK+ MH+LLQEMG +IVR + ++D     RL   +DI  V    
Sbjct: 1118 RIELLIQKSLLTLSYDNKLHMHNLLQEMGRKIVRDKHVRD-----RLMCHKDIKSV---- 1168

Query: 480  TSLPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLV 536
                   NL  LK + L     L + P  +   N++ L+L++ T++  +  SI    +L+
Sbjct: 1169 -------NLVELKYIKLNSSQKLSKTPNFANIPNLKRLELEDCTSLVNIHPSIFTAEKLI 1221

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L L +C  L ++ S + N+K L  L LSGC K++K+PE  GN   L  L+L       +
Sbjct: 1222 FLSLKDCINLTNLPSHI-NIKVLEVLILSGCSKVKKVPEFSGNTNRLLQLHLDGTSISNL 1280

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL--SNSSTLLTRSSK 652
            PSS+  LS L+ L L NCK L  +         +A   TSL++L  S  S L +R  K
Sbjct: 1281 PSSIASLSHLTILSLANCKMLIDIS--------NAIEMTSLQSLDVSGCSKLGSRKGK 1330



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 97/233 (41%), Gaps = 75/233 (32%)

Query: 480  TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            T+LP+ IN+  L+ L L GCS +K+ PE S N      L L  T+I  LPSSI +LS L 
Sbjct: 1232 TNLPSHINIKVLEVLILSGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASLSHLT 1291

Query: 537  -----------------------DLDLTNCSGLKSVSSR--------------------- 552
                                    LD++ CS L S   +                     
Sbjct: 1292 ILSLANCKMLIDISNAIEMTSLQSLDVSGCSKLGSRKGKGDNVELGEVNVRETTRRRRND 1351

Query: 553  ------------LCN--------------LKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
                        LCN              L SL +LNL  C  LE +P+ I  + SL  L
Sbjct: 1352 DCNNIFKEIFLWLCNTPATGIFGIPSLAGLYSLTKLNLKDC-NLEVIPQGIECMVSLVEL 1410

Query: 587  NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS-SIHARHCTSLK 638
            +L+  +F  +P+S+ +L  L  LR+  CK+L   P+LP     + ++ C SLK
Sbjct: 1411 DLSGNNFSHLPTSISRLHNLKRLRINQCKKLVHFPKLPPRILFLTSKDCISLK 1463



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 11/135 (8%)

Query: 491  LKELYLGGC----SNLKRFPEIS--CNIEDLDLKETAIEELPSSIGNLSRLVDLDLT--N 542
             KE++L  C    + +   P ++   ++  L+LK+  +E +P  I  +  LV+LDL+  N
Sbjct: 1357 FKEIFLWLCNTPATGIFGIPSLAGLYSLTKLNLKDCNLEVIPQGIECMVSLVELDLSGNN 1416

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
             S L +  SRL NLK LR       +   KLP  I  L S + ++L  KDF  I S +  
Sbjct: 1417 FSHLPTSISRLHNLKRLRINQCKKLVHFPKLPPRILFLTSKDCISL--KDFIDI-SKVDN 1473

Query: 603  LSKLSDLRLQNCKRL 617
            L  + ++ L NC ++
Sbjct: 1474 LYIMKEVNLLNCYQM 1488


>gi|15240885|ref|NP_198650.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758866|dbj|BAB09448.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006916|gb|AED94299.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1059

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 252/763 (33%), Positives = 376/763 (49%), Gaps = 129/763 (16%)

Query: 3   SSSSSINMIPHP---KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEIS 59
           +SS ++  IP     K+DVF SF G DVR  F+SH+     R+ I  FID+ ++R   I 
Sbjct: 41  ASSLALPTIPSSLSRKYDVFPSFHGADVRKTFLSHMLKEFKRKGIVPFIDNDIDRSKSIG 100

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-- 117
           P L  AI GSKI+IV+ S+ YASS WCLNELV+I + +    Q V+ +FY VDP+D    
Sbjct: 101 PELDEAIRGSKIAIVMLSKNYASSSWCLNELVEITKCRKDLNQTVMTIFYGVDPTDVKKQ 160

Query: 118 ----------YCPSLG------WMGIFD-----------IPTSESVLIEGNVNDISKKLS 150
                      C S        W  + D           I  +E+ +IE    D+S  L+
Sbjct: 161 TGEFGKVFERTCESKTEEQVKTWREVLDGAATIAGEHWHIWDNEASMIEKISIDVSNILN 220

Query: 151 DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
              PS + D L+G+E+ +++++S L   S E   +GIWG  GIGKTTIA  +Y+  S  F
Sbjct: 221 RSSPSRDFDDLIGMEAHMEKMKSLLSLHSNEVKMIGIWGPSGIGKTTIARVLYNRFSGDF 280

Query: 211 EGSYFMQNIRD--ESEKVGG--------LAN--------------IHLNFERRRLSRMKV 246
             S FM NI++   +  VG         L N               HL     RL   KV
Sbjct: 281 GLSVFMDNIKELMHTRPVGSDDYSAKLHLQNQLMSEITNHKETKITHLGVVPDRLKDNKV 340

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           LIV   +    Q+D +      F PGSR+IITT+D +LL+ H    + ++++V+  S  +
Sbjct: 341 LIVLDSIDQSIQLDAIAKETQWFGPGSRIIITTQDQKLLEAHD---INNIYKVEFPSKYE 397

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +  +F   AFGQN P  GF +L+  V      +PL L+V+GS+ + MS+++W  A+ +LK
Sbjct: 398 AFQIFCTYAFGQNFPKDGFEKLAWEVTDLLGELPLGLRVMGSHFRRMSKDDWVIALPRLK 457

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIG 421
                +IQ +LK SYD L  E++++FL  AC F        + YL ++FLD     A+ G
Sbjct: 458 TRLDANIQSILKFSYDALSPEDKDLFLHIACLFNNEEIVKVEDYLALDFLD-----ARHG 512

Query: 422 ISRLVGKSLVTIS--NNKI-TMHDLLQEMGGEIVR----QESIKDPGKRSRLWHPEDIYQ 474
           +  L  KSL+ +   N K+  MH+LL+++G EIVR      SI++P KR  L   +DI +
Sbjct: 513 LHLLAEKSLIDLEGVNYKVLKMHNLLEQLGKEIVRYHPAHHSIREPEKRQFLVDTKDICE 572

Query: 475 VLNENTSLPT--GINLD--------SLKELYLGGCSNLK--------------------- 503
           VL + T   +  GI  D        ++ E    G +NLK                     
Sbjct: 573 VLADGTGSKSIKGICFDLDNLSGRLNISERAFEGMTNLKFLRVLRDRSEKLYLPQGLNYL 632

Query: 504 ----------RFPEIS-----CN--IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
                      FP  S     C   + +L ++++ +E+L      L  L  ++L+N   L
Sbjct: 633 PKKLRLIEWDYFPMKSLPSNFCTTYLVNLHMRKSKLEKLWEGKQPLGNLKWMNLSNSRNL 692

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSK 605
           K +   L     L+ LNL+ C  L ++P  IGN  +LE LNL       ++PSS+  L K
Sbjct: 693 KELPD-LSTATKLQDLNLTRCSSLVEIPFSIGNTTNLEKLNLVMCTSLVELPSSIGSLHK 751

Query: 606 LSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           L +LRL+ C +L+ LP    L    ++    C+ LK+  + ST
Sbjct: 752 LRELRLRGCSKLEVLPTNISLESLDNLDITDCSLLKSFPDIST 794



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 91/183 (49%), Gaps = 35/183 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT I+L+SL  L +  CS LK FP+IS NI+ L L  TAI E+PS I + SR       
Sbjct: 766 LPTNISLESLDNLDITDCSLLKSFPDISTNIKHLSLARTAINEVPSRIKSWSR------- 818

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                            LR   +S     E L E    L+++  L+  +   +++P  +K
Sbjct: 819 -----------------LRYFVVSYN---ENLKESPHALDTITMLSSNDTKMQELPRWVK 858

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIF-NF 659
           ++S+L  L L+ CK L +LPELP   S+I   +C SL+ L  S        KH ++F  F
Sbjct: 859 KISRLETLMLEGCKNLVTLPELPDSLSNIGVINCESLERLDCSFY------KHPNMFIGF 912

Query: 660 SNC 662
            NC
Sbjct: 913 VNC 915


>gi|449464636|ref|XP_004150035.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1195

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 249/739 (33%), Positives = 370/739 (50%), Gaps = 119/739 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R  F+SHL+ AL RE +  FIDDKL+RG +IS SL  +IEGS+ISI+I
Sbjct: 23  YDVFLSFRGEDTRDKFISHLDLALRREGVNFFIDDKLDRGKQISKSLLKSIEGSRISIII 82

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFD------ 129
           FS+ YASS WCL+E+VKI+E      Q V+PVFY V PS+      +   GIF       
Sbjct: 83  FSQNYASSTWCLDEVVKIIECMRSKKQTVLPVFYNVSPSEV-----VKQTGIFGEAFAKY 137

Query: 130 ----------IPTSESVLIEGN-----------------VNDISKKLSDLFPS---DNKD 159
                      P  E++                      + D+ KK+S L  +   +   
Sbjct: 138 ETNPLMTNKIQPWKEALTTAATLSGWDLGNYWKNNEAHLIQDLVKKVSILKQTQLLNVAK 197

Query: 160 QLVGVESIIKEIESQLLSGSTE--FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
             V ++S +K IE     G ++   N VGI G+GGIGKTT+A A+Y+ I+  FE   F+ 
Sbjct: 198 HPVAIDSQLKAIEELASHGVSDNGVNMVGIHGMGGIGKTTLAKALYNKITYQFEACCFLS 257

Query: 218 NIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDL 256
           N+R+ SE+  GL  +                      +N  + RL   KVL+V  D+   
Sbjct: 258 NVRETSEQFNGLVQLQEKLLNEIFKDNNLKVDNVDKGMNIIKDRLCSRKVLMVLDDVDKD 317

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q+D L+G  D F  GS++I+TTRD  LL+ +   ++     ++ L  + SL LF  +AF
Sbjct: 318 DQLDALVGGRDWFGRGSKIIVTTRDRHLLETYSFDKIH---PIQLLDCDKSLELFCWHAF 374

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
            Q+HP+  + EL  +V +Y NG+PLAL +LGS L    +  W+S +++LK  P   I+ V
Sbjct: 375 KQSHPSRNYSELPELV-RYCNGLPLALVILGSLLCKRDQIIWKSKLDELKNFPEPGIEAV 433

Query: 377 LKVSYDGLDDEE--QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            ++S+  L +    + IFLD  CFF G D     N L AC    +  I  L+  SLVT+ 
Sbjct: 434 FQISFKRLPENPPVKEIFLDICCFFVGEDVSYSKNVLKACDPYLESRIIILMDLSLVTVE 493

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD--- 489
           + KI MHDL+++MG  IVR++S K P KRSRLW  ++  ++L E   T     I LD   
Sbjct: 494 DGKIQMHDLIRQMGQMIVRRKSFK-PEKRSRLWVAKEAVKMLIEKSGTHKVKAIKLDLRN 552

Query: 490 ------------SLKELYLGGCSNLKRFP----EISCNIEDLDLKETAIE-ELPSSI--- 529
                       +++ L L    N  + P    +   NI+ ++   +++    P S    
Sbjct: 553 NGSLIVEAEAFRNMENLRLLILQNAAKLPTNIFKYLPNIKWIEYSSSSVRWYFPISFVVN 612

Query: 530 GNLSRLVDLDLTN---------CSGLKSVSSRLCNL----------KSLRRLNLSGCLKL 570
           G L  LV   ++N         C  LK V      L           +L +L L  C +L
Sbjct: 613 GGLVGLVINGVSNKHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALNLEKLYLLSCKRL 672

Query: 571 EKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS- 628
           + +   + +L  L  L+L   ++ EK+PSS   L  L  L L  C +L+ +P+L   S+ 
Sbjct: 673 KMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPDLSASSNL 732

Query: 629 --IHARHCTSLKTLSNSST 645
             +H R C  L+ + +S+ 
Sbjct: 733 KELHLRECYHLRIIHDSAV 751



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 91/194 (46%), Gaps = 32/194 (16%)

Query: 484 TGINLDSLKELYLGGCSNLKRFP--------------------------EISCNIEDLDL 517
            G  LD L  L L GC  L+R P                           I+ N+E  DL
Sbjct: 751 VGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSIASNLEIFDL 810

Query: 518 KET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
           +   ++  +  S+G+L +L+ L L  C  L+ + S L  LKSL  L+L+ C K+E+LPE 
Sbjct: 811 RGCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCL-RLKSLDSLSLTNCYKIEQLPEF 869

Query: 577 IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHAR 632
             N++SL  +NL      K+P+S++ L  L +L L  C  L SLP     L     +  R
Sbjct: 870 DENMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLR 929

Query: 633 HCTSLKTLSNSSTL 646
            C+ L  L + S+L
Sbjct: 930 ECSRLDMLPSGSSL 943



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 38/193 (19%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            LP+ + L SL  L L  C  +++ PE   N++   +++LK TAI +LP+SI  L  L +L
Sbjct: 843  LPSCLRLKSLDSLSLTNCYKIEQLPEFDENMKSLREMNLKGTAIRKLPTSIRYLIGLENL 902

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP------------------------ 574
             L+ C+ L S+ S +  LKSL+ L+L  C +L+ LP                        
Sbjct: 903  ILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPSGSSLNFPQRSLCSNLTILDLQNC 962

Query: 575  --------EEIGNL-ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP- 624
                    E + N   +L+ LNL+   F  +P S+K  + L  L L+NCK L+++ ++P 
Sbjct: 963  NISNSDFLENLSNFCTTLKELNLSGNKFCCLP-SLKNFTSLRLLELRNCKFLRNIVKIPH 1021

Query: 625  CGSSIHARHCTSL 637
            C   + A  C  L
Sbjct: 1022 CLKRMDASGCELL 1034



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 36/197 (18%)

Query: 473 YQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL 532
           +++L E       +NL+   +LYL  C  LK                     +  S+ +L
Sbjct: 646 WRLLEETPDFSAALNLE---KLYLLSCKRLKM--------------------IHGSVASL 682

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
           S+LV LDL  C  L+ + S    LKSL  LNLSGC+KL+++P ++    +L+ L+L E  
Sbjct: 683 SKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIP-DLSASSNLKELHLRECY 741

Query: 593 FEKI---PSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSST 645
             +I    +  + L KL  L L+ CK L+ LP    +      ++  +C +LK +++ S 
Sbjct: 742 HLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSI 801

Query: 646 LLTRSSKHWDIFNFSNC 662
                + + +IF+   C
Sbjct: 802 -----ASNLEIFDLRGC 813


>gi|359477825|ref|XP_002282820.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1292

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 208/533 (39%), Positives = 295/533 (55%), Gaps = 69/533 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I +F DD+ L +G +I+  L  AIE S+I I+
Sbjct: 19  YDVFLSFRGGDTRKNFTDHLYTTLTAYGIHSFKDDEELEKGGDIASDLLRAIEESRIFII 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF------ 128
           IFS+ YA SRWCLNELVKI+E K++   +V+P+FY VDPSD          G F      
Sbjct: 79  IFSKNYAYSRWCLNELVKIIERKSQKESLVLPIFYHVDPSDVR-----NQKGSFGDALAC 133

Query: 129 ----------DIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSG 178
                     ++     + +    N     + D + ++   ++V   +II+ +  Q LS 
Sbjct: 134 HERDANQEKKEMVQKWRIALRKAANLCGCHVDDQYETEVVKEIVN--TIIRRLNHQPLSV 191

Query: 179 STEFNTVGIWGIGGI-------------------GKTTIASAIYSNISSHFEGSYFMQNI 219
                +V +  +  +                   GKTTIA AIY+ IS  ++GS F++NI
Sbjct: 192 GKNIVSVHLEKLKSLMNTNLNKVSVVGICGIGGVGKTTIAKAIYNEISYQYDGSSFLKNI 251

Query: 220 RDES---------EKVGGL---ANIHLN-------FERRRLSRMKVLIVFYDLTDLKQID 260
           R+ S         E + G+    N  +N         +R LS  +VL++F D+ +LKQ++
Sbjct: 252 RERSKGDILQLQQELLHGILKGKNFKVNNIDEGISMIKRCLSSNRVLVIFDDVDELKQLE 311

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L    D F   S +IIT+RD Q+L  +    V   +EV +L+  +++ +FS  AF  N 
Sbjct: 312 YLAEEKDWFEAKSTIIITSRDKQVLAQYG---VDISYEVSKLNKKEAIEVFSLWAFQHNL 368

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   +  LS  +I YANG+PLAL+VLG  L G +  EWESA+ KLK +PHM+I  VL++S
Sbjct: 369 PKEVYKNLSYNIIDYANGLPLALKVLGGSLFGKTRSEWESALCKLKTIPHMEIHNVLRIS 428

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
           +DGLDD ++ IFLD ACFFKGND+  V   L      A+ GI+ L  + L+TIS N + M
Sbjct: 429 FDGLDDVDKGIFLDVACFFKGNDKDYVSRILGP---YAEYGITTLDDRCLLTISKNMLDM 485

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKE 493
           HDL+Q+MG EI+RQE +++ G+RSRLW   D Y VL  N S PT     SLK+
Sbjct: 486 HDLIQQMGWEIIRQECLENLGRRSRLW-DSDAYHVLTRNMSDPTPACPPSLKK 537



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 93/208 (44%), Gaps = 52/208 (25%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            TSLP+ I    SL  L   GCS L+ FPEI  ++E L    L  TAI E+PSSI  L  L
Sbjct: 908  TSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMERLRKLYLDGTAIREIPSSIQRLRGL 967

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL--------- 586
              L L+ C  L ++   +CNL S + L +S C    KLP+ +G L+SLE+L         
Sbjct: 968  QSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHLFVGYLDSMN 1027

Query: 587  --------------------NLAE------------------KDFEKIPSSMKQLSKLSD 608
                                NL E                    F +IP  + QL  L  
Sbjct: 1028 FQLPSLSGLCSLRILMLQACNLREFPSEIYYLSSLVMLYLGGNHFSRIPDGISQLYNLKH 1087

Query: 609  LRLQNCKRLQSLPELPCG-SSIHARHCT 635
              L +CK LQ +PELP G + + A HCT
Sbjct: 1088 FDLSHCKMLQHIPELPSGLTYLDAHHCT 1115



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 13/125 (10%)

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           D+ E  I E P  + +L       L +C  L S+ S +   KSL  L+ SGC +LE  PE
Sbjct: 883 DMNEVPIMENPLELDSLC------LRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPE 936

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCT 635
            + ++E L  L L      +IPSS+++L  L  L L  CK L +LPE  C       + T
Sbjct: 937 IVQDMERLRKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESIC-------NLT 989

Query: 636 SLKTL 640
           S KTL
Sbjct: 990 SFKTL 994


>gi|357469133|ref|XP_003604851.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505906|gb|AES87048.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1890

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 249/743 (33%), Positives = 359/743 (48%), Gaps = 127/743 (17%)

Query: 7    SINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSS 64
            S N    PK +DVFLSF GKD    F+SHL  +L    I TF DD ++ RG+ IS SL  
Sbjct: 856  SSNKTNQPKMYDVFLSFSGKDCCTKFISHLYTSLQNAGIYTFRDDDEIQRGDRISMSLLK 915

Query: 65   AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGW 124
            AI  S+ISIV+ S  YA+SRWC+ ELVKI+E       IVVPVFY VDPS+  +    G 
Sbjct: 916  AIGRSRISIVVLSTTYANSRWCMLELVKIMEIGRTMDLIVVPVFYEVDPSEVRH--QKGK 973

Query: 125  MG-IFDIPTSESVLIEGNVNDISKKLSD------LFPSDNKDQLVGVESIIKEI------ 171
             G  F+   S   + E   +D  + LSD      +   D++++   +++I++ +      
Sbjct: 974  FGKAFEELISTISVDESTKSDWRRDLSDIGGIAGIVLIDSRNESEDIKNIVQRVTRLLDR 1033

Query: 172  ------------ESQLLSGSTEFN--------TVGIWGIGGIGKTTIASAIYSNISSHFE 211
                        ES++ + +   N         +GIWG+GG GKTTIA AIY+ I S FE
Sbjct: 1034 TELFVAEHPVGLESRVEAATKLLNIKNTKDVLILGIWGMGGTGKTTIAKAIYNQIGSEFE 1093

Query: 212  GSYFMQNIRDESEKVGGLANIHL---------------------NFERRRLSRMKVLIVF 250
            G  F+ NIR+  E      ++                       N  R+RLS+ KVL V 
Sbjct: 1094 GRSFLLNIREFWETDTNQVSLQQKVLCDVYKTTKFKIRDIESGKNILRQRLSQKKVLFVL 1153

Query: 251  YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
             D+ +L Q+  L G  + F PGSR+IITTRD+ LLK+    RV  V  ++++  ++SL L
Sbjct: 1154 DDVNELDQLKALFGSREWFGPGSRIIITTRDLHLLKS---CRVDEVCAIQDMDESESLEL 1210

Query: 311  FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
            FS +AF Q  P   F   S  V+ Y+ G                  +W+  + KL+ +P 
Sbjct: 1211 FSWHAFKQPTPTEDFATHSKDVVSYSGGFA---------------TKWQKVLEKLRCIPD 1255

Query: 371  MDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
             ++QK LKVS+DGL D  E++IFLD ACFF G D+  V+  L+ C F A IGI  LV +S
Sbjct: 1256 AEVQKKLKVSFDGLKDVTEKHIFLDIACFFIGMDRNDVIQILNGCGFFADIGIKVLVERS 1315

Query: 430  LVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI 486
            L+ I N NK+ MHDLL++MG +I+ +ES  DP KR RLW  E+++ +L++N  T    G+
Sbjct: 1316 LLIIDNRNKLRMHDLLRDMGRQIIYEESPSDPEKRGRLWRREEVFDILSKNKGTEAVKGL 1375

Query: 487  NLD------------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
             L+                   L+ L L G      F  +S  +  L      +   P+ 
Sbjct: 1376 ALEFPRKNTVSLNTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLSWHRFPLAYTPAE 1435

Query: 529  IGNLSRL-VDLDLTNCSGLKSVSSRLCNLK--------------------SLRRLNLSGC 567
                S + + L  +N   +   S  L NLK                    ++ +L L  C
Sbjct: 1436 FQQGSLIAITLKYSNLKQIWKKSQMLENLKILNLSHSQNLIETPDFTYLPNIEKLVLKDC 1495

Query: 568  LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
              L  +   IG+L  L  +NL +    + +P S+ +L  L  L L  C ++  L E    
Sbjct: 1496 PSLSTVSHSIGSLCKLLMINLTDCTGLQNLPRSIYKLKSLETLILSGCSKIDKLEE---- 1551

Query: 627  SSIHARHCTSLKTLSNSSTLLTR 649
                     SL TL    T +T+
Sbjct: 1552 ---DVEQMESLTTLIADKTAITK 1571



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 235/525 (44%), Gaps = 104/525 (19%)

Query: 6   SSINMIPHPK---HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKL-----NRGNE 57
           S+  +  +PK   +DV+LSF  +D R   +S   A   +  +  F +D+          +
Sbjct: 362 SAFKLATNPKRKIYDVYLSFYDEDSRSFVLSIYTALTSKPGVVVFWEDQWFGSEDRSSKQ 421

Query: 58  ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILE--SKNKYGQIVVPVFYLVDPSD 115
            S S  + IE  +I+++IFS+ Y  SRWCL EL KI +   +   G I + VFY     D
Sbjct: 422 PSNSALNVIEDCEIAVIIFSKNYTKSRWCLQELEKITQCCQRTTDGLIFLSVFY----DD 477

Query: 116 AGYCPSLGWM--GIFDIPTSESVLIE---------------GNVNDISKKLSDLFP---- 154
                   W+   IF     + + IE                 V + + K  +L+     
Sbjct: 478 VYSSDKRLWVRRDIFGEDFVDRISIEKETCSEDEDKFMTWVAAVTNEASKYDELYSLHCR 537

Query: 155 ---SDNKDQLVGV--------------ESIIKEIES--QLLSGSTEFNTVGIWGIGGIGK 195
               +++ +L+ +              ESI    +   QLL  S     +G+WG+ GI K
Sbjct: 538 HNSHEHESELIKIVVTRMMSKKRYQFKESIHSHAQDVIQLLKQSRSPLLLGMWGMSGISK 597

Query: 196 TTIASAIYSNISSHFEGSYFMQNIRDESEK--------------VGGLANIHLN------ 235
           +TIA AI++ I  +FE    + N+ +  E+              +GG   I +       
Sbjct: 598 STIAQAIFNQIGPYFEHKCNIDNVGEAWEQDNGQVSLQDELLCFIGGATEIKIPSVESGR 657

Query: 236 -FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
              + RL   +VL++ Y++  L+Q+  L G  D F PG ++IITT +  LLK H    V 
Sbjct: 658 IILKERLQHKRVLLLLYNVDKLEQLKALCGSRDWFGPGRKIIITTSNRHLLKEH---GVD 714

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
           H+  VKEL           N FG+             ++ Y  G+P AL+ LG  L    
Sbjct: 715 HIHRVKELD----------NKFGK-------------IVSYCGGLPFALKELGMSLYLSE 751

Query: 355 EEEWESAVNKLKR--MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
             +W++ + +++R  +P   + + L+ S   L  EE+ IF D ACFF G  Q  V+  L+
Sbjct: 752 MLDWKTVLRRIERFSIPKGSLLEALEKSLSDLYVEEKQIFFDIACFFIGMSQNDVLQTLN 811

Query: 413 ACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQES 456
                A + I+ L  KS VTI  NNK+ MH LLQ M  +I+ +ES
Sbjct: 812 RSIQRATLQINCLEDKSFVTIDENNKLQMHVLLQAMARDIINRES 856



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 161/365 (44%), Gaps = 72/365 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCRE-KIETFIDDKL-----NRGNEISPSLSSAIEG 68
           +++V+LSF  +D R +FV  +  A   E  +  F +D+       R  + S S  + I  
Sbjct: 15  RYNVYLSFCDEDSR-SFVLGIYTAFTSEPDVVVFWEDQWFESEDRRSKQPSDSTLNVIGD 73

Query: 69  SKISIVIFSEGYASSRWCLNELVKILE--SKNKYGQIVVPVFY--LVDPSDAGYCPSLGW 124
            +I +++FS+ Y +SRWCL EL KI +   +   G IV+PVFY  +         P   +
Sbjct: 74  CEIVVIVFSKNYFNSRWCLQELEKITQCCQRTMDGLIVLPVFYDGVYSSDKIVRVPRDTY 133

Query: 125 MGIFDIPTSESVLIE--------------GNVNDISKKLSDLFP----SDNKDQLVG--V 164
           +  F     + +++E                + + + K ++L P     +N+ + +   V
Sbjct: 134 VDAFHDYVDKILMLEETSSADEDKFMTWIAAITNQASKYAELDPLHCGQENESKYIKNVV 193

Query: 165 ESIIKEIES-----------------QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           E   + I                   QLL  S     +GIWG+ GIGK+TIA AIY+ I 
Sbjct: 194 EFATRMISKKRYLFRESIHSRAQDVIQLLKQSKSPLLLGIWGMTGIGKSTIAEAIYNQIG 253

Query: 208 SHFEGSYFMQNIRDESEKVGGLANIH---LNF------------------ERRRLSRMKV 246
             F+  Y + ++    E+  G  ++    L F                   + RL   +V
Sbjct: 254 PFFKHKYNIPDVMRSWEQDNGQVSLQDKLLCFICGETEIKIRTVESGRVILKERLQHKRV 313

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  ++  L+Q+  L G  D F PGS++IITT + QLL  H    V H+    +L+ N 
Sbjct: 314 LLLLDNVDKLEQLKALCGNRDWFGPGSKIIITTSNRQLLTQH---GVDHIHSAFKLATNP 370

Query: 307 SLTLF 311
              ++
Sbjct: 371 KRKIY 375



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 3/116 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
            L++LK L L    NL   P+ +   NIE L LK+  ++  +  SIG+L +L+ ++LT+C+
Sbjct: 1461 LENLKILNLSHSQNLIETPDFTYLPNIEKLVLKDCPSLSTVSHSIGSLCKLLMINLTDCT 1520

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            GL+++   +  LKSL  L LSGC K++KL E++  +ESL  L   +    K+P S+
Sbjct: 1521 GLQNLPRSIYKLKSLETLILSGCSKIDKLEEDVEQMESLTTLIADKTAITKVPFSI 1576


>gi|105922648|gb|ABF81428.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1246

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 256/753 (33%), Positives = 370/753 (49%), Gaps = 157/753 (20%)

Query: 19  FLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFS 77
             SFRGKD R+NF SHL   L +  I+ ++DD+ L RG  I P+L    E S+ S++IFS
Sbjct: 66  LFSFRGKDTRNNFTSHLYYNLAQRGIDVYMDDRELERGKTIEPALWKPFEESRFSVIIFS 125

Query: 78  EGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------AGY------ 118
             YASS WCL+ELVKI++   + GQ V+PVFY VDPS+               Y      
Sbjct: 126 RDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEFYDVDPSEVIERKRKYEEAFVE 185

Query: 119 -----------------CPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSD 156
                            C S      GW  + +   SES+ I   V  IS KLS   P+ 
Sbjct: 186 HEQNFKENLEKVRNWKDCLSTVANLSGW-DVRNRNESESIKI--IVEYISYKLSITLPTI 242

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           +K+ LVG++S ++ +   +     E   +GI+G+GGIGKTT+A  +Y      FEGS F+
Sbjct: 243 SKN-LVGIDSRLEVLNGYIGEEVGEAIFIGIYGMGGIGKTTVARVVYDRFRLQFEGSCFL 301

Query: 217 QNIRDE-SEKVGG-------LANIHLN----FERRRLSRMKVLIVFY--------DLTDL 256
            N+R+  +EK G        L+ I +     ++  R   M    +          D+ D 
Sbjct: 302 ANVREVFAEKDGPCRLQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDVDDK 361

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q++ L      F PGSR+IIT+RD Q+L  +    V  ++E ++L+ +D+L LFS+ AF
Sbjct: 362 EQLEFLAEERGWFGPGSRIIITSRDKQVLTRNG---VARIYEGEKLNDDDALMLFSQKAF 418

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
             + PA  FL+LS  V+ YA+G+PLAL+V+GS+L G S  EW  A+N++  +P  +I KV
Sbjct: 419 KNDQPAEDFLDLSKQVVGYASGLPLALEVIGSFLHGRSIPEWRGAINRMNEIPDREIIKV 478

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           L VS+DGL + E+ IFLD ACF KG     +   LD   F A IGI  L+ +SL+++S +
Sbjct: 479 LLVSFDGLHELEKKIFLDIACFLKGFKIDRITRILDGRGFHASIGIPVLIERSLISVSRD 538

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD----- 489
           ++ MH+LLQ+MG EI+R+ES ++PG+RSRLW  +D+   L +NT       I LD     
Sbjct: 539 QVWMHNLLQKMGKEIIRRESPEEPGRRSRLWTYKDVCLALMDNTGKEKVEAIFLDMPGIK 598

Query: 490 ----------SLKELYLGGCSNLKRF--PE-ISCNIEDLDLKETAIEELPSSIG------ 530
                      +  L L    N++ F  PE +S N+  L+      + LP+ +       
Sbjct: 599 EARWNMKAFSKMSRLRLLKIDNVQLFEGPEDLSNNLRFLEWHSYPSKSLPAGLQVDELVE 658

Query: 531 ------------------------------NLSRLVDLD---------LTNCSGLKSVSS 551
                                         NLS+  DL          L  C+ L  V  
Sbjct: 659 LHMANSNLEQLWYGCKSAVNLKIINLSNSLNLSQTPDLTGIPNLKSLILEGCTSLSEVHP 718

Query: 552 RLCNLKSLRRLN-----------------------LSGCLKLEKLPEEIGNLESLEYLNL 588
            L + K L+ +N                       L GC KLEK P+  GN+  L  L L
Sbjct: 719 SLAHHKKLQHVNLVNCKSIRILPNNLEMESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRL 778

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            E    K+ SS+  L  L  L + NCK L+S+P
Sbjct: 779 DETGITKLSSSIHYLIGLGLLSMNNCKNLKSIP 811



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 3/106 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SL+   L GCS L++FP+I+ N+     L L ET I +L SSI  L  L  L
Sbjct: 740 LPNNLEMESLEVCTLDGCSKLEKFPDIAGNMNCLMVLRLDETGITKLSSSIHYLIGLGLL 799

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            + NC  LKS+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE
Sbjct: 800 SMNNCKNLKSIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLE 845



 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 58   ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
            I   L  AIE S +SI+IFS   AS  WC  ELVKI+   ++     V PV Y V  S
Sbjct: 976  IRSRLFEAIEESVLSIIIFSRDCASLPWCFEELVKIVGFMDEMRSDTVFPVSYDVKES 1033


>gi|357469529|ref|XP_003605049.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506104|gb|AES87246.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1352

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 242/690 (35%), Positives = 351/690 (50%), Gaps = 83/690 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           HDVFLSFRG+  R++F  HL  +L R  I  F D+  LN G+EI  SL  AIE S+ISIV
Sbjct: 11  HDVFLSFRGR-TRYSFTDHLYRSLLRHGINVFRDNPNLNIGDEIRLSLLQAIEASRISIV 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPSDAGY--------------- 118
           +  + YASS WCL+ELVKI++   +  G+ V  +FY V+ SD  +               
Sbjct: 70  VLCKDYASSTWCLDELVKIVDCYYEMKGKTVFVIFYKVEASDVRHQRKSYEIAMIQHEKR 129

Query: 119 ------------------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                             C   G     DI  SE   IE  V DIS KL    P   K  
Sbjct: 130 FGKESEKVKKWRSALKRVCALSGLYYKDDIYESE--FIEKIVRDISAKLPPT-PLQIK-H 185

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           LVG++S  ++++S +   S     +GI+G GGIGKTT A  IY+ I   FE + F+ N+R
Sbjct: 186 LVGLDSRFEQVKSLINIDSDVVCMLGIYGAGGIGKTTFALDIYNKIRRRFEAACFLGNVR 245

Query: 221 DES-EKVGGLANIHLNFE---------------------RRRLSRMKVLIVFYDLTDLKQ 258
           ++S E   GL ++                          +RRL+R +VL++  D+  +KQ
Sbjct: 246 EKSNENTRGLEDLQRTLLSEMGEETQTMMGSTYRGSSEIKRRLARKRVLLILDDVDSVKQ 305

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L G  D F  GSR+I+TTRD+ +L  H+       ++++EL+ ++S+ LF   AF  
Sbjct: 306 LKSLAGGHDWFGSGSRIIVTTRDIDVL--HKHDVKIKTYKLEELNNHESIELFCMYAFNM 363

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           + PA  F ++S   I YA G+PL L V+GS LKG S  EW   + K +++P  +IQ VL+
Sbjct: 364 SRPAENFAKISTQAISYAQGIPLVLTVIGSNLKGKSIHEWHIELQKYRKVPDAEIQSVLE 423

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK- 437
           +SY GL D +Q +FLD ACFFKG     V   LDAC F   I +   V K L+ +  N  
Sbjct: 424 ISYKGLSDLDQKVFLDIACFFKGERWDYVKRILDACGFYPVIRV--FVSKCLLIVDENGC 481

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLKELY 495
           + MHDL+Q+MG EI+R+ES  +PG+RSRLW  +D   VL  N  ++   GI L   K+  
Sbjct: 482 LEMHDLIQDMGREIIRKESTSNPGERSRLWSHKDALDVLKGNLGSTAVEGIMLHPPKQEK 541

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
           +    +   F ++  N+  L ++ T     PS + N  RL+D     C   K        
Sbjct: 542 VDHWDDAA-FKKMK-NLRILIVRNTVFSSGPSYLPNSLRLLDW---KCYPSKDFPPNFYP 596

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA-EKDFEKIPSSMKQLSKLSDLRLQNC 614
            K +    L     + K P +I   E L ++NL+  +   +IP ++   +KL    L NC
Sbjct: 597 YK-IVDFKLPHSSMILKKPFQI--FEDLTFINLSYSQSITQIP-NLSGATKLRVFTLDNC 652

Query: 615 KRL----QSLPELPCGSSIHARHCTSLKTL 640
            +L    +S+  +P    + A  CT LK+ 
Sbjct: 653 HKLVMFDKSVGFMPNLVYLSASGCTELKSF 682



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 36/203 (17%)

Query: 477 NENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLS 533
            E  S    + L SL+ +    C   + FP +   ++    + +  TAI+E+P SIGNL+
Sbjct: 677 TELKSFVPKMYLPSLQVISFNFCKKFEHFPHVIQKMDRPLKIHMINTAIKEIPKSIGNLT 736

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL----EKLPEE------------- 576
            L  +D++ C GLK +SS    L  L  L + GC +L    ++  E              
Sbjct: 737 GLELMDMSICKGLKDLSSSFLLLPKLVTLKIDGCSQLRTSFQRFKERNSGANGYPNIETL 796

Query: 577 ---------------IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                          I N   LE L +    F  +P+ ++    L  L +  CK L  +P
Sbjct: 797 HFSGANLSNDDVNAIIENFPKLEDLKVFHNWFVSLPNCIRGSLHLKSLDVSFCKNLTEIP 856

Query: 622 ELPCG-SSIHARHCTSLKTLSNS 643
           ELP     I AR+C SL + ++S
Sbjct: 857 ELPLNIQKIDARYCQSLTSKASS 879


>gi|359477823|ref|XP_002282797.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1400

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 260/753 (34%), Positives = 378/753 (50%), Gaps = 142/753 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE S+  I+
Sbjct: 20  YDVFLSFRGSDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLFRAIEESRFFII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
           IFS+ YA SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 80  IFSKNYAYSRWCLNELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 139

Query: 125 -------MGIFDIPTSESVLIEG-NVND-----ISKKLSDLF-------PSDNKDQLVGV 164
                  +  + I   E+  + G +VND     + K++ D         P      +VG+
Sbjct: 140 NQEKMEMIQKWRIALREAANLSGCHVNDQYETQVVKEIVDTIIRRLNHHPLSVGRNIVGI 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES- 223
              +++++S + +     + VGI+GIGG+GKTTIA AIY+  S  ++G  F++NIR+ S 
Sbjct: 200 GVHLEKLKSLMNTKLNMVSVVGIYGIGGVGKTTIAKAIYNETSDQYDGRSFLRNIRERSK 259

Query: 224 --------EKVGGL---ANIHLN-------FERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
                   E + G+    N  +N         +R L+  +VL++F D+ +LKQ++ L   
Sbjct: 260 GDILQLQQELLHGILRGKNFKINNVDEGISMIKRCLTSNRVLVIFDDVDELKQLEYLAEE 319

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F   S +IITTRD  +L  + G+ +   +EV +L+  ++  LFS  AF QN P   +
Sbjct: 320 KDWFHAKSTIIITTRDKHVLAQY-GADIP--YEVSKLNKEEATELFSLWAFKQNRPQEVY 376

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             LS  +I YANG+PLAL+V+G+ L G     WESA+ KLK +PH +I  VL++S+DGLD
Sbjct: 377 KNLSYNIIDYANGLPLALKVIGASLFGKKISHWESALCKLKIIPHKEIHNVLRISFDGLD 436

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D ++ +FLD ACFFKG+D+  V   L      A+  I+ L  + L+TIS N + MHDL+Q
Sbjct: 437 DIDKGMFLDVACFFKGDDKDFVSRILGP---HAEHVITTLADRCLITISKNMLDMHDLIQ 493

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLK----------- 492
            MG E++RQE  +DPG+RSRLW   + Y VL  N  T    G+ LD  K           
Sbjct: 494 LMGWEVIRQECPEDPGRRSRLW-DSNAYHVLIGNTGTRAIEGLFLDRCKFNLSQLTTKSF 552

Query: 493 ----ELYLGGCSNLKR-----------FPEISCNIEDLDLKETAIEELP----------- 526
                L L    N +R           F   S  +  L      +E LP           
Sbjct: 553 KEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVEL 612

Query: 527 ----SSIGNLSR-------LVDLDLTNCSGLKSVS--SRLCNLK--SLRRLNLSGCLKLE 571
               S+I  L R       L  +DL+    L  +   S + NL+  +L    + GC+ LE
Sbjct: 613 LLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGCTMHGCVNLE 672

Query: 572 KLPEEI------------------------GNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           +LP  I                        GN+  L  L+L+      +PSS+  L+ L 
Sbjct: 673 RLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQ 732

Query: 608 DLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            L LQ C +L  +P       IH  H +SL+ L
Sbjct: 733 TLLLQECAKLHKIP-------IHICHLSSLEVL 758



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP GI     L+ L   GCS L+RFPEI  N+ +L   DL  TAI +LPSSI +L+ L  
Sbjct: 674 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQT 733

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKI 596
           L L  C+ L  +   +C+L SL  L+L  C  +E  +P +I +L SL+ LNL    F  I
Sbjct: 734 LLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSI 793

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P+++ QLS+L  L L +C  L+ +PELP
Sbjct: 794 PTTINQLSRLEVLNLSHCSNLEQIPELP 821



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 112/259 (43%), Gaps = 69/259 (26%)

Query: 441  HDLLQEMGGEIVR--QESIKDPGKRSRLWHPEDIYQV-LNEN---------------TSL 482
            H L  +  G  VR   E   D  +R R +   D+ +V + EN               TSL
Sbjct: 1074 HPLTTQTKGADVRICNECQCDGARRKRCFGCSDMTEVPIIENPLELDRLCLLGCKNLTSL 1133

Query: 483  PTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            P+GI N  SL  L   GCS L+ FP+I  ++E   +L L  TAI+E+PSSI  L  L   
Sbjct: 1134 PSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHF 1193

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE----------------- 581
             LTNC  L ++   +CNL SLR+L +  C    KLP+ +G L+                 
Sbjct: 1194 TLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDSMNFQL 1253

Query: 582  ------------------------------SLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
                                          SLE L LA   F +IP  + QL  L+ L L
Sbjct: 1254 PSLSGLCSLRTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDL 1313

Query: 612  QNCKRLQSLPELPCGSSIH 630
             +CK LQ +PELP G   H
Sbjct: 1314 SHCKMLQHIPELPSGVRRH 1332



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 14/152 (9%)

Query: 516  DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            D+ E  I E P  +  L       L  C  L S+ S +CN KSL  L  SGC +LE  P+
Sbjct: 1106 DMTEVPIIENPLELDRLC------LLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPD 1159

Query: 576  EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHA 631
             + ++ESL  L L     ++IPSS+++L  L    L NC  L +LP+  C       +  
Sbjct: 1160 ILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRV 1219

Query: 632  RHCTSLKTLSNS----STLLTRSSKHWDIFNF 659
              C + + L ++     +LL  S  H D  NF
Sbjct: 1220 ERCPNFRKLPDNLGRLQSLLQLSVGHLDSMNF 1251


>gi|105922664|gb|ABF81429.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1107

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 235/696 (33%), Positives = 359/696 (51%), Gaps = 133/696 (19%)

Query: 44  IETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQ 102
           I+ ++DD+ L RG  I P+L  AIE S+ S++IFS  YASS WCL+ELVKI++   + GQ
Sbjct: 96  IDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSRDYASSPWCLDELVKIVQCMKEMGQ 155

Query: 103 IVVPVFYLVD--------PSDA-----GYCPSL---------------GWMGIFDIPTSE 134
            V+PVFY VD        PS+       Y  +                 W        + 
Sbjct: 156 TVLPVFYDVDPSEFYDVDPSEVIERKRKYEEAFVEHEQNFKENLEKVRNWKDCLSTVANL 215

Query: 135 SVLIEGNVND----------ISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNT 184
           S     N N+          IS KLS   P+ NK +LV ++S ++ +   +     +   
Sbjct: 216 SGWDVRNRNELESIKIIVEYISYKLSITLPTINK-KLVAIDSRVEVLNGYIGEEVGKAIF 274

Query: 185 VGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE-SEKVGGLANIHLNFERRRLSR 243
           +GI G+GGIGKTT+A  +Y  I   FEGS F+ N+R+  +EK G          RRRL  
Sbjct: 275 IGICGMGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDG----------RRRLQE 324

Query: 244 MKVLIVFY-----------------------------DLTDLKQIDLLIGRLDGFVPGSR 274
             +  +                               D+ D +Q++ L      F PGSR
Sbjct: 325 QLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSR 384

Query: 275 VIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIK 334
           +IIT+RD +++  +  +R+   +E ++L+ +D+L LFS+ A   +HPA  F+ELS  V+ 
Sbjct: 385 IIITSRDKKVVTGNNNNRI---YEAEKLNDDDALMLFSQKASKNDHPAEDFVELSKQVVG 441

Query: 335 YANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLD 394
           YANG+PLAL+V+GS+L   S  EW+SA+N++  +PH  I  VL++S+DGL + ++ IFLD
Sbjct: 442 YANGLPLALEVIGSFLYDRSIPEWKSAINRMNEIPHGKIIDVLRISFDGLHESDKKIFLD 501

Query: 395 TACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQ 454
            ACF  G     +   L++  F A IGI  L+ KSL+++S +++ MH+LLQ MG EIVR 
Sbjct: 502 IACFLMGFKIDRITRILESRGFHAGIGIPILIEKSLISVSRDQVWMHNLLQIMGKEIVRC 561

Query: 455 ESIKDPGKRSRLWHPEDIYQVLNENT-----------------------SLPTGINLDSL 491
           ES ++PG+RSRLW  ED+   L +NT                       SLP G+ +D L
Sbjct: 562 ESPEEPGRRSRLWTYEDVCLALMDNTLSEGPEDLSNKLRFLEWHSYPSKSLPAGLQVDEL 621

Query: 492 KELYLG---------GCS--------------NLKRFPEIS--CNIEDLDLKE-TAIEEL 525
            EL++          GC               NL + P+ +   N+E+L L+  T++ E+
Sbjct: 622 VELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLIKTPDFTGIPNLENLILEGCTSLSEV 681

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
             S+    +L  ++L +C  ++ + S L  ++SL+   L GC KLE+ P+ +GN+  L  
Sbjct: 682 HPSLARHKKLQHVNLVHCQSIRILPSNL-EMESLKVFTLDGCSKLERFPDIVGNMNCLMV 740

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L L      ++ SS++ L  L  L + NCK L+S+P
Sbjct: 741 LRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIP 776


>gi|351724311|ref|NP_001237821.1| candidate disease-resistance protein [Glycine max]
 gi|223452609|gb|ACM89631.1| candidate disease-resistance protein [Glycine max]
          Length = 577

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 210/553 (37%), Positives = 310/553 (56%), Gaps = 68/553 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F  HL   L  + I TFIDD KL RG +I+P+L  AIE S+++I 
Sbjct: 14  YDVFLSFRGEDTRSAFTGHLYNTLQSKGIHTFIDDEKLQRGEQITPALMKAIEDSRVAIT 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           + SE YASS +CL+EL  IL    +   +V+PVFY VDPSD       Y  +L       
Sbjct: 74  VLSEHYASSSFCLDELATILHCDQRKRLLVIPVFYKVDPSDVRHQKGSYGEALAKLERRF 133

Query: 124 ---------W-MGIFDIPT-----------SESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                    W M +  +              E   IE  V ++S+ + +L P    D  V
Sbjct: 134 QHDPEKLQNWKMALQRVADLSGYHFKEGEGYEYKFIEKIVEEVSRVI-NLCPLHVADYPV 192

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN--ISSHFEGSYFMQNI 219
           G++S +  +   L +GS    + +GI G+GG+GK+T+A A+Y+   I+  F+G  F+ N+
Sbjct: 193 GLKSRVLHVRRLLHAGSDHGVHMIGIHGMGGVGKSTLARAVYNELIIAEKFDGLCFLANV 252

Query: 220 RDESEKVG-------------GLANIHLNFERR-------RLSRMKVLIVFYDLTDLKQI 259
           R+ S K G             G  +I L  +++       RL   KVL++  D+    Q+
Sbjct: 253 RENSNKHGLEHLQGKLLLEILGEKSISLTSKQQGISIIQSRLKGKKVLLIIDDVDTHDQL 312

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             + GR D F  GS++IITTRD QLL +H    V   +E+KEL  N +L L +  AF + 
Sbjct: 313 QAIAGRPDWFGRGSKIIITTRDKQLLASHE---VNKTYEMKELDENHALQLLTWQAFKKE 369

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                ++E+ + V+ YA+G+PLAL+V+GS+L G S +EWESA+ + KR+   +I  +LKV
Sbjct: 370 KADPTYVEVLHRVVTYASGLPLALEVIGSHLVGKSIQEWESAIKQYKRIAKKEILDILKV 429

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNK 437
           S+D L++EE+ +FLD AC FKG     + +  D C     IG+  LV KSL+ +   ++ 
Sbjct: 430 SFDALEEEEKKVFLDIACCFKGWKLTELEHVYDDC-MKNHIGV--LVEKSLIEVRWWDDA 486

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL-PTGINLDSL-KELY 495
           + MHDL+Q+MG  I +QES K+P KR RLW  +DI QVL EN+++   G ++ +    L 
Sbjct: 487 VNMHDLIQDMGRRIDQQESSKEPRKRRRLWLTKDIIQVLEENSAMRRVGGDMSACSSRLS 546

Query: 496 LGGCSNLKRFPEI 508
            GGC  L++ PEI
Sbjct: 547 RGGCI-LEKIPEI 558


>gi|357499615|ref|XP_003620096.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495111|gb|AES76314.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1104

 Score =  318 bits (816), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 246/718 (34%), Positives = 373/718 (51%), Gaps = 105/718 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+ F  +L   LC++ I TFIDD+ L  G++I+PSL  AIE S+I I 
Sbjct: 20  YDVFLSFRGSDTRYGFTGNLYKDLCKKGIRTFIDDRELPGGDKITPSLFKAIEESRIFIP 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           + S  YASS +CL+ELV I+    K G++V+P+FY V+PS+       Y  +L       
Sbjct: 80  VLSINYASSSFCLDELVHIIHCCKKNGRLVLPIFYDVEPSNVRHQIGSYGKALAEHIEKF 139

Query: 124 ------------WMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKD 159
                       W        +            E   IE  V  +S K++ + P    D
Sbjct: 140 QNSTDNMERLQKWKSALTQTANFSGHHFSSRNGYEYEFIEKIVKYLSSKINRV-PLYVAD 198

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG+ES + ++   L  GST   + +GI+G GG+GKTT+A A+Y++I+  F+   F+ +
Sbjct: 199 YPVGLESRVLKVNKFLDVGSTGVVHMLGIYGTGGMGKTTLARAVYNSIADQFDCLCFLHD 258

Query: 219 IRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           +R+ S K G                   G  N  +   ++RL R KVL++  D+ +LKQ+
Sbjct: 259 VRENSTKYGLEHLQEKLLSKLVELDIELGDINEGIPIIKKRLHRNKVLLILDDVHELKQL 318

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L G LD F PGSRVI+TTRD  LLK+H   R    +E+ +L+  ++L L   N+F  N
Sbjct: 319 QVLAGGLDWFGPGSRVIVTTRDRHLLKSHGIER---AYELPKLNETEALELLRWNSFKNN 375

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
              + F  +    + YA+G+PLAL+V+GS L G +  EW+SA+++ +R+P   IQ++LKV
Sbjct: 376 KVDSNFDGVLRCAVTYASGLPLALEVVGSNLFGNNIGEWKSALDRYRRIPIKKIQEILKV 435

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGKSLVTIS---- 434
           S+D L+ +EQN+FLD AC FKG +   + + L A   +  K  IS L  KSL+ I+    
Sbjct: 436 SFDALEKDEQNVFLDIACCFKGYNLKELEDILYAHYGNCMKYQISVLDEKSLIKINRYEG 495

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD--- 489
           N  +T+H L+++MG EIV ++S  +PG+ SRLW  +DI  VL EN  +S    I L+   
Sbjct: 496 NYVVTLHFLIEKMGKEIVNEKSPNEPGRHSRLWFHKDIIDVLEENQGSSEIEIIYLEFPS 555

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL----------- 538
           S +E+       LK+      N++ L +K       P  + N  R+++            
Sbjct: 556 SEEEVVDWEGDELKKME----NLKTLIVKNGTFSNGPKYLPNSLRVLEWPKYPSPVIPSD 611

Query: 539 ----DLTNCS---------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
                L+ C          G      R  N   +R LNL  C  L ++  ++ NL +LE 
Sbjct: 612 FCPKKLSICKLQQSDFISFGFHGTMKRFGN---VRELNLDDCQYLTRI-HDVSNLPNLEI 667

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
            +    K+  +I  S+  L+KL  L   NC +L+S P +   S   +   +CTSLKT 
Sbjct: 668 FSFQFCKNLIEIHESVGFLNKLQILNAVNCSKLRSFPAMKSASLRRLGLAYCTSLKTF 725



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 12/169 (7%)

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETA----IEELPSSIGNLSRLVDLDLTNCSG 545
           +++EL L  C  L R  ++S N+ +L++        + E+  S+G L++L  L+  NCS 
Sbjct: 641 NVRELNLDDCQYLTRIHDVS-NLPNLEIFSFQFCKNLIEIHESVGFLNKLQILNAVNCSK 699

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L+S  +      SLRRL L+ C  L+  PE +G ++++ +++L +   +K+P S + L+ 
Sbjct: 700 LRSFPAM--KSASLRRLGLAYCTSLKTFPEILGEMKNITHISLMKTSIDKLPVSFQNLTG 757

Query: 606 LSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLTRS 650
           L    ++    +Q LP     +P  S I    C   K     S++++ S
Sbjct: 758 LQIFFIEG-NVVQRLPSSIFRMPNLSKITFYRCIFPKLDDKWSSMVSTS 805



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 31/180 (17%)

Query: 490 SLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           SL+ L L  C++LK FPEI     NI  + L +T+I++LP S  NL+ L  +     + +
Sbjct: 710 SLRRLGLAYCTSLKTFPEILGEMKNITHISLMKTSIDKLPVSFQNLTGL-QIFFIEGNVV 768

Query: 547 KSVSSRLCNLKSLRRLNLSGC--------------------------LKLEKLPEEIGNL 580
           + + S +  + +L ++    C                          L  E LP  +   
Sbjct: 769 QRLPSSIFRMPNLSKITFYRCIFPKLDDKWSSMVSTSPTDIQLVKCNLSDEFLPIVVMWS 828

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
            ++E+LNL+E +F  +P  +K    L  LRL +CK L+ +  +P     + A  C SL +
Sbjct: 829 ANVEFLNLSENNFTILPECIKDCRFLWSLRLDDCKCLREIRGIPPNLKHLSAIRCKSLTS 888


>gi|357478623|ref|XP_003609597.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355510652|gb|AES91794.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 1350

 Score =  318 bits (816), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 244/695 (35%), Positives = 354/695 (50%), Gaps = 109/695 (15%)

Query: 7   SINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSS 64
           S N    PK +DVFLSFRG+D R  F+SHL ++L    I  F DD ++ RG++IS SL  
Sbjct: 204 SSNKTDQPKMYDVFLSFRGEDSRAKFISHLYSSLQNAGIYVFKDDDEIQRGDQISISLLR 263

Query: 65  AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------- 116
           AI  S+I IV+ S  YA+SRWC+ EL KI+E     G +VVPVFY VDPS+         
Sbjct: 264 AIGHSRIFIVVLSTNYANSRWCMLELEKIMEIGRTGGLVVVPVFYEVDPSEVRRREGQFG 323

Query: 117 ----GYCPSLG--------W-MGIFDIPT----------SESVLIEGNVNDISKKL--SD 151
                  P++         W   +FDI +          +ES  I+  V  +++ L  ++
Sbjct: 324 KAFEKLIPTISVDESTKSNWKRELFDIGSIAGFVLIDSRNESADIKNIVKHVTRLLDRTE 383

Query: 152 LFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
           LF +++    VGVES +  +   L +  S +   +GIWG+GG+GKTTIA AIY+ I   F
Sbjct: 384 LFVAEHP---VGVESRVDAVTKLLNIQNSEDVLLLGIWGMGGVGKTTIAKAIYNQIGRKF 440

Query: 211 EGSYFMQNIRDESEKVGGLANIHL---------------------NFERRRLSRMKVLIV 249
           +G  F+ NIR+  E      ++                       N  + RL++ +VL+V
Sbjct: 441 DGRSFLLNIREFCETDANHVSLQQQILCDVYKTTAFKIRDIESGKNILKERLAQNRVLLV 500

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ +L Q+  L G  + F PGSR+IITTRD+ LL   R SRV  V+ ++E+  ++SL 
Sbjct: 501 LDDVNELDQLKALCGSREWFGPGSRIIITTRDMHLL---RSSRVDLVYTIEEMDESESLE 557

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS +AF Q  PA GF   S  VI Y+  +PLAL+VLG YL      EW+  + KLK +P
Sbjct: 558 LFSWHAFKQPSPAEGFATHSTDVIAYSGRLPLALEVLGCYLSDCEITEWQKVLEKLKCIP 617

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           H ++QK L + ++G+                   + + +  L+ C F A IGI  LV +S
Sbjct: 618 HDEVQKNLFLDWNGI-------------------KMMQIKILNGCGFFADIGIKVLVERS 658

Query: 430 LVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI 486
           LVT+ N NK+ MHDLL++MG +I+ +ES  DP  RSRLW  E++Y VL   + T    G+
Sbjct: 659 LVTVDNRNKLRMHDLLRDMGRQIIYEESPFDPENRSRLWRREEVYDVLLKQKGTEAVKGL 718

Query: 487 NL------------------DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
            L                  + L+ L L G      F  +S  +  L      +   P+ 
Sbjct: 719 ALVFPRKNKVCLNTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLYWHGFPLTYTPAE 778

Query: 529 IGNLSRLV-DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
               S +V  L  +N   LK +      LK+L+ LNLS  L L + P +   + +LE L 
Sbjct: 779 FQQGSLIVIQLKYSN---LKQIWKEGQMLKNLKILNLSHSLDLTETP-DFSYMPNLEKLV 834

Query: 588 LAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L +      +  S+  L KL  + L +C RL+ LP
Sbjct: 835 LKDCPSLSTVSHSIGSLHKLLLINLTDCIRLRKLP 869



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 107/195 (54%), Gaps = 13/195 (6%)

Query: 273 SRVIITTR--------DVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           +RV+I T+          Q  K     RV  VF  K     + L+ F+  AF Q     G
Sbjct: 12  TRVLICTKLMKDLEIDQFQFAKASNKIRV--VFLYKLSRKVNRLSFFNWGAFSQATTPQG 69

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM--PHMDIQKVLKVSYD 382
           F ELS  ++ Y+ G+PLAL+ LG +L G    EW+  +  L+R   P  ++ + L+ S+D
Sbjct: 70  FSELSRQLVAYSKGLPLALKALGEFLHGKDALEWKRVLKSLERFSFPDQEVLQALETSFD 129

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMH 441
            L DEE++IFLD ACFF G DQ  V+  ++       + IS L  KSL+TI  NNK+ MH
Sbjct: 130 DLKDEEKHIFLDIACFFNGMDQNYVLRTINRSTQCTSLQISLLEDKSLLTIGENNKLEMH 189

Query: 442 DLLQEMGGEIVRQES 456
            LLQ M  +I+++ES
Sbjct: 190 GLLQAMARDIIKRES 204



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 3/119 (2%)

Query: 485 GINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLT 541
           G  L +LK L L    +L   P+ S   N+E L LK+  ++  +  SIG+L +L+ ++LT
Sbjct: 801 GQMLKNLKILNLSHSLDLTETPDFSYMPNLEKLVLKDCPSLSTVSHSIGSLHKLLLINLT 860

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +C  L+ +   +  LKSL  L LSGC  ++KL E++  +ESL  L   +    K+P S+
Sbjct: 861 DCIRLRKLPRSIYKLKSLETLILSGCSMIDKLEEDLEQMESLTTLIADKTAITKVPFSI 919


>gi|359477827|ref|XP_002282884.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1408

 Score =  318 bits (816), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 250/696 (35%), Positives = 367/696 (52%), Gaps = 100/696 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE S+  I+
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRFFII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
           IFS+ YA SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 80  IFSKNYAYSRWCLNELVKIIERKSQKESVVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 139

Query: 125 -------MGIFDIPTSESVLIEG-NVND-----ISKKLSDLF-------PSDNKDQLVGV 164
                  +  + I   ++  + G +VND     + K++ D         P      +VG+
Sbjct: 140 NQEKKEMIQKWRIALRKAANLSGCHVNDQYETEVVKEIVDTIIRRLNHQPLSVGKNIVGI 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQNIRD 221
              +++++S +   +TE N V + GI GIG   KTTIA AIY+ IS  ++GS F+ NI++
Sbjct: 200 GVHLEKLKSLM---NTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKE 256

Query: 222 ES---------EKVGGL---ANIHLN-------FERRRLSRMKVLIVFYDLTDLKQIDLL 262
            S         E + G+    N  +N         +R LS  +VL++F D+ +LKQ++ L
Sbjct: 257 RSKGDILQLQQELLHGILRGKNFKINNVDEGISMIKRCLSSNRVLVIFDDVDELKQLEYL 316

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
               D F   S +IIT+RD  +L  + G+ +   +EV +L+  +++ LFS  AF QN P 
Sbjct: 317 AEEKDWFRAKSTIIITSRDKHVLAQY-GADIR--YEVSKLNKEEAIELFSLWAFKQNRPQ 373

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             +  LS  +I YANG+PLAL+VLG+ L G     WESA+ KLK MPHM+I  VL++S+D
Sbjct: 374 EVYKNLSYNIIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHNVLRISFD 433

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
           GLDD ++ IFLD ACFFKG+D+  V   L      AK  I+ L  + L+T+S N + MHD
Sbjct: 434 GLDDIDKGIFLDVACFFKGDDRDFVSRILGP---HAKHAITTLDDRCLITVSKNMLDMHD 490

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL--------------PTGINL 488
           L+Q+MG EI+RQE  +DPG+RSRL    + Y VL  N                 P+ +  
Sbjct: 491 LIQQMGWEIIRQECPEDPGRRSRLC-DSNAYHVLTGNKGTRAIEGLFLDRCKFNPSELTT 549

Query: 489 DSLKE---LYLGGCSNLKR-----------FPEISCNIEDLDLKETAIEELPSSIGNLSR 534
           +S KE   L L    N +R           F   S  +  L      +E LP +  +   
Sbjct: 550 ESFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLPMNF-HAKN 608

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLE--SLEYLNLAE 590
           LV+L L + S +K V         LR ++LS  + L ++P+   + NLE  +LE      
Sbjct: 609 LVELSLRD-SNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDFSSVPNLEILTLEGCTTVL 667

Query: 591 K---DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           K   + E +P  + +   L  L    C +L+  PE+
Sbjct: 668 KRCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEI 703



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP GI     L+ L   GCS L+RFPEI  ++ +L   DL  TAI +LPSSI +L+ L  
Sbjct: 676 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQT 735

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKI 596
           L L  C  L  + + +C+L SL+ L+L  C  +E  +P +I +L SL+ LNL +  F  I
Sbjct: 736 LLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSI 795

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P+++ QLS+L  L L +C  L+ +PELP
Sbjct: 796 PTTINQLSRLEVLNLSHCNNLEQIPELP 823



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 8/148 (5%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            TSLP+ I    SL  L   GCS L+ FPEI  ++E L    L  TAI+E+PSSI  L  L
Sbjct: 1130 TSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGL 1189

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE- 594
              L L NC  L ++   +CNL S + L +S C    KLP+ +G L+SLEYL +   D   
Sbjct: 1190 QYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMN 1249

Query: 595  -KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             ++P S+  L  L  L+LQ C  L+  P
Sbjct: 1250 FQLP-SLSGLCSLRTLKLQGCN-LREFP 1275



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 13/135 (9%)

Query: 506  PEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
            P   C  +  D+ E  I E P  + +L       L +C  L S+ S +   KSL  L+ S
Sbjct: 1095 PRRKCCFKGSDMNEVPIIENPLELDSLC------LRDCRNLTSLPSSIFGFKSLATLSCS 1148

Query: 566  GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            GC +LE  PE + ++ESL  L L     ++IPSS+++L  L  L L+NCK L +LPE  C
Sbjct: 1149 GCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESIC 1208

Query: 626  GSSIHARHCTSLKTL 640
                   + TS KTL
Sbjct: 1209 -------NLTSFKTL 1216



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 17/122 (13%)

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNL----------KSLRRLNLSGCLKLEKLPEEIG 578
           I + S + +L++    G  +V  R  NL          K L+ L+ +GC KLE+ PE  G
Sbjct: 646 IPDFSSVPNLEILTLEGCTTVLKRCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKG 705

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLK 638
           ++  L  L+L+      +PSS+  L+ L  L LQ C +L  +P        H  H +SLK
Sbjct: 706 DMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPN-------HICHLSSLK 758

Query: 639 TL 640
            L
Sbjct: 759 EL 760


>gi|357499211|ref|XP_003619894.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494909|gb|AES76112.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1064

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 250/719 (34%), Positives = 366/719 (50%), Gaps = 96/719 (13%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
           VFLSFRG D R+ F  +L  AL  + I TFIDD  L RG+EI+PSL  AIE S+I I IF
Sbjct: 9   VFLSFRGSDTRNKFTGNLYKALVDKGIRTFIDDNDLERGDEITPSLVKAIEESRIFIPIF 68

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------------------- 116
           S  YASS +CL+ELV I+        +V PVFY V+P+                      
Sbjct: 69  SANYASSSFCLDELVHIIHCYKTKSCLVFPVFYDVEPTHIRNQSGIYGEHLTKHEERFQN 128

Query: 117 -------------GYCPSLGWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                            +    G    P   E   IE  V DIS  ++ +F +  K   V
Sbjct: 129 NEKNMERLRQWKIALIQAANLSGYHYSPHGYEYKFIEKIVEDISNNINHVFLNVAKYP-V 187

Query: 163 GVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G++S I+E++  L  GS  E   VG++G GG+GK+T+A A+Y+ ++  FEG  F+ N+R+
Sbjct: 188 GLQSRIEEVKLLLDMGSEDEVRMVGLFGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVRE 247

Query: 222 ES--------------------EKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            S                     K+G ++   ++  + RLSR K+L++  D+  L+Q++ 
Sbjct: 248 NSSHNNLKHLQEDLLLRTVKLNHKLGDVSE-GISIIKERLSRKKILLILDDVDKLEQLEA 306

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G LD F  GSRVIITTRD  LL  H G    H   V+EL+  ++L L  R AF  +  
Sbjct: 307 LAGGLDWFGHGSRVIITTRDKHLLACH-GITSTHA--VEELNETEALELLRRMAFKNDKV 363

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
            + + E+ N V+ YA+G+PLA+  +G  L G   E+WE  +++ + +P  DIQ++L+VSY
Sbjct: 364 PSSYEEILNRVVTYASGLPLAIVTIGGNLFGRKVEDWERTLDEYENIPDKDIQRILQVSY 423

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAKIGISRLVGKSLVTI--SN 435
           D L +++Q++FLD AC FKG +   V   L A    C     +G+  L  KSL+     +
Sbjct: 424 DALKEKDQSVFLDIACCFKGCEWTKVKKILHAHYGHC-IEHHVGV--LAEKSLIGHWEYD 480

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELY 495
             +T+HDL+++MG EIVRQES   PG+RSRLW P+DI  VL +NT   TG    +++ +Y
Sbjct: 481 TYVTLHDLIEDMGKEIVRQESPNKPGERSRLWFPDDIVNVLRDNTG--TG----NIEMIY 534

Query: 496 LGGCSNLK--RFPEISC----NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV 549
           L   S  +   +  ++C    N++ L ++       P  + +  R           L  +
Sbjct: 535 LEFDSTARETEWDGMACKKMTNLKTLIIEYANFSRGPGYLPSSLRYWKWIFCPLKSLSCI 594

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           SS+  N   +  LN S    L  +P+  G  NLE   + N   +   +I SS+  L+KL 
Sbjct: 595 SSKEFNYMKVLTLNYSR--YLTHIPDVSGLPNLEKCSFQNC--ESLIRIHSSIGHLNKLE 650

Query: 608 DLRLQNCKRLQSLPELPCGS--SIHARHCTSLK--TLSNSSTLLTRSSKHWDIFNFSNC 662
            L    C +L+  P L   S       HC SLK  T+ NS   L +     +I N SNC
Sbjct: 651 ILNASGCSKLEHFPPLQLLSLKKFKISHCESLKKITIHNSIGHLNK----LEILNTSNC 705



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 20/180 (11%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SLK+  + GC +LK FPE+ C   NI+D+++ +T+IEEL  S  N S L  L ++ 
Sbjct: 714 LQLPSLKKFEISGCESLKNFPELLCKMTNIKDIEIYDTSIEELRYSFQNFSELQRLTISG 773

Query: 543 CSGLK---------SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
              L+         S+         LR  NLS     E LP  +    ++ +L+L+E  F
Sbjct: 774 GGKLRFPKYNDTMNSIVFSNVEHVDLRDNNLSD----ECLPILLKWFVNVTFLDLSENYF 829

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
             +P  + +  +L  L L+ C+ L+ +  +P     + A  C S   LS+SS  +  S K
Sbjct: 830 TILPECLGECHRLKHLYLKFCEALEEIRGIPPNLERLCADECYS---LSSSSIRMLMSQK 886



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS--------SIGNLSRLVDL 538
           +L+ L+ L   GCS L+ FP +      L LK+  I    S        SIG+L++L  L
Sbjct: 645 HLNKLEILNASGCSKLEHFPPLQL----LSLKKFKISHCESLKKITIHNSIGHLNKLEIL 700

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           + +NC  L+        L SL++  +SGC  L+  PE +  + +++ + + +   E++  
Sbjct: 701 NTSNCLKLEHFPP--LQLPSLKKFEISGCESLKNFPELLCKMTNIKDIEIYDTSIEELRY 758

Query: 599 SMKQLSKLSDLRLQNCKRLQ 618
           S +  S+L  L +    +L+
Sbjct: 759 SFQNFSELQRLTISGGGKLR 778


>gi|51969820|dbj|BAD43602.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
 gi|51970068|dbj|BAD43726.1| putative disease resistance protein (TMV N-like) [Arabidopsis
           thaliana]
          Length = 543

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 215/557 (38%), Positives = 303/557 (54%), Gaps = 84/557 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           M SSS S       + DVFLSFRG D R+NF  HL  AL    I++FIDD+L RG+ ++ 
Sbjct: 1   MESSSPS-----SAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLT- 54

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L   IE SKI+I++FS  YA+S WCL ELVKILE +N   Q+VVP+FY VD SD     
Sbjct: 55  ALFDRIEKSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQR 114

Query: 117 ---------------GYCPS---------------LGWMGIFDIPTSESVLIEGNVNDIS 146
                          G  P                LG++ + +I TSE+ L++    D  
Sbjct: 115 NSFAVPFKLPELTFPGVTPEEISSWKAALASASNILGYV-VKEISTSEAKLVDEIAVDTF 173

Query: 147 KKLSDLFPSDNKDQLVGVESIIKEIESQLLSGS--TEFNTVGIWGIGGIGKTTIASAIYS 204
           KKL+DL PS N + LVG+ES +K +E +LLS       + +GI G+ GIGKTT+A  +Y 
Sbjct: 174 KKLNDLAPSGN-EGLVGIESRLKNLE-KLLSWEDLDTVHIIGIVGMVGIGKTTLADCLYG 231

Query: 205 NISSHFEGSYFMQNIRDESEK---------------------VGGLANIHLNFERRRLSR 243
            +   F+GS F+ NIR+ S +                     +G   N H  FE RRL  
Sbjct: 232 RMRGQFDGSCFLTNIRENSGRSGLESLLQKLFSTVLNDRDLEIGAPGNAHERFE-RRLKS 290

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            ++LIV  D+ D KQI  L+G    +  GSR+IITTRD +L++  +G +    + + +L+
Sbjct: 291 KRLLIVLDDVNDEKQIRYLMGHCKWYQGGSRIIITTRDSKLIETIKGRK----YVLPKLN 346

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
             ++L LFS NAF  + P   F  L+N+V+ YA G PLAL+VLGS L    +  WE+ ++
Sbjct: 347 DREALKLFSLNAFSNSFPLKEFEGLTNMVLDYAKGHPLALKVLGSDLCERDDLYWEAKLD 406

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           +LK   H DI +VL+ SY+ L  E++N+FLD ACFF+  +   V + L++        + 
Sbjct: 407 RLKSRSHGDIYEVLETSYEELTTEQKNVFLDIACFFRSENVDYVTSLLNSHGVDVSGVVK 466

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEI---VRQESIKDPGKRS----------RLWHPE 470
            LV K L+T+S+N+I MHD+LQ M  EI   V    I+D    S          RLW  E
Sbjct: 467 DLVDKCLITLSDNRIEMHDMLQTMAKEISLKVETIGIRDCRWLSRHGNQCQWHIRLWDSE 526

Query: 471 DIYQVLNENTSLPTGIN 487
           DI  +L E   +   I+
Sbjct: 527 DICDLLTEGLVMSNDIS 543


>gi|163914237|dbj|BAF95888.1| N-like protein [Nicotiana tabacum]
          Length = 1165

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 241/691 (34%), Positives = 362/691 (52%), Gaps = 97/691 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F SHL   L    I+TF D+K L  G  I   LS AIE S+ +IV
Sbjct: 16  YDVFLSFRGEDTRKTFTSHLYEVLKDRGIKTFQDEKRLEYGATIPEELSKAIEESQFAIV 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------DAGY 118
           +FS+ YA+SRWCLNELVKI+E K ++ Q V+P+FY VDPS                +  Y
Sbjct: 76  VFSKNYATSRWCLNELVKIMECKTQFRQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 135

Query: 119 CPSLGWMGIFDIPTSESVLIEGN---------------VNDISKKLSDLFPSDNKDQLVG 163
                 +  + I  + +  ++G+               V  IS KL  +  S  ++ +VG
Sbjct: 136 KDDAEGIQRWRIALNAAANLKGSCDNRDKSDADCIRQIVGQISSKLCKISLSYLQN-IVG 194

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI------SSHFEGSYFMQ 217
           +++ +K+IES L  G  +   VGI G+GG+GKTTIA A++  +      S  F+G+ F++
Sbjct: 195 IDTHLKKIESLLEIGINDVRVVGICGMGGVGKTTIARAMFDTLLVRRDSSYQFDGACFLE 254

Query: 218 NIRDESEKVGGLANIHLNFERR-----------------RLSRMKVLIVFYDLTDLKQ-I 259
           +I++   ++  L N  L+   R                 RL   KVLIV  D+ D    +
Sbjct: 255 DIKENKGRINSLQNTLLSKLLREKAEYNNKEDGKHQMASRLRSKKVLIVLDDIDDKDHYL 314

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L G LD F  GSR+I+TTRD  L++     + G +  V  L+ ++++ LF++ AFG+ 
Sbjct: 315 EYLAGDLDWFGNGSRIIVTTRDKHLIE-----KFG-IHLVTALTGHEAIQLFNQYAFGKE 368

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                F +LS  V+KYA G+PLAL+VLGS L+      W+SA+ ++K  P+  I + LK+
Sbjct: 369 VSDEHFKKLSLEVVKYAKGLPLALRVLGSSLRNRGITVWKSAIEQMKNNPNSKIVENLKI 428

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKI 438
           SYDGL+  +Q +FLD ACFF+G ++  +M  L +C   A+ G+  L+ +SLV I+  +KI
Sbjct: 429 SYDGLEPIQQEMFLDIACFFRGKEKGAIMQVLKSCDCGAEYGLDVLIERSLVFITKYSKI 488

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKELYL 496
            MHDL+QEMG  IV  +  K+ G+ SRLW  +D  +++  N  T     I + +   L +
Sbjct: 489 EMHDLIQEMGRYIVNLQ--KNLGECSRLWLTKDFEEMMINNTGTMAMEAIWVSTYSTLRI 546

Query: 497 G--GCSNLKRF-----------------------PEISCNIEDLDLKETAIEELPSSIGN 531
                 N+KR                          +S N+    L     E LPS+   
Sbjct: 547 SNEAMKNMKRLRILYIDNWTWSSDGSYITHDGSIEYLSNNLRWFVLPGYPRESLPSTF-E 605

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
              LV L L+  S L+ +     +L SLRR++LS   +L + P+  G + +LEYL+L   
Sbjct: 606 PKMLVHLKLSGNS-LRYLWMETKHLPSLRRIDLSRSKRLMRTPDFTG-MPNLEYLDLTWC 663

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            + E++  S+    KL  L L NCK L   P
Sbjct: 664 SNLEEVHHSLGCCRKLIRLDLYNCKSLMRFP 694



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 4/128 (3%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNL-SRLVDLDLT 541
           +N++SL+ L L  C +L++FPEI   ++    + + ++ I ELPSS     + +  LDL+
Sbjct: 696 VNVESLEYLGLEYCDSLEKFPEIHRRMKPEIQIHMGDSGIRELPSSYFQYQTHITKLDLS 755

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               L ++ S +C LKSL RLN+ GC KLE LPEEIG+L++LE L+       + PSS+ 
Sbjct: 756 GIRNLVALPSSICRLKSLVRLNVWGCPKLESLPEEIGDLDNLEELDAKCTLISRPPSSIV 815

Query: 602 QLSKLSDL 609
           +L+KL  L
Sbjct: 816 RLNKLKIL 823



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 10/164 (6%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRL 535
            +LP+ I  L SL  L + GC  L+  PE      N+E+LD K T I   PSSI  L++L
Sbjct: 761 VALPSSICRLKSLVRLNVWGCPKLESLPEEIGDLDNLEELDAKCTLISRPPSSIVRLNKL 820

Query: 536 VDLDLTNCSGLKSVSSRLC----NLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAE 590
             L  ++  G   V          L SL  L+LS C  ++  LPE+IG+L SL+ L L  
Sbjct: 821 KILSFSSF-GYDGVHFEFPPVAEGLHSLEHLDLSYCNLIDGGLPEDIGSLSSLKELCLDG 879

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC 634
            +FE +P S+ QL  L  L L +CKRL  LPEL  G ++    C
Sbjct: 880 NNFEHLPRSIAQLGALQILDLSDCKRLTQLPELHPGLNVLHVDC 923



 Score = 42.7 bits (99), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 7/101 (6%)

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKI 596
           LDLT CS L+ V   L   + L RL+L  C  L + P    N+ESLEYL L   D  EK 
Sbjct: 658 LDLTWCSNLEEVHHSLGCCRKLIRLDLYNCKSLMRFP--CVNVESLEYLGLEYCDSLEKF 715

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSL 637
           P   +++     + + +      + ELP     +  H T L
Sbjct: 716 PEIHRRMKPEIQIHMGD----SGIRELPSSYFQYQTHITKL 752


>gi|357468599|ref|XP_003604584.1| Disease resistance-like protein [Medicago truncatula]
 gi|355505639|gb|AES86781.1| Disease resistance-like protein [Medicago truncatula]
          Length = 684

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 249/683 (36%), Positives = 363/683 (53%), Gaps = 81/683 (11%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEG 68
           N  P  K DVF+SFRG DVR  F+  L  A  R++I  F+D KL +G++IS SL  AIEG
Sbjct: 3   NNTPKSKFDVFVSFRGNDVRDGFLGKLYEAFIRKQINIFVDYKLKKGDDISHSLGEAIEG 62

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL---GWM 125
           S IS+VIFSE YASS WCL ELVKI+E + KYGQ+V+P+FY VDP++  Y        ++
Sbjct: 63  SSISLVIFSENYASSHWCLEELVKIIECREKYGQLVIPIFYEVDPTNVRYQKKSYENAFV 122

Query: 126 GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ---------------------LVGV 164
            +     S  V I  +   IS  L     S  ++                      L+G+
Sbjct: 123 KLEKRYNSSEVKIWRHTLKISANLVGFTSSSFRNDAELLEEITNFVLMSLGKYSKGLIGM 182

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR---- 220
           +  I  + S L   S +   +GIWG+GGIGKTTIA  ++  I S ++G  FM N+     
Sbjct: 183 DKPIAHLNSLLNKESGKVRVIGIWGMGGIGKTTIAKELFDQICSEYDGCCFMSNVSLGLQ 242

Query: 221 ----------------DESEKV---GGLAN-IHLNFERRRLSRMKVLIVFYDLTDLKQID 260
                           +E  K+    GL+N IH     RR+ RMKVLIV  D+ +   ++
Sbjct: 243 SRGITFLKEMLFSNLLNEDVKIDSSNGLSNNIH-----RRIDRMKVLIVLDDIKEEGLLE 297

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           +L G LD F   SR+I+T+RD Q+L  +       V+EV  L+ +D+L LF+ NAF ++H
Sbjct: 298 MLFGTLDWFRSDSRIIVTSRDKQVLIANEVDD-DDVYEVGVLNSSDALALFNLNAFKESH 356

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGM-SEEEWESAVNKLKRMPHMDIQKVLKV 379
               + +LS  V+ YA G+PL L+VLG   +G  +++ W   + KL+++P  +I KV+++
Sbjct: 357 LEIKYYDLSKKVVDYAKGIPLVLKVLGHMFRGKHNKKTWVYQLEKLEKVPIQEIDKVMRL 416

Query: 380 SYDGLDDEEQNIFLDTACFFKGND---QYLVMNFLD-ACRFSAKIGISRLVGKSLVTIS- 434
           SYD LD  EQ  FLD ACFF G +    Y+ +   D     S  +G+ RL  K+L+TIS 
Sbjct: 417 SYDDLDLLEQKYFLDIACFFNGLNLKVDYMKLLLKDYESDNSVAVGLERLKDKALITISE 476

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDS 490
           +N I+MHD  Q+MG E+VR ESIKDP K+SRLW P+DI  VL  +          +NL S
Sbjct: 477 DNVISMHDFQQKMGREVVRLESIKDPSKQSRLWDPDDICYVLENDKGTDAIRSIRVNLSS 536

Query: 491 LKELYL-----GGCSNLKRFPEISCNIED-LDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           +  L L        +NLK          D LDL    ++  P+ +  L  +       C 
Sbjct: 537 VWMLKLSPHVFAKMTNLKFLNFFGGYDNDCLDLLPRGLQSFPNDLRYLRWV-------CY 589

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG-NLESLEYLNLAEKDFEKIPSSMKQL 603
            LKS      + ++L  LNL    K+EKL   +  +L +L+ + L+   F K   +  + 
Sbjct: 590 PLKSFPENF-SAENLVILNLRYS-KVEKLWCGVQPDLVNLKEVKLSHSGFLKELPNFSKA 647

Query: 604 SKLSDLRLQNCKRLQSL-PELPC 625
             L+ L +++C +L+S+ P + C
Sbjct: 648 ENLNVLHIEDCPQLESVHPSIFC 670


>gi|147799119|emb|CAN61627.1| hypothetical protein VITISV_024719 [Vitis vinifera]
          Length = 1520

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 214/548 (39%), Positives = 306/548 (55%), Gaps = 77/548 (14%)

Query: 14  PKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKIS 72
           P +DVFLSFRG D R NF  +L   L R  I+TF DB+ L +G  I+  LS AI+ S+I 
Sbjct: 17  PNYDVFLSFRGVDTRKNFTDYLYTTLVRYGIQTFRDBEELEKGGIIASDLSRAIKESRIF 76

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF---- 128
           ++IFS+ YA SRWCLNELVKI E   + G +V+P+FY VDPSD          GIF    
Sbjct: 77  MIIFSKNYAYSRWCLNELVKITECARQEGSMVLPIFYHVDPSDIR-----KQSGIFGDAL 131

Query: 129 -----DIPTSESVLIEGNVNDISKKLS-------DLFPSDNKDQLVGV------------ 164
                D    +  +I+     +++  S       D F ++  ++++              
Sbjct: 132 AHHERDADEKKKEMIQKWRTALTEAASLSGWHVDDQFETEVVNEIINTIVGSLKRQPLNV 191

Query: 165 -ESIIK---EIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQ 217
            E+I+     +E   L  +TE N V + GI G G   KTTIA AIY+ IS  ++ S F++
Sbjct: 192 SENIVGISVHLEKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLR 251

Query: 218 NIRDES-----------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQ 258
           NIR++S                 EK   ++NI   +   +R L+  +VL++  D+ DLKQ
Sbjct: 252 NIREKSQGDTLQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQ 311

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L  + D F   S +IIT+RD Q+L  +    V   +EV++    +++ LFS  AF +
Sbjct: 312 LKHLAZKKDWFNAKSTIIITSRDKQVLXRYG---VDTPYEVQKFDKKEAIELFSLWAFQE 368

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           N P   +  LS  +I+YA+G+PLAL++LG+ L G    EWESA+ KLKR+PHM+I KVL+
Sbjct: 369 NLPKEAYENLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLR 428

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           +S+DGLDD ++ IFLD ACFFKG  +  V   L      A+ GI+ L  K L+TIS N +
Sbjct: 429 ISFDGLDDMDKEIFLDVACFFKGKSKDFVSRILGP---HAEYGIATLNDKCLITISKNMM 485

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGG 498
            MHDL+Q+MG EI+RQE   D G+RSR+W   D Y VL  N      +   S+K L+L  
Sbjct: 486 DMHDLIQQMGKEIIRQECXDDLGRRSRIWD-SDAYDVLTRN------MGTRSIKGLFLDI 538

Query: 499 CSNLKRFP 506
           C    +FP
Sbjct: 539 C----KFP 542



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 103/219 (47%), Gaps = 55/219 (25%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I    SL  L   GCS L+ FPEI  ++E    LDL  +AI+E+PSSI  L  L 
Sbjct: 1085 SLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQ 1144

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD---- 592
            DL+L  C  L ++   +CNL SL+ L +  C +L+KLPE +G L+SLE L + + D    
Sbjct: 1145 DLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYVKDFDSMNC 1204

Query: 593  -------------------------------------------FEKIPSSMKQLSKLSDL 609
                                                       F  IP  + QL KL  L
Sbjct: 1205 QXPSLSGLCSLRILRLINCGLREIPSGICHLTSLQCLVLMGNQFSSIPDGISQLHKLIVL 1264

Query: 610  RLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
             L +CK LQ +PE P    ++ A  CTSLK    SS+LL
Sbjct: 1265 NLSHCKLLQHIPEPPSNLXTLVAHQCTSLKI---SSSLL 1300



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/138 (44%), Positives = 78/138 (56%), Gaps = 7/138 (5%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSS--IGNLSRL 535
           LP GI     L+ L  G CS LKRFPEI  N   + +LDL  TAIEELPSS   G+L  L
Sbjct: 680 LPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFGHLKAL 739

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFE 594
             L    CS L  + + +C L SL  L+LS C  +E  +P +I  L SL  LNL   DF 
Sbjct: 740 KILSFRGCSKLNKIPTDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLXELNLKSNDFR 799

Query: 595 KIPSSMKQLSKLSDLRLQ 612
            IP+++ +LS+L  L L 
Sbjct: 800 SIPATINRLSRLQTLDLH 817



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 13/130 (10%)

Query: 512  IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
             ED D+KE  I E P  +  L       L  C  LKS+ S +C  KSL  L   GC +LE
Sbjct: 1055 FEDSDMKELPIIENPLELDGLC------LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLE 1108

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
              PE + ++E L+ L+L     ++IPSS+++L  L DL L  CK L +LPE  C      
Sbjct: 1109 SFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESIC------ 1162

Query: 632  RHCTSLKTLS 641
             + TSLKTL+
Sbjct: 1163 -NLTSLKTLT 1171



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLKETA-IEELP--SSIGNLSR 534
           SLPT  +   L EL L G SN+K   R  ++   +  ++L  +  + E+P  SS+ NL  
Sbjct: 610 SLPTNFHAKDLVELILRG-SNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEI 668

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           L    L  C  L+ +   +   K L+ L+   C KL++ PE  GN+  L  L+L+    E
Sbjct: 669 LT---LKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIE 725

Query: 595 KIP--SSMKQLSKLSDLRLQNCKRLQSLP-ELPCGSSI 629
           ++P  SS   L  L  L  + C +L  +P ++ C SS+
Sbjct: 726 ELPSSSSFGHLKALKILSFRGCSKLNKIPTDVCCLSSL 763


>gi|356559373|ref|XP_003547974.1| PREDICTED: TMV resistance protein N isoform 2 [Glycine max]
          Length = 1097

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 251/718 (34%), Positives = 370/718 (51%), Gaps = 116/718 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D RH F  +L   L    I+TFIDD+ L +G+EI+ +L  AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEITKALEEAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGY--------------- 118
           + SE YASS +CLNEL  IL  +K K  + ++PVFY VDPSD  Y               
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRYHRGSFGEALANHEKK 127

Query: 119 --CPSLGWMGIFDIPTSESVLIEGN---------VNDISKKLSDLFPSD-NK------DQ 160
                +  + I+ +   +     G+           D  K++ +  PS  N+      D 
Sbjct: 128 LKSNYMEKLQIWKMALQQVSNFSGHHFQPDGDKYEYDFIKEIVESVPSKFNRNLLYVSDV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG++S +  ++S L  G+ +  + VGI G+GG+GKTT+A A+Y++I+ HFE   F++N+
Sbjct: 188 LVGLKSPVLAVKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYNSIACHFEACCFLENV 247

Query: 220 RDESEKVG--GLANIHL------------------NFERRRLSRMKVLIVFYDLTDLKQI 259
           R+ S K G   L NI L                  +  +R+L   KVL+V  D+ + +Q+
Sbjct: 248 RETSNKKGLESLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEKKVLLVLDDVNEHEQL 307

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-Q 318
             +I   D F  GSRVIITTRD QLL  H   R    ++V+EL+   +L L ++ AFG +
Sbjct: 308 QAIIDSPDWFGRGSRVIITTRDEQLLVLHNVKRT---YKVRELNEKHALQLLTQKAFGLE 364

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
                 + ++ N  + YA+G+PLAL+V+GS L G S EEWES ++  +R P   I   LK
Sbjct: 365 KKVDPSYHDILNRAVTYASGLPLALKVIGSNLFGKSIEEWESVLDGYERSPDKSIYMTLK 424

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNN- 436
           VSYD L+++E++IFLD AC FK  +   V + L A    S K  I  LV KSL+ I  + 
Sbjct: 425 VSYDALNEDEKSIFLDIACCFKDYELAKVQDILYAHYGRSMKYDIGVLVEKSLINIHRSW 484

Query: 437 ----KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN------------- 479
                + +HDL++++G EIVR+ES K+PGKRSRLW  EDI +VL E              
Sbjct: 485 YDKEVMRLHDLIEDVGKEIVRRESPKEPGKRSRLWSHEDIKEVLQEKKGTGKIEIICMNF 544

Query: 480 TSLPTGINLD--------SLKELYL-GGC---------SNLKRFPEISCNIEDL----DL 517
           +S    +  D        +LK L +   C         ++L+      C  +DL    + 
Sbjct: 545 SSFGKEVEWDGDALKKMENLKTLIIKSACFSKGPKHLPNSLRVLEWWRCPSQDLPHNFNP 604

Query: 518 KETAIEELP----SSIG-------NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
           K+ AI +LP    +S+G       ++  L  L L  C  L  +    C L  L +L+   
Sbjct: 605 KQLAICKLPHSNFTSLGLAPLFDKSVVNLTSLILDECDSLTEIPDVSC-LSKLEKLSFKD 663

Query: 567 CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           C  L  +   +G LE L+ L+     + +  P    +L+ L  L L  C  L+S PE+
Sbjct: 664 CRNLFTIHPSVGLLEKLKILDAKGCPELKSFPPL--KLTSLESLDLSYCSSLESFPEI 719



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 5/127 (3%)

Query: 490 SLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
           +L  L L  C +L   P++SC   +E L  K+   +  +  S+G L +L  LD   C  L
Sbjct: 632 NLTSLILDECDSLTEIPDVSCLSKLEKLSFKDCRNLFTIHPSVGLLEKLKILDAKGCPEL 691

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
           KS       L SL  L+LS C  LE  PE +G +E++  L+L+E    K+P S + L++L
Sbjct: 692 KSFPP--LKLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPSFRNLTRL 749

Query: 607 SDLRLQN 613
            +L L +
Sbjct: 750 QELELDH 756



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 39/185 (21%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSR 534
           E  S P  + L SL+ L L  CS+L+ FPEI     NI +LDL E  I +LP S  NL+R
Sbjct: 690 ELKSFPP-LKLTSLESLDLSYCSSLESFPEILGKMENITELDLSECPITKLPPSFRNLTR 748

Query: 535 LVDLDLTNCS---------GLKSVSSRLCNLKSL-----RRLNL----SGCLKL------ 570
           L +L+L +              ++ S +C +  L     RRL         LKL      
Sbjct: 749 LQELELDHGPESADQLMDFDAATLISNICMMPELYDISARRLQWRLLPDDALKLTSVVCS 808

Query: 571 -----------EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
                      E LP  +    ++E L L       IP  +K+   LS L L  C RLQ 
Sbjct: 809 SVHSLTLELSDELLPLFLSWFVNVENLRLEGSKCTVIPECIKECRFLSILILSGCDRLQE 868

Query: 620 LPELP 624
           +  +P
Sbjct: 869 IRGIP 873


>gi|356561225|ref|XP_003548883.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1052

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 255/719 (35%), Positives = 367/719 (51%), Gaps = 104/719 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+ F  +L   L    I TFIDD+ L +G++I+ +L  AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRYGFTGNLYNVLRERGIHTFIDDQELQKGDQITKALEEAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSD------------AGYCPS 121
           + SE YASS +CLNEL  IL  +K K   +V+PVFY VDPSD            A +   
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKNDVLVLPVFYKVDPSDVRKHRGSFGEALANHEKK 127

Query: 122 LGWMGIFDIPTSESVL-----IEGN-------------VNDISKKLSDLFPSD---NKDQ 160
           L    +  + T +  L     I G+             + +I + +S  F  D     D 
Sbjct: 128 LNSNNMEKLETWKMALHQVSNISGHHFQHDGDKYEYKFIKEIVELVSSKFNRDLLYVSDV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG+ES +  ++S L  GS +  + VGI G+GG+GKTT+A A+Y++I+ HFE SYF++N+
Sbjct: 188 LVGLESPVLAVKSLLDVGSDDVVHMVGIHGLGGVGKTTLAVAVYNSIARHFEASYFLENV 247

Query: 220 RDESEKVG--GLANIHL------------------NFERRRLSRMKVLIVFYDLTDLKQI 259
           R+ S K G   L +I L                  +  + +L + KVL++  D+ +  Q+
Sbjct: 248 RETSNKKGLQHLQSILLSKIVRDKKIKLTNWREGTHIIKHKLKQKKVLLILDDVNEHIQL 307

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-Q 318
             +IG  D F  GSRVIITTRD  LL  H    V   + ++EL+   +L L  + AF  +
Sbjct: 308 QAIIGSPDWFGRGSRVIITTRDEHLLALHN---VKKTYMLRELNKKYALQLLIQKAFELE 364

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
                 + ++ N  + YA+G+PLAL+V+GS L G S EEWESA+N  +R+P   I  +LK
Sbjct: 365 KEVDPSYHDILNRAVTYASGLPLALEVIGSNLFGKSIEEWESALNGYERIPDKSIYMILK 424

Query: 379 VSYDGLDDEEQNIFLDTACFFK----GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI- 433
           VSYD L+++E+NIFLD AC FK    G  Q ++      C    K  I  LV KSL+ I 
Sbjct: 425 VSYDALNEDEKNIFLDIACCFKEYKLGELQDILYAHYGRC---MKYHIGVLVKKSLINIH 481

Query: 434 ----SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TG 485
                +  + +HDL+++MG EIVR+ES  +PGKRSRLW  EDI  VL EN          
Sbjct: 482 ECSWDSKVMRLHDLIEDMGKEIVRRESPTEPGKRSRLWSHEDINLVLQENKGTSKIEIIC 541

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG--------------- 530
           +N  S  E      +  K+   +   I   D        LP+++                
Sbjct: 542 MNFSSFGEEVEWDGNAFKKMKNLKTLIIQSDCFSKGPRHLPNTLRVLEWWRCPSQEWPRN 601

Query: 531 -NLSRLVDLDLTNCS----GLKSV-SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            N  +L    L + S    GL  + + RL NL    RL L  C  L ++P ++  L +LE
Sbjct: 602 FNPKQLAICKLPHSSFTSLGLAPLFNKRLVNLT---RLTLDECDSLTEIP-DVSGLSNLE 657

Query: 585 YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
            L+ A   +   I  S+  L KL  L  + C  L+S P L   S       +C+SL++ 
Sbjct: 658 NLSFASCWNLFTIHHSVGLLEKLKTLNAEGCPELKSFPPLKLTSLEMFQLSYCSSLESF 716



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 5/129 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L +L  L L  C +L   P++S   N+E+L       +  +  S+G L +L  L+   C 
Sbjct: 630 LVNLTRLTLDECDSLTEIPDVSGLSNLENLSFASCWNLFTIHHSVGLLEKLKTLNAEGCP 689

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS       L SL    LS C  LE  PE +G +E++  L+  +    K+P S + L+
Sbjct: 690 ELKSFPP--LKLTSLEMFQLSYCSSLESFPEILGKMENITQLSWTDCAITKLPPSFRNLT 747

Query: 605 KLSDLRLQN 613
           +L  L ++N
Sbjct: 748 RLQLLVVEN 756



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 34/180 (18%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSR 534
           E  S P  + L SL+   L  CS+L+ FPEI     NI  L   + AI +LP S  NL+R
Sbjct: 690 ELKSFPP-LKLTSLEMFQLSYCSSLESFPEILGKMENITQLSWTDCAITKLPPSFRNLTR 748

Query: 535 LVDLDLTNCSGL----KSVSSRLCNLKSLRRLNLSG-----------------CLKLEKL 573
           L  L + N +       ++ S +C +  L +++  G                 C  ++ L
Sbjct: 749 LQLLVVENLTEFDFDAATLISNICMMPELNQIDAVGLQWRLLLDDVLKLTSVVCSSVQSL 808

Query: 574 PEEIGN---------LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             E+ +           +++ LNL+   F  IP  +K+   L+ L L  C  L+ +  +P
Sbjct: 809 TLELSDELLQLFLSCFVNVKKLNLSWSKFTVIPECIKECRFLTTLTLNYCNCLREIRGIP 868


>gi|357499511|ref|XP_003620044.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495059|gb|AES76262.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1301

 Score =  318 bits (814), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 247/723 (34%), Positives = 380/723 (52%), Gaps = 96/723 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D R+ F  +L  AL  + I TFID+  L RG+EI+P+L  AI+ S+I I 
Sbjct: 20  YQVFLSFRGTDTRYGFTGNLYKALTDKGIHTFIDENDLRRGDEITPALLKAIDESRIFIP 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------ 123
           +FS  YASS +CL+ELV I+      G++V+PVF+ V+PS        Y  +L       
Sbjct: 80  VFSIKYASSSFCLDELVHIIHCYTTKGRVVLPVFFGVEPSHVRHHKGSYGQALAEHKKRF 139

Query: 124 ------------WM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                       W           G  D P   E  LI   V +IS K+S   P    + 
Sbjct: 140 QNDEDNIKRLQRWKVALSQAANFSGYHDSPPGYEYELIGKIVKEISNKISRQ-PLHVANY 198

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            +G++S +++++S L   S +  + VG++G GG+GK+T+A AIY+ I+  FE S F++N+
Sbjct: 199 PIGLQSRVQQVKSLLDERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENV 258

Query: 220 RDESE--------------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           R+ S                     K+GG++   ++  + RL  MK+L++  D+ D+ Q+
Sbjct: 259 RENSASNKLKHLQEELLLKTLQLEIKLGGVSE-GISHIKERLHSMKILLILDDVDDMGQL 317

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             L G  D F  GSRVIITTRD  LL +H   R    + ++ L   ++L L    AF  N
Sbjct: 318 QALAGEPDWFGLGSRVIITTRDRHLLTSHDIERK---YALEGLCRTEALELLRWMAFKNN 374

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
              + + ++ N  + YA+G+PL L+V+GS L G   EEW+  +   +++P+  I ++LKV
Sbjct: 375 KVPSVYEDVLNRAVSYASGLPLVLEVVGSNLFGKRIEEWKGTLEGYEKIPNKKIHEILKV 434

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAKIGISRLVGKSLVTI-- 433
           SYD L++E+Q++FLD AC FKG    +V + L A    C  +  +G+  L  KSLV I  
Sbjct: 435 SYDALEEEQQSVFLDIACCFKGCGLEVVEDILRAHYGHC-ITHHLGV--LAEKSLVQICT 491

Query: 434 ----SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----G 485
               S  K+T+H+L+++MG E+VRQES K+PG+RSRLW  +DI  VL ENT         
Sbjct: 492 YHSGSIYKVTLHNLIEDMGKEVVRQESPKEPGERSRLWCQDDIVHVLTENTGTRNIEMIH 551

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +N  S++ +       +K+   +   I +        + LPSS+    R    +   C  
Sbjct: 552 LNCPSMENVIEWNGKAMKKMTNLKTLIIENGQFSRGPDYLPSSL----RFCKWN--GCPS 605

Query: 546 LKSVSSRLCNLK--SLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIPSSMK 601
            KS+SS + N K   ++ L L+ C  L ++P+  G  NLE L +    E +   I +S+ 
Sbjct: 606 -KSLSSCILNKKFNYMKVLKLNSCQYLTQIPDVSGLPNLEKLSF-QFCE-NLITIHNSVG 662

Query: 602 QLSKLSDLRLQNCKRLQSLP--ELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
            L++L  L  + C +LQS+P  +LPC   +    C SLK+      LL + +   DI+  
Sbjct: 663 FLNRLEILDAKYCIKLQSVPPLQLPCLKRLELAMCKSLKSFPE---LLCKMTNLKDIWLN 719

Query: 660 SNC 662
             C
Sbjct: 720 ETC 722



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 8/135 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLK--ETAIEELPSSIGNLSRLVDLDLTNC 543
            + +K L L  C  L + P++S   N+E L  +  E  I  + +S+G L+RL  LD   C
Sbjct: 617 FNYMKVLKLNSCQYLTQIPDVSGLPNLEKLSFQFCENLIT-IHNSVGFLNRLEILDAKYC 675

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L+SV      L  L+RL L+ C  L+  PE +  + +L+ + L E   E  P S++ L
Sbjct: 676 IKLQSVPP--LQLPCLKRLELAMCKSLKSFPELLCKMTNLKDIWLNETCME-FPFSIQNL 732

Query: 604 SKLSDLRLQNCKRLQ 618
           S+L  L++  C  L+
Sbjct: 733 SELDRLQIYQCGMLR 747


>gi|297838205|ref|XP_002886984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332825|gb|EFH63243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 987

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 241/717 (33%), Positives = 355/717 (49%), Gaps = 116/717 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR +F+SH++    R+ I  FID ++ RG  I   +  AI GSKI+IV+
Sbjct: 23  HQVFPSFRGEDVRRDFLSHIHKEFQRKGITPFIDSEIKRGESIGLEIVQAIRGSKIAIVL 82

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----------------AGYC 119
            S  YASS WCL+ELV+I++ K +  QIV+P+FY VDPSD                AG  
Sbjct: 83  LSRNYASSSWCLDELVEIMKCKEELSQIVIPIFYKVDPSDVKKLTGSFGSVFEDRCAGKT 142

Query: 120 PSL--GW-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
             L   W   +  + T          +E+ +IE   NDIS  L+   PS + D L+G+ +
Sbjct: 143 NELIRRWRQALAKVATITGYDSRCWDNEAAMIEKIANDISNMLNFSTPSRDFDGLIGMRA 202

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD----- 221
            +K +E  L   S E   +GIWG  GIGKTTIA  ++S  S  FE S FM+N++D     
Sbjct: 203 HMKIMEPLLCLHSDEVRMIGIWGPSGIGKTTIARVLFSQFSGTFELSVFMENVKDLMYTR 262

Query: 222 -------------ESEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                        + + +  + N       HL     RL   KV IV  ++    Q+D +
Sbjct: 263 PVCSDDYSAKIHLQKQFMSQIINHKDIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAI 322

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
                 F  GSR+IITT+D +LLK H G  +  +++V   S  ++  +F   AFGQN P 
Sbjct: 323 AKETRWFGCGSRIIITTQDRKLLKAHDG--INDIYKVDFPSAYEACQIFCMYAFGQNFPK 380

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
            GF EL+  V +   G+PL L+V+GS+ KGMS+ EW +A+ +L+     +IQ +LK SY+
Sbjct: 381 DGFEELAWEVARLLGGLPLGLRVMGSHFKGMSKHEWINALPRLRTRLDANIQSILKFSYN 440

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
            L +E++++FL  AC F       V   L       + GI  L  KSL++I   +I MH+
Sbjct: 441 ALCEEDKDLFLQIACLFNNKRIEKVEEHLAEKSLDVRQGIHVLAEKSLISIEEGRIKMHN 500

Query: 443 LLQEMGGEIVR----QESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS------ 490
           LL+++  EIVR     +SI++PGKR  L H  DI ++L  +T   +  GI+  S      
Sbjct: 501 LLEKLAKEIVRHKPGHQSIREPGKRQFLVHATDICEILTNDTGSKSVIGIHFYSSELSSE 560

Query: 491 --LKELYLGGCSNLK----------------------------------RFPEISC---- 510
             + E    G SNLK                                  RFP ++C    
Sbjct: 561 LNISERAFEGMSNLKFLRFYYRYGDRSDKLYLPQGLNYLSRKLKILEWDRFP-LTCMPSN 619

Query: 511 ----NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
                + +L+++ + + +L      L+ L  + L +   LK +   L    +L+ L L  
Sbjct: 620 FCTEYLVELNMRFSKLHKLWDGNMPLANLKWMYLNHSKILKELPD-LSTATNLQELFLVK 678

Query: 567 CLKLEKLPEEIGNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           C  L +LP  IG   +L+  YLN+     E +PSS+  L KL  L L  C +L+ LP
Sbjct: 679 CSSLVELPSSIGKATNLQKLYLNMCTSLVE-LPSSIGNLHKLQKLTLNGCTKLEVLP 734



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 85/163 (52%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  INL+SL+EL L  C  LKRFPEIS NI+ L L  TAI+E+PSS  +  RL DL+L+
Sbjct: 733 LPANINLESLEELDLTDCLVLKRFPEISTNIKVLKLIGTAIKEVPSSTKSWLRLCDLELS 792

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK                           +   ++ +  Y+N  +K+ ++IP  +K
Sbjct: 793 YNQNLKE-------------------------SQHAFDIITTMYIN--DKEMQEIPLWVK 825

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           ++S+L    L  CK+L SLP+L    S +   +C SL+ L  S
Sbjct: 826 KISRLQTFILSGCKKLVSLPQLSDSLSYLKVVNCESLERLDCS 868



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 28/158 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDL-KETAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK +YL     LK  P++S   N+++L L K +++ ELPSSIG  + L  L L  C+
Sbjct: 645 LANLKWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCT 704

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDF------- 593
            L  + S + NL  L++L L+GC KLE LP  I NLESLE L+L +    K F       
Sbjct: 705 SLVELPSSIGNLHKLQKLTLNGCTKLEVLPANI-NLESLEELDLTDCLVLKRFPEISTNI 763

Query: 594 ----------EKIPSSMKQLSKLSDLRL---QNCKRLQ 618
                     +++PSS K   +L DL L   QN K  Q
Sbjct: 764 KVLKLIGTAIKEVPSSTKSWLRLCDLELSYNQNLKESQ 801


>gi|297791669|ref|XP_002863719.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309554|gb|EFH39978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 237/699 (33%), Positives = 353/699 (50%), Gaps = 112/699 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR +F+SH+     R  I  FID+++ RG  I P L  AI  SKI+I++
Sbjct: 63  HHVFPSFRGEDVRRDFLSHIQMEFQRMGITPFIDNEIERGQSIGPELIRAIRESKIAIIL 122

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------- 115
            S  YASS WCL+EL +I++ + + GQ V+ VFY VDPSD                    
Sbjct: 123 LSRNYASSSWCLDELAEIMKCREELGQTVLAVFYKVDPSDVKKLTGDFGKVFKKTCAGKT 182

Query: 116 -----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                            AGY  S  W        +E+ +I     DIS KL++   S + 
Sbjct: 183 KEHVGRWRQALANVATIAGY-HSTNW-------DNEATMIRNIATDISNKLNNSASSSDF 234

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           D LVG+ + +K++E  L  GS E   +GIWG  GIGKTTIA  +Y+ +SS F+ S FM++
Sbjct: 235 DGLVGMTAHLKKMEPLLCLGSDEVRMIGIWGPSGIGKTTIARVVYNKLSSSFQLSVFMES 294

Query: 219 IRD----------------ESEKVGGLANI------HLNFERRRLSRMKVLIVFYDLTDL 256
           I                  + + +  + N       HL   + RL   KVL+V   +   
Sbjct: 295 IESKYTRPCSDDYCAKLQLQQQFMSQITNQNDMKISHLGVVQDRLKDKKVLVVLDGVDKS 354

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q+D +      F PGSR+IITT++ ++ + H    + H+++V   S +++L +    AF
Sbjct: 355 MQLDAMAKETWWFGPGSRIIITTQNRKIFREHG---INHIYKVNFPSTDEALQILCTYAF 411

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           GQN P  GF EL+  V + A  +PL L+V+GSY +GMS+ EW  A+ +L+     DI  +
Sbjct: 412 GQNSPKHGFEELAREVTQLAGELPLCLRVIGSYFRGMSKLEWTKALPRLRSSLDADILSI 471

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           LK SYD LDDE++ +FL  ACFF        ++YL   FLD         ++ L  KSL+
Sbjct: 472 LKFSYDALDDEDKYLFLHIACFFNREWIVKVEEYLAETFLDVSH-----RLNGLAEKSLI 526

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN---ENTSLPTGINL 488
           +++   I MHDLL ++G +IVR++SI++PG+R  L    +I  VLN     +    GIN 
Sbjct: 527 SLNRGYINMHDLLVKLGRDIVRKQSIREPGQRLFLVDAREICDVLNLDANGSRSVMGINF 586

Query: 489 D----------SLKELYLGGCSNLK--RF---------PE----ISCNIEDLDLKETAIE 523
           +           + E    G SNL+  RF         P     IS  +  L      + 
Sbjct: 587 NFGEYRIKEKLHISERAFQGMSNLQFLRFEGNNNTIHLPHGLEYISRKLRLLHWTYFPMT 646

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
            LP  I N   LV+L +   S L+ +   +  L +L+R++LS  L L++LP ++    +L
Sbjct: 647 CLP-PIFNTEFLVELHM-RYSKLEKLWEGIKPLPNLKRMDLSSSLLLKELP-DLSTATNL 703

Query: 584 EYLNLA-EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           + LNL+      K+PS++     L  L L+ C  L +LP
Sbjct: 704 QELNLSGGSSLVKLPSAIGCTKNLRTLNLRYCSSLMNLP 742



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 82/187 (43%), Gaps = 52/187 (27%)

Query: 482  LPTGI-NLDSLKELYLGGCSNL-----------------------KRFPEISCNIEDLDL 517
            LP  I NL  L++L L GCS L                       KRFPEIS N+E L L
Sbjct: 909  LPFSIGNLQKLQKLTLRGCSKLEDLPANIKLGSLCLLDLTDCLLLKRFPEISTNVEFLYL 968

Query: 518  KETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
            K T IEE+PSSI + SRL  L ++    LK+                         P   
Sbjct: 969  KGTTIEEVPSSIKSWSRLTKLHMSYSENLKN------------------------FPHAF 1004

Query: 578  GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTS 636
              +  L+  N   ++F   P  + + S+L+ L L+ CK+L SL ++P   S I A  C S
Sbjct: 1005 DIITVLQVTNTEIQEF---PPWVNKFSRLTVLILKGCKKLVSLQQIPDSLSYIDAEDCES 1061

Query: 637  LKTLSNS 643
            L+ L  S
Sbjct: 1062 LERLDCS 1068



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
           SIGNL  L +LDL++ S L  +   + N  +L  LNL  C  L KLP  IGNL+ L+ L 
Sbjct: 864 SIGNLINLKELDLSSLSCLVELPFWIGNATNLEVLNLDQCSNLVKLPFSIGNLQKLQKLT 923

Query: 588 L-AEKDFEKIPSSMK 601
           L      E +P+++K
Sbjct: 924 LRGCSKLEDLPANIK 938


>gi|357499513|ref|XP_003620045.1| Resistance protein [Medicago truncatula]
 gi|355495060|gb|AES76263.1| Resistance protein [Medicago truncatula]
          Length = 894

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 237/695 (34%), Positives = 364/695 (52%), Gaps = 94/695 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D RH F  +L  AL  + I TFIDD  L RG+EI+PSL  AI+ S+I I 
Sbjct: 18  YQVFLSFRGTDTRHGFTGNLYKALTDKGIHTFIDDNDLPRGDEITPSLLKAIDESRIFIP 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS  YASS +CL+ELV I+      G++V+PVF+ V+P+        Y  +L       
Sbjct: 78  VFSINYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVEPTKVRHQKGSYGEALAEHEKRF 137

Query: 123 -----------GWM----------GIFDIPTSESVLIEGN-VNDISKKLSDLFPSDNKDQ 160
                      GW           G  D P        G  V  IS K+S   P    + 
Sbjct: 138 QNDKNNMERLQGWKVALSQAANFSGYHDSPPGYEYEFTGEIVKYISNKISRQ-PLHVANY 196

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            VG++S ++E++S L   S +  + VG++G GG+GK+T+A AIY+ I+  FE S F++N+
Sbjct: 197 PVGLQSQVQEVKSLLDERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENV 256

Query: 220 RDESE--------------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           R+ S                     K GG++   + + + RL R KVL++  D+ ++KQ+
Sbjct: 257 RENSTSNKLKHLQEELLLKTLQLEIKFGGVSE-GIPYIKERLHRKKVLLILDDVDNMKQL 315

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             L G  D F  GS+VII TRD  LL  H G +  H  +V+ L   ++L L    AF  +
Sbjct: 316 HALAGGPDWFGRGSKVIIATRDKHLLTCH-GIKSMH--KVEGLYGTEALELLRWMAFKSD 372

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           +  +G+ E+ N  + YA+G+PL ++++GS L G + EEW+  ++   R+P+ +IQK+LKV
Sbjct: 373 NVPSGYEEILNRAVAYASGLPLVIEIVGSNLFGKNIEEWKYTLDGYDRIPNKEIQKILKV 432

Query: 380 SYDGLDDEEQNIFLDTACFFKG---NDQYLVMNFLDACRFSAKIGISRLVGKSLVTI--- 433
           SYD L++EEQ++FLD AC FKG    D    ++       +  +G+  L  KSL+     
Sbjct: 433 SYDSLEEEEQSVFLDIACCFKGYNWEDAKYTLHSHYGHSITHHLGV--LAEKSLIDQYWE 490

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGINLD 489
             + + +HDL+++MG E+VRQESIK+PG+RSRL   +DI +VL ENT         +NL 
Sbjct: 491 YRDYVMLHDLIEDMGKEVVRQESIKEPGERSRLCCQDDIVRVLRENTGTSKIEMIYMNLH 550

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI------GNLSRLVDLDLTN- 542
           S++ +        K+  ++   I +       ++ LPSS+      G LS+ +  ++ N 
Sbjct: 551 SMESVIDKKGKAFKKMTKLKTLIIENGHFSGGLKYLPSSLRVLKWKGCLSKCLSSNILNK 610

Query: 543 -CSGLKSVSSRLC----------NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN-LAE 590
               +K ++   C           L +L +L+ + C  L  +   IG+L  LE+L+    
Sbjct: 611 KFQNMKVLTLNYCEYLTHIPDVSGLSNLEKLSFTCCDNLITIHNSIGHLNKLEWLSAYGC 670

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           +  E+ P     L+ L  L L  C+ L S PEL C
Sbjct: 671 RKLERFPPL--GLASLKKLNLSGCESLDSFPELLC 703



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 7/146 (4%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SLK+L L GC +L  FPE+ C +  +D   L  T+I ELP S  NLS L +L + N
Sbjct: 679 LGLASLKKLNLSGCESLDSFPELLCKMTKIDNILLISTSIRELPFSFQNLSELQELSVAN 738

Query: 543 CS-GLKSVSSRLCNL--KSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            +      + ++ ++   ++  L L  C L  E LP  +    ++  L+L+  +F+ +P 
Sbjct: 739 GTLRFPKQNDKMYSIVFSNMTELTLMDCNLSDECLPILLKWFVNVTCLDLSYSNFKILPE 798

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELP 624
            + +   L  + +++C+ L+ +  +P
Sbjct: 799 CLSECHHLVLITVRDCESLEEIRGIP 824



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 9/131 (6%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEELPS---SIGNLSRLVDLDLTN 542
             ++K L L  C  L   P++S   N+E L    T  + L +   SIG+L++L  L    
Sbjct: 612 FQNMKVLTLNYCEYLTHIPDVSGLSNLEKLSF--TCCDNLITIHNSIGHLNKLEWLSAYG 669

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C  L+        L SL++LNLSGC  L+  PE +  +  ++ + L      ++P S + 
Sbjct: 670 CRKLERFPP--LGLASLKKLNLSGCESLDSFPELLCKMTKIDNILLISTSIRELPFSFQN 727

Query: 603 LSKLSDLRLQN 613
           LS+L +L + N
Sbjct: 728 LSELQELSVAN 738


>gi|227438157|gb|ACP30568.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1030

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 236/686 (34%), Positives = 354/686 (51%), Gaps = 78/686 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           M SSS S N     + +VF SF G+D+R NF+SH    L R+ I TFID ++ R   I P
Sbjct: 1   MESSSPSRNW----RFNVFPSFCGEDLRKNFLSHFLKELQRKGITTFIDHEIKRSKAIGP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L +AI GS++++++ S+ YASS WCLNEL++I+  K + GQ V+PVFY VDPSD     
Sbjct: 57  ELVAAIRGSRMAVILLSKNYASSTWCLNELLEIMSCKEEIGQTVMPVFYEVDPSDVR--K 114

Query: 121 SLGWMG-IFD------------------------------IPTSESVLIEGNVNDISKKL 149
             G  G IF+                              +  +E+ +IE    DIS  L
Sbjct: 115 QAGDFGNIFEETCLGKSEEVRQRWSRALTDLANLAGVDSRLWNNEADMIEKLALDISSAL 174

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
            ++ PS + D LVG+E+ IK ++  L   S+E   VG+WG  GIGKTTIA A+Y+ +S  
Sbjct: 175 -NVTPSRDFDDLVGIEAHIKNLKPLLSLESSEVRIVGVWGPAGIGKTTIARALYTRLSPI 233

Query: 210 FEGSYFMQNIRDESEKVG---GLANIHLNFE-------------------RRRLSRMKVL 247
           F+ S FM NI++   ++      + +HL  E                   R RL   +V 
Sbjct: 234 FQHSAFMGNIKETYRRISLDDYGSKLHLQEEFLSKLINHKDVKIPHSGVVRERLKDKRVF 293

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+ +L+Q+  L      F  GSR+++TT+D QLLK H    +  V++V+  S  ++
Sbjct: 294 VVLDDVDELEQLIALAKEPRWFGSGSRIVVTTQDRQLLKAHG---IDLVYKVELPSRLEA 350

Query: 308 LTLFSRNAFGQNHP-AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           L +F ++AFGQ HP   G  EL+  V   A  +PL L VLGSYL+G S+EEWE A+ +L 
Sbjct: 351 LEIFCQSAFGQKHPPCVGIRELALQVTHLAGYLPLGLTVLGSYLRGFSKEEWEYAIPRLN 410

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
                 I K L+ SYD L  ++++IFL  AC F G +   V   L+        G+  L 
Sbjct: 411 TSLDGKIXKTLRFSYDALHSKDKSIFLHIACLFNGKNVXDVKMLLENSNLDVDHGLKALA 470

Query: 427 GKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPT 484
            KSL+     +I MH LLQ+MG EIV Q+S+ +PGKR  L   E+I  VL     T+   
Sbjct: 471 DKSLIDTHWGRIHMHSLLQKMGREIVCQQSVHEPGKRQFLVDAEEIRDVLACKSGTATVL 530

Query: 485 GINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET----AIEELPSSIGNLSRLVDLDL 540
           GI+ D+ K    G  S  K+  +   N++ L++ +     +   LP  +  L   + L  
Sbjct: 531 GISFDASK--INGELSISKKAFKGMHNLQFLEIYKKWNGRSRLNLPQGLNYLPHKLRLLH 588

Query: 541 TNCSGLKSVSSRL-CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA-EKDFEKIPS 598
            +   ++S+ S+         R+  S   KLEKL E I  L SL+ ++++  +  ++IP 
Sbjct: 589 WDSFPMRSLPSKFSAEFLVELRMRFS---KLEKLWEGIIPLRSLKVMDVSYSRKLKEIP- 644

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELP 624
           ++   + L       C+ L + P +P
Sbjct: 645 NLSNATNLKKFSADGCESLSAFPHVP 670



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 37/211 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P   N  +LK+    GC +L  FP +   IE+L+L  T I E+P  I NL  L  + +T
Sbjct: 643 IPNLSNATNLKKFSADGCESLSAFPHVPNCIEELELSYTGIIEVPPWIKNLCGLQRVCMT 702

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLK--------------LEKLPEEIGNLESLEYLN 587
            CS L ++S  +  L++L  ++ SG +                ++L  +  N+E +    
Sbjct: 703 QCSKLTNISMNVSKLENLEEVDFSGSVDGILFTAIVSWLSGVKKRLTIKANNIEEMLPKC 762

Query: 588 LAEK--------------DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
           L  K              D + IP  +K  S+L  L +  C++L SLP+LP   S ++A+
Sbjct: 763 LPRKAYTSPVLLDLSGNEDIKTIPDCIKHFSQLHKLDVGKCRKLTSLPQLPESLSELNAQ 822

Query: 633 HCTSLKTLSNSSTLLTRSSKHWDI-FNFSNC 662
            C SL+ +         S  + DI  NF+NC
Sbjct: 823 ECESLERIHG-------SFHNPDICLNFANC 846


>gi|357499329|ref|XP_003619953.1| Resistance protein [Medicago truncatula]
 gi|355494968|gb|AES76171.1| Resistance protein [Medicago truncatula]
          Length = 1196

 Score =  317 bits (813), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 229/692 (33%), Positives = 349/692 (50%), Gaps = 92/692 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           + VFL+FRG D R  F  HL  AL  + I TFIDD  L RG+EI+PSL  AIE S+I I 
Sbjct: 20  YQVFLNFRGSDTRDGFTGHLYKALTDKGIHTFIDDCDLKRGDEITPSLIKAIEESRIFIP 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FS  YASS++CL+ELV I+      G++V+PVFY VDP+        Y   L       
Sbjct: 80  VFSINYASSKFCLDELVHIIHCYKTKGRLVLPVFYGVDPTQIRHQSGSYGEHLTKHEESF 139

Query: 124 ------------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                       W           G    P  E   I   V DIS K++ +     K   
Sbjct: 140 QNNKKNKERLHQWKLALTQAANLSGYHYSPGYEYKFIGKIVEDISNKINRVILHVAKYP- 198

Query: 162 VGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           VG+ES +++++  L   S E  + VG++G GG+GK+T+A AIY+ ++  FEG  F+ N+R
Sbjct: 199 VGLESRLEQVKLLLDKESDEGVHMVGLYGTGGLGKSTLAKAIYNFVADQFEGVCFLHNVR 258

Query: 221 DES----------EKVGGLANIHLNFE---------RRRLSRMKVLIVFYDLTDLKQIDL 261
           + S          E +     +++ F          + RL R K+L++  D+  L Q++ 
Sbjct: 259 ENSAHNNLKHLQKELLSKTVKVNIKFGHICEGIPIIKERLCRKKILLILDDVNQLDQLEA 318

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G LD F PGSRVIITTRD  LL  H   R    + V+ L   ++L L    AF  N  
Sbjct: 319 LAGGLDWFGPGSRVIITTRDKHLLTCHGIERT---YAVRGLYGTEALELLRWMAFKNNKV 375

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              + ++ N  + YA+G+PL L+++GS L G S EEW+  ++  +++P+  I ++LKVSY
Sbjct: 376 PPSYEDVLNRAVSYASGLPLVLEIVGSNLYGKSIEEWKGTLDGYEKIPNKKIHEILKVSY 435

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG----KSLVTISNNK 437
           D L++E+Q++FLD AC FKG        F D  R+     I+  +G    KSL+  ++  
Sbjct: 436 DALEEEQQSVFLDIACCFKGCRW---EEFEDILRYHYGHCITHHLGVLAEKSLIYQNHGY 492

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGINLDSLKE 493
           + +HDL+++MG E+VRQES K+PG++SRLW  ++I  VL ENT         +N  S++ 
Sbjct: 493 LRLHDLIKDMGKEVVRQESRKEPGEQSRLWCQDEIVHVLKENTGTSKIEMIYMNFHSMES 552

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-------------------GNLSR 534
           +        K+  ++   I +       ++ LPSS+                        
Sbjct: 553 VIDQKGKAFKKMTKLKTLIIENGHFSKGLKYLPSSLRVLKWKGCLSESLSSSILSKKFQN 612

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA-EKDF 593
           +  L L  C  L  +   + +L++L + +   C  L  + + IG+L  LE L+       
Sbjct: 613 MKVLTLNCCEYLTHIPD-VSDLQNLEKFSFMFCKNLITIDDSIGHLNKLESLDAGCCSKL 671

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           ++ P     L+ L  L L  C+ L++ PEL C
Sbjct: 672 KRFPPL--GLTSLKQLELSGCESLKNFPELLC 701



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 6/145 (4%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SLK+L L GC +LK FPE+ C   NI+ + L  T+I ELPSS  NLS L  L +  
Sbjct: 677 LGLTSLKQLELSGCESLKNFPELLCKMRNIKHIFLSRTSIGELPSSFHNLSELRSLHIFG 736

Query: 543 CSGLKSVSSRLCNL--KSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
                  + ++ ++   ++  L L  C L  E L   +    +L+ L LA+ +F+ +P  
Sbjct: 737 MFRFPKPNDKIYSVVFSNVDHLVLENCNLFDESLLIILKWCVNLKNLVLAKNNFKILPEF 796

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELP 624
           + +   L ++ +  C  L+ +  +P
Sbjct: 797 LSECHHLVEIIVDGCTSLEEIRGIP 821



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 5/127 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
             ++K L L  C  L   P++S   N+E         +  +  SIG+L++L  LD   CS
Sbjct: 610 FQNMKVLTLNCCEYLTHIPDVSDLQNLEKFSFMFCKNLITIDDSIGHLNKLESLDAGCCS 669

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK        L SL++L LSGC  L+  PE +  + +++++ L+     ++PSS   LS
Sbjct: 670 KLKRFPP--LGLTSLKQLELSGCESLKNFPELLCKMRNIKHIFLSRTSIGELPSSFHNLS 727

Query: 605 KLSDLRL 611
           +L  L +
Sbjct: 728 ELRSLHI 734


>gi|357500091|ref|XP_003620334.1| Sucrose synthase [Medicago truncatula]
 gi|355495349|gb|AES76552.1| Sucrose synthase [Medicago truncatula]
          Length = 1319

 Score =  317 bits (813), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 237/726 (32%), Positives = 374/726 (51%), Gaps = 115/726 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D RH F  +L  AL  + I+TFIDD  L RG+EI+PSL  AIE S+I I 
Sbjct: 18  YQVFLSFRGTDTRHGFTGNLYKALTDKGIKTFIDDNDLQRGDEITPSLLKAIEESRIFIP 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCP-- 120
           +FS  YA+S++CL+ELV I+      G++V+PVF+ VDP++            AG+    
Sbjct: 78  VFSINYATSKFCLDELVHIIHCYKTEGRLVLPVFFGVDPTNVRHHTGRYGEALAGHEKRF 137

Query: 121 -----SLGWMGIFDIPTSESVLIEGN----------VNDISKKLSDLF---PSDNKDQLV 162
                ++  +  + +  +++  + G           + DI K +S+     P    +  V
Sbjct: 138 QNDKNNMERLHQWKLALTQAANLSGYHSSHGYEYKFIGDIVKYISNKISRQPLHVANYPV 197

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G++S ++ ++S L  GS +  + VG++G GG+GK+T+  AIY+ IS  FE S F++N+R+
Sbjct: 198 GLQSRVQHVKSLLDEGSDDGVHMVGLYGTGGLGKSTLGKAIYNFISDQFECSCFLENVRE 257

Query: 222 ESE--------------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            S                     K+G ++   + + + RL   K L++  D+ D+KQ+  
Sbjct: 258 NSASNKLKHLQEELLLKTLQQKTKLGSVSE-GIPYIKERLHTKKTLLILDDVDDMKQLHA 316

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  D F  GSRVIITTRD  LL++H G +  H  EVK L   ++L L    AF  N  
Sbjct: 317 LAGGPDWFGRGSRVIITTRDKHLLRSH-GIKSTH--EVKGLYGTEALELLRWMAFKNNKV 373

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
            + + ++ N  + YA+G+PL L+++GS L G + EEW+  ++  +++P+  I ++LKVSY
Sbjct: 374 PSSYEDVLNRAVSYASGLPLVLEIVGSNLFGKTIEEWKGTLDGYEKIPNKKIHEILKVSY 433

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISN----- 435
           D L++E+Q++FLD AC FKG       + L A      K  +  L  KSLV IS+     
Sbjct: 434 DALEEEQQSVFLDIACCFKGCGWKEFEDILRAHYGHCIKHHLGVLAEKSLVKISSTSYSG 493

Query: 436 --NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKE 493
             N +T+HD +++MG E+VRQES K+PG+RSRLW  +DI  VL ENT          ++ 
Sbjct: 494 SINHVTLHDFIEDMGKEVVRQESPKEPGERSRLWCQDDIVNVLKENTG------TRKIEM 547

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC---SGLKSVS 550
           +Y+        FP           +E  I++   +   ++RL  L + N     GLK + 
Sbjct: 548 IYMN-------FPS----------EEFVIDKKGKAFKKMTRLKTLIIENVHFSKGLKYLP 590

Query: 551 SRLCNLK-------------------SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
           S L  LK                   +++ L L  C  L  +P ++  L++LE  +    
Sbjct: 591 SSLRVLKLRGCLSESLLSCSLSKKFQNMKILTLDRCEYLTHIP-DVSGLQNLEKFSFEYC 649

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTLSNSSTLLT 648
           ++   I +S+  L+KL  L    C +L+  P L   S   ++  +C SLK+       +T
Sbjct: 650 ENLITIHNSIGHLNKLERLSANGCSKLERFPPLGLASLNELNISYCESLKSFPKLLCKMT 709

Query: 649 RSSKHW 654
                W
Sbjct: 710 NMKTIW 715



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 20/149 (13%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SL EL +  C +LK FP++ C   N++ + L++T+I ELPSS  NL+ L  L L  
Sbjct: 682 LGLASLNELNISYCESLKSFPKLLCKMTNMKTIWLQKTSIRELPSSFQNLNELFQLTLWE 741

Query: 543 CSGLKS----------VSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEK 591
           C  L+           V S++ NL       L+ C L  E LP  +    +++ L+L+  
Sbjct: 742 CGMLRFPKQNDQMYSIVFSKVTNLV------LNNCKLSDECLPIFLKWCVNVKLLDLSRN 795

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           +F+ IP  + +   L++L L NCK L+ +
Sbjct: 796 NFKLIPECLSECHLLNNLILDNCKSLEEI 824



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 5/134 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
             ++K L L  C  L   P++S   N+E    +    +  + +SIG+L++L  L    CS
Sbjct: 615 FQNMKILTLDRCEYLTHIPDVSGLQNLEKFSFEYCENLITIHNSIGHLNKLERLSANGCS 674

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+        L SL  LN+S C  L+  P+ +  + +++ + L +    ++PSS + L+
Sbjct: 675 KLERFPP--LGLASLNELNISYCESLKSFPKLLCKMTNMKTIWLQKTSIRELPSSFQNLN 732

Query: 605 KLSDLRLQNCKRLQ 618
           +L  L L  C  L+
Sbjct: 733 ELFQLTLWECGMLR 746


>gi|224123350|ref|XP_002319057.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222857433|gb|EEE94980.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 511

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 206/516 (39%), Positives = 285/516 (55%), Gaps = 60/516 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R NF  HL  AL +  I TF DD +L +G EIS  L  AI+ S ISIV
Sbjct: 1   YDVFLSFRGEDTRKNFTDHLYTALQKAGILTFQDDDELPKGEEISSHLLKAIKESNISIV 60

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS+GYASS WCL+EL +IL+ +    QI +PVFY +DPSD       +  +        
Sbjct: 61  VFSKGYASSTWCLDELSEILDCRQTARQIFLPVFYDIDPSDIRKQTGSFAEAFDRHEERF 120

Query: 123 -----------------GWMGIFDIPT----SESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                              +  FD+ +     ES LI+  V ++  KL+  +        
Sbjct: 121 KEEMEKVQKLKNALVEAASLSGFDLHSIANGHESKLIQMIVEEVLSKLNPRYMK-VATYP 179

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S +K+I S L  G+ E   VGI+G+ GIGKTTIA A+++ I   FEGS  + NIR+
Sbjct: 180 VGIDSQVKDIISMLCVGTNEVRIVGIYGMPGIGKTTIAKAVFNQICHQFEGSSCLLNIRE 239

Query: 222 E---------------SEKVGGLANIHLNFE----RRRLSRMKVLIVFYDLTDLKQIDLL 262
                            +   G   IH + +    + +  R +VL++  D+  LK +  L
Sbjct: 240 RLDQHRGLLQLQQQLLRDAFKGYIRIHDDDDEDGIKSQFCRKRVLVILDDVDQLKHLRGL 299

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G  D F PGSR++ITTRD +LL       V   +  + L+ ++SL LFS +AF + HP 
Sbjct: 300 AGERDWFGPGSRIVITTRDERLLTR---LEVEKQYHAEGLNNDESLQLFSWHAFKKPHPM 356

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL-KRMPHMDIQKVLKVSY 381
             ++ELS +V+ Y  GVPLAL+VLGS L   S   W S + KL K +PH  IQ+ L  S 
Sbjct: 357 KEYVELSKVVVDYVGGVPLALEVLGSKLFKRSITHWRSFIEKLQKHLPHQ-IQRQLITSL 415

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITM 440
           D LD E + +FLD ACFF G D+  V   LD   F  ++G   L  +SL+T+ S N++ M
Sbjct: 416 DDLDGEVKGMFLDIACFFNGMDKDYVGKILDGRGFYPEMGFDILRERSLLTVNSENELQM 475

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
            +LL++MG EI+ Q +   PGKRSRLWH EDI  VL
Sbjct: 476 DNLLRDMGREIIHQMAPNHPGKRSRLWHREDIMDVL 511


>gi|356514963|ref|XP_003526171.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1055

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 230/670 (34%), Positives = 360/670 (53%), Gaps = 75/670 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG+D R+NF + L  AL +  I  F DD  L +G  I+P L  AIEGS++ +V
Sbjct: 28  YDVFVSFRGEDTRNNFTAFLFDALSQNCINAFKDDADLKKGESIAPELLQAIEGSRLFVV 87

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQ-IVVPVFYLVDPSD-----AGYCPS------- 121
           +FS+ YASS WCL EL  I     +     V+P+FY VDPS+     A Y  +       
Sbjct: 88  VFSKNYASSTWCLRELAHICNCTIEASPGRVLPIFYDVDPSEVRKQSAYYGIAFEEHEGR 147

Query: 122 -----------LGW---------MGIFDIPT-SESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                      L W         +  +DI   S+  +I+  V +I   L   F +     
Sbjct: 148 FREDKEKMEEVLRWREALTQVANLSGWDIRNKSQPAMIKEIVQNIKYILGPKFQNPPNGN 207

Query: 161 LVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM--- 216
           LVG+ES ++E+E  L L   ++   VGI G+GGIGKTT+A A+Y  I+  ++   F+   
Sbjct: 208 LVGMESSVEELEKCLALESVSDVRVVGISGMGGIGKTTLARALYEKIADQYDFHCFVDDV 267

Query: 217 QNIRDESEKVG---GLANIHLNFERRRLSRM--------------KVLIVFYDLTDLKQI 259
            NI   S  +G    L +  LN E   +  +              + LIV  ++  ++Q+
Sbjct: 268 NNIYRHSSSLGVQKQLLSQCLNDENLEICNVSKGTYLVSTMLRNKRGLIVLDNVGQVEQL 327

Query: 260 DLLIGRLDGFVP-----GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
            +     +  +      GSR+IIT+RD  +L+ H    V HV++V+ LS+++++ LF  N
Sbjct: 328 HMFTQSRETLLRECLGGGSRIIITSRDEHILRTHG---VNHVYQVQPLSWDNAVKLFCIN 384

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF   +  + +  L++ V+ +A G PLA++V+G  L G +  +W S +++L+     +I 
Sbjct: 385 AFKCTYIMSDYEMLTHGVLSHAQGHPLAIEVIGKSLFGRNVSQWTSTLDRLRDNKSRNIM 444

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            VL++SYD L+++++ IFLD ACFF  + +  V   L+   F  +IG+  LV KSL+TIS
Sbjct: 445 DVLRISYDDLEEKDREIFLDIACFFNDDHEQHVKEILNFRGFDPEIGLPILVEKSLITIS 504

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKEL 494
           +  I MHDLL+++G  IVR++S K+P K SRLW  EDIY+V+++N  LP      +L+ L
Sbjct: 505 DGLIHMHDLLRDLGKCIVREKSPKEPRKWSRLWDFEDIYKVMSDNMPLP------NLRLL 558

Query: 495 YLGGCSNLKRFPEI--SCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSS 551
            +  C NL   P    + N+  L+L     + +L SSIG L +L  L+L  C  L  +  
Sbjct: 559 DVSNCKNLIEVPNFGEAPNLASLNLCGCIRLRQLHSSIGLLRKLTILNLKECRSLTDLPH 618

Query: 552 RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK-DFEKIPSSMKQLSKLSDLR 610
            +  L +L  LNL GC++L ++   IG+L  L  LNL +      IP+++  L+ L  L 
Sbjct: 619 FVQGL-NLEELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCISLVSIPNTILGLNSLECLS 677

Query: 611 LQNCKRLQSL 620
           L  C +L ++
Sbjct: 678 LSGCSKLYNI 687



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 18/165 (10%)

Query: 480 TSLP-TGINLDSLKELYLGGCSNLKRFPEISCNIEDLD-LKETAIEELPSSIGNLSRLV- 536
            S+P T + L+SL+ L L GCS L     +S  + D   LK+  + E PS   ++   + 
Sbjct: 661 VSIPNTILGLNSLECLSLSGCSKLYNI-HLSEELRDARYLKKLRMGEAPSCSQSIFSFLK 719

Query: 537 ------------DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
                        L+  +   ++ +   L  L  +R L+LS C  L K+P+  GNL  LE
Sbjct: 720 KWLPWPSMAFDKSLEDAHKDSVRCLLPSLPILSCMRELDLSFC-NLLKIPDAFGNLHCLE 778

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
            L L   +FE +PS +K+LSKL  L LQ+CKRL+ LPELP  + +
Sbjct: 779 KLCLRGNNFETLPS-LKELSKLLHLNLQHCKRLKYLPELPSRTDV 822


>gi|359477821|ref|XP_003632029.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1510

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 253/742 (34%), Positives = 381/742 (51%), Gaps = 138/742 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE S+  I+
Sbjct: 20  YDVFLSFRGGDTRKNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIEESRFFII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
           IFS+ YA SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 80  IFSKNYAYSRWCLNELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 139

Query: 125 -------MGIFDIPTSESVLIEG-NVND-----ISKKLSDLF-------PSDNKDQLVGV 164
                  +  + I   E+  + G +VND     + K++ D         P      +VG+
Sbjct: 140 NQEKKEMIQKWRIALREAANLSGCHVNDQYETEVVKEIVDTIIRRLNHQPLSVGKSIVGI 199

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQNIRD 221
              +++++S +   +TE N V + GI GIG   KTTIA AIY+ IS  ++GS F+ NI++
Sbjct: 200 GVHLEKLKSLM---NTELNMVSVIGIYGIGGVGKTTIAKAIYNEISHQYDGSSFLINIKE 256

Query: 222 ESE-----------------KVGGLANIHL--NFERRRLSRMKVLIVFYDLTDLKQIDLL 262
            S+                 K   + N++   +  +R L   +VL++F D+ +LKQ++ L
Sbjct: 257 RSKGDILQLQQELLHGILRGKFFKINNVNEGNSMIKRCLRSNRVLVIFDDVDELKQLEYL 316

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
               D F   S +IIT+RD  +L  +    V   +EV +L+  +++ LFS  AF QN P 
Sbjct: 317 AEEKDWFHAKSTIIITSRDKHVLAQYG---VDIPYEVSKLNKEEAIELFSLWAFKQNRPQ 373

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             +  LS  +I YA+G+PLAL+VLG+ L G     WESA+ KLK +PHM+I  VL++S+D
Sbjct: 374 EVYKNLSYNIIDYADGLPLALKVLGASLFGKKISNWESALCKLKIIPHMEIHNVLRISFD 433

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
           GLDD E+ IFLD ACFFKG+D+  V   L      A+  I+ L  + L+T+S N + MHD
Sbjct: 434 GLDDIEKGIFLDIACFFKGDDRDFVSRILGP---HAEHAITTLDDRCLITVSKNMLDMHD 490

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLW--HPEDI----------YQVLNE------------ 478
           L+Q+MG EI+RQE  +DPG+RSRLW  +  D+          ++ +N             
Sbjct: 491 LIQQMGWEIIRQECPEDPGRRSRLWDSNANDVLIRNKITTESFKEMNRLRLLNIHNPRED 550

Query: 479 ----NTSLPTGINLDSLKELYLGGCSNLKRFPEISC-------NIEDLDLKETAIEEL-- 525
                  LP      S +  YL    +   +P  S        N+  L L+ + I+++  
Sbjct: 551 QLFLKDHLPRDFEFSSYELTYL----HWDGYPLESLPMNFHAKNLVQLVLRGSNIKQVWR 606

Query: 526 PSSIGNLSRLVDLDLT-NCSGLKSVSSRLCNLKSLRRL--NLSGCLKLEKLPEEI----- 577
            + + +  R++DL  + +  G+   SS + NL+ L  +   + GC+ LE LP  I     
Sbjct: 607 GNKLHDKLRVIDLSYSFHLIGIPDFSS-VPNLEILILIGCTMHGCVNLELLPRNIYKLKH 665

Query: 578 -------------------GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
                              GN+  L  L+L+      +PSS+  L+ L  L LQ C +L 
Sbjct: 666 LQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQTLLLQECSKLH 725

Query: 619 SLPELPCGSSIHARHCTSLKTL 640
            +P       IH  H +SL+ L
Sbjct: 726 KIP-------IHICHLSSLEVL 740



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP  I  L  L+ L   GCS L+RFPEI  N+  L   DL  TAI +LPSSI +L+ L  
Sbjct: 656 LPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQT 715

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKI 596
           L L  CS L  +   +C+L SL  L+L  C  +E  +P +I +L SL+ LNL    F  I
Sbjct: 716 LLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSI 775

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P+++ QLS L  L L +C  L+ + ELP
Sbjct: 776 PTTINQLSSLEVLNLSHCNNLEQITELP 803



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 9/151 (5%)

Query: 517  LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
             K + + E+P  IGN   L  L L +C  L S+ S +   KSL  L+ SGC +LE +PE 
Sbjct: 1080 FKGSDMNEVPI-IGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEI 1138

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS----IHAR 632
            + ++ESL  L+L+    ++IPSS+++L  L  L L NCK L +LPE  C  +    +   
Sbjct: 1139 LQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVE 1198

Query: 633  HCTSLKTLSNS----STLLTRSSKHWDIFNF 659
             C S K L ++     +LL  S    D  NF
Sbjct: 1199 SCPSFKKLPDNLGRLQSLLHLSVGPLDSMNF 1229



 Score = 45.8 bits (107), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 28/155 (18%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIG----- 530
            TSLP+ I    SL  L   GCS L+  PEI  ++E L    L  TAI+E+PSSI      
Sbjct: 1109 TSLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGL 1168

Query: 531  -------------------NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
                               NL+ L  L + +C   K +   L  L+SL  L++     + 
Sbjct: 1169 QYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMN 1228

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                 +  L SL  L L   +  +IPS +  LS L
Sbjct: 1229 FQLPSLSGLCSLRQLELQACNIREIPSEICYLSSL 1263


>gi|357499629|ref|XP_003620103.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
 gi|355495118|gb|AES76321.1| Disease resistance-like protein GS3-4 [Medicago truncatula]
          Length = 1075

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 249/716 (34%), Positives = 365/716 (50%), Gaps = 123/716 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFL+FRG D R+ F  +L  ALC   + TFID K L+ G+ I+ SL  AIE S+I I 
Sbjct: 19  YDVFLNFRGTDTRYGFTGNLYKALCDGGVRTFIDHKDLHEGDRITQSLVKAIEESRILIP 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           +FS+ YASS +CL+ELV I+    + G  V P+F  V+PS                    
Sbjct: 79  VFSKNYASSLFCLDELVHIIHRYEEKGCFVFPIFCDVEPSHVRHQTGSYGEALAKHEERF 138

Query: 117 -----GYCPSLGWMGIFDIPTSESVLIEGN----------------VNDISKKLSDLFPS 155
                 Y  ++  +  + +  +++  + G+                V  +S KL+ +   
Sbjct: 139 QNNKENYNDNMKRLHKWKMALNQAANLSGHHFNPRNGYEFEFIREIVKYVSNKLNHVL-L 197

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
              D  VG++  + ++ S L  GS +    +GI+G GGIGKTT+A A+Y+ I+  FE   
Sbjct: 198 HVVDYPVGLQHRVLKVNSLLKVGSNDKVKMLGIYGPGGIGKTTLAKAVYNFIAGQFECVC 257

Query: 215 FMQNIRDESEKVG-----------------GLANIH--LNFERRRLSRMKVLIVFYDLTD 255
           F+ N+R+ S K G                  LA+    +   ++RL + KVL++  D+  
Sbjct: 258 FLHNVRENSAKHGLEHLQKDLLSKIVGLDIKLADTSEGIPIIKQRLQQKKVLLILDDINK 317

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           LKQ+  + G  D F  GSRVI+TTRD  LL +H G  V   +E  EL+  ++L L    A
Sbjct: 318 LKQLQAMAGGTDWFGAGSRVIVTTRDKNLLASH-GIEV--TYETHELNKKEALELLRWKA 374

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F      + +  + N  I YA G+PLAL++LGS L G   EEW S +++ +R+P  +IQK
Sbjct: 375 FKAKQVDSSYECILNRAINYAAGLPLALEILGSNLYGKHIEEWNSLLDRYERIPSEEIQK 434

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC---RFSAKIGISRLVGKSLVT 432
           +L+VS+D L+++E+++FLD AC FKG     V + L A    R    IG+  LV KSLV 
Sbjct: 435 ILRVSFDALEEDERSVFLDIACCFKGYKLKEVEDMLCAHYGQRMRYHIGV--LVKKSLVK 492

Query: 433 ISNNK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS---------- 481
           I N + +T+HDL+++MG EIVRQES K+PGKRSRL   EDI+QVL EN+           
Sbjct: 493 IINERFVTLHDLIEDMGKEIVRQESPKEPGKRSRLSFHEDIFQVLEENSGTSQIEIIRLD 552

Query: 482 --LPTGI---NLDSLKELYLGGCSNLKR-------FPEISCNIED-------LDLKETAI 522
             LP  I     D LK++      NLK        FP+   ++ D         L++   
Sbjct: 553 FPLPQAIVEWKGDELKKM-----KNLKTLIVKTSFFPKPHVHLPDNLRVLEWHSLRDIPS 607

Query: 523 EELPS--SIGNLSR-----------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
           E LP   SI  L +           L  L L  C  L+ +S  +  L++L   +   C K
Sbjct: 608 EFLPKNLSICKLRKSCPTSFKMFMVLKVLHLDECKRLREISD-VSGLQNLEEFSFQRCKK 666

Query: 570 LEKLPEEIGNLESLEYLNLAE--KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           L  + + IG L  L+ LN AE  +  +  P    QL+ L  LRL  C RL++ PE+
Sbjct: 667 LRTIHDSIGFLNKLKILN-AEGCRKLKSFPPI--QLTSLELLRLSYCYRLRNFPEI 719



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 6/145 (4%)

Query: 481 SLPTGINL-DSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLV 536
           S PT   +   LK L+L  C  L+   ++S   N+E+   +    +  +  SIG L++L 
Sbjct: 622 SCPTSFKMFMVLKVLHLDECKRLREISDVSGLQNLEEFSFQRCKKLRTIHDSIGFLNKLK 681

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+   C  LKS       L SL  L LS C +L   PE +G +E+LE + L E   +++
Sbjct: 682 ILNAEGCRKLKSFPP--IQLTSLELLRLSYCYRLRNFPEILGKMENLESIFLKETSIKEL 739

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP 621
           P+S + LS L +L L   +    LP
Sbjct: 740 PNSFQNLSGLRNLLLDGFRMFLRLP 764


>gi|297848238|ref|XP_002892000.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337842|gb|EFH68259.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 244/742 (32%), Positives = 375/742 (50%), Gaps = 121/742 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +HDVF SF GKDVR  F+SH+     R+ I  F+D+++ RG  I P L  AI+GSKI++V
Sbjct: 21  EHDVFPSFHGKDVRKAFLSHILKEFGRKAINFFVDNEIKRGEFIGPELKRAIKGSKIALV 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           + S+ YASS WCL+EL +I+  K + GQ V+ +FY VDP+D                   
Sbjct: 81  LLSKNYASSSWCLDELAEIM--KQESGQTVITIFYEVDPTDVKKQKGDFGKVFKKTCKGK 138

Query: 116 ------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDN 157
                             AGY  S  W+        E+ +IE    +IS KL+ L P  +
Sbjct: 139 DKEKIKTWRKALEDVATIAGYHSS-NWV-------DEAAMIENIAAEISNKLNHLTPLRD 190

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
            D L+G+E+ +K +E  L     E   +GIWG  GIGKTTIA  +++ +SS F+ S  ++
Sbjct: 191 FDCLIGMEAHMKRMEQYLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSSRFQNSALIE 250

Query: 218 NIRDESEK-VGGLANIHLNFERRRLSRM---------------------KVLIVFYDLTD 255
           +I+    K      N  L  + + LSRM                      V +V  D+  
Sbjct: 251 DIKGSYPKPCFDEYNAKLQLQYKMLSRMINQKDIMIPHLGVAQERLRNRNVFLVLDDVDR 310

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L Q++ L   +  F P SR+IITT D  LL  H    + H+++V   S +++L +F   A
Sbjct: 311 LAQLEALANNVQWFGPRSRIIITTEDRSLLNAHG---INHIYKVGFPSNDEALQMFCMYA 367

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           FGQ  P  GF EL+  +      +PL L+V+GS+ +G+S+E+W   +++L+     DI+ 
Sbjct: 368 FGQKSPKDGFYELAREITYLVGELPLGLRVIGSHFRGLSKEQWSMEISRLRTNLDGDIES 427

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSL 430
           +LK S+D L DE++++FL  ACFF        ++++   F D    S ++ +  LV KSL
Sbjct: 428 ILKFSFDALCDEDKDLFLHIACFFNNENINKLEEFIGQRFKD---LSQRLYV--LVEKSL 482

Query: 431 VTISNN----KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN---ENTSLP 483
           ++I        I MH+LL ++G EIVR+ES ++PG+R  L+  +DI +V++    NT   
Sbjct: 483 ISIERFLEYVSIKMHNLLAQLGKEIVRKES-REPGQRRFLFDNKDICEVVSGYTTNTGSV 541

Query: 484 TGINLDS---LKELYLGGCSNLKRFPEISCNIEDLDL------------KETAIE--ELP 526
            GI+ DS   + E    G  NL+    +  N +  ++            K   IE    P
Sbjct: 542 VGIDSDSWLNITEKAFEGMPNLQFLRVVVYNFDHPNIISSSGPLTFISSKLRLIEWWYFP 601

Query: 527 SS----IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
            +    I NL  LV+L +   S L+ +   +  L++L+ ++L+    L++LP  +    S
Sbjct: 602 MTSLRFINNLEFLVELKM-RYSKLEKLWDGIKLLRNLKCMDLANSENLKELP-NLSMATS 659

Query: 583 LEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTL 640
           LE LNL       ++PSS+  L+ L  L L+ C RL SLP+LP    +  A +C SL+ L
Sbjct: 660 LEELNLEGCSSLVELPSSVGNLTNLQKLSLEGCSRLVSLPQLPDSPMVLDAENCESLEKL 719

Query: 641 SNSSTLLTRSSKHWDIFNFSNC 662
             S         H    NF+NC
Sbjct: 720 DCS---FYNPCIH---LNFANC 735



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 88/185 (47%), Gaps = 25/185 (13%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK + L    NLK  P +S   ++E+L+L+  +++ ELPSS+GNL+ L  L L  CS
Sbjct: 634 LRNLKCMDLANSENLKELPNLSMATSLEELNLEGCSSLVELPSSVGNLTNLQKLSLEGCS 693

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE--KDFEKIPSSMKQ 602
            L S+        S   L+   C  LEKL     N     +LN A   K  ++    + Q
Sbjct: 694 RLVSLPQLP---DSPMVLDAENCESLEKLDCSFYN--PCIHLNFANCFKLNQEARDLLIQ 748

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTL----SNSSTLLTRSSKHWDIF 657
            S    + L  C RL SLP+LP    + +A +C SL+ L    SN  T L          
Sbjct: 749 TSTARLVVLPGCSRLVSLPQLPDSLMVLNAENCESLEKLDCSFSNPGTWL---------- 798

Query: 658 NFSNC 662
           NFS C
Sbjct: 799 NFSYC 803


>gi|227438245|gb|ACP30612.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 886

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 252/774 (32%), Positives = 371/774 (47%), Gaps = 171/774 (22%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SFRG+DVR NF+SH +  L  +  +TF DD + R   I P L  AI  S+ISIV
Sbjct: 21  RYHVFSSFRGEDVRKNFLSHFHKELKLKGNDTFKDDGIKRSTSIWPELKQAIWESRISIV 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           + S  YA S WCLNELV+I+E +   GQ ++P+FY VDPSD                   
Sbjct: 81  VLSMNYAGSSWCLNELVEIMECREVSGQTLMPIFYEVDPSDVRKQKGEFGKAFEKICAGR 140

Query: 116 ------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDN 157
                             AG C S  W        +++ +IE  V D+S++L+    S +
Sbjct: 141 TVEETQRWRQALTNVGSIAGECSS-NW-------DNDAEMIEKIVADVSEELNRCTTSKD 192

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS----HFEGS 213
            D LVG+E+ + ++ S L   S E   +GIWG  GIGKTTIA A+YS +S+    +F+ +
Sbjct: 193 FDGLVGLEAHVAKLCSMLCLESNEVRMIGIWGPIGIGKTTIARALYSQLSAAADDNFQLN 252

Query: 214 YFMQNIRDESEK--VGG-----------LANI---------HLNFERRRLSRMKVLIVFY 251
            FM+N++    +  + G           L+ I         HL   + RL   K LIV  
Sbjct: 253 IFMENVKGSCRRNELDGYSLKLHLQERFLSEIFNKRDIKISHLGVAQERLKNQKALIVLD 312

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+ +L+Q+  L  +   F  G+R+I+TT D QLLK H    + HV+EV   S +++  + 
Sbjct: 313 DVDELQQLHALADQTQWFGNGTRIIVTTEDKQLLKAH---GISHVYEVGFPSKDEAFKIL 369

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
            R AFGQN    GF +L+  V + +  +PL+L VLG+ L+G+S+EEW  A+ +L+   + 
Sbjct: 370 CRYAFGQNSAPEGFYDLAVEVSQLSGNLPLSLSVLGASLRGVSKEEWTKALPRLRTSLNG 429

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
            I+KVL V YD LD++++ IFL  AC F G     V+ FL       + G+  LV +SL+
Sbjct: 430 KIEKVLGVCYDSLDEKDRLIFLHIACLFNGEKVERVIQFLAKSELEVEFGLKVLVDRSLL 489

Query: 432 TISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINL 488
            I ++  I MH LLQ+MG EI+R + I +PGKR  L   +DI  VL + T   T  GI+L
Sbjct: 490 HICDDGNIVMHCLLQQMGKEIIRGQCIDEPGKRKFLVDAKDISDVLVDATGTETVLGISL 549

Query: 489 DSLK---------------------ELY---------LGGCSNLKRFPE----------- 507
           D  K                      LY         L     L R P            
Sbjct: 550 DMSKINDDVCISEKAFDRMHNLQFLRLYTNFQDESFKLCLPHGLDRLPHKLRLLHWDSYP 609

Query: 508 ISCN--------IEDLDLKETAIEELPSSIGNLSRLVDLDLTN----------------- 542
           I C         + +L ++++ +E+L   I  L+ L  +DL+                  
Sbjct: 610 IKCMPSRFRPEFLVELSMRDSKLEKLWEGIQPLTSLKQMDLSASTKIKDIPNLSKATNLE 669

Query: 543 ------CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-------- 588
                 C  L SV S L NL  L+ L++S C++L  LP  + NLESL  LN+        
Sbjct: 670 KLYLRFCKALASVPSSLQNLNKLKVLDMSSCVRLNALPTNM-NLESLSVLNMKGCSKLRI 728

Query: 589 -------------AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
                         E   E++P S+    +L  L +  CK+L++ P+LP    +
Sbjct: 729 FPEISSQVKFMSVGETAIEEVPLSISLWPQLISLEMSGCKKLKTFPKLPASVEV 782



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 27/141 (19%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT +NL+SL  L + GCS L+ FPEIS  ++ + + ETAIEE+P SI    +L+ L++
Sbjct: 705 ALPTNMNLESLSVLNMKGCSKLRIFPEISSQVKFMSVGETAIEEVPLSISLWPQLISLEM 764

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           + C  LK+                       KLP       S+E L+L+    E+IP  +
Sbjct: 765 SGCKKLKT---------------------FPKLP------ASVEVLDLSSTGIEEIPWGI 797

Query: 601 KQLSKLSDLRLQNCKRLQSLP 621
           +  S+L  + + NCK+L+ +P
Sbjct: 798 ENASQLLIMCMANCKKLKCVP 818



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 482 LPTGINL-DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +P  I+L   L  L + GC  LK FP++  ++E LDL  T IEE+P  I N S+L+ + +
Sbjct: 749 VPLSISLWPQLISLEMSGCKKLKTFPKLPASVEVLDLSSTGIEEIPWGIENASQLLIMCM 808

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            NC  LK V   +  +K L  ++LSGC +L  L
Sbjct: 809 ANCKKLKCVPPSIYKMKHLEDVDLSGCSELRPL 841


>gi|356532658|ref|XP_003534888.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Glycine max]
          Length = 1072

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 256/724 (35%), Positives = 381/724 (52%), Gaps = 109/724 (15%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P  K+DVF+SFRG+D+R  F+SHL     R+KI  F+D  L +G+EI PSL  AI GS I
Sbjct: 7   PEIKYDVFVSFRGQDIRDGFLSHLIDTFERKKINFFVDYNLEKGDEIWPSLVGAIRGSLI 66

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLG-WMGIFDI 130
            +VIFS  YASS WCL ELVKILE + +YG+IV+PVFY + P+   +   LG +   F +
Sbjct: 67  LLVIFSPDYASSCWCLEELVKILECREEYGRIVIPVFYHIQPTHVRH--QLGSYAEAFAV 124

Query: 131 PTSESVLIEGNVNDISKKLSDL-------FPSDNK--------------------DQLVG 163
              + ++   +      K +DL       FP+D                        LVG
Sbjct: 125 HGRKQMMKVQHWRHALNKSADLAGIDSSKFPNDAAVLNEIVDLVLKRLVKPHVISKGLVG 184

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +E  I  +ES +     +   +GIWG+GGIGKTT+A  I++ +   +EG YF+ N R+ES
Sbjct: 185 IEEKITTVESWIRKEPKDNLLIGIWGMGGIGKTTLAEEIFNKLQYEYEGCYFLANEREES 244

Query: 224 EKVGGLA---------------NIHLNFER-------RRLSRMKVLIVFYDLTDLKQIDL 261
           +  G ++               ++ +  E        RR+  MKVLIV  D++D   +  
Sbjct: 245 KNHGIISLKKRIFSGLLRLRYDDVEIYTENSLPDNILRRIGHMKVLIVLDDVSDSDHLGK 304

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G LD F  GSR+++TTRD Q+LK     +V   + + ELS++ +L LF+ NAF Q+  
Sbjct: 305 LLGTLDNFGSGSRILVTTRDEQVLK---AKKVKKTYHLTELSFDKTLELFNLNAFNQSDR 361

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              + ELS  V+ YA G+PL ++VL   L G ++EEWES ++KLK++P   + +V+K+SY
Sbjct: 362 QKEYYELSLRVVNYAKGIPLVVKVLAGLLHGKNKEEWESLLDKLKKIPPTKVYEVMKLSY 421

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF-----------SAKIGISRLVGKSL 430
           DGLD +EQ IFLD ACFF  ++   +M  ++ C             S    + RL  K+L
Sbjct: 422 DGLDRKEQQIFLDLACFFLRSN---IM--VNTCELKSLLKDTESDNSVFYALERLKDKAL 476

Query: 431 VTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGIN 487
           +TIS +N ++MHD LQEM  EI+R+ES    G  SRLW  +DI + L   +NT     + 
Sbjct: 477 ITISEDNYVSMHDSLQEMAWEIIRRES-SIAGSHSRLWDSDDIAEALKNGKNTEDIRSLQ 535

Query: 488 LD--SLKELYLGG--CSNLKR--FPEISCNIED---------LDLKET----------AI 522
           +D  +LK+  L     +N+ +  F +IS    D         L   ET           +
Sbjct: 536 IDMRNLKKQKLSHDIFTNMSKLQFLKISGKYNDDLLNILAEGLQFLETELRFLYWDYYPL 595

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NL 580
           + LP +     RLV L+      +K +   + NL +L++++L+   KLE+LP+  G  NL
Sbjct: 596 KSLPENFIA-RRLVILEFP-FGRMKKLWDGVQNLVNLKKVDLTSSNKLEELPDLSGATNL 653

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL---QSLPELPCGSSIHARHCTSL 637
           E L+    +      +  S+  L KL  L L NCK L    S  +L   S ++   C +L
Sbjct: 654 EELKLGGCSM--LTSVHPSIFSLPKLEKLFLINCKSLTIVTSDSKLCSLSHLYLLFCENL 711

Query: 638 KTLS 641
           +  S
Sbjct: 712 REFS 715



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 18/182 (9%)

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV 549
           SL  LYL  C NL+ F  IS N+++L L  T +  LPSS G  S+L  LDL   S ++ +
Sbjct: 699 SLSHLYLLFCENLREFSLISDNMKELRLGWTNVRALPSSFGYQSKLKSLDLRR-SKIEKL 757

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-----KDFEKIPSSMKQLS 604
            S + NL  L  L++  C +L+ +PE    LE L+    AE     +   ++P  +K L+
Sbjct: 758 PSSINNLTQLLHLDIRYCRELQTIPELPMFLEILD----AECCTSLQTLPELPRFLKTLN 813

Query: 605 KLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT-LSNSSTLLTRSSKHWDIFNFSNC 662
                 ++ CK L +LP LP    ++ A  C SLKT L + ST + +  ++     F NC
Sbjct: 814 ------IRECKSLLTLPVLPLFLKTLDASECISLKTVLLSPSTAVEQLKENSKRILFWNC 867

Query: 663 SN 664
            N
Sbjct: 868 LN 869



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 23/177 (12%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           NL +LK++ L   + L+  P++S   N+E+L L   + +  +  SI +L +L  L L NC
Sbjct: 626 NLVNLKKVDLTSSNKLEELPDLSGATNLEELKLGGCSMLTSVHPSIFSLPKLEKLFLINC 685

Query: 544 SGLKSVSS--RLCNL--------KSLRRLNLS---------GCLKLEKLPEEIGNLESLE 584
             L  V+S  +LC+L        ++LR  +L          G   +  LP   G    L+
Sbjct: 686 KSLTIVTSDSKLCSLSHLYLLFCENLREFSLISDNMKELRLGWTNVRALPSSFGYQSKLK 745

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTL 640
            L+L     EK+PSS+  L++L  L ++ C+ LQ++PELP    I  A  CTSL+TL
Sbjct: 746 SLDLRRSKIEKLPSSINNLTQLLHLDIRYCRELQTIPELPMFLEILDAECCTSLQTL 802


>gi|359493225|ref|XP_002264620.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1448

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 214/548 (39%), Positives = 306/548 (55%), Gaps = 77/548 (14%)

Query: 14  PKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKIS 72
           P +DVFLSFRG D R NF  +L   L R  I+TF D ++L +G  I+  LS AI+ S+I 
Sbjct: 17  PNYDVFLSFRGVDTRKNFTDYLYTTLVRYGIQTFRDNEELEKGGIIASDLSRAIKESRIF 76

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF---- 128
           ++IFS+ YA SRWCLNELVKI E   + G +V+P+FY VDPSD          GIF    
Sbjct: 77  MIIFSKNYAYSRWCLNELVKITECARQEGSMVLPIFYHVDPSDIR-----KQSGIFGDAL 131

Query: 129 -----DIPTSESVLIEGNVNDISKKLS-------DLFPSDNKDQLVGV------------ 164
                D    +  +I+     +++  S       D F ++  ++++              
Sbjct: 132 AHHERDADEKKKEMIQKWRTALTEAASLSGWHVDDQFETEVVNEIINTIVGSLKRQPLNV 191

Query: 165 -ESIIK---EIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQ 217
            E+I+     +E   L  +TE N V + GI G G   KTTIA AIY+ IS  ++ S F++
Sbjct: 192 SENIVGISVHLEKLKLMMNTELNKVSVIGICGPGGIGKTTIAEAIYNKISYQYDSSSFLR 251

Query: 218 NIRDES-----------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQ 258
           NIR++S                 EK   ++NI   +   +R L+  +VL++  D+ DLKQ
Sbjct: 252 NIREKSQGDTLQLQNELLHDILKEKGFKISNIDEGVTMIKRCLNSKRVLVILDDVDDLKQ 311

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L  + D F   S +IIT+RD Q+L  +    V   +EV++    +++ LFS  AF +
Sbjct: 312 LKHLAEKKDWFNAKSTIIITSRDKQVLARYG---VDTPYEVQKFDKKEAIELFSLWAFQE 368

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           N P   +  LS  +I+YA+G+PLAL++LG+ L G    EWESA+ KLKR+PHM+I KVL+
Sbjct: 369 NLPKEAYENLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLR 428

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           +S+DGLDD ++ IFLD ACFFKG  +  V   L      A+ GI+ L  K L+TIS N +
Sbjct: 429 ISFDGLDDMDKEIFLDVACFFKGKSKDFVSRILGP---HAEYGIATLNDKCLITISKNMM 485

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGG 498
            MHDL+Q+MG EI+RQE   D G+RSR+W   D Y VL  N      +   S+K L+L  
Sbjct: 486 DMHDLIQQMGKEIIRQECPDDLGRRSRIWD-SDAYDVLTRN------MGTRSIKGLFLDI 538

Query: 499 CSNLKRFP 506
           C    +FP
Sbjct: 539 C----KFP 542



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 94/167 (56%), Gaps = 17/167 (10%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I    SL  L   GCS L+ FPEI  ++E    LDL  +AI+E+PSSI  L  L 
Sbjct: 1013 SLPSSICEFKSLTTLCCEGCSQLESFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQ 1072

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            DL+L  C  L ++   +CNL SL+ L +  C +L+KLPE +G L+SLE L +  KDF+ +
Sbjct: 1073 DLNLAYCKNLVNLPESICNLTSLKTLTIKSCPELKKLPENLGRLQSLEILYV--KDFDSM 1130

Query: 597  PSSMKQLSKLSD---LRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
               +  LS L     LRL NC     L E+P G      H TSL+ L
Sbjct: 1131 NCQLPSLSGLCSLRILRLINC----GLREIPSGIC----HLTSLQCL 1169



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 13/130 (10%)

Query: 512  IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
             ED D+KE  I E P  +  L       L  C  LKS+ S +C  KSL  L   GC +LE
Sbjct: 983  FEDSDMKELPIIENPLELDGLC------LRGCKYLKSLPSSICEFKSLTTLCCEGCSQLE 1036

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
              PE + ++E L+ L+L     ++IPSS+++L  L DL L  CK L +LPE  C      
Sbjct: 1037 SFPEILEDMEILKKLDLGGSAIKEIPSSIQRLRGLQDLNLAYCKNLVNLPESIC------ 1090

Query: 632  RHCTSLKTLS 641
             + TSLKTL+
Sbjct: 1091 -NLTSLKTLT 1099



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 48/92 (52%), Gaps = 6/92 (6%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSS--IGNLSRL 535
           LP GI     L+ L  G CS LKRFPEI  N   + +LDL  TAIEELPSS   G+L  L
Sbjct: 680 LPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFGHLKAL 739

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
             L    CS L  + +   +L      +L+ C
Sbjct: 740 KILSFRGCSKLNKIPTDTLDLHGAFVQDLNQC 771



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLKETA-IEELP--SSIGNLSR 534
           SLPT  +   L EL L G SN+K   R  ++   +  ++L  +  + E+P  SS+ NL  
Sbjct: 610 SLPTNFHAKDLVELILRG-SNIKQLWRGNKLHNKLNVINLSHSVHLTEIPDFSSVPNLEI 668

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           L    L  C  L+ +   +   K L+ L+   C KL++ PE  GN+  L  L+L+    E
Sbjct: 669 LT---LKGCVKLECLPRGIYKWKHLQTLSCGDCSKLKRFPEIKGNMRKLRELDLSGTAIE 725

Query: 595 KIP--SSMKQLSKLSDLRLQNCKRLQSLP 621
           ++P  SS   L  L  L  + C +L  +P
Sbjct: 726 ELPSSSSFGHLKALKILSFRGCSKLNKIP 754


>gi|224095409|ref|XP_002310389.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222853292|gb|EEE90839.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 560

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 203/523 (38%), Positives = 294/523 (56%), Gaps = 67/523 (12%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I TF DD +L RG EIS  L  AI+ SK
Sbjct: 11  PQWAYDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISQHLLEAIQESK 70

Query: 71  ISIVIFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
           I IV+FS+GYASSRWCL+ELV+IL+ K  K GQI +P+FY +DPSD       +  +   
Sbjct: 71  ICIVVFSKGYASSRWCLDELVEILKCKYRKTGQIALPIFYDIDPSDVRKQTGSFAEAFVK 130

Query: 123 -----------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNK 158
                                  GW  + D+    E+  I+  + ++  KLS   P D  
Sbjct: 131 HEERSEEKVKEWREALEEAGNLSGW-NLKDMTNGHEAKFIQHIIKEVWNKLS---PKDMN 186

Query: 159 --DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
                VG++ ++ EI   + +G+ +   VGI G+ GIGKTTIA  ++  +   FEGS F+
Sbjct: 187 VGTHPVGIDPLVNEIRDFVSNGTEKVCIVGIHGMPGIGKTTIAKEVFDKLCDEFEGSSFL 246

Query: 217 QNIRDESE-KVGGLANIHL-------------NFER------RRLSRMKVLIVFYDLTDL 256
            N++++SE K   L    L             N +R       RL   +VL+V  D+   
Sbjct: 247 LNVKEKSESKDMVLLQKQLLHDILRQNTEKINNVDRGKVLIKERLPHKRVLVVVDDVARP 306

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q+  L+G      PGSRVIITTRD  LL           ++V+EL+ ++SL LF R+AF
Sbjct: 307 DQLLDLMGEPSWLGPGSRVIITTRDESLL-----LEADQRYQVQELNRDNSLQLFCRHAF 361

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
               PA  ++ELSN V++Y  G+PLAL+VLGS L G ++  WES +++L++ P+ +IQK 
Sbjct: 362 RDTKPAKDYVELSNDVVEYCGGLPLALKVLGSCLYGKNQARWESVIDRLRKFPNSEIQKK 421

Query: 377 LKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTIS 434
           L++S+D LD+   +N FLD ACFF G  +  V   L+    ++ +     L+ +SL+ + 
Sbjct: 422 LRISFDTLDESTLKNTFLDIACFFIGRKKEYVAKVLEGRYGYNPEDDFGTLIERSLIKVD 481

Query: 435 NN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           ++  I MHDLL+ MG EIV++ES ++P +RSR+W  ED + VL
Sbjct: 482 DSGTIGMHDLLRGMGREIVKEESPENPAQRSRIWSQEDAWIVL 524


>gi|357499339|ref|XP_003619958.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494973|gb|AES76176.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1109

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 244/740 (32%), Positives = 362/740 (48%), Gaps = 138/740 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG D R  F  HL  ALC + I TFIDDK L RG+EI+PSL  +IE S+I+I+
Sbjct: 20  YDVFISFRGIDTRSGFTGHLYKALCDKGIRTFIDDKELQRGDEITPSLLKSIEHSRIAII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           +FSE YA+S +CL+ELV I+    + G++V+PVFY V+PS                    
Sbjct: 80  VFSENYATSSFCLDELVHIINYFKEKGRLVLPVFYGVEPSHVRHQNNKYGEALTEFEEMF 139

Query: 117 -----------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                       +  +L  +G      F     E   I+  V +ISKK++          
Sbjct: 140 QNNKENMDRLQKWKIALNQVGNLSGFHFKKDAYEYEFIKKIVTEISKKINRGLLEVADHP 199

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           +VG+ES +  + S L  G  +    +GI G GG+GKTT+  A+Y+ I+  F+G  F+ ++
Sbjct: 200 IVGLESRLLHVMSLLDVGCDDGACMIGICGSGGLGKTTLTRALYNLIADQFDGLCFLHSV 259

Query: 220 RDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           R+ S K G                   G  +  +   + RL + KVL++  D+   KQ+ 
Sbjct: 260 RENSIKYGLEHLQKQLLSKTLGEEFNFGHVSEGIPIIKDRLHQKKVLLILDDVDKPKQLK 319

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           +L+G      PGSRVIITTRD  LL  H  +R+   +++  L+  ++L LF + AF  N 
Sbjct: 320 VLVGEPGWLGPGSRVIITTRDRHLLSCHGITRI---YDLDGLNDKEALELFIKMAFKSNI 376

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
             + +  + N  +KY +G+PLA++V+GS L G S EEWES ++K +R P  DIQ + KVS
Sbjct: 377 IDSSYDYILNRAVKYTSGLPLAIEVVGSNLFGKSIEEWESTLDKYERTPPEDIQNIFKVS 436

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD-ACRFSAKIGISRLVGKSLVTI------ 433
           +D LD EE+++FLD  C FKG     V   L     +  K  I  LV KSL+        
Sbjct: 437 FDALDKEEKSVFLDIVCCFKGCPLAYVEKILHFHYGYCIKSHIGVLVEKSLIKTYIEYDW 496

Query: 434 ----SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT--------- 480
               +N  +T+HDL++  G EIV+QES ++PG+RSRLW  +DI  VL EN          
Sbjct: 497 RRRPTNVIVTLHDLIEHTGKEIVQQESPEEPGERSRLWCQDDIVHVLKENIGTSKIEMIY 556

Query: 481 -SLPTG-----------INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
            + PT              +  LK L +      K    +   +  L       E + SS
Sbjct: 557 LNFPTKNSEIDWNGKAFKKMTKLKTLIIENGQFSKGPKHLPSTLRVLKWNRYPSESMSSS 616

Query: 529 IGN--LSRLVDLDLTNCSGLKSVS--SRLCNL--------KSLRRLNLS----------- 565
           + N    ++  L + NC  L ++S  S L NL        KSL R++ S           
Sbjct: 617 VFNKTFEKMKILKIDNCEYLTNISDVSFLPNLEKISFKNCKSLVRIHDSIGFLSQLQILN 676

Query: 566 ------------------------GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                                   GC  L+K PE +G +E+++ + L +   E++P S  
Sbjct: 677 AADCNKLLSFPPLKLKSLRKLKLSGCTSLKKFPEILGKMENIKKIILRKTGIEELPFSFN 736

Query: 602 QLSKLSDLRLQNCKRLQSLP 621
            L  L+DL ++ C +L SLP
Sbjct: 737 NLIGLTDLTIEGCGKL-SLP 755



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 36/184 (19%)

Query: 498 GCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC 554
           GC++LK+FPEI     NI+ + L++T IEELP S  NL  L DL +  C  L S+ S + 
Sbjct: 701 GCTSLKKFPEILGKMENIKKIILRKTGIEELPFSFNNLIGLTDLTIEGCGKL-SLPSSIL 759

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLES----------------------------LEYL 586
            + +L  +++ G  +L  LP++  NL S                            +E L
Sbjct: 760 MMLNLLEVSIFGYSQL--LPKQNDNLSSTLSSNVNVLRLNASNHEFLTIALMWFSNVETL 817

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSST 645
            L+    + +P S+K    +  + L  C+ L+ +  +P    ++ A  C SL T S+ S 
Sbjct: 818 YLSGSTIKILPESLKNCLSIKCIDLDGCETLEEIKGIPPNLITLSALRCKSL-TSSSKSM 876

Query: 646 LLTR 649
           L+++
Sbjct: 877 LISQ 880


>gi|28558778|gb|AAO45749.1| MRGH63 [Cucumis melo subsp. melo]
          Length = 943

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 243/716 (33%), Positives = 357/716 (49%), Gaps = 125/716 (17%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVFLSFRG+D R NF SHLN  L +  I  FID KL+RG EIS SL  AIE SK+SI++ 
Sbjct: 18  DVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEISSSLLEAIEESKVSIIVI 77

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------------- 117
           SE YASS WCLNELVKI+      GQ+V+P+FY VDPS+ G                   
Sbjct: 78  SESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGNQSGRFGEEFAKLEVRFSS 137

Query: 118 -----YCPSL-------GWMGIFDIPTSESVLIEGNVNDISKKLS-DLFPSDNKDQLVGV 164
                +  +L       GW  +      E+ LI+  V ++ K+L       D     VG+
Sbjct: 138 DKMEAWKEALITVSHMSGWPVLQR--DDEANLIQNIVQEVWKELDRATMQLDVAKYPVGI 195

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +  ++ +   ++S  T    VG++GIGG+GKTT+A A+Y+ I+  FEG  F+ NIR+ S 
Sbjct: 196 DIQVRNLLPHVMSNGT--TMVGLYGIGGMGKTTLAKALYNKIADDFEGCCFLPNIREASN 253

Query: 225 KVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           + GGL  +                      +   R RL   K+L++  D+   +Q+  L+
Sbjct: 254 QYGGLVQLQRELLREILVDDSIKVSNLPRGVTIIRNRLYSKKILLILDDVDTREQLQALV 313

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           G  D F  GS+VI TTR+ QLL  H   ++  V     L Y+++L LFS + F  +HP  
Sbjct: 314 GGHDWFGHGSKVIATTRNKQLLVTHGFDKMQSVV---GLDYDEALELFSWHCFRNSHPLN 370

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSE--------EEWESAVNKLKRMPHMDIQK 375
            +LELS   + Y  G+PLAL+VLGS+L  + +        +E+E      K     +IQ 
Sbjct: 371 DYLELSKRAVDYCKGLPLALEVLGSFLHSIDDPFNFKRILDEYE------KYYLDKEIQD 424

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTIS 434
            L++SYDGL+DE + IF   +C F   D   V   L+AC     + GI++L+  SL+TI 
Sbjct: 425 SLRISYDGLEDEVKEIFCYISCCFVREDINKVKMMLEACGCICLEKGITKLMNLSLLTIG 484

Query: 435 N-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----------- 482
             N++ MHD++Q+MG  I   E+ K   KR RL   +D   VL  N              
Sbjct: 485 RFNRVEMHDIIQQMGRTIHLSETSKS-HKRKRLLIKDDAMNVLKGNKEARAVKVIKFNFP 543

Query: 483 -PTGINLDS--------LKELYLGGCS-----------------NLKRFPEISC------ 510
            PT +++DS        L  L +G  +                 N  +FP  S       
Sbjct: 544 KPTELDIDSRAFEKVKNLVVLEVGNATSSKSTTLEYLPSSLRWMNWPQFPFSSLPPTYTM 603

Query: 511 -NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
            N+ +L L  ++I+       +  RL +++LT+ + L  +   L    +L+ L+L GC  
Sbjct: 604 ENLVELKLPYSSIKHFGQGYMSCERLKEINLTDSNFLVEIPD-LSTAINLKYLDLVGCEN 662

Query: 570 LEKLPEEIGNLESLEYLNLAE--KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           L K+ E IG+L  L  L+L+   K FE+ PS +K L  L  L ++NC+  +  P+ 
Sbjct: 663 LVKVHESIGSLNKLVALHLSSSVKGFEQFPSHLK-LKSLKFLSMKNCRIDEWCPQF 717



 Score = 42.4 bits (98), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 35/191 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAI-EELPSSIGNLSRLVD 537
            P+ + L SLK L +  C   +  P+ S    +IE L +  + +  +L  +IG L+ L  
Sbjct: 691 FPSHLKLKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLSIGYSIVTHQLSPTIGYLTSLKH 750

Query: 538 LDLTNCSGLKSVSS---RLCNLKSL-------------------------RRLNLSGC-- 567
           L L  C  L ++ S   RL NL SL                          +L L GC  
Sbjct: 751 LTLYYCKELTTLPSTIYRLSNLTSLIVLDSDLSTFPSLNHPSLPSSLFYLTKLRLVGCKI 810

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
             L+ L   +    SL+ L+L+E +F ++PS +     L  L   +C+ L+ + ++P G 
Sbjct: 811 TNLDFLETIVYVAPSLKELDLSENNFCRLPSCIINFKSLKYLYTMDCELLEEISKVPEGV 870

Query: 628 -SIHARHCTSL 637
               A  C SL
Sbjct: 871 ICTSAAGCKSL 881


>gi|9965103|gb|AAG09951.1| resistance protein LM6 [Glycine max]
          Length = 863

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 253/706 (35%), Positives = 368/706 (52%), Gaps = 105/706 (14%)

Query: 24  GKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGYAS 82
           G+D R  F  +L  ALC   I TFIDD+ L RG+EI P+LS+AI+ S+I+I + S+ YAS
Sbjct: 3   GQDTRQGFTGYLYKALCDRGIYTFIDDQELRRGDEIKPALSNAIQESRIAITVLSQNYAS 62

Query: 83  SRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG-------------- 123
           S +CL+ELV IL  K++ G +V+PVFY VDPS        Y  ++               
Sbjct: 63  SSFCLDELVTILHCKSQ-GLLVIPVFYKVDPSHVRHQKGSYGEAMAKHQKRFKANKEKLQ 121

Query: 124 -W-MGIFDIP-----------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKE 170
            W M +  +            + E   I   V +IS+K S        D  VG+ES + E
Sbjct: 122 KWRMALHQVADLSGYHFKDGDSYEYEFIGSIVEEISRKFSRA-SLHVADYPVGLESEVTE 180

Query: 171 IESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG-- 227
           +   L  GS +  + +GI G+GG+GKTT+A A+++ I+ HF+ S F+QN+R+ES K G  
Sbjct: 181 VMKLLDVGSHDVVHIIGIHGMGGLGKTTLALAVHNFIALHFDESCFLQNVREESNKHGLK 240

Query: 228 -----------GLANIHL-------NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
                      G  +I L       +  + RL R KVL++  D+   +Q+  ++GR D F
Sbjct: 241 HLQSILLSKLLGEKDITLTSWQEGASMIQHRLQRKKVLLILDDVDKRQQLKAIVGRPDWF 300

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
            PGSRVIITTRD  LLK H   R    +EVK L+ + +L L + NAF +      + ++ 
Sbjct: 301 GPGSRVIITTRDKHLLKYHEVERT---YEVKVLNQSAALQLLTWNAFKREKIDPSYEDVL 357

Query: 330 NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQ 389
           N V+ YA+G+PLAL+V+GS L   +  EWESA+   KR+P  +IQ++LKVS+D L +E++
Sbjct: 358 NRVVTYASGLPLALEVIGSNLFEKTVAEWESAMEHYKRIPSDEIQEILKVSFDALGEEQK 417

Query: 390 NIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEM 447
           N+FLD AC FKG +   V N L D      K  I  LV KSLV +S  + + MHD++Q+M
Sbjct: 418 NVFLDIACCFKGYEWTEVDNILRDLYGNCTKHHIGVLVEKSLVKVSCCDTVEMHDMIQDM 477

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVL--------------------NENTSLPTGIN 487
           G EI RQ S ++PGK  RL  P+DI QV                     NEN  +     
Sbjct: 478 GREIERQRSPEEPGKCKRLLLPKDIIQVFKIEIICLDFSISDKEETVEWNENAFM----K 533

Query: 488 LDSLKELYLGGCSNLK---RFPEISCNIEDLDLKETAIEELPSSIGNLS----RLVDLDL 540
           + +LK L +  C   K    FPE    +  L+        LPS+   ++    +L D  +
Sbjct: 534 MKNLKILIIRNCKFSKGPNYFPE---GLRVLEWHRYPSNCLPSNFDPINLVICKLPDSSI 590

Query: 541 TNCS----GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFE 594
           T+         S+ S L  L  L  LN   C  L K+P+  ++ NL+ L + N  E    
Sbjct: 591 TSFEFHGSSKASLKSSLQKLGHLTVLNFDRCEFLTKIPDVSDLPNLKELSF-NWCE-SLV 648

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLK 638
            +  S+  L+KL  L    C++L S P L   S  +++   C+SL+
Sbjct: 649 AVDDSIGFLNKLKTLSAYGCRKLTSFPPLNLTSLETLNLGGCSSLE 694



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 35/193 (18%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  +NL SL+ L LGGCS+L+ FPEI     NI  L L +  I+ELP S  NL  L+
Sbjct: 672 TSFPP-LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLIGLL 730

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLS-GCLKLEKLPEE------IGNLESLE----- 584
            L L +C G+  +   L  +  L    ++  C + + +  E      +G++ S E     
Sbjct: 731 FLWLDSC-GIVQLRCSLATMPKLCEFCITDSCNRWQWVESEEGEEKVVGSILSFEATDCN 789

Query: 585 -----------------YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG- 626
                            YLNL   +F  +P   K+L  L+ L + +CK LQ +  LP   
Sbjct: 790 LCDDFFFIGSKRFAHVGYLNLPGNNFTILPEFFKELQFLTTLVVHDCKHLQEIRGLPPNL 849

Query: 627 SSIHARHCTSLKT 639
               AR+C SL +
Sbjct: 850 KHFDARNCASLTS 862



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  L  L    C  L + P++S   N+++L      ++  +  SIG L++L  L    C 
Sbjct: 610 LGHLTVLNFDRCEFLTKIPDVSDLPNLKELSFNWCESLVAVDDSIGFLNKLKTLSAYGCR 669

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L S      NL SL  LNL GC  LE  PE +G ++++  L L +   +++P S + L 
Sbjct: 670 KLTSFPP--LNLTSLETLNLGGCSSLEYFPEILGEMKNITVLALHDLPIKELPFSFQNLI 727

Query: 605 KLSDLRLQNCKRLQ---SLPELP 624
            L  L L +C  +Q   SL  +P
Sbjct: 728 GLLFLWLDSCGIVQLRCSLATMP 750


>gi|358348487|ref|XP_003638277.1| Cellulose synthase, partial [Medicago truncatula]
 gi|355504212|gb|AES85415.1| Cellulose synthase, partial [Medicago truncatula]
          Length = 1681

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 234/703 (33%), Positives = 358/703 (50%), Gaps = 111/703 (15%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P   +DVF++FR KD   +FVSHL A L + +I+    D+L+ G  +   L  AI+ S++
Sbjct: 118 PEWIYDVFINFRSKDTGKSFVSHLYAVLKKARIKHIDIDQLHDGVLLESELFEAIKMSRM 177

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL--------- 122
           SI++FS+ Y  S WCL+EL +++E +  +GQ+VVP+FY V PSD  Y             
Sbjct: 178 SILVFSKNYTESSWCLDELQRVMECRRTHGQMVVPLFYDVTPSDVRYQKGHFGKKLRAAA 237

Query: 123 --------------GW---------MGIFDIPT--SESVLIEGNVNDISKKLSDL----- 152
                         GW         +  +D     +E+ L+   + D+ +KL        
Sbjct: 238 KRISGKGMREHVVSGWRVALSEAANISGWDASNFRNEAELLRKIIEDVLRKLKGSRRLLS 297

Query: 153 ---FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
              FP       VG+++ ++E    + + S    ++GIWG+GG GKTT A AIY+ I   
Sbjct: 298 IPEFP-------VGLDTHVQEAIQIIENQSNNVCSMGIWGMGGSGKTTTAKAIYNQIYHT 350

Query: 210 FEGSYFMQNIRDESEKVGGLANIHLN---------FERR-------------RLSRMKVL 247
           F   +F+ NIR   E+ G    IHL          F  +             RLS +K L
Sbjct: 351 FLYHHFIANIRQVCER-GDEGIIHLQEQLLANVLGFNEKIYNTASGITTIEDRLSGIKAL 409

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           IV  D++ L+Q + L G    F  GS +I+T+RD ++L   R   V +   +KE+    S
Sbjct: 410 IVLDDVSTLEQAEALCGNSKWFGSGSVLIVTSRDTRIL---RLLEVKYRLTMKEMVEGKS 466

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LF  +AF Q  P   F ELS  V+ Y  G+PLAL+++GS L   +++EW S ++K ++
Sbjct: 467 LELFCWHAFRQPSPIEDFSELSRSVVAYCGGLPLALEIIGSMLHYRTKQEWRSVLSKFEK 526

Query: 368 MPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
           +PH  +Q++LK+SYDGL DD  + +FLD  CFF G D+  V   L+ C   A IGI+ L+
Sbjct: 527 IPHYLMQQILKISYDGLMDDMVKAVFLDICCFFIGEDKAYVTEILNGCGLCADIGIAVLI 586

Query: 427 GKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
            +SL+ +  NN + MH L+++MG EIVR+ S K+PG+RSRLW  +DI+ VL ENT     
Sbjct: 587 ERSLLKVEDNNTLGMHKLIRDMGREIVRESSAKEPGERSRLWFHDDIHDVLTENTGRKNV 646

Query: 485 -GINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR--------- 534
            G+ L S +   +  C + + F      ++DL L +    +L    G LS+         
Sbjct: 647 EGLVLKSQRTGRV--CFSTESFK----RMKDLRLLKLDRVDLTGDYGYLSKELRWVHWKG 700

Query: 535 --------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
                         LV  +LT+ S +K V +    L +L+ LNLS  + LE  P +   L
Sbjct: 701 FTFNYIPDDFHQGNLVVFELTH-SNIKHVWNETKVLVNLKILNLSHSIYLESSP-DFSKL 758

Query: 581 ESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            +LE L + +     +I  S+  L+ +  + L+NC  L   P+
Sbjct: 759 PNLEKLIMNDCPCLSEIHPSIGDLNNIHLINLKNCISLSKFPK 801



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET-AIEELPSSI 529
           +I  V NE   L     L+    +YL    +  + P    N+E L + +   + E+  SI
Sbjct: 724 NIKHVWNETKVLVNLKILNLSHSIYLESSPDFSKLP----NLEKLIMNDCPCLSEIHPSI 779

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
           G+L+ +  ++L NC  L      +  LKSL+ L L GC K+  L ++I  +ESL  L
Sbjct: 780 GDLNNIHLINLKNCISLSKFPKNIFKLKSLKTLILLGCTKIGSLEKDIVQMESLTEL 836


>gi|357500105|ref|XP_003620341.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495356|gb|AES76559.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1047

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 244/734 (33%), Positives = 372/734 (50%), Gaps = 132/734 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D RH F  +L  AL  + I+TFIDD  L RG+EI+PSL  AI+ S+I I 
Sbjct: 18  YQVFLSFRGIDTRHGFTGNLYKALTDKGIKTFIDDNDLQRGDEITPSLRKAIDESRIFIP 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FS  YASS +CL+ELV I+      G++V+PVF+ V+P++       Y  +L       
Sbjct: 78  VFSIFYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVEPTNVRHLKGSYGEALAEHEKRF 137

Query: 124 ------------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                       W           G       E   I   V +IS K+S   P    +  
Sbjct: 138 QNDKNNMERLHQWKLALTQAANLSGYHSSHGYEYKFIGEIVKNISNKISHQ-PLHVANYP 196

Query: 162 VGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           VG++S ++ ++S L  GS    + VG++G GG+GK+T+  AIY+ I+  FE S F++N+R
Sbjct: 197 VGLQSRVQHVKSLLDEGSDHGAHMVGLYGTGGLGKSTLGKAIYNFIADEFECSCFLENVR 256

Query: 221 DESE--------------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           + S                     K+GG++   ++  + RL   K+L++  D+ D++Q+ 
Sbjct: 257 ENSASNKLKHLQEELLLKTLQLEIKLGGVSE-GISHIKERLHSKKILLILDDVDDMEQLQ 315

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G  D F  GSRVIITTRD  LL++H G    H  EV+ L   ++L L    AF  N 
Sbjct: 316 ALAGEPDWFGLGSRVIITTRDKHLLRSH-GIESTH--EVEGLYGTEALELLRWMAFKNNK 372

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
             + + ++ N  + YA+G+PL L+++GS L G + EEW+  ++  +++P+  I ++LKVS
Sbjct: 373 VPSSYEDVLNRAVSYASGLPLVLEIVGSNLFGKTIEEWKGTLDGYEKIPNKKIHEILKVS 432

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG--ISRLVGKSLVTISN--- 435
           YD L++E+Q++FLD AC FKG   +    ++    +  +I   +  L  KSLV I++   
Sbjct: 433 YDALEEEQQSVFLDIACCFKGCG-WKEFEYILRAHYGHRITHHLVVLAEKSLVKITHPHY 491

Query: 436 ---NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLK 492
              N++T+HDL++EMG E+VRQES K+PG+RSRLW  +DI  VL ENT          ++
Sbjct: 492 GSINELTLHDLIKEMGKEVVRQESPKEPGERSRLWCEDDIVNVLKENTG------TSKIE 545

Query: 493 ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC---SGLKSV 549
            +Y+        FP           +E  I++   +   ++RL  L + N     GLK +
Sbjct: 546 MIYMN-------FPS----------EEFVIDKKGKAFKKMTRLKTLIIENVHFSKGLKYL 588

Query: 550 SSRLCNLKSLRRLNLSGCL-----------KLEKLPEEIGNLESLEYL----------NL 588
            S      SLR L L GCL           K + +  +I  L+  EYL          NL
Sbjct: 589 PS------SLRVLKLRGCLSESLISCSLSKKFQNM--KILTLDRCEYLTHIPDVSGLQNL 640

Query: 589 AEKDFE------KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
            +  FE       I +S+  L+KL  L    C +L+  P L   S   ++  +C SLK+ 
Sbjct: 641 EKFSFEYCENLITIHNSIGHLNKLERLSANGCSKLERFPPLGLASLNELNISYCESLKSF 700

Query: 641 SNSSTLLTRSSKHW 654
                 +T     W
Sbjct: 701 PKLLCKMTNMKMIW 714



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 20/153 (13%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SL EL +  C +LK FP++ C   N++ + L++T+I ELPSS  NL+ L  L L  
Sbjct: 681 LGLASLNELNISYCESLKSFPKLLCKMTNMKMIWLQKTSIRELPSSFQNLNELFLLTLWE 740

Query: 543 CSGLKS----------VSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEK 591
           C  L+           V S++ NL       L  C L  E LP  +    ++  L+L+  
Sbjct: 741 CGMLRFPKQNDQMYSIVFSKVTNLI------LHDCKLSDECLPIFLKWCVNVTSLDLSYN 794

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           +F+ IP  + +   L+ L L NCK L+ +  +P
Sbjct: 795 NFKLIPECLSECHLLNILILDNCKSLEEIRGIP 827



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 5/134 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
             ++K L L  C  L   P++S   N+E    +    +  + +SIG+L++L  L    CS
Sbjct: 614 FQNMKILTLDRCEYLTHIPDVSGLQNLEKFSFEYCENLITIHNSIGHLNKLERLSANGCS 673

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+        L SL  LN+S C  L+  P+ +  + +++ + L +    ++PSS + L+
Sbjct: 674 KLERFPP--LGLASLNELNISYCESLKSFPKLLCKMTNMKMIWLQKTSIRELPSSFQNLN 731

Query: 605 KLSDLRLQNCKRLQ 618
           +L  L L  C  L+
Sbjct: 732 ELFLLTLWECGMLR 745


>gi|227438287|gb|ACP30633.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 270/781 (34%), Positives = 379/781 (48%), Gaps = 151/781 (19%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPS 61
           ASSSS+       + DVFLSFRG D R+NF  HL   L  + I++FIDD+L RG++I+ +
Sbjct: 8   ASSSSA-------EFDVFLSFRGADTRNNFTGHLQDKLLGKGIDSFIDDRLRRGDDIT-A 59

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS 121
           L   IE SKI+IV+FSE YA+S WCL ELVKIL+ +++  Q+V+P+ Y +D S       
Sbjct: 60  LFDRIEQSKIAIVVFSENYANSVWCLRELVKILQCRDRNQQLVIPILYKIDKSKLKNVRK 119

Query: 122 LGWMGI-------FDIPTSESVLIEGN------------VNDIS----KKLSDLFPSDNK 158
             + G+       ++   S +V I G             VNDI+    KKL+DL P  N 
Sbjct: 120 TRFTGVTEDEIVSWEAAISTAVDISGYVVDRYSTSEAKLVNDIAFDTFKKLNDLAPIGNT 179

Query: 159 DQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
             LVG+ES +K +E  L     ++ + +GI G+GGIGKTT+A  +Y  +   F+G  F+ 
Sbjct: 180 G-LVGIESRLKTLEKLLSCHELDYVHVIGIIGMGGIGKTTLADCLYERMRGMFDGCCFLA 238

Query: 218 NIRDESE---------------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
           NIR+ S                      K G  A+ H  F  RRL   ++LIV  D+ D 
Sbjct: 239 NIRENSGRSGIESLQKELFSTLLDDRYLKTGAPASAHQRFH-RRLKSKRLLIVLDDVNDE 297

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           KQI  L+G    +  GSR+IITTRD +L+K       G  + + +L+  ++L LF  NAF
Sbjct: 298 KQIKYLMGHCKWYQGGSRIIITTRDSKLIK-------GQKYVLPKLNDREALKLFCLNAF 350

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
             + P   F  L+N+ + YA G PLAL+VLGS L+ M++  WE+ ++ LK   H DI +V
Sbjct: 351 AGSCPLKEFEGLTNMFLDYARGHPLALKVLGSDLRDMNKLFWEAKLDLLKSKSHGDIYEV 410

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           L+ SY+ L +++++IFLD ACFF+      V + L +        I  LV K L+T S+N
Sbjct: 411 LETSYEELSNDQKDIFLDIACFFRSEKVDYVTSLLSSRGVDVSSLIQDLVDKCLITRSDN 470

Query: 437 KITMHDLLQEMGGEI-----------VRQESIKDPGKRS--RLWHPEDIYQVLNE--NTS 481
           +I MHD+LQ MG EI           VR  S   P      RLW  EDI  +L +   T 
Sbjct: 471 RIEMHDMLQTMGKEISFKPEPIGIRDVRWLSKHRPQHHWHLRLWDSEDICDMLTKGLGTE 530

Query: 482 LPTGINLDSLK--------------------ELYLGGCSN-------------------- 501
              GI LD+ K                    ++Y   CS                     
Sbjct: 531 KIRGIFLDTSKRGKLRLRPDAFKGMYNLKYLKIYDSRCSRGCEAVFKLHFKGLDFLPDEL 590

Query: 502 ---------LKRFP--EISCNIEDLDLKETAIEEL--PSSIGNLSRLVDLDLTNCSGLKS 548
                    L+RFP      N+ DL L  + +EE+     +  + + VDL         S
Sbjct: 591 AYLHWHGFPLQRFPLDFDPKNLVDLKLPHSELEEIWGDDKVAGMLKWVDL---------S 641

Query: 549 VSSRLCNL------KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMK 601
            SS LC L       +L RLNL GC  L+ LP  I  LE L YLNL E    + +P   K
Sbjct: 642 HSSNLCRLLGLAKAHNLERLNLEGCTSLKMLPSSINCLEKLVYLNLRECTSLKSLPEETK 701

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSN 661
             S L  L L  C  L+  P +     +     T++K+L +S      +S      N  N
Sbjct: 702 SQS-LQTLILSGCSSLKKFPLISESIEVLLLDGTAIKSLPDS----IETSSKLASLNLKN 756

Query: 662 C 662
           C
Sbjct: 757 C 757



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 472 IYQVLNENTSL---PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
           +Y  L E TSL   P      SL+ L L GCS+LK+FP IS +IE L L  TAI+ LP S
Sbjct: 683 VYLNLRECTSLKSLPEETKSQSLQTLILSGCSSLKKFPLISESIEVLLLDGTAIKSLPDS 742

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
           I   S+L  L+L NC  LK +SS L  LK L+ L LSGC +LE  PE   ++ESLE L L
Sbjct: 743 IETSSKLASLNLKNCKRLKHLSSNLYKLKCLQELILSGCSQLEVFPEIKEDMESLEILLL 802

Query: 589 AEKDFEKIPSSMKQLSKLSDLRL--QNCK 615
            +    ++P +MK LS +    L   NC+
Sbjct: 803 DDTSITEMP-NMKHLSNIKTFSLCGTNCE 830



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 99/188 (52%), Gaps = 19/188 (10%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDL--TN 542
           L  L+EL L GCS L+ FPEI  ++E L+   L +T+I E+P+ + +LS +    L  TN
Sbjct: 770 LKCLQELILSGCSQLEVFPEIKEDMESLEILLLDDTSITEMPN-MKHLSNIKTFSLCGTN 828

Query: 543 CSGLKSVSSRLCNLKS------LRRLNLSGCLKLEKLPEEIGN-LESLEYLNLAEKDFEK 595
           C     VS R+  L        L  L LS C  L ++P   GN L SL+ L L+    E 
Sbjct: 829 CE----VSVRVLFLSPPLGCSRLTDLYLSRC-SLYRIPNISGNGLSSLQSLCLSGNSIEN 883

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHW 654
           +P S  QL  L    L+ CK L+SLP LP     + A  C SL+TL+N  T LT   +  
Sbjct: 884 LPESFNQLHNLKWFDLKYCKNLKSLPVLPQNLQYLDAHECESLETLANPLTPLTVRERIH 943

Query: 655 DIFNFSNC 662
            +F FSNC
Sbjct: 944 SMFMFSNC 951



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 12/159 (7%)

Query: 491 LKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           LK + L   SNL R   ++   N+E L+L+  T+++ LPSSI  L +LV L+L  C+ LK
Sbjct: 635 LKWVDLSHSSNLCRLLGLAKAHNLERLNLEGCTSLKMLPSSINCLEKLVYLNLRECTSLK 694

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           S+       +SL+ L LSGC  L+K P      ES+E L L     + +P S++  SKL+
Sbjct: 695 SLPEET-KSQSLQTLILSGCSSLKKFPLIS---ESIEVLLLDGTAIKSLPDSIETSSKLA 750

Query: 608 DLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTL 646
            L L+NCKRL+ L      S+++   C     LS  S L
Sbjct: 751 SLNLKNCKRLKHL-----SSNLYKLKCLQELILSGCSQL 784


>gi|356559997|ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1420

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 243/716 (33%), Positives = 368/716 (51%), Gaps = 102/716 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D RH F  HL  AL  + I TFIDD KL RG +I+ +L  AI+ S+++I 
Sbjct: 16  YDVFLSFRGEDTRHAFTGHLYKALHDKGIHTFIDDEKLQRGEQITRALMEAIQDSRVAIT 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           + S+ YASS +CL+EL  IL    +   +V+PVFY VDPSD       Y  +L       
Sbjct: 76  VLSQNYASSSFCLDELATILHCHQRKRLLVIPVFYKVDPSDVRHQKGSYAEALEKLETRF 135

Query: 123 --------GW-MGIFDIPT-----------SESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                    W M +  +              E   IE  V  +S++++        D  V
Sbjct: 136 QHDPEKLQKWKMALKQVADLSGYHFKEGDGYEFKFIEKIVERVSREINPR-TLHVADYPV 194

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN--ISSHFEGSYFMQNI 219
           G+ES + ++   L +GS +  + +GI G+GG+GK+T+A A+Y+   I+  F+G  F+ N+
Sbjct: 195 GLESRVLDVRRLLDAGSDDGVHMIGIHGMGGLGKSTLARAVYNELIIAEKFDGFCFLANV 254

Query: 220 RDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQ 258
           R++S+K  GL ++                      ++  + RL   KVL++  D+    Q
Sbjct: 255 REKSDKKDGLEHLQRILLSEILGEKNISLTSTQQGISIIQSRLKGKKVLLILDDVNTHGQ 314

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +   IGR D F PGS++IITTRD QLL  H    V   +E+KEL+  D+L L + NAF +
Sbjct: 315 LQA-IGRRDWFGPGSKIIITTRDEQLLAYHE---VNETYEMKELNQKDALQLLTWNAFKK 370

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
                 ++E+ + V+ YA+G+PLAL+V+GS+L G S E WESA+ + KR+P  +I  VL 
Sbjct: 371 EKADPTYVEVLHRVVAYASGLPLALEVIGSHLVGKSIEAWESAIKQYKRIPKKEILDVLT 430

Query: 379 VSYDGLDDEEQNIFLDTACFFKG----NDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
           VS+D L++EEQ +FLD AC  KG      ++++    D C    K  I  LV KSL+ +S
Sbjct: 431 VSFDALEEEEQKVFLDIACCLKGWTLTEVEHILPGLYDDC---MKHNIGVLVEKSLIKVS 487

Query: 435 --NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD- 489
             +  + MHDL+Q+MG  I +Q S K+PGKR RLW  +DI QVL++N  TS    I+LD 
Sbjct: 488 WGDGVVNMHDLIQDMGRRIDQQRSSKEPGKRRRLWLTKDIIQVLDDNSGTSEIQMISLDL 547

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD--LTNC--SG 545
           SL E       N   F +I  N++ L ++     + P+      R+++     +NC  S 
Sbjct: 548 SLSEKETTIDWNGNAFRKIK-NLKILFIRNGKFSKGPNYFPESLRVLEWHGYPSNCLPSN 606

Query: 546 LKSVSSRLCNL-----------------KSLRRLNLSGCLKLEKLPE--EIGNLESLEYL 586
                  +C L                 + L+ L    C  L ++P+   + NLE L + 
Sbjct: 607 FPPKELVICKLSQSYITSFGFHGSRKKFRKLKVLKFDYCKILTEIPDVSVLVNLEELSFN 666

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
                +   +  S+  L+KL  L    C +L + P L   S   +    C+SL+  
Sbjct: 667 RCG--NLITVHHSIGFLNKLKILSAYGCSKLTTFPPLNLTSLEGLQLSACSSLENF 720



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 38/192 (19%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET----AIEELPSSIGNLSRL 535
           T+ P  +NL SL+ L L  CS+L+ FPEI   +++L + +      ++ELP S  NL  L
Sbjct: 696 TTFPP-LNLTSLEGLQLSACSSLENFPEILGEMKNLLMLQLFGLLGVKELPVSFQNLVGL 754

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGN----------- 579
             L L +C      S+ +  +  L  L    C     +K E+  E++G+           
Sbjct: 755 QSLILQDCENFLLPSNIIAMMPKLSSLLAESCKGLQWVKSEEGEEKVGSIVCSNVDDSSF 814

Query: 580 ----------------LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                           L+ ++ L+L + +F  +P  +K+L  L+ L +  C RLQ +  +
Sbjct: 815 DGCNLYDDFFSTGFMQLDHVKTLSLRDNNFTFLPECLKELQFLTRLDVSGCLRLQEIRGV 874

Query: 624 PCG-SSIHARHC 634
           P       AR C
Sbjct: 875 PPNLKEFMAREC 886


>gi|357469545|ref|XP_003605057.1| TMV resistance protein N [Medicago truncatula]
 gi|355506112|gb|AES87254.1| TMV resistance protein N [Medicago truncatula]
          Length = 1626

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 246/745 (33%), Positives = 379/745 (50%), Gaps = 116/745 (15%)

Query: 7    SINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSA 65
            S++M     +DVFLSFRG+D R  F+SHL  +L    +  F DD  + RG++IS +L  A
Sbjct: 510  SMDMAATKMYDVFLSFRGEDCRAKFISHLYISLQNSGLYVFKDDDGIQRGDQISVALIQA 569

Query: 66   IEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY------- 118
            +  SKISIV+ S+ +A+S+WC+ EL +I+E     G ++VPVFY VDPS+  +       
Sbjct: 570  VGQSKISIVVLSKNFANSKWCMTELERIVEISRTKGMVLVPVFYEVDPSEVRHQTGEFGK 629

Query: 119  ---C----------PSLGW----------MGIFDIPTS-ESVLIEGNVNDISKKL--SDL 152
               C              W           G+  + +S ES  I+  V+ ++  L  ++L
Sbjct: 630  AFECLLSTKSVDEYTKRNWKAALHEVGSIAGVVILKSSDESEDIKKIVDLVTHLLDKTEL 689

Query: 153  FPSDNKDQLVGVESIIKEIESQLLS--GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
            F +D+    VG+ES ++++  QLLS   S +   +GIWG+GGIGKTT+A A+Y+ I   F
Sbjct: 690  FVADHP---VGLESRVRDV-IQLLSRQKSKDPQLLGIWGMGGIGKTTLAKAVYNKIRHDF 745

Query: 211  EGSYFMQNIRD----ESEKVGGLANIHLNFER-----------------RRLSRMKVLIV 249
            +   F+ N+RD    + +KV     +  +  +                  RL   K+ +V
Sbjct: 746  DAKSFLFNVRDVWKVDDDKVSLQQRLLFDICKTTKIKIDSVESGKKILQERLCSKKIFLV 805

Query: 250  FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
              D+  L Q++ L G    F  GSR++ITTRD  LL       V HV+ +KE+  ++SL 
Sbjct: 806  IDDVNKLDQLNALCGDRKWFGKGSRILITTRDDDLLSR---LEVDHVYRMKEMDSSESLE 862

Query: 310  LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS-EEEWESAVNKLKRM 368
            LF+ +AF Q+    GF  +S  V+KY+ G+PLALQV+GS+L     + EW+  + KLK +
Sbjct: 863  LFNWHAFKQSTSREGFTNISRDVVKYSGGLPLALQVIGSFLSTKKIKAEWKDVLEKLKLI 922

Query: 369  PHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
            P+ ++ + L++S+DGL DD+ ++IFLD A FF G D+  V   L  C   + IGIS LV 
Sbjct: 923  PNNEVLEKLRISFDGLSDDDVKDIFLDIAFFFIGMDREDVTKILQDCGHFSVIGISVLVQ 982

Query: 428  KSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT-G 485
            +SLVT+   NKI MHDLL++MG EIVR+ S     + SRLWH ED++++  + +SL   G
Sbjct: 983  QSLVTVDRKNKIGMHDLLRDMGREIVRKISKDADKEPSRLWHYEDVHKLPIDTSSLAVKG 1042

Query: 486  INL-------------------DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP 526
            ++L                   D L+ L L G      +  +S ++  L      ++ +P
Sbjct: 1043 LSLKMSRMDSTTYLETKAFEKMDKLRFLQLVGIQLNGDYKYLSRHLRWLSWHGFPLKYIP 1102

Query: 527  SSI------------GNLSR-------LVDLDLTNCSGLKSV--SSRLCNLKSLRRLNLS 565
            +               NL R       LV L + N S   ++  +     L +L +L L 
Sbjct: 1103 ADFHQDTLVAVVLKYSNLERVWRKSQFLVKLKILNLSHSHNLRHTPDFSKLPNLEKLILK 1162

Query: 566  GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             C  L  +   IG+L+ +  +NL +     ++P S+ +L  L  L L  C ++  L E  
Sbjct: 1163 DCPSLSSVSSNIGHLKKILLINLKDCTGLRELPRSIYKLDSLKTLILSGCTKIDKLEE-- 1220

Query: 625  CGSSIHARHCTSLKTLSNSSTLLTR 649
                       SL TL    T +TR
Sbjct: 1221 -----DIEQMKSLTTLVADDTAITR 1240



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 175/514 (34%), Positives = 263/514 (51%), Gaps = 80/514 (15%)

Query: 11  IPHPKH----DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSA 65
           +PHP H    DVFLS+  K +  +F   L++AL +     +I++  L  G + +   S+A
Sbjct: 11  VPHPHHLWMFDVFLSYHDKYIGKSFALDLSSALTQAGYAVYINNHDLTSGEQRN---SAA 67

Query: 66  IEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWM 125
           I+  + SI+IFS  +  S W L E+ KILE +    Q+ VPVFY VDPSD      L   
Sbjct: 68  IKACRTSIIIFSSKFDGSTWFLEEMEKILECRRTIKQVFVPVFYDVDPSDV-----LKQK 122

Query: 126 GIFD----------IPTSES------VLIEG----------------NVNDISKKLSDLF 153
           G+F           I T +S       L E                  +NDI +    L 
Sbjct: 123 GVFGEAFVDCIARGILTEDSSIRYRDALFEAANISGFRMMDTRSQYNEINDIVQGFCHLI 182

Query: 154 PSDN----KDQLVGVESIIKEIESQLLSGSTEFNT--VGIWGIGGIGKTTIASAIYSNIS 207
                    +  VGVE+ +K++  QLL+     NT  VGIWG+ G+GKT IA A Y+ +S
Sbjct: 183 EDQKSLFIAEHPVGVEARVKDV-IQLLNSEQAENTMIVGIWGMAGVGKTIIAKATYNQMS 241

Query: 208 SHFEGSYFMQNIRDESEKVG--GLAN--------------IHLN-------FERRRLSRM 244
             F+    ++N+ +E+ K G  GL +              IH++         +R L   
Sbjct: 242 FTFDCKSILKNV-NETCKSGDDGLVSFQRQLLLDICKTTKIHIDTVESGKKILQRSLCHK 300

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KV +V   +  L+Q++ L G  D F  GSR++ITT D  +L+N    ++ HV+ +K +  
Sbjct: 301 KVFLVLDGVNKLEQLNALCGDRDWFGHGSRIVITTSDKHILRN---LQLDHVYRMKYMDN 357

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
            +SL LFS +AF    P   + +L   V++Y  G+P+AL++LGSYL   S +EW+ A+ K
Sbjct: 358 TESLKLFSWHAFRTPSPKESYADLCRDVVEYCGGLPVALEILGSYLFDRSVQEWKIALQK 417

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
            K +    I+K L+ + D LD + Q++FL  A  F G  +  V+  L+      +I IS 
Sbjct: 418 FKTILPYQIEKKLRKNLDVLDHDNQDVFLKIATLFIGMHKDDVIQTLNYSGHFPEIAISI 477

Query: 425 LVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESI 457
           L  KSL+TI  NN+I MH LL+ MG EI+RQ+S+
Sbjct: 478 LEDKSLLTIDGNNRIGMHTLLRAMGREIIRQQSM 511



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 3/113 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
            L  LK L L    NL+  P+ S   N+E L LK+  ++  + S+IG+L +++ ++L +C+
Sbjct: 1130 LVKLKILNLSHSHNLRHTPDFSKLPNLEKLILKDCPSLSSVSSNIGHLKKILLINLKDCT 1189

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            GL+ +   +  L SL+ L LSGC K++KL E+I  ++SL  L   +    ++P
Sbjct: 1190 GLRELPRSIYKLDSLKTLILSGCTKIDKLEEDIEQMKSLTTLVADDTAITRVP 1242


>gi|359493293|ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score =  314 bits (805), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 251/723 (34%), Positives = 366/723 (50%), Gaps = 110/723 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREK-IETFIDDK-LNRGNEI 58
           MA ++ S +       DVFLSFRG+D R  F  HL +ALC++K I TF D++ L+RG EI
Sbjct: 1   MAPTTRSSDFSLGWSWDVFLSFRGEDTRFTFTDHLYSALCQQKGIRTFRDNEGLHRGEEI 60

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-G 117
             SL  AIE S++ IV+FS+ YA S+WCL+EL KI+E K + GQIVVPVFY VDP D   
Sbjct: 61  GSSLLKAIEESRMCIVVFSKTYAHSKWCLDELAKIMECKTQKGQIVVPVFYHVDPCDVRN 120

Query: 118 YCPSLGWMGIFD----IPT----------SESVLIEG-NVND------ISKKLSDLFPSD 156
              S G    FD    +P           +E+  + G +V D      I + + D+   +
Sbjct: 121 QTRSFG--EAFDKYQKVPEDKVMRWKAALTEAANLSGYHVQDGYESQAIQRIVQDILSRN 178

Query: 157 NK-----DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            K     D+L+G+E  +KE+ S +   S +   +GI GI GIGKTT+A  +Y+ I   F+
Sbjct: 179 LKLLHVGDKLIGMERRLKEMASLIHIDSNDVRMIGISGIDGIGKTTLAKVVYNTIVHQFD 238

Query: 212 GSYFMQNI---------------RD-ESEKVGGLA-NIHLNFE-RRRLSRMKVLIVFYDL 253
           G+ F+ NI               RD   E +  ++ N   ++E RR     KVL+VF D+
Sbjct: 239 GASFLLNISSQQLSLLQLQKQLLRDILGEDIPTISDNSEGSYEIRRMFMSKKVLVVFDDV 298

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
               Q++ LI     F PGSR+I+T+ +  LL    G      +E KEL+  ++  LFS 
Sbjct: 299 NTYFQLESLIQNRSTFGPGSRIIVTSGNKNLLAGLGGD---AFYEAKELNCKEATQLFSL 355

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AF  N P  GF+ LS  ++ Y  G+P+AL+VLGS L G  + EW+S + +L++ P+M I
Sbjct: 356 HAFHMNSPQKGFIGLSRCIVDYCKGLPIALEVLGSLLFGKKKFEWKSVLQRLEKRPNMQI 415

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           Q VL   +  LDD  +++FLD ACFFKG D   V   L+  R   ++    L  +SL++I
Sbjct: 416 QNVLMRCFQTLDDSMKDVFLDVACFFKGEDLDFVERILEYGRLGTRV----LNDRSLISI 471

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------------S 481
            + K+ MHDL+Q+   EIVRQ+   +PGK SRLW PED++ VL +NT            S
Sbjct: 472 FDKKLLMHDLMQKACWEIVRQQDHNEPGKWSRLWDPEDVHHVLTKNTGTERIEGIFLNMS 531

Query: 482 LPTGINL--DSLKEL----------------YLGGCSNLKR-FPEISCNIEDLDLKETAI 522
           L   ++L  D+ K++                 +    +L R F   S  +  L      +
Sbjct: 532 LSNEMHLTSDAFKKMTRLRLLRVYQNAENNSIVSNTVHLPRDFKFPSHELRYLHWDGWTL 591

Query: 523 EELPSS-----IGNLS-----------------RLVDLDLTNCSGLKSVSSRLCNLKSLR 560
           E LPS+     +G LS                 +LV +DL N   L    + L     + 
Sbjct: 592 ESLPSNFDGEKLGELSLRHSSLKYLWKRRKRLPKLVVIDLGNSQHLLECPN-LSFAPRVE 650

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           RL L GC  L ++   +  L+ L  LN+          S+  L  L  L L  C ++   
Sbjct: 651 RLILDGCTSLPEVHPSVTKLKRLTILNVKNCKMLHYFPSITGLESLEVLNLSGCSKIDKF 710

Query: 621 PEL 623
           PE+
Sbjct: 711 PEI 713



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEIS-C--NIEDLDLKETAIEELPSSIGNLSRLVDL 538
            P+   L+SL+ L L GCS + +FPEI  C  N+ +L+L+ TAI ELP S+  L RLV L
Sbjct: 687 FPSITGLESLEVLNLSGCSKIDKFPEIQGCMENLLELNLEGTAIVELPPSVVFLPRLVLL 746

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           D+ NC  L  + S + +LKSL  L LSGC  LE  PE + ++E L+ L L     +++  
Sbjct: 747 DMKNCKNLMILPSNIYSLKSLGTLVLSGCSGLEIFPEIMEDMECLQELLLDGTSIKELSP 806

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPC 625
           S+  L  L  L ++ CK L+SLP   C
Sbjct: 807 SIVHLKGLQLLNMRKCKNLRSLPNSIC 833



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 4/138 (2%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           LP+ I +L SL  L L GCS L+ FPEI  ++E   +L L  T+I+EL  SI +L  L  
Sbjct: 757 LPSNIYSLKSLGTLVLSGCSGLEIFPEIMEDMECLQELLLDGTSIKELSPSIVHLKGLQL 816

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L++  C  L+S+ + +C+L+SL  L +SGC KL KLPE++G L+ L  L        + P
Sbjct: 817 LNMRKCKNLRSLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPP 876

Query: 598 SSMKQLSKLSDLRLQNCK 615
            S+  L  L +L  + CK
Sbjct: 877 LSLFHLRNLKELSFRRCK 894



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 28/189 (14%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLP  I +L SL+ L + GCS L + PE    ++    L    TAI + P S+ +L  L 
Sbjct: 827  SLPNSICSLRSLETLIVSGCSKLSKLPEDLGRLQFLMKLQADGTAITQPPLSLFHLRNLK 886

Query: 537  DLDLTNCSGLKSVS----------------------SRLCNLKSLRRLNLSGC-LKLEKL 573
            +L    C G  S S                        L  L SL+ L+LSGC L    +
Sbjct: 887  ELSFRRCKGSTSNSWISSLLFRLLHRENSDGTGLQLPYLSGLYSLKYLDLSGCNLTDRSI 946

Query: 574  PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-IHAR 632
             + +G+L  LE LNL+  +   +P  + +LS L  + +  CK LQ + +LP     + A 
Sbjct: 947  NDNLGHLRFLEELNLSRNNLVTVPEEVNRLSHLRVISVNQCKSLQEISKLPPSIKLLDAG 1006

Query: 633  HCTSLKTLS 641
             C SL++LS
Sbjct: 1007 DCISLESLS 1015



 Score = 38.9 bits (89), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 28/189 (14%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDL------DLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           ++ L L GC++L   PE+  ++  L      ++K   +     SI  L  L  L+L+ CS
Sbjct: 649 VERLILDGCTSL---PEVHPSVTKLKRLTILNVKNCKMLHYFPSITGLESLEVLNLSGCS 705

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
            +         +++L  LNL G   +E LP  +  L  L  L++   K+   +PS++  L
Sbjct: 706 KIDKFPEIQGCMENLLELNLEGTAIVE-LPPSVVFLPRLVLLDMKNCKNLMILPSNIYSL 764

Query: 604 SKLSDLRLQNCKRLQSLPELPCGSSIHARHC--------TSLKTLSNSSTLLTRSSKHWD 655
             L  L L  C  L+  PE+     +    C        TS+K LS S   L    K   
Sbjct: 765 KSLGTLVLSGCSGLEIFPEI-----MEDMECLQELLLDGTSIKELSPSIVHL----KGLQ 815

Query: 656 IFNFSNCSN 664
           + N   C N
Sbjct: 816 LLNMRKCKN 824


>gi|356515118|ref|XP_003526248.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1010

 Score =  314 bits (805), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 238/683 (34%), Positives = 351/683 (51%), Gaps = 82/683 (12%)

Query: 13  HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKI 71
           +  +DVF+SFRGKD R+NF  HL  A  R+KI TF DD +L +G  I  +L  AIEGS+I
Sbjct: 19  YSSYDVFVSFRGKDTRNNFTDHLFGAFHRKKIRTFRDDTRLKKGERILSNLMQAIEGSQI 78

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--------------- 116
            +++FS+ YA S WCL EL KIL+     G+ V+P+FY VDPS+                
Sbjct: 79  FVIVFSKNYAFSSWCLKELAKILDCVRVSGKHVLPIFYDVDPSEVRNQTGDYEKAFAKHE 138

Query: 117 ---------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                              +L    + +   S+   IE  V +I  KL   F S   D L
Sbjct: 139 DREKMEEVKRWREALTQVANLAGWDMRNKHESQYAEIEKIVQEIISKLGHNFSSLPND-L 197

Query: 162 VGVES-IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           VG+ES + +  +  LL  + +   VGI G+GGIGKTT+A+ +Y  IS  F+   F+ N+ 
Sbjct: 198 VGMESPVEELEKLLLLDLTDDVRIVGICGMGGIGKTTLATVLYDRISHQFDAHCFIDNVS 257

Query: 221 DESEKVGGLA-----------------NIH--LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                 G +                  N++   N  + RL  +K +IV  ++ +++Q++ 
Sbjct: 258 KTYRHCGQIGVLKQLLHQTLNEDLQICNLYHAANLMQSRLRYVKSIIVLDNVNEVEQLEK 317

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+   +    GSR+II +RD  +LK      V  V++V+ L+  +SL LF + AF     
Sbjct: 318 LVLNREWLGAGSRIIIISRDKHVLKK---CGVTVVYKVQLLNGANSLKLFCKKAFDSVDI 374

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              + EL   V+KYAN +PLA++VLGS L G S   W S +++LK  P+ DI  VL++SY
Sbjct: 375 TGDYEELKYEVLKYANDLPLAIKVLGSVLSGRSVSYWRSYLDRLKENPNKDILDVLRISY 434

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           D L D E+ IFLD ACFF GN++  V   LD C F ++IGI  LV KSL+  S+  I MH
Sbjct: 435 DELQDLEKEIFLDIACFFCGNEELYVKKVLDCCGFHSEIGIRALVDKSLIDNSSGFIEMH 494

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-TSLPTGINLDSLKELYLGGCS 500
           +LL+ +G  IV+  + K+PGK SR+W  ED Y +     T+    I LD   E+ +    
Sbjct: 495 NLLKVLGRTIVKGNAPKEPGKWSRVWLHEDFYNMSKATETTNNEAIVLDREMEILMADAE 554

Query: 501 NLKRFPE--------------------ISCNIEDLDLKETAIEELPSSIG-NLSRLVDLD 539
            L +                       +S  ++ L+        LPSS   NL  LV+L 
Sbjct: 555 ALSKMSNLRLLIFRDVKFMGILNSVNCLSNKLQFLEWYNYPFSYLPSSFQPNL--LVELI 612

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPS 598
           L + S +K +   + +L +LR L+LS    L + P + G + +LE++ L    +  +I  
Sbjct: 613 LQH-SNIKQLWKGIKHLPNLRALDLSYSKNLIEAP-DFGGVLNLEWIILEGCTNLARIHP 670

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L KL+ L L+NC  L SLP
Sbjct: 671 SVGLLRKLAFLNLKNCISLVSLP 693



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 22/167 (13%)

Query: 480 TSLPTGI-NLDSLKELYLGGC-----SNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
            SLP+ I +L SL  L + GC     + L   P    + +  D+++TA++   +S     
Sbjct: 690 VSLPSNILSLSSLGYLNISGCPKVFSNQLLEKPIHEEHSKMPDIRQTAMQFQSTSSSIFK 749

Query: 534 RLVDLDLT---------NCSG--LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
           RL++L            N +G  L S+ +  C    +R L+LS C  L ++P+ IG++ S
Sbjct: 750 RLINLTFRSSYYSRGYRNSAGCLLPSLPTFFC----MRDLDLSFC-NLSQIPDAIGSMHS 804

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
           LE LNL   +F  +P S+ QLSKL  L L++CK+L+  PE+P  +S+
Sbjct: 805 LETLNLGGNNFVSLPYSINQLSKLVHLNLEHCKQLRYFPEMPSPTSL 851



 Score = 40.0 bits (92), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           +L +L+ L L    NL   P+     N+E + L+  T +  +  S+G L +L  L+L NC
Sbjct: 627 HLPNLRALDLSYSKNLIEAPDFGGVLNLEWIILEGCTNLARIHPSVGLLRKLAFLNLKNC 686

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKL 570
             L S+ S + +L SL  LN+SGC K+
Sbjct: 687 ISLVSLPSNILSLSSLGYLNISGCPKV 713


>gi|23477203|emb|CAD36200.1| TIR-NBS disease resistance protein [Populus trichocarpa]
          Length = 567

 Score =  314 bits (805), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 203/539 (37%), Positives = 297/539 (55%), Gaps = 81/539 (15%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I TF DD +L RG EIS  L  A++ SK
Sbjct: 11  PEGAYDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAVQESK 70

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPS-----DAGYCPSL-- 122
           ISIV+FS+GYASSRWCLNELV+IL+ KN K GQIV+P+FY +DPS     +  +  +   
Sbjct: 71  ISIVVFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFYDIDPSYVRKQNGSFAEAFVK 130

Query: 123 ------------------------GWMGIFDIPTS-ESVLIEGNVNDISKKLSD--LFPS 155
                                   GW  + D+    E+  I+G + D+  KL    L+  
Sbjct: 131 HEECFEEKLVKEWRKALEEAGNLSGW-NLNDMANGHEAKFIKGIIKDVLNKLRRECLYVP 189

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
           ++   LVG++ +  +I   L + + +   VGI G+ GIGKTTIA  +++ +   FEGS F
Sbjct: 190 EH---LVGMD-LDHDISDFLSTATDDVRIVGIHGMPGIGKTTIAKVVFNQLCYRFEGSCF 245

Query: 216 MQNIRDESEKVGGLANIH------------LNFE---------RRRLSRMKVLIVFYDLT 254
           + +I + S++V GL  +              +F+         + RL R +VL+V  ++ 
Sbjct: 246 LSDINERSKQVNGLVPLQKQLLHDILKQDVADFDCVDRGKVLIKERLRRKRVLVVADNVA 305

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
            L Q++ L+G    F P SRVIITTR   LL+          +++KEL  ++SL LFS +
Sbjct: 306 HLDQLNALMGDRSWFGPRSRVIITTRYSSLLRE-----ADQTYQIKELKPDESLQLFSWH 360

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           +F    PA  ++ELS   + Y  G+PLAL+V+G+ L   +  EWES ++ L R+P+ DIQ
Sbjct: 361 SFKDTKPAEDYIELSKKAVDYCGGLPLALEVIGALLYRKNRGEWESEIDNLSRIPNQDIQ 420

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVT- 432
             L +SY  LD E Q  FLD ACFF G ++  V   L A CR + ++ +  L  +SL+  
Sbjct: 421 GKLLISYHALDGELQRAFLDIACFFIGIEEEYVAKVLGARCRLNPEVVLKTLRERSLIQF 480

Query: 433 ----ISNNK--------ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
               I + +        +TMHDLL++MG E+VR+ S    GKR+R+W+ ED + VL + 
Sbjct: 481 HECIIKDERQLFGRTVSVTMHDLLRDMGREVVRESSPLLLGKRTRIWNQEDAWNVLEQQ 539


>gi|357474825|ref|XP_003607698.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508753|gb|AES89895.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1165

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 252/725 (34%), Positives = 362/725 (49%), Gaps = 119/725 (16%)

Query: 1   MASSSSSI----NMIP----HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-K 51
           MA ++ SI    NM+        +DVF+SFRG D R NF  HL +AL    I  F DD K
Sbjct: 1   MACTNKSIIQSSNMVSDQSRKSSYDVFISFRGADTRFNFTDHLFSALQIRGIVAFRDDTK 60

Query: 52  LNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLV 111
           L +G  I+P L  AIE S+  IV+FS  YASS WCL EL  IL      G+ V+PVFY V
Sbjct: 61  LKKGESIAPELLRAIEASRTFIVVFSNNYASSTWCLRELQYILHCVQLSGKRVLPVFYDV 120

Query: 112 DPSDA--------------------------GYCPSL-------GWMGIFDIPTSESV-- 136
           DPS+                           G+  +L       GW  I D P S  +  
Sbjct: 121 DPSEVRKQSGSYKKAFAQHEERFKQDTEVLQGWRTALTQVANLSGW-DIRDKPQSAEIKK 179

Query: 137 LIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGK 195
           ++E  VN ++ K S L P+D    LVG  S+I+ +E  LL    +    VGI G+GG+GK
Sbjct: 180 IVEEIVNILNCKFSSL-PND----LVGTHSLIERLEKLLLLDVVDDVRIVGISGMGGVGK 234

Query: 196 TTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLA-----------NIHL---------N 235
           TT+A  +Y  ISS F+   F+ ++    +  G +A             HL         N
Sbjct: 235 TTLARILYRRISSRFDACCFIDDLSKICKHAGPVAAQKQILSQTLGEEHLQICNLSDGAN 294

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             + RL  ++  I+  ++   +Q++ L         GSR+II +RD  +L N  G  V  
Sbjct: 295 LIQNRLGHLRAFIILDNVDQGEQLEKLALNRKLLGVGSRIIIISRDTHIL-NRYGVDV-- 351

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
           VF+V  L+  +SL LF + AF +++  + + EL   ++ YANG+PLA++ LGS+L G   
Sbjct: 352 VFKVPLLNQTNSLQLFCQQAFKRDNILSNYDELVYEILNYANGLPLAIKALGSFLFGRDI 411

Query: 356 EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR 415
            EW SA+ +L+  P+ DI  VL++S+DGL++ E+ IFLD ACFF G  + LV N L+ C 
Sbjct: 412 YEWRSALTRLRDNPNKDIFDVLRLSFDGLENMEKEIFLDIACFFNGRKEALVKNVLNCCG 471

Query: 416 FSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
           F A IG+  L+ KSL++IS  +KI MH LL+E+G +IV++ S KD  K +RLW  E    
Sbjct: 472 FHADIGLRVLIDKSLISISEKSKIEMHGLLEELGKKIVQENSSKDSRKWTRLWLHEYFNN 531

Query: 475 VLNENT-------------SLPTGI-------NLDSLKELYLGG---------CSNLKRF 505
           V++EN                 T I        +  L+ L L G          SN  R+
Sbjct: 532 VMSENKEKNVEAIVLRRGRQRETKIVIAEALSKMSHLRMLILDGMDFSGSLDCISNELRY 591

Query: 506 PEI-------------SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
            E                 + +L L++++I++L      L  L  L+L N   L  V   
Sbjct: 592 VEWREYPFMYLPSSFQPYQLVELILEDSSIKQLWEGTKYLPNLRTLELRNSKSLIKVPD- 650

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRL 611
              + +L RLNL GC+KLE++   I  L  L YLNL + K+   IP+ +  L+ L  L L
Sbjct: 651 FGEIPNLERLNLKGCVKLEQIDPSISVLRKLVYLNLEDCKNLVTIPNDLFGLTSLEYLNL 710

Query: 612 QNCKR 616
             C +
Sbjct: 711 SGCYK 715



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 2/81 (2%)

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           L +L  LR+L++S C  L ++P+ IG L  LE LNL   +F  +PS  ++LSKL+ L L+
Sbjct: 773 LPSLSCLRKLDISYC-SLSQIPDAIGCLLWLERLNLGGNNFVTLPS-FRELSKLAYLNLE 830

Query: 613 NCKRLQSLPELPCGSSIHARH 633
           NC +L+  PELP  SSI   H
Sbjct: 831 NCMQLKYFPELPSASSIEHEH 851


>gi|451798986|gb|AGF69191.1| TMV resistance protein N-like protein 5 [Vitis labrusca]
          Length = 587

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 202/516 (39%), Positives = 290/516 (56%), Gaps = 59/516 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I +F DD+ L +G +I+  L  AIE S+I I+
Sbjct: 19  YDVFLSFRGGDTRKNFTDHLYTTLTAYGIHSFKDDEELEKGGDIASDLLRAIEESRIFII 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
           IFS+ YA SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L       
Sbjct: 79  IFSKNYAYSRWCLNELVKIIERKSQKESLVLPIFYHVDPSDVRNQKGSFGDALACHERDA 138

Query: 125 -MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFN 183
                ++     + +    N     + D + ++   ++V   +II+ +  Q LS      
Sbjct: 139 NQEKKEMVQKWRIALRKAANLCGCHVDDQYETEVVKEIVN--TIIRRLNHQPLSVGKNIV 196

Query: 184 TVGIWGIGGI-------------------GKTTIASAIYSNISSHFEGSYFMQNIRDES- 223
           +V +  +  +                   GKTTIA AIY+ IS  ++GS F++NIR+ S 
Sbjct: 197 SVHLEKLKSLMNTNLNKVSVVGICGIGGVGKTTIAKAIYNEISYQYDGSSFLKNIRERSK 256

Query: 224 --------EKVGGL---ANIHLN-------FERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
                   E + G+    N  +N         +R LS  +VL++F D+ +LKQ++ L   
Sbjct: 257 GDILQLQQELLHGILKGKNFKVNNIDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEE 316

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F   S +IIT+RD Q+L  +    V   +EV +L+  +++ +FS  AF  N P   +
Sbjct: 317 KDWFEAKSTIIITSRDKQVLAQYG---VDISYEVSKLNKKEAIEVFSLWAFQHNLPKEVY 373

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             LS  +I YANG+PLAL+VLG  L G +  EWESA+ KLK +PHM+I  VL++S+DGLD
Sbjct: 374 KNLSYNIIDYANGLPLALKVLGGSLFGKTRSEWESALCKLKTIPHMEIHNVLRISFDGLD 433

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D ++ IFLD ACFFKGND+  V   L      A+ GI+ L  + L+TIS N + MHDL+Q
Sbjct: 434 DVDKGIFLDVACFFKGNDKDYVSRILGP---YAEYGITTLDDRCLLTISKNMLDMHDLIQ 490

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
           +MG EI+RQE +++ G+RSRLW   D Y VL  N S
Sbjct: 491 QMGWEIIRQECLENLGRRSRLW-DSDAYHVLTRNMS 525


>gi|105922831|gb|ABF81439.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1178

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 234/653 (35%), Positives = 342/653 (52%), Gaps = 82/653 (12%)

Query: 21  SFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEG 79
           SFRGKD R+NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+ S++IFS  
Sbjct: 203 SFRGKDTRNNFTSHLYSNLAQRGIDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSRD 262

Query: 80  YASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSESVLIE 139
           YASS WCL+ELVKI++   + G  V+PVFY VDPS+                T E   +E
Sbjct: 263 YASSPWCLDELVKIVQCMKEMGHTVLPVFYDVDPSE----------------TYEKAFVE 306

Query: 140 GNVNDISKKLSDLFPSDNKDQLVGVES-----IIKEIESQLLSGSTEFNTVGIWGIGGIG 194
              N   + L  +     KD L  V +     + K I       + E   +GI G+GGIG
Sbjct: 307 HEQN-FKENLEKV--QIWKDCLSTVTNLSGWDVRKSINGYKGEETGEAIFIGICGMGGIG 363

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDE-SEKVGGLANIHLNFERRRLSRMKVLIVFY-- 251
           KTT+A  +Y  I   FEGS F+ N+R+  +EK G             + R  V   F   
Sbjct: 364 KTTVARVLYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSFRGI 423

Query: 252 -----------------DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
                            D+ D +Q++ L      F PGSR+IIT+R   +L     +++ 
Sbjct: 424 LMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITSRHSNVLTGIDDTKI- 482

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
             +E ++L+ +D+L LFS+ AF  + PA  F+ LS  V+ YANG+PLAL+V+GS+L G S
Sbjct: 483 --YEAEKLNDDDALMLFSQKAFKNDQPAEDFVGLSKQVVDYANGLPLALEVIGSFLYGRS 540

Query: 355 EEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC 414
             EW  A+N++  +P   I  VL++S+DGL + +Q IFLD ACF KG  +  +   LD C
Sbjct: 541 IPEWRGAINRMNEIPDGKIIDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRILDRC 600

Query: 415 RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
            F+A IGI  L+ +SL+++  +++ MH+LLQ MG EIVR ES ++PG+RSRLW  ED+  
Sbjct: 601 GFNASIGIPVLIERSLISVYRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCL 660

Query: 475 VLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
            L +NT         +++  +KE       N+K F ++S  +  L +    + E P  + 
Sbjct: 661 ALMDNTGKEKIEAIFLDMPGIKEAQW----NMKAFSKMS-KLRLLKIDNMQVSEGPEDLS 715

Query: 531 N--------------------LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           N                    +  LV+L + N S L+ +     +  +L+ +NLS  L L
Sbjct: 716 NKLRFLEWHSCPSKSLPADLQVDELVELHMAN-SSLEQLWYGCKSAVNLKIINLSNSLNL 774

Query: 571 EKLPEEIG--NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            K P+  G  NLE+L  L      FE  P S+    KL  + L NCKR++ LP
Sbjct: 775 IKTPDFTGILNLENL-ILEGCTSLFEVHP-SLAHHKKLQYVNLVNCKRIRILP 825



 Score = 40.4 bits (93), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 58   ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
            I   L  AIE S +S++IFS   AS  WC +ELVKI+   ++     + PV Y V+ S
Sbjct: 1062 IRSRLFEAIEESGLSVIIFSRDCASLPWCFDELVKIVGFMDEMRSDTIFPVSYDVEQS 1119


>gi|357474671|ref|XP_003607620.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508675|gb|AES89817.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1381

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 237/718 (33%), Positives = 369/718 (51%), Gaps = 112/718 (15%)

Query: 5    SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLS 63
            SSS  MI   K+DVF+SFRG+D  +NF  HL AAL R+ I  F DD  L +G  I+P L 
Sbjct: 323  SSSAMMI---KYDVFVSFRGQDTHNNFADHLFAALQRKGIVAFRDDSNLKKGESIAPELL 379

Query: 64   SAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GY 118
             AIE SK+ IV+FS+ YASS WCL EL  IL      G  V+P+FY VDPS+       Y
Sbjct: 380  HAIEASKVFIVLFSKNYASSTWCLRELEYILHCSQVSGTRVLPIFYDVDPSEVRHQNGSY 439

Query: 119  CPSL----------------------------GWMGIFDIPTSESVLIEGNVNDISKKLS 150
              +L                            GW        +E   I   + +IS    
Sbjct: 440  GEALAKHEERFQHESEMVQRWRASLTQVANLSGWDMHHKPQYAEIEKIVEEITNISGHKF 499

Query: 151  DLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSH 209
               P     +LVG+   I+++ + LL  S +    VGI G+GGIGKTT+ +A+   IS  
Sbjct: 500  SCLPK----ELVGINYPIEKVANLLLLDSVDDVRVVGICGMGGIGKTTLTTALCGRISHR 555

Query: 210  FEGSYFMQNI----RDES----------EKVGG----LANIH--LNFERRRLSRMKVLIV 249
            F+   F+ ++    R +           + +GG    + N++   N  + RL R++ LI+
Sbjct: 556  FDVRCFIDDLSRIYRHDGPIGAQKQILHQTLGGEHFQIYNLYDTTNLIQSRLRRLRALII 615

Query: 250  FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
              ++  ++Q+D L    +    GSR++I +RD  +LK +    V  V++V  L+  +SL 
Sbjct: 616  VDNVDKVEQLDKLAVNRECLGAGSRIVIISRDEHILKEYG---VDVVYKVPLLNGTNSLQ 672

Query: 310  LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
            LF + AF  +H  + F +L+  ++ YANG+PLA++VLGS+L G    EW+SA+ +L + P
Sbjct: 673  LFCQKAFKLDHIMSSFDKLTFDILSYANGLPLAIKVLGSFLFGRDIYEWKSALARLSKSP 732

Query: 370  HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
            + DI  V+++S++GL+  E+ IFLD ACFF  + +  V   L+ C F A IG+  L+ KS
Sbjct: 733  NKDIMDVMRLSFEGLEKLEKEIFLDIACFFIQSKKIYVQKVLNCCGFHADIGLRVLIDKS 792

Query: 430  LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------ 482
            L++IS  N I MH LL+E+G EIV+++SIKD  + SR+W  E ++ ++ EN  +      
Sbjct: 793  LLSISEENNIEMHSLLKELGREIVQEKSIKDSRRWSRVWLHEQLHNIMLENVEMKVEAIY 852

Query: 483  -PTGINLDSLKELYLG-----------------------GC-SNLKRFPEI--------- 508
             P  I+ +  + L +G                       GC SN  R+ E          
Sbjct: 853  FPCDIDENETEILIMGEALSKMSHLRLLILKEVKFAGNLGCLSNELRYVEWGRYPFKYLP 912

Query: 509  SC----NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
            +C     + +L ++ +++++L      L  L  LDL++   L+ V      + +L  LNL
Sbjct: 913  ACFQPNQLVELIMRHSSVKQLWKDKKYLPNLKILDLSHSKNLRKVPD-FGEMPNLEELNL 971

Query: 565  SGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             GC+KL ++   IG L  L ++ L + K+   IP+++  LS L  L L  C ++ + P
Sbjct: 972  KGCIKLVQIDPSIGVLRKLVFMKLKDCKNLVSIPNNILGLSSLKYLNLSGCSKVFNNP 1029



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 130/299 (43%), Gaps = 77/299 (25%)

Query: 85  WCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-------------------------- 118
           WCL EL  IL       + V+PVFY VDP +  Y                          
Sbjct: 21  WCLQELESILHCIKVSERHVLPVFYDVDPYEMRYQKGNYVEAFFKHEQRFQQDSEMVQRW 80

Query: 119 ------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIE 172
                   +L W+G  D    +  ++E  +N +  K + L      + L G++S+ +E+E
Sbjct: 81  REAQTQVANL-WLGCADAQIEK--IVEEIMNILGYKSTSL-----PNYLAGMDSLTEELE 132

Query: 173 SQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLAN 231
             LL  S +    VG+ G+GGIGK  IA+A+Y+ I   F   + + ++R      G ++ 
Sbjct: 133 KHLLLDSVDDVRVVGVCGMGGIGKKAIATALYNKIFHQFPVLFLIDDLRKIYRHDGPISL 192

Query: 232 IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGS 291
            H                                 +    GSR+IIT RD  +LK     
Sbjct: 193 SH---------------------------------EWLCAGSRIIITFRDEHILKVFVVD 219

Query: 292 RVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL 350
            V    +V  L+  DSL L SR AF  +H  + + +L++ ++ YANG+PLA++VLGS+L
Sbjct: 220 VVY---KVPLLNGTDSLQLLSRKAFKIDHLMSSYDKLASDILWYANGLPLAIKVLGSFL 275



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 13/163 (7%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSRL 535
             S+P  I  L SLK L L GCS +   P      +  D+    ++    L  +   L  L
Sbjct: 1002 VSIPNNILGLSSLKYLNLSGCSKVFNNPRHLKKFDSSDILFHSQSTTSSLKWTTIGLHSL 1061

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
                LT+C  L S  S  C    L  +++S C  L  LP+ IG L  LE LN+   +F  
Sbjct: 1062 YHEVLTSCL-LPSFLSIYC----LSEVDISFC-GLSYLPDAIGCLLRLERLNIGGNNFVT 1115

Query: 596  IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLK 638
            +PS +++LSKL  L L++CK L+SLP+LP  ++    H T+ K
Sbjct: 1116 LPS-LRELSKLVYLNLEHCKLLESLPQLPFPTAF--EHMTTYK 1155



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 4/150 (2%)

Query: 488  LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
            L +LK L L    NL++ P+     N+E+L+LK    + ++  SIG L +LV + L +C 
Sbjct: 940  LPNLKILDLSHSKNLRKVPDFGEMPNLEELNLKGCIKLVQIDPSIGVLRKLVFMKLKDCK 999

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L S+ + +  L SL+ LNLSGC K+   P  +   +S + L  ++     +  +   L 
Sbjct: 1000 NLVSIPNNILGLSSLKYLNLSGCSKVFNNPRHLKKFDSSDILFHSQSTTSSLKWTTIGLH 1059

Query: 605  KLSDLRLQNCKRLQSLPELPCGSSIHARHC 634
             L    L +C  L S   + C S +    C
Sbjct: 1060 SLYHEVLTSC-LLPSFLSIYCLSEVDISFC 1088


>gi|82542049|gb|ABB82032.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 509

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 197/511 (38%), Positives = 279/511 (54%), Gaps = 73/511 (14%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRG+D R  F  HL  AL +  I TF DD +L RG EIS  L  AI+ SK
Sbjct: 11  PVGAYDVFLSFRGEDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLRAIQESK 70

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSD-------------- 115
           ISIV+FS+GYASSRWCLNELV+IL+ KN K GQIV+P+FY +DPSD              
Sbjct: 71  ISIVVFSKGYASSRWCLNELVEILKCKNRKTGQIVLPIFYDIDPSDVRKQTGSFAEPFDK 130

Query: 116 -------------------AGYCPSLGWMGIFDIPTS-ESVLIEGNVNDISKKLSDLF-- 153
                              AG     GW  + D+    E+  I+  + D+  KL   +  
Sbjct: 131 HEERFEEKLVKEWRKALEEAGKLS--GW-NLNDMANGHEAKFIKEIIKDVLNKLDPKYLY 187

Query: 154 -PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
            P D    L+G+  + + I   L + + +   VGI G+ GIGKTTIA  +++ + + FEG
Sbjct: 188 VPED----LIGMHRLARNIFDFLSTATDDVRIVGIHGMPGIGKTTIAQVVFNQLCNGFEG 243

Query: 213 SYFMQNIRDESEKVGGLANIH--LNFE-------------------RRRLSRMKVLIVFY 251
           S F+ NI + S++  GLA +   L ++                   + RL R +VL+V  
Sbjct: 244 SCFLSNINEASKQFNGLALLQEQLLYDILKQDVANINCVDRGKVLIKERLCRKRVLVVAD 303

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+    Q++ L+G    F PGSRVIITTRD  LL+            ++EL  +++L LF
Sbjct: 304 DVAHQDQLNALMGERSWFGPGSRVIITTRDSNLLRE-----ADQTNRIEELEPDEALQLF 358

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
           S +AF    PA  ++ELS   + Y  G+PLAL V+G+ L   +   WES ++ L R+P+ 
Sbjct: 359 SWHAFKDTKPAKDYIELSKKAVDYCGGLPLALNVIGALLYRKNRVTWESEIDNLSRIPNQ 418

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGND-QYLVMNFLDACRFSAKIGISRLVGKSL 430
           DIQ  L  SY  LD E Q  FLD ACFF G + +Y+     D C ++ ++ +  L  +S+
Sbjct: 419 DIQGKLLTSYHALDGELQRAFLDIACFFIGREKEYVAKQLGDRCGYNPEVVLETLHERSM 478

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPG 461
           + +    +TMHDLL++MG E+VR+ S K+PG
Sbjct: 479 IKVLGETVTMHDLLRDMGREVVRESSPKEPG 509


>gi|357499343|ref|XP_003619960.1| Resistance protein [Medicago truncatula]
 gi|355494975|gb|AES76178.1| Resistance protein [Medicago truncatula]
          Length = 1180

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 241/719 (33%), Positives = 363/719 (50%), Gaps = 111/719 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           M S+SSS++     K+ VFLSFRG D R+ F  +L  AL  + I TF DD+ L RG++I 
Sbjct: 3   MQSTSSSVSY--DFKYQVFLSFRGADTRYEFTGNLYKALTDKGIHTFFDDRELQRGDKIE 60

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC 119
            SL++AIE S+I I +FS  YASS +CL+ELV I+    + G++V+PVFY VDP D  + 
Sbjct: 61  QSLNNAIEESRIFIPVFSANYASSSFCLDELVHIIRVYKEKGRLVLPVFYGVDPGDIRH- 119

Query: 120 PSLGWMGIFDIPTSESVLIEGNVNDISKKL----------SDL----FPSDNKDQLVGVE 165
                 G + I  ++     GN  +  +KL          +DL    F   N  +   + 
Sbjct: 120 ----QRGSYAIHLTKHEKRFGNNKENMEKLLQWKKALKQAADLSGFHFSLGNGYEYKRIG 175

Query: 166 SIIKEIESQ------------------------LLSGSTE--FNTVGIWGIGGIGKTTIA 199
            II+ + +Q                        LL   ++   + VG++GIGG+GK+T+A
Sbjct: 176 EIIRNVTNQINRVSLHVAKYPVGLQSRVQQVKSLLDNESDDVVHMVGLYGIGGLGKSTLA 235

Query: 200 SAIYSNISSHFEGSYFMQNIRDESEKVG-------------------GLANIHLNFERRR 240
            A +++I+  FE   F++N+R+ S K G                   G  +  +   + R
Sbjct: 236 KATFNSIADKFEVFCFLENVRENSAKHGLENLQEQLLLKTIGEEIKLGGVSQGIQIIKDR 295

Query: 241 LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVK 300
           L R KVL++  D+  L+Q+D L G  D F  GSRVIITTRD QLL NH    +  ++EV+
Sbjct: 296 LRRKKVLLILDDIDKLEQLDALAGGFDWFGNGSRVIITTRDKQLLTNH---EIELMYEVE 352

Query: 301 ELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWES 360
            L   ++L L    AF  N   + +  + N  + YA+G+PL L+++GS L G S + W+ 
Sbjct: 353 GLYGTEALELLRWMAFKNNKVPSSYEHILNRAVSYASGLPLVLEIVGSNLFGKSIQIWKG 412

Query: 361 AVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR----F 416
           A++  +R+P   IQ++L+VSYD L++E+Q++FLD AC FK   ++    F D  R     
Sbjct: 413 ALDGYERIPDKKIQEILRVSYDALEEEQQSVFLDIACCFK---EHSWEEFEDILRTHYGH 469

Query: 417 SAKIGISRLVGKSLVTISNNK-----ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
             K  +  L  KSL+ IS +K     +T+HDL+++MG E+VRQ+S K+PG+RSRLW   D
Sbjct: 470 CIKHHVQVLAEKSLIVISRSKWGYIYVTLHDLIKDMGKEVVRQQSSKEPGERSRLWCHND 529

Query: 472 IYQVLNENT----------SLPTG-----------INLDSLKELYLGGCSNLKRFPE-IS 509
           I  VL  NT          + P+            + + +LK L +    +  + PE + 
Sbjct: 530 IIHVLQGNTGTSKVEMLYMNFPSKKTVIDWNGKAFMKMTNLKTLIIKK-GHFSKGPEYLP 588

Query: 510 CNIEDLDLKETAIEELPSSIGN--LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            ++  L       + L SSI N     +    L  C  L  +    C L  L + +   C
Sbjct: 589 SSLRVLKWDRYPSDSLSSSILNKKFENMKVFSLDKCQHLTHIPDVSC-LPILEKFSFKKC 647

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             L  +   IG L+ LE LN       E  P    +L  L DL+L  CK L+S P+L C
Sbjct: 648 RNLITIDISIGYLDKLEILNAENCSKLESFPPL--RLPSLKDLKLSGCKSLKSFPKLLC 704



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 32/195 (16%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SLK+L L GC +LK FP++ C    I+ + L +T+I ELPSS  NL+ L  L +  
Sbjct: 680 LRLPSLKDLKLSGCKSLKSFPKLLCEMTKIKGICLYDTSIGELPSSFRNLNELHYLQIFG 739

Query: 543 CSGLK-------------SVSSRLCNL--------------KSLRRLNLSGCLKLEKLPE 575
              LK             S+S+  CNL               +++ L LS  L    LP 
Sbjct: 740 DGKLKISSNIFAMPNKINSISASGCNLLLPKDNDKMNSEMFSNVKCLRLSNNLSDGCLPI 799

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
            +    ++  L+L+   F+ IP  + +L  + DL L  C+ L+ +  +P    +  A  C
Sbjct: 800 FLKWCVNVTSLDLSGNKFKIIPECLSELHLIVDLSLDFCEYLEEIRGIPPNLYNFSAIGC 859

Query: 635 TSLKTLSNSSTLLTR 649
            SL +LS+   LL++
Sbjct: 860 ESL-SLSSIRMLLSQ 873



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 5/127 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
            +++K   L  C +L   P++SC   +E    K+   +  +  SIG L +L  L+  NCS
Sbjct: 613 FENMKVFSLDKCQHLTHIPDVSCLPILEKFSFKKCRNLITIDISIGYLDKLEILNAENCS 672

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S       L SL+ L LSGC  L+  P+ +  +  ++ + L +    ++PSS + L+
Sbjct: 673 KLESFPP--LRLPSLKDLKLSGCKSLKSFPKLLCEMTKIKGICLYDTSIGELPSSFRNLN 730

Query: 605 KLSDLRL 611
           +L  L++
Sbjct: 731 ELHYLQI 737


>gi|224114321|ref|XP_002332397.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832720|gb|EEE71197.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 523

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 203/521 (38%), Positives = 295/521 (56%), Gaps = 56/521 (10%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P   +DVFLSFRGKD R+NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+
Sbjct: 6   PLYMYDVFLSFRGKDTRNNFTSHLYSNLKQRGIDVYMDDRELERGKTIEPALWKAIEESR 65

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSL--- 122
            S++IFS  YASS WCL+ELVKI++   + GQ V+PVFY VDPS+       Y  +    
Sbjct: 66  FSVIIFSRDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEVIERKRKYEEAFVEH 125

Query: 123 ------------GW---------MGIFDIPT-SESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                        W         +  +DI   +ES  I+     IS KLS   P+ +K +
Sbjct: 126 EQNFKENLEQVRNWKDCLSTVANLSGWDIRNRNESESIKRIAKYISYKLSVTLPTISK-K 184

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           LVG++S ++ +   +     E   +GI G+GGIGKTTIA  +Y +    F+GS F+ N+R
Sbjct: 185 LVGIDSRVEVLNGFIGEEVGEAIFIGICGMGGIGKTTIARVVYDSFRWQFKGSCFLANVR 244

Query: 221 DESEKVGGLANIHLNFERRRLSRMKVLIVFY--------------------DLTDLKQID 260
           D   + GG   +        L     +   Y                    D+ D KQ++
Sbjct: 245 DVFAEKGGPRRLQEQLLSEILMERASVCDSYRGIEMIKRRLRLKKILLILDDVNDKKQLE 304

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L      F PGSR+IIT+RD  +   +  +++   +E ++L+ +D+L LFS+ AF  + 
Sbjct: 305 FLAAEPGWFGPGSRIIITSRDKNVFTGNDDTKI---YEAEKLNDDDALMLFSQKAFKNDQ 361

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           PA  F++LS  V+ YANG+PLAL+V+GS+L G    EW  A+N++  +P  +I KVL VS
Sbjct: 362 PAEDFVKLSKQVVGYANGLPLALEVIGSFLYGRRIPEWRGAINRMNEIPDDEIIKVLLVS 421

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNNKIT 439
           +DGL + E+ IFLD ACF KG     +   LD  R F   IGI  L+ +SL+++S +++ 
Sbjct: 422 FDGLHELEKKIFLDIACFLKGFKIDRITRILDGWRGFHTGIGIPVLIERSLISVSRDQVW 481

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           MH+LLQ+MG EI+R+ES  +PG+RSRLW  ED+   L +NT
Sbjct: 482 MHNLLQKMGQEIIRRESPDEPGRRSRLWTYEDVCLALMDNT 522


>gi|342365842|gb|AEL30375.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 932

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 252/749 (33%), Positives = 346/749 (46%), Gaps = 133/749 (17%)

Query: 1   MASSSSSINMIPHPK---HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGN 56
           +    +S ++ P P+   + VFLSFRG+D R  F SHL AAL R  I T+IDD  L +G+
Sbjct: 3   LVVGEASSSLTPSPRSYTYHVFLSFRGEDTRTRFTSHLYAALNRNGITTYIDDNNLRKGD 62

Query: 57  EISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
            IS  L  AIE S  ++++ S  YASS WCL+EL KIL+   K GQ +V VFY V+PSD 
Sbjct: 63  VISDELLKAIEESMFAVIVLSPNYASSSWCLDELCKILDCSKKLGQHIVTVFYDVEPSDV 122

Query: 117 GY----------------------------CPSLGWMGIFDIPTSESVLIEGNVNDISKK 148
            +                                 + G      +E+ L+E     I + 
Sbjct: 123 RHQKGAFGEAFTKHEQRQDGEKVKKWRDALTQVAAYSGWHSKNRNEAELVESISKHIHEI 182

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L    PS  K+ L+G++S ++++  Q+  G  +   +GIWG+GGI +         +I  
Sbjct: 183 LIPKLPSSMKN-LIGIDSRVEQVICQIGLGLNDVRYIGIWGMGGIVRERCEKKDIPDIQK 241

Query: 209 HFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
                  + +    SE  G          +  L   KVL+V  D+   KQ++ L G  D 
Sbjct: 242 QLLDQMGISSTALYSEYDGR------AILQNSLRLKKVLLVLDDVNHEKQLENLAGEQDW 295

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F  GSR+IITTRD  LL+      V   +EV+ L   ++  LF   AF    P  GFL+L
Sbjct: 296 FGSGSRIIITTRDQHLLQEQG---VHETYEVEGLVEIEAFNLFCSKAFKLPEPTEGFLDL 352

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           +  V+ Y+ G+PLAL+VLGSYL   S E W SA+ K+K   H DI  VLK+SYDGLD  E
Sbjct: 353 TKEVVNYSGGLPLALKVLGSYLYCRSIEVWHSAIGKIKNSSHSDIIDVLKISYDGLDSME 412

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-----ITMHDL 443
           +NIFLD +CFFKG  +      L  C   A+IGI  L+ +SLVTI  +K     + MHDL
Sbjct: 413 KNIFLDISCFFKGRSRDYATKILKLCGHHAEIGIDILINRSLVTIEQDKYGEDTLKMHDL 472

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINL-DSLKELYLG--G 498
           ++EMG  IV QES  D  KRSRLW  +DI  VL +N  T     I L D   ELY     
Sbjct: 473 IEEMGKLIVNQESPDDASKRSRLWCEDDIDLVLRQNKETKATRSIVLYDKRDELYWNDLA 532

Query: 499 CSNLKRFP-------------EISCNIEDLDLKETAIEELP------------------- 526
            SN+ +                I C +  L      +E LP                   
Sbjct: 533 FSNICQLKLLILDGVKSPILCNIPCTLRVLHWNGCPMETLPFTDEHYELVEIDLYLSKIV 592

Query: 527 -----------------SSIGNLSRLVD---------LDLTNCSGLKSVSSRLCNLK--- 557
                            S+  NL +  D         LDL+ CS L  +   L + K   
Sbjct: 593 HVWHGKKFLEKLKYLNLSNSHNLKQTPDLSGAPNLETLDLSCCSELNDIHQSLIHHKNLL 652

Query: 558 --------------------SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
                               SL+ L+L  C  L KLP+    ++ L  L L+     ++P
Sbjct: 653 ELNLIKCGSLQTLGDKLEMSSLKELDLYECNSLRKLPKFGECMKRLSILTLSCTGITELP 712

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
           +++  L  LS+L LQ CKRL  LP+   G
Sbjct: 713 TTVGNLVGLSELDLQGCKRLTCLPDTISG 741



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           +L   + + SLKEL L  C++L++ P   E    +  L L  T I ELP+++GNL  L +
Sbjct: 664 TLGDKLEMSSLKELDLYECNSLRKLPKFGECMKRLSILTLSCTGITELPTTVGNLVGLSE 723

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
           LDL  C  L  +   +  LKSL  L++S C
Sbjct: 724 LDLQGCKRLTCLPDTISGLKSLTALDVSDC 753


>gi|297805932|ref|XP_002870850.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316686|gb|EFH47109.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 240/712 (33%), Positives = 348/712 (48%), Gaps = 118/712 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR NF++H+      + I  FID+ + R   I P L  AI+GSKI+IV
Sbjct: 61  KHDVFPSFHGADVRKNFLAHILKEFKGKGIVPFIDNDIERSKSIGPELIEAIKGSKIAIV 120

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------YCPSL 122
           + S  YASS WCLNELV+I+  + + GQ V+ +FY VDP+D               C   
Sbjct: 121 LLSRNYASSSWCLNELVEIMNCREELGQTVMTIFYDVDPTDVKKQTGDFGKVFKKTCKGK 180

Query: 123 G------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W  + +   +           E+ + E    D+S  L+   PS + D  +G+ 
Sbjct: 181 TKEDIKRWQNVLEAVATIAGEHSCNWDNEAAMTEKIATDVSNMLNRYSPSRDFDGFIGMG 240

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD---- 221
           + + E+ES L   S E   +GIWG  GIGKTTIA  +YS  S +FE S FM+NI++    
Sbjct: 241 AHMNEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSENFELSIFMENIKELMYT 300

Query: 222 --------------ESEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                         + + +  + N       HL   + RL+  +VLIV   +    Q+D 
Sbjct: 301 RPVCSDEYSAKIQLQQQFLSQIINHKDMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDA 360

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           +      F  GSR+IITT+D +LLK H    + H+++V+  S  ++  +F   AFGQN P
Sbjct: 361 IAKETRWFGHGSRIIITTQDQRLLKAH---GINHIYKVEFPSAYEAYQIFCMYAFGQNFP 417

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF EL+  V K    +PL L+V+GS+ +GMS  EW +A+ +LK      IQ +LK SY
Sbjct: 418 KDGFEELAWQVTKLLGNLPLGLRVMGSHFRGMSRHEWVNALPRLKIRLDASIQSILKFSY 477

Query: 382 DGLDDEEQNIFLDTACFFKGN---DQYLVMNFLDACRFSAKIGISRLVGKSLVTIS---- 434
           D L DE++++FL  AC F  +     YL ++FLD      + G+  L  KSL+ +     
Sbjct: 478 DALCDEDKDLFLHIACLFNNDGMVKDYLALSFLD-----VRQGLHLLAEKSLIALEIFSA 532

Query: 435 -NNKITMHDLLQEMGGEIVR----QESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD 489
               I MH+LL ++G +IVR     +SI  PGKR  L    DI +VL +NT     I + 
Sbjct: 533 DYTHIKMHNLLVQLGRDIVRHKPGHQSICAPGKRQFLVDARDICEVLTDNTGSRNVIGI- 591

Query: 490 SLKELY------------LGGCSNLK--RF-------------PE----ISCNIEDLDLK 518
            L E+Y              G SNLK  RF             P+    +   +  L+  
Sbjct: 592 -LFEVYTLSGELNISERAFEGMSNLKFLRFHGPYDGQSDKLYLPQGLNNLPRKLRILEWS 650

Query: 519 ETAIEELPSSIGNLSRLVDL-----DLTNCSGLKSVSSR--LCNLKSLRRLNLSGCLKLE 571
              ++ LPS+      LV L      L N      VS R  L  L +L+R++L     L+
Sbjct: 651 HFPMKCLPSNFCT-KYLVQLCMGYSKLQNLWQGNQVSKRSDLPVLGNLKRMDLWESKHLK 709

Query: 572 KLPE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +LP+     NLE L     +     ++PSS+  L KL  L L+ C +L++LP
Sbjct: 710 ELPDLSTATNLEKLTLFGCS--SLAELPSSLGNLQKLRMLNLRGCSKLEALP 759



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 72/279 (25%)

Query: 408 MNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPG--KRSR 465
           +  L+   F  K   S    K LV +      + +L Q  G ++ ++  +   G  KR  
Sbjct: 644 LRILEWSHFPMKCLPSNFCTKYLVQLCMGYSKLQNLWQ--GNQVSKRSDLPVLGNLKRMD 701

Query: 466 LWHPEDIYQVLNENTS----------------LPTGI-NLDSLKELYLGGCSNL------ 502
           LW  + + ++ + +T+                LP+ + NL  L+ L L GCS L      
Sbjct: 702 LWESKHLKELPDLSTATNLEKLTLFGCSSLAELPSSLGNLQKLRMLNLRGCSKLEALPTN 761

Query: 503 -----------------KRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
                            K FPEIS NI+DL L  TAI+E+PS+I + S L +L+++    
Sbjct: 762 INLESLDDLDLADCLLIKSFPEISTNIKDLMLTYTAIKEVPSTIKSWSHLRNLEMSYNDN 821

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           LK                        + P  +  +  L Y N  + + ++IP  +K++S+
Sbjct: 822 LK------------------------EFPHALDIITKL-YFN--DTEIQEIPLWVKKISR 854

Query: 606 LSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           L  L L+ CKRL ++P+L    S++ A +C SL+ L  S
Sbjct: 855 LQTLVLEGCKRLVTIPQLSDSLSNVTAINCQSLERLDFS 893


>gi|51477390|gb|AAU04763.1| MRGH8 [Cucumis melo]
          Length = 1058

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 255/778 (32%), Positives = 381/778 (48%), Gaps = 133/778 (17%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHN------FVSHLNAALCREKIETFID--DKLNRGN 56
           S S+ + P  ++DVFLS R KD R N      F+S L+ AL  + I  FID  D+ + G 
Sbjct: 22  SISLPLPPLRRYDVFLSHRAKDHRANNDTGRSFISDLHEALTSQGIVVFIDKEDEEDGGK 81

Query: 57  EISPSLSSAIEGSKISIVIFSEGYASSRW-CLNELVKILESKNKYGQIVVPVFYLVDPSD 115
            ++  +  A++ S+ SIV+FSE Y S  W C+ E+ KI   +    Q+V+P+FY VDP D
Sbjct: 82  PLTEKMK-AVDESRSSIVVFSENYGS--WVCMKEIRKIRMCQKLRDQLVLPIFYKVDPGD 138

Query: 116 AG---------------YCPSL-------------------GW--------MGIFDIPTS 133
                              P++                   GW        +      +S
Sbjct: 139 VRKQEGESLVKFFNEHEANPNISIEEVKKWRKSMNKVGNLSGWHLQDSQLNITFKQFCSS 198

Query: 134 ESVLIEGNVNDISKKL-SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGG 192
           E   I+  VN +  KL  DLF  D  D+LVG+   + +I   L  G  +   VGIWG+GG
Sbjct: 199 EEGAIKEIVNHVFNKLRPDLFRYD--DKLVGISQRLHQINMLLGIGLDDIRFVGIWGMGG 256

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH------------------- 233
           IGKTT+A  IY ++S  F+G YF+ N++ E+ K  G+A++                    
Sbjct: 257 IGKTTLARIIYRSVSHLFDGCYFLDNVK-EALKKQGIASLQEKLLTGALMKRNIDIPNAD 315

Query: 234 -LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
                +RR+S +K LI+  D+  L Q+  L G  D F  GSR+I+TTR+  LL +H    
Sbjct: 316 GATLIKRRISNIKALIILDDVDHLSQLQQLAGSSDWFGSGSRIIVTTRNEHLLVSHG--- 372

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           +   ++V+ L+  ++L LFS+ AFG N+P   + +LS  V++Y+  +PLA++VLGS L+ 
Sbjct: 373 IEKRYKVEGLNVEEALQLFSQKAFGTNYPKKDYFDLSIQVVEYSGDLPLAIEVLGSSLRD 432

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            S E W++AV KLK +    I ++L+VSYD LD  E+ IFLD ACFFK   +   +  L 
Sbjct: 433 KSREVWKNAVEKLKEIRDKKILEILRVSYDLLDKSEKEIFLDLACFFKKKSKKQAIEVLQ 492

Query: 413 ACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI 472
           +  F A IG+  L  +SL+T  + KI MHDL+QEMG E+VR+    +P KR+RLW  ED+
Sbjct: 493 SFGFQAIIGLEILEERSLITTPHEKIQMHDLIQEMGQEVVRRMFPNNPEKRTRLWLREDV 552

Query: 473 YQVLNENTSLPT--GINLDS-------LKELYLGGCSNLK-------------------- 503
              L+ +       GI +DS       L        +NL+                    
Sbjct: 553 NLALSHDQGAEAIEGIVMDSSEEGESHLNAKVFSTMTNLRILKINNVSLCGELDYLSDQL 612

Query: 504 RF------------PEISC-NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           RF            P     +I +L+L  + I  L      L RL  ++L++ S   S +
Sbjct: 613 RFLSWHGYPSKYLPPNFHPKSILELELPNSFIHYLWKGSKRLDRLKTVNLSD-SQFISKT 671

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
                + +L RL LSGC++L KL + +G+L+ L  L+L   K  + IP S+  L  L  L
Sbjct: 672 PDFSGVPNLERLILSGCVRLTKLHQSLGSLKRLIQLDLKNCKALKAIPFSI-SLESLIVL 730

Query: 610 RLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWD---IFNFSNCSN 664
            L NC  L++ P +      + ++ T L     S   L  S  H     + N  NC+N
Sbjct: 731 SLSNCSSLKNFPNIVG----NMKNLTELHLDGTSIQELHPSIGHLTGLVLLNLENCTN 784



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 97/198 (48%), Gaps = 31/198 (15%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           LP  I +L  LK L L GCS L R PE      ++E LD+  T I + P S   L  L +
Sbjct: 788 LPNTIGSLICLKTLTLHGCSKLTRIPESLGFIASLEKLDVTNTCINQAPLS---LQLLTN 844

Query: 538 LDLTNCSGLK----------------------SVSSRLCNLKSLRRLNLSGC-LKLEKLP 574
           L++ +C GL                         +  L +  S+++LNLS C LK   +P
Sbjct: 845 LEILDCRGLSRKFIHSLFPSWNSSSYSSQLGLKFTYCLSSFCSMKKLNLSDCSLKDGDIP 904

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARH 633
           + + +L SLE L+L+   F  +P S++ L  L  L L NCKRLQ LP+LP    S+ AR 
Sbjct: 905 DNLQSLPSLEILDLSGNSFSFLPKSVEHLVNLRTLYLVNCKRLQELPKLPLSVRSVEARD 964

Query: 634 CTSLKTLSNSSTLLTRSS 651
           C SLK   N    +  SS
Sbjct: 965 CVSLKEYYNQEKQMPSSS 982



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 83/139 (59%), Gaps = 3/139 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           ++P  I+L+SL  L L  CS+LK FP I  N++   +L L  T+I+EL  SIG+L+ LV 
Sbjct: 717 AIPFSISLESLIVLSLSNCSSLKNFPNIVGNMKNLTELHLDGTSIQELHPSIGHLTGLVL 776

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L NC+ L  + + + +L  L+ L L GC KL ++PE +G + SLE L++      + P
Sbjct: 777 LNLENCTNLLELPNTIGSLICLKTLTLHGCSKLTRIPESLGFIASLEKLDVTNTCINQAP 836

Query: 598 SSMKQLSKLSDLRLQNCKR 616
            S++ L+ L  L  +   R
Sbjct: 837 LSLQLLTNLEILDCRGLSR 855



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 12/188 (6%)

Query: 467 WHPEDIYQVLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET 520
           +HP+ I ++   N+ +         LD LK + L     + + P+ S   N+E L L   
Sbjct: 629 FHPKSILELELPNSFIHYLWKGSKRLDRLKTVNLSDSQFISKTPDFSGVPNLERLILSGC 688

Query: 521 A-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
             + +L  S+G+L RL+ LDL NC  LK++   + +L+SL  L+LS C  L+  P  +GN
Sbjct: 689 VRLTKLHQSLGSLKRLIQLDLKNCKALKAIPFSI-SLESLIVLSLSNCSSLKNFPNIVGN 747

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCT 635
           +++L  L+L     +++  S+  L+ L  L L+NC  L  LP     L C  ++    C+
Sbjct: 748 MKNLTELHLDGTSIQELHPSIGHLTGLVLLNLENCTNLLELPNTIGSLICLKTLTLHGCS 807

Query: 636 SLKTLSNS 643
            L  +  S
Sbjct: 808 KLTRIPES 815


>gi|297837267|ref|XP_002886515.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332356|gb|EFH62774.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1028

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 236/753 (31%), Positives = 364/753 (48%), Gaps = 153/753 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VF SF G DVR  F+SHL        I  F D  + R   I+P+L+ AI  S+I+IV+
Sbjct: 13  YRVFASFHGPDVRKTFLSHLRKQFNYNGITMFDDQGIERSQTIAPALTRAINESRIAIVV 72

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------- 116
            S+ YASS WCL+ELV+IL+ K   GQIV+ VFY VDP D                    
Sbjct: 73  LSKNYASSSWCLDELVQILKCKEDRGQIVMTVFYGVDPHDVRKQTGDFGRAFNETCARKT 132

Query: 117 -----GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 +  +L ++G      F    +E+ +IE    D+S K+ +  PS + D +VG+E+
Sbjct: 133 EEERRKWSQALNYVGNIAGEHFRNWDNEAKMIEKIARDVSDKV-NATPSRDFDDMVGLET 191

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            ++ ++S L   +     VGI G  GIGKTTIA A+ +  S+ F+ S FM N R  S  +
Sbjct: 192 HLRMMQSLLDLDNDGVMMVGISGPAGIGKTTIARALKNLFSNRFQLSCFMDNFRG-SYPI 250

Query: 227 G----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
           G                      G+   HL   + RL  MKVLI+  D+ D+KQ++ L+ 
Sbjct: 251 GFDEYGFKLRLQEELLSKILNQSGMRISHLGVIQERLCDMKVLIILDDVNDVKQLEALVN 310

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
               F PGSR+I+TT + ++L  H    + +V+ V   S  ++L +  R AF Q+ P   
Sbjct: 311 ENSWFGPGSRIIVTTENKEILHRHG---IDNVYNVGFPSDEEALKILCRYAFKQSSPRHS 367

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           FL ++  V +    +PL L+V+GS L G +E+EW+  V +L+ +   +I++VL+V Y+ L
Sbjct: 368 FLMMAKWVAQLCGNLPLGLRVVGSSLHGKNEDEWKYIVRRLETIMDGEIEEVLRVGYESL 427

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDL 443
            + EQ +FL  A FF   D  LV   L       + G+  L+ KSL+ IS+  +I MH+L
Sbjct: 428 HENEQTLFLHIAIFFNYEDGDLVKAMLADNSLDIEHGLKILINKSLIHISSKGEILMHNL 487

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGIN-------------- 487
           LQ+MG + +R++   +P KR  L   ++I  VL  N N  +P  ++              
Sbjct: 488 LQQMGRQAIRRQ---EPWKRRILIDAQEICDVLENNTNAHIPEEMDYLPPLRLLRWEAYP 544

Query: 488 --------------------------------LDSLKELYLGGCSNLKRFPEIS--CNIE 513
                                           L +LK++ L     LK  P++S   N+E
Sbjct: 545 SKTLPLRFCPENLVELSMEDSQLKKLWEGTQLLTNLKKMDLSRSLELKELPDLSNATNLE 604

Query: 514 DLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            L+L   T++ ELPSSI NL +L D+ + +C  L+ + + + NL SL+R++++GC +L  
Sbjct: 605 TLELSGCTSLVELPSSIANLQKLEDIMMNSCQKLEVIPTNI-NLTSLKRIHMAGCSRLAS 663

Query: 573 LPEEIGNLESLEY-----------------------------------------LNLAEK 591
            P    N+ +L+                                          L+L+  
Sbjct: 664 FPNFSTNITALDISDTSVDVLPALIVHWSHLYYIDIRGRGKYKNASNFPGCVGRLDLSYT 723

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           D +KIP  +K L  L  + L  C++L SLPELP
Sbjct: 724 DVDKIPDCIKDLLWLQRIYLSCCRKLTSLPELP 756


>gi|357446429|ref|XP_003593492.1| Disease resistance-like protein GS4-5 [Medicago truncatula]
 gi|355482540|gb|AES63743.1| Disease resistance-like protein GS4-5 [Medicago truncatula]
          Length = 895

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 199/529 (37%), Positives = 305/529 (57%), Gaps = 68/529 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+ F  +L  AL      TFIDD+ L+ G+EI+ SL  AIE S I I 
Sbjct: 17  YDVFLSFRGTDTRYGFTGNLYRALSDGGFCTFIDDRELHGGDEITQSLVKAIEESMIFIP 76

Query: 75  IFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSDA----------------- 116
           +FS  YASS +CL+ELV I+     + G+ ++P+FY V+PS                   
Sbjct: 77  VFSINYASSIFCLDELVHIIHCFDQEKGRKILPIFYDVEPSHVRHQTGSYGKAIARHEKR 136

Query: 117 ------GYCPSLGWMGIFDIPTSESVLIEGN------------VNDISKKLSDLF---PS 155
                  Y  ++  +  + +  +++  + G+            + DI K +S+     P 
Sbjct: 137 FQNNKEKYNYNMKRLHKWKMALNQAANLSGHHFNPRNEYQYKFIGDIVKNVSNKINRAPL 196

Query: 156 DNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
              D  VG++S + ++ S L ++ + E   +GI+G+GG+GKTT+A A+Y+ I++ FE   
Sbjct: 197 HVVDYPVGMQSRVLKVNSLLEVASNYEVKMIGIYGLGGMGKTTLARAVYNFIANQFECVC 256

Query: 215 FMQNIRDESEKVGGLANIHLNFE--------------------RRRLSRMKVLIVFYDLT 254
           F+ N+R+ S K  GL ++  +F                     ++RL R KVL+V  D+ 
Sbjct: 257 FLHNVRENSAK-HGLEHLQKDFLSKTVGLDIKLGDSSEGIPIIKQRLHRKKVLLVLDDVN 315

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           +LKQ+ +L G LD F  GSRVIITTRD  LL +H    +   +E+ EL+  ++L L +  
Sbjct: 316 ELKQVQVLAGGLDWFSVGSRVIITTRDKHLLSSHG---IELTYEIDELNKEEALELLTWK 372

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF      + +  + N  + YA+G+PLAL+VLGS L G + +EW S +++ +R+P+ +IQ
Sbjct: 373 AFKSKQVNSSYEHVLNRAVNYASGLPLALEVLGSNLFGKNIKEWNSLLDRYERIPNKEIQ 432

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISRLVGKSLVTI 433
           K+LKVS+D L+++EQ++FLD AC FKG +   + + L D      K  I  LV K+L+ I
Sbjct: 433 KILKVSFDALEEDEQSVFLDIACCFKGYNLKQMEDMLSDHYGQCMKYHIGVLVKKTLLRI 492

Query: 434 S--NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
              N  +TMHDL+++MG EIVRQES+++PGKRSRLW  EDI+Q + EN+
Sbjct: 493 CRWNYSVTMHDLIEDMGKEIVRQESVREPGKRSRLWFHEDIFQAIEENS 541



 Score = 42.7 bits (99), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 20/131 (15%)

Query: 499 CSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLSRLVDLDLTN--------CSGL- 546
           C  LK+FPEI   +E+   +DL+ET+I+ELP S  NL  +  L L          CS L 
Sbjct: 762 CYRLKKFPEILVKMENIVGIDLEETSIDELPDSFQNLIGIQYLILDGHGIFLRFPCSTLM 821

Query: 547 -----KSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
                   SS L +  +++ + L+ C L  E LP  +    ++ YL+L++ +F  +P  +
Sbjct: 822 MPKQSDKPSSMLSS--NVQVIVLTNCNLTDESLPIVLRWFTNVTYLHLSKNNFTILPECI 879

Query: 601 KQLSKLSDLRL 611
           ++   L  L L
Sbjct: 880 EEHGSLRILNL 890


>gi|399920191|gb|AFP55538.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1320

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 203/534 (38%), Positives = 294/534 (55%), Gaps = 62/534 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +ASS S+       K+DVFLSFRG+D R  F  +L   L R+ I TF DD +L RG  IS
Sbjct: 8   IASSGSAFPW----KYDVFLSFRGEDTRKGFTGYLYHELQRQGIRTFRDDPQLERGTAIS 63

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P L +AI+ S+ +IV+ S  YA+S WCL EL KI+E   + G I+ P+FY VDPS     
Sbjct: 64  PELLTAIKQSRFAIVVLSPKYATSTWCLLELSKIIECMEERGTIL-PIFYEVDPSHVRHQ 122

Query: 117 -----------------------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SD 151
                                  G+  +L  +      TS+    E   + +I + L S 
Sbjct: 123 RGRFAEAFQEHEEKFGEGNKEVEGWRDALTKVASLAGWTSKDYRYETELIREIVQALWSK 182

Query: 152 LFPS----DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           + PS     + ++LVG+ + ++EI+  L   + +   +GIWG+GG+GKTT+A  +Y  IS
Sbjct: 183 VHPSLTVFGSSEKLVGMHTKLEEIDVLLDIETNDVRFIGIWGMGGLGKTTLARLVYEKIS 242

Query: 208 SHFEGSYFMQNIRDES------------------EKVGGLANIH--LNFERRRLSRMKVL 247
             FE   F+ N+R+ S                  E+   + N++  +   +R      VL
Sbjct: 243 HQFEVCVFLANVREVSATHGLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVL 302

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+   +Q++ L G  D F   SR+IITTRD  +L  H    +   +E+K L  +++
Sbjct: 303 LVLDDVDQSEQLEHLAGEKDWFGLRSRIIITTRDRHVLVTHD---IEKPYELKGLEEDEA 359

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LFS  AF ++ P   + E S  V++ A G+PLAL+ LGS+L   S + WESA+ KL+ 
Sbjct: 360 LQLFSWKAFRKHEPEEDYAEQSKSVVRIAGGLPLALKTLGSFLCKRSPDAWESALAKLQN 419

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
            P   +  +LKVSYDGLD+ E+ IFLD ACF    +  L++  L +     +I I  LV 
Sbjct: 420 TPEKTVFDLLKVSYDGLDEMEKKIFLDIACFSSQCEAKLIIELLYSYDVCTRIAIDVLVE 479

Query: 428 KSLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           KSL+TIS+N +I MHDL++EMG EIVRQ+S K+PG RSRLW   DI+ V  +NT
Sbjct: 480 KSLLTISSNTEIGMHDLIREMGCEIVRQQSPKEPGGRSRLWLRNDIFHVFTKNT 533



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 120/238 (50%), Gaps = 44/238 (18%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LK 518
           KR ++W+    ++      SLP+ +N++ L+   + GCS LK  PE    ++ L    L 
Sbjct: 729 KRLKIWN----FRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMKRLSKFCLG 784

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNCSGLKSVSSRLCNLKSLR----------------- 560
            TA+E+LPSS  +LS  LV+LDL+     +   S    L++LR                 
Sbjct: 785 GTAVEKLPSSFEHLSESLVELDLSGIVIREQPYSFFLKLQNLRVSVCGLFPRKSPHPLIP 844

Query: 561 ------------RLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
                        LNLS C   E ++P +IG+L SL+YL L   +F  +P+S++ LSKL 
Sbjct: 845 VLASLKHFSYLTELNLSDCNLCEGEIPNDIGSLSSLKYLELGGNNFVSLPASIRLLSKLR 904

Query: 608 DLRLQNCKRLQSLPELPCGSS---IHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            + ++NC RLQ LPELP  S    +   +CTSL+   +    L+R S+ W   + SNC
Sbjct: 905 HIDVENCTRLQQLPELPPASDRILVTTDNCTSLQVFPDPPD-LSRVSEFW--LDCSNC 959



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 21/126 (16%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T  P    + +L++L L GC+NL +                    +  SI  L RL   +
Sbjct: 696 TRTPDFTGIQNLEKLVLEGCTNLVK--------------------IHPSIALLKRLKIWN 735

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
             NC  +KS+ S + N++ L   ++SGC KL+ +PE +G ++ L    L     EK+PSS
Sbjct: 736 FRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQMKRLSKFCLGGTAVEKLPSS 794

Query: 600 MKQLSK 605
            + LS+
Sbjct: 795 FEHLSE 800


>gi|357499585|ref|XP_003620081.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
 gi|355495096|gb|AES76299.1| Disease resistance-like protein GS4-7 [Medicago truncatula]
          Length = 1076

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 250/714 (35%), Positives = 365/714 (51%), Gaps = 103/714 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+ F  +L   LCR++I TFIDDK L RG+EI+PSL  AIE S+I I 
Sbjct: 20  YDVFLSFRGSDTRYGFTGNLYKDLCRKRIRTFIDDKDLQRGDEITPSLFKAIEESRIFIP 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQI------------VVPVFYLVDPSDAGYCPSL 122
           I S  YASS +CL+ELV I+    + GQ+             + +    + S   + P  
Sbjct: 80  ILSINYASSSFCLDELVHIIHCFKENGQVNSTDSMERLQKWKMALTQTANFSGHHFSPGN 139

Query: 123 GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGST-E 181
           G+         E   IE  V  + +K+S + P    D  VG+ES I E+ S +  GS  +
Sbjct: 140 GY---------EYEFIEKIVKYVFRKISCV-PLYVADYPVGLESRILEVNSLIDVGSNGK 189

Query: 182 FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG-------------- 227
              +GI+G GG+GKTT+A A+Y++I+  F+G  F+  I   S K G              
Sbjct: 190 VQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLNEISANSAKYGLEHLQEKLLSKLVE 249

Query: 228 -----GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDV 282
                G  N  +   ++RL R KVL++  D+ +LKQ+ +L G LD F PGSRVI+TTRD 
Sbjct: 250 LYVKLGDVNDGVPIIKQRLHRKKVLLILDDVHELKQLQVLAGGLDWFGPGSRVIVTTRDK 309

Query: 283 QLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLA 342
            LLK+H   R    +E+ +L   ++L L   N F  N   + F  +    + YA+G+PLA
Sbjct: 310 HLLKSHGIERA---YEIPKLIKREALELLRWNTFKNNKVDSNFDGILYCAVTYASGLPLA 366

Query: 343 LQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGN 402
           L+V+GS L G +  E +SA+ + +R+P   IQ +LKVS+D LD++EQN+FLD AC F G 
Sbjct: 367 LEVVGSNLFGKNIVECKSALYQYERIPIKKIQAILKVSFDALDEDEQNVFLDIACCFNGY 426

Query: 403 DQYLVMNFLDACRF-SAKIGISRLVGKSLVTIS----NNKITMHDLLQEMGGEIVRQESI 457
           +   + + L A    S K  IS L+ KSL+ I+     + +T+H L++++G EIVRQES+
Sbjct: 427 ELKELEDILHAHYGNSMKYQISVLLEKSLIKINQFWETSYLTLHALMEQIGKEIVRQESL 486

Query: 458 KDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKELY-----LGGCSNLK----R 504
           K+PGK SRLW  +DI  VL E+         G+ L S+   +     + G S ++     
Sbjct: 487 KEPGKCSRLWFHKDIIHVLEESKVNILIFMNGLLLSSVCSFFTNPINVYGSSKIEIIYLE 546

Query: 505 FPEISCNIEDL---------DLKETAIEE---------LPSSIGNL------SRLVDLDL 540
           FP     + D          +LK   ++           P SI  L      SR V  D+
Sbjct: 547 FPSSEQKVVDWKGDELKKMQNLKTLIVKNGSFSKGPKYFPDSIRVLEWHKYPSRFVPSDI 606

Query: 541 -----TNCSGLKS--VSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
                + C   +S   S  LC       ++R LNL  C  L ++  ++ NL +LE  +  
Sbjct: 607 FPKKRSVCKLQESDFSSYELCGTMKMFVNMRELNLDKCQFLTRI-HDVSNLPNLEIFSFQ 665

Query: 590 E-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
             K+  +I  S   L+KL  L    C +L   P +   S   +   +C SLKT 
Sbjct: 666 GCKNLIEIHRSFGFLNKLEILNATGCSKLMRFPPMKSMSLRELMLSYCESLKTF 719



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 14/154 (9%)

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETA----IEELPSSIGNLSRLVDLDLTNCSG 545
           +++EL L  C  L R  ++S N+ +L++        + E+  S G L++L  L+ T CS 
Sbjct: 635 NMRELNLDKCQFLTRIHDVS-NLPNLEIFSFQGCKNLIEIHRSFGFLNKLEILNATGCSK 693

Query: 546 LKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           L     R   +KS  LR L LS C  L+  PE +G ++++ Y+ L +   EK+P S + L
Sbjct: 694 L----MRFPPMKSMSLRELMLSYCESLKTFPEILGEVKNITYITLTDTSIEKLPVSFQNL 749

Query: 604 SKLSDLRLQNCKRLQ---SLPELPCGSSIHARHC 634
           + LS+L+++    L+   S+  +P  S I A  C
Sbjct: 750 TGLSNLKIKGKGMLRLPSSIFRMPNLSDITANGC 783



 Score = 45.4 bits (106), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 53/204 (25%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC-------------------------NIEDLDLKETAI 522
           L+ L+ L   GCS L RFP +                           NI  + L +T+I
Sbjct: 680 LNKLEILNATGCSKLMRFPPMKSMSLRELMLSYCESLKTFPEILGEVKNITYITLTDTSI 739

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC--------------- 567
           E+LP S  NL+ L +L +    G+  + S +  + +L  +  +GC               
Sbjct: 740 EKLPVSFQNLTGLSNLKIKG-KGMLRLPSSIFRMPNLSDITANGCILSKLDDKFSSMVFT 798

Query: 568 ----LKLEK-------LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
               +KL+K       LP  +    ++E L+L+   F  +P  +K    LS L L +CK 
Sbjct: 799 CPNDIKLKKCNLSDEFLPILVMWSANVEILDLSGNSFTILPECIKDCRFLSKLTLDDCKC 858

Query: 617 LQSLPELPCG-SSIHARHCTSLKT 639
           L+ +  +P     + A+ C SL +
Sbjct: 859 LREIRGIPPNLKYLSAKCCKSLTS 882


>gi|317415950|emb|CAR94516.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 807

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 251/743 (33%), Positives = 382/743 (51%), Gaps = 135/743 (18%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSK 70
           P PK +VFLSFR  D R  F  +L  AL    I TF+D ++L  G  +S  L  A E S+
Sbjct: 19  PPPKCEVFLSFRSFDSRKGFTDNLYKALIHYGIHTFMDAEQLESGEPVSTELFKATEESQ 78

Query: 71  ISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDA----------GYC 119
           IS++I S  YA+S WCLNELV ++E ++N   ++++PVFY + PS+A          G+ 
Sbjct: 79  ISVIILSTNYATSTWCLNELVTMVELAENNESRLILPVFYGMTPSEARKQIGVHFEEGFA 138

Query: 120 --------------------PSLGWMGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDN 157
                                ++  +  +DI    +E+++IE  V  I   L + F +D 
Sbjct: 139 QHKKDFEGEPGEVARWKKSLTAIANLSGYDIRNYRNETMVIEKIVERIFGVLINTFSNDL 198

Query: 158 KDQLVGVESIIKEIESQLLS-GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           KD  VG++ +  EI+S +   G+ E   +GI G+ GIGK+TIA A+   I + F+   F+
Sbjct: 199 KD-FVGMDRV-NEIKSNMSRIGTEEVRVIGICGMPGIGKSTIAKALSQRIRNQFDAFSFI 256

Query: 217 QNIRDESEKVG------GLANIHLNFE----------RRRLSRMKVLIVFYDLTDLKQID 260
             + + S K         L +  LN +          R+RL   +VLIV  ++ +L+QID
Sbjct: 257 SKVGEISRKKSLFHIKEQLCDHLLNMQVTTKNVDDVIRKRLCNKRVLIVLDNVEELEQID 316

Query: 261 LLIGRLDG-------FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            + G  DG       F  GS++IITT   +LL N+       ++ +++L+ ++SL LF R
Sbjct: 317 AVAGN-DGADELSSRFGKGSKIIITTACERLLINYNPK----IYTIEKLTQDESLLLFCR 371

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF ++HP  G+ +L    + Y +G+PLAL+V G+ L   S E+W S +  LK   +   
Sbjct: 372 KAFKKDHPMDGYEKLCYEFLDYVDGLPLALEVFGNSLLDRSVEDWSSRLASLKDDNYSGK 431

Query: 374 QKV---LKVSYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
            K+   LK S+DGL+++EQ  IFLD ACFFKG D   V N  ++C +   I ++ L  K 
Sbjct: 432 NKIVNYLKESFDGLENQEQREIFLDIACFFKGEDACRVENIFESCGYYPGINLNILCEKY 491

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI- 486
           LV+I   K+ MH+LLQ+MG E+VR ES K+ G RSRLW   +   VL  N+ T    GI 
Sbjct: 492 LVSIVGGKLWMHNLLQQMGREVVRGESKKE-GARSRLWLHTEAIHVLKGNKGTDAVQGIF 550

Query: 487 -----------------NLDSLKELYL-----GGCSNL----------KRFPEISC---- 510
                            N+D+L+ L +      GC              ++P  S     
Sbjct: 551 LSLPHPEKVHLKKDPFSNMDNLRLLKIYNVEFSGCLEYLSDELSFLEWHKYPLKSLPSSF 610

Query: 511 ---NIEDLDLKETAIEELPSSIGN-LSRLVDLDLTNCS--------------------GL 546
               + +L+L E+ IE+L   I   L +L+ L+L++C                     G 
Sbjct: 611 EPDKLVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIPDFDKVPNLEQLILKGC 670

Query: 547 KSVSS--RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            S+S    + NL+SL   NLSGC KLEK+PE   +++ L  L+L     E++P+S++ LS
Sbjct: 671 TSLSEVPDIINLRSLTNFNLSGCSKLEKIPEIGEDMKQLRKLHLDGTAIEELPTSIEHLS 730

Query: 605 KLSDLRLQNCKRLQSLPELPCGS 627
            L+ L L++CK L SLP++ C S
Sbjct: 731 GLTLLDLRDCKNLLSLPDVFCDS 753



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 72/112 (64%), Gaps = 4/112 (3%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           + +P  INL SL    L GCS L++ PEI  +++ L    L  TAIEELP+SI +LS L 
Sbjct: 674 SEVPDIINLRSLTNFNLSGCSKLEKIPEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLT 733

Query: 537 DLDLTNCSGLKSVSSRLCN-LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
            LDL +C  L S+    C+ L SL+ LNLSGC  L+KLP+ +G+LE L+ L+
Sbjct: 734 LLDLRDCKNLLSLPDVFCDSLTSLQILNLSGCSNLDKLPDNLGSLECLQELD 785


>gi|356524164|ref|XP_003530702.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1248

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 252/708 (35%), Positives = 372/708 (52%), Gaps = 89/708 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R  F   L  +LC + I TF+DD+ L RG EI  +L  AI+ S+I+IV
Sbjct: 16  YDVFLSFRGDDTRSGFTGSLYKSLCDQGIHTFMDDEGLRRGEEIRHALFKAIQQSRIAIV 75

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLGWMG--- 126
           +FSE YASS +CL ELV ILE   K G++V PVFY V PS        Y  +L  +G   
Sbjct: 76  VFSENYASSTYCLEELVMILECIMKKGRLVWPVFYGVTPSYVRHQKGSYGKALDKLGERF 135

Query: 127 --------IFDIPTSESVLIEGN----------------VNDISKKLSDLFPSDNKDQLV 162
                    + +   E+  + G+                V ++S+K+ +  P    +  +
Sbjct: 136 KNDKEKLQKWKLALQEAANLSGSHFKLKHGYEHEVIQKIVEEVSRKI-NRSPLHVANYPI 194

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G+ES ++E+ S L  GS +  + VGI+GIGGIGKT IA A+Y+ I+  FEG  F+ +IR+
Sbjct: 195 GLESRVQEVNSLLDVGSNQGVSMVGIYGIGGIGKTAIACAVYNLIADQFEGQCFLGDIRE 254

Query: 222 ES-------------EKVG------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           +S             E VG      G  N      + +L R KVL++  D+  L+Q+  L
Sbjct: 255 KSKHGLVELQETILSEMVGEKSIKLGSTNRGKAVLKSKLQRKKVLLILDDVDRLEQLKAL 314

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G    F  GSR+I+TT D  LL+ H   R    +E K L   ++L LFS +AF  N  +
Sbjct: 315 AGDPSWFGHGSRIIVTTTDKHLLRVHGVERR---YEAKGLDDKEALELFSWHAFKSNEVS 371

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             ++++S   + Y+NG+PLAL+++GS L G +  EW++A++ ++R P  DIQ+ LKV YD
Sbjct: 372 PSYMDISKRAVLYSNGLPLALEIIGSNLNGKTMPEWQAALDTIERNPDEDIQEKLKVGYD 431

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNNK-ITM 440
           GL   E+ +FLD ACFF+G+D   V + L   R FS +  I  L+ KSL+ I     + M
Sbjct: 432 GLKRNEKEVFLDIACFFRGSDLKDVTSLLFQGRGFSPEYVIRVLIDKSLIKIDKYGFVRM 491

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSL--KELYL 496
           H+L++ MG EIV+QES  +PGKRSRLW  EDI  VL  +    T   I L S   KE+  
Sbjct: 492 HNLVENMGREIVKQESPSEPGKRSRLWLYEDIVDVLENDKGTDTIEVIMLHSPKNKEVQW 551

Query: 497 GGCSNLKRFPEIS-CNIEDLDLKETAIEELPSSIGNLS----------------RLVDLD 539
            G S LK+   +   +IE+       +  LP+S+  L                 RLV LD
Sbjct: 552 NG-SELKKMTNLKLLSIENAHFSRGPV-HLPNSLRVLKWWGYPSPSLPPEFDSRRLVMLD 609

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIP 597
           L+N   +     +    +SL  + L GC  +++ P+  G  NL+ L   N   K+  ++ 
Sbjct: 610 LSNSCNIMGKQLKFMKFESLSEMVLRGCRFIKQTPDMSGAQNLKKLCLDNC--KNLVEVH 667

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSN 642
            S+  L K++      C  L+ LP   +L     +  + C++L+ L N
Sbjct: 668 DSIGLLDKITWFTAVGCTNLRILPRSFKLTSLEHLSFKKCSNLQCLPN 715



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 83/197 (42%), Gaps = 29/197 (14%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
           LP    L SL+ L    CSNL+  P I     +++ LDL  TAIEELP S   L+ L  L
Sbjct: 690 LPRSFKLTSLEHLSFKKCSNLQCLPNILEEMKHVKKLDLCGTAIEELPFSFRKLTGLKYL 749

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEI---------------- 577
            L  C  L  +   +  L  L +L    C     L L K   ++                
Sbjct: 750 VLDKCKMLNQIPISILMLPKLEKLTAIKCGRYANLILGKSEGQVRLSSSESLRDVRLNYN 809

Query: 578 ----GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
                +  ++E+L L    F+ +P  + Q   L +L L NCK LQ +  +P     + A 
Sbjct: 810 DLAPASFPNVEFLVLTGSAFKVLPQCISQCRFLKNLVLDNCKELQEIRGVPPKIKYLSAI 869

Query: 633 HCTSLKTLSNSSTLLTR 649
           +CTSL   S S  L  R
Sbjct: 870 NCTSLSHESQSMLLNQR 886


>gi|356499336|ref|XP_003518497.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 746

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 212/538 (39%), Positives = 303/538 (56%), Gaps = 71/538 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D RH F+ HL   LC++ I+ F DDK L  G  ISP+LSSAIE SKI IV
Sbjct: 132 YDVFLSFRGEDTRHKFIGHLRKELCQKGIKVFSDDKDLRIGEGISPALSSAIEKSKILIV 191

Query: 75  IFSEGYASSRWCLNELVKILESKN----KYGQIVVPVFYLVDPSD-----AGYCPSL--- 122
           +FSE YA S WCL+ELVKILE          Q+V P+FY VDPSD       Y   +   
Sbjct: 192 VFSENYAESTWCLDELVKILECTKIIIRDKKQLVFPIFYHVDPSDIRHQKKSYGEHMLEH 251

Query: 123 ------------GWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                        W       ++          E+  IE   + + K ++   P      
Sbjct: 252 QKRFGKDSQRVQAWRSALSEASNFPGHHISTGYETEFIEKIADKVYKHIAP-NPLHTGQN 310

Query: 161 LVGVESIIKEIESQLLSGSTEFNTV---GIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
            +G+   ++E+ S LL       TV   G+WG+ G+GKT +A+A+Y+NI +HF+ + F+ 
Sbjct: 311 PIGLWPRMEEVMS-LLDMKPYDETVRMLGVWGLPGVGKTELATALYNNIVNHFDAASFLS 369

Query: 218 NIRDESEKVGGL---------------------ANIHLNFERRRLSRMKVLIVFYDLTDL 256
           N+R++S K+ GL                     AN  ++  +R+L   KVL+V  D+ D 
Sbjct: 370 NVREKSNKINGLEDLQKTLLSEMREELDTDLGCANKGMSEIKRKLEGKKVLLVLDDVDDK 429

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            +++ L G  D F  GSR+IITTRD  +L  H+   V ++++++EL  + SL LF  NAF
Sbjct: 430 DKLEKLAGGRDWFGSGSRIIITTRDKDVLIAHQ---VDNIYQMEELDKHHSLELFCWNAF 486

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE---EEWESAVNKLKRMPHMDI 373
            Q+HP  GF ++S   I  A G+PLAL+V+GS L  + E   E+W+ A+ + +R P   I
Sbjct: 487 KQSHPKTGFEDVSLRAIDVAKGLPLALKVIGSDLATLDEESLEDWKCALEEYERTPPERI 546

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            +VLK SYD L  + + +FLD ACFFKG  +  V N LD   F AK  I  LV KSL+TI
Sbjct: 547 LEVLKKSYDRLGSKPKQVFLDIACFFKGEKKEYVENVLDE-DFGAKSNIKVLVNKSLLTI 605

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD 489
            +  + MHDL+Q+MG +IVRQE+  +PG+ SR+W+ ED+  +L ++  +    GI LD
Sbjct: 606 EDGCLKMHDLIQDMGRDIVRQEA-PNPGECSRVWYHEDVIDILTDDLGSDKIQGIMLD 662



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/82 (62%), Positives = 61/82 (74%), Gaps = 1/82 (1%)

Query: 16 HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
          +DVFL FRG+DVR+ F+ HL   LC + I TF DD+ L  G  I+PSLS AIE SKI I+
Sbjct: 13 YDVFLCFRGEDVRYLFIGHLRKELCSKNINTFCDDEDLRMGEGIAPSLSKAIEESKILII 72

Query: 75 IFSEGYASSRWCLNELVKILES 96
          +FSE YAS  WCL+ELVKILES
Sbjct: 73 VFSENYASPPWCLDELVKILES 94


>gi|357499649|ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
 gi|355495128|gb|AES76331.1| Resistance protein PRG [Medicago truncatula]
          Length = 1256

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 237/713 (33%), Positives = 357/713 (50%), Gaps = 94/713 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R  F  +L  AL    I TFIDD+ L  G+EISPSL  AIE S+I I 
Sbjct: 18  YDVFLSFRGSDTRFGFTGNLYKALRDCGIHTFIDDRELQGGDEISPSLVKAIEESRIFIP 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS------------- 121
           +FS  YASS +CL+ELV I++  N  G +V+PVFY VDPS   +                
Sbjct: 78  VFSINYASSSFCLDELVHIIDCFNTKGCLVLPVFYGVDPSHIRHQTECFGEAIAKQEVKF 137

Query: 122 ----------LGWMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKD 159
                     L W    +   +            E  +I   V ++S K++   P    D
Sbjct: 138 QNQKDDMDRLLKWKCALNKAANFSGHHFNLGNEYEYEIITKIVKEVSNKINRT-PLHVAD 196

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG+ES + +I+S L  GS +    VGI+G+GG GKTT+A AIY+ I+  FE   F+ N
Sbjct: 197 YPVGIESRLLQIKSLLDVGSNDAVCLVGIYGMGGSGKTTLAQAIYNFIADQFECLCFLHN 256

Query: 219 IRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           +R+ S K G                   G  +  +   + RL   KVL++  D+ +LKQ+
Sbjct: 257 VREISAKHGLEDLQEKLLSKTVGLSVKFGHVSEGIPIIKERLRLKKVLLILDDVDELKQL 316

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L G  +    GSRV++TTRD  LL  H   R    +E+  L+  ++L L    AF  N
Sbjct: 317 KVLAGDPNWLGHGSRVVVTTRDKHLLACHGIERT---YELDGLNKEEALELLKWKAFKNN 373

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
              + +  + N  + YA+G+PLAL+V+GS L G  ++EW+S +++ +R+PH ++ K+LKV
Sbjct: 374 KVDSSYEHILNRAVTYASGLPLALEVVGSSLFGKHKDEWKSTLDRYERIPHKEVLKILKV 433

Query: 380 SYDGLDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
           S+D L+ +EQ++FLD AC F+G      +  L  ++ +  ++  ++ I + + K      
Sbjct: 434 SFDSLEKDEQSVFLDIACCFRGYILAEVEDILYAHYGECMKYHIRVLIEKCLIKIYRQCG 493

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS-- 490
              +T+HDL++EMG EIVRQES K+PGKRSRLW  +DI QVL EN  TS    I ++S  
Sbjct: 494 CTYVTLHDLIEEMGKEIVRQESPKEPGKRSRLWFHKDIVQVLEENLGTSKIEIIYMESPL 553

Query: 491 --------LKELYLGGCSNLKRF-----------PEISCNIEDLDLKETAIEELPSSIGN 531
                    K   L    NLK F             +  N+  L+ +    ++ PS    
Sbjct: 554 SKEEEVVEWKGDELKKMENLKTFIIKRGRFSKGLEHLPNNLRVLEWRSYPSQDSPSIFWQ 613

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLA 589
               +     +C     +   +    ++R L L  C  L ++    G  NLE+  +    
Sbjct: 614 KKLSICKLRESCFTSFELHDSIKKFVNMRELILDHCQCLIRIHNVSGLPNLETFSFQ--C 671

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
            K+   + +S+  L+KL  L  + C +L S P +   S   +   +CTSLK+ 
Sbjct: 672 CKNLITVHNSVGLLNKLKILNAKRCSKLTSFPPMKLTSLHELELSYCTSLKSF 724



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 31/190 (16%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           TS P  + L SL EL L  C++LK FPEI   I+++    L+ T IEELP S  NLS L 
Sbjct: 700 TSFPP-MKLTSLHELELSYCTSLKSFPEILGEIKNVTRILLRGTFIEELPYSFRNLSGLH 758

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK------------------------ 572
            L +     ++ +   +  + +L R+   GCL  +K                        
Sbjct: 759 RLLIWGSRNVR-LPFGILMMPNLARIEAYGCLLFQKDNDKLCSTTMSSCVQFLRCKLSVE 817

Query: 573 -LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            LP  +  + +++ L L+  +F  +P  +K+ + L  L L NCK LQ +  +P     + 
Sbjct: 818 FLPIVLSQITNVKDLVLSGSNFTILPECLKECNFLQSLELDNCKSLQEIRGIPPNLKHVS 877

Query: 631 ARHCTSLKTL 640
           A  C SL  L
Sbjct: 878 ALRCESLTYL 887


>gi|30696077|ref|NP_851172.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737797|dbj|BAF00837.1| hypothetical protein [Arabidopsis thaliana]
 gi|332008724|gb|AED96107.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1229

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 243/727 (33%), Positives = 355/727 (48%), Gaps = 118/727 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSS         +DVF SF G+DVR +F+SHL   L R+ I TFID+ + R + I+P
Sbjct: 1   MASSSSR-----SWTYDVFPSFSGEDVRKSFLSHLLKKLHRKSINTFIDNNIERSHAIAP 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L SAI  S ISIV+FS+ YASS WCLNELV+I +   +  QIV+P+FY VDPSD     
Sbjct: 56  DLLSAINNSMISIVVFSKKYASSTWCLNELVEIHKCYKELTQIVIPIFYEVDPSDVRKQT 115

Query: 117 ------------GYCPSLG--WMGIFDIPTS-----------ESVLIEGNVNDISKKLSD 151
                       G    +   W+   +   S           E+ +IE    D+  KL  
Sbjct: 116 REFGEFFKVTCVGKTEDVKQQWIEALEEVASIAGHDSKNWPNEANMIEHIAKDVLNKLIA 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
              S+    LVG+E+ +K ++S L   S E   VGI G  GIGKTTIA  +YS +SS F+
Sbjct: 176 TSSSNCFGDLVGIEAHLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQFD 235

Query: 212 GSYFMQNIRDESEKVG-----------------GLANIHLNFERRRLSRMKVLIVFYDLT 254
              F    R   +  G                  L    L   ++RL   KVLIV  D+ 
Sbjct: 236 YHVFGSFKRTNQDNYGMKLSWEEQFLSEILDQKDLKISQLGVVKQRLKHKKVLIVLDDVD 295

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           +L+ +  L+G+   F PGSR+I+TT+D  LLK+H+   + H++EV   S   +L +  R+
Sbjct: 296 NLELLKTLVGQTGWFGPGSRIIVTTQDRILLKSHK---IDHIYEVGYPSRKLALRILCRS 352

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR-MPHMDI 373
           AF +N P  GF++L+N V +    +PLAL ++GS LKG  +EEW   +  L+  +   +I
Sbjct: 353 AFDRNSPPDGFMQLANEVTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEI 412

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            K L+VSYD L    Q IFL  AC         +++ L     +A IG+  L  KSL+ I
Sbjct: 413 LKTLRVSYDRLHGNYQEIFLYIACLLNCCGVEYIISMLGD---NAIIGLKILAEKSLIHI 469

Query: 434 S--NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           S  +  + MH LLQ++G +IVR ES  +PGKR  L   EDI  V  +NT   T  GI+L+
Sbjct: 470 SPLDKTVEMHSLLQKLGRKIVRDESFGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLN 529

Query: 490 SLK--------ELYLGGCSNLK------------------------------------RF 505
           +L+        +    G  NL+                                    +F
Sbjct: 530 TLEINGTLSVDDKSFQGMHNLQFLKVFENWRRGSGEGILSLPQGLNSLPRKLRLLHWYKF 589

Query: 506 PEISC--------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
           P + C         + +L++  + +E L      L  L  +DL+    LK +   L    
Sbjct: 590 P-LRCMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIPD-LSYAV 647

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKR 616
           +L  ++L  C  L  LP  + NL+ L  L ++   + E +P+ +  L  L  L L++C +
Sbjct: 648 NLEEMDLCSCKSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQ 706

Query: 617 LQSLPEL 623
           L+S P++
Sbjct: 707 LRSFPQI 713



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT +NL+SL  L L GCS L  FP+IS NIE L L +TAIEE+PS I +   L  L +
Sbjct: 846 ALPTDVNLESLHTLDLSGCSKLTTFPKISRNIERLLLDDTAIEEVPSWIDDFFELTTLSM 905

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             C  L+++S+ +C LK +   N S C +L + 
Sbjct: 906 KGCKRLRNISTSICELKCIEVANFSDCERLTEF 938



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 28/158 (17%)

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           DL L E  ++E P+ +  ++ L  LDL  C  L +V S + +L  L  LN+  C  LE L
Sbjct: 790 DLSLSE-KLKEFPN-LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEAL 847

Query: 574 PEEIGNLESLEYLNLA---------------------EKDFEKIPSSMKQLSKLSDLRLQ 612
           P ++ NLESL  L+L+                     +   E++PS +    +L+ L ++
Sbjct: 848 PTDV-NLESLHTLDLSGCSKLTTFPKISRNIERLLLDDTAIEEVPSWIDDFFELTTLSMK 906

Query: 613 NCKRLQ----SLPELPCGSSIHARHCTSLKTLSNSSTL 646
            CKRL+    S+ EL C    +   C  L    ++S +
Sbjct: 907 GCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMV 944



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 25/140 (17%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            L SLK++ L    NLK  P++S   N+E++DL    ++  LPSS+ NL +L  L +++C
Sbjct: 622 QLGSLKKMDLSKSENLKEIPDLSYAVNLEEMDLCSCKSLVTLPSSVRNLDKLRVLRMSSC 681

Query: 544 SGLKSVSSRLCNLKSLRRL---------------------NLSGCLKLEKLPEEIGNLES 582
           S ++ + + L NL+SL  L                     NLSG    E+    I N+  
Sbjct: 682 SNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNLSGTAIDEESSLWIENMSR 740

Query: 583 LEYLNLAEKDFEKIPSSMKQ 602
           L +L       + +PS+ +Q
Sbjct: 741 LTHLRWDFCPLKSLPSNFRQ 760


>gi|297740948|emb|CBI31260.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 261/776 (33%), Positives = 372/776 (47%), Gaps = 153/776 (19%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           MAS  S+    P  K+DVFLSFRG+D    F  HL  AL       F DD K  +  EI+
Sbjct: 1   MASVDSTF--APQWKYDVFLSFRGEDTGKTFTDHLYTALDENGFYAFRDDEKHEKREEIA 58

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P   +AIE SKISI++FS+ YASSRWCL+EL  I++S  K G++V+PVFY VDPS+    
Sbjct: 59  PEFLTAIEESKISILVFSKNYASSRWCLDELETIIKSMKKPGRMVMPVFYHVDPSEVRDQ 118

Query: 117 -GYCPSL---------------GWMGIFDIPTS-----------ESVLIEGNVNDISKKL 149
            G C                   W       ++           ES LI+  + DI ++L
Sbjct: 119 IGSCEVFLSHERDAEETKEKVNRWRAALREASNLVGWRLHNHRYESQLIKEIITDILRRL 178

Query: 150 S-DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           + +L   D     VG+E  +K++ S +     +   +GI GI GIGKTTIA AIY+ IS 
Sbjct: 179 NCELLQVDYDT--VGMEFRLKKLLSLINLKLDKVLMIGINGISGIGKTTIAKAIYNKISY 236

Query: 209 HFEGSYFMQNIRDESEKVGGLANIHLNFER-------------RRLSRMKVLIVFYDLTD 255
           HF+ + F+ N+ + S         HLN  +              R    +VL+V  D+  
Sbjct: 237 HFQSTIFLTNVGENSR------GHHLNLPQFQQLLDDASIGTYGRTKNKRVLLVVDDVDR 290

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L Q++ L+   D F   SR+I TTRD  LL     +++   +E K L++ +++ LFS +A
Sbjct: 291 LSQVEYLVKLRDSFSLRSRIIFTTRDRHLLN---VAKLDASYESKGLTHEEAIHLFSWHA 347

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F Q  P   ++ L N V+ Y  G PLAL+VLGS L G +  EW+  ++KL++  H +I  
Sbjct: 348 FKQTFPKEDYVGLVNHVVGYVKGHPLALKVLGSSLFGKTITEWKCILHKLRKNTHGEIYN 407

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
            LKVS+DGL   EQ IFL   C  KG D+  V   LD+    ++ GI  L    L TISN
Sbjct: 408 ELKVSFDGLTPTEQEIFLKVVCLLKGKDEESVSTILDSLGLGSESGIQVLHDMCLATISN 467

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT--------------- 480
           NK+ MHDLLQ+MG +++ + +  +P KRSRL   +D+Y  L  NT               
Sbjct: 468 NKLYMHDLLQQMGQKLIDENNPHEPSKRSRLQDSKDVYPRLTRNTGTEEIQKIQFSSAGF 527

Query: 481 ---------------SLPTGINLDSLKELYLGGC-SNLKR-----FPEISCN-----IED 514
                          SLP     DSL  ++L    SN+++     +P ++ N     I+ 
Sbjct: 528 LKMPKLYSLMHLPLKSLPPNFPGDSL--IFLDWSRSNIRQLWKDEYPRLTRNTGTEAIQK 585

Query: 515 L-----------------------DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS- 550
           L                       DL  + I +L     +L  L  ++L+ C  L  +S 
Sbjct: 586 LLSPMHLPLKSLPPNFPGDSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKISK 645

Query: 551 ----------------------SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
                                 S +C LK L  L  SGC  LE  PE    +E+L+ L+L
Sbjct: 646 FPSMPALKILRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLKELHL 705

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR--HCTSLKTLSN 642
            E   +++PSS+  L+ L  L L++CK L SLP     +SI  R   CT L  L +
Sbjct: 706 DETAIKELPSSIYHLTALEFLNLEHCKNLVSLP----SASIKYRVCRCTPLHLLED 757


>gi|9758205|dbj|BAB08679.1| disease resistance protein; strong similarity to TMV resistance
           protein N [Arabidopsis thaliana]
          Length = 1239

 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 243/727 (33%), Positives = 355/727 (48%), Gaps = 118/727 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSS         +DVF SF G+DVR +F+SHL   L R+ I TFID+ + R + I+P
Sbjct: 1   MASSSSR-----SWTYDVFPSFSGEDVRKSFLSHLLKKLHRKSINTFIDNNIERSHAIAP 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L SAI  S ISIV+FS+ YASS WCLNELV+I +   +  QIV+P+FY VDPSD     
Sbjct: 56  DLLSAINNSMISIVVFSKKYASSTWCLNELVEIHKCYKELTQIVIPIFYEVDPSDVRKQT 115

Query: 117 ------------GYCPSLG--WMGIFDIPTS-----------ESVLIEGNVNDISKKLSD 151
                       G    +   W+   +   S           E+ +IE    D+  KL  
Sbjct: 116 REFGEFFKVTCVGKTEDVKQQWIEALEEVASIAGHDSKNWPNEANMIEHIAKDVLNKLIA 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
              S+    LVG+E+ +K ++S L   S E   VGI G  GIGKTTIA  +YS +SS F+
Sbjct: 176 TSSSNCFGDLVGIEAHLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQFD 235

Query: 212 GSYFMQNIRDESEKVG-----------------GLANIHLNFERRRLSRMKVLIVFYDLT 254
              F    R   +  G                  L    L   ++RL   KVLIV  D+ 
Sbjct: 236 YHVFGSFKRTNQDNYGMKLSWEEQFLSEILDQKDLKISQLGVVKQRLKHKKVLIVLDDVD 295

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           +L+ +  L+G+   F PGSR+I+TT+D  LLK+H+   + H++EV   S   +L +  R+
Sbjct: 296 NLELLKTLVGQTGWFGPGSRIIVTTQDRILLKSHK---IDHIYEVGYPSRKLALRILCRS 352

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR-MPHMDI 373
           AF +N P  GF++L+N V +    +PLAL ++GS LKG  +EEW   +  L+  +   +I
Sbjct: 353 AFDRNSPPDGFMQLANEVTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEI 412

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            K L+VSYD L    Q IFL  AC         +++ L     +A IG+  L  KSL+ I
Sbjct: 413 LKTLRVSYDRLHGNYQEIFLYIACLLNCCGVEYIISMLGD---NAIIGLKILAEKSLIHI 469

Query: 434 S--NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           S  +  + MH LLQ++G +IVR ES  +PGKR  L   EDI  V  +NT   T  GI+L+
Sbjct: 470 SPLDKTVEMHSLLQKLGRKIVRDESFGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLN 529

Query: 490 SLK--------ELYLGGCSNLK------------------------------------RF 505
           +L+        +    G  NL+                                    +F
Sbjct: 530 TLEINGTLSVDDKSFQGMHNLQFLKVFENWRRGSGEGILSLPQGLNSLPRKLRLLHWYKF 589

Query: 506 PEISC--------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
           P + C         + +L++  + +E L      L  L  +DL+    LK +   L    
Sbjct: 590 P-LRCMPSNFKAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIPD-LSYAV 647

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKR 616
           +L  ++L  C  L  LP  + NL+ L  L ++   + E +P+ +  L  L  L L++C +
Sbjct: 648 NLEEMDLCSCKSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQ 706

Query: 617 LQSLPEL 623
           L+S P++
Sbjct: 707 LRSFPQI 713



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT +NL+SL  L L GCS L  FP+IS NIE L L +TAIEE+PS I +   L  L +
Sbjct: 846 ALPTDVNLESLHTLDLSGCSKLTTFPKISRNIERLLLDDTAIEEVPSWIDDFFELTTLSM 905

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             C  L+++S+ +C LK +   N S C +L + 
Sbjct: 906 KGCKRLRNISTSICELKCIEVANFSDCERLTEF 938



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 28/158 (17%)

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           DL L E  ++E P+ +  ++ L  LDL  C  L +V S + +L  L  LN+  C  LE L
Sbjct: 790 DLSLSE-KLKEFPN-LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEAL 847

Query: 574 PEEIGNLESLEYLNLA---------------------EKDFEKIPSSMKQLSKLSDLRLQ 612
           P ++ NLESL  L+L+                     +   E++PS +    +L+ L ++
Sbjct: 848 PTDV-NLESLHTLDLSGCSKLTTFPKISRNIERLLLDDTAIEEVPSWIDDFFELTTLSMK 906

Query: 613 NCKRLQ----SLPELPCGSSIHARHCTSLKTLSNSSTL 646
            CKRL+    S+ EL C    +   C  L    ++S +
Sbjct: 907 GCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMV 944



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 25/140 (17%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            L SLK++ L    NLK  P++S   N+E++DL    ++  LPSS+ NL +L  L +++C
Sbjct: 622 QLGSLKKMDLSKSENLKEIPDLSYAVNLEEMDLCSCKSLVTLPSSVRNLDKLRVLRMSSC 681

Query: 544 SGLKSVSSRLCNLKSLRRL---------------------NLSGCLKLEKLPEEIGNLES 582
           S ++ + + L NL+SL  L                     NLSG    E+    I N+  
Sbjct: 682 SNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNLSGTAIDEESSLWIENMSR 740

Query: 583 LEYLNLAEKDFEKIPSSMKQ 602
           L +L       + +PS+ +Q
Sbjct: 741 LTHLRWDFCPLKSLPSNFRQ 760


>gi|105922395|gb|ABF81414.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1282

 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 251/780 (32%), Positives = 381/780 (48%), Gaps = 160/780 (20%)

Query: 22  FRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGY 80
           FRGKD R NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+ S++IFS+ Y
Sbjct: 99  FRGKDTRDNFTSHLYSNLKQRGIDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSKDY 158

Query: 81  ASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------------- 118
           ASS WCL+ELVKI++   + GQ V+PVFY VDPS+                         
Sbjct: 159 ASSPWCLDELVKIVQCMKEMGQSVLPVFYDVDPSEVAEQKGQYEKAFVEHEQNFKENLEK 218

Query: 119 ------CPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                 C S      GW  + +   SES+ I   V  IS KLS   P+ +K +LVG++S 
Sbjct: 219 VQNWKDCLSTVANLSGW-DVRNRNESESIKI--IVEYISYKLSVTLPTISK-KLVGIDSR 274

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE-SEKV 226
           ++ +   +     +   +GI G+GGIGKTT+A  +Y  I   FEGS F+ N+R+  +EK 
Sbjct: 275 VEVLNGYIREEVGKAIFIGICGMGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKD 334

Query: 227 GGLANIHLNFERRRLSRMKVLIVFY-----------------------------DLTDLK 257
           G          RRRL    +  +                               D+ D +
Sbjct: 335 G----------RRRLQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKE 384

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++ L      F PGSR+IIT+RD +++  +  +R+   +E K+L+ +D+L LFS+ AF 
Sbjct: 385 QLEFLAEEPGWFGPGSRIIITSRDKKVVTGNNNNRI---YEAKKLNDDDALMLFSQKAFK 441

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
            +HP   F+ELS  V+ YANG+PLAL+V+GS+L   S  EW  A+N++  +P   I  VL
Sbjct: 442 NDHPTEDFVELSKQVVGYANGLPLALEVIGSFLYDRSIPEWRGAINRMNEIPDGRIIDVL 501

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           +VS+DGL + ++ IFLD ACF KG     +   L +  F A IGI  L+ +SL+++S ++
Sbjct: 502 RVSFDGLHESDKKIFLDIACFLKGFKIDRITRILQSRGFHAGIGIPVLIERSLISVSRDQ 561

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----PTGINLDSLKE 493
           + MH+LLQ MG EIVR ES ++PG+RSRLW  ED+   L +NT          ++  +KE
Sbjct: 562 VWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEKIEAIFFDMPGIKE 621

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGN--------------------LS 533
                  N+K F ++S  +  L +    + E P ++ N                    + 
Sbjct: 622 AQW----NMKAFSKMS-RLRLLKIDNVQLSEGPENLSNKLLFLEWHSYPSKSLPAGLQVD 676

Query: 534 RLVDLDLTNCS------GLKSV----------------SSRLCNLKSLRRLNLSGCLKLE 571
            LV+L + N +      G KS                 +     + +L  L L GC  L 
Sbjct: 677 ELVELHMANSNLDQLWYGCKSAFNLKVINLSNSLHLTKTPDFTGIPNLESLILEGCTSLS 736

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL-------- 623
           ++   +G  + L+Y+NL + +  +I  S  ++  L    L  C +L+  P++        
Sbjct: 737 EVHPSLGYHKKLQYVNLMDCESVRILPSNLEMESLKVCILDGCSKLEKFPDIVGNMNCLM 796

Query: 624 ----------PCGSSIH---------ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
                        SSIH          + C +LK++ +S   L +S K  D+F  S   N
Sbjct: 797 VLRLDGTGIEELSSSIHHLIGLEVLSMKTCKNLKSIPSSIGCL-KSLKKLDLFGCSEFEN 855



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 67/106 (63%), Gaps = 3/106 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GCS L++FP+I  N+     L L  T IEEL SSI +L  L  L
Sbjct: 762 LPSNLEMESLKVCILDGCSKLEKFPDIVGNMNCLMVLRLDGTGIEELSSSIHHLIGLEVL 821

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            +  C  LKS+ S +  LKSL++L+L GC + E +PE +G +ESLE
Sbjct: 822 SMKTCKNLKSIPSSIGCLKSLKKLDLFGCSEFENIPENLGKVESLE 867


>gi|262316877|emb|CAZ44326.1| putative disease resistance protein [Raphanus sativus]
          Length = 1040

 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 246/742 (33%), Positives = 365/742 (49%), Gaps = 113/742 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F++HL        I  F D  + RG  I+P+L+ AI  S+ISIV
Sbjct: 115 RYRVFTSFHGPDVRKTFLTHLRKQFNCNGISMFDDQGIERGQTIAPALTQAIRESRISIV 174

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG----------------- 117
           + ++ YASSRWCL+EL+ IL+ K + GQIV+ +FY VDPSD                   
Sbjct: 175 VLTKHYASSRWCLDELLGILKCKEEMGQIVMTIFYGVDPSDVRKQTGDFGKVFKETCRGK 234

Query: 118 -------YCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  +  SL  +G      F I   ES +IE    D+S KL+     D +D +VG+E
Sbjct: 235 TEEERRRWSQSLTDVGNIAGEHFLIWDKESEMIEKIARDVSNKLNTTISRDFED-MVGIE 293

Query: 166 SIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR---- 220
           + + +++S L L        VGI G  GIGKTTIA A++S +SS F  + FM+N+R    
Sbjct: 294 AHLDKMQSLLHLHDEDGAMFVGICGPAGIGKTTIARALHSRLSSSFHLTCFMENLRGSCN 353

Query: 221 ---DE-----------SEKV---GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE             K+    G+   HL     RL   KVLI+  D+ DL+Q++ L 
Sbjct: 354 SGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLQQLEALA 413

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
              + F PGSRVI+TT D +LL+ H    + + + V   +   +  +F R AF Q     
Sbjct: 414 DETNWFGPGSRVIVTTEDQELLEQHD---INNTYNVDFPTQVVARQIFCRFAFRQLSAPH 470

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF +L + VIK  + +PL L+V+GS L+    ++WE  + +L+      I  VL+V Y+ 
Sbjct: 471 GFEKLVDRVIKLCSNLPLGLRVMGSSLRRKKIDDWEGILQRLENSFDQKIDAVLRVGYNS 530

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHD 442
           L  ++Q +FL  ACFF   D   V   L       ++G+  LV KSL+ IS    I MH 
Sbjct: 531 LHKDDQFLFLLIACFFNYKDDDHVKAMLVDSNLDVRLGLKNLVYKSLIQISAEGTIVMHK 590

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNL 502
           LLQ++G E V    +++P KR  L     I  VL  ++ L       +LK++ L G  +L
Sbjct: 591 LLQQVGREAVH---LQEPRKRQILIDAHQICDVLENDSPLT------NLKKMDLSGSLSL 641

Query: 503 KRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
           K  P++S   +++ L+L    ++ E+PSSIG+L +L +L++  C  ++ V   L NL SL
Sbjct: 642 KEVPDLSNATSLKRLNLTGCWSLVEIPSSIGDLHKLEELEMNLCVSVE-VFPTLLNLASL 700

Query: 560 RRLNLSGCLKLEKLPEEIGNLESL--------------------------------EYLN 587
             L + GC +L K+P+   N++SL                                  L 
Sbjct: 701 ESLRMVGCWQLSKIPDLPTNIKSLVIGETMLQEFPESVRLWSHLHSLNIYGSVLTVRLLE 760

Query: 588 LAEKDF------EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
              ++F      E+IP  +K  + L  L +  C +L SLPELP     +   +C SL+T+
Sbjct: 761 TTSQEFSLAATVERIPDWIKDFNGLRFLYIAGCTKLGSLPELPPSLRKLIVDNCESLETV 820

Query: 641 SNSSTLLTRSSKHWDIFNFSNC 662
              S   T      D   F NC
Sbjct: 821 CFPSDTPTT-----DYLYFPNC 837


>gi|297804200|ref|XP_002869984.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315820|gb|EFH46243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1046

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 241/711 (33%), Positives = 353/711 (49%), Gaps = 119/711 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           + DVF+SFRG D R++F S+L   L R+ I+TF D KL RG +IS      IE SK+SIV
Sbjct: 16  QFDVFVSFRGADTRNSFTSYLVQFLQRKGIDTFFDGKLRRGKDISVVFDR-IEQSKMSIV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           +FSE YA+S WCL EL KI++ + K+G  V+PVFY V  SD                   
Sbjct: 75  VFSENYANSTWCLEELWKIIQCREKFGHGVLPVFYKVRKSDVENQKGTFGVPFLSPKESF 134

Query: 117 -GYCPSLG-WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
            G    +G W     I ++           ES  +E    +  + L+DL P +      G
Sbjct: 135 KGDGQKVGAWKEALKIASNILGYVLPEERPESEFVEKIAKETFRMLNDLSPCE-LSGFPG 193

Query: 164 VESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           +ES  KE+E  L+  +     T+G+ G+ GIGKTT+A ++Y      F+G  F+++I +E
Sbjct: 194 IESRSKELEELLMFDNKNCIRTIGVLGMTGIGKTTVADSVYKRNYRQFDGYCFLEDIENE 253

Query: 223 SEKVGGLANIHL----------NFERRRLSRMK-------VLIVFYDLTDLKQIDLLIGR 265
           S++  GL ++H           N + R   R+K       + IV  ++T+  QI++LIG 
Sbjct: 254 SKR-HGLHHLHQKLLCKLLDEENVDIRAHGRLKDFLRNKKLFIVLDNVTEENQIEVLIGE 312

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN-HPAAG 324
            + +  GSR++ITTRD +LL+N+  +    ++ V  L+  +++ LF  +AF    +P   
Sbjct: 313 QEMYRKGSRIVITTRDKKLLQNNADA----IYVVPRLNDREAMELFCLDAFSDKLYPTEE 368

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           FL+LSN  + YA G PLAL++LGS L+      W     +L  MP  +IQKVLK+SY+ L
Sbjct: 369 FLDLSNNFVYYAKGHPLALKLLGSGLRQKERTYWVEKWERLMVMPDKEIQKVLKMSYEAL 428

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLL 444
           DDE+++IFLD ACFF+     LV + L +        +  L  K LVT S N++ MHDL+
Sbjct: 429 DDEQKSIFLDIACFFRSEKADLVSSILKSDHV-----MRELEDKCLVTKSYNRLEMHDLM 483

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI--NLDSLKELYLGG-- 498
             MG EI  + SIK  GKRSRLW+ +DI  VL + T      GI  N+ +++ + L    
Sbjct: 484 HAMGKEIGYESSIKRAGKRSRLWNHKDIRNVLEQKTGTECVRGIFFNMSNVERIKLSPDV 543

Query: 499 ---CSNLK--RFPEISCN------------------------------------------ 511
               SNLK  +F    C+                                          
Sbjct: 544 FMRMSNLKFLKFHNSHCSQWCDNDHKIQFSKELDHFPDELVYLHWQGYPYEYLPSEFNPE 603

Query: 512 -IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
            + DL L+ + I++L         L  +DL+    L+S+S  L   K+L RL+L GC  L
Sbjct: 604 ELVDLSLRYSYIKQLWEDDKKTENLRWVDLSQSKDLRSLSG-LSKAKNLERLDLEGCTSL 662

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
             L   I  +  L YLNL +    E +P  +  L  L  L L  C  LQ  
Sbjct: 663 VLLGSSIEKMNKLIYLNLRDCTSLESLPEGI-NLKSLKTLILSGCSNLQEF 712



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 101/191 (52%), Gaps = 23/191 (12%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP GINL SLK L L GCSNL+ F  IS NIE L L+ +AIE++   I +L  L+ L+L
Sbjct: 688 SLPEGINLKSLKTLILSGCSNLQEFQIISDNIESLYLEGSAIEQVVEHIESLRNLILLNL 747

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK + + L  LKSL+ L LSGC  LE LP     +E LE L +     ++ P ++
Sbjct: 748 KNCRRLKYLPNDLYKLKSLQELILSGCSALESLPPIKEEMECLEILLMDGTSIKQTPETI 807

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIH---------ARHCTSLKTLSNSSTLLTRSS 651
                LS+L++ +           CGSSI          A  C SL+ ++   TL   + 
Sbjct: 808 ----CLSNLKMFSF----------CGSSIEDSTGLHYVDAHGCVSLEKVAEPVTLPLVTD 853

Query: 652 KHWDIFNFSNC 662
           +    F F+NC
Sbjct: 854 RMHTTFIFTNC 864



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 26/164 (15%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDL 538
           LP+  N + L +L L   S +K+  E     E+L   DL ++      S +     L  L
Sbjct: 596 LPSEFNPEELVDLSLRY-SYIKQLWEDDKKTENLRWVDLSQSKDLRSLSGLSKAKNLERL 654

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL------NLAE-- 590
           DL  C+ L  + S +  +  L  LNL  C  LE LPE I NL+SL+ L      NL E  
Sbjct: 655 DLEGCTSLVLLGSSIEKMNKLIYLNLRDCTSLESLPEGI-NLKSLKTLILSGCSNLQEFQ 713

Query: 591 -------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                           E++   ++ L  L  L L+NC+RL+ LP
Sbjct: 714 IISDNIESLYLEGSAIEQVVEHIESLRNLILLNLKNCRRLKYLP 757


>gi|38489219|gb|AAR21295.1| bacterial spot disease resistance protein 4 [Solanum lycopersicum]
          Length = 1146

 Score =  311 bits (797), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 239/729 (32%), Positives = 365/729 (50%), Gaps = 116/729 (15%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P  K+ VFLSFRG+D R  F  HL   L    I TF DDK L  G+ I   L  AIE S+
Sbjct: 16  PRWKYVVFLSFRGEDTRKTFTGHLYEGLRNRGINTFQDDKRLEHGDSIPKELLRAIEDSQ 75

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPSDAGY-CPSLG----- 123
           ++++IFS+ YA+SRWCLNELVKI+E K +  GQ V+P+FY VDPS   Y   S G     
Sbjct: 76  VALIIFSKNYATSRWCLNELVKIMECKEEENGQTVIPIFYNVDPSHVRYQTESFGAAFAK 135

Query: 124 -----------------W---------MGIFDIPTS-ESVLIEGNVNDISKKL-SDLFPS 155
                            W         +  +DI    ES  I+  V+ IS K  ++ +  
Sbjct: 136 HESKYKDDVEGMQKVQRWRTALTAAANLKGYDIRNGIESENIQQIVDCISSKFCTNAYSL 195

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
                +VG+ + +++++S+L     +   +GIWGIGG+GKT IA AI+  +S  FE S F
Sbjct: 196 SFLQDIVGINAHLEKLKSKLQIEINDVRILGIWGIGGVGKTRIAKAIFDTLSYQFEASCF 255

Query: 216 MQNIRD--ESEKVGGLANIHLNFERR------------------RLSRMKVLIVFYDLTD 255
           + ++++  +  K+  L NI L+   R                  RL  +KVLIV  D+  
Sbjct: 256 LADVKEFAKKNKLHSLQNILLSELLRKKNDYVYNKYDGKCMIPNRLCSLKVLIVLDDIDH 315

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
             Q++ L G +  F  GSRVI+TTR+  L++         ++EV  L  ++++ LF+ +A
Sbjct: 316 GDQMEYLAGDICWFGNGSRVIVTTRNKHLIEKDDA-----IYEVSTLPDHEAMQLFNMHA 370

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F +  P   F EL+  ++ +A G+PLAL+V G  L   +   W+  V ++K+  + +I +
Sbjct: 371 FKKEVPNEDFKELALEIVNHAKGLPLALKVWGCLLHKKNLSLWKITVEQIKKDSNSEIVE 430

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS- 434
            LK+SYDGL+ EEQ IFLD ACFF+G  +  VM  L +C F A+ G+  L+ KSLV IS 
Sbjct: 431 QLKISYDGLESEEQEIFLDIACFFRGEKRKEVMQILKSCDFGAEYGLDVLINKSLVFISE 490

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLK 492
           N++I MHDL+++MG  +V+ + ++   KRSR+W  ED  +V+ + T   T   I     +
Sbjct: 491 NDRIEMHDLIRDMGRYVVKMQKLQ--KKRSRIWDVEDFKEVMIDYTGTMTVEAIWFSCFE 548

Query: 493 ELYLG--GCSNLKRF------------------------------------------PEI 508
           E+         +KR                                             +
Sbjct: 549 EVRFNKEAMKKMKRLRILHIFDGFVKFFSSPPSSNSNDSEEEDDSYDLVVDHHDDSIEYL 608

Query: 509 SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
           S N+  L     + + LP +     +LV L+L   S L  +  +  +L SLR+L+LS   
Sbjct: 609 SNNLRWLVWNHYSWKSLPENFKP-EKLVHLEL-RWSSLHYLWKKTEHLPSLRKLDLSLSK 666

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
            L + P+  G + +LEYLNL      E++  S+    KL +L L  C +L+  P +   S
Sbjct: 667 SLVQTPDFTG-MPNLEYLNLEYCSKLEEVHYSLAYCEKLIELNLSWCTKLRRFPYINMES 725

Query: 628 --SIHARHC 634
             S+  ++C
Sbjct: 726 LESLDLQYC 734



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 3/129 (2%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSRLVDLDLTN 542
           IN++SL+ L L  C  +  FPEI   ++   +     T I ELPSS+   + L +LDL+ 
Sbjct: 721 INMESLESLDLQYCYGIMVFPEIIGTMKPELMILSANTMITELPSSLQYPTHLTELDLSG 780

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
              L+++ S +  LK L +LN+S CL L+ LPEEIG+LE+LE L+ +     + PSS+ +
Sbjct: 781 MENLEALPSSIVKLKDLVKLNVSYCLTLKSLPEEIGDLENLEELDASRTLISQPPSSIVR 840

Query: 603 LSKLSDLRL 611
           L+KL  L+L
Sbjct: 841 LNKLKSLKL 849



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 18/158 (11%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
           +LP+ I  L  L +L +  C  LK  PE      N+E+LD   T I + PSSI  L++L 
Sbjct: 786 ALPSSIVKLKDLVKLNVSYCLTLKSLPEEIGDLENLEELDASRTLISQPPSSIVRLNKLK 845

Query: 537 DLDLTN--------CSGLKSVSSRLCNLKSLRRLNLSGCLKLE--KLPEEIGNLESLEYL 586
            L L          C     V++ L +L+ L      G    E  ++PE+IG L SL+ L
Sbjct: 846 SLKLMKRNTLTDDVCFVFPPVNNGLLSLEILEL----GSSNFEDGRIPEDIGCLSSLKEL 901

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            L   +F  +P S+ QL  L  L +++C+ L SLPE P
Sbjct: 902 RLEGDNFNHLPQSIAQLGALRFLYIKDCRSLTSLPEFP 939



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 88/161 (54%), Gaps = 9/161 (5%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           +L SL++L L    +L + P+ +   N+E L+L+  + +EE+  S+    +L++L+L+ C
Sbjct: 653 HLPSLRKLDLSLSKSLVQTPDFTGMPNLEYLNLEYCSKLEEVHYSLAYCEKLIELNLSWC 712

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           + L+       N++SL  L+L  C  +   PE IG ++    +  A     ++PSS++  
Sbjct: 713 TKLRRFP--YINMESLESLDLQYCYGIMVFPEIIGTMKPELMILSANTMITELPSSLQYP 770

Query: 604 SKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTL 640
           + L++L L   + L++LP    +L     ++  +C +LK+L
Sbjct: 771 THLTELDLSGMENLEALPSSIVKLKDLVKLNVSYCLTLKSL 811


>gi|356559367|ref|XP_003547971.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1047

 Score =  311 bits (797), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 247/706 (34%), Positives = 360/706 (50%), Gaps = 107/706 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R++F  +L   L    I TFIDD +  +G++I+ +L  AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRYSFTGNLYNVLRERGIHTFIDDDEFQKGDQITSALEEAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSD------------AGYCPS 121
           + SE YASS +CLNEL  IL  +K K   +V+PVFY+VDPSD            A +   
Sbjct: 68  VLSENYASSSFCLNELTHILNFTKGKNDLLVLPVFYIVDPSDVRHHRGSFGEALANHEKK 127

Query: 122 LGWMGIFDIPTSESVL-----IEGN-------------VNDISKKLSDLFPS---DNKDQ 160
           L    + ++ T +  L     I G+             + +I + +S  F        D 
Sbjct: 128 LNSDNMENLETWKMALHQVSNISGHHFQHDGNKYEYKFIKEIVESVSSKFNHALLQVPDV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG+ES + E++S L  GS +  + VGI G+GG+GKTT+A A+Y++I+ HFE S F++N+
Sbjct: 188 LVGLESPVLEVKSLLDVGSDDVVHMVGIHGLGGVGKTTLAVAVYNSIAGHFEASCFLENV 247

Query: 220 RDESEKVG-------------GLANIHLNFER-------RRLSRMKVLIVFYDLTDLKQI 259
           R+ S K G             G   I L   R        +L + KVL++  D+ + K +
Sbjct: 248 RETSNKKGLQHLQSILLSKTVGEKKIKLTNWREGIPIIKHKLKQKKVLLILDDVDEHKHL 307

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-Q 318
             +IG  D F  GSRVIITTR+  LL  H    V   ++V+EL+   +L L ++ AF  +
Sbjct: 308 QAIIGSPDWFGCGSRVIITTRNEHLLALHN---VKITYKVRELNEKHALQLLTQKAFELE 364

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
               + + ++ N  + YA+G+PLAL+V+GS L G S +EWESA+N  +R+P   I  +LK
Sbjct: 365 KEVDSSYNDILNRALIYASGLPLALEVIGSNLFGKSIKEWESALNGYERIPDKSIYMILK 424

Query: 379 VSYDGLDDEEQNIFLDTACFFK----GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
           VSYD L+++E++IFLD AC FK    G  Q ++      C    K  I  LV KSL+ I 
Sbjct: 425 VSYDALNEDEKSIFLDIACCFKDYELGELQDILYAHYGRC---MKYHIGVLVKKSLINIH 481

Query: 435 NN----KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGI 486
            +     + +HDL+++MG EIVR+ES  +PGKRSRLW  EDI QVL EN          +
Sbjct: 482 GSWDYKVMRLHDLIEDMGKEIVRRESPTEPGKRSRLWSHEDINQVLQENKGTSKIEIICM 541

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG- 545
           N  S  E         K+      N++ L +K     + P  + N  R+  L+   C   
Sbjct: 542 NFSSFGEEVEWDGDAFKKMK----NLKTLIIKSDCFTKGPKYLPNTLRV--LEWKRCPSR 595

Query: 546 -----LKSVSSRLCNLK------------------SLRRLNLSGCLKLEKLPEEIGNLES 582
                       +C L+                  +L  LNL  C  L ++P ++  L  
Sbjct: 596 DWPHNFNPKQLAICKLRHSSFTSLELAPLFEKRFVNLTILNLDKCDSLTEIP-DVSCLSK 654

Query: 583 LEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
           LE L+ A  ++   I  S+  L KL  L    C  L+S P L   S
Sbjct: 655 LEKLSFARCRNLFTIHYSVGLLEKLKILYAGGCPELKSFPPLKLTS 700



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 41/186 (22%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLSR 534
           E  S P  + L SL++  L GC NL+ FPEI   +E+   LDL E  I+E   S  NL+R
Sbjct: 689 ELKSFPP-LKLTSLEQFELSGCHNLESFPEILGKMENITVLDLDECRIKEFRPSFRNLTR 747

Query: 535 LVDLDL----TNCSGLKSVS--SRLCNLKSLRRLNLSGCLKLEKLPEEI--------GNL 580
           L +L L        G  + +  S +C +  L R+  +  L+   LP+++         ++
Sbjct: 748 LQELYLGQETYRLRGFDAATFISNICMMPELARVEATQ-LQWRLLPDDVLKLSSVVCSSM 806

Query: 581 ESLEY----------------------LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           + LE+                      LNL+   F  IP  +K    L+ L L  C RLQ
Sbjct: 807 QHLEFIGCDLSDELLWLFLSCFVNVKNLNLSASKFTVIPECIKDCRFLTTLTLDYCDRLQ 866

Query: 619 SLPELP 624
            +  +P
Sbjct: 867 EIRGIP 872



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 6/131 (4%)

Query: 494 LYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L L  C +L   P++SC   +E L       +  +  S+G L +L  L    C  LKS  
Sbjct: 635 LNLDKCDSLTEIPDVSCLSKLEKLSFARCRNLFTIHYSVGLLEKLKILYAGGCPELKSFP 694

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
                L SL +  LSGC  LE  PE +G +E++  L+L E   ++   S + L++L +L 
Sbjct: 695 P--LKLTSLEQFELSGCHNLESFPEILGKMENITVLDLDECRIKEFRPSFRNLTRLQELY 752

Query: 611 L-QNCKRLQSL 620
           L Q   RL+  
Sbjct: 753 LGQETYRLRGF 763


>gi|357518005|ref|XP_003629291.1| Resistance protein [Medicago truncatula]
 gi|355523313|gb|AET03767.1| Resistance protein [Medicago truncatula]
          Length = 1039

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 259/747 (34%), Positives = 373/747 (49%), Gaps = 156/747 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+ F  +L  AL  + I TFIDD+ L RG+EI+PSL  AIE S+I+I+
Sbjct: 20  YDVFLSFRGLDTRYGFTGNLYKALYDKGIHTFIDDEELQRGHEITPSLLEAIEESRIAII 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSLGWMG--- 126
           + S+ YASS +CL+ELVKIL+     G++V P+FY VDPSD       Y  +L  +G   
Sbjct: 80  VLSKNYASSSFCLHELVKILDCIKGKGRLVWPIFYDVDPSDVRKQTGSYGEALAMLGERF 139

Query: 127 ---------------------IFDIPTS-ESVLIEGNVNDISKKLSDL-FPSDNKDQLVG 163
                                 F I    E   I   V  +SKK++ +  P    D  VG
Sbjct: 140 NDNNLQIWKNALQQVANLSGWHFKIGDGYEYEFIGKIVEHVSKKMNRVALPV--ADYPVG 197

Query: 164 VESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           +E  + EI S L  GS  E N +GI G GGIGKTT+A A+Y+ I+ HFE   F++N+R+ 
Sbjct: 198 LEPQVLEINSLLDIGSDDEVNMIGIHGSGGIGKTTLALAVYNLIADHFEALCFLENVREN 257

Query: 223 SEKVG-------------GLANIHL-------NFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           S K G             G   I L       +  + RL + KVL++  D+  ++Q++ L
Sbjct: 258 SNKHGLQHLQKILLSETLGEKKIKLTSVKQGISIIKHRLQQKKVLLILDDVDKIEQLEAL 317

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           +G       GSRVIITTRD  LL +H   R    +EV  L+  D+L L +  AF      
Sbjct: 318 VGGFYWLGSGSRVIITTRDKHLLSSHGVKRT---YEVNVLNEKDALRLLTWKAFKTEVFH 374

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             + ++    + YA+G+PLAL V+GS L G + +EWESA+++ + +P+ +IQ +LKVS+D
Sbjct: 375 PSYFDVLKRAVGYASGLPLALIVIGSNLFGKNIQEWESALHRYEIIPNKEIQNILKVSFD 434

Query: 383 GLDDEEQNIFLDTACFFKG------NDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
            L+++E+++FLD AC + G      N + ++    DAC    K  I  LV KSL+ IS  
Sbjct: 435 ALEEDEKSVFLDMACIYIGKEYQLANMENMLYAHFDAC---MKYHIGVLVEKSLIKISWT 491

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI------- 486
            K  +HDL+ +M  EIVR ES  +PGKRSRLW  EDI QVL +N  TS    I       
Sbjct: 492 GKYIVHDLIGDMAKEIVRLESPDEPGKRSRLWFHEDIIQVLEDNSGTSAIKSIYLMECDD 551

Query: 487 ----------NLDSLKELYLGG---CSNLKRFPEISCNIE-----------DLDLKETAI 522
                     N+ +LK L + G       K  P     +E           D + K+ AI
Sbjct: 552 EVELDESAFKNMKNLKTLIIKGGHFSKGPKHLPNSLRVVEWWNYPSEYFPYDFNPKKLAI 611

Query: 523 EELPSS------------------------------IGNLSRLVDLDL---TNCSGLKSV 549
            ELP S                              I + S L++L+L     C  L ++
Sbjct: 612 FELPKSSLMSLKLTDLMKKFLNMKILNFDDAEFLTEIPDTSSLLNLELFSFKRCKNLTTI 671

Query: 550 SSRLCNLKSLRRLNLSGCLKLEK----------------------LPEEIGNLESLEYLN 587
              +  L+ L+ L+  GC KL K                       PE +G +E+++ L 
Sbjct: 672 HESVGFLEKLKVLSAQGCRKLRKFPPIKLISLEELNVSFCTNLESFPEILGKMENMKNLV 731

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNC 614
           L E  F+++P+S + L+ L  L+L+ C
Sbjct: 732 LEETSFKEMPNSFQNLTHLQTLQLRCC 758



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 41/190 (21%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL+EL +  C+NL+ FPEI     N+++L L+ET+ +E+P+S  NL+ L  L L  
Sbjct: 698 IKLISLEELNVSFCTNLESFPEILGKMENMKNLVLEETSFKEMPNSFQNLTHLQTLQLRC 757

Query: 543 CSGLK--------------------------------SVSSRL-CNLKSLRRLNLSGC-L 568
           C   K                                 VSS +  N++SLR   L+ C L
Sbjct: 758 CGVFKLPSCILTMPKLVEIIGWVSEGWQFPKSDEAEDKVSSMVPSNVESLR---LTFCNL 814

Query: 569 KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL-PCGS 627
             E +P  +    +++ L+LA  +F  +P  +K+   L  L +  C  LQ +  + P   
Sbjct: 815 SDEFVPIILTWFVNVKELHLAHNNFTILPECIKECHLLRVLCVDECHYLQEVRGIAPNLK 874

Query: 628 SIHARHCTSL 637
            ++AR C SL
Sbjct: 875 ILYARGCKSL 884


>gi|15235924|ref|NP_193422.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
 gi|75097884|sp|O23530.3|SNC1_ARATH RecName: Full=Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1;
           Short=AtSNC1; AltName: Full=Disease resistance RPP5-like
           protein
 gi|5302803|emb|CAB46044.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268440|emb|CAB80960.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658420|gb|AEE83820.1| protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 [Arabidopsis thaliana]
          Length = 1301

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 241/696 (34%), Positives = 365/696 (52%), Gaps = 96/696 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           +ASSS S       ++DVF SFRG+DVR +F+SHL   L R K  TFIDD++ R   I P
Sbjct: 3   IASSSGS------RRYDVFPSFRGEDVRDSFLSHLLKEL-RGKAITFIDDEIERSRSIGP 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG--- 117
            L SAI+ S+I+IVIFS+ YASS WCLNELV+I +      Q+V+P+F+ VD S+     
Sbjct: 56  ELLSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQT 115

Query: 118 ------------------------YCPSLGWMGIFDIP--TSESVLIEGNVNDISKKLSD 151
                                      ++  M  +D+    SE+ +IE    D+ +K   
Sbjct: 116 GEFGKVFEETCKAKSEDEKQSWKQALAAVAVMAGYDLRKWPSEAAMIEELAEDVLRK--T 173

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHF 210
           + PSD+   LVG+E+ I+ I+S L   S E    VGIWG  GIGK+TI  A+YS +S  F
Sbjct: 174 MTPSDDFGDLVGIENHIEAIKSVLCLESKEARIMVGIWGQSGIGKSTIGRALYSKLSIQF 233

Query: 211 EGSYFM------------QNIRDESE---KVGGLANI---HLNFERRRLSRMKVLIVFYD 252
               F+              +R E E   ++ G  +I   H     +RL + KVLI+  D
Sbjct: 234 HHRAFITYKSTSGSDVSGMKLRWEKELLSEILGQKDIKIEHFGVVEQRLKQQKVLILLDD 293

Query: 253 LTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           +  L+ +  L+G+ + F  GSR+I+ T+D QLLK H    +  ++EV+  S + +LT+  
Sbjct: 294 VDSLEFLKTLVGKAEWFGSGSRIIVITQDRQLLKAHE---IDLIYEVEFPSEHLALTMLC 350

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
           R+AFG++ P   F EL+  V K A  +PL L VLGS LKG ++E W   + +L+   + D
Sbjct: 351 RSAFGKDSPPDDFKELAFEVAKLAGNLPLGLSVLGSSLKGRTKEWWMEMMPRLRNGLNGD 410

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           I K L+VSYD L  ++Q++FL  AC F G +   V + L        +G + L  KSL+ 
Sbjct: 411 IMKTLRVSYDRLHQKDQDMFLYIACLFNGFEVSYVKDLL-----KDNVGFTMLTEKSLIR 465

Query: 433 IS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           I+ +  I MH+LL+++G EI R +S  +PGKR  L + EDI++V+ E T   T  GI L 
Sbjct: 466 ITPDGYIEMHNLLEKLGREIDRAKSKGNPGKRRFLTNFEDIHEVVTEKTGTETLLGIRLP 525

Query: 490 ---------------------SLKELYLGGCSNLKR-FPEISCNIEDLDLKETAIEELPS 527
                                +L+ L +G   +L +    +   +  LD  +  ++ LPS
Sbjct: 526 FEEYFSTRPLLIDKESFKGMRNLQYLEIGYYGDLPQSLVYLPLKLRLLDWDDCPLKSLPS 585

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEY 585
           +      LV+L +   S L+ +      L SL+ +NL     L+++P+     NLE L+ 
Sbjct: 586 TF-KAEYLVNL-IMKYSKLEKLWEGTLPLGSLKEMNLRYSNNLKEIPDLSLAINLEELDL 643

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +    K    +PSS++  +KL  L + +CK+L+S P
Sbjct: 644 VGC--KSLVTLPSSIQNATKLIYLDMSDCKKLESFP 677



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/190 (41%), Positives = 110/190 (57%), Gaps = 20/190 (10%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL+ L L GCS+L+ FP IS NI  L L+ TAIEE+PS+IGNL RLV L++ 
Sbjct: 836  LPTDVNLSSLETLDLSGCSSLRSFPLISTNIVWLYLENTAIEEIPSTIGNLHRLVRLEMK 895

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
             C+GL+ + + + NL SL  L+LSGC  L   P      ES+++L L     E+IP  + 
Sbjct: 896  KCTGLEVLPTDV-NLSSLETLDLSGCSSLRSFP---LISESIKWLYLENTAIEEIP-DLS 950

Query: 602  QLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLS---NSSTLLTRSSKHW 654
            + + L +L+L NCK L +LP     L    S   + CT L+ L    N S+L+       
Sbjct: 951  KATNLKNLKLNNCKSLVTLPTTIGNLQKLVSFEMKECTGLEVLPIDVNLSSLM------- 1003

Query: 655  DIFNFSNCSN 664
             I + S CS+
Sbjct: 1004 -ILDLSGCSS 1012



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 87/139 (62%), Gaps = 4/139 (2%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LP  +NL SL  L L GCS+L+ FP IS NI  L L+ TAIEE+PS+IGNL RLV L++ 
Sbjct: 993  LPIDVNLSSLMILDLSGCSSLRTFPLISTNIVWLYLENTAIEEIPSTIGNLHRLVKLEMK 1052

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
             C+GL+ + + + NL SL  L+LSGC  L   P     +E L   N A    E++P  ++
Sbjct: 1053 ECTGLEVLPTDV-NLSSLMILDLSGCSSLRTFPLISTRIECLYLQNTA---IEEVPCCIE 1108

Query: 602  QLSKLSDLRLQNCKRLQSL 620
              ++L+ L +  C+RL+++
Sbjct: 1109 DFTRLTVLMMYCCQRLKTI 1127



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 51/86 (59%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS  IE L L+ TAIEE+P  I + +RL  L + 
Sbjct: 1060 LPTDVNLSSLMILDLSGCSSLRTFPLISTRIECLYLQNTAIEEVPCCIEDFTRLTVLMMY 1119

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L  L   + + C
Sbjct: 1120 CCQRLKTISPNIFRLTRLELADFTDC 1145



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 19/192 (9%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
           S PT +NL+SL+ L L GC NL+ FP I     D+D  E   E  +     N +    LD
Sbjct: 675 SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLD 734

Query: 540 LTNCSGLKSVSSRLCNLK--SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             +C          C  +   L  LN+ G  K EKL E I +L SLE ++L+E ++  +I
Sbjct: 735 YLDC----LTRCMPCEFRPEQLAFLNVRG-YKHEKLWEGIQSLGSLEGMDLSESENLTEI 789

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
           P  + + +KL  L L NCK L +LP     L     +  + CT L+ L     L      
Sbjct: 790 P-DLSKATKLESLILNNCKSLVTLPSTIGNLHRLVRLEMKECTGLEVLPTDVNL-----S 843

Query: 653 HWDIFNFSNCSN 664
             +  + S CS+
Sbjct: 844 SLETLDLSGCSS 855



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 32/112 (28%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVD 537
           +LP G    SLKE+ L   +NLK  P++S   N+E+LDL    ++  LPSSI N ++L+ 
Sbjct: 609 TLPLG----SLKEMNLRYSNNLKEIPDLSLAINLEELDLVGCKSLVTLPSSIQNATKLIY 664

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           LD+++C                         KLE  P ++ NLESLEYLNL 
Sbjct: 665 LDMSDCK------------------------KLESFPTDL-NLESLEYLNLT 691


>gi|356561218|ref|XP_003548880.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1059

 Score =  311 bits (796), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 249/717 (34%), Positives = 358/717 (49%), Gaps = 103/717 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+ F  +L   L    I TFIDD +L +G+EI+ +L  AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRYGFTGNLYNVLRERGIHTFIDDDELQKGDEITTALEEAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPS-----DAGYCPSLG----- 123
           + SE YASS +CLNEL  IL  ++ K  ++V+PVFY V+PS        Y  +L      
Sbjct: 68  VLSENYASSSFCLNELTHILNFTEGKNDRLVLPVFYKVNPSIVRKHRGSYGEALANHEKK 127

Query: 124 -----------W-MGI------------FDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                      W M +             D    E   I+  V  +S K +  F     D
Sbjct: 128 LNSNNMEKLETWKMALQQVSNISGHHFQHDGGKYEYKFIKEIVESVSSKFNRAF-LHVPD 186

Query: 160 QLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
            LVG+ES + E++S L +      + VGI G+  +GKTT+A A+Y++I+  FE S F+ N
Sbjct: 187 VLVGLESPVLEVKSLLDIESDDVVHMVGIHGLAAVGKTTLAVAVYNSIADQFEASCFLAN 246

Query: 219 IRDESEKVG-------------GLANIHLNFER-------RRLSRMKVLIVFYDLTDLKQ 258
           +R+ S K+G             G   I L   R        +L + KVL++  D+ + KQ
Sbjct: 247 VRETSNKIGLEDLQSILLSKTVGEKKIKLTNWREGIPIIKHKLKQKKVLLILDDVDEHKQ 306

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG- 317
           +  +IG  D F  GSRVIITTRD  LL  H    V   ++VKEL+   +L L ++ AF  
Sbjct: 307 LQAIIGNPDWFGRGSRVIITTRDEHLLALHN---VKITYKVKELNEKHALQLLTQKAFEL 363

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           +      + ++ N  + YA+G+PLAL+V+GS L   S EEWESA+N  +R+P + I  +L
Sbjct: 364 EKEVDPSYHDILNRAVTYASGLPLALEVIGSNLFEKSIEEWESALNGYERIPDIKIYAIL 423

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAKIGISRLVGKSLVTI 433
           KVSYD L+++E++IFLD AC FK  +   V + L A    C    K  I  LV KSL+ I
Sbjct: 424 KVSYDALNEDEKSIFLDIACCFKDYELAEVQDILYAHYGRC---MKYHIGVLVKKSLINI 480

Query: 434 S--NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGIN 487
              +  I +H+L+++MG EIVR+ES  +P KRSRLW  +DI QVL EN          +N
Sbjct: 481 HRLHKVIRLHNLIEDMGKEIVRRESPTEPWKRSRLWFHDDINQVLQENKGTSKIEIICMN 540

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS-------------- 533
             S  E         K+   +   I   D      + LP+++  L               
Sbjct: 541 FSSFGEEVEWDGDAFKKMKNLKTLIIKSDCFSKGPKHLPNTLRVLEWWRCPSQDWPHNFN 600

Query: 534 -------RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
                  +L D   T+         +  NL S   LNLS C  L ++P ++  L  LE L
Sbjct: 601 PKQLAICKLPDNSFTSLGLAPLFEKKFVNLTS---LNLSMCDSLTEIP-DVSCLSKLEKL 656

Query: 587 NLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
           + A  ++   I  S+  L KL  L  + C+ L+S P L   S       +C SL++ 
Sbjct: 657 SFARCRNLFTIHHSVGLLEKLKILDAEGCRELKSFPPLKLTSLERFELSYCVSLESF 713



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTN 542
           +NL SL    L  C +L   P++SC   +E L       +  +  S+G L +L  LD   
Sbjct: 628 VNLTSLN---LSMCDSLTEIPDVSCLSKLEKLSFARCRNLFTIHHSVGLLEKLKILDAEG 684

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C  LKS       L SL R  LS C+ LE  PE +G +E++  L L +    K+P S + 
Sbjct: 685 CRELKSFPP--LKLTSLERFELSYCVSLESFPEILGKMENITELGLIDCPITKLPPSFRN 742

Query: 603 LSKLSDLRL-QNCKRLQSL 620
           L++L  L L Q   RL+  
Sbjct: 743 LTRLQVLYLGQETYRLRGF 761


>gi|357499227|ref|XP_003619902.1| Disease resistance protein [Medicago truncatula]
 gi|355494917|gb|AES76120.1| Disease resistance protein [Medicago truncatula]
          Length = 1660

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 239/688 (34%), Positives = 357/688 (51%), Gaps = 76/688 (11%)

Query: 18   VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
            VFL+FRG D R+NF  +L  AL  + I TFID+  L RG+EI+ SL  AIE S I I IF
Sbjct: 375  VFLNFRGSDTRNNFTGNLYKALVDKGINTFIDENDLQRGDEITSSLVKAIEESGIFIPIF 434

Query: 77   SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG-------- 123
            S  YASS +CL+ELV I+   N    +V+PVFY V+P+        Y   L         
Sbjct: 435  SANYASSSFCLDELVHIIHCYNTKSCLVLPVFYDVEPTHIRHQSGSYGEHLTKHKEGFQN 494

Query: 124  ----------W-MGI----------FDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                      W M +          +    SE   IE  V  IS K++ +F +  K   V
Sbjct: 495  NEKNMERLRQWKMALTQAANLSGYHYSPHESECKFIEKIVEGISNKINHVFLNVAK-YPV 553

Query: 163  GVESIIKEIESQLLSGS-TEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
            G++S I++++  L  GS  E   VGI+G GG+GK+T+A A++++I+  FEG  F+ N+R+
Sbjct: 554  GLQSRIEQVKLLLDMGSENEVRMVGIFGTGGMGKSTLAKAVFNSIADQFEGVCFLHNVRE 613

Query: 222  ESEKVGGLANIH-------LNFE-------------RRRLSRMKVLIVFYDLTDLKQIDL 261
             S  +  L ++        + F+             + RLSR K+L++  D+  L+Q+D 
Sbjct: 614  NS-TLKNLKHLQKKLLSKIVKFDGQIEDVSEGIPIIKERLSRKKILLILDDVDKLEQLDA 672

Query: 262  LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
            L G LD F  GSRVIITTRD +LL  H  +       V+ L+  ++L L SRNAF  +  
Sbjct: 673  LAGGLDWFGLGSRVIITTRDKRLLAYHVNTST---HAVEGLNETEALELLSRNAFKNDKV 729

Query: 322  AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             + + ++ N V+ YA+G+PLA+  +G+ L G   E+WE  +++ + +P  DIQ++L+VSY
Sbjct: 730  PSSYEDILNRVVTYASGLPLAIVTIGANLIGRKVEDWERILDEYENIPDKDIQRILQVSY 789

Query: 382  DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI--GISRLVGKSLVTI--SNNK 437
            D L +++Q++FLD AC FKG     V   L A  +   I   +  L  KSL+     +  
Sbjct: 790  DALKEKDQSVFLDIACCFKGCKWTKVKKILHA-HYGHPIEHHVGVLAEKSLIGHWEYDTH 848

Query: 438  ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG-INLDSLKELYL 496
            +T+HDL+++MG E+VRQES K PG+RSRLW  +DI  VL +NT   TG I +  LK  + 
Sbjct: 849  VTLHDLIEDMGKEVVRQESPKKPGERSRLWFRDDIVNVLRDNTG--TGNIEMIYLKYAFT 906

Query: 497  GGCSNLKRFP-EISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
               +       E   N++ L +K+      P  + +  R      +    L  +SS+  N
Sbjct: 907  ARETEWDGMACEKMTNLKTLIIKDGNFSRGPGYLPSSLRYWKWISSPLKSLSCISSKEFN 966

Query: 556  LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNC 614
               ++ + L G   L  +P ++  L +LE  +    D   KI SS+  L+KL  L    C
Sbjct: 967  Y--MKVMTLDGSQYLTHIP-DVSGLPNLEKCSFRGCDSLIKIHSSIGHLNKLEILDTFGC 1023

Query: 615  KRLQSLP--ELPCGSSIHARHCTSLKTL 640
              L+  P  +LP         C SLK  
Sbjct: 1024 SELEHFPPLQLPSLKKFEITDCVSLKNF 1051



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/98 (53%), Positives = 66/98 (67%), Gaps = 1/98 (1%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
           VFLSFRG D R+NF  +L  AL  + I TFIDD  L RG+EI+P L  A+E S+I I IF
Sbjct: 9   VFLSFRGSDTRNNFTGNLYKALIDKGICTFIDDNDLERGDEITPKLVKAMEESRIFIPIF 68

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
           S  YASS +CL+ELV I+        +V+PVFY V+P+
Sbjct: 69  SANYASSSFCLDELVHIIHCYKTKSCLVLPVFYDVEPT 106



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 16/180 (8%)

Query: 486  INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLT- 541
            + L SLK+  +  C +LK FPE+ C   NI+D+++ +T+IEELP S  N S+L  L ++ 
Sbjct: 1032 LQLPSLKKFEITDCVSLKNFPELLCEMTNIKDIEIYDTSIEELPYSFQNFSKLQRLTISG 1091

Query: 542  -NCSG---LKSVSSRLCN--LKSLRRLNLSG-CLKLEKLPEEIGNLESLEYLNLA-EKDF 593
             N  G       + ++ +  + ++  LNL+G  L  E LP  +    ++ +L+L+   +F
Sbjct: 1092 GNLQGKLRFPKYNDKMNSIVISNVEHLNLAGNSLSDECLPILLKWFVNVTFLDLSCNYNF 1151

Query: 594  EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
              +P  + +  +L  L L+ CK L  +  +P     + A  C S   LS+SS  +  S K
Sbjct: 1152 TILPECLGECHRLKHLNLKFCKALVEIRGIPPNLEMLFAVMCYS---LSSSSIRMLMSQK 1208



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 66/127 (51%), Gaps = 5/127 (3%)

Query: 488  LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
             + +K + L G   L   P++S   N+E    +   ++ ++ SSIG+L++L  LD   CS
Sbjct: 965  FNYMKVMTLDGSQYLTHIPDVSGLPNLEKCSFRGCDSLIKIHSSIGHLNKLEILDTFGCS 1024

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+        L SL++  ++ C+ L+  PE +  + +++ + + +   E++P S +  S
Sbjct: 1025 ELEHFPP--LQLPSLKKFEITDCVSLKNFPELLCEMTNIKDIEIYDTSIEELPYSFQNFS 1082

Query: 605  KLSDLRL 611
            KL  L +
Sbjct: 1083 KLQRLTI 1089


>gi|297809025|ref|XP_002872396.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318233|gb|EFH48655.1| hypothetical protein ARALYDRAFT_489751 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 918

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 243/721 (33%), Positives = 352/721 (48%), Gaps = 123/721 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G+DVR  F++H    L R+ I  F D+++ RG+ I P L  AI+ S+I++V+
Sbjct: 8   YDVFTSFSGEDVRVTFLTHFFKELDRKMIIAFKDNEIERGHSIGPKLIKAIKDSRIAVVV 67

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GYCPSLG 123
           FS+ Y+SS WCLNEL++I+    K  +IV+P+FY +DPSD               C +  
Sbjct: 68  FSKNYSSSSWCLNELLEIV----KCQEIVIPIFYDLDPSDVRKQEGEFGESFKKTCKNRT 123

Query: 124 ------W----MGIFDI-------PTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 W      + +I       P  E+ LIE   N++  KL  L PS + D+  G+E 
Sbjct: 124 KDEIQRWREALTNVANIAGYHTGKPNDEAKLIEEIANNVLDKLMKLTPSKDFDEFFGIEE 183

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM-QNIRDESEK 225
            IKE+   L   S E   VGIWG  GIGKTTIA A+++ +  HF+G  F+ +    +S  
Sbjct: 184 HIKELSVLLCLESQEVRMVGIWGATGIGKTTIARALFNRLYRHFQGRVFIDRAFISKSMD 243

Query: 226 VGGLANI--------------------------HLNFERRRLSRMKVLIVFYDLTDLKQI 259
           +   AN                           HL+  + RL  MKVL+   DL D   +
Sbjct: 244 IYSRANPDDYNLKLHLQEKFLSKLLDKKNLEINHLDAVKERLKNMKVLLFIDDLDDQVVL 303

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L  +   F  GSR+I+ T+D  LL   R   + +++EV   S + ++ +F R+AF QN
Sbjct: 304 EALACQTQWFGDGSRIIVITKDKHLL---RAYGIDNIYEVLLPSKDLAIKMFCRSAFRQN 360

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  GF+ELS  V++ A  +PL L +LGSYL+G ++E W   +   +      I+K L+V
Sbjct: 361 SPPNGFIELSYEVVQRAGSLPLGLNILGSYLRGRNKEIWMEMMPGFRNKLDGKIEKTLRV 420

Query: 380 SYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           SYDGLD  ++Q IF   AC F       +   L     +   G+  LV KSL+ I   + 
Sbjct: 421 SYDGLDSKDDQAIFRHIACIFNFETCSDIKKLLADSGLNVTNGLINLVDKSLIRIKPKQK 480

Query: 439 T--MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLK 492
           T  MH LLQE G EIVR +S+ DP KR  L   +DIY VL++ +     L   +++D + 
Sbjct: 481 TVEMHCLLQETGREIVRAQSVDDPRKREFLVDGKDIYDVLDDCSGTKKVLGISLDIDEID 540

Query: 493 ELYL-----GGCSNLKRFPEISCNI-----EDLDLKETAIEELPSSIGNLS--------- 533
           EL+L      G  NL RF ++  N      ED  L       LP+++  LS         
Sbjct: 541 ELHLHVDAFKGMRNL-RFLKLYTNTKISEKEDKLLLPKEFNYLPNTLRLLSWQRFPMRCM 599

Query: 534 -------RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG-------------------- 566
                   LV L +T  S L+ +   +  L+ L+ +NL G                    
Sbjct: 600 PSEFFPKYLVKLIMTG-SKLEKLWEGVMPLQCLKTINLFGSQNLKEFPDLSLATSLETLS 658

Query: 567 ---CLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
              CL L ++P  IGNL  L YLN L   + E +P+ +  L  LS L L  C RL+  P 
Sbjct: 659 LGYCLSLVEVPSTIGNLNKLTYLNMLGCHNLETLPADI-NLKSLSHLILNGCSRLKIFPA 717

Query: 623 L 623
           L
Sbjct: 718 L 718



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 56/92 (60%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           + P  +NL SLK + L  CS LK FP+IS NI +LDL +TAIEE+P  I N S+L  L +
Sbjct: 827 TFPNDVNLQSLKRINLARCSRLKIFPDISTNISELDLSQTAIEEVPWWIENFSKLEYLLM 886

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
             C  L+ V   +  LK L+ ++ S C +L K
Sbjct: 887 GKCDMLEHVFLNISKLKHLKSVDFSDCGRLTK 918



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 7/169 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LP  INL SL  L L GCS LK FP +S NI +L L   A+E+ PS++ +L  LV L +
Sbjct: 691 TLPADINLKSLSHLILNGCSRLKIFPALSTNISELTLNLLAVEKFPSNL-HLENLVYLII 749

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSS 599
              + +K +   +  L SL+ ++L     L+++P ++    +L  LNL E     ++PS+
Sbjct: 750 QGMTSVK-LWDGVKVLTSLKTMDLRDSKNLKEIP-DLSMASNLLILNLRECLSLVELPST 807

Query: 600 MKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           ++ L  L++L +  C  L++ P    L     I+   C+ LK   + ST
Sbjct: 808 IRNLHNLAELDMSGCTNLETFPNDVNLQSLKRINLARCSRLKIFPDIST 856



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 90/153 (58%), Gaps = 10/153 (6%)

Query: 472 IYQVLNENTS--LPTGIN-LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEEL 525
           +Y ++   TS  L  G+  L SLK + L    NLK  P++S   N+  L+L+E  ++ EL
Sbjct: 745 VYLIIQGMTSVKLWDGVKVLTSLKTMDLRDSKNLKEIPDLSMASNLLILNLRECLSLVEL 804

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           PS+I NL  L +LD++ C+ L++  + + NL+SL+R+NL+ C +L+  P+   N+  L+ 
Sbjct: 805 PSTIRNLHNLAELDMSGCTNLETFPNDV-NLQSLKRINLARCSRLKIFPDISTNISELD- 862

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
             L++   E++P  ++  SKL  L +  C  L+
Sbjct: 863 --LSQTAIEEVPWWIENFSKLEYLLMGKCDMLE 893


>gi|336238978|gb|AEI27416.1| TIR_3 [Helianthus annuus]
          Length = 1111

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 248/704 (35%), Positives = 357/704 (50%), Gaps = 98/704 (13%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGS 69
           IP   H+VFLSFRG+D R NFV HL   L ++ I T+ DD+ L RG  I P+L  AI+ S
Sbjct: 72  IPAWNHEVFLSFRGEDTRKNFVDHLYKDLVQQGIHTYKDDQTLPRGESIGPALLKAIQES 131

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL-- 122
           +I++V+FS+ YA S WCL+EL   +E  +  GQIV+P+FY VDPSD       Y  +L  
Sbjct: 132 RIALVVFSQNYADSSWCLDELAHTMECVDTNGQIVIPIFYHVDPSDVRKQKGKYGKALSK 191

Query: 123 -----------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                                  GW+      + E+  I   V  IS +LS L  +DNKD
Sbjct: 192 HERKNKQKVESWRNALEKAGNLSGWVINNTENSHEAKCISDIVGTISSRLSILNTNDNKD 251

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            L+G+E+ +++++  L  GS     VGIWG+GG GKTT+ASA Y+ IS  FE    +QNI
Sbjct: 252 -LIGMETRLRDLKLMLEIGSGGVRMVGIWGVGGGGKTTLASAAYAEISHRFEACCLLQNI 310

Query: 220 RDESEKVG------GLANIHLNFE--------------RRRLSRMKVLIVFYDLTDLKQI 259
           R+ES K G       + ++ L  +              RRRL   +VL+V  D+ DL+Q+
Sbjct: 311 REESNKHGLEKLQEKILSVALKTKDVVVGSEIEGRSTIRRRLCHKRVLVVLDDVDDLEQL 370

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH--VFEVKELSYNDSLTLFSRNAFG 317
           + L G  D F  GSR+IITTRD  LL     S   H  ++EV  LS+ +++ LF R+A+ 
Sbjct: 371 EALAGSHDWFGEGSRIIITTRDKHLL-----SSTAHTNIYEVSLLSHYEAIKLFHRHAYN 425

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           ++ P   F  LS  V+ YA G+PLA++VLGS+L     +EW+S + KLK +P   + + L
Sbjct: 426 KDKPVEDFETLSLDVVSYAGGLPLAVKVLGSFLYDKDRDEWKSTLAKLKCIPEEKVMERL 485

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYL---VMNFLDACRFSAKIGISRLVGKSLVTIS 434
           K+SYDGL+  ++++FLD ACF      +     M  LDAC F   IG+  L  KSL+ + 
Sbjct: 486 KISYDGLEPYQKDLFLDIACFMMSWYSHQFDDAMMVLDACNFHPVIGLKVLEQKSLIKVV 545

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN--LDSLK 492
             +  MHDL+QEM   IVR E   +  K SR+W  +D+  + +   + P+  N  L  L 
Sbjct: 546 AGEFEMHDLMQEMAHYIVRGEHPNNLEKHSRIWKWKDLEYLCDMGAAAPSMENEVLADLP 605

Query: 493 ELYLGG------CSNLKR-------------FPE---------ISCNIED-----LDLKE 519
              +         +N+K+             FP             N +      L LK 
Sbjct: 606 RYIISHPGLFDVVANMKKLRWILWDNHPASLFPSNFQPTKAFLFPSNFQPTKLRCLLLKH 665

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           +  ++L     +L  L  LDL N   L         L  L RL L  C  LE++   IG 
Sbjct: 666 SQQKKLWEGCKSLPNLKILDLQNFRNLIKTPD-FEGLPCLERLILVCCESLEEIHPSIGY 724

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            +SL ++++      K    +  + KL  L L  CK LQ  P++
Sbjct: 725 HKSLVFVDMRLCSALKRFPPIIHMKKLETLDLSWCKELQQFPDI 768



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 38/195 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNL-SRLVD 537
            P  I++  L+ L L  C  L++FP+I  N++ L   DL  T IE +P S+G   + LV 
Sbjct: 742 FPPIIHMKKLETLDLSWCKELQQFPDIQSNMDSLVTLDLCLTRIEIIPPSVGRFCTNLVS 801

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-------------LKLEKLPEEIGNLE--- 581
             L  C  LK +      LKSL+ LNLSGC             LKL + P  +  L    
Sbjct: 802 FSLHGCRKLKRIEGNFHLLKSLKDLNLSGCIGLQSFHHEGSVSLKLPRFPRFLRKLNLHR 861

Query: 582 -----------------SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                            +L+ L+L+E +F ++PS + Q+  L  L L +C  L  LP+LP
Sbjct: 862 CNLGDGDIPSDIFCKLLNLQVLDLSENNFSRLPSDLSQILCLKLLNLSDCINLVELPDLP 921

Query: 625 CGSSI-HARHCTSLK 638
              +I  A  C SL+
Sbjct: 922 SSIAILKANGCDSLE 936



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
           ++EE+  SIG    LV +D+  CS LK     + ++K L  L+LS C +L++ P+   N+
Sbjct: 714 SLEEIHPSIGYHKSLVFVDMRLCSALKRFPP-IIHMKKLETLDLSWCKELQQFPDIQSNM 772

Query: 581 ESLEYLNLAEKDFEKIPSSMKQL-SKLSDLRLQNCKRLQSL 620
           +SL  L+L     E IP S+ +  + L    L  C++L+ +
Sbjct: 773 DSLVTLDLCLTRIEIIPPSVGRFCTNLVSFSLHGCRKLKRI 813


>gi|317415955|emb|CAR94520.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 806

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 251/743 (33%), Positives = 381/743 (51%), Gaps = 135/743 (18%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSK 70
           P PK +VFLSFR  D R  F  +L  AL    I TF+D ++L  G  +S  L  A E S+
Sbjct: 19  PPPKCEVFLSFRSFDSRKGFTDNLYKALIHYGIHTFMDAEQLESGEPVSTDLFKATEESQ 78

Query: 71  ISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDA----------GYC 119
           IS++I S  YA+S WCLNELV ++E ++N   ++++PVFY + PS+A          G+ 
Sbjct: 79  ISVIILSTNYATSTWCLNELVTMVELAENNESRLILPVFYGMTPSEARKQIGVHFEEGFA 138

Query: 120 --------------------PSLGWMGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDN 157
                                ++  +  +DI    +E+++IE  V  I   L + F +D 
Sbjct: 139 QHKKDFEGEPGEVARWKKSLTAIANLSGYDIRNYRNETMVIEKIVERIFGVLINTFSNDL 198

Query: 158 KDQLVGVESIIKEIESQLLS-GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           KD  VG++ +  EI+S +   G+ E   +GI G+ GIGK+TIA A+   I + F+   F+
Sbjct: 199 KD-FVGMDRV-NEIKSNMSRIGTEEVRVIGICGMPGIGKSTIAKALSQRIRNQFDAFSFI 256

Query: 217 QNIRDESEKVG------GLANIHLNFE----------RRRLSRMKVLIVFYDLTDLKQID 260
             + + S K         L +  LN +          R+RL   +VLIV  ++ +L+QID
Sbjct: 257 SKVGEISRKKSLFHIKEQLCDHLLNMQVTTKNVDDVIRKRLCNKRVLIVLDNVEELEQID 316

Query: 261 LLIGRLDG-------FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            + G  DG       F  GS++IITT   +LL N+       ++ +++L+ ++SL LF R
Sbjct: 317 AVAGN-DGADELSSRFGKGSKIIITTACERLLINYNPK----IYTIEKLTQDESLLLFCR 371

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF ++HP  G+ +L    + Y +G+PLAL+V G+ L   S E+W S +  LK   +   
Sbjct: 372 KAFKKDHPMDGYEKLCYEFLDYVDGLPLALEVFGNSLLNRSVEDWSSRLASLKDDNYSGK 431

Query: 374 QKV---LKVSYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
            K+   LK S+DGL+++EQ  IFLD ACFFKG D   V N  ++C +   I ++ L  K 
Sbjct: 432 NKIVNYLKESFDGLENQEQREIFLDIACFFKGEDACRVENIFESCGYYPGINLNILCEKY 491

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI- 486
           LV+I   K+ MH+LLQ+MG E+VR ES K+ G RSRLW   +   VL  N+ T    GI 
Sbjct: 492 LVSIVGGKLWMHNLLQQMGREVVRGESKKE-GARSRLWLHTEAIHVLKGNKGTDAVQGIF 550

Query: 487 -----------------NLDSLKELYL-----GGCSNL----------KRFPEISC---- 510
                            N+D+L+ L +      GC              ++P  S     
Sbjct: 551 LSLPHPDKVHLKKDPFSNMDNLRLLKIYNVEFSGCLEYLSDELSFLEWHKYPLKSLPSSF 610

Query: 511 ---NIEDLDLKETAIEELPSSIGN-LSRLVDLDLTNCS--------------------GL 546
               + +L+L E+ IE+L   I   L +L+ L+L++C                     G 
Sbjct: 611 EPDKLVELNLSESEIEQLWEEIERPLEKLLILNLSDCQKLIKIPDFDKVPNLEQLILKGC 670

Query: 547 KSVSS--RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            S+S    + NL+SL    LSGC KLEKLPE   +++ L  L+L     E++P+S++ LS
Sbjct: 671 TSLSEVPDIINLRSLTNFILSGCSKLEKLPEIGEDMKQLRKLHLDGTAIEELPTSIEHLS 730

Query: 605 KLSDLRLQNCKRLQSLPELPCGS 627
            L+ L L++CK L SLP++ C S
Sbjct: 731 GLTLLDLRDCKNLLSLPDVLCDS 753



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 73/112 (65%), Gaps = 4/112 (3%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           + +P  INL SL    L GCS L++ PEI  +++ L    L  TAIEELP+SI +LS L 
Sbjct: 674 SEVPDIINLRSLTNFILSGCSKLEKLPEIGEDMKQLRKLHLDGTAIEELPTSIEHLSGLT 733

Query: 537 DLDLTNCSGLKSVSSRLCN-LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
            LDL +C  L S+   LC+ L SL+ LNLSGC  L+KLP+ +G+LE L+ L+
Sbjct: 734 LLDLRDCKNLLSLPDVLCDSLTSLQVLNLSGCSNLDKLPDNLGSLECLQELD 785


>gi|51477388|gb|AAU04761.1| MRGH13 [Cucumis melo]
          Length = 1024

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 250/762 (32%), Positives = 371/762 (48%), Gaps = 115/762 (15%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSS 64
           S S+ + P   +DVFLS R KD   +F + L+ AL  + I  F DD      E    +  
Sbjct: 27  SISLPLPPLRNYDVFLSHRAKDTGQSFAADLHEALTSQGIVVFRDDVDEEDGEKPYGVEE 86

Query: 65  ---AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----- 116
              A+E S+ SIV+FSE Y S   C+ E+ KI   K    Q+V+P+FY +DP +      
Sbjct: 87  KMKAVEESRSSIVVFSENYGSFV-CMKEVGKIAMCKELMDQLVLPIFYKIDPGNVRKQEG 145

Query: 117 ---------------------GYCPSLGWMG------IFDIPTSESVLIEGNVNDISKKL 149
                                 +  S+  +G      + D  + E  +I+  V  I  KL
Sbjct: 146 NFEKYFNEHEANPKIDIEEVENWRYSMNQVGHLSGWHVQDSQSEEGSIIDEVVKHIFNKL 205

Query: 150 -SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
             DLF  D  D+LVG+   + +I   L  G  +   VGIWG+GGIGKTT+A  IY ++S 
Sbjct: 206 RPDLFRYD--DKLVGITPRLHQINMLLGIGLDDVRFVGIWGMGGIGKTTLARIIYKSVSH 263

Query: 209 HFEGSYFMQNIRDESEK-----------VGGLANIHLNFE--------RRRLSRMKVLIV 249
            F+G YF+ N+++  +K            G L   +++          +RR+S++K LI+
Sbjct: 264 LFDGCYFLDNVKEALKKEDIASLQQKLITGTLMKRNIDIPNADGATLIKRRISKIKALII 323

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+  L Q+  L G LD F  GSRVI+TTRD  LL +H   R    + V+ L   + L 
Sbjct: 324 LDDVNHLSQLQKLAGGLDWFGSGSRVIVTTRDEHLLISHGIERR---YNVEVLKIEEGLQ 380

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS+ AFG+ HP   + +L + V+ YA G+PLA++VLGS L     E+W +AV KL  + 
Sbjct: 381 LFSQKAFGEEHPKEEYFDLCSQVVNYAGGLPLAIEVLGSSLHNKPMEDWINAVEKLWEVR 440

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
             +I + LK+SY  L++ EQ IFLD ACFFK   +   +  L++  F A +G+  L  K 
Sbjct: 441 DKEIIEKLKISYYMLEESEQKIFLDIACFFKRKSKNQAIEILESFGFPAVLGLEILEEKC 500

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGIN 487
           L+T  ++K+ +HDL+QEMG EIVR     +P KR+RLW  EDI   L  ++ T    GI 
Sbjct: 501 LITAPHDKLQIHDLIQEMGQEIVRHTFPNEPEKRTRLWLREDINLALSRDQGTEAIEGIM 560

Query: 488 LD------------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
           +D                  +L+ L L      +    +S  +  L+     ++ LPS+ 
Sbjct: 561 MDFDEEGESHLNAKAFSSMTNLRVLKLNNVHLCEEIEYLSDQLRFLNWHGYPLKTLPSNF 620

Query: 530 GNLSRLVDLDLTNCS--GLKSVSSRLCNLK--------------------SLRRLNLSGC 567
            N + L++L+L N S   L + S  +  LK                    +L RL LSGC
Sbjct: 621 -NPTNLLELELPNSSIHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGC 679

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
           ++L +L   +GNL+ L  L+L   K    IP ++  L  L  L L  C  L   P++   
Sbjct: 680 VELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNI-CLESLKILVLSGCSSLTHFPKISSN 738

Query: 627 SS----IHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
            +    +H    TS+K L +S   LT       + N  NC+N
Sbjct: 739 MNYLLELHLEE-TSIKVLHSSIGHLTSLV----VLNLKNCTN 775



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 91/140 (65%), Gaps = 3/140 (2%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           T++P  I L+SLK L L GCS+L  FP+IS N+    +L L+ET+I+ L SSIG+L+ LV
Sbjct: 707 TNIPFNICLESLKILVLSGCSSLTHFPKISSNMNYLLELHLEETSIKVLHSSIGHLTSLV 766

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L NC+ L  + S + +L SL+ LNL+GC +L+ LPE +GN+ SLE L++      + 
Sbjct: 767 VLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSELDSLPESLGNISSLEKLDITSTCVNQA 826

Query: 597 PSSMKQLSKLSDLRLQNCKR 616
           P S + L+KL  L  Q   R
Sbjct: 827 PMSFQLLTKLEILNCQGLSR 846



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 11/161 (6%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDL 540
           T  ++++LK + L     L + P+ S   N+E L L     + +L  S+GNL  L+ LDL
Sbjct: 641 TSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQLDL 700

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  L ++   +C L+SL+ L LSGC  L   P+   N+  L  L+L E   + + SS+
Sbjct: 701 RNCKKLTNIPFNIC-LESLKILVLSGCSSLTHFPKISSNMNYLLELHLEETSIKVLHSSI 759

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
             L+ L  L L+NC  L  LP     S+I +   TSLKTL+
Sbjct: 760 GHLTSLVVLNLKNCTNLLKLP-----STIGS--LTSLKTLN 793


>gi|357452821|ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
 gi|355485735|gb|AES66938.1| Disease-resistance protein [Medicago truncatula]
          Length = 1288

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 201/544 (36%), Positives = 282/544 (51%), Gaps = 61/544 (11%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISP 60
           ++SS   N     ++DVF+SFRG D R+ FV HL A L R+ I  F DD +L +G  +SP
Sbjct: 50  SNSSMDFNNDQSYRYDVFISFRGPDTRNTFVDHLYAHLKRKGIFAFKDDQRLEKGESLSP 109

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG--- 117
            L  AI+ S++SIV+FSE YA S WCL E+  + E + +  Q V PVFY VDPS      
Sbjct: 110 QLLQAIQNSRVSIVVFSERYAESTWCLEEMATVAECRKRLKQTVFPVFYDVDPSHVRKHI 169

Query: 118 -----------------------YCPSLGWMGIFDIP-TSESVLIEGNVNDISKKLSDLF 153
                                      LG +  FD+    E   IE  V  + K L+  F
Sbjct: 170 GVFKANNSHTKTYDRNKVVRWQEAMTELGNLVGFDVRYKPEFTEIEKIVQAVIKTLNHKF 229

Query: 154 PSDNKDQLVGVESIIKEIES--QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
                D LVG++  I+++E   +L S + +F  +GIWG+GG+GKTT A+ +Y  IS  F+
Sbjct: 230 SGFTND-LVGMQPRIEQLEKLLKLSSENDDFRVLGIWGMGGVGKTTHATVLYDRISYQFD 288

Query: 212 GSYFMQNIRD------------------------ESEKVGGLANIHLNFERRRLSRMKVL 247
              F+ N                           +S     +A I +N   R  S +KVL
Sbjct: 289 ARCFIHNTSKIYMDGGIVSVQKQILGQTLDERNLDSYDTCEIAGIMIN---RLQSGIKVL 345

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  ++  L+Q+  L         GSR+IITTRD  +L+ + G+   H  EV  L+ ND+
Sbjct: 346 LVLDNIDHLEQLQELAINPKLLCRGSRIIITTRDEHILRVY-GADTVH--EVPLLNSNDA 402

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
             LF R AF      +  +EL   V+KYA  +PLA++V+GS+L      +W+ A+  LK 
Sbjct: 403 YELFCRKAFKGEDQTSDCVELIPEVLKYAQHLPLAIKVVGSFLCTRDATQWKDALASLKN 462

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
            P   I  VL++S DGL  EE+ IF+  ACFFKG  +  V   LDAC     IGI R++ 
Sbjct: 463 SPDSKIMDVLQMSIDGLQHEEKEIFMHIACFFKGEREVYVKRILDACGLHPHIGIQRILE 522

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN 487
           KSL+TI N +I MHD+LQE+G +IVR    ++PG  SRLW   D Y VL   T  PT  +
Sbjct: 523 KSLITIKNQEIHMHDMLQELGKKIVRHRFPEEPGSWSRLWRYNDFYHVLMTETDTPTSAS 582

Query: 488 LDSL 491
           +  +
Sbjct: 583 IHKI 586



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 30/168 (17%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           NL SL+ L L GC+ L++ P+ +   N+E LD+   T++  +  SIG +++L  L L +C
Sbjct: 790 NLYSLRVLRLSGCTKLEKTPDFTGASNLEYLDMDGCTSLSTVHESIGAIAKLRFLSLRDC 849

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKL---------------------------EKLPEE 576
             L  + + +  + SL  L+L GCLKL                            K+P+ 
Sbjct: 850 IILAGIPNSINTITSLVTLDLRGCLKLTTLPLGQNLSSSHMESLIFLDVSFCNLNKVPDA 909

Query: 577 IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           IG L  LE LNL   +F+ +P +   L +LS L L +C +L++ P +P
Sbjct: 910 IGELHCLERLNLQGNNFDALPYTFLNLGRLSYLNLAHCHKLRAFPHIP 957



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 14/139 (10%)

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           +L++  + I+ L     +L  L  +DL+N S   + + +      L RL+ +GC  L ++
Sbjct: 701 ELNMPHSNIQRLWEGRKDLPYLKRMDLSN-SKFLTETPKFFWTPILERLDFTGCTNLIQV 759

Query: 574 PEEIGNLESLEYL------NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
              IG+L  L +L      +L   DF      +  L  L  LRL  C +L+  P+    S
Sbjct: 760 HPSIGHLTELVFLSLQNCSSLVNLDF----GIVSNLYSLRVLRLSGCTKLEKTPDFTGAS 815

Query: 628 SIHARH---CTSLKTLSNS 643
           ++       CTSL T+  S
Sbjct: 816 NLEYLDMDGCTSLSTVHES 834


>gi|357499485|ref|XP_003620031.1| Resistance-gene protein [Medicago truncatula]
 gi|355495046|gb|AES76249.1| Resistance-gene protein [Medicago truncatula]
          Length = 813

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 238/691 (34%), Positives = 351/691 (50%), Gaps = 91/691 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D RH F  +L  AL  + I TFIDD  L RG+EI+PSL +AIE S+I I 
Sbjct: 11  YQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSRIFIP 70

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FSE YASS +CL+ELV I    +  G +V+PVF  VDP+D       Y  +L       
Sbjct: 71  VFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAVHKKKF 130

Query: 124 ------------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                       W        +          E   I   V DIS ++S   P D     
Sbjct: 131 QNDKDNTERLQQWKEALSQAANLSGQHYKHGYEYEFIGKIVEDISNRISRE-PLDVAKYP 189

Query: 162 VGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           VG++S ++ ++  L   S  E + VG++G GGIGK+T+A AIY+ I+  FE   F++N+R
Sbjct: 190 VGLQSRVQHVKGHLDEKSDDEVHMVGLYGTGGIGKSTLAKAIYNFIADQFEVLCFLENVR 249

Query: 221 DESE--------------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
             S                     K+GG++   +   ++RL R K+L++  D+  L Q++
Sbjct: 250 VNSTSDNLKHLQEKLLLKTVRLDIKLGGVSQ-GIPIIKQRLCRKKILLILDDVDKLDQLE 308

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G LD F PGSRVIITTR+  LLK H G    H   V+ L+  ++L L    AF +N 
Sbjct: 309 ALAGGLDWFGPGSRVIITTRNKHLLKIH-GIESTHA--VEGLNATEALELLRWMAFKENV 365

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P++   ++ N  + YA+G+PLA+ ++GS L G S ++  S ++  + +P+ +IQ++LKVS
Sbjct: 366 PSS-HEDILNRALTYASGLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRILKVS 424

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI-GISRLVGKSLVT--ISNNK 437
           YD L+ EEQ++FLD AC FKG     V   L A      +  ++ L  KSL+     ++ 
Sbjct: 425 YDSLEKEEQSVFLDIACCFKGCKWPEVKEILHAHYGHCIVHHVAVLAEKSLMDHLKYDSY 484

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGINLDSLKE 493
           +T+HDL+++MG E+VRQES  +PG+RSRLW   DI  VL +NT         +   S++ 
Sbjct: 485 VTLHDLIEDMGKEVVRQESPDEPGERSRLWFERDIVHVLKKNTGTRKIKMINMKFPSMES 544

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD---------------- 537
                 +  ++   +   I +      ++E LPSS+  +   +                 
Sbjct: 545 DIDWNGNAFEKMTNLKTFITENGHHSKSLEYLPSSLRVMKGCIPKSPSSSSSNKKFEDMK 604

Query: 538 -LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE--KDFE 594
            L L NC  L  +   +  L +L + +   C  L  +   +  L  LE LN AE  +  E
Sbjct: 605 VLILNNCEYLTHIPD-VSGLPNLEKFSFVRCHNLVTIHNSLRYLNRLEILN-AEGCEKLE 662

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             P    Q   L +L L NCK L+S PEL C
Sbjct: 663 SFPPL--QSPSLQNLELSNCKSLKSFPELLC 691


>gi|356514965|ref|XP_003526172.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1518

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 245/769 (31%), Positives = 399/769 (51%), Gaps = 140/769 (18%)

Query: 2    ASSSSSINMIPH---PKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNE 57
            ++S+S+I M  +   P +DVF+SFRG+D R++F + L  AL +  I  F DD  L +G  
Sbjct: 285  SNSASAIAMASNATIPTYDVFVSFRGEDTRNSFTAFLFDALSQNGIHAFKDDTHLQKGES 344

Query: 58   ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-QIVVPVFYLVDPSDA 116
            I+P L  AI+GS + +V+FS+ YASS WCL EL  I     +     V+P+FY VDPS+ 
Sbjct: 345  IAPELLLAIQGSGLFVVVFSKNYASSTWCLRELAHICNCTIQASPSRVLPIFYDVDPSEL 404

Query: 117  GYCPSLGWMGI----------------------------------FDIPT-SESVLIEGN 141
                  G+ GI                                  ++I   S+  +IE  
Sbjct: 405  R--KQSGYYGIAFAEHERRFRGDKEKMEELQRWREALKQVANISGWNIQNESQPAVIEKI 462

Query: 142  VNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGS-TEFNTVGIWGIGGIGKTTIAS 200
            V +I  +L   F +  K  LVG+ES ++E+E  L     ++   VGI G+GGIGKTT+A 
Sbjct: 463  VLEIKCRLGSKFQNLPKGNLVGMESCVEELEKCLELELVSDVRVVGICGMGGIGKTTLAR 522

Query: 201  AIYSNISSHFEGSYFMQNIRDESEKVGGLA-------------NIHLNFERR-------R 240
            A+Y  IS  ++   F+ ++++  +K+G L              NI +    +       R
Sbjct: 523  ALYEKISYQYDFHCFVDDVKEIYKKIGSLGVQKQLLSQCVNDKNIEICNASKGTYLIGTR 582

Query: 241  LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVP-----GSRVIITTRDVQLLKNHRGSRVGH 295
            L   + LIV  +++ ++Q+ +  G  +  +      GSR+I+ +RD  +L+ H    V H
Sbjct: 583  LRNKRGLIVLDNVSRVEQLHMFTGSRETLLRECVGGGSRIIVISRDEHILRTHG---VNH 639

Query: 296  VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            V++VK L+ ++++ LF +NAF  ++  +G+  L++ V+ +A G PLA+QV+G++L+G + 
Sbjct: 640  VYQVKPLNQDNAVQLFCKNAFKCDYILSGYKMLTHDVLSHAQGHPLAIQVIGNFLQGRNV 699

Query: 356  EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQY-----LVMNF 410
             +W+S + +L  +   DI KVL++SYD L+++++ IFLD ACFF  +  Y      V   
Sbjct: 700  SQWKSTLVRLNEIKSEDIMKVLRISYDDLEEKDKEIFLDIACFFSRDYSYKYSERYVKEI 759

Query: 411  LDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE 470
            LD   F+ +IG+  LV KSL+TIS+ KI MH LL+++G  IVR++S K+P   SRLW  +
Sbjct: 760  LDFRGFNPEIGLPILVDKSLITISHGKIYMHRLLRDLGKCIVREKSPKEPRNWSRLWDWK 819

Query: 471  DIYQVLNENTS----------------LPTGINLDSLKELYLGGCSNLK--RFPEIS--- 509
            D+Y+VL+ N                    T + +D+L ++      NLK   FPE +   
Sbjct: 820  DLYEVLSNNMKAKNLEAIVVEDKTWMFFETTMRVDALSKM-----KNLKLLMFPEYTKFS 874

Query: 510  --------------------------C----NIEDLDLKETAIEELPSSIGNLSRLVDLD 539
                                      C    N+ +LDL  + I+ L  S   + +L  L+
Sbjct: 875  GNLNYVSNNKLGYLIWPYYPFNFLPQCFQPHNLIELDLSRSNIQHLWDSTQPIPKLRRLN 934

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
            L+  S L  +     +L +LR+LNL GC +L ++   IG+L  LE LNL + K   K+P 
Sbjct: 935  LS-LSALVKLPDFAEDL-NLRQLNLEGCEQLRQIHPSIGHLTKLEVLNLKDCKSLVKLPD 992

Query: 599  SMKQLSKLSDLRLQNCKRLQ----SLPELPCGSSIHARHCTSLKTLSNS 643
              + L+ L +L L+ C++L+    S+  L     ++ + C SL++L N+
Sbjct: 993  FAEDLN-LRELNLEGCEQLRQIHPSIGHLTKLVKLNLKDCKSLESLPNN 1040



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 84/171 (49%), Gaps = 16/171 (9%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD-- 537
            SLP  I  L SL+ L L GCS L              LK+  I E PS   ++       
Sbjct: 1036 SLPNNILRLSSLQYLSLFGCSKLYNIRSSEEQRGAGHLKKLRIGEAPSRSQSIFSFFKKG 1095

Query: 538  LDLTNCSGLKSVS-----SRLCNLKSL------RRLNLSGCLKLEKLPEEIGNLESLEYL 586
            L   + +  KS+      S  C L SL      R L+LS C  L K+P+   N + LE L
Sbjct: 1096 LPWPSVAFDKSLEDAHKDSVRCLLPSLPIFPCMRELDLSFC-NLLKIPDAFVNFQCLEEL 1154

Query: 587  NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSL 637
             L   +FE +PS +K+LSKL  L LQ+CKRL+ LPELP  + +   + T++
Sbjct: 1155 YLMGNNFETLPS-LKELSKLLHLNLQHCKRLKYLPELPSRTDLFWWNWTTV 1204



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 483  PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE------ELPSSIGNLSRLV 536
            P+  +L  L+ L L  C +L + P+ +   EDL+L+E  +E      ++  SIG+L++LV
Sbjct: 968  PSIGHLTKLEVLNLKDCKSLVKLPDFA---EDLNLRELNLEGCEQLRQIHPSIGHLTKLV 1024

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL--PEEIGNLESLEYLNLAEKD-- 592
             L+L +C  L+S+ + +  L SL+ L+L GC KL  +   EE      L+ L + E    
Sbjct: 1025 KLNLKDCKSLESLPNNILRLSSLQYLSLFGCSKLYNIRSSEEQRGAGHLKKLRIGEAPSR 1084

Query: 593  ----FEKIPSSMKQLSKLSDLRLQNCKR------LQSLPELPCGSSIHARHCTSLK 638
                F      +   S   D  L++  +      L SLP  PC   +    C  LK
Sbjct: 1085 SQSIFSFFKKGLPWPSVAFDKSLEDAHKDSVRCLLPSLPIFPCMRELDLSFCNLLK 1140


>gi|105922482|gb|ABF81419.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 209/529 (39%), Positives = 296/529 (55%), Gaps = 64/529 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA+S S        K+DVFLSFRG+D R +F  HL  ALC   + TF DD+ L RGNEIS
Sbjct: 1   MAASYSRTTT--RWKYDVFLSFRGEDTRKSFTDHLYTALCHRGVITFRDDQELERGNEIS 58

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-- 117
             L  AI+ S+ S+++FS  Y SS WCLNELVKI+E   +  Q V+PVFY VDPS+    
Sbjct: 59  RELLQAIQDSRFSVIVFSRNYTSSTWCLNELVKIVECMKQGRQTVIPVFYDVDPSEVRNQ 118

Query: 118 --------------YCPSLGWMGIFDIPTS--------------ESVLIEGNVNDISKKL 149
                         +  ++  +  + I                 ES  I+G V +I  KL
Sbjct: 119 TGRLQQAFADHEEVFKDNIEKVQTWRIAMKLVANLSGWDLQDRHESEFIQGIVEEIVCKL 178

Query: 150 --SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIG---KTTIASAIYS 204
             S    S   + LVG++  ++E+   L  G  + N V + GI G+G   KTTIA A+Y 
Sbjct: 179 RKSSYSMSWVTENLVGMDWRLEEM--SLYLGVEQLNDVRVIGICGMGGIGKTTIARAVYE 236

Query: 205 NISSHFEGSYFMQNIRDESEKVG------------------GLANIH--LNFERRRLSRM 244
            +  HFEGS F+ N+R+  EK G                   ++++H  +N  R RL   
Sbjct: 237 KMLGHFEGSSFLANVREVEEKHGLVRLQEQLLSDTLMDRRTKISDVHRGMNEIRVRLRSR 296

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
            VL+V  D+  L Q++ L+G  + F  GSRVIITTRD  LLK      V  ++ V  L+ 
Sbjct: 297 MVLVVLDDVDQLVQLESLVGDRNWFDNGSRVIITTRDELLLKQFG---VDKIYRVASLNN 353

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM-SEEEWESAVN 363
            +++ LF   AF    P   ++  +  V+KYA+G+PLAL VLGS+  G+ S E W  ++ 
Sbjct: 354 IEAVQLFCLKAFRSYCPPEDYVLQTIQVVKYADGLPLALHVLGSFFSGIRSVELWNHSLK 413

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           +LK +P   I   LK+S+DGL++ E+ IFLD ACFF G ++  V   +++  F  +IGI 
Sbjct: 414 RLKDIPDKGILDKLKISFDGLNEVEKKIFLDIACFFNGWEEDCVTKLMESSGFYPQIGIR 473

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI 472
            LV K L+ IS+N++ MHDLLQEMG +IV++ES ++PGKR+RLW  ED+
Sbjct: 474 ILVEKFLINISDNRVWMHDLLQEMGRQIVKRESHEEPGKRTRLWLCEDV 522



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 108/209 (51%), Gaps = 29/209 (13%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           LPT I  L +L+ L L GC  L++ PE+     N+E+LD+  TAI +LPS+ G   +L  
Sbjct: 719 LPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFGLWKKLKV 778

Query: 538 LDLTNCSGLKSVS-SRLCNLKSLRR--------------------LNLSGCLKLE-KLPE 575
           L    C G    S   L + +SL R                    LNLS C  +E +LP+
Sbjct: 779 LSFDGCKGPAPKSWYSLFSFRSLPRNPCPITLMLSSLSTLYSLTKLNLSNCNLMEGELPD 838

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
           ++    SLE L+L   +F +IPSS+ +LSKL  LRL NCK+LQSLP+LP     +    C
Sbjct: 839 DMSCFPSLEELDLIGNNFVRIPSSISRLSKLKSLRLGNCKKLQSLPDLPSRLEYLGVDGC 898

Query: 635 TSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
            SL TL N      R SK   +  F NCS
Sbjct: 899 ASLGTLPNLFEECAR-SKFLSLI-FMNCS 925



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 14/152 (9%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  L+ + L    NL + P+     N+E L+L+    + ++  SIG L  LV L+L +C 
Sbjct: 655 LKLLRAIDLRHSRNLIKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCV 714

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L  + + +C LK+LR LNL GC KLEKLPE +GN+ +LE L++      ++PS+     
Sbjct: 715 KLACLPTNICELKTLRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFGLWK 774

Query: 605 KLSDLRLQNCK-----------RLQSLPELPC 625
           KL  L    CK             +SLP  PC
Sbjct: 775 KLKVLSFDGCKGPAPKSWYSLFSFRSLPRNPC 806


>gi|356561214|ref|XP_003548878.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1320

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 249/719 (34%), Positives = 365/719 (50%), Gaps = 107/719 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+ F  +L   L    I TFIDD+ L +G+EI+ +L  AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRYGFTGNLYNVLRERGIHTFIDDEELQKGDEITTALEEAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPS-----DAGYCPSLG----- 123
           + SE YA S +CLNEL  IL  ++ K   +V+PVFY V+PS        Y  +L      
Sbjct: 68  VLSENYAYSSFCLNELTHILNFTEGKNDPLVLPVFYKVNPSYVRHHRGSYGEALANHEKK 127

Query: 124 -----------W-MGIFDIP--TSESVLIEGN------VNDISKKLSDLFPSDNKDQ--- 160
                      W M +  +   +   +  +GN      + +I + +S  F  D+ D    
Sbjct: 128 LNSNNMEKLETWKMALRQVSNISGHHLQHDGNKYEYKFIKEIVESVSSKFNRDHLDVPNV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG+ES +++++S L  G  +  + VGI G+ G+GKTT+A A+Y++I+ HFE S F++N+
Sbjct: 188 LVGLESPVRQVKSLLDVGRDDVVHMVGIHGLAGVGKTTLAVAVYNSIADHFESSCFLENV 247

Query: 220 RDESEKVGGLANIHLNFERR-------------------RLSRMKVLIVFYDLTDLKQID 260
           R+ + K  GL ++   F  +                   +L + KVL++  D+ + KQ+ 
Sbjct: 248 RETTNK-KGLEDLQSAFLSKTAGEIKLTNWREGITIIKCKLKQKKVLLILDDVDEHKQLQ 306

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-QN 319
            +IG  D F  GSRVIITTRD  LL  H    V   ++V+EL+   +L L +  AF  + 
Sbjct: 307 AIIGSPDWFGRGSRVIITTRDEHLLALHN---VKITYKVRELNEKHALQLLTHKAFELEK 363

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                + ++ N  I YA+G+PLAL+V+GS L   S EEWESA++  +R+P   I  +LKV
Sbjct: 364 EVDPSYHDILNRAITYASGLPLALEVIGSNLLEKSIEEWESALDGYERIPDKKIYDILKV 423

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNNK- 437
           SYD L+++E+NIFLD AC FK      + + L A      K  I  LV KSL+ I  +  
Sbjct: 424 SYDALNEDEKNIFLDIACCFKAYKLEELQDILYAHYGHCMKYHIGVLVKKSLINIHGSWD 483

Query: 438 ---ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDS 490
              + +HDL+++MG EIVR+ES  +PGKRSRLW  EDI QVL EN          +N  S
Sbjct: 484 YKVMRLHDLIEDMGKEIVRRESPTNPGKRSRLWSHEDINQVLQENKGTSKIEIICMNFSS 543

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL------------ 538
             E         K+      N++ L +K     E P  + N  R+++             
Sbjct: 544 FGEEVEWDGDAFKKMK----NLKTLIIKSDCFSEGPKHLPNTLRVLEWWRCPSQDWPHNF 599

Query: 539 ---DLTNC----SGLKSV------SSRLCNLKSLRRLNLSGCLKLEKLPEE--IGNLESL 583
               L  C    S   SV        RL NL SL    L  C  L ++P+   + NLE+L
Sbjct: 600 NPKQLAICKLPDSSFTSVGLAPLFEKRLVNLTSLI---LDECDSLTEIPDVSCLSNLENL 656

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
            +     ++   I  S+  L KL  L  + C  L+S P L   S       +C SL++ 
Sbjct: 657 SFRKC--RNLFTIHHSVGLLEKLKILDAECCPELKSFPPLKLTSLERFELWYCVSLESF 713



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 5/145 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L +L  L L  C +L   P++SC  N+E+L  ++   +  +  S+G L +L  LD   C 
Sbjct: 627 LVNLTSLILDECDSLTEIPDVSCLSNLENLSFRKCRNLFTIHHSVGLLEKLKILDAECCP 686

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS       L SL R  L  C+ LE  PE +G +E++  L L E    K+P S + L+
Sbjct: 687 ELKSFPP--LKLTSLERFELWYCVSLESFPEILGKMENITQLCLYECPITKLPPSFRNLT 744

Query: 605 KLSDLRLQNCKRLQSLPELPCGSSI 629
           +L  L L +  + + L +    + I
Sbjct: 745 RLRSLSLGHHHQTEQLMDFDAATLI 769


>gi|358248732|ref|NP_001239675.1| TMV resistance protein N-like [Glycine max]
 gi|295083323|gb|ADF78115.1| rj2 protein [Glycine max]
 gi|295083325|gb|ADF78116.1| rj2 protein [Glycine max]
 gi|295083327|gb|ADF78117.1| rj2 protein [Glycine max]
 gi|308171400|gb|ADO15994.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1051

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 379/744 (50%), Gaps = 132/744 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 116 -AGYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTKVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNN------KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +      ++TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPRVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE 524
           QVL +N  TS    I LD        + EL      N K F ++  N++ L ++     +
Sbjct: 527 QVLEDNKGTSEIEIICLDFPCFGKEEIVEL------NTKAFKKMK-NLKTLIIRNGKFSK 579

Query: 525 LPSSIGNLSRLVDL--DLTNC--SGLKSVSSRLCNLK-----------------SLRRLN 563
            P  + N  R+++     ++C  S        +C L                  +LR LN
Sbjct: 580 GPKYLPNNLRVLEWWRYPSHCLPSDFHPKKLSICKLPYSCISSFEWDGLWKMFVNLRTLN 639

Query: 564 LSGCLKLEKLPEEIG--NLESLEY---LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
             GC  L ++P+  G  NLE   +   LNL       + +S+  L KL  L    CKRL+
Sbjct: 640 FDGCKCLTQIPDVSGLPNLEEFSFEHCLNLI-----TVHNSIGFLDKLKTLNAFRCKRLR 694

Query: 619 SLPELPCGS--SIHARHCTSLKTL 640
           S P +   S   ++   C SL++ 
Sbjct: 695 SFPPIKLTSLEKLNLSFCYSLESF 718



 Score = 42.4 bits (98), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 38/199 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI +L L  ++I EL  S  NL+ L  LDL+ 
Sbjct: 699 IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSITELSFSFQNLAGLQALDLSF 758

Query: 543 CS--GLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLES------------- 582
            S   +  V S +  +  L  + + G      LK E+  E+ G++ S             
Sbjct: 759 LSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNL 818

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L + +CK L+ +  +P    
Sbjct: 819 SDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLK 878

Query: 628 SIHARHCTSLKTLSNSSTL 646
              A +C SL + S S  L
Sbjct: 879 HFFAINCKSLTSSSISKFL 897


>gi|51477389|gb|AAU04762.1| MRGH21 [Cucumis melo]
          Length = 1020

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 248/768 (32%), Positives = 381/768 (49%), Gaps = 123/768 (16%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHN------FVSHLNAALCREKIETFID--DKLNRGN 56
           S S+ + P  ++DVFLS R KD R N      F+S L+ AL  + I  FID  D+ + G 
Sbjct: 23  SISLPLPPLRRYDVFLSHRAKDHRANNDTGRSFISDLHEALTSQGIVVFIDKEDEEDGGK 82

Query: 57  EISPSLSSAIEGSKISIVIFSEGYASSRW-CLNELVKILESKNKYGQIVVPVFYLVDPSD 115
            ++  +  A++ S+ SIV+FSE Y S  W C+ E+ KI   +    Q+V+P+FY VDP D
Sbjct: 83  PLTEKMK-AVDESRSSIVVFSENYGS--WVCMKEIRKIRMCQKSRDQLVLPIFYKVDPGD 139

Query: 116 AGYCPSLGWMGIFDIPTS--------------------------------ESVLIEGNVN 143
                    +  F+   +                                E  +I+  V+
Sbjct: 140 VRKQEGESLVKFFNEHEANPNISIEEVKKWRKSMNKVGNLSGWHLQDSQFEEGIIKEVVD 199

Query: 144 DISKKL-SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAI 202
            I  KL  DLF  D  D+LVG+   + EI   +  G  +   +GIWG+ GIGKTTIA  I
Sbjct: 200 HIFNKLRPDLFRYD--DKLVGISRRLHEINKLMGIGLDDVRFIGIWGMSGIGKTTIARII 257

Query: 203 YSNISSHFEGSYFMQNIRDESEK-----------VGGLANIHLNFE--------RRRLSR 243
           Y ++S  F+G YF+ N+++  +K            G L   +++          +RR+S 
Sbjct: 258 YKSVSHLFDGCYFLDNVKEALKKEGIASLQQKLLTGALMKRNIDIPNADGATLIKRRISN 317

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
           +K LI+  D+ ++ Q+  L G LD F  GSRVI+TT+   +L +H   R    + V+ L 
Sbjct: 318 IKALIILDDVDNVSQLRQLAGSLDWFGSGSRVIVTTKHEDILVSHGIERR---YNVEVLK 374

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            ++ + LFS+ AFG+++P  G+ +L + V+ YA G+PLA++VLGS L+    E+W  AV 
Sbjct: 375 IDEGIQLFSQKAFGEDYPKEGYFDLCSQVVDYAGGLPLAIEVLGSSLRNKPMEDWIDAVK 434

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           KL  +   +I + LK+SY  L+++++ IFLD ACFFK   +   +  L++  F A +G+ 
Sbjct: 435 KLWEVRDKEINEKLKISYYMLENDDREIFLDIACFFKRKSKRRAIEILESFGFPAVLGLD 494

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTS 481
            L  KSL+T  + KI MHDL+QEMG +IV +E   +P KRSRLW  EDI + L  ++ T 
Sbjct: 495 ILKEKSLITTPHEKIQMHDLIQEMGQKIVNEEFPDEPEKRSRLWLREDINRALSRDQGTE 554

Query: 482 LPTGINLD------------------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE 523
              GI +D                  +L+ L L      +    +S  +  L+     ++
Sbjct: 555 EIEGIMMDLDEEGESHLNAKSFSSMTNLRVLKLNNVHLCEEIEYLSDQLRFLNWHGYPLK 614

Query: 524 ELPSSIGNLSRLVDLDLTNCS--GLKSVSSRLCNLK--------------------SLRR 561
            LPS+  N + L++L+L N S   L + S  +  LK                    +L R
Sbjct: 615 TLPSNF-NPTNLLELELPNSSIHLLWTTSKSMETLKVINLSDSQFLSKTPDFSVVPNLER 673

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           L LSGC++L +L   +GNL+ L  L+L   K    IP ++  L  L  L L  C  L   
Sbjct: 674 LVLSGCVELHQLHHSLGNLKHLIQLDLRNCKKLTNIPFNI-CLESLKILVLSGCSSLTHF 732

Query: 621 PELPCGSS----IHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           P++    +    +H    TS+K L +S   LT       + N  NC+N
Sbjct: 733 PKISSNMNYLLELHLEE-TSIKVLHSSIGHLTSLV----VLNLKNCTN 775



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 91/140 (65%), Gaps = 3/140 (2%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           T++P  I L+SLK L L GCS+L  FP+IS N+    +L L+ET+I+ L SSIG+L+ LV
Sbjct: 707 TNIPFNICLESLKILVLSGCSSLTHFPKISSNMNYLLELHLEETSIKVLHSSIGHLTSLV 766

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L NC+ L  + S + +L SL+ LNL+GC KL+ LPE +GN+ SLE L++      + 
Sbjct: 767 VLNLKNCTNLLKLPSTIGSLTSLKTLNLNGCSKLDSLPESLGNISSLEKLDITSTCVNQA 826

Query: 597 PSSMKQLSKLSDLRLQNCKR 616
           P S + L+KL  L  Q   R
Sbjct: 827 PMSFQLLTKLEILNCQGLSR 846



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 11/161 (6%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDL 540
           T  ++++LK + L     L + P+ S   N+E L L     + +L  S+GNL  L+ LDL
Sbjct: 641 TSKSMETLKVINLSDSQFLSKTPDFSVVPNLERLVLSGCVELHQLHHSLGNLKHLIQLDL 700

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  L ++   +C L+SL+ L LSGC  L   P+   N+  L  L+L E   + + SS+
Sbjct: 701 RNCKKLTNIPFNIC-LESLKILVLSGCSSLTHFPKISSNMNYLLELHLEETSIKVLHSSI 759

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
             L+ L  L L+NC  L  LP     S+I +   TSLKTL+
Sbjct: 760 GHLTSLVVLNLKNCTNLLKLP-----STIGS--LTSLKTLN 793



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/191 (32%), Positives = 86/191 (45%), Gaps = 33/191 (17%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVD 537
           LP+ I +L SLK L L GCS L   PE   NI   E LD+  T + + P S   L++L  
Sbjct: 779 LPSTIGSLTSLKTLNLNGCSKLDSLPESLGNISSLEKLDITSTCVNQAPMSFQLLTKL-- 836

Query: 538 LDLTNCSGLK-----------SVSSRLCNLK-------------SLRRLNLSGC-LKLEK 572
            ++ NC GL            + + +  N               SLR LNLS C L    
Sbjct: 837 -EILNCQGLSRKFLHSLFPTWNFTRKFSNYSQGLRVTNWFTFGCSLRILNLSDCNLWDGD 895

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC-KRLQSLPELPCGSSIHA 631
           LP ++ +L SL+ L+L++  F K+P S+  L  L DL L  C   L           + A
Sbjct: 896 LPNDLHSLASLQILHLSKNHFTKLPESICHLVNLRDLFLVECFHLLSLPKLPLSVRDVEA 955

Query: 632 RHCTSLKTLSN 642
           R C SL+   N
Sbjct: 956 RDCVSLREYYN 966


>gi|296089531|emb|CBI39350.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 237/618 (38%), Positives = 309/618 (50%), Gaps = 125/618 (20%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           ES LIE  V DI  KL    PS  K  LVG+ES ++ ++S L  GS +   VGIWG+ GI
Sbjct: 65  ESKLIEEIVRDIWNKLVGTSPSYMKG-LVGMESRLEAMDSLLCIGSLDVRMVGIWGMAGI 123

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--------------------GLANIH 233
           GKTTIA  IY  I + FEG  F+ N+R+ES K G                    GL N  
Sbjct: 124 GKTTIAKVIYERIYTQFEGCCFLSNVREESYKHGLPYLQMELLSQILKERNPNAGLFNKG 183

Query: 234 LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
           +NF +  L   KVLI+  D+   KQ++ L G  + F  GSR+IITTRD  LL       V
Sbjct: 184 INFMKDVLHSRKVLIILDDVDQRKQLEDLAGDNNWFGSGSRIIITTRDRHLLTCQE---V 240

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
             ++EVKEL  +++L LF   AF   H    F +L    + Y +G+PLAL+VLGS L   
Sbjct: 241 DAIYEVKELDNDEALKLFCLYAFRHKHGTEDFRQLCGHALDYTSGLPLALKVLGSSLYTK 300

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
              EW+S ++KLK+ P+ ++Q VLK S++GLDD EQNIFLD A F+KG+D+  V + LD+
Sbjct: 301 GIHEWKSELDKLKQFPNKEVQNVLKTSFEGLDDNEQNIFLDIAFFYKGHDKDFVGDILDS 360

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           C F   IGI  L  KSL+TIS NK+ MHDLLQEMG EIVRQ+S + PG+RSRL   EDI 
Sbjct: 361 CGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIVRQKS-EVPGERSRLRVHEDIN 419

Query: 474 QVLNENTSLPT--GINLD--SLKEL--YLGGCSNLKRFPEIS-CNI------------ED 514
            VL  NT      GI LD  + KEL   +   + +KR   +  CN+            ED
Sbjct: 420 HVLTTNTGTEAVEGIFLDLSASKELNFSIDAFTKMKRLRLLKICNVQIDRSLGYLSKKED 479

Query: 515 LDLKETAIEELPSS---------------------------------------------- 528
           L      ++  PS+                                              
Sbjct: 480 LYWHGYPLKSFPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIPDF 539

Query: 529 --IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN----------------------- 563
             + NL RL+   L  C+ L  V   +  LK L  LN                       
Sbjct: 540 SGVPNLRRLI---LKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILT 596

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           LSGC KL+K PE   N+ESL  L L      ++PSS+  L+ L  L L+NCK+L SLP+ 
Sbjct: 597 LSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQS 656

Query: 624 PCGSSIHARHCTSLKTLS 641
            C         TSL+TL+
Sbjct: 657 FC-------ELTSLRTLT 667



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 3/110 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPEI  N+E   +L L  + I ELPSSIG L+ LV 
Sbjct: 582 SFSSSIHMESLQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVF 641

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
           L+L NC  L S+    C L SLR L L GC +L+ LP+ +G+L+ L  LN
Sbjct: 642 LNLKNCKKLASLPQSFCELTSLRTLTLCGCSELKDLPDNLGSLQCLTELN 691


>gi|356502323|ref|XP_003519969.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 249/711 (35%), Positives = 372/711 (52%), Gaps = 114/711 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F  +L  +LC + + TFIDD+ L RG EI+P+L +AI+ S+I+IV
Sbjct: 18  YDVFLSFRGEDTRQKFTGNLYNSLCEKGVHTFIDDEGLRRGEEITPALLNAIQNSRIAIV 77

Query: 75  IFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPS-----DAGYCPSL------ 122
           +FS+ YASS +CL++LVKILE  K + G+ V P+FY VDPS        Y  +L      
Sbjct: 78  VFSKNYASSTFCLDKLVKILECLKEEKGRSVFPIFYDVDPSHVRHQKGTYSEALAKHEER 137

Query: 123 ----------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                                 GW   F     E   I   V ++ K++S   P    D 
Sbjct: 138 FPDDSDKVQKWRKALYEAANLSGWH--FQHGELEYKSIRKIVKEVYKRIS-CIPLHIADN 194

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            +G+E  + E++S L  GS + N +GI+GIGGIGKTTI+ A+Y+ I S FEG+ F+ +IR
Sbjct: 195 PIGLEHAVLEVKSLLGHGS-DVNIIGIYGIGGIGKTTISRAVYNLICSQFEGTCFLLDIR 253

Query: 221 DESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQI 259
           +++    GL  +                      +   +RRL + KVL+V  D+  L+Q+
Sbjct: 254 EKAINKQGLVQLQEMLLSEVLKKKHIKVGDVNRGIPIIKRRLEKKKVLLVLDDVDKLEQL 313

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L G    F  GS +IITTRD  LL  H    V  +++VK L+   +L LF+  AF  +
Sbjct: 314 KVLAGESRWFGNGSIIIITTRDKHLLATHG---VVKIYDVKPLNVAKALELFNWCAFKNH 370

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEE-----------WE------SAV 362
                ++ ++N  + YA G+PLAL+V+GS+L G S  E           W       SA+
Sbjct: 371 KADPLYVNIANRAVSYACGIPLALEVIGSHLFGKSLNECNSALEGEPCLWAMGYECNSAL 430

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           +K +R+PH  I ++LKVSYDGL++ E+ IFLD ACFF       V + L A  F  K G+
Sbjct: 431 DKYERIPHEKIHEILKVSYDGLEENEKQIFLDIACFFNTCGVGYVTSVLRAHGFHVKDGL 490

Query: 423 SRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
             LV +SL+ I ++  + MHDL+++ G EIVRQES  +PG+RSRLW  EDI  VL ENT 
Sbjct: 491 RVLVDRSLLKIDASGCVRMHDLIRDTGREIVRQESTVEPGRRSRLWFEEDIVHVLEENTG 550

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
                  D ++ + L G +N++           +     A++E+     NL  L+  + T
Sbjct: 551 ------TDKIEFIKLEGYNNIQ-----------VQWNGKALKEM----KNLRILIIENTT 589

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
             +G + + +      SLR L+ S C     LP +  N + +E L + E   + I     
Sbjct: 590 FSTGPEHLPN------SLRVLDWS-CYPSPSLPADF-NPKRVELLLMPESCLQ-IFQPYN 640

Query: 602 QLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSSTLLTR 649
               LS L +++C+ L  LP   E+P  + +   +CT+L  +  S   L +
Sbjct: 641 MFESLSVLSIEDCQFLTDLPSLREVPLLAYLCIDNCTNLVKIDGSIGFLDK 691



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 1/106 (0%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           T + ++  SIG L +L  L    CS LK + +    L SL  L+L GC  L+  PE +G 
Sbjct: 677 TNLVKIDGSIGFLDKLQLLSAKRCSKLK-ILAPCVMLPSLEILDLRGCTCLDSFPEVLGK 735

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           +E+++ + L E   E +P S+     L  L L+ C RL  LP   C
Sbjct: 736 MENIKEIYLDETAIETLPCSIGNFVGLQLLSLRKCGRLHQLPGSIC 781



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDL 538
           L   + L SL+ L L GC+ L  FPE+     NI+++ L ETAIE LP SIGN   L  L
Sbjct: 706 LAPCVMLPSLEILDLRGCTCLDSFPEVLGKMENIKEIYLDETAIETLPCSIGNFVGLQLL 765

Query: 539 DLTNCSGLKSVSSRLCNLKSLR 560
            L  C  L  +   +C L  ++
Sbjct: 766 SLRKCGRLHQLPGSICILPKVK 787


>gi|15236505|ref|NP_192585.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5791483|emb|CAB53527.1| putative protein [Arabidopsis thaliana]
 gi|7267486|emb|CAB77970.1| putative protein [Arabidopsis thaliana]
 gi|332657243|gb|AEE82643.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1234

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 259/774 (33%), Positives = 372/774 (48%), Gaps = 134/774 (17%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL 62
           +SSSS N +    +DVF SF G+D+R  F++H    L R+ I  F D+++ RGN I   L
Sbjct: 2   ASSSSHNWV----YDVFTSFSGEDIRVTFLTHFLKELDRKMIIAFKDNEIERGNSIGTEL 57

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------ 116
             AI+ S+I++V+FS+ Y+SS WCLNELV+I+  K    +IV+PVFY +DPSD       
Sbjct: 58  IQAIKDSRIAVVVFSKKYSSSSWCLNELVEIVNCK----EIVIPVFYDLDPSDVRKQEGE 113

Query: 117 ---GYCPSLGWMGIFDI--------------------PTSESVLIEGNVNDISKKLSDLF 153
               +  +      ++I                    P +E+ LIE   ND+  KL  L 
Sbjct: 114 FGESFKETCKNRTDYEIQRWGQALTNVANIAGYHTRKPNNEAKLIEEITNDVLDKLMKLT 173

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           PS + D+  G+E  IKE+   L   S E   VGIWG  GIGKTTIA A+++ I  HF+G 
Sbjct: 174 PSKDFDEFFGIEDHIKELSLLLCLESEEVRMVGIWGPTGIGKTTIARALFNRIYRHFQGR 233

Query: 214 YFM-QNIRDESEKVGGLANI--------------------------HLNFERRRLSRMKV 246
            F+ +    +S  +   AN                           HL+  + RL +MKV
Sbjct: 234 VFIDRAFISKSMAIYSRANSDDYNLKLHLQEKLLSKLLDKKNLEINHLDAVKERLRQMKV 293

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           LI   DL D   ++ L  +   F  GSR+I+ T+D  LL   R   + H++EV   S + 
Sbjct: 294 LIFIDDLDDQVVLEALACQTQWFGHGSRIIVITKDKHLL---RAYGIDHIYEVLLPSKDL 350

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           ++ +F R+AF ++ P  GF+EL+  V+K A  +PL L +LGSYL+G S+E+W   +  L+
Sbjct: 351 AIKMFCRSAFRKDSPPNGFIELAYDVVKRAGSLPLGLNILGSYLRGRSKEDWIDMMPGLR 410

Query: 367 RMPHMDIQKVLKVSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
                 IQK L+VSYDGL  E +Q IF   AC F       +   L+    +   G+  L
Sbjct: 411 NKLDGKIQKTLRVSYDGLASEDDQAIFRHIACIFNFEACSDIKKLLEDSGLNVTNGLINL 470

Query: 426 VGKSLVTISNNKIT--MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-- 481
           V KSL+ I   + T  MH LLQE   EI+R +S  DPGKR  L   +DI  VL+  +   
Sbjct: 471 VDKSLIRIEPKQKTVEMHCLLQETAREIIRAQSFDDPGKREFLVDGKDIADVLDNCSGTR 530

Query: 482 --LPTGINLDSLKELYLGGCSNLK----RFPEISCNI-----EDLDLKETAIEELPSSIG 530
             L   +++D ++EL+L   +  K    RF ++  N      ED  L       LP+++ 
Sbjct: 531 KVLGISLDMDEIEELHLQVDAFKKMLNLRFLKLYTNTNISEKEDKLLLPKEFNYLPNTLR 590

Query: 531 NLS----------------RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG-------- 566
            LS                 LV L L   S L+ +   +  L+ L+ +NL G        
Sbjct: 591 LLSWQRFPMRCMPSDFFPKYLVKL-LMPGSKLEKLWDGVMPLQCLKNMNLFGSENLKEFP 649

Query: 567 ---------------CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLR 610
                          CL L ++P  IGNL  L YLN++   + EK P+ +  L  LSDL 
Sbjct: 650 NLSLATNLETLSLGFCLSLVEVPSTIGNLNKLTYLNMSGCHNLEKFPADV-NLKSLSDLV 708

Query: 611 LQNCKRLQSLPELP------CGSSIHARHCTSLKTLSNSSTLL---TRSSKHWD 655
           L  C RL+  P +       C +S+      S   L N   LL     S K WD
Sbjct: 709 LNGCSRLKIFPAISSNISELCLNSLAVEEFPSNLHLENLVYLLIWGMTSVKLWD 762



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 58/92 (63%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           + PTGINL SLK + L  CS LK FP+IS NI +LDL +TAIEE+P  I N S+L  L +
Sbjct: 830 TFPTGINLQSLKRINLARCSRLKIFPDISTNISELDLSQTAIEEVPLWIENFSKLKYLIM 889

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
             C+ L+ V   +  LK L+ ++ S C  L K
Sbjct: 890 GKCNMLEYVFLNISKLKHLKSVDFSDCGILSK 921



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 83/134 (61%), Gaps = 7/134 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK ++L    NLK  P++S   N+  L+L++  +I ELPSSI NL  L++LD++ C+
Sbjct: 767 LTSLKTMHLRDSKNLKEIPDLSMASNLLILNLEQCISIVELPSSIRNLHNLIELDMSGCT 826

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L++  + + NL+SL+R+NL+ C +L+  P+   N+  L+   L++   E++P  ++  S
Sbjct: 827 NLETFPTGI-NLQSLKRINLARCSRLKIFPDISTNISELD---LSQTAIEEVPLWIENFS 882

Query: 605 KLSDLRLQNCKRLQ 618
           KL  L +  C  L+
Sbjct: 883 KLKYLIMGKCNMLE 896



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 79/169 (46%), Gaps = 42/169 (24%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            P  +NL SL +L L GCS LK FP IS NI +L L   A+EE PS++ +L  LV L + 
Sbjct: 695 FPADVNLKSLSDLVLNGCSRLKIFPAISSNISELCLNSLAVEEFPSNL-HLENLVYLLIW 753

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
              G+ SV                      KL + +  L SL+ ++L + K+ ++IP  +
Sbjct: 754 ---GMTSV----------------------KLWDGVKVLTSLKTMHLRDSKNLKEIPD-L 787

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH---------CTSLKTL 640
              S L  L L+ C  +  LP     SSI   H         CT+L+T 
Sbjct: 788 SMASNLLILNLEQCISIVELP-----SSIRNLHNLIELDMSGCTNLETF 831


>gi|359493250|ref|XP_002268462.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1439

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 237/657 (36%), Positives = 348/657 (52%), Gaps = 91/657 (13%)

Query: 44  IETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQI 103
           I TF  D++ RG +++ +L  AIE S+   V+ S+ +A SRWCL+EL +I+E +N+ G++
Sbjct: 223 IHTFRLDEI-RGEDVASALFKAIEKSRCIFVVLSKCFAHSRWCLDELERIMECRNQNGKV 281

Query: 104 VVPVFYLVDPSDAGYCPSLGWMG----------IFDIPT--------------------- 132
           V+PVFY VDPSD       GW G          IF   T                     
Sbjct: 282 VLPVFYHVDPSDVR--KQEGWYGEALAQHESRNIFGHKTQRWRAALREVGNLSGWHVQNG 339

Query: 133 SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIES---QLL-SGSTEFNTVGIW 188
           SE   IE     I  + S      +K+ L+G++  ++E+E    Q++ S S +   VGI+
Sbjct: 340 SEVDYIEDITCVILMRFSHKLLHVDKN-LIGMDYHLEEMEEIFPQMMDSISNDVRMVGIY 398

Query: 189 GIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--------------------G 228
           G+GGIGKTTIA  +Y+ IS+ F  + F+ N +++S+  G                     
Sbjct: 399 GLGGIGKTTIAKVLYNRISAQFMITTFIANAKEDSKSQGLLHLQKQLLHDILPRRKNFIS 458

Query: 229 LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
             +  ++  + RL   KVL+V  D+ DL Q++ L G  + F PGSR+I+TTRD  LL+ H
Sbjct: 459 TVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGSRIIVTTRDKHLLEVH 518

Query: 289 RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
               V  ++E K+L + + + LF  NAF QNHP   +  +SN V+ Y NG+PL L+VLG 
Sbjct: 519 E---VDTLYEAKKLYHKEVVELFCWNAFKQNHPKEEYETVSNFVVHYVNGLPLGLKVLGC 575

Query: 349 YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVM 408
           +L G +  +WES ++KL+  P+ +IQ VLK SYD LD   Q+IFLD ACFF G D+  V 
Sbjct: 576 FLYGKTIRQWESELHKLEWEPNQEIQCVLKRSYDELDCT-QHIFLDVACFFNGEDKDSVT 634

Query: 409 NFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
             L+AC+F A+ G+  L  K L++I +NKI MHDLLQ+MG  IV QE  ++PGK SRLW 
Sbjct: 635 RILEACKFYAESGMRVLGDKCLISIVDNKIWMHDLLQQMGQHIVGQEFPEEPGKWSRLWF 694

Query: 469 P----EDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---------------- 508
           P    E I  +L  N S+P  I++ +     +   S LK + +                 
Sbjct: 695 PDVGTEAIKGIL-LNLSIPKPIHVTTESFAMMKNLSLLKIYSDYEFASMREHSKVKLSKD 753

Query: 509 ----SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
               S  +  L  +   +E LPSS      LV+LD+   S LK +      L+ L  + L
Sbjct: 754 FEFSSYELRYLYWQGYPLESLPSSF-YAEDLVELDMCY-SSLKQLWESDMLLEKLNTIRL 811

Query: 565 SGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           S C  L ++P+   +  +LE L L       K+  S+ +LSKL  L L+NCK+L+S 
Sbjct: 812 SCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNCKKLRSF 868



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 10/158 (6%)

Query: 486  INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDLDLTN 542
            IN+++L+ L L  CS LK+FP+I  N+E   +L L  TAIEELPSS+ +L+ LV LDL  
Sbjct: 872  INMEALEILNLSDCSELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKR 931

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
            C  LKS+ + +C L+SL  L  SGC KLE  PE + ++E+L+ L L     E +PSS+ +
Sbjct: 932  CKNLKSLPTSVCKLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDR 991

Query: 603  LSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            L  L  L L+NCK L SLP+  C         TSL+TL
Sbjct: 992  LKVLVLLNLRNCKNLVSLPKGMCT-------LTSLETL 1022



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 75/112 (66%), Gaps = 2/112 (1%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPS 61
           +S SSI+  P   +DVFLSF G+D  H F  HL  AL ++ + TF D ++L RG +I+P 
Sbjct: 11  ASFSSIS-TPGWNYDVFLSFMGEDTCHKFADHLYRALNQKGVRTFRDNEELGRGEDIAPE 69

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP 113
           L  AIE S+I +++  E YA S+WCL+EL KI++ + K  ++V P+FY V+P
Sbjct: 70  LLKAIEESRICLIVLLENYARSKWCLDELAKIMDCRQKMAKLVFPIFYHVEP 121



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 4/141 (2%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
            SLPT +  L+SL+ L+  GCS L+ FPE+  ++E+L    L  T+IE LPSSI  L  LV
Sbjct: 937  SLPTSVCKLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLV 996

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L+L NC  L S+   +C L SL  L +SGC +L  LP+ +G+L+ L   +       + 
Sbjct: 997  LLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQP 1056

Query: 597  PSSMKQLSKLSDLRLQNCKRL 617
            P S+  L  L  L    CKRL
Sbjct: 1057 PDSIVLLRNLKVLIYPGCKRL 1077



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 86/142 (60%), Gaps = 5/142 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC---NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           L+ L  + L  C +L   P+IS    N+E L L   +++ ++  SIG LS+L+ L+L NC
Sbjct: 803 LEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNC 862

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L+S  S + N+++L  LNLS C +L+K P+  GN+E L  L LA    E++PSS++ L
Sbjct: 863 KKLRSFLS-IINMEALEILNLSDCSELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHL 921

Query: 604 SKLSDLRLQNCKRLQSLPELPC 625
           + L  L L+ CK L+SLP   C
Sbjct: 922 TGLVLLDLKRCKNLKSLPTSVC 943



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 91/198 (45%), Gaps = 31/198 (15%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE---TAIEELPSSIGNLSRL 535
             SLP G+  L SL+ L + GCS L   P+   +++ L       TAI + P SI  L  L
Sbjct: 1007 VSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNL 1066

Query: 536  VDLDLTNC-------------------SGLKSVSSRLCN----LKSLRRLNLSGCLKLE- 571
              L    C                   +G   +S RL +      S   L+LS C  +E 
Sbjct: 1067 KVLIYPGCKRLAPTSLGSLFSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEG 1126

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
             +P  I +L SL+ L+L+  DF   P+ + +L+ L DLRL   + L  +P+LP     IH
Sbjct: 1127 AIPNSICSLISLKKLDLSRNDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIH 1186

Query: 631  ARHCTSLKTLSNSSTLLT 648
              +CT+L  L   S+L T
Sbjct: 1187 PHNCTAL--LPGPSSLRT 1202


>gi|297794589|ref|XP_002865179.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311014|gb|EFH41438.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1113

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 253/748 (33%), Positives = 383/748 (51%), Gaps = 119/748 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF+SFRG D+RHNF++H    L R+ I TF D ++ +G  + P L+ AI GSKI++V
Sbjct: 6   QYDVFISFRGDDLRHNFLAHFRKELDRKLIRTFNDMEIEKGESLDPVLTQAIRGSKIAVV 65

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-IFDIPT- 132
           +FS+ YASS WCLNEL++I++ K + GQ+V+P+F+ VDPS   +   +G  G IF+    
Sbjct: 66  LFSKNYASSGWCLNELLEIVKCKKEIGQLVIPIFHGVDPSHVRH--QIGDFGSIFEKTCR 123

Query: 133 -----------------------------SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                                        +E+  IE  VND+   +  L PS + +  VG
Sbjct: 124 RHSEEVKNQWKKALTEVANMVGTHLQNWDNEAKQIEYIVNDLLGTVI-LTPSKDFEDTVG 182

Query: 164 VESIIKEIES--QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ---- 217
           +E  I +I     L   S E   VGIWG  GIGKTTIA A+YS  S  F+   F+     
Sbjct: 183 IEDHIAKISLILDLKFESKEVRRVGIWGPSGIGKTTIARALYSQHSHVFDVCVFLDIHFV 242

Query: 218 ----------NIRDESEKV----GGLANI---------HLNFERRRLSRMKVLIVFYDLT 254
                     N  D + K+      L+ I         HL     RL   KVLIV  DL 
Sbjct: 243 SKSTKNYRKGNPDDYNMKLCLQKSFLSKILDQKDIEVEHLGVIEERLKHQKVLIVLDDLD 302

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           D   +D L+G+ + F  GSR+I+ T+D +LL+ H    + H++EV   S   +L +F  +
Sbjct: 303 DQMVLDTLVGKDEWFGCGSRIIVITKDKRLLEAHG---INHIYEVGFPSEKQALEMFCHS 359

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AFGQ  P  GF+EL+  V   A G+PL L++LG  +K    EEW+  +  L++  + DI 
Sbjct: 360 AFGQKSPDDGFVELATEVAARAGGLPLGLKILGKVMKNRKVEEWKGELLSLQKNQNGDIG 419

Query: 375 KVLKVSYDGLD-DEEQNIFLDTACFFKG---NDQYLVMNFLDACRFSAKIGISRLVGKSL 430
           K LKVSYD +D  + + IF   ACFF G   ++  L++  LD      + G+  LV KSL
Sbjct: 420 KTLKVSYDKIDIQKHRAIFRHIACFFNGAEIDNIKLMLPELD-----VETGVRHLVEKSL 474

Query: 431 VTIS---NNKIT--MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLP 483
           ++     NN  T  MH L+QEMG ++VR +S ++PG+R  L+  +D+  VL     T+  
Sbjct: 475 ISSKSSWNNTCTVDMHCLVQEMGKQLVRAQS-EEPGEREFLFDSDDVCNVLGGTNGTNKV 533

Query: 484 TGINLD--SLKELYL-----GGCSNLK----------RFPEISCNIED-----------L 515
            GI+LD   + EL +         NL+          R  E+  N+             L
Sbjct: 534 IGISLDLNEIDELEIHKKAFKNMHNLRFLRFHINSWEREKEVEWNLPKKIDAFPPKLKLL 593

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           +     +++LP+      +LV+L + N   L+ +     +LK L+ ++LSG L L+++P 
Sbjct: 594 NWPGYPMKQLPAEF-RPDKLVELRMPNSKILEKLWEGDKSLKFLKDMDLSGSLNLKEIP- 651

Query: 576 EIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR-- 632
           ++    +LE LNL       ++PSS+  L+KL+DL +  C  L++LP     S IH    
Sbjct: 652 DLSKATNLETLNLNGCSSLVELPSSILNLNKLTDLNMAGCTNLEALPTGKLESLIHLNLA 711

Query: 633 HCTSLKT---LSNSSTLLTRSSKHWDIF 657
            C+ LK    +SN  + L  +   ++IF
Sbjct: 712 GCSRLKIFPDISNKISELIINKTAFEIF 739



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 55/90 (61%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LP GINL SL  L L GCS L+ FP+IS NI  L L +TAIEE+PS I N S L  L++
Sbjct: 832 TLPIGINLKSLYRLNLNGCSQLRGFPDISNNITFLFLNQTAIEEVPSHINNFSSLEALEM 891

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
             C  LK +S  L  LK L  +  S C KL
Sbjct: 892 MGCKELKWISPGLFELKDLDEVFFSDCKKL 921



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 8/135 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA--IEELPSSIGNLSRLVDLDLTNC 543
           L +LK + L G  NLK  P +S   ++E L+L   +  +E   S+I NL++L  LD+  C
Sbjct: 768 LTNLKTIKLLGSENLKELPNLSMATSLETLNLNNCSSLVELTLSTIQNLNKLTSLDMIGC 827

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           S L+++   + NLKSL RLNL+GC +L   P+ I N  ++ +L L +   E++PS +   
Sbjct: 828 SSLETLPIGI-NLKSLYRLNLNGCSQLRGFPD-ISN--NITFLFLNQTAIEEVPSHINNF 883

Query: 604 SKLSDLRLQNCKRLQ 618
           S L  L +  CK L+
Sbjct: 884 SSLEALEMMGCKELK 898



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 14/147 (9%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTG  L+SL  L L GCS LK FP+IS  I +L + +TA E  PS +  L  LV+L L
Sbjct: 696 ALPTG-KLESLIHLNLAGCSRLKIFPDISNKISELIINKTAFEIFPSQL-RLENLVELSL 753

Query: 541 TNCSGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL--AEKDFE 594
            +     ++S RL      L +L+ + L G   L++LP  +    SLE LNL       E
Sbjct: 754 EH-----TMSERLWEGVQPLTNLKTIKLLGSENLKELP-NLSMATSLETLNLNNCSSLVE 807

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
              S+++ L+KL+ L +  C  L++LP
Sbjct: 808 LTLSTIQNLNKLTSLDMIGCSSLETLP 834


>gi|357499581|ref|XP_003620079.1| Resistance protein [Medicago truncatula]
 gi|355495094|gb|AES76297.1| Resistance protein [Medicago truncatula]
          Length = 667

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 197/525 (37%), Positives = 297/525 (56%), Gaps = 65/525 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           HDVFLSFRG D R++F+ +L+  LCR+ I TFIDD+ L  G+EI+PSL   IE ++I I 
Sbjct: 23  HDVFLSFRGSDTRYSFIGNLHKDLCRKGIRTFIDDRELKGGDEITPSLFKHIEETRIFIP 82

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           + S  YASS +CL+ELV I+    +  ++V+P+FY V+PS        Y  +L       
Sbjct: 83  VLSTNYASSSFCLDELVHIIHCFKESSRLVLPIFYDVEPSHVRHQHGSYAKALDDHIEKF 142

Query: 124 ------------WMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKD 159
                       W        +            E   IE  V  +S K++ + P    D
Sbjct: 143 QNNKNNMERLQKWKSALTQTANFSGHHFNPRNGYEYEFIEKIVKYVSSKINRV-PLYVAD 201

Query: 160 QLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG++S + ++ S L L  + E   +GI+G GG+GKTT+A A+Y++I+  F+G  F+ N
Sbjct: 202 YPVGLQSRVLKVNSFLDLRSNGEVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLHN 261

Query: 219 IRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
           +R+ S K G                   G  N  +   ++RL R KVL++  D+ +LKQ+
Sbjct: 262 VRENSAKYGLEHLQEKLLSKLVELDVKLGDVNEGIPIIKQRLHRKKVLLILDDVHELKQL 321

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +L GRLD F  GS+VIITT++ +LL  H   R    +E+ +L+  ++L L   NAF  N
Sbjct: 322 QVLAGRLDWFGLGSKVIITTQEKKLLDGHGIERA---YEIHKLNDKEALELLRWNAFKNN 378

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                F ++ +  + YA+G+PLAL+V+GS L G +  EW+SA+++ +R P   IQ++LKV
Sbjct: 379 KVDTNFDDILHQAVTYASGLPLALEVVGSNLFGKNIREWKSALSQYERRPIRKIQEILKV 438

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGKSLVTI----S 434
           S+D L+++E+N+FLD AC FKG +   + N L A   +     I  L  KSL+ I     
Sbjct: 439 SFDALEEDEKNVFLDIACCFKGYELKELENILHAHYGNCMNYQIRVLHDKSLIKIYWYLG 498

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
           N  +T+H L+++MG EIV ++S K+PG+RSRLW  +DI  VL EN
Sbjct: 499 NYVVTLHALIEKMGKEIVHEKSPKEPGRRSRLWFHKDIIHVLEEN 543


>gi|357500727|ref|XP_003620652.1| Elongation factor Ts [Medicago truncatula]
 gi|355495667|gb|AES76870.1| Elongation factor Ts [Medicago truncatula]
          Length = 2436

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 227/683 (33%), Positives = 354/683 (51%), Gaps = 92/683 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R+NF   L  AL  + I  F DD  L +G  + P L  AI+G ++ +V
Sbjct: 20  YDVFITFRGEDTRNNFTDFLFDALETKGIFAFRDDTNLQQGESLEPELLRAIKGFQVFVV 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSL------- 122
           +FS  YASS WCL EL KI E      + V+PVFY VDPS+       YC +        
Sbjct: 80  VFSRNYASSTWCLKELEKICECVKGSKKHVIPVFYDVDPSEVRKQSGIYCEAFVKHEKRF 139

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK--- 158
                                GW  + D P +      G +  I +K+ ++    +    
Sbjct: 140 QQGFEMVSRWREALKQVGSISGW-DLCDKPQA------GEIKKIVQKIMNILECKSSCVS 192

Query: 159 DQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
             LVG++S I+ +++ L+    +    + I G+GGIGKTT+A  +Y  IS  F  S F+ 
Sbjct: 193 KDLVGIDSPIEALKNHLVLDLVDGVRAIRICGMGGIGKTTLAMNLYGQISHRFSASCFID 252

Query: 218 NIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDL 256
           ++        G  +                       ++  +RRL R K L++F ++  +
Sbjct: 253 DVSKIYRLYDGPIDAQKQILHQTLGIEHHQICNRYSAIDLIQRRLRREKALLIFDNVDQV 312

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q++ +    +    GSR+II +RD  +LK +    V  V++V+ L++ +S  LF R AF
Sbjct: 313 EQLEKIGVHRECLGAGSRIIIISRDEHILKEYE---VDVVYKVQLLNWTESHKLFCRKAF 369

Query: 317 -GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
             +    + +  L+N ++ YA+G+PLA++VLGS+L G +  EW+SA+ KL+  P+ D+  
Sbjct: 370 KAEKIIMSNYQNLANKILNYASGLPLAIKVLGSFLFGRNVTEWKSALAKLRESPNKDVMD 429

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           VL++S+DGL+  E+ IFLD AC F   D   V N L+ C F+A IGI  L+ KSL++I+ 
Sbjct: 430 VLQLSFDGLEKTEKQIFLDIACLFNCLDMEYVKNILNCCGFNADIGIRVLIDKSLISING 489

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT-GINLDSLKEL 494
             I MH LL+E+G +IV++ S K+P K SRLW  + +Y V  EN       I L   +E+
Sbjct: 490 QNIEMHSLLKELGRKIVQKTSSKEPRKWSRLWSAKQLYDVKMENMEKNVEAILLKRNEEV 549

Query: 495 ---YLGGCSNLKRFPEISCN-------------IEDLDLKETAIEELPSSIGNLSRLVDL 538
              +L   SNL R   I CN             +  +D  E   + LP+S  + + LV+L
Sbjct: 550 DVEHLSKMSNL-RLLIIKCNWNISGGSNFLSNELRYVDWHEYPFKYLPTSF-HPNELVEL 607

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
            L  CS +K +      L++LR+L+L G + LEK+  + G   +LE+L+L   K+  ++ 
Sbjct: 608 ILW-CSNIKQLWKNKKYLRNLRKLDLMGSINLEKII-DFGEFPNLEWLDLELCKNLVELD 665

Query: 598 SSMKQLSKLSDLRLQNCKRLQSL 620
            S+  L KL  L L  CK+L  L
Sbjct: 666 PSIGLLRKLVYLNLGGCKKLVEL 688



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 225/710 (31%), Positives = 355/710 (50%), Gaps = 87/710 (12%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
            +DVF++FRG+D R+NF+  L  AL  + I  F D++ L +G  I P L  +IEGS++ + 
Sbjct: 1382 YDVFVTFRGEDTRNNFIDFLFDALETKGILVFRDNRNLQKGESIGPELLQSIEGSQVYVA 1441

Query: 75   IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS---------DAGYCP----- 120
            +FS  YA S WCL E+ KI E      ++V+PVFY VDPS         D  +       
Sbjct: 1442 VFSRNYAFSTWCLQEIEKIWECVQGSEKLVLPVFYDVDPSEVRKQSGIYDKAFVKHEQRF 1501

Query: 121  ---------------SLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK---DQLV 162
                            +G +  +D+     V   G +  I +++ ++   ++      LV
Sbjct: 1502 QQNSQMVSRWREALKQVGSISGWDLCDKPQV---GEIKKIVQRIMNILECNSSCVSKDLV 1558

Query: 163  GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
            G++S I+ +++ LL  S +  + +GI G+GGIGKTT+A  +Y  IS  F  + F+ ++  
Sbjct: 1559 GIDSPIEALQNHLLLDSVDGVHAIGICGMGGIGKTTLAMTLYDQISHRFSANCFIDDVSK 1618

Query: 222  ESEKVGGLAN---------------------IHLNFERRRLSRMKVLIVFYDLTDLKQID 260
                  G  +                     I  +  RRRLSR K L++  ++   +Q +
Sbjct: 1619 IYRLCDGPLDAQKQILFQTLDIKHHQICNRYIATDLIRRRLSREKTLVILDNVDQGEQSE 1678

Query: 261  LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
             +    +    GSR+II +RD  +LK +    V  V++V  L+  DS  LF + AF    
Sbjct: 1679 KIAVHREWLGAGSRIIIISRDEHILKEYG---VDVVYKVPLLNRTDSHKLFCQKAFKHEK 1735

Query: 321  P-AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
               + +  L   ++ YANG+PLA++VLGS+L G +  EW+SA+ +L+  P  D+  VL++
Sbjct: 1736 IIMSSYQNLDFEILSYANGLPLAIKVLGSFLFGRNVTEWKSALARLRERPDNDVMDVLQL 1795

Query: 380  SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKI 438
            S+DGL+  E+ IFLD ACFF    +  V N L+ C F A IG+  L+ KSL++I S++ I
Sbjct: 1796 SFDGLNHMEKEIFLDIACFFNRESEKYVKNVLNHCGFHADIGLRVLIDKSLISINSDSVI 1855

Query: 439  TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGI------------ 486
             MH LL E+G +IVR+ S K+  K SR+W  + +Y V  E                    
Sbjct: 1856 EMHSLLVELGRKIVRENSSKEQRKWSRVWSQKQLYNVTMEKMERHVEAIVLNDDDVEEVD 1915

Query: 487  -----NLDSLKELYLGGCSNLKRFP-EISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
                  + +L+ L +    N+   P  +S  +  ++      + LPSS  + S LV+L L
Sbjct: 1916 VEQLSKMSNLRLLIIKWGPNIPSSPSSLSNTLRYVEWNYYPFKYLPSSF-HPSDLVELIL 1974

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSS 599
               S +K +      L +LRRL+L     LEK+  + G   +LE+LNL    +  ++  S
Sbjct: 1975 MY-SDIKQLWKNKKYLPNLRRLDLRHSRNLEKIV-DFGEFPNLEWLNLELCANLVELDPS 2032

Query: 600  MKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARH-CTSLKTLSNSSTLL 647
            +  L KL  L L+ C  L S+P    G SS+   + C   K  S+SS +L
Sbjct: 2033 IGLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGCSKAFSSSSIML 2082



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 90/201 (44%), Gaps = 43/201 (21%)

Query: 471  DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSI 529
            DI Q+      LP    LD      L    +   FP    N+E L+L+  A + EL  SI
Sbjct: 1978 DIKQLWKNKKYLPNLRRLDLRHSRNLEKIVDFGEFP----NLEWLNLELCANLVELDPSI 2033

Query: 530  GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK-------------------- 569
            G L +LV L+L  C  L S+ + +  L SL  LN+ GC K                    
Sbjct: 2034 GLLRKLVYLNLEGCVNLVSIPNNISGLSSLEDLNICGCSKAFSSSSIMLPTPMRNTYLLP 2093

Query: 570  -----------------LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
                             L ++P+ I  L SLE LNL   DF  +PS +++LSKL  L L+
Sbjct: 2094 SVHSLNCLRKVDISFCHLNQVPDSIECLHSLEKLNLGGNDFVTLPS-LRKLSKLVYLNLE 2152

Query: 613  NCKRLQSLPELPCGSSIHARH 633
            +CK L+S P+LP  ++I   H
Sbjct: 2153 HCKFLKSFPQLPSLTTIGRDH 2173



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 35/140 (25%)

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK-------------- 569
           EL  SIG L +LV L++ +C  L S+ + + +L SL  LN++GC K              
Sbjct: 687 ELDPSIGLLRKLVCLNVKDCENLVSIPNNIFDLSSLEYLNMNGCSKVFNNSLPSPTRHTY 746

Query: 570 --------------------LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
                               L ++P+ I +L  LE LNL   +F  +P S+++LS+L  L
Sbjct: 747 LLPSLHSLDCLRGVDISFCNLSQVPDAIEDLHWLERLNLKGNNFVTLP-SLRKLSELVYL 805

Query: 610 RLQNCKRLQSLPELPCGSSI 629
            L++CK L+SLP+LP  ++I
Sbjct: 806 NLEHCKLLESLPQLPSPTTI 825


>gi|356542395|ref|XP_003539652.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1396

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 248/723 (34%), Positives = 356/723 (49%), Gaps = 104/723 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG   R+ F + L  AL ++ I TF D ++L  G +I P+L  AIE S++S+V
Sbjct: 16  YDVFLSFRG-GTRYGFTNRLYNALRQKGIYTFRDTEELRIGADIRPALLKAIENSRMSMV 74

Query: 75  IFSEGYASSRWCLNELVKILES--KNKYGQIVVPVFYLVDPSDAG--------------- 117
           +  E YASS WCL+EL KI++    NK  Q+++ +FY V PSD                 
Sbjct: 75  VLCEDYASSTWCLDELAKIIQCYHANKPKQVLL-IFYKVQPSDVWDQKNSYAKAMADHEN 133

Query: 118 -------------------------YCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDL 152
                                    YC   G+         E+ LI+  V D S KL  +
Sbjct: 134 RFAKQPEKVKNWRKALSQLRHLTREYCKDDGY---------EAELIKKIVKDTSAKLPPI 184

Query: 153 FPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            P   K  +VG++S   +++S + +        + I+G GGIGKTT A  IY+NI   FE
Sbjct: 185 -PLPIK-HVVGLDSRFLDVKSMIHIESHDTVLILEIYGAGGIGKTTFALDIYNNIRHEFE 242

Query: 212 GSYFMQNIRDESEK-VGGLANIHLNFE---------------RRRLSRMKVLIVFYDLTD 255
            + F+ N+R++S K   GL ++                    +RRL   KVL+V  D+  
Sbjct: 243 AASFLANVREKSNKSTEGLEDLQKTLLSEMGEETEIIGASEIKRRLGHKKVLLVLDDVDS 302

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR-GSRVGHVFEVKELSYNDSLTLFSRN 314
            KQ++ L+G  D F   SR+IITTRD  LL  H     V   +E+K L+Y DSL LF  +
Sbjct: 303 TKQLESLVGGGDWFGSRSRIIITTRDTTLLDEHVIDDVVIETYEMKALNYGDSLELFCWH 362

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF  + PA  F  +SN  ++YA G PLAL+V+GS LKG S ++WE  + K K +P+  IQ
Sbjct: 363 AFNMSKPAENFEGVSNDAVRYAKGHPLALKVIGSNLKGGSLKDWEMELEKYKMIPNAKIQ 422

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
           +VL++SY  LD  +Q IFLD ACFFKG  +  V   L AC F   IG+     K L+TI 
Sbjct: 423 EVLEISYHSLDVLDQKIFLDIACFFKGERRGYVERILKACDFCPSIGV--FTAKCLITID 480

Query: 435 NNK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSL 491
            +  + MHDL+Q+MG EIVR+ES  + G RSRLW  E++ +VL EN  ++   GI LD  
Sbjct: 481 EDGCLDMHDLIQDMGREIVRKESSINAGDRSRLWSHEEVLRVLIENSGSNRIEGIMLDPP 540

Query: 492 KELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLV------------DLD 539
               +     +    E   N+  L ++ T     PS + N  RL+            D  
Sbjct: 541 SHEKVD--DRIDTAFEKMENLRILIIRNTTFSTAPSYLPNTLRLLEWKGYPSKSFPPDFY 598

Query: 540 LTNCSGLKSVSSRLCNLKSLRR------LNLSGCLKLEKLPEEIGNLESLEYLNLAE--- 590
            T     K   S L   KS ++      +NLS C  + ++P+  G + +L+ L L +   
Sbjct: 599 PTKIVDFKLNHSSLMLEKSFKKYEGLTFINLSQCQSITRIPDVSGAI-NLKVLTLDKCRK 657

Query: 591 -KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
            K F+K    M+ L  +S LR    K       LP    +    C+ L+   +    + R
Sbjct: 658 LKGFDKSIGFMRNLVYVSALRCNMLKSFVPSMSLPSLEVLSFSFCSRLEHFPDVMEEMDR 717

Query: 650 SSK 652
             K
Sbjct: 718 PLK 720



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 43/203 (21%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD------LKETAIEELPSSIGNLSR 534
           S    ++L SL+ L    CS L+ FP++   +E++D      L  TAI+E P SIG L+ 
Sbjct: 684 SFVPSMSLPSLEVLSFSFCSRLEHFPDV---MEEMDRPLKIQLVNTAIKEFPMSIGKLTG 740

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC--------------------------- 567
           L  LD++ C  L ++S +L  L  L  L + GC                           
Sbjct: 741 LEYLDISGCKKL-NISRKLFLLPKLETLLVDGCSHIGQSFKRFKERHSMANGCPNLRTLH 799

Query: 568 -----LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                L  E+L   +     LE L ++  DF  +P  +K   +L  L +  CK L S+PE
Sbjct: 800 LSETNLSNEELYAILKGFPRLEALKVSYNDFHSLPECIKDSKQLKSLDVSYCKNLSSIPE 859

Query: 623 LPCG-SSIHARHCTSLKTLSNSS 644
           LP     ++AR+C  L + +++S
Sbjct: 860 LPPSIQKVNARYCGRLTSEASNS 882


>gi|15237409|ref|NP_199438.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177707|dbj|BAB11081.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007977|gb|AED95360.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1205

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 244/737 (33%), Positives = 364/737 (49%), Gaps = 110/737 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG DVR  F SH      R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSRNWL----YDVFLSFRGGDVRVTFRSHFLKEFDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   I++PVFY VDPS   Y  
Sbjct: 57  DLEQAIKESRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IIIPVFYGVDPSQVRY-- 111

Query: 121 SLGWMG-IFDIPTS------------------------------ESVLIEGNVNDISKKL 149
            +G  G IF+                                  E+ +IE   ND+ +KL
Sbjct: 112 QIGEFGKIFEKTCKRQTEEVKNQWKKALTHVANMLGFDSSKWDDEAKMIEEIANDVLRKL 171

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
             L  S + +  VG+E  I  + + L   S E   VGIWG  GIGKTTIA A+++N+  H
Sbjct: 172 L-LTTSKDFEDFVGLEDHIANMSALLDLESKEVKMVGIWGSSGIGKTTIARALFNNLFRH 230

Query: 210 FEGSYFM-QNIRDESEKVGGLANI--------------------------HLNFERRRLS 242
           F+   F+ ++   +S ++   AN                           HL     RL 
Sbjct: 231 FQVRKFIDRSFAYKSREIHSSANPDDHNMKLHLQESFLSEILRMPNIKIDHLGVLGERLQ 290

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             KVLI+  D+ D   +D L+G+   F  GSR+I+ T +   L  H   R   ++EV   
Sbjct: 291 HQKVLIIIDDVDDQVILDSLVGKTQWFGNGSRIIVVTNNKHFLTAHGIDR---MYEVSLP 347

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           +   +L +  ++AF +  P  GF  L   V +YA  +PL L+VLGSYL G  +E W   +
Sbjct: 348 TEEHALAMLCQSAFKKKSPPEGFEMLVVQVARYAGSLPLVLKVLGSYLSGKDKEYWIDML 407

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
            +L+   +  I+++L++SYDGL+ E+Q IF   AC F   +   + + L    + A +G+
Sbjct: 408 PRLQNGLNDKIERILRISYDGLESEDQAIFRHIACIFNHMEVTTIKSLLANSIYGANVGL 467

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--NT 480
             LV KS++ +    + MH LLQEMG +IVR +SI  P KR  L  P DI  VL+E  +T
Sbjct: 468 QNLVDKSIIHVRWGHVEMHPLLQEMGRKIVRTQSIGKPRKREFLVDPNDICDVLSEGIDT 527

Query: 481 SLPTGINLDSLK-------ELYLGGCSNLKRFPEISCNI----EDLDLKETAIEELPSSI 529
               GI+L++ K       E       NL RF +I  +I      L L E + + LP ++
Sbjct: 528 QKVLGISLETSKIDELCVHESAFKRMRNL-RFLKIGTDIFGEENRLHLPE-SFDYLPPTL 585

Query: 530 GNL----------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             L                  LV L +TN S L  +      L  L+ ++L G + L+++
Sbjct: 586 KLLCWSEFPMRCMPSNFCPKNLVTLKMTN-SKLHKLWEGAVPLTCLKEMDLDGSVNLKEI 644

Query: 574 PE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSS 628
           P+     NLE+L + N   K   ++PS ++ L+KL  L +  C  L++LP    L   + 
Sbjct: 645 PDLSMATNLETLNFENC--KSLVELPSFIQNLNKLLKLNMAFCNSLETLPTGFNLKSLNR 702

Query: 629 IHARHCTSLKTLSNSST 645
           I    C+ L+T  + ST
Sbjct: 703 IDFTKCSKLRTFPDFST 719



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 53/87 (60%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L   GCS L+ FPEIS NI  L+L+ET IEE+P  I   S L  L +
Sbjct: 813 TLPTGINLQSLDSLSFKGCSRLRSFPEISTNISSLNLEETGIEEVPWWIDKFSNLGLLSM 872

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGC 567
             CS LK VS  +  LK L +++   C
Sbjct: 873 DRCSRLKCVSLHISKLKRLGKVDFKDC 899



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 79/153 (51%), Gaps = 12/153 (7%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL-- 538
           +LPTG NL SL  +    CS L+ FP+ S NI DL L  T IEELPS++ +L  L+DL  
Sbjct: 690 TLPTGFNLKSLNRIDFTKCSKLRTFPDFSTNISDLYLTGTNIEELPSNL-HLENLIDLRI 748

Query: 539 -----DLTNCSG-LKSVSSRLCNLK-SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
                D     G +K +   L  L  +L  L L     L +LP    NL  LE L++   
Sbjct: 749 SKKEIDGKQWEGVMKPLKPLLAMLSPTLTSLQLQNIPNLVELPCSFQNLIQLEVLDITNC 808

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           ++ E +P+ +  L  L  L  + C RL+S PE+
Sbjct: 809 RNLETLPTGI-NLQSLDSLSFKGCSRLRSFPEI 840


>gi|10177708|dbj|BAB11082.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1145

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 246/735 (33%), Positives = 362/735 (49%), Gaps = 107/735 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG DVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSRNWL----YDVFLSFRGGDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-- 118
            L  AI+ S+I++VIFS+ YASS WCLNEL++I+   +K   IV+PVFY VDPS   +  
Sbjct: 57  DLEQAIKDSRIAVVIFSKNYASSSWCLNELLEIVNCNDK---IVIPVFYGVDPSQVRHQI 113

Query: 119 -------------------------CPSLGWMGIFDIPT--SESVLIEGNVNDISKKLSD 151
                                       +  M  FD  T   E+ +IE   ND+  KL  
Sbjct: 114 GDFGKIFEKTCKRQTEQVKNQWKKALTDVANMLGFDSATWDDEAKMIEEIANDVLAKLLL 173

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
             P D ++  VG+E  I  +   L   + E   VGIWG  GIGKTTIA A+++ +S HF 
Sbjct: 174 TTPKDFEN-FVGIEDHIANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFP 232

Query: 212 GSYFM---------------------------QNIRDESEKVGGLANIHLNFERRRLSRM 244
            S F+                           + +  E  ++  +   HL     RL   
Sbjct: 233 VSKFIDRAFVYKSREIFSRANPDDHNMKLHLQEKLLSEILRMPDIKIDHLGVLGERLQHQ 292

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KVLI+  DL D   +D L+G+   F  GSR+I  T +   L+ H    + H++EV   + 
Sbjct: 293 KVLIIVDDLDDQVILDSLVGQTQWFGSGSRIIAVTNNKHFLRAH---EIDHIYEVSLPTQ 349

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
             +L +  ++AF +  P  GF  L   V ++ + +PL L VLGSYL+G  +E W   + +
Sbjct: 350 QHALAMLCQSAFRKKSPPEGFEMLVVQVARHVDSLPLGLNVLGSYLRGRDKEYWMEMLPR 409

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           L+   H  I+K+L++SYDGL  EE + IF   AC F   +   + + L        IG+ 
Sbjct: 410 LENGLHDKIEKILRISYDGLGSEEDKAIFRHIACLFNHMEVTTITSLL--TDLGINIGLK 467

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--NTS 481
            LV KS++ +    + MH +LQEMG +IVR +SI  PGKR  L  P DI  VL+E   T 
Sbjct: 468 NLVDKSIIHVRRGCVEMHRMLQEMGRKIVRTQSIDKPGKREFLVDPNDISDVLSEGIGTQ 527

Query: 482 LPTGINLDS--LKELYL-----GGCSNLKRFPEISC----NIEDLDLKETAIEELPSSIG 530
              GI+L++  + ELY+      G SNL RF EI          L L E +++ LP  + 
Sbjct: 528 KVLGISLNTGEIDELYVHESAFKGMSNL-RFLEIDSKNFGKAGRLYLPE-SLDYLPPRLK 585

Query: 531 NL----------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L                  LV L + N S L  +   + +L  L+ +++ G   L+++P
Sbjct: 586 LLCWPNFPMRCMPSNFRPENLVTLKMPN-SKLHKLWEGVASLTCLKEMDMVGSSNLKEIP 644

Query: 575 EEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIH 630
            ++    +LE L L   K   ++PSS++ L+KL  L ++ C  L+ LP    L     ++
Sbjct: 645 -DLSMPTNLEILKLGFCKSLVELPSSIRNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLN 703

Query: 631 ARHCTSLKTLSNSST 645
            R+C+ L+T    ST
Sbjct: 704 FRYCSELRTFPEFST 718



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/90 (47%), Positives = 56/90 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L   GCS L+ FPEIS NI  L+L+ET IEE+P  I N   L  L +
Sbjct: 808 TLPTGINLKSLNYLCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTKLTM 867

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
            +CS LK +S  +  +K+L  ++ S C  L
Sbjct: 868 RSCSKLKCLSLNIPKMKTLWDVDFSDCAAL 897



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 98/215 (45%), Gaps = 42/215 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPTG NL SL  L    CS L+ FPE S NI  L L  T IEE P    NL  LV+L L+
Sbjct: 690 LPTGFNLKSLDHLNFRYCSELRTFPEFSTNISVLMLFGTNIEEFP----NLENLVELSLS 745

Query: 542 -------NCSGLKSVSSRLCNLK-SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
                     G+K ++  L  L  +L+ L L     L +LP    NL  L+ L++   ++
Sbjct: 746 KEESDGKQWDGVKPLTPFLEMLSPTLKSLKLENIPSLVELPSSFQNLNQLKELSITYCRN 805

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI----------------------- 629
            E +P+ +  L  L+ L  + C +L+S PE+    S+                       
Sbjct: 806 LETLPTGI-NLKSLNYLCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTK 864

Query: 630 -HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
              R C+ LK LS +   + +    WD+ +FS+C+
Sbjct: 865 LTMRSCSKLKCLSLN---IPKMKTLWDV-DFSDCA 895


>gi|357499327|ref|XP_003619952.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494967|gb|AES76170.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1075

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 242/672 (36%), Positives = 351/672 (52%), Gaps = 78/672 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG D +  F  +L  AL  + I TFIDDK L +G+EI+PSL  +IE S+I+I+
Sbjct: 169 YDVFISFRGTDTQFGFTGNLYKALSDKGINTFIDDKELKKGDEITPSLLKSIEESRIAII 228

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSLG------ 123
           +FS+ YASS +CL+ELV I+   N+ G  V+PVFY  +PS        Y  +L       
Sbjct: 229 VFSKEYASSLFCLDELVHIIHCSNEKGSKVIPVFYGTEPSHVRKLNDSYGEALAKHEDQF 288

Query: 124 --------WMGIFDIPTSESV----------------LIEGNVNDISKKLSDLFPSDNKD 159
                   W+  +    +++                  IE  V D+S K++ + P    D
Sbjct: 289 QNSKENMEWLLKWKKALNQAANLSGHHFNLGNEYERDFIEKIVTDVSYKINHV-PLHVAD 347

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
            LVG++S I E+ S L  GST+    +GI G  G+GKT +A AIY+ IS+ FE   F+ N
Sbjct: 348 YLVGLKSRISEVNSLLDLGSTDGVCIIGILGTEGMGKTKLAQAIYNLISNQFECLCFLHN 407

Query: 219 IRDESEKVGGLANIHLNF-ERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVII 277
           +R+ S K G      L + + + LS+       +   + + I +LIG+      GSRVII
Sbjct: 408 VRENSVKHG------LEYLQEQILSKSIGFETKFGHVN-EGIPVLIGQAGWLGRGSRVII 460

Query: 278 TTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYAN 337
           TTRD QLL +H    +   +E   L+   +L L    AF      + +  + N  +KYA+
Sbjct: 461 TTRDKQLLSSHG---IKFFYEAYGLNKEQALELLRTKAFKSKKNDSSYDYILNRAVKYAS 517

Query: 338 GVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTAC 397
           G+PLAL+V+GS L G S  E ES ++K  R+PH DIQK+LKVSYD LD+E+Q++FLD AC
Sbjct: 518 GLPLALEVVGSNLFGKSIAECESLLDKYDRIPHEDIQKILKVSYDALDEEQQSVFLDIAC 577

Query: 398 FFKGNDQYLVMNFL-DACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQE 455
           FFK   +  V   L D   +  K  I  LV KSL+ IS    +T+HDL+++MG EIVRQE
Sbjct: 578 FFKERRKEFVQEVLHDHYGYCIKSHIGVLVDKSLIKISFYGGVTLHDLIEDMGIEIVRQE 637

Query: 456 SIKDPGKRSRLWHPEDIYQVLNENTSLPT-----GINLDSLKELYLGGCSNLKRFPEISC 510
           S   PG+RSRLW  +DI  VL +N    T      I  D+LK L +      K    I  
Sbjct: 638 SRNKPGERSRLWCHDDIVHVLQKNIVTMTLLFLHLITYDNLKTLVIKSGQFSKSPMYIPS 697

Query: 511 NIEDLDLKETAIEELPSSI--GNLSRLVDLDLTNCSGLKSVS--SRLCNLK--SLRRL-- 562
            +  L  +  +++ L SSI     + +  L L +C  L  +   S L N +  S ++L  
Sbjct: 698 TLRVLIWERYSLKSLSSSIFSEKFNYMKVLTLNHCHYLTHIPDVSGLSNFEKFSFKKLIS 757

Query: 563 ----------NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
                     NLS     E LP  +    +++ L L+  +F+ +P  +     L  L L 
Sbjct: 758 NVDHVLLNQSNLSD----ECLPILLKWCANVKLLYLSGNNFKILPECLSVCHLLRILNLD 813

Query: 613 NCKRLQSLPELP 624
            CK L+ +  +P
Sbjct: 814 ECKALEEIRGIP 825


>gi|356561221|ref|XP_003548881.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1126

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 242/703 (34%), Positives = 357/703 (50%), Gaps = 104/703 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFR +D RH F  +L   L    I TFIDD +  + ++I+ +L  AI+ SKI I+
Sbjct: 8   YDVFLSFRREDTRHGFTGNLYNVLRERGIHTFIDDDEPQKADQITKALEEAIKNSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVV-PVFYLVDPSDAGY--------------- 118
           + SE YASS +CLNEL  IL     +  ++V PVFY VDPSD  +               
Sbjct: 68  VLSENYASSFFCLNELTHILNFTKGWDDVLVLPVFYKVDPSDVRHHRGSFGEALANHEKN 127

Query: 119 --CPSLGWMGIFDIPTSESVLIEGN-------------VNDISKKLSDLFPSDN---KDQ 160
                +G +  + +   +     G+             + +I + +S+    D+    D 
Sbjct: 128 LNSNYMGKLKTWKMALRQVSNFSGHHFQPDGNKYEYKFIKEILESVSNKLNGDHLYVSDV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG+ES + E++  L  G  +  + VGI G+ G+GKTT+A A+Y++I  HFE S F++N+
Sbjct: 188 LVGLESPLLEVKELLDVGRDDVVHMVGIHGLPGVGKTTLAVAVYNSIVDHFEASCFLENV 247

Query: 220 RDESEKVGGL-----------ANIHLNFER-------RRLSRMKVLIVFYDLTDLKQIDL 261
           R+ S K G +             I L   R       R+L + KVL++  D+ + KQ+  
Sbjct: 248 RETSNKNGLVHLQSVLLSKTDGEIKLANSREGSTIIQRKLKQKKVLLILDDVDEHKQLQA 307

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-QNH 320
           +IG  D F  GSRVIITTRD  LL  H+   V   +EV+EL+   +L L ++ AF  +  
Sbjct: 308 IIGNPDWFGRGSRVIITTRDEHLLALHK---VKITYEVRELNKKHALQLLTQKAFELEKE 364

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
               + ++ N  I YA+G+PLAL+V+GS L G S EEWESA++  +R+P   I  +LKVS
Sbjct: 365 VDPSYHDILNRAITYASGLPLALEVMGSNLFGKSIEEWESALDGYERIPDKKIYDILKVS 424

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAKIGISRLVGKSLVTI--- 433
           YD L+++E++IFLD AC FK  +   V + L A    C    K  I  LV KSL+ I   
Sbjct: 425 YDALNEDEKSIFLDIACGFKDYELTYVQDILYAHYGRC---MKYHIGVLVKKSLINIHCW 481

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGINLD 489
               + +HDL+++MG EIVR+ES  +PGKRSRLW  EDI QVL EN          +N  
Sbjct: 482 PTKVMRLHDLIEDMGKEIVRRESPTEPGKRSRLWSHEDINQVLQENKGTRKIEIICMNFS 541

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV 549
           S  E         K+      N++ L +K     + P  + N  R+++            
Sbjct: 542 SFGEEVEWDGDGFKKME----NLKTLIIKSDCFSKGPKHLPNTLRVLEW----------- 586

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
            SR  + +  R  N    L + KLP       S+  L LA       P   K+L  L+ L
Sbjct: 587 -SRCPSQEWPRNFNPKQ-LAICKLPH-----SSITSLRLA-------PLFKKRLVNLTSL 632

Query: 610 RLQNCKRLQSLPELPCGSSIH---ARHCTSLKTLSNSSTLLTR 649
            L  C   + +P++ C S++     R C +L T+ +S  LL +
Sbjct: 633 ILDECDSFRWIPDVSCLSNLENLSFRKCRNLFTIHHSVGLLEK 675



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 5/127 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L +L  L L  C + +  P++SC  N+E+L  ++   +  +  S+G L +L  LD   C 
Sbjct: 626 LVNLTSLILDECDSFRWIPDVSCLSNLENLSFRKCRNLFTIHHSVGLLEKLKILDAAGCP 685

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS       L SL R   SGC  L+  PE +G +E++  L+       K+P S + L+
Sbjct: 686 KLKSFPP--LKLTSLERFEFSGCYNLKSFPEILGKMENMTQLSWTGCAITKLPPSFRNLT 743

Query: 605 KLSDLRL 611
           +L  L L
Sbjct: 744 RLQLLVL 750



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 35/173 (20%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SL+     GC NLK FPEI   +E+   L     AI +LP S  NL+RL  L LT 
Sbjct: 693 LKLTSLERFEFSGCYNLKSFPEILGKMENMTQLSWTGCAITKLPPSFRNLTRLQLLVLTT 752

Query: 543 CSGL----KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL--------------- 583
                    ++ S +C +  L +++ +G L+   LP+++  L S+               
Sbjct: 753 FIKYDFDAATLISNICMMPELNQIDAAG-LQWRLLPDDVLKLTSVVCSSVQSLTLELSDE 811

Query: 584 ------------EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                       + LNL+   F  IP  +K+   L+ L L  C RLQ +  +P
Sbjct: 812 LLPLFLSCFVNVKKLNLSWSKFTVIPECIKECRFLTTLTLDYCYRLQEIRGIP 864


>gi|357452805|ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1406

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 239/749 (31%), Positives = 355/749 (47%), Gaps = 121/749 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+ VF+SFRG D R++FV HL A L R+ I  F DDK L +G  ISP L  AI  S+I I
Sbjct: 256 KYGVFISFRGPDTRNSFVDHLYAHLTRKGIFAFKDDKSLEKGEFISPQLLQAIRNSRIFI 315

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG---------------- 117
           V+FS+ YA S WCL E+  I +    + Q V P+FY VDPSD                  
Sbjct: 316 VVFSKTYAESTWCLEEMAAIADCCEYFKQTVFPIFYDVDPSDVRKQSGVYQNDFVLHKKK 375

Query: 118 ----------YCPSLGWMGI---FDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     +  ++G +     +D+    E   IE  V ++ K L   F S   D L+ 
Sbjct: 376 FTRDPDKVVRWTKAMGRLAELVGWDVRNKPEFREIENIVQEVIKTLGHKF-SGFADDLIA 434

Query: 164 VESIIKEIES--QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
            +  ++E+ES  +L S   E   VGIWG+ GIGKTT+AS +Y  ISS F+ S F++N+  
Sbjct: 435 TQPRVEELESLLKLSSDDDELRVVGIWGMAGIGKTTLASVLYDRISSQFDASCFIENV-S 493

Query: 222 ESEKVGGLANIHLNF---------------------ERRRLSRMKVLIVFYDLTDLKQID 260
           +  + GG  ++                          R+RL   K L+V  ++  L+Q++
Sbjct: 494 KIYRDGGAVSLQKQILRQTIDEKYLETYSPSEISGIVRKRLCNRKFLVVLDNVDLLEQVE 553

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNH-------RGSRVGHVFEVKELSYNDSLTLFSR 313
            L    +    GSR+IITTR++ +L+ +        G+ V   +EV  L+ ND+  LF R
Sbjct: 554 ELAINPELVGKGSRMIITTRNMHILRVYGEQLSLSHGTCVS--YEVPLLNNNDARELFYR 611

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF    PA+  L L+  V+KY  G+PLA++V+GS+L   +  +W  A+ +L+  P   +
Sbjct: 612 KAFKSKDPASECLNLTPEVLKYVEGLPLAIRVVGSFLCTRNANQWRDALYRLRNNPDNKV 671

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
              L+V ++GL  E++ IFL  ACFFKG  +  V   LDAC     +GI  L+  SL+TI
Sbjct: 672 MDALQVCFEGLHSEDREIFLHIACFFKGEKEEYVKRILDACGLHPHLGIQGLIESSLITI 731

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL----------------- 476
            N +I MH++LQE+G +IVRQ+  ++PG  SRLW  ED   V+                 
Sbjct: 732 RNQEIHMHEMLQELGKKIVRQQFPEEPGSWSRLWLYEDFNPVMMTETGTDKVKAIILDKK 791

Query: 477 ----------NENTSLPTGINLDSLKELYLGGCSNL------------KRFPEISCNIED 514
                      E  S+  G+ +  L      G  N               F  +  N E 
Sbjct: 792 EDISEYPLLKAEGLSIMRGLKILILYHTNFSGSLNFLSNSLQYLLWYGYPFASLPLNFEP 851

Query: 515 LDLKE-----TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
           L L E     + I+ L     NL  L  +DL+N   L   +      + + RL+ +GC+ 
Sbjct: 852 LRLVELNMPCSLIKRLWDGHKNLPCLKRVDLSNSRCLVE-TPNFTGSQIIERLDFTGCIN 910

Query: 570 LEKLPEEIGNLESLEYL------NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           L  +   IG L+ L +L      NL     +  P+S   L  L  L L  C +L+ + + 
Sbjct: 911 LSYVHPSIGLLKELAFLSLEGCRNLVSLVLDGHPAS--NLYSLKVLHLSGCSKLEIVSDF 968

Query: 624 PCGSSIHA---RHCTSLKTLSNSSTLLTR 649
              S++       C SL T++ S   LT+
Sbjct: 969 RGVSNLEYLDIDQCVSLSTINQSIGDLTQ 997



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 86/188 (45%), Gaps = 46/188 (24%)

Query: 487  NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
            NL SLK L+L GCS L+   +     N+E LD+ +  ++  +  SIG+L++L  L    C
Sbjct: 947  NLYSLKVLHLSGCSKLEIVSDFRGVSNLEYLDIDQCVSLSTINQSIGDLTQLKFLSFREC 1006

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----------------------------- 574
            + L S+   + ++ SL  L+L GC KLE LP                             
Sbjct: 1007 TSLASIPESINSMTSLETLDLCGCFKLESLPLLGNTSVSEINVDLSNDELISSYYMNSLI 1066

Query: 575  -------------EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                           IG L  LE LNL   +   +PSS+  LS L+ L L +C RLQSLP
Sbjct: 1067 FLDLSFCNLSRVPNAIGELRHLERLNLEGNNLISLPSSVGGLSSLAYLNLAHCSRLQSLP 1126

Query: 622  ELP-CGSS 628
            EL  C +S
Sbjct: 1127 ELQLCATS 1134


>gi|357437847|ref|XP_003589199.1| Disease resistance protein [Medicago truncatula]
 gi|355478247|gb|AES59450.1| Disease resistance protein [Medicago truncatula]
          Length = 1613

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 250/709 (35%), Positives = 374/709 (52%), Gaps = 115/709 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           MASSSSS        +DVFLSFRG D R+ F  HL  AL  + I TFIDD  L +G++I+
Sbjct: 1   MASSSSSFT------YDVFLSFRGTDTRYTFTGHLYKALHNKGIMTFIDDDHLQKGDQIT 54

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GY 118
           PSL  AIE S+I+IV+ S+ YASS +CL EL KILE+    G +V PVFY V+PS+    
Sbjct: 55  PSLLKAIENSRIAIVVLSKNYASSSFCLQELCKILEN----GGLVWPVFYEVEPSNVRKL 110

Query: 119 CPSLG-WMGIFDIPTSESV------------------------------LIEGNVNDISK 147
             S G  M + ++  S+ V                               I   V  +S+
Sbjct: 111 SGSFGEAMAVHEVRYSDDVDRLEKWKKGLYQVANLAGFHYKNGDGYEHEFIGKIVEQVSR 170

Query: 148 KLSDL-FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
           ++  L  P    +  VG+E   K + S L  G    + V   GI GIGKTT+A  +Y+ I
Sbjct: 171 EIKPLTIPV--VEYRVGLEPQRKNVLSLLNVGCD--DRVAKVGIHGIGKTTLALEVYNLI 226

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHLNFERRRLSRMK-------V 246
              FE S F++NI++ SEK G             G   I L   ++ +S ++       V
Sbjct: 227 VHQFESSCFLENIQENSEKHGLIYLQKIILLEIIGEKEIELTSVKQGISVIQQRLRKKKV 286

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+ + KQ+D + G  D +  GSRVIITTRD  LL +H    V   +EV EL+  D
Sbjct: 287 LLLLDDVDEQKQLDAIAGGNDWYGLGSRVIITTRDKGLLLSHG---VESTYEVHELNKKD 343

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +  L  + AF  N     + ++ N  + +A+G+PLAL+V+GS+L   + E+ +S +++ +
Sbjct: 344 AFELLRQKAFKTNKVCPNYADVLNRALTHASGLPLALEVIGSHLFHKTVEQCKSTLDRYE 403

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF-SAKIGISRL 425
           R+P   +Q +LKVS+D L++EE+++FLD AC FKG D  +V   L A    + +  +  L
Sbjct: 404 RIPDKKMQTLLKVSFDALEEEEKSVFLDIACCFKGYDLTIVNKMLHAHHGDNMEDHMQVL 463

Query: 426 VGKSLVTISNNK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT 484
           V KSL+ I+ ++ +T+HD++++MG EIVRQES K+PGKRSRLW PEDI QVL ENT    
Sbjct: 464 VEKSLIKITESRSVTLHDVIEDMGKEIVRQESPKEPGKRSRLWCPEDIVQVLEENT---- 519

Query: 485 GINLDSLKELYLGGCSNLK----RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
                 ++ +YL     +K     F ++  N+  L ++  A  E P  + N  R+++   
Sbjct: 520 --GTSKIEIIYLDSSIEVKWDEEAFKKME-NLRTLIIRHGAFSESPKYLPNSLRILEWRK 576

Query: 541 TNCSGLKS----VSSRLCNL-----------------KSLRRLNLSGCLKLEKLPEEIG- 578
               G+ S        +C +                 ++++ LN+  C  L ++P+  G 
Sbjct: 577 YPSGGVPSDFYPKKLAICKIAFDFTSFVWGDFLKKKFQNMKVLNIDNCGFLARMPDISGL 636

Query: 579 -NLESLEYL---NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            NLE L +    NL   D      S+  L+KL  LR+ +CK+L+SLP L
Sbjct: 637 LNLEELSFQYCENLITMD-----DSVGLLAKLKILRVGSCKKLKSLPPL 680



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 90/176 (51%), Gaps = 19/176 (10%)

Query: 477  NENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG------ 530
            N   S+P  + LDSLKEL+L  C +L+ F  +   +    LK+     + S I       
Sbjct: 860  NSIISIPP-LKLDSLKELHLSYCDSLENFQPVMNGL----LKKLQFLSIKSCINIKSIPP 914

Query: 531  -NLSRLVDLDLTNCSGLKSVSSRLCN-LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
              L+ L +LDL+NC  L+S    +   L++L+ L++  C KL  +P     L+SLE L++
Sbjct: 915  LQLTSLEELDLSNCQSLESFPPVVDQLLENLKFLSIRYCHKLRIIPP--LKLDSLELLDI 972

Query: 589  AEKD-FEKIPSSMK-QLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
            +  D  +  P  +   L KL  +R+++C  L+S+P L   S   +   +C SL++ 
Sbjct: 973  SYCDSLDSFPHVVDGMLEKLKIMRVKSCSNLKSIPPLKLASLEELDLSYCDSLESF 1028



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 35/168 (20%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG-------NLS 533
            S+P  + LDSL++L L  C +LK FP I     D  LK+  I  + +          NL+
Sbjct: 1193 SIPP-LKLDSLEQLDLSYCDSLKSFPPIV----DGQLKKLKILRVTNCSNIRSIPPLNLA 1247

Query: 534  RLVDLDLTNC--------------SGLKSVSSRLC---------NLKSLRRLNLSGCLKL 570
             L +L+L+ C              + LK +S R C            SL  L+LS C  L
Sbjct: 1248 SLEELNLSYCHNLECFPLVVDRFPNNLKVLSVRYCRKLKSIPPLKFASLEVLDLSYCDNL 1307

Query: 571  EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
            E  P+ +G +E++  ++L     +++P S + L++L  L L NC  +Q
Sbjct: 1308 ESFPKILGEMENIRQVHLYTTPIKELPFSFQNLTRLRTLYLCNCGIVQ 1355



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 13/179 (7%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVD 537
            S+P  +   SL+ L L  C NL+ FP+I     NI  + L  T I+ELP S  NL+RL  
Sbjct: 1287 SIPP-LKFASLEVLDLSYCDNLESFPKILGEMENIRQVHLYTTPIKELPFSFQNLTRLRT 1345

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLS--GCL--KLEKLPEEIGNLES--LEYLNLAEK 591
            L L NC G+  + S +  ++ L  L +   G L  K ++  +E+ +++S  +E+L +   
Sbjct: 1346 LYLCNC-GIVQLPSSIVMMQELDELIIEDGGWLFQKEDQGDKEVISMQSSQVEFLRVWNC 1404

Query: 592  DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTR 649
            +      ++  +   + L L NC+ LQ +  +P    +  A +C SL TLS +S  + +
Sbjct: 1405 NLSDESLAIGLMWFANKLFLDNCENLQEIKGIPPNLKTFSAINCISL-TLSCTSKFMNQ 1462



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 497  GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
            G    L+ F  ISCN          I+ +P     L+ L +L+LT C GL+S    +  L
Sbjct: 1128 GMLEKLRIFRVISCN---------RIQSIPPL--KLTSLEELNLTYCDGLESFPHVVDGL 1176

Query: 557  -KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK--IPSSMKQLSKLSDLRLQN 613
               L+ LN+  C KL+ +P     L+SLE L+L+  D  K   P    QL KL  LR+ N
Sbjct: 1177 LGKLKVLNVRYCHKLKSIPP--LKLDSLEQLDLSYCDSLKSFPPIVDGQLKKLKILRVTN 1234

Query: 614  CKRLQSLPELPCGS--SIHARHCTSLKTL 640
            C  ++S+P L   S   ++  +C +L+  
Sbjct: 1235 CSNIRSIPPLNLASLEELNLSYCHNLECF 1263



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 20/199 (10%)

Query: 477  NENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAI------EELPSSIG 530
            N+  S P  + L SL+ L L  C NL+ FP +     D  L+  +I        +P    
Sbjct: 1048 NKLKSFPP-LKLASLEVLDLSYCDNLESFPLLVDGFMD-KLQFLSIIYCSKLRSIPPL-- 1103

Query: 531  NLSRLVDLDLTNCSGLKSVSSRLCN-LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
             L+ L   DL+ C  L S    +   L+ LR   +  C +++ +P     L SLE LNL 
Sbjct: 1104 KLALLEHFDLSYCDSLVSFPPVVDGMLEKLRIFRVISCNRIQSIPP--LKLTSLEELNLT 1161

Query: 590  EKD-FEKIPSSMKQ-LSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTLSNSST 645
              D  E  P  +   L KL  L ++ C +L+S+P L   S   +   +C SLK+      
Sbjct: 1162 YCDGLESFPHVVDGLLGKLKVLNVRYCHKLKSIPPLKLDSLEQLDLSYCDSLKSF---PP 1218

Query: 646  LLTRSSKHWDIFNFSNCSN 664
            ++    K   I   +NCSN
Sbjct: 1219 IVDGQLKKLKILRVTNCSN 1237



 Score = 42.4 bits (98), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 29/156 (18%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS-CNIEDLDLKET-AIEELPSSI-GNLSRLVDLDLTNCS 544
           L+ LK L + GCSN+K  P     ++E+LDL    ++   P  + G L +L  L +  C 
Sbjct: 754 LEKLKILRVIGCSNIKSIPPFKLTSLEELDLSYCNSLTSFPVIVDGFLDKLKLLSVRYCC 813

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK++      L +L +L+LS C  LE  P  +  L                      L 
Sbjct: 814 KLKNIPP--LKLGALEQLDLSYCNSLESFPPVVDGL----------------------LG 849

Query: 605 KLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLK 638
           KL  L++  C  + S+P L   S   +H  +C SL+
Sbjct: 850 KLKILKVFCCNSIISIPPLKLDSLKELHLSYCDSLE 885



 Score = 40.0 bits (92), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 29/158 (18%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
             ++K L +  C  L R P+IS   N+E+L  +    +  +  S+G L++L  L + +C 
Sbjct: 613 FQNMKVLNIDNCGFLARMPDISGLLNLEELSFQYCENLITMDDSVGLLAKLKILRVGSCK 672

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS+      L SL  L+LS    LE  P  +                         L+
Sbjct: 673 KLKSLPPL--KLVSLEELDLSYIDSLESFPHVVDGF----------------------LN 708

Query: 605 KLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
           KL  L ++NC  ++S+P L   S   ++  +C SL+  
Sbjct: 709 KLQTLSVKNCNTIRSIPPLKMASLEELNLLYCDSLECF 746


>gi|317415953|emb|CAR94518.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2041

 Score =  308 bits (788), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 261/796 (32%), Positives = 387/796 (48%), Gaps = 166/796 (20%)

Query: 3   SSSSSINMIPHP----KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNE 57
           ++ +S  + P P    +++VFLSFRG D R  F  HL  AL R  I TF DD +L  G  
Sbjct: 6   TTQTSSALPPPPTRPLEYEVFLSFRGFDTRKGFTDHLYKALIRNGIHTFRDDEQLKSGKP 65

Query: 58  ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-- 115
           IS  L  AIE SKIS++I S  YA+S WCL+EL K++E  N   + ++PVFY V PS+  
Sbjct: 66  ISKELFKAIEESKISVIILSTNYATSTWCLDELAKMVELANNESRSILPVFYNVTPSEVR 125

Query: 116 -------------------------AGYCPSLGWMGI-----FDIPT--SESVLIEGNVN 143
                                    A +  SL  +       FD+     E+ +IE  V 
Sbjct: 126 EQTGDHFQEAFAQHDKDFEGEPGKVARWKNSLTAIAELEAEGFDLTNFRYETDMIEKIVE 185

Query: 144 DISKKLSDLFPSDNKDQLVGVESIIKEIESQ--LLSGSTEFNTVGIWGIGGIGKTTIASA 201
            I   L   F +D+    VG++ +  EI+S+  L  GS E   +GI G+ GIGK+T+A A
Sbjct: 186 RIFGILIKTFSNDDLKDFVGMDRV-NEIKSKMSLCMGSEEVRVIGICGMPGIGKSTVAKA 244

Query: 202 IYSNISSHFEGSYFMQNIRDESEKVGGLANI------HLNFER-----------RRLSRM 244
           +   I S F+   F+  + + S+K  GL +I      HL  ++           +RL   
Sbjct: 245 LSQRIRSQFDAISFISKVGEISKK-EGLFHIKEQLCDHLLDKKVTTKDVDDVICKRLRDK 303

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDG------FVPGSRVIITTRDVQLLKNHRGSRVGHVFE 298
           +VLI+  ++ +L+QI+ + G  DG      F  GSR+I+TT D +LL ++       ++ 
Sbjct: 304 RVLIILDNVDELEQIEAVAGS-DGAGLSNRFGKGSRIIVTTTDERLLIDYNPE----IYT 358

Query: 299 VKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEW 358
           +++L+ + +L LF R A   +HP   F +LSN  + Y +G PLAL+V G  L    E+ W
Sbjct: 359 IEKLTPDQALLLFCRKALKTDHPTDAFKKLSNEFVDYIDGHPLALEVFGHSLWKREEDYW 418

Query: 359 ESAVNKLKRMPHMDIQK---VLKVSYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDAC 414
            + +  LK   +   +K   VLK S+DGL+++EQ ++FLDTACFFKG D   +    ++C
Sbjct: 419 STKLKSLKDKGYSGEKKIIGVLKASFDGLENQEQQDMFLDTACFFKGEDVCRLEKIFESC 478

Query: 415 RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
            +   I I+ L  KSLV+I   ++ MHDLLQ+MG  +V  ES K+ G+RSRLWH  D   
Sbjct: 479 GYYPGINITILCEKSLVSIVGGRLWMHDLLQKMGRGLVLGESKKE-GERSRLWHHTDALP 537

Query: 475 VLNEN--TSLPTGI------------------NLDSLKELYLGGCSNLKRFPEISCNIED 514
           VL +N  T    GI                  N+D+L+ L +           +S  +  
Sbjct: 538 VLKKNKGTDAVQGIFLSLPQPDKVHLKKDPFSNMDNLRLLKIYNVEFSGSLEYLSDELSL 597

Query: 515 LDLKETAIEELPSS-------------------------------IGNLS------RLVD 537
           L+  +  ++ LPSS                               + NLS      +  D
Sbjct: 598 LEWHKCPLKSLPSSFEPDKLVELNLSESEIEELWEEIERPLEKLAVLNLSDCQKLIKTPD 657

Query: 538 LD---------LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
            D         L  C+ L +V   + NL+SL    LSGC KL+KLPE   +++ L  L+L
Sbjct: 658 FDKVPNLEQLILKGCTSLSAVPDDI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHL 716

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLT 648
                E++P+S+K L+ L+ L L++CK L SLP++          CTSL +L        
Sbjct: 717 DGTAIEELPTSIKHLTGLTLLNLRDCKNLLSLPDVI---------CTSLTSLQ------- 760

Query: 649 RSSKHWDIFNFSNCSN 664
                  I N S CSN
Sbjct: 761 -------ILNVSGCSN 769



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 27/189 (14%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           +++P  INL SL    L GCS LK+ PEI  +++ L    L  TAIEELP+SI +L+ L 
Sbjct: 676 SAVPDDINLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHLDGTAIEELPTSIKHLTGLT 735

Query: 537 DLDLTNCSGLKSVSSRLC-NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            L+L +C  L S+   +C +L SL+ LN+SGC  L +LPE +G+LE L+ L  +    ++
Sbjct: 736 LLNLRDCKNLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELYASRTAIQE 795

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWD 655
           +P+S+K L+ L+ L L+ CK L +LP++          CT+L +L               
Sbjct: 796 LPTSIKHLTDLTLLNLRECKNLLTLPDVI---------CTNLTSLQ-------------- 832

Query: 656 IFNFSNCSN 664
           I N S CSN
Sbjct: 833 ILNLSGCSN 841



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 93/151 (61%), Gaps = 8/151 (5%)

Query: 481 SLPTGI--NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
           SLP  I  +L SL+ L + GCSNL   PE    + C +++L    TAI+ELP+SI +L+ 
Sbjct: 747 SLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC-LQELYASRTAIQELPTSIKHLTD 805

Query: 535 LVDLDLTNCSGLKSVSSRLC-NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
           L  L+L  C  L ++   +C NL SL+ LNLSGC  L +LPE +G+L+ L+ L  +    
Sbjct: 806 LTLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLKCLKDLYASRTAI 865

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            ++P S+ QLS+L +L L  C  LQSLP LP
Sbjct: 866 SQVPESISQLSQLEELVLDGCSMLQSLPGLP 896


>gi|227438219|gb|ACP30599.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 963

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 248/720 (34%), Positives = 364/720 (50%), Gaps = 101/720 (14%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P  K+DVFLSFRG DVR  F+SHL  AL    I TF DD +L RGN ISP+L  AIE S+
Sbjct: 56  PLWKYDVFLSFRGTDVRKGFLSHLYKALTDNGIHTFRDDAELQRGNFISPALLGAIEQSR 115

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS---------------- 114
            ++V+ SE YA+SRWCL ELV I +   K    ++PVF+ VDPS                
Sbjct: 116 FAVVVLSENYATSRWCLQELVHITKCVEKKQMELIPVFFGVDPSHVKRQSGNFAKAFAEH 175

Query: 115 ------DA-----GYCPSLGWMGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                 DA         ++G++  +D      ES LIE  V D+S ++     + +  + 
Sbjct: 176 DKRPNKDAVESWRKAMATVGFISGWDSRNWNEESKLIEELVQDLSDRIFSAVSTSDTGEW 235

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           +G+ + ++ I   +     +   VGIWG+GGIGKTTIA  IY    S F G+  ++N++ 
Sbjct: 236 IGMSTHMRSIYPLMSKDPNDVRMVGIWGMGGIGKTTIAKYIYKGFLSEFYGACLLENVKK 295

Query: 222 ESEKVG------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           E ++ G                     N   +  ++RL   KVL+V  D+ D++Q++ L 
Sbjct: 296 EFKRHGPSHLREKILSEIFRKKDMNTWNKDSDVMKQRLQGKKVLLVLDDVDDIQQLEELA 355

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           G  D F PGSR++ITTRD ++L  H   R+   +EVK L    +L LFS++AF Q  P+ 
Sbjct: 356 GSSDWFGPGSRIVITTRDRRVLDQHDVERI---YEVKPLRTTQALQLFSKHAFKQPRPSE 412

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
            + ELS  V++   G+PLA+QV+G  L     + WE  ++ L+        K LKVSY+ 
Sbjct: 413 DYRELSLDVVEQLGGLPLAIQVVGGSLYRRELKFWEDKLDLLRNNGDNSAFKALKVSYEA 472

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-------KIGISRLVGKSLVTISNN 436
           LD+ E+ IFL  A  F G     V   LD C  S+       +  I  L+ K ++++S N
Sbjct: 473 LDEIEKKIFLYVALCFNGVYMDRVRKVLDLCFVSSRRRVLPTRPSIVALMEKCMISLSKN 532

Query: 437 KIT-MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELY 495
           K+  +HDLLQ+M  EI+ +   + P KR  LW  EDI  V + N      I+++S+  L 
Sbjct: 533 KLLWVHDLLQDMAEEIICEGKDERPWKRLMLWDFEDINHVFSTNMG-DEAIDVESIF-LD 590

Query: 496 LGGCSNLKRFPEISCNIEDLDLKE----TAIEE--------------------------- 524
           +   + L   P I   + +L L E    +++EE                           
Sbjct: 591 MSEGNELSITPGIFKKMPNLKLLEFYTNSSVEESRTRMLDGLEYLPTLRYLHWDAYHLKS 650

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLES 582
           LP      S LV+L+L++ S     S    +L +LR LNL  C  L + P+  +  NLES
Sbjct: 651 LPPQFCT-SFLVELNLSHSSIQTVWSGSQQDLGNLRSLNLISCKHLNEFPDLSKATNLES 709

Query: 583 LEYLNLAEKDFEKIP-SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLK 638
           L+  N    +  +IP SS++QL+KL   +L NCK L+SLP    L    S+H   C+SL+
Sbjct: 710 LKLSNC--DNLVEIPDSSLRQLNKLVHFKLSNCKNLKSLPNNINLKSLRSLHLNGCSSLE 767



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 86/141 (60%), Gaps = 3/141 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP  INL SL+ L+L GCS+L+ FP IS  +E L L ET+I+++P SI  L+RL D+ L
Sbjct: 745 SLPNNINLKSLRSLHLNGCSSLEEFPFISETVEKLLLNETSIQQVPPSIERLTRLRDIHL 804

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           + C  L ++   + NLK L  L L+ C  +   P E+G   S+ +LNL +   +++P ++
Sbjct: 805 SGCKRLMNLPECIKNLKFLNDLGLANCPNVISFP-ELG--RSIRWLNLNKTGIQEVPLTI 861

Query: 601 KQLSKLSDLRLQNCKRLQSLP 621
              S+L  L +  C +L +LP
Sbjct: 862 GDKSELRYLNMSGCDKLMTLP 882



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 88/140 (62%), Gaps = 8/140 (5%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELP-SSIGNLSRLVDLDLTN 542
           +L +L+ L L  C +L  FP++S   N+E L L     + E+P SS+  L++LV   L+N
Sbjct: 680 DLGNLRSLNLISCKHLNEFPDLSKATNLESLKLSNCDNLVEIPDSSLRQLNKLVHFKLSN 739

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C  LKS+ + + NLKSLR L+L+GC  LE+ P      E++E L L E   +++P S+++
Sbjct: 740 CKNLKSLPNNI-NLKSLRSLHLNGCSSLEEFP---FISETVEKLLLNETSIQQVPPSIER 795

Query: 603 LSKLSDLRLQNCKRLQSLPE 622
           L++L D+ L  CKRL +LPE
Sbjct: 796 LTRLRDIHLSGCKRLMNLPE 815



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           +LP  I NL  L +L L  C N+  FPE+  +I  L+L +T I+E+P +IG+ S L  L+
Sbjct: 812 NLPECIKNLKFLNDLGLANCPNVISFPELGRSIRWLNLNKTGIQEVPLTIGDKSELRYLN 871

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
           ++ C  L ++   +  L  L+ LNL GC+ + + P   G
Sbjct: 872 MSGCDKLMTLPPTVKKLGQLKYLNLRGCVNVTESPNLAG 910


>gi|224126833|ref|XP_002329484.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870164|gb|EEF07295.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 507

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 185/486 (38%), Positives = 273/486 (56%), Gaps = 63/486 (12%)

Query: 50  DKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVF 108
           D+L RG EIS  L  AI+ SKISIV+FS+GYASSRWCLNELV+ILE  K K GQIV+P+F
Sbjct: 1   DELPRGEEISDHLLRAIQESKISIVVFSKGYASSRWCLNELVEILECKKRKTGQIVLPIF 60

Query: 109 YLVDPSD-----AGYCPSL--------------------------GWMGIFDIPTS-ESV 136
           Y +DPSD       +  +                           GW  + D+    E+ 
Sbjct: 61  YDIDPSDVRKQNGSFAEAFVKHEERFEEKLVKEWRKALEEAGNLSGW-NLNDMANGHEAK 119

Query: 137 LIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKT 196
            I+  + D+  KL   +  D  + LVG++ + + I   L + + +   VGI G+ GIGKT
Sbjct: 120 FIKEIIKDVLNKLDPKY-LDVPELLVGMDRLSRNIFDFLSTATHDVRIVGIHGMPGIGKT 178

Query: 197 TIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFE------------------- 237
           TIA  +++ +   FEGS F  NI + S++  GLA +                        
Sbjct: 179 TIAKVVFNQLRYRFEGSCFFSNINETSKQFNGLALLQEQLLHDILKQDVANINCVDRGKV 238

Query: 238 --RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             + RL R +VL+V  D+T   Q++ L+G    F PGSRVIITTRD   L      +   
Sbjct: 239 LIKERLRRKRVLVVADDVTRQDQLNALMGERGWFGPGSRVIITTRDSSFL-----HKADQ 293

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            ++++EL  ++S  LFS +A     PA  ++ELS  V+ Y  G+PLAL+V+G+ L G + 
Sbjct: 294 TYQIEELKPDESFQLFSWHALRDTKPAEDYIELSKDVVDYCGGIPLALEVMGACLSGKNR 353

Query: 356 EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA- 413
           + W+S ++KL+R+P+ DIQ  L++S+D LD EE QN FLD ACFF    +  V   L A 
Sbjct: 354 DGWKSVIDKLRRIPNRDIQGKLRISFDALDGEELQNAFLDIACFFIDRKKEYVAKVLGAR 413

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           C ++ ++ +  L  +SL+ +    +TMHDLL++MG E+VR++S K PG+R+R+W+ ED +
Sbjct: 414 CGYNPEVDLQTLHERSLIKVLGETVTMHDLLRDMGREVVREKSPKQPGERTRIWNQEDAW 473

Query: 474 QVLNEN 479
            VL + 
Sbjct: 474 NVLEQQ 479


>gi|37549278|gb|AAQ93077.1| putative TIR-NBS type R protein 11 [Malus x domestica]
          Length = 634

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 202/512 (39%), Positives = 292/512 (57%), Gaps = 60/512 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           ++VF+SFRG+D R NF  HL+ AL +  I  FIDD+L RG +I+  L  AI+GS+ISI++
Sbjct: 108 YEVFISFRGEDTRKNFTGHLHEALTKAGINAFIDDELRRGEDITTELVQAIQGSRISIIV 167

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSL-------- 122
           FS  Y+ S WCL ELVK++E +   GQ+V+P+FY VDPS        +  S         
Sbjct: 168 FSRRYSDSSWCLEELVKVMECRRTLGQLVLPIFYDVDPSHVRKQTGRFAQSFLKHTDEKK 227

Query: 123 ---------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                          GW     +   E+  I    ND++ KL++ +  D     VG+++ 
Sbjct: 228 VERWRAALTEASNLSGWDLRNTLDGHEAKFIRMITNDVTTKLNNKY-FDVAPYQVGIDTR 286

Query: 168 IKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE---- 222
           + +I + L +  S +   +GI G+GGIGKTTIA AIY+     FEG  F++ +R++    
Sbjct: 287 VLDISNYLGIGDSDDVRVIGISGMGGIGKTTIAQAIYNIFYERFEGKSFLEKVREKKLEK 346

Query: 223 ----------------SEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
                           S  V G A +     R R  R+KVL++  D+ D+KQ+  L+G  
Sbjct: 347 LQKQLLFDILQTKTKVSSVVAGTALV-----RERFRRLKVLVIVDDVDDVKQLRELVGNC 401

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
             F PGSR+IITTR+ ++LK      V  ++  K +   ++L L S +AF  +   + +L
Sbjct: 402 HFFGPGSRIIITTRNERVLKEFA---VDKIYRAKVMDREEALELLSWHAFRSSSCPSQYL 458

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
            L   V+ Y  G+PLAL+VLGS L   S +EW S +++LK +P  +IQ  LK+SYDGL+D
Sbjct: 459 ALEREVVNYCGGLPLALEVLGSTLFKRSVDEWRSILDELKMIPRGEIQAQLKISYDGLND 518

Query: 387 E-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLL 444
             ++ IFLD ACFF G D+  V+  LD C F +  GI  L+ + LVTI+  NKI MHDLL
Sbjct: 519 NYKRRIFLDIACFFIGMDKNDVVQILDGCGFYSTTGIEVLLNRCLVTINRENKIMMHDLL 578

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           ++MG +IV  E+   PG+RSRLWHPED+  VL
Sbjct: 579 RDMGRDIVHAENPDFPGERSRLWHPEDVNDVL 610


>gi|7635470|emb|CAB88530.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1220

 Score =  307 bits (787), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 251/764 (32%), Positives = 373/764 (48%), Gaps = 130/764 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 97  KHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 156

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---------AGYCPSLG-- 123
           + S  YASS WCL+EL +I++ +   GQIV+ +FY VDP+D           +  +    
Sbjct: 157 LLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCRGK 216

Query: 124 -------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 217 PKEQVERWRKALEDVATIAGYHSHSWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMR 276

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  +++ +S  F+ S  M NI+     
Sbjct: 277 AHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPR 336

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 337 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 396

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++V+  S +++  +F  NAFGQ  P  
Sbjct: 397 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVEYPSNDEAFQIFCMNAFGQKQPHE 453

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V   A  +PL L+VLGS L+G S+ EWE  + +LK      I  +++ SYD 
Sbjct: 454 GFDEIAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFSYDV 513

Query: 384 LDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           L DE++ +FL  AC F G      + L+  FLD      K G+  L  KSL++    +I 
Sbjct: 514 LCDEDKYLFLYIACLFNGESTTKVKELLGKFLD-----VKQGLHLLAQKSLISFDGERIH 568

Query: 440 MHDLLQEMGGEIVRQESIKDP-GKRSRLWHPEDIYQVLNENTSLP---TGINLD---SLK 492
           MH LL++ G E  R++ +     KR  L     I +VL+++T+      GI+L+   + +
Sbjct: 569 MHTLLEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEE 628

Query: 493 ELYLGGCSNLKRF-------------PE-ISCNIEDLDLKETAIEE----------LPSS 528
           EL +     L+R              PE +   ++DL      I            LPS+
Sbjct: 629 ELNISE-KVLERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPST 687

Query: 529 IGNLSRLVDLDL--TNCSGLKSVSSRLCNLK--------------------SLRRLNLSG 566
             N   LV+LD+  +N   L   + +L NLK                    +L  L L  
Sbjct: 688 F-NPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRN 746

Query: 567 CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           C  L +LP  I  L SL+ L+L      EK+P +++  +KL +L+LQNC  L  LP L  
Sbjct: 747 CSSLVELPSSIEKLTSLQILDLENCSSLEKLP-AIENATKLRELKLQNCSSLIELP-LSI 804

Query: 626 GSSIHARH-----CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           G++ + +      C+SL  L +S   +T      ++F+ SNCS+
Sbjct: 805 GTATNLKQLNISGCSSLVKLPSSIGDIT----DLEVFDLSNCSS 844



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 82/161 (50%), Gaps = 29/161 (18%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP  INL SL  L L  CS LK FPEIS +I +L LK TAI+E+P SI + S L D  +
Sbjct: 871  ALPININLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQI 930

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +                             E L E     + +  L+L+ KD +++P  +
Sbjct: 931  S---------------------------YFESLMEFPHAFDIITKLHLS-KDIQEVPPWV 962

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            K++S+L DL L NC  L SLP+L      I+A +C SL+ L
Sbjct: 963  KRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERL 1003



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 12/191 (6%)

Query: 463 RSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE 519
           R+  W        L E  +L T  NL+ LK   L  CS+L   P   E   +++ LDL+ 
Sbjct: 714 RNLKWMDLSYSSYLKELPNLSTATNLEELK---LRNCSSLVELPSSIEKLTSLQILDLEN 770

Query: 520 -TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            +++E+LP+ I N ++L +L L NCS L  +   +    +L++LN+SGC  L KLP  IG
Sbjct: 771 CSSLEKLPA-IENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIG 829

Query: 579 NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHC 634
           ++  LE  +L+       +PSS+  L  L  L ++ C +L++LP    L    +++   C
Sbjct: 830 DITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKSLDTLNLTDC 889

Query: 635 TSLKTLSNSST 645
           + LK+    ST
Sbjct: 890 SQLKSFPEIST 900


>gi|356545721|ref|XP_003541284.1| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
           [Glycine max]
          Length = 653

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 233/633 (36%), Positives = 332/633 (52%), Gaps = 108/633 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFRG+D R NF  HL  AL ++KI+T+ID++L +G++I+ +L+ AIE S ISIV
Sbjct: 23  KYDVFLSFRGEDTRRNFTCHLYEALMQKKIKTYIDEQLEKGDQIALALTKAIEDSCISIV 82

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGWM-GIF 128
           IFS+ YASS+WCL EL KILE K + GQIV+PVFY +DPS        Y  +   + G  
Sbjct: 83  IFSDNYASSKWCLGELFKILECKKEKGQIVIPVFYNIDPSHVRKQIGSYKQAFAKLEGEP 142

Query: 129 DIPTSESVLIEGN----------------VNDISKKLSDLFPSDNKDQ---LVGVESIIK 169
           +    +  L E                  + DI + +S+  P   ++Q   LVG+E   K
Sbjct: 143 ECNKWKDALTEAANLVGLDSKNYRNDVELLKDIVRAVSEKLPRRYQNQSKGLVGIEEHYK 202

Query: 170 EIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGL 229
            IES L +GS+E  T+GIWG+GGIGK+T+A+A+Y+ +S  FEG  F  N+ D+SE    +
Sbjct: 203 RIESFLNNGSSEVRTLGIWGMGGIGKSTLATALYNELSPEFEGHCFFINVFDKSE----M 258

Query: 230 ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
           +N         L   +V IV  D+   +Q++ LIG  D    GSRVI+T+R+ Q+L    
Sbjct: 259 SN---------LQGKRVFIVLDDVATSEQLEKLIGEYDFLGLGSRVIVTSRNKQML---- 305

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
            S V  ++ V+ELS + SL LF    FG+  P  G+ +LS  VI Y              
Sbjct: 306 -SLVDEIYSVEELSSHHSLQLFCLTVFGEEQPKDGYEDLSRRVIFYCK------------ 352

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
                                              D  ++ IFLD ACFFKG  +  V  
Sbjct: 353 -----------------------------------DCSQKEIFLDLACFFKGGKRDWVAG 377

Query: 410 FLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
            L+A  F     I  L+ KSL+ IS  N+I MHDL QEMG EI+RQ+SIKDPG+RSRL  
Sbjct: 378 LLEAFGFFPASEIEVLLDKSLIRISKYNEIEMHDLTQEMGREIIRQQSIKDPGRRSRLCK 437

Query: 469 PEDIYQVL--NENTSLPTGINLDSLK---ELYLGGCSNLK----RFPEISCNIEDLDLKE 519
            E++  VL  N+ T +  GI L+  K   +L+L   S  K    RF  I       +   
Sbjct: 438 HEEVVDVLKHNKGTDVVEGIILNLHKLTGDLFLSSDSLAKMTNLRFLRIHKGWRSNNQFN 497

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
             +     S+ N  R +  D   C  L+S+ S  C  + L  +++    KL+KL + + N
Sbjct: 498 VFLSNGLESLSNKLRYLHWD--ECC-LESLPSNFCA-EQLVEISMPRS-KLKKLWDGVQN 552

Query: 580 LESLEYLNLAE-KDFEKIPS--SMKQLSKLSDL 609
           L SL+ ++L E +D  +IP     K+L ++S +
Sbjct: 553 LVSLKTIDLQESRDLIEIPDLFMAKKLERVSGM 585


>gi|295083329|gb|ADF78118.1| rj2 protein [Glycine max]
 gi|308171408|gb|ADO15998.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 262/740 (35%), Positives = 364/740 (49%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE      Q+VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNQLVVPVFYNVDPSDVRHQ 116

Query: 117 --GYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTKVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNN------KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +      ++TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPRVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGLWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSFCYSLESFPKI 722



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 38/194 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI +L L  ++I EL  S  NL+ L  LDL+ 
Sbjct: 700 IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSITELSFSFQNLAGLQALDLSF 759

Query: 543 CS--GLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLES------------- 582
            S   +  V S +  +  L  + + G      LK E+  E+ G++ S             
Sbjct: 760 LSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L + +CK L+ +  +P    
Sbjct: 820 SDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLS 641
              A +C SL + S
Sbjct: 880 HFFAINCKSLTSSS 893


>gi|30692151|ref|NP_190034.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644385|gb|AEE77906.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1194

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 251/764 (32%), Positives = 373/764 (48%), Gaps = 130/764 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 97  KHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 156

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---------AGYCPSLG-- 123
           + S  YASS WCL+EL +I++ +   GQIV+ +FY VDP+D           +  +    
Sbjct: 157 LLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCRGK 216

Query: 124 -------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 217 PKEQVERWRKALEDVATIAGYHSHSWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMR 276

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  +++ +S  F+ S  M NI+     
Sbjct: 277 AHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPR 336

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 337 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 396

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++V+  S +++  +F  NAFGQ  P  
Sbjct: 397 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVEYPSNDEAFQIFCMNAFGQKQPHE 453

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V   A  +PL L+VLGS L+G S+ EWE  + +LK      I  +++ SYD 
Sbjct: 454 GFDEIAWEVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLDGKIGSIIQFSYDV 513

Query: 384 LDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           L DE++ +FL  AC F G      + L+  FLD      K G+  L  KSL++    +I 
Sbjct: 514 LCDEDKYLFLYIACLFNGESTTKVKELLGKFLD-----VKQGLHLLAQKSLISFDGERIH 568

Query: 440 MHDLLQEMGGEIVRQESIKDP-GKRSRLWHPEDIYQVLNENTSLP---TGINLD---SLK 492
           MH LL++ G E  R++ +     KR  L     I +VL+++T+      GI+L+   + +
Sbjct: 569 MHTLLEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGIHLELSNTEE 628

Query: 493 ELYLGGCSNLKRF-------------PE-ISCNIEDLDLKETAIEE----------LPSS 528
           EL +     L+R              PE +   ++DL      I            LPS+
Sbjct: 629 ELNISE-KVLERVHDFHFVRIDASFQPERLQLALQDLIYHSPKIRSLNWYGYESLCLPST 687

Query: 529 IGNLSRLVDLDL--TNCSGLKSVSSRLCNLK--------------------SLRRLNLSG 566
             N   LV+LD+  +N   L   + +L NLK                    +L  L L  
Sbjct: 688 F-NPEFLVELDMRSSNLRKLWEGTKQLRNLKWMDLSYSSYLKELPNLSTATNLEELKLRN 746

Query: 567 CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           C  L +LP  I  L SL+ L+L      EK+P +++  +KL +L+LQNC  L  LP L  
Sbjct: 747 CSSLVELPSSIEKLTSLQILDLENCSSLEKLP-AIENATKLRELKLQNCSSLIELP-LSI 804

Query: 626 GSSIHARH-----CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           G++ + +      C+SL  L +S   +T      ++F+ SNCS+
Sbjct: 805 GTATNLKQLNISGCSSLVKLPSSIGDIT----DLEVFDLSNCSS 844



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 82/161 (50%), Gaps = 29/161 (18%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP  INL SL  L L  CS LK FPEIS +I +L LK TAI+E+P SI + S L D  +
Sbjct: 871  ALPININLKSLDTLNLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSIMSWSPLADFQI 930

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +                             E L E     + +  L+L+ KD +++P  +
Sbjct: 931  S---------------------------YFESLMEFPHAFDIITKLHLS-KDIQEVPPWV 962

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            K++S+L DL L NC  L SLP+L      I+A +C SL+ L
Sbjct: 963  KRMSRLRDLSLNNCNNLVSLPQLSDSLDYIYADNCKSLERL 1003



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 12/191 (6%)

Query: 463 RSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE 519
           R+  W        L E  +L T  NL+ LK   L  CS+L   P   E   +++ LDL+ 
Sbjct: 714 RNLKWMDLSYSSYLKELPNLSTATNLEELK---LRNCSSLVELPSSIEKLTSLQILDLEN 770

Query: 520 -TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            +++E+LP+ I N ++L +L L NCS L  +   +    +L++LN+SGC  L KLP  IG
Sbjct: 771 CSSLEKLPA-IENATKLRELKLQNCSSLIELPLSIGTATNLKQLNISGCSSLVKLPSSIG 829

Query: 579 NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHC 634
           ++  LE  +L+       +PSS+  L  L  L ++ C +L++LP    L    +++   C
Sbjct: 830 DITDLEVFDLSNCSSLVTLPSSIGNLQNLCKLIMRGCSKLEALPININLKSLDTLNLTDC 889

Query: 635 TSLKTLSNSST 645
           + LK+    ST
Sbjct: 890 SQLKSFPEIST 900


>gi|227438193|gb|ACP30586.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1001

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 236/716 (32%), Positives = 350/716 (48%), Gaps = 115/716 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G+DVR NF+SH    L R+ I+ F D+++ R + I+P+L +AI  S+I++V+
Sbjct: 8   YDVFPSFSGEDVRKNFLSHFLKELDRKLIKAFKDNEIERSHSIAPALVTAIRTSRIAVVV 67

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---------GYCPS----- 121
           FS  YASS WCL+ELV+I+    + GQ+V+P+FY +DPS           G+  +     
Sbjct: 68  FSPKYASSSWCLDELVEIVRCMEELGQLVLPIFYGLDPSHVRKQTGKFGEGFAKTCKMKT 127

Query: 122 ----LGWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W     +  +           E+ +IE  VND+  KL +  PS + ++ VG+E 
Sbjct: 128 KAVKIRWQQALTVVANLLGYHSQNFNNEAKMIEVIVNDLLGKL-NFTPSKDFEECVGIED 186

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF---------MQ 217
            I E+   L   S E   +GIWG  GIGKTTIA A++  +S  F+ S F         M+
Sbjct: 187 HIAEMSLLLDMESEEVRMIGIWGPSGIGKTTIARALFGRLSRRFQCSVFIDRKFISKIME 246

Query: 218 NIRDES---------------EKVGGLANI---HLNFERRRLSRMKVLIVFYDLTDLKQI 259
             R  +                ++ G  +I   HL     RL   KVLI   DL D   +
Sbjct: 247 GYRGANPDDYNMKLSLQRHFLSEILGTRHIQIDHLGAVENRLKNQKVLISIDDLDDQVVL 306

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           D+L G+   F  GSR+I+ T+D   L+ H    + H++EV   S   +L +  R+ F QN
Sbjct: 307 DVLAGQAHWFGSGSRIIVVTKDRHFLRAHE---IDHIYEVCLPSEERALEILCRSDFKQN 363

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  GF +L+  V ++A  +PL L VLGS L+G     W   +  L+      I+K+L++
Sbjct: 364 SPREGFEKLAVEVTRHAGSLPLGLTVLGSTLRGRDNAYWMDILPTLQNGVGEKIEKILRI 423

Query: 380 SYDGLDDEEQN-IFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           SYDGLD EE   I+   AC F G     +   L+       +GI  LV KSL+ + ++ +
Sbjct: 424 SYDGLDREEDKVIYRHIACLFNGEKVPYIKLLLEDRNLGVNVGIENLVDKSLIHVRSDTV 483

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLK---E 493
            MH LLQE+G +IVR +SI +PG R  L   +DI  VL+EN  T    G+ LD  K   E
Sbjct: 484 EMHSLLQEIGRKIVRAQSIDEPGNREFLVDLDDICDVLSENSGTKKVLGVALDMDKIHDE 543

Query: 494 LYL-----GGCSNLK--------------------------------RFPEISC------ 510
           L++      G SNL+                                ++P + C      
Sbjct: 544 LHVHENAFKGMSNLRFLKFYTFGKEARLRLNESFDYLPSKLRLLCWDKYP-MRCLPSKFC 602

Query: 511 --NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
             N+  L++K + +E L   +  L  L  +DL     LK +   L    SL +L+L GC 
Sbjct: 603 PQNLVILEMKNSNLENLWEGVSPLGHLKKMDLWGSKNLKEIPD-LSKATSLEKLDLKGCS 661

Query: 569 KLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            L +LP  I  L  L  LN+ A  + E +P+ M  L  L+ L L+ C RL+  P +
Sbjct: 662 SLVELPSSISKLNKLTELNMPACTNLETLPTGM-NLESLNRLNLKGCTRLRIFPNI 716



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 46/217 (21%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTG+NL+SL  L L GC+ L+ FP IS NI +L L ET+I E PS++     L +L+L
Sbjct: 689 TLPTGMNLESLNRLNLKGCTRLRIFPNISRNISELILDETSITEFPSNL----YLENLNL 744

Query: 541 TNCSGLKS---------VSSRLCNLK-SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
            +  G+KS         ++  +  L  SLR L+LS    L +LP    NL +L  L++  
Sbjct: 745 FSMEGIKSEKLWERAQPLTPLMTMLSPSLRILSLSDIPSLVELPSSFHNLHNLTNLSITR 804

Query: 591 -KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-----------------ELPCGSSIHAR 632
            K+ E +P+ +  L  L  L L  C RL+S P                 E+P      +R
Sbjct: 805 CKNLEILPTRI-NLPSLIRLILSGCSRLRSFPDISRNVLDLNLIQTGIEEIPLWVEDFSR 863

Query: 633 -------HCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
                   C  LK +S S+       +H ++ +FSNC
Sbjct: 864 LKYLFMESCPKLKYVSISTL------RHLEMVDFSNC 894


>gi|297836989|ref|XP_002886376.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332217|gb|EFH62635.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 942

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 237/753 (31%), Positives = 373/753 (49%), Gaps = 135/753 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VF SF G+DVR  F+SH+        I  F D  + RG  I+P L   I  S+ISI++
Sbjct: 15  YHVFASFHGEDVRKTFLSHIRKQFICNGITMFDDQGIKRGKTITPELIQGIRESRISIIV 74

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGI-------- 127
            S+ YASS WCL+EL++IL+ +   GQIV+ VFY VD SD       G  GI        
Sbjct: 75  LSKNYASSSWCLDELLEILKCREDIGQIVMTVFYGVDTSDVR--KQTGEFGIAFNKTCAG 132

Query: 128 -----------------------FDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                                  F    +E+ +IE   N +S +L ++ PS + D +VG+
Sbjct: 133 KTEEESRRWSQALTDAANIAGVDFKNCKNEAEMIEEIANHVSNQL-NVTPSKDFDGMVGL 191

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           E+ ++E+ES L   S     VGI+G  GIGK+TIA A++S +S+ F+ + F+ +I+ ES 
Sbjct: 192 EAHLRELESLLDLDSVGVQMVGIYGPAGIGKSTIARALHSRLSNRFQHNCFV-DIQWESF 250

Query: 225 KVG----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           ++G                      GL   HL   + RLS+++VLI+  D+  +KQ++ L
Sbjct: 251 RIGFDDYGLKLRLQEKFLSNILDLSGLRISHLGAIKERLSKLRVLIILDDVNHMKQLEAL 310

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
                 F PGSR+I+TT + +LL  H    + + + V   S   +L +  R AF +++P 
Sbjct: 311 ANETTWFGPGSRIIVTTENKELLHQH---GINNTYHVGFPSDEKALKILCRYAFRKSYPH 367

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM-PHMDIQKVLKVSY 381
            GF +L+  V +    +PLAL+V+GS L+G +EEEWE  + +L  +  H DI++VL+V Y
Sbjct: 368 NGFKKLALRVTELCGNLPLALRVVGSSLRGKNEEEWEEVICRLDSIFDHQDIKEVLRVGY 427

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           + L + EQ++FL  + FF   D  LV   L       K G+  L  + +  IS +   ++
Sbjct: 428 ESLHENEQSLFLHISVFFNYRDVDLVTAMLADKNLDVKYGLKILGTREVSGISFDTSGIN 487

Query: 442 DLLQEMGG-------EIVRQESIKDPGKRSRLWHPEDI-----YQVLN----ENTSLPTG 485
           +++ + G          +R    KD G    ++ PE++      ++L+     + SLP  
Sbjct: 488 EVIIKKGAFKRMPNLRFLRVYKSKDDGN-DVVYIPEEMEFPRFLRLLDWEAYPSKSLPAN 546

Query: 486 INLDSLKELYLGG-----------------------CSNLKRFPEIS--CNIEDLDLKET 520
            N +SL EL L                           +LK+ P++S   N+E LD+   
Sbjct: 547 FNAESLVELILSDNQLEKLWEGSQHLPNLKKMDLRHSYDLKQLPDLSNATNLESLDVHLC 606

Query: 521 A-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           A + E PS IGNL +L +L +  C  L+ V + L NL SL  L++ GC +L+K P+   N
Sbjct: 607 ASLVEFPSYIGNLHKLEELKMGFCINLQVVPT-LVNLASLDYLDMKGCSQLKKFPDISTN 665

Query: 580 LES--------------------LEYLN---------LAEKDFEKIPSSMKQLSKLSDLR 610
           + +                    L+YL+         L   D EK+P  +K L +L  L+
Sbjct: 666 IRALVIADTILEELPRSIRLWSRLQYLSIYGSVKDPLLGRADIEKVPDWIKDLPRLQSLQ 725

Query: 611 LQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
           +  C +L SLPE+P    ++ A  C SL+TL++
Sbjct: 726 IFGCPKLASLPEIPSSLKTLIANTCESLETLAS 758



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 34/156 (21%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD-- 539
           +PT +NL SL  L + GCS LK+FP+IS NI  L + +T +EELP SI   SRL  L   
Sbjct: 636 VPTLVNLASLDYLDMKGCSQLKKFPDISTNIRALVIADTILEELPRSIRLWSRLQYLSIY 695

Query: 540 ------LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
                 L   + ++ V   + +L  L+ L + GC KL  LPE                  
Sbjct: 696 GSVKDPLLGRADIEKVPDWIKDLPRLQSLQIFGCPKLASLPE------------------ 737

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
             IPSS+K L          C+ L++L   P  S +
Sbjct: 738 --IPSSLKTLIA------NTCESLETLASFPIDSQV 765


>gi|357499355|ref|XP_003619966.1| Resistance protein [Medicago truncatula]
 gi|355494981|gb|AES76184.1| Resistance protein [Medicago truncatula]
          Length = 725

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 239/702 (34%), Positives = 358/702 (50%), Gaps = 112/702 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+ VFLSFRG D R+ F  +L  AL  + I TF+DD+ L RG+EI  SL +AIE S+I I
Sbjct: 17  KYQVFLSFRGSDTRYGFTGNLYKALTDKGIHTFMDDRELQRGDEIKRSLDNAIEESRIFI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSLG----- 123
            +FS  YASS +CL+ELV+I+  K K G++V+PVFY +DP++       Y  +L      
Sbjct: 77  PVFSANYASSSFCLDELVQIINCKEK-GRVVLPVFYGMDPTNVRHHRGIYGEALAKHEKR 135

Query: 124 -------------WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                        W           G    P  E   I   V DI  K   +        
Sbjct: 136 FQNDMDNMERLQRWKVALNQAANLSGYHFSPGYEYEFIGKIVRDILDKTERVLHVAKYP- 194

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            VG++S +++++  L   S E  + VG++G GG+GK+T+A AIY+ ++  FEG  F+  +
Sbjct: 195 -VGLKSRVEQVKLLLDMESDEGVHMVGLYGTGGMGKSTLAKAIYNFVADQFEGVCFLHKV 253

Query: 220 RDES--------EKVGGLANIHLNFE-----------RRRLSRMKVLIVFYDLTDLKQID 260
           R+ S        +K   L  + LN +           + RL+RMK+L++  D+  L+Q++
Sbjct: 254 RENSTHNSLKHLQKELLLKTVKLNIKLGDASEGIPLIKERLNRMKILLILDDVDKLEQLE 313

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G LD F  GSRVIITTRD  LL  H   R    + V  L   ++  L    AF    
Sbjct: 314 ALAGGLDWFGHGSRVIITTRDKHLLTCHGIERT---YAVNGLHETEAFELLRWMAFKNGE 370

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
             + + ++ N  + YA+G+PL L+++GS L G S EEW+  ++  +++P+ +IQ++LKVS
Sbjct: 371 VPSSYNDVLNRAVAYASGLPLVLEIVGSNLFGKSMEEWQCTLDGYEKIPNKEIQRILKVS 430

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG----KSLVTISNN 436
           YD L++E+Q++FLD AC FKG      + F D  ++     I   VG    KSL+     
Sbjct: 431 YDALEEEQQSVFLDIACCFKGGSW---IEFEDILKYHYGRCIKHHVGVLAEKSLIYQYGL 487

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYL 496
            + +HDL+++MG EIVRQES K+PG+RSRLW  +DI  VL ENT          ++ +YL
Sbjct: 488 SVRLHDLIEDMGKEIVRQESPKEPGERSRLWCHDDIIHVLEENTG------TSKIEMVYL 541

Query: 497 GGCSNLKRFPEISCN---------IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
             C + +  P I  N         ++ L ++     + P  + +  R++          K
Sbjct: 542 -HCPSTE--PVIDWNGKAFKKMKKLKTLVIENGHFSKGPKYLSSCLRVLKWKGYPS---K 595

Query: 548 SVSSRLCNLK--SLRRLNLSGCLKLEKLP--EEIGNLE---------------SLEYLNL 588
           S+SS   N K  +++ L L  C  L  +P   ++ NLE               S+ YLN 
Sbjct: 596 SLSSCFLNKKFENMKVLILDYCEYLTCIPNVSDLPNLEKLLFINCHNLITIHNSIGYLNK 655

Query: 589 AEKDFEKIPSSMK-----QLSKLSDLRLQNCKRLQSLPELPC 625
            E    K  S ++     QL+ L  L L  C RL+S PEL C
Sbjct: 656 LETLIAKYCSKLESFPPLQLASLKILELYECFRLKSFPELLC 697



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 25/147 (17%)

Query: 395 TACFFKGNDQYLVMNFLDACRFSAKI-GISRL--VGKSLVTISNNKITMHDLLQEMGGEI 451
           ++CF     + + +  LD C +   I  +S L  + K L    +N IT+H+ +    G +
Sbjct: 598 SSCFLNKKFENMKVLILDYCEYLTCIPNVSDLPNLEKLLFINCHNLITIHNSI----GYL 653

Query: 452 VRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC- 510
            + E++              I +  ++  S P  + L SLK L L  C  LK FPE+ C 
Sbjct: 654 NKLETL--------------IAKYCSKLESFPP-LQLASLKILELYECFRLKSFPELLCK 698

Query: 511 --NIEDLDLKETAIEELPSSIGNLSRL 535
             NI+++ L ET+I EL  S  NLS L
Sbjct: 699 MINIKEIRLSETSIRELSFSFQNLSEL 725


>gi|317415948|emb|CAR94514.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 2048

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 261/796 (32%), Positives = 386/796 (48%), Gaps = 166/796 (20%)

Query: 3   SSSSSINMIPHP----KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNE 57
           ++ +S  + P P    +++VFLSFRG D R  F  HL  AL R  I TF DD +L  G  
Sbjct: 6   TTQTSSALPPPPTRPLEYEVFLSFRGFDTRKGFTDHLYKALIRNGIHTFRDDEQLKSGKP 65

Query: 58  ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-- 115
           IS  L  AIE SKIS++I S  YA+S WCL+EL K++E  N   + ++PVFY V PS+  
Sbjct: 66  ISKELFKAIEESKISVIILSTNYATSTWCLDELAKMVELANNESRSILPVFYNVTPSEVR 125

Query: 116 -------------------------AGYCPSLGWMGI-----FDIPT--SESVLIEGNVN 143
                                    A +  SL  +       FD+     E+ +IE  V 
Sbjct: 126 EQTGDHFQEAFAQHDKDFEGEPGKVARWKNSLTAIAELEAEGFDLTNFRYETDMIEKIVE 185

Query: 144 DISKKLSDLFPSDNKDQLVGVESIIKEIESQ--LLSGSTEFNTVGIWGIGGIGKTTIASA 201
            I   L   F +D+    VG++ +  EI+S+  L  GS E   +GI G+ GIGK+T+A A
Sbjct: 186 RIFGVLIKTFSNDDLKDFVGMDRV-NEIKSKMSLCMGSEEVRVIGICGMPGIGKSTVAKA 244

Query: 202 IYSNISSHFEGSYFMQNIRDESEKVGGLANI------HLNFER-----------RRLSRM 244
           +   I S F+   F+  + + S+K  GL +I      HL  ++           +RL   
Sbjct: 245 LSQRIHSQFDAISFISKVGEISKK-KGLFHIKKQLCDHLLDKKVTTKDVDDVICKRLRDK 303

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDG------FVPGSRVIITTRDVQLLKNHRGSRVGHVFE 298
           +VLI+  ++ +L+QI+ + G  DG      F  GSR+I+TT D +LL ++       ++ 
Sbjct: 304 RVLIILDNVDELEQIEAVAGS-DGAGLSNRFGKGSRIIVTTTDERLLIDYNPE----IYT 358

Query: 299 VKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEW 358
           +++L+ + +L LF R A   +HP   F +LSN  + Y +G PLAL+V G  L    E+ W
Sbjct: 359 IEKLTPDQALLLFCRKALKTDHPTDAFKKLSNEFVDYIDGHPLALEVFGHSLWKREEDYW 418

Query: 359 ESAVNKLKRMPHMDIQK---VLKVSYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDAC 414
            + +  LK   +   +K   VLK S+DGL+++EQ ++FLDTACFFKG D   +    ++C
Sbjct: 419 STKLKSLKDKGYSGEKKIIGVLKASFDGLENQEQQDMFLDTACFFKGEDVCRLEKIFESC 478

Query: 415 RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
            +   I I+ L  KSLV+I   ++ MHDLLQ+MG  +V  ES K+ G+RSRLWH  D   
Sbjct: 479 GYYPGINITILCEKSLVSIVGGRLWMHDLLQKMGRGLVLGESKKE-GERSRLWHHTDALP 537

Query: 475 VLNEN--TSLPTGI------------------NLDSLKELYLGGCSNLKRFPEISCNIED 514
           VL +N  T    GI                  N+D+L+ L +           +S  +  
Sbjct: 538 VLKKNKGTDAVQGIFLSSPQPDKVHLKKDPFSNMDNLRLLKIYNVEFSGSLEYLSDELSL 597

Query: 515 LDLKETAIEELPSS-------------------------------IGNLS------RLVD 537
           L+  +  ++ LPSS                               + NLS      +  D
Sbjct: 598 LEWHKCPLKSLPSSFEPDKLVELNLSESEIEELWEEIERPLEKLAVLNLSDCQKLIKTPD 657

Query: 538 LD---------LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
            D         L  C+ L +V   + NL+SL    LSGC KL+KLPE   +++ L  L+L
Sbjct: 658 FDKVPNLEQLILKGCTSLSAVPDDI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHL 716

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLT 648
                E++P+S+K L+ L  L L++CK L SLP++          CTSL +L        
Sbjct: 717 DGTAIEELPTSIKHLTGLILLNLRDCKNLLSLPDVI---------CTSLTSLQ------- 760

Query: 649 RSSKHWDIFNFSNCSN 664
                  I N S CSN
Sbjct: 761 -------ILNVSGCSN 769



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 94/151 (62%), Gaps = 8/151 (5%)

Query: 481 SLPTGI--NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
           SLP  I  +L SL+ L + GCSNL   PE    + C +++L    TAI+ELP+SI +L+ 
Sbjct: 747 SLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC-LQELYASRTAIQELPTSIKHLTD 805

Query: 535 LVDLDLTNCSGLKSVSSRLC-NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
           L  L+L  C  L ++   +C NL SL+ LNLSGC  L +LPE +G+LE L+ L  +    
Sbjct: 806 LTLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLECLQELYASGTAI 865

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            +IP S+ QLS+L +L L  C +LQSLP LP
Sbjct: 866 SQIPESISQLSQLGELVLDGCSKLQSLPRLP 896


>gi|357440369|ref|XP_003590462.1| Disease resistance-like protein [Medicago truncatula]
 gi|355479510|gb|AES60713.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1035

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 240/721 (33%), Positives = 372/721 (51%), Gaps = 102/721 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           M S SSSI+      + VFLSFRG D R  F  HL     +EK             +I+P
Sbjct: 3   MQSHSSSISY--GFTYQVFLSFRGSDTRDGFTGHLY----KEK-------------KITP 43

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-C 119
           SL  AIE S+I I +FS  YASS +CL+ELV I+      G++V+PVF+ VDP+D  Y  
Sbjct: 44  SLLKAIEESRIFIPVFSTNYASSSFCLDELVHIIHCYKTKGRLVLPVFFGVDPTDVRYHT 103

Query: 120 PSLG----------------------WM----------GIFDIPTSESVLIEGNVNDISK 147
            S G                      W           G    P  E   I+  + DIS 
Sbjct: 104 GSYGEELAKHGERFQNNKKNMERLHQWKIALTQAANLSGYHYSPGYEYKFIQKIIKDISD 163

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNI 206
           +++ +F    K   VG++  ++++   L  G   E + VG++GIGG+GK+T+A AIY+ I
Sbjct: 164 RINRVFLHVAKYP-VGLQDQVQQVNLLLDKGYDDEVHMVGLYGIGGLGKSTLAKAIYNFI 222

Query: 207 SSHFEGSYFMQNIRDESE--------------------KVGGLANIHLNFERRRLSRMKV 246
           +  FEG  F++++R+ S                     K+GG++   +   ++RL R K+
Sbjct: 223 ADQFEGLCFLEDVREISTPYNLKHLQEKLLLKTVGLDIKLGGVSE-GIAIIKQRLCRKKI 281

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+  L+Q++ L G LD F  GS+VIITTR+  LL  H G    H   VK L    
Sbjct: 282 LLILDDVDKLEQLEALAGGLDWFGRGSKVIITTREKHLLTCH-GIESTHA--VKGLYVTK 338

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L    AF  N   + + ++ N  + YA+G+PL ++++GS L G S EEW+  ++  +
Sbjct: 339 ALELLRWMAFKHNKVPSSYDDVLNRAVSYASGLPLVIEIVGSNLFGKSIEEWKGTLDGYE 398

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRL 425
           ++P+  IQ++ K+SYD L+++EQ++FLD AC FKG     V   L A      K  +  L
Sbjct: 399 KIPNKKIQEIFKLSYDALEEDEQSVFLDIACCFKGYRLTEVEKILHAHYGHCIKHHVGVL 458

Query: 426 VGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG 485
           V KSL+ I+   +T+HDL+++ G EIVR+ES K+PG+R+RLW   DI  VL +NT   TG
Sbjct: 459 VEKSLIEINTQYVTLHDLIEDTGKEIVRKESRKEPGERNRLWCHNDIVHVLQKNTG--TG 516

Query: 486 INLDSLKELYLGGCS-------NLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
               +++ +Y    S       N K F ++S N++ L +K     + P  + +  R++  
Sbjct: 517 ----NIEMIYWNYPSMEPIIDWNRKAFKKMS-NLKTLIIKNGQFSKSPKYLPSTLRVLIW 571

Query: 539 DLTNCSGLKSVSSRLCNLK--SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEK 595
           +  N    KS+SS   N K  +++ L L+ C  L  +P ++ +L +LE  + A  D    
Sbjct: 572 EGYNA---KSLSSSFLNKKFENMKVLTLNFCEYLTHIP-DVSHLPNLEKFSFAYCDNLIT 627

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLP--ELPCGSSIHARHCTSLKTLSNSSTLLTRSSKH 653
           I +S+  L+KL  L  + C +L+S P  +L C   +    C SLK+       +T   + 
Sbjct: 628 IHNSIGYLNKLEVLDAEGCSKLESFPPLQLTCLKELKLSECESLKSFPELLGKMTNIEEI 687

Query: 654 W 654
           W
Sbjct: 688 W 688



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 32/170 (18%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L  LKEL L  C +LK FPE+     NIE++ L+ T+I ELP S  NLS L DL L+ 
Sbjct: 655 LQLTCLKELKLSECESLKSFPELLGKMTNIEEIWLRGTSIRELPFSFQNLSELRDLALSK 714

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKL----------------EKLPEEIGNLE----- 581
            SG+   SS +  + +L ++   GC  L                E L  E  NL      
Sbjct: 715 -SGILRFSSNIFMMPTLSKIYARGCRLLLPKHKDILSSTVASNVEHLILENNNLSDECIR 773

Query: 582 -------SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                  ++  L L+EK+ + +P  + +   L  LRL +CK L+ +  +P
Sbjct: 774 VVLTLCANVTCLRLSEKNMKILPECLSECHLLKVLRLDDCKSLEEIRGIP 823



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
            +++K L L  C  L   P++S   N+E         +  + +SIG L++L  LD   CS
Sbjct: 588 FENMKVLTLNFCEYLTHIPDVSHLPNLEKFSFAYCDNLITIHNSIGYLNKLEVLDAEGCS 647

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S       L  L+ L LS C  L+  PE +G + ++E + L      ++P S + LS
Sbjct: 648 KLESFPP--LQLTCLKELKLSECESLKSFPELLGKMTNIEEIWLRGTSIRELPFSFQNLS 705

Query: 605 KLSDLRLQNCKRLQ---SLPELPCGSSIHARHCTSL 637
           +L DL L     L+   ++  +P  S I+AR C  L
Sbjct: 706 ELRDLALSKSGILRFSSNIFMMPTLSKIYARGCRLL 741


>gi|357513735|ref|XP_003627156.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355521178|gb|AET01632.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1473

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 234/647 (36%), Positives = 328/647 (50%), Gaps = 86/647 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVFLSFRG+D R+   SHL+AAL  + I+T++D  L RG +I P+L+ AIE S +SIV
Sbjct: 7   KHDVFLSFRGEDTRYGITSHLHAALIHKSIKTYVDSLLERGEDIWPTLAKAIEESHVSIV 66

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           +FSE +A+S WCL ELVK+LE +   GQ+V+PVFY  DPSD            A +   L
Sbjct: 67  VFSENFATSTWCLEELVKVLECRKVKGQVVIPVFYKTDPSDIRNQTGSYENAFAKHERDL 126

Query: 123 G--------W-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
           G        W + + +  T           ES+LI+  VND+ +KL   +P    ++L G
Sbjct: 127 GTNDLKVLNWKVALAEAATISGWHTQTHKEESILIDKIVNDVLQKLQLRYP----NELEG 182

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           V    K  E Q+ S    F  +GIWG+GG+GKT IA  +++ + + ++   F  N ++ S
Sbjct: 183 VVRNEKNCE-QVESLVERFPRLGIWGMGGMGKTIIAKVLFAKLFAQYDHVCFA-NAKEYS 240

Query: 224 ----------EKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGS 273
                     E++   +N+   F  RRL   KVLIV  ++  L Q + L          S
Sbjct: 241 LSKLFSELLKEEISP-SNVGSAFHMRRLRSRKVLIVLDNMDSLDQFEYLCRDYGELNKDS 299

Query: 274 RVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVI 333
           R+IITTRD QLL      RV  ++EVK+  Y  SL LF   AF  ++P   +  L    I
Sbjct: 300 RLIITTRDRQLL----SGRVDWIYEVKQWEYPKSLELFCLEAFEPSNPREKYEHLLQRAI 355

Query: 334 KYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFL 393
            YA GVPLAL++L  +L+      WES+  KL       + KVLKVSYD LD  E+ IFL
Sbjct: 356 TYAGGVPLALKLLALHLRTRDIAFWESSFKKLDDHRDDKLHKVLKVSYDELDALEKKIFL 415

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITMHDLLQEMGGEIV 452
           D A FF G  +  V   LDAC F    GI  L  K+L+TISNN+ I MHDLLQ+MG +I+
Sbjct: 416 DIAFFFIGEKKESVTKILDACGFEPNSGIVVLKDKALITISNNQTIQMHDLLQKMGSDII 475

Query: 453 RQESIKDPGKRSRLWHP---------------EDIYQVLNENTSLP----TGINLDSLKE 493
             +  +DP   +RL                  E I   L++N  LP    T   + +L+ 
Sbjct: 476 CNDCGEDPAAHTRLSGSKARAVIEENKGSSSIEGITLDLSQNNDLPLSADTFTKMKALRI 535

Query: 494 LYLGGCSNLKRFPEISCNIED-----------LDLKETAIEELPSSIGNLSRLVDLDLTN 542
           L     SNL+R      N+              +      E LP        LV++ + +
Sbjct: 536 LKFHAPSNLQRCTNTYLNLPKFLEPFSNKLRYFEWNGYPFESLPQHF-YAKFLVEIRMPH 594

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            S +K +      L  L  ++LS C + EKLP       SL+++NL+
Sbjct: 595 -SNVKQLWQGTKELGKLEGIDLSECKQFEKLP-NFSKASSLKWVNLS 639



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 29/206 (14%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L+ L+++ + GC +L+ F   S  IE+LDL  T I+ L  SIG L +L  L+L +   L
Sbjct: 676 HLNFLEKISVDGCKSLEEFAVSSDLIENLDLSSTGIKTLDLSIGRLQKLKQLNLESLR-L 734

Query: 547 KSVSSRLCNLKSLRRLNLSGC-LKLEK--------------------------LPEEIGN 579
             +   L +++S+R L +SG  L +EK                          LP  +  
Sbjct: 735 NRIPKELSSVRSIRELKISGSRLIVEKKQLHELFDGLQSLQILHMKDFINQFELPNNVHV 794

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL-PCGSSIHARHCTSLK 638
              L  LNL   + + +P S+K+L +L  L L NC++L+ +PEL P  + ++A +CTSL 
Sbjct: 795 ASKLMELNLDGSNMKMLPQSIKKLEELEILSLVNCRKLECIPELPPLITLLNAVNCTSLV 854

Query: 639 TLSNSSTLLTRSSKHWDIFNFSNCSN 664
           ++SN   L T+        +FSN  N
Sbjct: 855 SVSNLKKLATKMIGKTKHISFSNSLN 880


>gi|16944812|emb|CAC82812.1| resistance gene-like [Solanum tuberosum subsp. andigenum]
          Length = 1101

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 234/706 (33%), Positives = 350/706 (49%), Gaps = 119/706 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLSFR                         D +L  G+ +S  L  AI+ S+++++
Sbjct: 22  KYDVFLSFRD------------------------DKRLENGDSLSKELVKAIKESQVAVI 57

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           IFS+ YA+SRWCLNE+VKI+E K + GQ+V+PVFY VDPSD                   
Sbjct: 58  IFSKNYATSRWCLNEVVKIMECKEENGQLVIPVFYDVDPSDVRKQTKSFAEAFAEHESRY 117

Query: 117 -----GYCPSLGW---------MGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                G      W         +  +DI    ES  I   VN+IS KL +   S   D +
Sbjct: 118 KDDVEGMQKVQRWRTALSEAADLKGYDIRERIESECIGELVNEISPKLCETSLSYLTD-V 176

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+++ +K++ S L     +   V IWG+GG+GKTTIA AI+  +SS F+G+ F+ + ++
Sbjct: 177 VGIDAHLKKVNSLLEMKIDDVRIVWIWGMGGVGKTTIARAIFDILSSKFDGACFLPDNKE 236

Query: 222 ESEKVGGLANIHL------------------NFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              ++  L +I L                  +   RRL   KVL+V  ++    Q+  L 
Sbjct: 237 NKYEIHSLQSILLSKLVGEKENCVHDKEDGRHLMARRLRLKKVLVVLDNIDHEDQLKYLA 296

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           G L  F  G+R+I TTRD   ++ +       V+ V  L  +D++ LF++ AF    P  
Sbjct: 297 GDLGWFGNGTRIIATTRDKHFIRKNDA-----VYPVTTLLEHDAVQLFNQYAFKNEVPDK 351

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
            F E++  V+ +A G+PLAL+V GS L       W SAV+++KR P   + + LKVSYDG
Sbjct: 352 CFEEITLEVVSHAEGLPLALKVWGSSLHKKDIHVWRSAVDRIKRNPSSKVVENLKVSYDG 411

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHD 442
           L+ E+Q IFLD ACF +G  Q  +   L++C F A  G+  L+ KSLV IS  + I MHD
Sbjct: 412 LEREDQEIFLDIACFLRGRKQTEIKQILESCDFGADDGLRVLIDKSLVFISEYDTIQMHD 471

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGI---------------- 486
           L+QEMG  IV  +  KD G+ +RLW  +D  +  N        I                
Sbjct: 472 LIQEMGKYIVTMQ--KDRGEVTRLWLTQDFEKFSNAKIQGTKAIEAIWIPEIQDLSFRKK 529

Query: 487 ---NLDSLKELYLGGC-----SNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
              +++ L+ LY+ G      SN +  P    N+   D  +   E LP+   +   LV L
Sbjct: 530 AMKDVEKLRILYINGFHTPDGSNDQYLPS---NLRWFDCCKYPWESLPAKF-DPDMLVHL 585

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
           DL   S L  + +       LRRL+LS C  L + P +  ++ +LEYL L E  + +++ 
Sbjct: 586 DLQQ-SSLFHLWTGTKKFPFLRRLDLSSCANLMRTP-DFTDMPNLEYLGLEECSNLKEVH 643

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH---CTSLKTL 640
            S++   KL  L L++CK L+S   + C  S+   H   C++L+  
Sbjct: 644 HSLRCSKKLIKLNLRDCKNLESFSYV-CWESLECLHLQGCSNLEKF 688



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 4/122 (3%)

Query: 489 DSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSI-GNLSRLVDLDLTNCS 544
           +SL+ L+L GCSNL++FP I   ++   ++ ++ + I +LPS+I  + S L +LDL+   
Sbjct: 672 ESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSLTELDLSGMK 731

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L ++S  +  LKSL  L +S C KL+ LPEEIG+LE+LE L        + PSS+ +L+
Sbjct: 732 NLATLSCSIGELKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLN 791

Query: 605 KL 606
           +L
Sbjct: 792 RL 793



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 18/152 (11%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKE---TAIEELPSSIGNLSRLVDLDLTNCS 544
           L SL  L +  CS LK  PE   ++E+L++ +   T I + PSSI  L+RL  L      
Sbjct: 743 LKSLVMLKVSYCSKLKSLPEEIGDLENLEILKAGYTLISQPPSSIVRLNRLKFLTFAKQK 802

Query: 545 ---GLKS--------VSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD 592
              GL+         V+  LC+LK+L   NLS C LK E LP++IG+L SLE LNL   +
Sbjct: 803 SEVGLEDEVHFVFPPVNQGLCSLKTL---NLSYCNLKDEGLPQDIGSLSSLEVLNLRGNN 859

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           FE +P S+ +LS L  L L +CK L  LPE P
Sbjct: 860 FEHLPQSLTRLSSLQSLDLLDCKSLTQLPEFP 891



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 30/160 (18%)

Query: 491 LKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLK 547
           L+ L L  C+NL R P+ +   N+E L L+E + ++E+  S+    +L+ L+L +C  L+
Sbjct: 605 LRRLDLSSCANLMRTPDFTDMPNLEYLGLEECSNLKEVHHSLRCSKKLIKLNLRDCKNLE 664

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS-------- 599
           S S  +C  +SL  L+L GC  LEK P   G L+    + +      K+PS+        
Sbjct: 665 SFSY-VC-WESLECLHLQGCSNLEKFPRIRGKLKPEIEIQVQRSGIRKLPSAIIQHQSSL 722

Query: 600 -------MKQLSKLS----------DLRLQNCKRLQSLPE 622
                  MK L+ LS           L++  C +L+SLPE
Sbjct: 723 TELDLSGMKNLATLSCSIGELKSLVMLKVSYCSKLKSLPE 762


>gi|357499249|ref|XP_003619913.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494928|gb|AES76131.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1018

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 241/700 (34%), Positives = 361/700 (51%), Gaps = 110/700 (15%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
           VFLSFRG D R+ F  +L  AL  + I TF DD  L RG+EI+PSL  AIE S+I I IF
Sbjct: 9   VFLSFRGSDTRNTFTGNLYKALVDKGIRTFFDDNDLQRGDEITPSLVKAIEESRIFIPIF 68

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG-------- 123
           S  YASS +CL+ELV I+        +V+PVFY V+P+        Y   L         
Sbjct: 69  SANYASSSFCLDELVHIIHCYKTKSCLVLPVFYDVEPTHIRHQSGSYGEYLTKHEERFQN 128

Query: 124 ----------WM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                     W           G    P   E   IE  V DIS  ++ +F +  K   V
Sbjct: 129 NEKNMERLRQWKIALTQAANLSGYHYSPHGYEYKFIEKIVEDISNNINHVFLNVAK-YPV 187

Query: 163 GVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G++S I++++  L  GS +  + VG++G GG+GK+T+A A+Y+ ++  FEG  F+ N+R 
Sbjct: 188 GLQSRIEQVKLLLDMGSEDVVHMVGLYGTGGMGKSTLAKAVYNFVADQFEGVCFLHNVR- 246

Query: 222 ESEKVGGLANIH-------LNFE-------------RRRLSRMKVLIVFYDLTDLKQIDL 261
           ES  +  L ++        + F+             + RLSR K+L++  D+  L+Q++ 
Sbjct: 247 ESSTLKNLKHLQKKLLSKIVKFDGKLEDVSEGIPIIKERLSRKKILLILDDVDKLEQLEA 306

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G LD F  GSRVIITTRD  LL  H G    H   V+EL+  ++L L  R AF  +  
Sbjct: 307 LAGGLDWFGHGSRVIITTRDKHLLACH-GITSTHA--VEELNETEALELLRRMAFKNDKV 363

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
            + + E+ N V+ YA+G+PLA+  +G  L G   E+W+  +++ + +P+ DIQ++L+VSY
Sbjct: 364 PSTYEEILNRVVTYASGLPLAIVTIGDNLFGRKVEDWKRILDEYENIPNKDIQRILQVSY 423

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAKIGISRLVGKSLVTI--SN 435
           D L+ +E+++FLD AC FKG     V   L A    C     +G+  L  KSL+     +
Sbjct: 424 DALEPKEKSVFLDIACCFKGCKWTKVKKILHAHYGHC-IEHHVGV--LAEKSLIGHWEYD 480

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELY 495
            ++T+HDL+++MG EIVRQES K+PG+RSRLW  +DI+ VL +NT        ++++ +Y
Sbjct: 481 TQMTLHDLIEDMGKEIVRQESPKNPGERSRLWFHDDIFDVLRDNTG------TENIEMIY 534

Query: 496 L--GGCSNLKRFPEISCNIEDLDLKETAIEE---------LPSSIGNLSRLVDLDLTNCS 544
           L  G  +    +  ++ N +  +LK   I++         LPSS+  L   +D D  + S
Sbjct: 535 LKYGLTARETEWDGMAFN-KMTNLKTLIIDDYKFSGGPGYLPSSLRYL-EWIDYDFKSLS 592

Query: 545 GLKS------------VSSRLCN------LKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
            + S             SS L +      L +L + +   C  L  +   IG+L  LE L
Sbjct: 593 CILSKEFNYMKVLKLDYSSDLTHIPDVSGLPNLEKCSFQFCFSLITIHSSIGHLNKLEIL 652

Query: 587 N-LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           N       E  P    QL  L    +  C+ L++ PEL C
Sbjct: 653 NAYGCSKLEHFPPL--QLPSLKKFEISKCESLKNFPELLC 690



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 9/158 (5%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SLK+  +  C +LK FPE+ C   NI+D+ +   +IEELP S  N S L  L ++ 
Sbjct: 666 LQLPSLKKFEISKCESLKNFPELLCKMRNIKDIKIYAISIEELPYSFQNFSELQRLKISR 725

Query: 543 CSGLKSVSSRLCN---LKSLRRLNLSG-CLKLEKLPEEIGNLESLEYLNLA-EKDFEKIP 597
           C           N     ++  ++L+G  L  E LP  +    ++ +L+L+   +F  +P
Sbjct: 726 CYLRFRKYYDTMNSIVFSNVEHVDLAGNLLSDECLPILLKWFVNVTFLDLSCNYNFTILP 785

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
             + +   L  L L+ C  L+ +  +P    S+ A +C
Sbjct: 786 ECLGECHCLRHLNLRFCGALEEIRGIPPNLESLFADNC 823



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 5/130 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
            + +K L L   S+L   P++S   N+E    +   ++  + SSIG+L++L  L+   CS
Sbjct: 599 FNYMKVLKLDYSSDLTHIPDVSGLPNLEKCSFQFCFSLITIHSSIGHLNKLEILNAYGCS 658

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+        L SL++  +S C  L+  PE +  + +++ + +     E++P S +  S
Sbjct: 659 KLEHFPP--LQLPSLKKFEISKCESLKNFPELLCKMRNIKDIKIYAISIEELPYSFQNFS 716

Query: 605 KLSDLRLQNC 614
           +L  L++  C
Sbjct: 717 ELQRLKISRC 726


>gi|357506067|ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1204

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 239/745 (32%), Positives = 361/745 (48%), Gaps = 146/745 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVF+SFRG D R+ FV HL A L R+ I TF DDK L +G  IS  L  AI+ S++SI
Sbjct: 12  KYDVFISFRGPDTRNTFVDHLYAHLTRKGISTFKDDKSLQKGESISLQLLQAIKDSRVSI 71

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------DA------- 116
           ++FS+ YASS WCL+E+  I ES  +   +V PVFY +DPS          DA       
Sbjct: 72  IVFSKDYASSTWCLDEMAAIDESSRRLKLVVFPVFYDIDPSHVRKRSGAYEDAFVLHNEL 131

Query: 117 ----------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                               S GW  + + P  +   IE  V  + KKL   F S + D 
Sbjct: 132 FKHDPDRVAQWRRAMTSLAGSAGW-DVRNKPEFDE--IEKIVEAVIKKLGHKF-SRSADD 187

Query: 161 LVGVESIIKEIESQLLSGSTE--FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           L+G++  I+ +ES+L   S    F  +GIWG+GGIGKTT+A+ +Y  IS  F+   +++N
Sbjct: 188 LIGIQPPIEALESRLKLSSRNGGFQVLGIWGMGGIGKTTLATVLYDRISYQFDTRCYIEN 247

Query: 219 IRDESEKVGGLANIHLNFERR---------------------RLSRMKVLIVFYDLTDLK 257
           +    E+ GG   +     RR                     RL   K+L+V  ++  ++
Sbjct: 248 VHKIYEE-GGANAVQKEILRRTIEEKILDTYSPPEIARIVRDRLQNKKLLVVLDNVDQIE 306

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+D L  +     P SR+II TRD  +L   R      V+EV+ ++              
Sbjct: 307 QLDELDIKRVFLRPESRLIIITRDQHIL---RACGADIVYEVELMN-------------- 349

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
                    EL   V+KY  G+PLA++V+GS+L   + ++W +A+++L+  P   I KVL
Sbjct: 350 ---------ELIPEVLKYTQGLPLAIRVIGSFLHSRNAKQWRAALDRLQNSPPDKILKVL 400

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           +VSY+GL++E++ IFL  ACFFKG  +  V   LDAC     IGI  L  KS++TI N +
Sbjct: 401 QVSYEGLEEEDKEIFLHVACFFKGERKDYVSRILDACGLHPDIGIPLLAEKSVITIKNEE 460

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN------ENTSLPTGINLDSL 491
           I MH++LQE+G +IVR E   +PG  SRLW   D + V+       E  ++      D  
Sbjct: 461 IHMHEMLQELGKKIVRGEHPDEPGFWSRLWLYRDFHHVMMTQKKAIEAKAIVLNQKEDDF 520

Query: 492 K--ELYLGGCSNLKR-----------------------------FPEISC-------NIE 513
           K  EL     S L+                              +P IS        ++ 
Sbjct: 521 KFNELRAEDLSKLEHLKLLILNHKNFSGRPSFLSNSLRYLLWNDYPFISLPSNFQPYHLV 580

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           +L+L  +++E+L + I  +  L  +DL+N   LK ++     +++L RL+ +GC+ L  +
Sbjct: 581 ELNLPGSSVEQLWTDIQQMPYLKRMDLSNSKNLK-MTPCFKGMQNLERLDFAGCISLWHV 639

Query: 574 PEEIGNLESLEYLNLAE------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE---LP 624
              IG L  L++L+L         +F ++  S    S L  L L  C +L++ P+   L 
Sbjct: 640 HPSIGLLRELQFLSLQNCTSLVCFEFGRVSES----SSLRVLCLSGCTKLENTPDFEKLL 695

Query: 625 CGSSIHARHCTSLKTLSNSSTLLTR 649
               +    CTSL  +  S   LT+
Sbjct: 696 NLEYLDMDQCTSLYKIDKSIGDLTK 720



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 30/168 (17%)

Query: 490 SLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGL 546
           SL+ L L GC+ L+  P+     N+E LD+ + T++ ++  SIG+L++L  L L  C+ L
Sbjct: 673 SLRVLCLSGCTKLENTPDFEKLLNLEYLDMDQCTSLYKIDKSIGDLTKLRFLSLRGCTNL 732

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLP---------------------------EEIGN 579
             +     N+ +L  L+L GC +   LP                           + IG 
Sbjct: 733 VIIPDSFNNMTNLMTLDLCGCSRFTNLPLGSVSSFHTQQSLISLDLSFCNISIVPDAIGE 792

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
           L  LE LNL   +F ++P ++++LS L+ L L +C RLQ  P +P  S
Sbjct: 793 LRGLERLNLQGNNFTELPCTIQRLSSLAYLNLSHCHRLQIWPLIPIES 840



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 67/137 (48%), Gaps = 6/137 (4%)

Query: 491 LKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLK 547
           LK + L    NLK  P      N+E LD     ++  +  SIG L  L  L L NC+ L 
Sbjct: 602 LKRMDLSNSKNLKMTPCFKGMQNLERLDFAGCISLWHVHPSIGLLRELQFLSLQNCTSLV 661

Query: 548 SVS-SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSK 605
                R+    SLR L LSGC KLE  P +   L +LEYL++ +     KI  S+  L+K
Sbjct: 662 CFEFGRVSESSSLRVLCLSGCTKLENTP-DFEKLLNLEYLDMDQCTSLYKIDKSIGDLTK 720

Query: 606 LSDLRLQNCKRLQSLPE 622
           L  L L+ C  L  +P+
Sbjct: 721 LRFLSLRGCTNLVIIPD 737


>gi|334183667|ref|NP_001185325.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196312|gb|AEE34433.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1051

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 238/716 (33%), Positives = 353/716 (49%), Gaps = 114/716 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR  F+SH++    R+ I  FID+++ RG  I   +  AI  SKI+IV+
Sbjct: 48  HQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEIIHAIRESKIAIVL 107

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------------ 117
            S  YASS WCL+ELV+I++ K ++ QIV+P+FY VDPSD                    
Sbjct: 108 LSRNYASSSWCLDELVEIMKCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKT 167

Query: 118 ------YCPSLGWMGI---FDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 +  +L  MG    +D     +E+ +IE    DIS  L+   PS + D L+G+ +
Sbjct: 168 NEVIRKWRQALAKMGTTTGYDSRNWDNEATMIENIATDISNMLNYSTPSRDFDGLIGMRA 227

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD----- 221
            +K +E  L   S E   +GIWG  GIGKTTIA  ++S  S  FE S FM+N+++     
Sbjct: 228 HMKVMEPMLCLHSDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENVKELMYTR 287

Query: 222 -------------ESEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                        + + +  + N       HL     RL   KV IV  ++    Q+D +
Sbjct: 288 PVCSDEYSAKLHLQKQFMSQIINHKDIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAI 347

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
                 F  GSR+IITT+D +LLK H G  + H++ V   S  ++  +F   AFGQ  P 
Sbjct: 348 AKESRWFGHGSRIIITTQDRKLLKAHDG--INHIYNVNFPSAYEACQIFCMYAFGQKFPK 405

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
            GF EL+  V K   G+PL L+V+GS+ +GMS+ EW +A+ +L+     +IQ +LK SY+
Sbjct: 406 DGFEELAWEVAKLLGGLPLGLRVMGSHFRGMSKHEWINALPRLRTRLDANIQSILKFSYN 465

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
            L +E++++FL  AC F       V   L     + K G+  L  KSL++I   +I MH+
Sbjct: 466 ALCEEDKDLFLYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIEGGRIKMHN 525

Query: 443 LLQEMGGEIVR----QESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS------ 490
           LL+++G EIVR     + I++PGKR  L    DI ++L  +T   +  GI+  S      
Sbjct: 526 LLEQLGKEIVRHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELSSE 585

Query: 491 --LKELYLGGCSNLK--RF-------------PE----ISCNIEDLDLKETAIEELPSSI 529
             + E    G  NLK  RF             P+    +S  ++ L+     +  +PS+ 
Sbjct: 586 LNISERAFEGMPNLKFLRFYYRYGDESDKLYLPQGLNYLSQKLKILEWDHFPLTCMPSNF 645

Query: 530 --------------------GN--LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
                               GN  L+ L  + L +   LK +   L    +L+ L L  C
Sbjct: 646 CTEYLVELNMRFSKLHKLWEGNRPLANLNWMYLNHSKILKELPD-LSTATNLQELFLVKC 704

Query: 568 LKLEKLPEEIGNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             L +LP  IG   +L+  YLN+     E +PSS+  L KL  L L  C +L+ LP
Sbjct: 705 SSLVELPSSIGKATNLQKLYLNMCTSLVE-LPSSIGNLHKLQKLTLNGCSKLEVLP 759



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  INL+SL EL L  C  LKRFPEIS NI+ L L  T I+E+PSSI +  RL DL+L+
Sbjct: 758 LPANINLESLDELDLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPSSIKSWPRLRDLELS 817

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK     L                         ++ +  Y N  + + ++IP  +K
Sbjct: 818 YNQNLKGFMHAL-------------------------DIITTMYFN--DIEMQEIPLWVK 850

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           ++S+L  L L  CK+L SLP+LP   S +   +C SL+ L  S
Sbjct: 851 KISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCS 893



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 8/143 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDL-KETAIEELPSSIGNLSRLVDLDLTNCS 544
           L +L  +YL     LK  P++S   N+++L L K +++ ELPSSIG  + L  L L  C+
Sbjct: 670 LANLNWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCT 729

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDFEKIPSSM 600
            L  + S + NL  L++L L+GC KLE LP  I NLESL+ L+L +    K F +I +++
Sbjct: 730 SLVELPSSIGNLHKLQKLTLNGCSKLEVLPANI-NLESLDELDLTDCLVLKRFPEISTNI 788

Query: 601 KQLSKLSDLRLQNCKRLQSLPEL 623
           K L  L     +    ++S P L
Sbjct: 789 KVLKLLRTTIKEVPSSIKSWPRL 811


>gi|22330441|ref|NP_176760.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6227009|gb|AAF06045.1|AC009513_1 Strong similarity to gb|AF098963 disease resistance protein
           RPP1-WsB from Arabidopsis thaliana and contains 2
           PF|00931 NB-ARC domains and 5 PF|00560 Leucine Rich
           Repeats [Arabidopsis thaliana]
 gi|332196311|gb|AEE34432.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1036

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 238/716 (33%), Positives = 353/716 (49%), Gaps = 114/716 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR  F+SH++    R+ I  FID+++ RG  I   +  AI  SKI+IV+
Sbjct: 33  HQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEIIHAIRESKIAIVL 92

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------------ 117
            S  YASS WCL+ELV+I++ K ++ QIV+P+FY VDPSD                    
Sbjct: 93  LSRNYASSSWCLDELVEIMKCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNVFKNNCVGKT 152

Query: 118 ------YCPSLGWMGI---FDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 +  +L  MG    +D     +E+ +IE    DIS  L+   PS + D L+G+ +
Sbjct: 153 NEVIRKWRQALAKMGTTTGYDSRNWDNEATMIENIATDISNMLNYSTPSRDFDGLIGMRA 212

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD----- 221
            +K +E  L   S E   +GIWG  GIGKTTIA  ++S  S  FE S FM+N+++     
Sbjct: 213 HMKVMEPMLCLHSDEVRMIGIWGPSGIGKTTIARILFSQFSDSFELSVFMENVKELMYTR 272

Query: 222 -------------ESEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                        + + +  + N       HL     RL   KV IV  ++    Q+D +
Sbjct: 273 PVCSDEYSAKLHLQKQFMSQIINHKDIEIPHLGVVEDRLKDKKVFIVLDNIDQSIQLDAI 332

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
                 F  GSR+IITT+D +LLK H G  + H++ V   S  ++  +F   AFGQ  P 
Sbjct: 333 AKESRWFGHGSRIIITTQDRKLLKAHDG--INHIYNVNFPSAYEACQIFCMYAFGQKFPK 390

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
            GF EL+  V K   G+PL L+V+GS+ +GMS+ EW +A+ +L+     +IQ +LK SY+
Sbjct: 391 DGFEELAWEVAKLLGGLPLGLRVMGSHFRGMSKHEWINALPRLRTRLDANIQSILKFSYN 450

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHD 442
            L +E++++FL  AC F       V   L     + K G+  L  KSL++I   +I MH+
Sbjct: 451 ALCEEDKDLFLYIACLFNNKRIEKVEEHLAEKSLNVKQGLHVLTEKSLISIEGGRIKMHN 510

Query: 443 LLQEMGGEIVR----QESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS------ 490
           LL+++G EIVR     + I++PGKR  L    DI ++L  +T   +  GI+  S      
Sbjct: 511 LLEQLGKEIVRHGLGHQPIREPGKRQFLVDTRDICELLTNDTGSKSVIGIHFYSSELSSE 570

Query: 491 --LKELYLGGCSNLK--RF-------------PE----ISCNIEDLDLKETAIEELPSSI 529
             + E    G  NLK  RF             P+    +S  ++ L+     +  +PS+ 
Sbjct: 571 LNISERAFEGMPNLKFLRFYYRYGDESDKLYLPQGLNYLSQKLKILEWDHFPLTCMPSNF 630

Query: 530 --------------------GN--LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
                               GN  L+ L  + L +   LK +   L    +L+ L L  C
Sbjct: 631 CTEYLVELNMRFSKLHKLWEGNRPLANLNWMYLNHSKILKELPD-LSTATNLQELFLVKC 689

Query: 568 LKLEKLPEEIGNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             L +LP  IG   +L+  YLN+     E +PSS+  L KL  L L  C +L+ LP
Sbjct: 690 SSLVELPSSIGKATNLQKLYLNMCTSLVE-LPSSIGNLHKLQKLTLNGCSKLEVLP 744



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 84/163 (51%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  INL+SL EL L  C  LKRFPEIS NI+ L L  T I+E+PSSI +  RL DL+L+
Sbjct: 743 LPANINLESLDELDLTDCLVLKRFPEISTNIKVLKLLRTTIKEVPSSIKSWPRLRDLELS 802

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK     L                         ++ +  Y N  + + ++IP  +K
Sbjct: 803 YNQNLKGFMHAL-------------------------DIITTMYFN--DIEMQEIPLWVK 835

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           ++S+L  L L  CK+L SLP+LP   S +   +C SL+ L  S
Sbjct: 836 KISRLQTLILNGCKKLVSLPQLPDSLSYLKVVNCESLERLDCS 878



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 8/143 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDL-KETAIEELPSSIGNLSRLVDLDLTNCS 544
           L +L  +YL     LK  P++S   N+++L L K +++ ELPSSIG  + L  L L  C+
Sbjct: 655 LANLNWMYLNHSKILKELPDLSTATNLQELFLVKCSSLVELPSSIGKATNLQKLYLNMCT 714

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDFEKIPSSM 600
            L  + S + NL  L++L L+GC KLE LP  I NLESL+ L+L +    K F +I +++
Sbjct: 715 SLVELPSSIGNLHKLQKLTLNGCSKLEVLPANI-NLESLDELDLTDCLVLKRFPEISTNI 773

Query: 601 KQLSKLSDLRLQNCKRLQSLPEL 623
           K L  L     +    ++S P L
Sbjct: 774 KVLKLLRTTIKEVPSSIKSWPRL 796


>gi|15242937|ref|NP_197661.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178243|dbj|BAB11675.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332005681|gb|AED93064.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 237/724 (32%), Positives = 362/724 (50%), Gaps = 102/724 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G+DVR  F+SH    L R+ I  F D+ + R   + P L  AI  S+I+IV+
Sbjct: 10  YDVFPSFSGEDVRVTFLSHFLKELDRKLISVFKDNDIQRSQSLDPELKLAIRDSRIAIVV 69

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GYCPS-- 121
           FS+ YA+S WCL+EL++I++ K ++GQIV+PVFY +DP                 C +  
Sbjct: 70  FSKNYAASSWCLDELLEIVKCKEEFGQIVIPVFYGLDPCHVRKQSGEFGIVFENTCQTKT 129

Query: 122 ----LGW-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 W   + D+            +E+ ++E   ND+  KL+    S++ +  VG+E 
Sbjct: 130 DDEIQKWRRALTDVANILGFHSSNWDNEATMVEDIANDVLAKLNLTTTSNDFEGFVGIEG 189

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN--IRDESE 224
            I +I   L     +    GIWG  GIGKTTIA A++S IS HF+GS F+    +    E
Sbjct: 190 HIAKISLMLCLECKQVRMFGIWGPSGIGKTTIARALFSRISRHFQGSVFLDRAFVSKSME 249

Query: 225 KVGGL------ANIHLNFE-------------------RRRLSRMKVLIVFYDLTDLKQI 259
              G       A +HL  +                     RL  MKVLI   DL D   +
Sbjct: 250 IYSGGNVDNYNAKLHLQGKFLSEILRAKDIKISNLGVVGERLKHMKVLIFIDDLDDQVVL 309

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           D L  +   F  GSR+I+ T+D Q  + H    +G  +EV   S   +L +FS++AF QN
Sbjct: 310 DALASKPHWFGCGSRIIVITKDKQFFRAH---GIGLFYEVGLPSDKLALEMFSQSAFRQN 366

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  GF EL++ V K +  +PLAL VLGS+L+G  +E+W   + +L++     I+K+L+V
Sbjct: 367 SPPPGFTELASEVSKRSGNLPLALNVLGSHLRGRDKEDWIDMLPRLRKGLDGKIEKILRV 426

Query: 380 SYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
            YD L + +++ IF   AC F G +   +   L        IG+  LV KSL+ I  + +
Sbjct: 427 GYDELSNKDDKAIFRLIACLFNGAEISYIKLLLADSNLGVTIGLKNLVDKSLIRIGCDTV 486

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKEL 494
            MH +LQEMG EIVR++SI +PG+R  L    DI  VLN+NT     L    ++  ++EL
Sbjct: 487 EMHSMLQEMGREIVREQSIYEPGEREFLVDSTDILDVLNDNTGTKKVLGISFDMSEIEEL 546

Query: 495 YLGGCSNLKRFP----------------EISCNIED------------LDLKETAIEELP 526
           ++      KR P                E   ++++            L   +  +  +P
Sbjct: 547 HIHK-RAFKRMPNLRFLRFYKKLGKQSKEARLHLQEGFDKFFPPKLKLLSWDDYPMRRMP 605

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLE 584
           S+  +   LV L + + S L+ +   +  L  LR + L G  KL+++P+     NLE+L 
Sbjct: 606 SNF-HAGYLVVLRMQH-SKLEKLWQGVQPLTCLREMQLWGSKKLKEIPDLSLATNLETL- 662

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLS 641
           YLN      E +PSS+K L+KL DL ++ C++L+ LP    L     +    C+ LK+  
Sbjct: 663 YLNDCSSLVE-LPSSIKNLNKLWDLGMKGCEKLELLPTDINLKSLYRLDLGRCSRLKSFP 721

Query: 642 NSST 645
           + S+
Sbjct: 722 DISS 725



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 58/105 (55%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT INL SL  L LG CS LK FP+IS NI +L L  TAIEE+P  I   SRL  L + 
Sbjct: 697 LPTDINLKSLYRLDLGRCSRLKSFPDISSNISELYLNRTAIEEVPWWIQKFSRLKRLRMR 756

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
            C  LK +S  +  LK L  L+ S C+   +    +     L+YL
Sbjct: 757 ECKKLKCISPNISKLKHLEMLDFSNCIATTEEEALVQQQSVLKYL 801



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 73/199 (36%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L  L+E+ L G   LK  P++S   N+E L L + +++ ELPSSI NL++L D       
Sbjct: 633 LTCLREMQLWGSKKLKEIPDLSLATNLETLYLNDCSSLVELPSSIKNLNKLWD------- 685

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDF------- 593
                            L + GC KLE LP +I NL+SL  L+L      K F       
Sbjct: 686 -----------------LGMKGCEKLELLPTDI-NLKSLYRLDLGRCSRLKSFPDISSNI 727

Query: 594 ----------EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNS 643
                     E++P  +++ S+L  LR++ CK+L+               C S     N 
Sbjct: 728 SELYLNRTAIEEVPWWIQKFSRLKRLRMRECKKLK---------------CIS----PNI 768

Query: 644 STLLTRSSKHWDIFNFSNC 662
           S L     KH ++ +FSNC
Sbjct: 769 SKL-----KHLEMLDFSNC 782


>gi|297791059|ref|XP_002863414.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309249|gb|EFH39673.1| hypothetical protein ARALYDRAFT_494346 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1170

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 248/736 (33%), Positives = 363/736 (49%), Gaps = 107/736 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG DVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSRNWL----YDVFLSFRGGDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY-- 118
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   IV+PVFY VDPS   +  
Sbjct: 57  DLEQAIKESRIAVVLFSKNYASSSWCLNELLEIVNCNDK---IVIPVFYGVDPSQVRHQI 113

Query: 119 -------------------------CPSLGWMGIFDIPT--SESVLIEGNVNDISKKLSD 151
                                       +  M  FD  T   E+ +IE   NDI  KL  
Sbjct: 114 GDFGSIFEKTCRRHSEEVKNQWKKALTDVANMLGFDSATWDDEAKMIEEIANDILGKLLL 173

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
             P D ++  VG+E  I  +   L   S E   VGIWG  GIGKTTIA A+++ +S +F+
Sbjct: 174 TTPKDFEN-FVGIEDHIANMSGLLQLESEEVRMVGIWGSSGIGKTTIARALFNQLSRNFQ 232

Query: 212 GSYFMQ--------------NIRDESEKV----GGLANI---------HLNFERRRLSRM 244
            S F+               N  D + K+      L+ I         HL     RL   
Sbjct: 233 VSKFIDRAFVYKSREIYSGANPDDHNMKLNLQESFLSEILRMPDIKIDHLGVLGERLQHQ 292

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KVLI+  DL D   +D L+G+   F  GSR+I+ T +   L+ H    + H++E+   + 
Sbjct: 293 KVLIIVDDLDDQVILDSLVGQTQWFGSGSRIIVVTNNKHFLRAH---GIDHIYELSLPTE 349

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
             ++ +  ++AF +  P  GF  L   V ++A  +PL L VLGS L+G  +E W   + +
Sbjct: 350 EHAVAMLCQSAFRKKSPPEGFEMLVVQVARHAGSLPLGLNVLGSCLRGRDKEYWVDMLPR 409

Query: 365 LKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           L+      I+K+L++SYDGL   E+Q IF   AC F   D   + + L   +    +G+ 
Sbjct: 410 LQNSLDDKIEKILRISYDGLGSAEDQAIFRHIACIFNHMDVTTIKSLLADSKLGVNVGLQ 469

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--NTS 481
            LV KSL+ +    + MH LLQEMG  IVR +SI   GKR  L  P DI  VL+E  +T 
Sbjct: 470 NLVDKSLIHVRWGHVEMHRLLQEMGQNIVRTQSIDKLGKREFLVDPNDICDVLSEGIDTR 529

Query: 482 LPTGINLDSLK-------ELYLGGCSNLKRFPEISCNI----EDLDLKETAIEELPSSIG 530
              GI+L++ K       +    G  NL RF +I  +I      LDL E +   LP ++ 
Sbjct: 530 KVLGISLETSKIDQLCVHKSAFKGMRNL-RFLKIGTDIFGEENRLDLPE-SFNYLPPTLK 587

Query: 531 NL----------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L                  LV L + N S L  +   +  L  L+ ++L G + L+++P
Sbjct: 588 LLCWSEFPMRCMPSNFRPENLVKLKMPN-SKLHKLWDGVVPLTCLKEMDLDGSVNLKEIP 646

Query: 575 E--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSI 629
           +     NLE+LE  N   K   ++PS ++ L+KL  L ++ C  L++LP    L     +
Sbjct: 647 DLSMATNLETLELGNC--KSLVELPSFIRNLNKLLKLNMEFCNNLKTLPTGFNLKSLGLL 704

Query: 630 HARHCTSLKTLSNSST 645
           + R+C+ L+T    ST
Sbjct: 705 NFRYCSELRTFPEIST 720



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 100/197 (50%), Gaps = 23/197 (11%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           +  N   +LPTG NL SL  L    CS L+ FPEIS NI DL L  T IEELPS++ +L 
Sbjct: 684 EFCNNLKTLPTGFNLKSLGLLNFRYCSELRTFPEISTNISDLYLTGTNIEELPSNL-HLE 742

Query: 534 RLVDLDLT-------NCSGLKSVSSRLCNLK-SLRRLNLSGCLKLEKLPEEIGNLESLEY 585
            LV+L ++          G+K ++  L  L  +L  L+L     L +LP    NL +LE 
Sbjct: 743 NLVELSISKEESDGKQWEGVKPLTPLLAMLSPTLTSLHLQNIPSLVELPSSFQNLNNLES 802

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSS 644
           L++   ++ E +P+ +  L  L  L  + C RL+S PE+           T++ +L+   
Sbjct: 803 LDITNCRNLETLPTGI-NLQSLYSLSFKGCSRLRSFPEI----------STNISSLNLDE 851

Query: 645 TLLTRSSKHWDIFNFSN 661
           T +      W I NFSN
Sbjct: 852 TGIEEVP--WWIENFSN 866



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 57/93 (61%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L   GCS L+ FPEIS NI  L+L ET IEE+P  I N S L  L +
Sbjct: 813 TLPTGINLQSLYSLSFKGCSRLRSFPEISTNISSLNLDETGIEEVPWWIENFSNLGLLSM 872

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             CS LK VS  +  LK L +++   C +L ++
Sbjct: 873 DRCSRLKCVSLHISKLKHLGKVDFKDCGELTRV 905


>gi|227438275|gb|ACP30627.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1226

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 258/778 (33%), Positives = 374/778 (48%), Gaps = 169/778 (21%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA++SS  +     ++DVFLSFRG D RH+F  +L   L R+ I+ FID++L RGN++S 
Sbjct: 1   MAAASSCKSDPSRRQYDVFLSFRGADTRHSFTCYLLDFLRRKGIDAFIDEELRRGNDLS- 59

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L   IE SKISIV+FSE YA+S WCL EL KI++ K  + Q+V+PVFY V  SD  Y  
Sbjct: 60  GLLERIEQSKISIVVFSENYANSAWCLEELAKIMDCKRTFDQVVLPVFYKVPASDVRY-- 117

Query: 121 SLGWMG--------IFD-----IPTSESVLIEGN----------------VNDISKK--- 148
             G  G        +F      +P  +  L   +                V+ I+K+   
Sbjct: 118 QTGKFGAPFERSEEVFQGSEHRVPAWKEALRAASDIAGYVLPERSPECDFVDKIAKETFK 177

Query: 149 -LSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
            L+ L PS+ +  L G+ES + E+E  +    ++    VG+ G+ GIGKTT+A  +Y   
Sbjct: 178 VLNKLSPSEFRG-LPGIESRMMELEKLIDFEETSCVRIVGVLGMAGIGKTTVADCVYKQN 236

Query: 207 SSHFEGSYFMQNIRDESE---------------------KVGGLANIHLNFERRRLSRMK 245
            + F+G  F+ N+++ES+                      VG     H  F + RL   K
Sbjct: 237 YNRFDGYCFLANVQNESKLHGLDHLQRKLLRKLLDEDNLDVGAPEGAHDAF-KDRLGNKK 295

Query: 246 VLIVFYDLTDLKQIDLLIGRL--DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
           + IV  D+ +  Q+  LIG    + +  G+R++ITT + +LL+      V   + V  LS
Sbjct: 296 LFIVLDDVANENQLRNLIGGAGKELYREGTRIVITTSNKKLLEK----VVNETYVVPRLS 351

Query: 304 YNDSLTLFSRNAFGQNHPAAG-FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
             +SL LF  +AF  N  A    ++LSN  + Y+ G PLAL++LGS L    +  W+   
Sbjct: 352 GRESLELFCLSAFSSNLCATPELMDLSNKFVDYSKGHPLALKLLGSDLCQRDKSYWKLKW 411

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
            +L+R P   I  VLKV Y+ L +EEQ+IFLD ACFF+      V + L      A   I
Sbjct: 412 ERLQRRPDGKIHDVLKVCYEELCEEEQSIFLDVACFFRSEKLDFVSSVLSTHHTDASTLI 471

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
           S L+ K L+T+S+N++ MHDLL  MG E+  + SIK+ G R RLW+ EDI +VL   T  
Sbjct: 472 SDLIDKCLITVSDNRLEMHDLLLTMGREVGYESSIKEAGNRGRLWNQEDICRVLKYKTGT 531

Query: 483 PT--GI-----NLDSLK---------------ELYLGGCSNLK------RFPE-ISCNIE 513
               GI     N+DS+K               + Y   CS         RFP+ + C  +
Sbjct: 532 AEIRGIFLDMSNVDSMKLSADIFARMWNLKFLKFYNSHCSKWCENDCRLRFPKGLDCFPD 591

Query: 514 D---LDLKETAIEELPSSIG---------------------------------------N 531
           +   L  +   +E LPS+                                         N
Sbjct: 592 ELVYLHWQGYPLEYLPSNFNPKKLVYLNLRYSNIMQLCEDEKNTGELRWVDLSYSKELMN 651

Query: 532 LSRLVD------LDLTNCSGLKSVSS------------RLC-NLKSL-RRLN-------- 563
           L+ L++      L+L NC+ L   S+            R C NLKSL +R++        
Sbjct: 652 LTGLLEARKLERLNLENCTSLTKCSAIRQMDSLVSLNLRDCINLKSLPKRISLKSLKFVI 711

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           LSGC KL+K P    N+ESL     A K   ++P S++ L KL+ L L+ C RL  LP
Sbjct: 712 LSGCSKLKKFPTISENIESLYLDGTAVK---RVPESIENLQKLTVLNLKKCSRLMHLP 766



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 112/255 (43%), Gaps = 73/255 (28%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL-------- 532
           SLP  I+L SLK + L GCS LK+FP IS NIE L L  TA++ +P SI NL        
Sbjct: 697 SLPKRISLKSLKFVILSGCSKLKKFPTISENIESLYLDGTAVKRVPESIENLQKLTVLNL 756

Query: 533 ---SRLVDLDLT-------------NCSGLKSV--------------------------- 549
              SRL+ L  T              CS L+S                            
Sbjct: 757 KKCSRLMHLPTTLCKLKSLKELLLSGCSKLESFPDINEDMESLEILLMDDTAIKQTPRKM 816

Query: 550 -----------SSRLCNLKSLRRLNLSGCLKLE----------KLPEEIGNLESLEYLNL 588
                       S++ +L  L  L  SGC +L           KLP+    L  L+ L L
Sbjct: 817 DMSNLKLFSFGGSKVHDLTCLELLPFSGCSRLSDMYLTDCNLYKLPDSFSCLSLLQTLCL 876

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
           +  + + +P S+K+L  L  L L++C++L SLP LP     + A  C SL+T++   TLL
Sbjct: 877 SRNNIKNLPGSIKKLHHLKSLYLKHCQQLVSLPVLPSNLQYLDAHGCISLETVAKPMTLL 936

Query: 648 TRSSKHWDIFNFSNC 662
             + ++   F F++C
Sbjct: 937 VVAERNQSTFVFTDC 951


>gi|298205187|emb|CBI17246.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/438 (41%), Positives = 258/438 (58%), Gaps = 33/438 (7%)

Query: 217 QNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVI 276
           QNI +  +    + N+ L F+R       V IV  D+ D  Q++ L+   D    GSRVI
Sbjct: 21  QNISNVGQGANMIKNV-LRFKR-------VFIVLDDIDDSDQLEYLLRNRDWLGKGSRVI 72

Query: 277 ITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYA 336
           ITTR  QLL+      +  V+EV+EL++  +  LFS  AF QN P   F+ LS+ V+ Y 
Sbjct: 73  ITTRSKQLLQ-----EMDDVYEVEELNFEQARELFSLYAFKQNLPKQDFIHLSDRVVYYC 127

Query: 337 NGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTA 396
           +G+PLAL+VLGS L   +  +WES + KL+R P + IQ VLK+S+DGLD  ++ IFLD A
Sbjct: 128 HGLPLALKVLGSLLFNKTIIQWESELCKLEREPEVKIQNVLKISFDGLDHTQKKIFLDIA 187

Query: 397 CFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQES 456
           CFFK  D+  V+  LD+C    +IGI  L  K L+++S NKI MHDL+QEMG  I+R E 
Sbjct: 188 CFFKEEDKDFVLRILDSCDLYVEIGIKVLCDKCLISLSKNKILMHDLIQEMGWNIIRSEF 247

Query: 457 IKDPGKRSRLWHPEDIYQVLNENTSLPTGIN-----------LDSLKELYLGGCSNLKRF 505
             DPGK SRLW P D+Y+           +N           LDSL+ +YL  CSNL+ F
Sbjct: 248 PDDPGKWSRLWDPSDVYRAFTMKKVTVKLVNLFKLHKNIIQYLDSLETIYLNNCSNLEEF 307

Query: 506 PEISCN----IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
           PE+  +    +  L    +AI+ELPSSI +L+ L +L +  C  L+S+ S +C LKSLR 
Sbjct: 308 PEMKRSSMKALSYLHFDGSAIKELPSSIEHLTGLKELYMKVCKNLRSLPSSICRLKSLRN 367

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L + GC  L+  PE + +++ LE+L+L     +++PSSM+ L  + +    +CK LQ +P
Sbjct: 368 LQVFGCSNLDTFPEIMEDMKYLEFLDLRGTGIKELPSSMEHLHNIGEF---HCKMLQEIP 424

Query: 622 ELPCG-SSIHARHCTSLK 638
           ELP     IHA H T L+
Sbjct: 425 ELPSSLPEIHA-HDTKLE 441


>gi|332330340|gb|AEE43926.1| TIR-NBS-LRR resistance protein muRdr1B [Rosa multiflora]
          Length = 1157

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 236/683 (34%), Positives = 348/683 (50%), Gaps = 84/683 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F   L   L R+ I TF DD +L RG  ISP L +AIE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTGFLYHELQRQGIRTFRDDPQLERGTVISPELLTAIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S   ASS WCL EL KILE   + G I+ P+FY VDPS                   
Sbjct: 78  VVLSPNSASSTWCLLELSKILECMEERGTIL-PIFYEVDPSHVRHQRGSFAEAFQEHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDLFPS----DNKDQL 161
                    G+  +L  +      TS+    E   + +I + L S + PS     + ++L
Sbjct: 137 FGVGNKKVEGWRDALTKVASLAGWTSKDYRYEKELIREIVQALWSKVHPSLTVFGSSEKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ + ++EI+  L   +++   +GIWG+GG+GKTT+A  +Y  IS  FE   F+ N+R+
Sbjct: 197 VGMHTKLEEIDVLLDIEASDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLTNVRE 256

Query: 222 ES------------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            S                  E+   + N++  +   +R      VL+V  D+   +Q++ 
Sbjct: 257 VSATHGLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVLLVLDDVDQSEQLEH 316

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  D F   SR+I TTR+ ++L  H    V   +E+K L+  ++L LFS  AF +  P
Sbjct: 317 LAGEKDWFGLRSRIIFTTRNQRVLVTHG---VEKPYELKGLNNAEALQLFSWKAFRKCEP 373

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              + EL    + +A G+PLAL+ LGS+L   S + W SA+ KL+  P   +  +LKVSY
Sbjct: 374 EEDYAELCKSFVMHAGGLPLALKTLGSFLYKRSPDAWNSALAKLRNTPDKTVFDMLKVSY 433

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITM 440
           DGLD+ E+ IFLD ACF        ++  L +      I I  LV +SLVTI SNN+I M
Sbjct: 434 DGLDEMEKKIFLDIACFSSQCQAKFIIELLYSYDVCIGIAIEVLVERSLVTISSNNEIGM 493

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLKELYLGG 498
           HDL++EMG EIVRQ+S ++PG  SRLW   DI+ V  +NT      GI L   K    G 
Sbjct: 494 HDLIREMGCEIVRQQSPEEPGGCSRLWLRNDIFHVFTKNTGTEAIEGIFLHLHK--LEGA 551

Query: 499 CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL---------------DLTNC 543
             N + F ++ CN++ L +    +   P S+ +  R++                 +LT  
Sbjct: 552 DWNPEAFSKM-CNLKLLYIHNLRLSLGPKSLPDALRILKWSWYPLKSLPPGFQPDELTEL 610

Query: 544 SGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPS 598
           S + S    L N    L +L+ + LS  + L + P+  G + +LE L L    +  KI  
Sbjct: 611 SFVHSNIDHLWNGIKYLGNLKSIVLSYSINLIRTPDFTG-IPNLEKLVLEGCTNLVKIHP 669

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L +L     +NCK +++LP
Sbjct: 670 SIALLKRLKIWNFRNCKSIKTLP 692



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 111/225 (49%), Gaps = 39/225 (17%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR ++W+  +   +     +LP+ +N++ L+   + GCS LK  PE    +  +  L L 
Sbjct: 675 KRLKIWNFRNCKSI----KTLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLCLG 730

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNC----------------------------SGLKSV 549
            TA+E+LPSSI +LS  LV LDL+                                L  V
Sbjct: 731 GTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPV 790

Query: 550 SSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            + L +  SL+ LNL+ C   E ++P +IG+L SLE L L   +F  +P+S+  L +L  
Sbjct: 791 LASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVSLPASIHLLCRLGS 850

Query: 609 LRLQNCKRLQSLPELPCGSSIHAR--HCTSLKTLSNSSTLLTRSS 651
           + ++NCKRLQ LPELP   S+     +CTSL+        L R S
Sbjct: 851 INVENCKRLQQLPELPVSGSLRVTTVNCTSLQVFPELPPDLCRLS 895


>gi|147799277|emb|CAN74723.1| hypothetical protein VITISV_014048 [Vitis vinifera]
          Length = 1448

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 253/731 (34%), Positives = 367/731 (50%), Gaps = 138/731 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE       
Sbjct: 20  YDVFLSFRGGDTRKNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIE------- 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
                   SRWCLNELVKI+E K++   IV+P+FY VDPSD       +  +L +     
Sbjct: 73  -------ESRWCLNELVKIIERKSQKESIVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 125

Query: 125 ------MGIFDIPTSESVLIEG-NVNDI--SKKLSDLFPSDNKDQLVGVESIIKEIESQL 175
                 +  + I   E+  + G +VND   ++ L   + ++   ++V  ++II+ +  Q 
Sbjct: 126 NQEKEMIQKWRIALREAANLSGCHVNDQLKTESLQHWYETEVVKEIV--DTIIRRLNHQP 183

Query: 176 LSG------------------STEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSY 214
           LS                   +TE N V + GI GIG   KTTIA AIY+ IS  ++G+ 
Sbjct: 184 LSMGKNIVGIGVHLEKLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGNS 243

Query: 215 FMQNIRDES---------EKVGGL----------ANIHLNFERRRLSRMKVLIVFYDLTD 255
           F+ NI++ S         E + GL           +  ++  +R LS  +VL++F D+ +
Sbjct: 244 FLINIKERSKGDILQLQQELLHGLLRGNFFKINNVDEGISMIKRCLSSNRVLVIFDDVDE 303

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           LKQ++ L    D F   S +IIT+RD  +L  + G+ +   +EV +L+  +++ LFS  A
Sbjct: 304 LKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQY-GADIR--YEVSKLNKEEAIELFSLWA 360

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F QN P   +  LS  +I YANG+PLAL+VLG+ L G     WESA+ KLK MPHM+I  
Sbjct: 361 FKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIHN 420

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           VL++S+DGLDD ++ IFLD ACFFKG+D+  V   L      A+  I+ L  + L+T+S 
Sbjct: 421 VLRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRILGP---HAEHAITTLDDRCLITVSK 477

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------------- 482
           N + MHDL+Q+MG EI+RQE  KD G+RSRLW   + Y VL  N+               
Sbjct: 478 NMLDMHDLIQQMGWEIIRQECPKDLGRRSRLW-DYNAYHVLIRNSGTKAIEGLFLDRCKF 536

Query: 483 -PTGINLDSLKE---LYLGGCSNLKR-----------FPEISCNIEDLDLKETAIEELPS 527
            P+ +  +S KE   L L    N +R           F   S  +  L      +E LP 
Sbjct: 537 NPSQLTTESFKEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDGYPLESLPM 596

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL----------------- 570
           +  +   LV+L L N S +K +         LR ++LS  + L                 
Sbjct: 597 NF-HAKNLVELLLRN-SNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTL 654

Query: 571 -EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
            E+ PE  GN+  L  L+L+      +PSS+  L+ L  L L+ C +L  +P   C    
Sbjct: 655 EERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHIC---- 710

Query: 630 HARHCTSLKTL 640
              H +SLK L
Sbjct: 711 ---HLSSLKVL 718



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 4/126 (3%)

Query: 503 KRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
           +RFPEI  N+ +L   DL  TAI +LPSSI +L+ L  L L  CS L  + S +C+L SL
Sbjct: 656 ERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSL 715

Query: 560 RRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           + L+L  C  +E  +P +I +L SL+ LNL    F  IP+++ QLS+L  L L +C  L+
Sbjct: 716 KVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFGSIPTTINQLSRLEILNLSHCSNLE 775

Query: 619 SLPELP 624
            +PELP
Sbjct: 776 QIPELP 781



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 98/223 (43%), Gaps = 52/223 (23%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            TSLP+ I    SL  L   GCS L+ FPEI  ++E L    L  T I+E+PSSI +L  L
Sbjct: 1054 TSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLDGTTIKEIPSSISHLRGL 1113

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD--- 592
              L L  C  L ++   +CNL SL+ L +  C    K P+ +G L SL+ L ++  D   
Sbjct: 1114 HTLSLYQCKNLVNLPESICNLTSLKNLGVRRCPNFNKFPDNLGRLRSLKSLFISHLDSMD 1173

Query: 593  --------------------------------------------FEKIPSSMKQLSKLSD 608
                                                        F +IP  + QL  L  
Sbjct: 1174 FQLPSLSGLCSLKLLMLHACNLREIPSGIYYLSSLVLLYLGRNHFSRIPDGISQLYNLKL 1233

Query: 609  LRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
            L L +CK LQ +PELP     +   +CTSL+ LS+ S LL  S
Sbjct: 1234 LDLSHCKMLQHIPELPSSLMYLDVHNCTSLENLSSQSNLLWSS 1276



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 63/129 (48%), Gaps = 13/129 (10%)

Query: 512  IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
             E  D+ E  I E P  + +L       L NC  L S+ S +   KSL  L+ SGC +LE
Sbjct: 1025 FEGSDMNEVPIIENPLELDSLC------LRNCKNLTSLPSSIFGFKSLATLSCSGCSQLE 1078

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
              PE + ++ESL  L L     ++IPSS+  L  L  L L  CK L +LPE  C      
Sbjct: 1079 SFPEILQDMESLRKLYLDGTTIKEIPSSISHLRGLHTLSLYQCKNLVNLPESICN----- 1133

Query: 632  RHCTSLKTL 640
               TSLK L
Sbjct: 1134 --LTSLKNL 1140



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEE--LPSSIGNLSRL 535
           LP+ I +L+ L+ L L  CS L + P   C++  L   DL    I E  +PS I +LS L
Sbjct: 681 LPSSITHLNGLQTLLLEECSKLHKIPSHICHLSSLKVLDLGHCNIMEGGIPSDICHLSSL 740

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
             L+L       S+ + +  L  L  LNLS C  LE++PE
Sbjct: 741 QKLNLER-GHFGSIPTTINQLSRLEILNLSHCSNLEQIPE 779


>gi|357469227|ref|XP_003604898.1| Nbs-lrr resistance protein [Medicago truncatula]
 gi|355505953|gb|AES87095.1| Nbs-lrr resistance protein [Medicago truncatula]
          Length = 1191

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 201/521 (38%), Positives = 287/521 (55%), Gaps = 60/521 (11%)

Query: 7    SINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSS 64
            S N    PK +DVFLSFRG+D R  F+SHL ++L  E I  F DD ++ RG++IS SL  
Sbjct: 584  SSNKTDQPKVYDVFLSFRGEDSRAKFMSHLFSSLQNEGIHAFKDDNEIQRGDQISISLLR 643

Query: 65   AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------- 116
            AI  S+ISI++ S  YA+SRWC+ EL KI+E     G IVVPVFY V PS+         
Sbjct: 644  AIGQSRISIIVLSTNYANSRWCMLELEKIMEIGRTKGLIVVPVFYEVAPSEVRDQKGRFG 703

Query: 117  ------------GYCPSLGWM-GIFDIPTSESVLIEGNVND------ISKKLSDLFPSDN 157
                               W   +FDI      ++ G+ N+      I ++++ L     
Sbjct: 704  KAFKKLISKISMDESKKSNWRRDLFDIGGIAGFVLLGSRNESADIKNIVERVTHLLDRTK 763

Query: 158  ---KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
                +  VG+ES +  +   L    ++   +GIWG+GG GKTTIA AIY+ I S FEG  
Sbjct: 764  LFVAEHPVGLESRVDTVIKLLNIKKSDVLLLGIWGMGGTGKTTIAKAIYNQIGSKFEGMS 823

Query: 215  FMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL-------- 266
            F+  +R+  E    L ++          + +VL   Y  T  K  D+  G++        
Sbjct: 824  FLLGVREFWETHTNLVSL----------QQQVLCDVYKTTTSKIHDIESGKIILKQRLAQ 873

Query: 267  ---DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
               + F  GSR+IITTRD++LL++        ++ +KE+  ++SL LFS +AF    P  
Sbjct: 874  KSREWFGSGSRIIITTRDMRLLRS-----CDQLYAIKEMDESESLELFSWHAFKLPSPPI 928

Query: 324  GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
             F   S  VI Y+  +PLAL+VLGSYL      EW+  + KLK +PH  +QK L+VS+DG
Sbjct: 929  DFATHSTDVIAYSGRLPLALEVLGSYLSDCEITEWQKVLEKLKCIPHDQVQKKLRVSFDG 988

Query: 384  LDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMH 441
            L D  EQ IFLD ACFF G DQ  V+  L+ C F A  G+  L+ +SLVT+ N NK+ +H
Sbjct: 989  LKDVTEQQIFLDIACFFIGMDQNDVIQILNGCGFFADSGMKILLERSLVTVDNGNKLRVH 1048

Query: 442  DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
            DLL++MG +I+ +ES  DP  RSRLW  +++  +L  +++L
Sbjct: 1049 DLLRDMGRQIIYEESPLDPENRSRLWRSDEVIDMLYNDSNL 1089



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/304 (37%), Positives = 169/304 (55%), Gaps = 24/304 (7%)

Query: 174 QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN----------IRDES 223
           QLL  S     +GIWG+ GIGK++I  AI + I  +FE   F++N          +  E 
Sbjct: 284 QLLKQSKSPLILGIWGMPGIGKSSIVHAICNQIGPYFEHMSFLENAEGLWKDKLQVYLEE 343

Query: 224 EKVGGL-----ANIHLNFERRRLSRMK-----VLIVFYDLTDLKQIDLLIGRLDGFVPGS 273
           E +  +      NI     RR +S+ K     VL++  ++  L Q+  L G  + F  GS
Sbjct: 344 ELIFHIDEQFERNISTTEARRMISKEKLRHKRVLLILDNVDKLDQLKALCGNREWFGRGS 403

Query: 274 RVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVI 333
           ++IITTRD  LLK H    V +++ VK+L  ++SL LF+  AF Q      F+ELS  V+
Sbjct: 404 KIIITTRDRHLLKKHG---VDYIYGVKQLDESESLELFNLGAFRQATSGKDFVELSRQVV 460

Query: 334 KYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFL 393
            Y+ G+PLAL+VLGS L     + WES ++ LK  P  ++Q+VL+ S++ L D E+ +FL
Sbjct: 461 AYSGGLPLALKVLGSNLYSKRVDFWESELHLLKMFPLQEVQRVLEDSFNDLSDVERRVFL 520

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIV 452
           D A FF G +Q  V+  L+       + IS L  KS VTI  NN + MH LLQ M  +++
Sbjct: 521 DIALFFIGMNQNDVLETLNRSTQCTDLQISLLQDKSFVTIDENNNLQMHVLLQSMARDVI 580

Query: 453 RQES 456
           R++S
Sbjct: 581 RRKS 584


>gi|298953303|gb|ADI99936.1| TIR-CC-NBS-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 991

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 243/723 (33%), Positives = 373/723 (51%), Gaps = 115/723 (15%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
           SSSS   +P    DVFLSFRG+D R NF SHL+ ALC++ I  FIDD KL RG EI  SL
Sbjct: 7   SSSSHLRLPF---DVFLSFRGEDTRSNFTSHLHMALCQKGINVFIDDDKLPRGEEICTSL 63

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDA----- 116
             AIE SKISIVI SE YASS WCL+EL+KI+  +K+   Q+V PVFY VDPS       
Sbjct: 64  LKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVDPSHVRRQRG 123

Query: 117 ------------------GYCPSLGW---MGIFDIPT--SESVLIEGNVNDISKKLSDLF 153
                              +  +L +   M  +D+    +E+ LI+  V ++ KKL +  
Sbjct: 124 VFGEEFAKLQVRFSNKMQAWSEALTFISTMSGWDLKNYENEASLIQIIVQEVRKKLKNSA 183

Query: 154 PS--DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            +  D     VG++  +  +   ++S   E   VG++GIGG+GKTT+A A+Y+ IS  FE
Sbjct: 184 TTELDVAKYPVGIDIQVSNLLPHVMSN--EITMVGLYGIGGMGKTTLAKALYNKISDDFE 241

Query: 212 GSYFMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVF 250
           G  F+ N+R+ S +  GL  +                      ++  R RL   K++++ 
Sbjct: 242 GCCFLANVREASNQYRGLVELQKTLIREILMDDSIKVSNVGIGISIIRDRLCSKKIILIL 301

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+   +Q+  L G  D F  GS+VI TTR+ QLL +H G  +  +  V  L+  + L L
Sbjct: 302 DDIDTHEQLQALAGGHDWFGHGSKVIATTRNKQLLASH-GFNI--LKRVNGLNAIEGLEL 358

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMP 369
           FS +AF  +HP++ +L++S   + Y  G+PLAL+VLGS+L  + ++ ++E  +++ +   
Sbjct: 359 FSWHAFKNSHPSSDYLDVSKRAVHYCKGLPLALEVLGSFLNSIDDQSKFERILDEYEN-S 417

Query: 370 HMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC--RFSAKIGISRL 425
           ++D  IQ +L++SYD L+ + + IFL  +C F   D+  V   L  C  RF  ++GI +L
Sbjct: 418 YLDKGIQDILRISYDELEQDVKEIFLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKL 477

Query: 426 VGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE------ 478
              SL+TI   N++ MHDL+Q+MG  I   E+  +  KR RL   +D+  VLN       
Sbjct: 478 TDLSLLTIDKFNRVEMHDLIQQMGHTIHLLET-SNSHKRKRLLFEKDVMDVLNGDMEARA 536

Query: 479 ------NTSLPTGINLDS--------LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE 524
                 N   PT +++DS        L  L +   ++ K    +  ++  +   +     
Sbjct: 537 VKVIKLNFHQPTELDIDSRGFEKVKNLVVLKVHNVTSSKSLEYLPSSLRWMIWPKFPFSS 596

Query: 525 LPSSIGNLSRLVDLDLT------------NCSGLKSVS----------SRLCNLKSLRRL 562
           LPS+  +L +L +L +             NC  LK ++          S L +  +L  L
Sbjct: 597 LPSTY-SLEKLTELSMPSSFIKHFGNGYLNCKWLKRINLNYSKFLEEISDLSSAINLEEL 655

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAEKD--FEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           NLS C KL ++ E +G+L  L  L L+     F + PS++K L  L  L +  C+ ++S 
Sbjct: 656 NLSECKKLVRVHESVGSLGKLAKLELSSHPNGFTQFPSNLK-LKSLQKLVMYECRIVESY 714

Query: 621 PEL 623
           P  
Sbjct: 715 PHF 717



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 32/211 (15%)

Query: 414 CRFSAKIGISRLVGKSLVTISN--NKITMHDLLQEMGGEIVR-QESIKDPGKRSRLW--- 467
           C++  +I ++    K L  IS+  + I + +L      ++VR  ES+   GK ++L    
Sbjct: 626 CKWLKRINLN--YSKFLEEISDLSSAINLEELNLSECKKLVRVHESVGSLGKLAKLELSS 683

Query: 468 HPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFP----EISCNIEDLDLKETAIE 523
           HP       N  T  P+ + L SL++L +  C  ++ +P    E+  ++++L ++  ++ 
Sbjct: 684 HP-------NGFTQFPSNLKLKSLQKLVMYECRIVESYPHFSEEMKSSLKELRIQSCSVT 736

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           +L  +IGNL+ L  L +  C  L ++   L   + +  +N  GC  L + P+ I    S 
Sbjct: 737 KLSPTIGNLTGLQHLWIDVCKELTTLPKILKVPEGVIYMNAQGCRSLARFPDNIAEFISC 796

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
                   D E +    KQL     + + NC
Sbjct: 797 --------DSEYVDGKYKQL-----ILMNNC 814



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 37/192 (19%)

Query: 480 TSLPTGINLDSLKELYLGG------------CSNLKR--------FPEIS-----CNIED 514
           +SLP+  +L+ L EL +              C  LKR          EIS      N+E+
Sbjct: 595 SSLPSTYSLEKLTELSMPSSFIKHFGNGYLNCKWLKRINLNYSKFLEEISDLSSAINLEE 654

Query: 515 LDLKETA-IEELPSSIGNLSRLVDLDLT-NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
           L+L E   +  +  S+G+L +L  L+L+ + +G     S L  LKSL++L +  C  +E 
Sbjct: 655 LNLSECKKLVRVHESVGSLGKLAKLELSSHPNGFTQFPSNL-KLKSLQKLVMYECRIVES 713

Query: 573 LP---EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL---PCG 626
            P   EE+ +  SL+ L +      K+  ++  L+ L  L +  CK L +LP++   P G
Sbjct: 714 YPHFSEEMKS--SLKELRIQSCSVTKLSPTIGNLTGLQHLWIDVCKELTTLPKILKVPEG 771

Query: 627 S-SIHARHCTSL 637
              ++A+ C SL
Sbjct: 772 VIYMNAQGCRSL 783


>gi|296081089|emb|CBI18283.3| unnamed protein product [Vitis vinifera]
          Length = 1183

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 198/479 (41%), Positives = 279/479 (58%), Gaps = 56/479 (11%)

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDESE-----------------KVGGLANIH--LN 235
           KTTIA AIY+ IS  ++GS F++N+R+ S+                 K   ++N+   +N
Sbjct: 22  KTTIAKAIYNEISYQYDGSSFLRNMRERSKGDILQLQKELLHGILKGKGFRISNVDEGVN 81

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             +R L+  +VL++FYD+ DL Q++ L    D F   S +IIT+RD Q+L  H G  +  
Sbjct: 82  MIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDWFDVKSTIIITSRDKQVLA-HYGVHIS- 139

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            +EV + +  +++ LFS  AF QN P   +  LS  +I+YA+G+PLAL++LG+ L G   
Sbjct: 140 -YEVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYNMIEYADGLPLALKLLGASLFGKKI 198

Query: 356 EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR 415
            EWESA+ KLKR+PHM+I KVL++S+DGLDD ++ IFLD ACFFK  D+Y V   L    
Sbjct: 199 SEWESALYKLKRIPHMEINKVLRISFDGLDDMDKKIFLDVACFFKEKDKYFVSRILGP-- 256

Query: 416 FSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQV 475
             A+ GI+ L  K L+TIS N I MHDL+Q+MG EI+RQE  +D G+RSR+W   D Y V
Sbjct: 257 -HAEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRVWD-SDAYHV 314

Query: 476 LNEN--TSLPTGINLDSLK--------------------ELYLG---GCSNLKRFPEISC 510
           L  N  T    G+ LD  K                    +++ G      +LKRFPEI  
Sbjct: 315 LTRNMGTRAIEGLFLDICKFDPIQFAKESFKQMDRLRLLKIHKGDEYDLISLKRFPEIKG 374

Query: 511 N---IEDLDLKETAIEELPSSI-GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
           N   + +LDL  TAI+ LPSS+  +L  L  L     S L  +   +C L SL  L+LS 
Sbjct: 375 NMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSH 434

Query: 567 CLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           C  +E  +P +I +L SL+ LNL   DF  IP+++ QLS+L  L L +C+ LQ +PELP
Sbjct: 435 CNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELP 493



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 103/222 (46%), Gaps = 52/222 (23%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I    SL  L   GCS L+ FPEI  ++   + LDL  TAI+E+PSSI  L  L 
Sbjct: 799  SLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQ 858

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD---- 592
             L+L  C  L ++   +CNL SLR L +  C KL KLPE +G L+SLEYL + + D    
Sbjct: 859  YLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNC 918

Query: 593  -------------------------------------------FEKIPSSMKQLSKLSDL 609
                                                       F  IP  + QL  L   
Sbjct: 919  QLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVF 978

Query: 610  RLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
             L +C+ LQ +PELP     + A  C+SL+ LS+ STLL  S
Sbjct: 979  DLSHCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTLLWSS 1020



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 13/129 (10%)

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
            +D D+KE  I E PS +  L       L +C  LKS+ S +C  KSL  L+ SGC +LE
Sbjct: 769 FKDSDMKELPIIENPSELDGLC------LRDCKTLKSLPSSICEFKSLTTLSCSGCSQLE 822

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
             PE + ++   + L+L     ++IPSS+++L  L  L L  C+ L +LPE  C      
Sbjct: 823 SFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESIC------ 876

Query: 632 RHCTSLKTL 640
            + TSL+TL
Sbjct: 877 -NLTSLRTL 884


>gi|356561802|ref|XP_003549167.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 196/527 (37%), Positives = 299/527 (56%), Gaps = 66/527 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+ F  +L  AL    I TFID++ L RG+EI P+L  AI+ S+++I+
Sbjct: 9   YDVFLSFRGSDTRYGFTGNLYNALSDRGIHTFIDEEELQRGDEIRPALVEAIKQSRMAIL 68

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP-----SDAGYCPSLGW----- 124
           +FS+ YASS +CL+ELVKI+E     G+++ P+FY VDP         Y  +L       
Sbjct: 69  VFSKNYASSSFCLDELVKIMECVKAKGRLIFPIFYDVDPCHVRHQSGSYGEALAMHEERF 128

Query: 125 -------------MGIFDIPTSESVLIEGN----------------VNDISKKLSDLFPS 155
                        +  + +  +++  + G                 V +IS K++   P 
Sbjct: 129 TSSKENLKENMERLQKWKMALNQAADVSGKHYKLGNEYEHEFIGKIVKEISNKINRT-PL 187

Query: 156 DNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
              D  VG+ES ++ ++S L     T  + VGI+GIGG+GKTT+A A+Y++I+  F+G  
Sbjct: 188 HVADYPVGLESRVQTVKSLLEFESDTGVHIVGIYGIGGMGKTTLARAVYNSIADQFKGLC 247

Query: 215 FMQNIRDESEKVG--------------------GLANIHLNFERRRLSRMKVLIVFYDLT 254
           F+ ++R+ + K G                    G  +  ++  + RL R K+L++  D+ 
Sbjct: 248 FLDDVRENATKHGLIHLQEMLLSEIVGEKDIKIGSVSKGISIIKHRLQRKKILLILDDVD 307

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
            L+Q+   +G  + F  GSRVI+TTRD  LL +H   R    +EV++L+  +SL L   N
Sbjct: 308 KLEQLRATVGGPNWFGSGSRVIVTTRDKHLLASHGVDRK---YEVEDLNEEESLELLCWN 364

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF  +     + ++S+  + YA+G+PLAL+V+GS L G   +EWESA+ + K++P+  IQ
Sbjct: 365 AFKDDKVDPCYKDISSQAVAYASGLPLALEVVGSLLFGKGIKEWESALEQYKKIPNKRIQ 424

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTI 433
            +LKVSY+ L++++Q IFLD AC  KG +   V + L A      K GI  LV KSL+ I
Sbjct: 425 DILKVSYNALEEDQQKIFLDIACCLKGYELAEVEDILCAHYGVCMKYGIGVLVDKSLIKI 484

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            N ++T+H+L++ MG EI RQES K+ GK  RLW  +DI QVL ENT
Sbjct: 485 KNGRVTLHELIEVMGKEIDRQESPKELGKHRRLWFHKDIIQVLAENT 531



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 39/175 (22%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  CS+L+ FPEI     NI  L+LK T ++E P S  NL+RL DL L +
Sbjct: 699 IKLISLEQLDLSSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLRDLVLVD 758

Query: 543 CSGLK--------------------------------SVSSRLCNLKSLRRLNLSGC-LK 569
           C  ++                                 VSS   N+     L LSGC L 
Sbjct: 759 CGNVQLPISIVMLPELAQIFALGCKGLLLPKQDKDEEEVSSMSSNVNC---LCLSGCNLS 815

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            E  P  +    +++ L L+  +F  +P  +K+   L  L L NC+ LQ +  +P
Sbjct: 816 DEYFPMVLAWFSNVKELELSCNNFTFLPECIKECHSLILLNLDNCEHLQEIRGIP 870



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 8/154 (5%)

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS---SIGNLSRLVDLDLTNCSGL 546
           +L  L   G   L + P+IS     + L     E L +   S+G L +L  L    C  L
Sbjct: 634 NLTVLNFDGTECLTQIPDISSLQNLVKLTFECCENLVAIHDSVGFLDKLKILSAFGCGKL 693

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
            S       L SL +L+LS C  LE  PE +G +E++  L L     ++ P S + L++L
Sbjct: 694 MSFPP--IKLISLEQLDLSSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARL 751

Query: 607 SDLRLQNCKRLQ---SLPELPCGSSIHARHCTSL 637
            DL L +C  +Q   S+  LP  + I A  C  L
Sbjct: 752 RDLVLVDCGNVQLPISIVMLPELAQIFALGCKGL 785


>gi|227438159|gb|ACP30569.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1173

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 241/751 (32%), Positives = 365/751 (48%), Gaps = 136/751 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H+VF SF G+DVR + ++H+      + I  FIDDK+ RG  I P L  AI+GS+I++V+
Sbjct: 35  HNVFPSFHGEDVRTSLLTHILKEFKSKAIYPFIDDKMKRGKIIGPELKKAIQGSRIAVVL 94

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------- 115
            S+ YASS WCL+EL +I++ + +  Q+V+P+ Y V+PSD                    
Sbjct: 95  LSKNYASSSWCLDELAEIMKCQEELDQMVIPILYEVNPSDVKKQRGDFGKVFKKTCEGKT 154

Query: 116 -----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                             GY  S+ W         ++ +IE    +I   L +  PS + 
Sbjct: 155 NEVIEKWSQALSKVATITGY-HSINW-------NDDAKMIEDITTEILDTLINSTPSRDF 206

Query: 159 DQLVGVESIIKEIESQLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISS---HFEGSY 214
           D LVG+ + +++IE  L      E   +GIWG  GIGKTTIA  ++  +SS   +F+ + 
Sbjct: 207 DGLVGMGAHMEKIEPLLRPDLKEEVRMIGIWGPPGIGKTTIARFLFHQLSSNNDNFQHTV 266

Query: 215 FMQNIR-----------DESEKV----GGLANI--------HLNFERRRLSRMKVLIVFY 251
           F++N++           D + K+      L+ I        HL   +  L   KVL+V  
Sbjct: 267 FVENVKAMYTTIPVSSDDYNAKLHLQQSFLSKIIKKDIEIPHLGVAQDTLKDKKVLVVLD 326

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+    Q+D +      F  GSR+I TT+D  LLK H    +  ++EV   S +++L +F
Sbjct: 327 DVNRSVQLDAMAEETGWFGNGSRIIFTTQDRHLLKAH---GINDLYEVGSPSTDEALQIF 383

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
              AF Q  P AGF +LS  V K A  +PL L+V+GS L+G+S+EEW++ +  L+   H 
Sbjct: 384 CTYAFRQKSPKAGFEDLSREVTKLAGDLPLGLKVMGSCLRGLSKEEWKNKLPSLRNNLHG 443

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           DI+  LK SYD L  E++N+FL  ACFF      +V + L     + + GI  L  KSL+
Sbjct: 444 DIESALKFSYDALRREDKNLFLHIACFFNHEKIEIVEHILARAFLNVRQGIHVLTEKSLI 503

Query: 432 TISNNKITMHDLLQEMGGEIVRQES-----IKDPGKRSRLWHPEDIYQVLNEN---TSLP 483
           + ++  + MHDLL ++G EIVR  S      ++PG+R  L    DI +VL+++   TS  
Sbjct: 504 STNSEYVVMHDLLAQLGREIVRNVSTSEHLTREPGQRQFLVDARDICEVLSDDTAGTSSV 563

Query: 484 TGINLD-------------------SLKELYLGGCSNLKRFPE----ISCNIEDLDLKET 520
            GINL                    +L+ L +G   N   FP+    IS  I  L+  + 
Sbjct: 564 IGINLKLSKAEERLHTSESAFERMTNLQFLRIGSGYNGLYFPQSLNSISRKIRLLEWNDF 623

Query: 521 AIEELPSSI------------GNLSRLVD----------LDLTNCSGLKSVSSRLCNLKS 558
            +  LPS+               L +L D          +DL +   LK +   L    +
Sbjct: 624 PMTCLPSNFSPQFLVKLCMQGSKLKKLWDGIQPLRNLKWMDLRSSKNLKKIPD-LSTATN 682

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           L  L L GC  LE LP  IGN  +L  L+L++      +PSS+     L    L++C  L
Sbjct: 683 LTYLCLRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDCSSL 742

Query: 618 QSLPELPCGSSIHARH-----CTSLKTLSNS 643
             LP L  G++I+ +      C+SLK L +S
Sbjct: 743 VELP-LSIGNAINLKSLNLGGCSSLKDLPSS 772



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 92/183 (50%), Gaps = 35/183 (19%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LP  IN+ SL+EL L GCS+LK+FPEIS NI+ L L  T+IEE+PSSI +          
Sbjct: 865  LPININMVSLRELDLTGCSSLKKFPEISTNIKHLHLIGTSIEEVPSSIKSXXH------- 917

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                             L  L +S    L+K P       ++  L++ + +   I S +K
Sbjct: 918  -----------------LEHLRMSYSQNLKKSPHAX---XTITELHITDTEXLDIGSWVK 957

Query: 602  QLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
            +LS L  L L  CK L SLP+LP GS   + A +C SL+ L +S   L  ++     F F
Sbjct: 958  ELSHLGRLVLYGCKNLVSLPQLP-GSLLDLDASNCESLERLDSSLHNLNSTT-----FRF 1011

Query: 660  SNC 662
             NC
Sbjct: 1012 INC 1014



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 85/171 (49%), Gaps = 17/171 (9%)

Query: 469 PEDIYQVLNENT----------SLPTGI-NLDSLKELYLGGCSNLKRFPEI---SCNIED 514
           P  I+  +N  T           LP  I N  +LK L LGGCS+LK  P     + N+++
Sbjct: 722 PSSIWNAINLQTFDLKDCSSLVELPLSIGNAINLKSLNLGGCSSLKDLPSSIGNAPNLQN 781

Query: 515 LDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           L L   +++  LPSSI N   L  LDL  CS L  +   + N  +LR L+LSGC  L +L
Sbjct: 782 LYLDYCSSLVNLPSSIENAINLQVLDLKYCSSLVELPIFIGNATNLRYLDLSGCSSLVEL 841

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           P  +G L  L  L +      + +P ++  +S L +L L  C  L+  PE+
Sbjct: 842 PSSVGKLHKLPKLTMVGCSKLKVLPININMVS-LRELDLTGCSSLKKFPEI 891



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 85/164 (51%), Gaps = 11/164 (6%)

Query: 490 SLKELYLGGCSNLKRFPEI---SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           +L  L L GCS+L+  P     + N+ +LDL + T +  LPSSI N   L   DL +CS 
Sbjct: 682 NLTYLCLRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINLQTFDLKDCSS 741

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLS 604
           L  +   + N  +L+ LNL GC  L+ LP  IGN  +L+ L L        +PSS++   
Sbjct: 742 LVELPLSIGNAINLKSLNLGGCSSLKDLPSSIGNAPNLQNLYLDYCSSLVNLPSSIENAI 801

Query: 605 KLSDLRLQNCKRLQSLPELPCGSSIHARH-----CTSLKTLSNS 643
            L  L L+ C  L  LP +  G++ + R+     C+SL  L +S
Sbjct: 802 NLQVLDLKYCSSLVELP-IFIGNATNLRYLDLSGCSSLVELPSS 844


>gi|295083305|gb|ADF78106.1| rj2 protein [Glycine max]
          Length = 1052

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 363/740 (49%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 117 --GYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTKVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNN------KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +      ++TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPRVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGLWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSFCYSLESFPKI 722



 Score = 42.7 bits (99), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 38/199 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI +L L  ++I EL  S  NL+ L  LDL+ 
Sbjct: 700 IKLTSLEKLNLSFCYSLESFPKILGKMENIRELCLSNSSITELSFSFQNLAGLQALDLSF 759

Query: 543 CS--GLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLES------------- 582
            S   +  V S +  +  L  + + G      LK E+  E+ G++ S             
Sbjct: 760 LSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L + +CK L+ +  +P    
Sbjct: 820 SDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLSNSSTL 646
              A +C SL + S S  L
Sbjct: 880 HFFAINCKSLTSSSISKFL 898


>gi|295083321|gb|ADF78114.1| rj2 protein [Glycine max]
          Length = 1052

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 363/740 (49%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 116 -AGYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTKVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNN------KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +      ++TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPRVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGLWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSFCYSLESFPKI 722



 Score = 45.8 bits (107), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 38/194 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLF 759

Query: 543 CSG---LKSVSS--RLCNLKSLRRLNLSG--CLKLEKLPEEIGNLES------------- 582
            S     K  SS   +  L  +R L L G   LK E+  E+ G++ S             
Sbjct: 760 LSPHTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEMLTVSSCNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L +  CK L+ +  +P    
Sbjct: 820 CDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRKLDVCGCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLS 641
              A +C SL + S
Sbjct: 880 HFFAINCKSLTSSS 893


>gi|308171398|gb|ADO15993.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171402|gb|ADO15995.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171404|gb|ADO15996.1| Rj2/Rfg1 protein [Glycine max]
 gi|308171406|gb|ADO15997.1| Rj2/Rfg1 protein [Glycine max]
          Length = 1052

 Score =  304 bits (779), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 363/740 (49%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 116 -AGYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTKVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNN------KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +      ++TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPRVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGLWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSFCYSLESFPKI 722



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 38/194 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLF 759

Query: 543 CSG---LKSVSS--RLCNLKSLRRLNLSG--CLKLEKLPEEIGNLES------------- 582
            S     K  SS   +  L  +R L L G   LK E+  E+ G++ S             
Sbjct: 760 LSPHTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEMLTVSSCNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L++ +F  +P  +K+   L  L +  CK L+ +  +P    
Sbjct: 820 CDEFFSIDFTWFAHMKELCLSKNNFTILPECIKECQFLRKLDVCGCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLS 641
              A +C SL + S
Sbjct: 880 HFFAINCKSLTSSS 893


>gi|357499337|ref|XP_003619957.1| Resistance-gene protein [Medicago truncatula]
 gi|355494972|gb|AES76175.1| Resistance-gene protein [Medicago truncatula]
          Length = 1118

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 233/701 (33%), Positives = 352/701 (50%), Gaps = 102/701 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D R+ F  +L  AL  + I TFIDD  L RG+EI+PSL  AIE S+I I 
Sbjct: 18  YQVFLSFRGTDTRYGFTGNLYKALIDKGIHTFIDDNDLQRGDEITPSLIKAIEESRIFIP 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FS  YASS++CL+ELV I+      G++V+P+F+ VDP++       Y  +L       
Sbjct: 78  VFSINYASSKFCLDELVHIIHCYKTKGRLVLPIFFGVDPTNVRHHTCSYGEALAEHEKRF 137

Query: 124 ------------WM----------GIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                       W           G  D P   E  LI   V  IS K++   P    + 
Sbjct: 138 QNDKDNMERLERWKVALSQAANLSGYHDSPPRYEYKLIGEIVKYISNKINRQ-PLHVANY 196

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            VG+ S ++E++S L  G  +  + VGI+GIGG+GK+ +A AIY+ ++  FEG  F+ ++
Sbjct: 197 PVGLHSRVQEVKSLLDEGPDDGVHMVGIYGIGGLGKSALARAIYNFVADQFEGLCFLHDV 256

Query: 220 RDESE-------------KVGGLANIHLNFE-------RRRLSRMKVLIVFYDLTDLKQI 259
           R+ S              K  GL  I L+         + RL R K+L++  D+ D++Q+
Sbjct: 257 RENSAQNNLKHLQEKLLLKTTGL-KIKLDHVCEGIPIIKERLCRNKILLILDDVDDMEQL 315

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             L G  D F  GSRVIITTRD  LL +H   R    + V+ L   ++L L    AF  N
Sbjct: 316 HALAGGPDWFGHGSRVIITTRDKHLLTSHDIERT---YAVEGLYGTEALELLRWMAFKNN 372

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
              + + ++ N  + YA+G+PL L+++GS L G S +EW+  ++  +++P+  I ++LKV
Sbjct: 373 KVPSSYEDILNRAVSYASGLPLVLEIVGSNLFGKSIKEWKGTLDGYEKIPNKKIHEILKV 432

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAKIGISRLVGKSLVTISN 435
           SYD L++E+Q++FLD AC FKG       + L      C  +  +G+  L  KSL+ IS 
Sbjct: 433 SYDALEEEQQSVFLDIACCFKGCGWEEFEDILHVHYGHC-ITHHLGV--LAEKSLIKIST 489

Query: 436 -------NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----T 484
                  + + +HDL+++MG E+VRQES KDP KRSRLW  EDI  V+ EN         
Sbjct: 490 CYHSGSIDVVRVHDLIKDMGKEVVRQESPKDPEKRSRLWRHEDIVHVIKENIGTSKIEMI 549

Query: 485 GINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI--------------- 529
            +N  S++ +        K+  ++   I +       ++ LPSS+               
Sbjct: 550 NMNFHSMESVIDQKGKAFKKMTKLRTLIIENGHFSEGLKYLPSSLIVLKWKGCLSESLSS 609

Query: 530 ----GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
                N   +  L L +   L  +   L  L++L + +   C  L  +   IG+L  LE 
Sbjct: 610 SILSKNFQNMKVLTLDDNEYLTHIPD-LSGLQNLEKFSFKYCENLITIDNSIGHLNKLER 668

Query: 586 LN-LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           L+       E+ P     L+ L +L L  C  L+S P+L C
Sbjct: 669 LSAFGCSKLERFPPL--GLASLKELNLCCCDSLKSFPKLLC 707



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 11/146 (7%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SLKEL L  C +LK FP++ C + ++D   L  T I EL SS  NLS L +L +  
Sbjct: 683 LGLASLKELNLCCCDSLKSFPKLLCEMTNIDCIWLNYTPIGELLSSFQNLSELDELSVRE 742

Query: 543 CSGL--KSVSSRLCNLK--SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           C  L  K  S    N+   SL+  NLS     E L   +    ++E L L+  +F+ +P 
Sbjct: 743 CGMLNDKMYSIMFSNVTELSLKDCNLSD----EYLQIVLKWCVNVEELELSNNNFKILPE 798

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELP 624
            + +   L  L L  C  L+ +  +P
Sbjct: 799 CLSECHHLKHLDLSYCTSLEEIRGIP 824


>gi|215261576|gb|ACJ64856.1| disease resistance protein RPP1-like protein R2 [Arabidopsis
           thaliana]
          Length = 1162

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 237/699 (33%), Positives = 350/699 (50%), Gaps = 107/699 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 93  KHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKKAIKGSKIAIV 152

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           + S  YASS WCL+EL +I++ +   GQIV+ +FY VDP+D               C   
Sbjct: 153 LLSRKYASSSWCLDELTEIMKCREVLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGK 212

Query: 123 G------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE     +S  L+   PS + D LVG+ 
Sbjct: 213 TKEYVERWRKALEDVATIAGYHSHSWRNEADMIEKIATYVSNMLNSFTPSRDFDGLVGMR 272

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  + + +S  F+ S  M NI+     
Sbjct: 273 AHMDMLEQLLRHDLDEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPR 332

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 333 LCLDERSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 392

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++V   S +++  +F  NAFGQ  P  
Sbjct: 393 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVGYPSNDEAFQIFCMNAFGQKQPHE 449

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V+  A  +PL L+VLGS L+G S+ EWE  + +LK     +I  +++ SYD 
Sbjct: 450 GFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDA 509

Query: 384 LDDEEQNIFLDTACFFKGNDQY------LVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           L DE++ +FL  AC F  ND+       L+  FLD     A+ G+  L  KSL++    +
Sbjct: 510 LCDEDKYLFLYIACLF--NDESTTKVKELLGKFLD-----ARQGLHILAQKSLISFDGER 562

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENTSLP---TGINLDSLK- 492
           I MH LL++ G E  R++ +     + +L   E DI +VLN++T+      GINLD  K 
Sbjct: 563 IHMHTLLEQFGRETSRKQFVYHGYTKHQLLVGERDICEVLNDDTTDSRRFIGINLDLYKN 622

Query: 493 --ELYLGGCSNLKRF---------------PE-ISCNIEDLDLKETAIEE---------- 524
             EL +     L+R                PE +   +EDL  +   I            
Sbjct: 623 EEELNISE-KALERIHDFQFVKINDVFTHQPERVQLALEDLIYQSPRIRSLKWFPYQNIC 681

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--EEIGNLES 582
           LPS+  N   LV+LD+++ S L+ +      L++L+ ++LS    L++LP      NLE 
Sbjct: 682 LPSTF-NPEFLVELDMSD-SNLRKLWEGTKQLRNLKWMDLSDSSYLKELPNLSTATNLEE 739

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L+  N +     ++PSS+++L+ L  L L +C  L  LP
Sbjct: 740 LKLRNCS--SLVELPSSIEKLTSLQILDLHSCSSLVELP 776



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 8/171 (4%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKETA-IEELPSSIGNLSRLVDL 538
           LP+  N   LK+L LG CS+L + P    + N+++L L+  + + +LP+ I N ++L +L
Sbjct: 775 LPSFGNTTKLKKLDLGKCSSLVKLPPSINANNLQELSLRNCSRVVKLPA-IENATKLREL 833

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
            L NCS L  +   +    +L++LN+SGC  L KLP  IG++ +LE  +L        +P
Sbjct: 834 KLRNCSSLIELPLSIGTATNLKKLNISGCSSLVKLPSSIGDMTNLEVFDLDNCSSLVTLP 893

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           SS+  L KLS+L +  C +L++LP    L    ++    CT LK+    ST
Sbjct: 894 SSIGNLQKLSELLMSECSKLEALPTNINLKSLYTLDLTDCTQLKSFPEIST 944



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 27/143 (18%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LPT INL SL  L L  C+ LK FPEIS +I +L LK TAI+E+P SI + SRL   ++
Sbjct: 915  ALPTNINLKSLYTLDLTDCTQLKSFPEISTHISELRLKGTAIKEVPLSITSWSRLAVYEM 974

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +                             E L E    L+ +  L L  +D +++P  +
Sbjct: 975  S---------------------------YFESLKEFPHALDIITDLLLVSEDIQEVPPWV 1007

Query: 601  KQLSKLSDLRLQNCKRLQSLPEL 623
            K++S+L DLRL NC  L SLP+L
Sbjct: 1008 KRMSRLRDLRLNNCNNLVSLPQL 1030



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 23/215 (10%)

Query: 458 KDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL-- 515
           + P  RS  W P   YQ    N  LP+  N + L EL +   SNL++  E +  + +L  
Sbjct: 665 QSPRIRSLKWFP---YQ----NICLPSTFNPEFLVELDMSD-SNLRKLWEGTKQLRNLKW 716

Query: 516 -DLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            DL +++ ++ELP+ +   + L +L L NCS L  + S +  L SL+ L+L  C  L +L
Sbjct: 717 MDLSDSSYLKELPN-LSTATNLEELKLRNCSSLVELPSSIEKLTSLQILDLHSCSSLVEL 775

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA- 631
           P   GN   L+ L+L +     K+P S+   + L +L L+NC R+  LP +   + +   
Sbjct: 776 P-SFGNTTKLKKLDLGKCSSLVKLPPSINA-NNLQELSLRNCSRVVKLPAIENATKLREL 833

Query: 632 --RHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
             R+C+SL  L  S    T   K     N S CS+
Sbjct: 834 KLRNCSSLIELPLSIGTATNLKK----LNISGCSS 864


>gi|297805928|ref|XP_002870848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316684|gb|EFH47107.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 983

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 232/707 (32%), Positives = 344/707 (48%), Gaps = 106/707 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F++H+      + I  FID+ + R   I P L  AI+GSKI+IV
Sbjct: 62  KHDVFPSFHGADVRKTFLAHILKEFKGKGIVPFIDNDIERSKSIGPELIEAIKGSKIAIV 121

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------YCPSL 122
           + S  YASS WCLNELV+I+  + + GQ V+ +FY VDP+D               C   
Sbjct: 122 LLSRNYASSSWCLNELVEIMNCREELGQTVMTIFYDVDPTDVKKQTGDFGKVFKKTCKGK 181

Query: 123 G------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W  + +   +           E+ + +    D+S  L+   PS + D  +G+ 
Sbjct: 182 TKEDIKRWQNVLEAVATIAGEHSRNWDNEAAMTKKIATDVSNMLNRYSPSRDFDGFIGMG 241

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD---- 221
           + + E+ES L   S E   +GIWG  GIGKTTIA  +YS  S  FE S FM+NI++    
Sbjct: 242 AHMNEMESLLCLDSDEVRMIGIWGPSGIGKTTIARVLYSQFSESFELSIFMENIKELMYT 301

Query: 222 --------------ESEKVGGLAN------IHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                         + + +  + N       HL   + RL+  +VLIV   +    Q+D 
Sbjct: 302 RPVCSDEYSAKIQLQQQFLSQIINHKDMELPHLGVAQDRLNDKRVLIVLDSIDQSIQLDA 361

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           +      F  GSR+IITT+D +LLK H    + H+++V+  S  ++  +F   AFGQN P
Sbjct: 362 IAKETRWFGHGSRIIITTQDQRLLKAH---GINHIYKVEFPSAYEAYQIFCMYAFGQNFP 418

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF EL+  V K    +PL L+V+GS+ +GM   EW +A+ +LK      IQ +LK SY
Sbjct: 419 KDGFEELAWQVTKLLGNLPLGLRVMGSHFRGMPRHEWVNALPRLKIRLDASIQSILKFSY 478

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-----SNN 436
           D L DE++++FL  AC F   +   V ++L       + G+  L  KSL+ I     ++ 
Sbjct: 479 DALCDEDKDLFLHIACLFNNEEMVKVEDYLALSFLDVRQGLHLLAEKSLIAIEILSTNHT 538

Query: 437 KITMHDLLQEMGGEIVR----QESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD- 489
            I +H+LL ++G +IVR     + I++PGKR  L    DI +VL +NT      GI L+ 
Sbjct: 539 SIKVHNLLVQLGRDIVRHKPGHQCIREPGKRQFLVDARDICEVLTDNTGSRNVIGILLEV 598

Query: 490 -------SLKELYLGGCSNLK--RFP----------EISCNIEDLDLKETAIEE------ 524
                  ++ E    G SN K  RF            +   + +L  K   IE       
Sbjct: 599 ENLSGQLNISERGFEGMSNHKFLRFHGPYEGENDKLYLPQGLNNLPRKLRIIEWFRFPMK 658

Query: 525 -LPSSIGNLSRLVDLDLTNCS-------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE- 575
            LPS+      LV L + N           +S  S L  L +L+R++L     L++LP+ 
Sbjct: 659 CLPSNFCT-KYLVQLHMWNSKLQNMWQGNQESRRSDLPPLGNLKRMDLRESKHLKELPDL 717

Query: 576 -EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
               NLE L     +     ++PSS+  L KL  L L+ C +L++LP
Sbjct: 718 STATNLEELILYGCS--SLPELPSSIGSLQKLQVLLLRGCSKLEALP 762



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 28/164 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT INL+SL  L L  C  +K FPEIS NI+ L+L +TA++E+PS+I + S       
Sbjct: 760 ALPTNINLESLDYLDLADCLLIKSFPEISTNIKRLNLMKTAVKEVPSTIKSWS------- 812

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
                             LR+L +S    L++ P  +  +  L Y N  +   ++IP  +
Sbjct: 813 -----------------PLRKLEMSYNDNLKEFPHALDIITKL-YFN--DTKIQEIPLWV 852

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           +++S+L  L L+ CKRL ++P+L    S + A +C SL+ L  S
Sbjct: 853 QKISRLQTLVLEGCKRLVTIPQLSDSLSKVAAINCQSLERLDFS 896


>gi|30683870|ref|NP_193428.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658426|gb|AEE83826.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1449

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 243/679 (35%), Positives = 352/679 (51%), Gaps = 78/679 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA+SSSS       ++DVF SF G DVR  F+SHL  AL  + I TFID  + R   I+P
Sbjct: 1   MAASSSS----GRRRYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L SAI  ++ISIVIFS+ YASS WCLNELV+I +  N  GQ+V+PVFY VDPS+     
Sbjct: 57  ELISAIREARISIVIFSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQT 116

Query: 117 -------------------GYCPSLGWMGIFDIPT----------SESVLIEGNVNDISK 147
                              G         + DI            +E+ ++E   ND+S 
Sbjct: 117 GEFGKVFEKTCEVSKDKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSN 176

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           KL  +  S   D  VG+E+ I+ I+S L   S E   VGIWG  GIGK+TI  A++S +S
Sbjct: 177 KL--ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLS 234

Query: 208 SHFEGSYFMQNIRDESEKVGG---------LANI---------HLNFERRRLSRMKVLIV 249
             F    F+         V G         L+ I         H     +RL   KVLI+
Sbjct: 235 IQFPLRAFLTYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLIL 294

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ +L+ +  L+G+ + F  GSR+I+ T+D Q LK H    +  V+EVK  S   +LT
Sbjct: 295 LDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQFLKAHD---IDLVYEVKLPSQGLALT 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +  R+AFG++ P   F EL+  V K A  +PL L VLGS L+   ++EW   + +L+   
Sbjct: 352 MLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGL 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           + DI K L+VSYD L  ++Q++FL  AC F G +   V + L+       +G++ L  KS
Sbjct: 412 NGDIMKTLRVSYDRLHQKDQDMFLCIACLFNGFEVSYVKDLLE-----DNVGLTMLSEKS 466

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINL 488
           L+ I+ +  I MH+LL+++G EI R +S  +PGKR  L + EDI++V+ E T   T + +
Sbjct: 467 LIRITPDGHIEMHNLLEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGI 526

Query: 489 DSLKELYLGGCSNL---KRFPEISCNIEDLDLKETAIEELPSSIGNLS-RLVDLDLTNCS 544
               E Y      L   + F  +  N++ L + + +    P S+  L  +L  LD  +C 
Sbjct: 527 RLPFEEYFSTRPLLIDKESFKGMR-NLQYLKIGDWSDGGQPQSLVYLPLKLRLLDWDDCP 585

Query: 545 GLKSVSSRLCNLKSLRRLNL-SGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQ 602
            LKS+ S     K+   +NL     KLEKL E    L SL+ +N L  K+ ++IP  +  
Sbjct: 586 -LKSLPS---TFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIP-DLSN 640

Query: 603 LSKLSDLRLQNCKRLQSLP 621
              L +L L+ C+ L +LP
Sbjct: 641 ARNLEELDLEGCESLVTLP 659



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 27/162 (16%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE----------------- 524
            LPT +NL SL+ L L GCS+L+ FP IS +I+ L L+ TAIEE                 
Sbjct: 979  LPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKATKLESLILNN 1038

Query: 525  ------LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
                  LPS+IGNL  L  L +  C+GL+ + + + NL SL  L+LSGC  L   P    
Sbjct: 1039 CKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLSSLGILDLSGCSSLRTFPLIST 1097

Query: 579  NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
            N   + +L L      ++P  ++  ++L  L +  C+RL+++
Sbjct: 1098 N---IVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNI 1136



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 52/86 (60%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS NI  L L+ TAI E+P  I + +RL  L + 
Sbjct: 1069 LPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEVPCCIEDFTRLRVLLMY 1128

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L+SL   + + C
Sbjct: 1129 CCQRLKNISPNIFRLRSLMFADFTDC 1154



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 83/174 (47%), Gaps = 14/174 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
           S PT +NL+SL+ L L GC NL+ FP I     D+D  E   E  +     N +    LD
Sbjct: 818 SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLD 877

Query: 540 LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             +C     +    C  +   L  LN+  C K EKL E I +L SLE ++L+E ++  +I
Sbjct: 878 YLDC----LMRCMPCEFRPEYLVFLNVR-CYKHEKLWEGIQSLGSLEEMDLSESENLTEI 932

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTL 646
           P  + + + L  L L NCK L +LP     L     +  + CT L+ L     L
Sbjct: 933 P-DLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNL 985



 Score = 46.2 bits (108), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 22/102 (21%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L  LK+++L G   LK  P++S  I                      L ++D+  C  L 
Sbjct: 755 LGRLKQMFLRGSKYLKEIPDLSLAI---------------------NLEEVDICKCESLV 793

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           +  S + N   L  L++S C KLE  P ++ NLESLEYLNL 
Sbjct: 794 TFPSSMQNAIKLIYLDISDCKKLESFPTDL-NLESLEYLNLT 834



 Score = 42.7 bits (99), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 39/193 (20%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVD 537
           +LP G    SLK++ L    NLK  P++S   N+E+LDL+   ++  LPSSI N  +L  
Sbjct: 615 TLPLG----SLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSSIQNAIKLRK 670

Query: 538 LDLTNCSG-----LKSVSSRLCNLKSLR-------------------RLNLSGCLKLEKL 573
           L   +CSG     LKS+   +CNL+ L                    RL L     L++L
Sbjct: 671 L---HCSGVILIDLKSLEG-MCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRL 726

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG---SSIH 630
                 +E L  L +   D EK+    + L +L  + L+  K L+ +P+L        + 
Sbjct: 727 HSNF-KVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVD 785

Query: 631 ARHCTSLKTLSNS 643
              C SL T  +S
Sbjct: 786 ICKCESLVTFPSS 798


>gi|5302807|emb|CAB46048.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268446|emb|CAB80966.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1317

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 244/679 (35%), Positives = 354/679 (52%), Gaps = 78/679 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA+SSSS       ++DVF SF G DVR  F+SHL  AL  + I TFID  + R   I+P
Sbjct: 1   MAASSSS----GRRRYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L SAI  ++ISIVIFS+ YASS WCLNELV+I +  N  GQ+V+PVFY VDPS+     
Sbjct: 57  ELISAIREARISIVIFSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQT 116

Query: 117 --------GYCP----------SLGWM-GIFDIPT----------SESVLIEGNVNDISK 147
                     C              W+  + DI            +E+ ++E   ND+S 
Sbjct: 117 GEFGKVFEKTCEVSKDKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSN 176

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           KL  +  S   D  VG+E+ I+ I+S L   S E   VGIWG  GIGK+TI  A++S +S
Sbjct: 177 KL--ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLS 234

Query: 208 SHFEGSYFMQNIRDESEKVGG---------LANI---------HLNFERRRLSRMKVLIV 249
             F    F+         V G         L+ I         H     +RL   KVLI+
Sbjct: 235 IQFPLRAFLTYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLIL 294

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ +L+ +  L+G+ + F  GSR+I+ T+D Q LK H    +  V+EVK  S   +LT
Sbjct: 295 LDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQFLKAHD---IDLVYEVKLPSQGLALT 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +  R+AFG++ P   F EL+  V K A  +PL L VLGS L+   ++EW   + +L+   
Sbjct: 352 MLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGL 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           + DI K L+VSYD L  ++Q++FL  AC F G +   V + L+       +G++ L  KS
Sbjct: 412 NGDIMKTLRVSYDRLHQKDQDMFLCIACLFNGFEVSYVKDLLE-----DNVGLTMLSEKS 466

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINL 488
           L+ I+ +  I MH+LL+++G EI R +S  +PGKR  L + EDI++V+ E T   T + +
Sbjct: 467 LIRITPDGHIEMHNLLEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGI 526

Query: 489 DSLKELYLGGCSNL---KRFPEISCNIEDLDLKETAIEELPSSIGNLS-RLVDLDLTNCS 544
               E Y      L   + F  +  N++ L + + +    P S+  L  +L  LD  +C 
Sbjct: 527 RLPFEEYFSTRPLLIDKESFKGMR-NLQYLKIGDWSDGGQPQSLVYLPLKLRLLDWDDCP 585

Query: 545 GLKSVSSRLCNLKSLRRLNL-SGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQ 602
            LKS+ S     K+   +NL     KLEKL E    L SL+ +N L  K+ ++IP  +  
Sbjct: 586 -LKSLPS---TFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIP-DLSN 640

Query: 603 LSKLSDLRLQNCKRLQSLP 621
              L +L L+ C+ L +LP
Sbjct: 641 ARNLEELDLEGCESLVTLP 659



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 87/160 (54%), Gaps = 23/160 (14%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL+ L L GCS+L+ FP IS +I+ L L+ TAIEE+   +   ++L  L L 
Sbjct: 979  LPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEI-LDLSKATKLESLILN 1037

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA------------ 589
            NC  L ++ S + NL++LRRL +  C  LE LP ++ NL SL  L+L+            
Sbjct: 1038 NCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLSSLGILDLSGCSSLRTFPLIS 1096

Query: 590  ---------EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                          ++P  ++  ++L  L +  C+RL+++
Sbjct: 1097 TNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNI 1136



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 52/86 (60%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS NI  L L+ TAI E+P  I + +RL  L + 
Sbjct: 1069 LPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEVPCCIEDFTRLRVLLMY 1128

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L+SL   + + C
Sbjct: 1129 CCQRLKNISPNIFRLRSLMFADFTDC 1154



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 19/192 (9%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
           S PT +NL+SL+ L L GC NL+ FP I     D+D  E   E  +     N +    LD
Sbjct: 818 SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLD 877

Query: 540 LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             +C     +    C  +   L  LN+  C K EKL E I +L SLE ++L+E ++  +I
Sbjct: 878 YLDC----LMRCMPCEFRPEYLVFLNVR-CYKHEKLWEGIQSLGSLEEMDLSESENLTEI 932

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
           P  + + + L  L L NCK L +LP     L     +  + CT L+ L     L      
Sbjct: 933 P-DLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNL-----S 986

Query: 653 HWDIFNFSNCSN 664
             +  + S CS+
Sbjct: 987 SLETLDLSGCSS 998



 Score = 45.8 bits (107), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 22/102 (21%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L  LK+++L G   LK  P++S  I                      L ++D+  C  L 
Sbjct: 755 LGRLKQMFLRGSKYLKEIPDLSLAI---------------------NLEEVDICKCESLV 793

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           +  S + N   L  L++S C KLE  P ++ NLESLEYLNL 
Sbjct: 794 TFPSSMQNAIKLIYLDISDCKKLESFPTDL-NLESLEYLNLT 834



 Score = 42.4 bits (98), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 39/193 (20%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVD 537
           +LP G    SLK++ L    NLK  P++S   N+E+LDL+   ++  LPSSI N  +L  
Sbjct: 615 TLPLG----SLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSSIQNAIKLRK 670

Query: 538 LDLTNCSG-----LKSVSSRLCNLKSLR-------------------RLNLSGCLKLEKL 573
           L   +CSG     LKS+   +CNL+ L                    RL L     L++L
Sbjct: 671 L---HCSGVILIDLKSLEG-MCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRL 726

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG---SSIH 630
                 +E L  L +   D EK+    + L +L  + L+  K L+ +P+L        + 
Sbjct: 727 HSNF-KVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVD 785

Query: 631 ARHCTSLKTLSNS 643
              C SL T  +S
Sbjct: 786 ICKCESLVTFPSS 798


>gi|30683875|ref|NP_849398.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658427|gb|AEE83827.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1404

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 243/679 (35%), Positives = 352/679 (51%), Gaps = 78/679 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA+SSSS       ++DVF SF G DVR  F+SHL  AL  + I TFID  + R   I+P
Sbjct: 1   MAASSSS----GRRRYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L SAI  ++ISIVIFS+ YASS WCLNELV+I +  N  GQ+V+PVFY VDPS+     
Sbjct: 57  ELISAIREARISIVIFSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQT 116

Query: 117 -------------------GYCPSLGWMGIFDIPT----------SESVLIEGNVNDISK 147
                              G         + DI            +E+ ++E   ND+S 
Sbjct: 117 GEFGKVFEKTCEVSKDKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSN 176

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           KL  +  S   D  VG+E+ I+ I+S L   S E   VGIWG  GIGK+TI  A++S +S
Sbjct: 177 KL--ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLS 234

Query: 208 SHFEGSYFMQNIRDESEKVGG---------LANI---------HLNFERRRLSRMKVLIV 249
             F    F+         V G         L+ I         H     +RL   KVLI+
Sbjct: 235 IQFPLRAFLTYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLIL 294

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ +L+ +  L+G+ + F  GSR+I+ T+D Q LK H    +  V+EVK  S   +LT
Sbjct: 295 LDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQFLKAHD---IDLVYEVKLPSQGLALT 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +  R+AFG++ P   F EL+  V K A  +PL L VLGS L+   ++EW   + +L+   
Sbjct: 352 MLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGL 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           + DI K L+VSYD L  ++Q++FL  AC F G +   V + L+       +G++ L  KS
Sbjct: 412 NGDIMKTLRVSYDRLHQKDQDMFLCIACLFNGFEVSYVKDLLE-----DNVGLTMLSEKS 466

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINL 488
           L+ I+ +  I MH+LL+++G EI R +S  +PGKR  L + EDI++V+ E T   T + +
Sbjct: 467 LIRITPDGHIEMHNLLEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVTEKTGTETLLGI 526

Query: 489 DSLKELYLGGCSNL---KRFPEISCNIEDLDLKETAIEELPSSIGNLS-RLVDLDLTNCS 544
               E Y      L   + F  +  N++ L + + +    P S+  L  +L  LD  +C 
Sbjct: 527 RLPFEEYFSTRPLLIDKESFKGMR-NLQYLKIGDWSDGGQPQSLVYLPLKLRLLDWDDCP 585

Query: 545 GLKSVSSRLCNLKSLRRLNL-SGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQ 602
            LKS+ S     K+   +NL     KLEKL E    L SL+ +N L  K+ ++IP  +  
Sbjct: 586 -LKSLPS---TFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSKNLKEIP-DLSN 640

Query: 603 LSKLSDLRLQNCKRLQSLP 621
              L +L L+ C+ L +LP
Sbjct: 641 ARNLEELDLEGCESLVTLP 659



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 87/160 (54%), Gaps = 23/160 (14%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL+ L L GCS+L+ FP IS +I+ L L+ TAIEE+   +   ++L  L L 
Sbjct: 979  LPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEI-LDLSKATKLESLILN 1037

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA------------ 589
            NC  L ++ S + NL++LRRL +  C  LE LP ++ NL SL  L+L+            
Sbjct: 1038 NCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLSSLGILDLSGCSSLRTFPLIS 1096

Query: 590  ---------EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                          ++P  ++  ++L  L +  C+RL+++
Sbjct: 1097 TNIVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNI 1136



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 52/86 (60%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS NI  L L+ TAI E+P  I + +RL  L + 
Sbjct: 1069 LPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEVPCCIEDFTRLRVLLMY 1128

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L+SL   + + C
Sbjct: 1129 CCQRLKNISPNIFRLRSLMFADFTDC 1154



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 19/192 (9%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
           S PT +NL+SL+ L L GC NL+ FP I     D+D  E   E  +     N +    LD
Sbjct: 818 SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLD 877

Query: 540 LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             +C     +    C  +   L  LN+  C K EKL E I +L SLE ++L+E ++  +I
Sbjct: 878 YLDC----LMRCMPCEFRPEYLVFLNVR-CYKHEKLWEGIQSLGSLEEMDLSESENLTEI 932

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
           P  + + + L  L L NCK L +LP     L     +  + CT L+ L     L      
Sbjct: 933 P-DLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNL-----S 986

Query: 653 HWDIFNFSNCSN 664
             +  + S CS+
Sbjct: 987 SLETLDLSGCSS 998



 Score = 45.8 bits (107), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 22/102 (21%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L  LK+++L G   LK  P++S  I                      L ++D+  C  L 
Sbjct: 755 LGRLKQMFLRGSKYLKEIPDLSLAI---------------------NLEEVDICKCESLV 793

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           +  S + N   L  L++S C KLE  P ++ NLESLEYLNL 
Sbjct: 794 TFPSSMQNAIKLIYLDISDCKKLESFPTDL-NLESLEYLNLT 834



 Score = 42.4 bits (98), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 39/193 (20%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVD 537
           +LP G    SLK++ L    NLK  P++S   N+E+LDL+   ++  LPSSI N  +L  
Sbjct: 615 TLPLG----SLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSSIQNAIKLRK 670

Query: 538 LDLTNCSG-----LKSVSSRLCNLKSLR-------------------RLNLSGCLKLEKL 573
           L   +CSG     LKS+   +CNL+ L                    RL L     L++L
Sbjct: 671 L---HCSGVILIDLKSLEG-MCNLEYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRL 726

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG---SSIH 630
                 +E L  L +   D EK+    + L +L  + L+  K L+ +P+L        + 
Sbjct: 727 HSNF-KVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVD 785

Query: 631 ARHCTSLKTLSNS 643
              C SL T  +S
Sbjct: 786 ICKCESLVTFPSS 798


>gi|357456965|ref|XP_003598763.1| Resistance protein [Medicago truncatula]
 gi|355487811|gb|AES69014.1| Resistance protein [Medicago truncatula]
          Length = 1184

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 246/706 (34%), Positives = 353/706 (50%), Gaps = 103/706 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREK-IETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           +DVFLSFRG D R+NF  +L  +L  ++ I+TF+DD+ + +G EI+P+L  AI+ S+I I
Sbjct: 18  YDVFLSFRGIDTRNNFTGNLYHSLHHQRGIQTFMDDEEIQKGEEITPTLLQAIKQSRIFI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
            IFS  YASS +CL ELV ILE     G++ +PVFY VDPS        Y  +       
Sbjct: 78  AIFSPNYASSTFCLTELVTILECSMLQGRLFLPVFYDVDPSQIRNLTGTYAEAFAKHEVR 137

Query: 124 -----------WMGIFDIPT------------SESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                      W                    SE   IE  V ++S K++ + P      
Sbjct: 138 FGDEKDSKVQKWRDALRQAANVSGWHFKPGFESEYKFIEKIVEEVSVKINRI-PLHVATN 196

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            VG+ES I E+ S L   S E  N VGI+GIGGIGK+T A A+++ I+  FEG  F+ +I
Sbjct: 197 PVGLESQILEVTSLLGFDSNERVNMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDI 256

Query: 220 RDES------------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQI 259
           R                     EK   + +++  ++  +RRL R KVL++  ++  ++Q+
Sbjct: 257 RKREINHDLAQLQETLLADILGEKDIKVGDVYRGMSIVKRRLQRKKVLLILDNVDKVQQL 316

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
              +G  D F  GS+VI+TTRD  LL  H    +  V+EVK+L    +L LFS +AF   
Sbjct: 317 QAFVGGHDWFGFGSKVIVTTRDKHLLATHG---IVKVYEVKQLKSEKALELFSWHAFKNK 373

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                +++++  ++ Y +G+PLAL+V+GS+L G S   W+S++ K KR+   DI ++LKV
Sbjct: 374 KIDPCYVDIAKRLVSYCHGLPLALEVIGSHLFGKSLGVWKSSLVKYKRVLRKDIHEILKV 433

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKI 438
           SYD L+++E+ IFLD ACFF   +   V   L    F A+ GI  L+ KSL+ I  N  +
Sbjct: 434 SYDDLEEDEKGIFLDIACFFNSYEISYVKELLYLHGFQAEDGIQVLIDKSLMKIDINGCV 493

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT-------------- 484
            MHDL+Q MG EIVR+ES  +PG+RSRLW  +DI +VL EN    T              
Sbjct: 494 RMHDLIQGMGREIVRRESTSEPGRRSRLWFSDDIVRVLEENKGTDTIEVIIADLRKGRKV 553

Query: 485 ---GINLDSLKELYLGGCSN--LKRFPEISCN-IEDLDLKETAIEELPS----------- 527
              G     +K L +    N    R P+I  N +  LD     +  LPS           
Sbjct: 554 KWCGKAFGQMKNLRILIIRNAGFSRGPQILPNSLSVLDWSGYQLSSLPSDFYPKNLVILN 613

Query: 528 ----------SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
                     S+     L  LD   C  L  + S L  + +L  L L  C  L K+ + +
Sbjct: 614 LPESCLKWFESLKVFETLSFLDFEGCKLLTEMPS-LSRVPNLGALCLDYCTNLNKIHDSV 672

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           G LE L  L+       +I      L  L  L L+ C RL+S PE+
Sbjct: 673 GFLERLVLLSAQGCTQLEILVPYINLPSLETLDLRGCSRLESFPEV 718



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 6/157 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            ++L  L   GC  L   P +S   N+  L L   T + ++  S+G L RLV L    C+
Sbjct: 628 FETLSFLDFEGCKLLTEMPSLSRVPNLGALCLDYCTNLNKIHDSVGFLERLVLLSAQGCT 687

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ +   + NL SL  L+L GC +LE  PE +G +E+++ + L +   +++P ++  L 
Sbjct: 688 QLEILVPYI-NLPSLETLDLRGCSRLESFPEVVGVMENIKDVYLDQTALKQLPFTIGNLI 746

Query: 605 KLSDLRLQNCKRLQSLPE--LPCGSSIHARHCTSLKT 639
            L  L L+ C+ +  LP   LP    I +  C   ++
Sbjct: 747 GLRRLFLRGCQGMIMLPSYILPKFEIITSYGCRGFRS 783



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 3/64 (4%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           INL SL+ L L GCS L+ FPE+     NI+D+ L +TA+++LP +IGNL  L  L L  
Sbjct: 696 INLPSLETLDLRGCSRLESFPEVVGVMENIKDVYLDQTALKQLPFTIGNLIGLRRLFLRG 755

Query: 543 CSGL 546
           C G+
Sbjct: 756 CQGM 759


>gi|105922376|gb|ABF81413.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1152

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 231/719 (32%), Positives = 355/719 (49%), Gaps = 146/719 (20%)

Query: 44  IETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQ 102
           I+ ++DD+ L RG  I P+L  AIE S+ S++IFS  YASS WCL+ELVKI++   + GQ
Sbjct: 24  IDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSRDYASSPWCLDELVKIVQCMKEMGQ 83

Query: 103 IVVPVFYLVDPSDA-----------------------------GYCPSLGWMGIFDIPT- 132
            V+PVFY VDPS+                                  ++  +  +DI   
Sbjct: 84  TVLPVFYDVDPSEVIERKRKYEEAFVEHEQNFKENLEQVRNWKDCLSTVANLSGWDIRNR 143

Query: 133 SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGG 192
           +ES  I+     IS KLS   P+ +K +LVG++S ++ +   +     E   +GI G+GG
Sbjct: 144 NESESIKRIAKYISYKLSVTLPTISK-KLVGIDSRVEVLNGFIGEEVGEAIFIGICGMGG 202

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFY- 251
           IGKTTIA  +Y +    F+GS F+ N+RD   + GG   +        L     +   Y 
Sbjct: 203 IGKTTIARVVYDSFRWQFKGSCFLANVRDVFAEKGGPRRLQEQLLSEILMERASVCDSYR 262

Query: 252 -------------------DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
                              D+ D KQ++ L      F PGSR+IIT+RD  +   +  ++
Sbjct: 263 GIEMIKRRLRLKKILLILDDVNDKKQLEFLAAEPGWFGPGSRIIITSRDKNVFTGNDDTK 322

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           +   +E ++L+ +D+L LFS+ AF  + PA  F++LS  V+ YANG+PLAL+V+GS+L G
Sbjct: 323 I---YEAEKLNDDDALMLFSQKAFKNDQPAEDFVKLSKQVVGYANGLPLALEVIGSFLYG 379

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
               EW  A+N++  +P  +I KVL VS+DGL + E+ IFLD ACF KG     +   LD
Sbjct: 380 RRIPEWRGAINRMNEIPDDEIIKVLLVSFDGLHELEKKIFLDIACFLKGFKIDRITRILD 439

Query: 413 ACR-FSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKD------------ 459
             R F   IGI  L+ +SL+++S +++ MH+LLQ+MG EI+R+ES  +            
Sbjct: 440 GWRGFHTGIGIPVLIERSLISVSRDQVWMHNLLQKMGQEIIRRESPDEPGRRSRLWTYED 499

Query: 460 ---------------------PGKRSRLWH-----------------------PEDIYQV 475
                                PG +   W+                       PED+   
Sbjct: 500 VCLALMDNTGKEKIEAIFLDMPGIKEAQWNMKAFSKMSRLRLLKIDNMQLSEGPEDLSNN 559

Query: 476 LN-------ENTSLPTGINLDSLKELYLG---------GCSN--------------LKRF 505
           L         + SLP G+ +D L EL++          GC +              L + 
Sbjct: 560 LRFLEWHSYPSKSLPAGLQVDELVELHMANSNLEQLWYGCKSAVKLKIINLNNSLYLSKT 619

Query: 506 PEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRL 562
           P+++   N+E L L+  T++ E+  S+G   +L  ++L NC  ++ + S L  ++SL+  
Sbjct: 620 PDLTGIPNLESLILEGCTSLSEVHPSLGRHKKLQYVNLVNCRSIRILPSNL-EMESLKFF 678

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L GC KLEK P+ +GN+  L  L+L E    K+ SS+  L  L  L + NC+ L+S+P
Sbjct: 679 TLDGCSKLEKFPDIVGNMNQLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCRNLESIP 737



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 3/111 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GCS L++FP+I  N+  L    L ET I +L SSI +L  L  L
Sbjct: 666 LPSNLEMESLKFFTLDGCSKLEKFPDIVGNMNQLTVLHLDETGITKLSSSIHHLIGLEVL 725

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            + NC  L+S+ S +  LKSL++L+LS C +L+ +P+ +G +ESLE+  L+
Sbjct: 726 SMNNCRNLESIPSSIGCLKSLKKLDLSDCSELQNIPQNLGKVESLEFDGLS 776


>gi|297805566|ref|XP_002870667.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316503|gb|EFH46926.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 228/697 (32%), Positives = 353/697 (50%), Gaps = 97/697 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F+SHL+     + I TF D ++ RG+ I P L  AI  S++SIV
Sbjct: 14  RYHVFSSFHGPDVRSGFLSHLHNHFESKGITTFNDQEIERGHTIGPELVQAIRESRVSIV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------GY-----CPSL 122
           + SE YASS WCL+ELV+IL+ K   GQ V+ +FY VDPSD        GY     C   
Sbjct: 74  VLSEKYASSGWCLDELVEILKCKEASGQAVMTIFYKVDPSDVRKQRGDFGYTFKKTCEGK 133

Query: 123 G------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W+  + D  T          +E+ +I+    D+S KL ++ PS + + +VG+E
Sbjct: 134 TEEVKQRWIKALNDAATIAGENSLNWANEAEMIQKIATDVSNKL-NVTPSRDFEGMVGLE 192

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI--RDES 223
           + + +++S L   S +   +GIWG  GIGKTT+A A+++ +S+ F  S FM  I   D  
Sbjct: 193 AHLTKLDSFLCLESDDVKMIGIWGPAGIGKTTLARALFNQLSTRFRRSCFMGTIDVNDYD 252

Query: 224 EKV----GGLANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFV 270
            K+      L+ I         HL   +  L   +VLIV  D+ DL+Q+++L      F 
Sbjct: 253 SKLCLQNKLLSKILNQKDMRVHHLGAIKEWLHDQRVLIVLDDVDDLEQLEVLAKETSWFG 312

Query: 271 PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSN 330
           PGSR+I+T +D ++LK H    +  ++ V   S  ++  +F  +AF Q+ P  GF EL+ 
Sbjct: 313 PGSRIIVTLKDKKILKAHG---INDIYHVDYPSEKEAFEIFCLSAFKQSSPQDGFEELAR 369

Query: 331 IVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQN 390
            V++    +PLAL+V+GS   G SE+EW   +  ++      I+ VL+V YD L +  Q+
Sbjct: 370 KVVELCGNLPLALRVVGSSFYGESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERHQS 429

Query: 391 IFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGE 450
           +FL  ACFF       V   L       + G++ L  KSLV+ +N  ITMH LLQ++G +
Sbjct: 430 LFLHIACFFNHKSVDYVTTMLADSVLDVENGLNTLAAKSLVS-TNGWITMHCLLQQLGRQ 488

Query: 451 IVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD-------SLKELYLGGCSN 501
           +V Q+   DPGKR  L   ++I  VL   T   +  GI+ D       S+ +       N
Sbjct: 489 VVLQQG--DPGKRQFLVEAKEIRDVLANETGTESVIGISFDISKIEALSISKRAFNRMRN 546

Query: 502 LKRFPEISCNI---EDLD-------------------------------LKETAIEELPS 527
           LK     + NI   ED++                               +  + +E+L  
Sbjct: 547 LKFLNFYNGNISLLEDMEYLPRLRLLHWGSYPRKSLPLAFKPECLVELYMGSSKLEKLWG 606

Query: 528 SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
            I  L+ L  ++L   S LK + + L    +L+ L L+GC  L ++P  I NL+ LE L 
Sbjct: 607 GIQPLTNLKKINLGYSSNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSILNLQKLEMLY 665

Query: 588 LAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            +     + IP+++  L+ L ++ + NC RL+S P++
Sbjct: 666 ASGCSKLQVIPTNI-NLASLEEVNMSNCSRLRSFPDM 701



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 30/164 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLDL 540
           +PT INL SL+E+ +  CS L+ FP++S NI+ L +  T I+E P+SI G   RL  L +
Sbjct: 675 IPTNINLASLEEVNMSNCSRLRSFPDMSSNIKRLYVAGTMIKEFPASIVGQWCRLDFLQI 734

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +              +S +RL          +P      ES+ +L+L   D + IP  +
Sbjct: 735 GS--------------RSFKRLT--------HVP------ESVTHLDLRNSDIKMIPDCI 766

Query: 601 KQLSKLSDLRLQNCKRLQSLP-ELPCGSSIHARHCTSLKTLSNS 643
             LS L  L ++NC +L S+    P   ++ A HC SL+++  S
Sbjct: 767 IGLSHLVSLLVENCTKLVSIQGHSPSLVTLFADHCISLQSVCCS 810


>gi|224116238|ref|XP_002331995.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832119|gb|EEE70596.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 955

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 246/756 (32%), Positives = 372/756 (49%), Gaps = 172/756 (22%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           HDVFLSFRGK+ R+NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+ S++
Sbjct: 14  HDVFLSFRGKETRNNFTSHLYSNLKQRGIDVYMDDRELERGKAIEPALWKAIEESRFSVI 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSLG------ 123
           IFS  YASS WCL+ELVKI++   + GQ V+PVFY VDPS+       Y  + G      
Sbjct: 74  IFSRDYASSPWCLDELVKIVQCMKEMGQTVLPVFYDVDPSEVTERKRKYEEAFGEHEQNF 133

Query: 124 ---------W---------MGIFDIPT-SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                    W         +  +DI   +ES  I+     IS KLS   P+ +K +LVG+
Sbjct: 134 KENLEKVRNWKDCLSTVANLSGWDIRNRNESESIKIIAEYISYKLSVTMPTISK-KLVGI 192

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIA-SAIYSNISSHFEGSYFMQNIRDES 223
           +S ++ +   +     +   +GI G+GGIGKTT+A   + S I    E +    + R   
Sbjct: 193 DSRVEVLNGYIGEEGGKAIFIGICGMGGIGKTTVAREQLLSEI--LMERASVWDSYR--- 247

Query: 224 EKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQ 283
               G+  I     +RR    K+L +  D+ D KQ++        F PGSR+IIT+RD  
Sbjct: 248 ----GIEMI-----KRRSRLKKILHILDDVDDKKQLEFFAAEPGWFGPGSRIIITSRDTN 298

Query: 284 LLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLAL 343
           +L  +  +++   +E ++L+ +D+L LFS+ AF  + P   F+ELS  V+ YANG+PLA+
Sbjct: 299 VLTGNDDTKI---YEAEKLNDDDALMLFSQKAFKNDQPDEDFVELSKQVVGYANGLPLAI 355

Query: 344 QVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND 403
           +V+GS+L   S  EW  A+N++  +P   I  VL++S+DGL + ++ IFLD ACF  G  
Sbjct: 356 EVIGSFLYARSIPEWRGAINRMNEIPDGKIIDVLRISFDGLHESDKKIFLDIACFLMGFK 415

Query: 404 QYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDP--- 460
              +   L++  F A IGI  L+ +SL+++S +++ MH+LLQ MG EIVR ES ++P   
Sbjct: 416 IDRITRILESRGFHAGIGIPVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRR 475

Query: 461 ------------------------------GKRSRLWH---------------------- 468
                                         G +   W+                      
Sbjct: 476 SRLWTYEDVCLALMDSTGKEKIEAIFLDMPGIKEAQWNMEAFSKMSKLRLLKINNVQLSE 535

Query: 469 -PEDIYQVLN-------ENTSLPTGINLDSLKELYLG---------GCS---NLK----- 503
            PED+   L         + SLP G+ +D L EL++          GC    NLK     
Sbjct: 536 GPEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSRIEQLWYGCKSAVNLKIINLS 595

Query: 504 ------------RFPEISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
                       R P    N+E+L L+  T++ E+  S+    +L  + L +C  ++ + 
Sbjct: 596 NSLNLIKTLDFTRIP----NLENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIRILP 651

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-------------------- 590
           S L  ++SL+   L GC KLEK P+ +GN+  L  L+L E                    
Sbjct: 652 SNL-EMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLS 710

Query: 591 ----KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
               K+ E IPSS++ L  L  L L  C  LQ++P+
Sbjct: 711 MNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQ 746



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 3/143 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GCS L++FP+I  N+  L    L ET I +L SSI +L  L  L
Sbjct: 650 LPSNLEMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVL 709

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + NC  L+S+ S +  LKSL++L+LSGC +L+ +P+ +G +E LE ++++     + P+
Sbjct: 710 SMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPA 769

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L  L  L L  CKR+   P
Sbjct: 770 SIFLLKSLKVLSLDGCKRIAVNP 792



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 11/177 (6%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L GCS L+  P+    +E   ++D+  T+I + P+SI  L  L 
Sbjct: 719 SIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLK 778

Query: 537 DLDLTNCS--GLKSVSSRLCNLK---SLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAE 590
            L L  C    +     RL +L    SL  L+L  C L+   LPE+IG L SL+ L+L++
Sbjct: 779 VLSLDGCKRIAVNPTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQ 838

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
            +F  +P S+ QLS L  L L++C+ L+SLPE+P    +++   C  LK + +   L
Sbjct: 839 NNFVSLPESINQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPIKL 895


>gi|105922738|gb|ABF81434.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1307

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 231/661 (34%), Positives = 340/661 (51%), Gaps = 101/661 (15%)

Query: 44  IETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQ 102
           I+ ++DD+ L RG  I P+L  AIE S+IS+VIFS  YASS WCL+ELVKI++   + G 
Sbjct: 75  IDVYMDDRELERGKAIEPALWKAIEESRISVVIFSRDYASSPWCLDELVKIVQCMKEMGH 134

Query: 103 IVVPVFYLVDPSDAGY----------------------------CPSL-----GWMGIFD 129
            V+PVFY VDPSD                               C S      GW  +  
Sbjct: 135 TVLPVFYDVDPSDVAERKRKYEKAFVEHEQNFKENMEKVRNWKDCLSTVANLSGW-DVRH 193

Query: 130 IPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWG 189
              SES+ I      IS KLS   P+ +K +LVG++S ++ +   +     +   +GI G
Sbjct: 194 RNESESIRIIAEY--ISYKLSVTLPTISK-KLVGIDSRLEVLNGYIGEEVGKEIFIGICG 250

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIV 249
           +GGIGKTT+A  +Y  I   FEGS F++NIR++  K  G   +        L     +  
Sbjct: 251 MGGIGKTTVARVLYDRIRWQFEGSCFLENIREDFAKKDGPRRLQEQLLSEILMERASVWD 310

Query: 250 FYDLTDL--------------------KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
            Y   ++                    +Q+  L      F PGSR+IIT+RD Q+L  + 
Sbjct: 311 SYRGIEMIKRRLRLKKILLLLDDVDDKEQLKFLAEEPGWFGPGSRIIITSRDKQVLTRNG 370

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              V  ++E ++L+ +D+LTLFS+ AF  + PA  F+ELS  V+ YANG+PLAL+V+GS+
Sbjct: 371 ---VDRIYEAEKLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSF 427

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           + G S  EW SA+N++  +   +I  VL++S+DGL + E+ IFLD ACF KG  +  ++ 
Sbjct: 428 MHGRSILEWRSAINRIYDILDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIR 487

Query: 410 FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
            LD+C F A IG   L+ KSL+++S +++ MH+LLQ MG EIVR E  K+PGKRSRLW  
Sbjct: 488 ILDSCGFHAHIGTQVLIEKSLISVSRDRVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTY 547

Query: 470 EDIYQVLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEEL 525
           +D++  L +NT         +++  +KE       N+K F ++S  +  L +    + E 
Sbjct: 548 KDVFLALMDNTGKEKIEAIFLDMPGIKEAQW----NMKAFSKMS-RLRLLKIDNVQLSEG 602

Query: 526 PSSIGN--------------------LSRLVDLDLTNCSGLKSVSSRLCNLKS---LRRL 562
           P  + N                    +  LV+L + N     S+    C  KS   L+ +
Sbjct: 603 PEDLSNELRFIEWHSYPSKSLPSGLQVDELVELHMAN----SSLEQLWCGCKSAVNLKII 658

Query: 563 NLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           NLS  L L K P+  G  NLESL           ++  S+    KL  + L NCK ++ L
Sbjct: 659 NLSNSLYLTKTPDLTGIPNLESLILEGCT--SLSEVHPSLAHHKKLQYVNLVNCKSIRIL 716

Query: 621 P 621
           P
Sbjct: 717 P 717



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 89/145 (61%), Gaps = 3/145 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SL    L GCS L++FP+I  N+ +L    L ET I +L SSI +L  L  L
Sbjct: 716 LPNNLEMESLNVFTLDGCSKLEKFPDIVGNMNELMVLRLDETGITKLSSSIHHLIGLGLL 775

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE++G +ESL+  + +     ++P+
Sbjct: 776 SMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPA 835

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL 623
           S+  L  L  L L  CKR+  LP L
Sbjct: 836 SIFILKNLKVLSLDGCKRIVVLPSL 860



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 6/149 (4%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L GCS LK  PE    +E LD      T+I +LP+SI  L  L 
Sbjct: 785 SIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLDEFDASGTSIRQLPASIFILKNLK 844

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            L L  C  +  + S L  L SL  L L  C L+   LPE+IG L SL+ L+L++ +F  
Sbjct: 845 VLSLDGCKRIVVLPS-LSGLCSLEVLGLRACNLREGALPEDIGCLSSLKSLDLSQNNFVS 903

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           +P S+ QL +L  L L++C  L+SLPE+P
Sbjct: 904 LPKSINQLFELEMLVLEDCTMLESLPEVP 932



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)

Query: 1    MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
            +ASSSS        K +VF   R  D    F ++L + L +  I  F + +  +   I  
Sbjct: 1024 LASSSSYHQW----KANVFPGIRVADTGDAF-TYLKSDLAQRFIIPF-EMEPEKVMAIRS 1077

Query: 61   SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
             L  AIE S++SI+IF++  A   WC  ELVKI+   ++     V PV Y V  S
Sbjct: 1078 RLFEAIEESELSIIIFAKDCAYLPWCFEELVKIVGFMDEMRSDTVFPVSYDVKQS 1132


>gi|224127750|ref|XP_002329168.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870949|gb|EEF08080.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1018

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 256/740 (34%), Positives = 360/740 (48%), Gaps = 166/740 (22%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSK 70
           IP  K+DVF+SFRG+D  +N                     L RG+EI  SL  AIE SK
Sbjct: 11  IPARKYDVFISFRGEDTHNN---------------------LRRGDEICSSLLKAIEESK 49

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSLG-- 123
           +S+++FSE YASS+WCL+ELVKILE K   GQ V+PVFY V+PS           S+G  
Sbjct: 50  LSVIVFSENYASSKWCLDELVKILECKEMNGQTVIPVFYHVNPSHVRNQTETVGDSIGEL 109

Query: 124 ------------WMGIF-DIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                       W     ++ T          SES LIE    DI  KL  + P  + + 
Sbjct: 110 ELVTEKMEKVKRWRAALKEVATLTGWDSRNIRSESELIEAIAGDILNKLYKMSPGHSMN- 168

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           LVG+E  IK  ES L   S E  ++ +                                 
Sbjct: 169 LVGIEEHIKRTESLLCMESQEPPSLAV--------------------------------- 195

Query: 221 DESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI-DLLIGRLDGFVPGSRVIITT 279
                          F +  L R KVLIV  D+ + +Q+ +L +G  D F PGS++++T+
Sbjct: 196 --------------AFTKDCLRRKKVLIVLDDVDNSRQLQELSLGVHDLFGPGSKILVTS 241

Query: 280 RDVQ-LLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANG 338
           RD Q L+KN     V  +++V+ L+ +D+L L S NAF +N P    +EL   ++ YA G
Sbjct: 242 RDKQVLIKNG----VDAIYKVQGLNNHDALRLLSLNAFKKNCPKRDHIELLERMVDYAKG 297

Query: 339 VPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACF 398
            PLAL VLGS L   S+E+W SA+NKL ++P+ +IQ+VL++SYDGLD E+Q IFLD A F
Sbjct: 298 NPLALIVLGSSLYDRSKEKWYSALNKLGKVPNPEIQRVLRISYDGLDGEQQQIFLDIAFF 357

Query: 399 FKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIK 458
           F G +    +  LD+C  S +  +S L+ KSL+TIS N + MHD+LQEM   IVR+ES K
Sbjct: 358 FNGAEWNHAVKVLDSCYSSLQFDLSILIDKSLITISQNTLEMHDILQEMAYSIVREES-K 416

Query: 459 DPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD--SLKELYLGG---------------- 498
           +PGKRSRL   EDIY VL +   T    GI LD   + E++L                  
Sbjct: 417 NPGKRSRLCDHEDIYHVLKKKKGTEAVEGICLDISKMPEMHLESDTFARMNSLRFLKFYH 476

Query: 499 --------------CSNLK------------RFPEIS-----C--NIEDLDLKETAIEEL 525
                          S LK            RFP  S     C  NI DL L  + +E+L
Sbjct: 477 PFYFMDSKDKVHLPLSGLKYLSDELKYLHWHRFPAKSLPQNFCAENIVDLTLHSSRVEQL 536

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
            + + +L  L  +DL+  + L  +   L   K+L  ++LS C  L ++   I +LE LE 
Sbjct: 537 WTGVQDLLNLRWIDLSRSTYLLEIPD-LSRAKNLEYIDLSFCESLLEVHSSIQHLEKLEI 595

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSS 644
           L L+  K+   +P  ++    L  L L +CK+++  PE+           T+++ L  S 
Sbjct: 596 LILSGCKNLGIVPKRIES-KFLRILDLSHCKKVRKCPEISGYLEELMLQGTAIEELPQSI 654

Query: 645 TLLTRSSKHWDIFNFSNCSN 664
           +      K   I + S CSN
Sbjct: 655 S----KVKEIRILDLSGCSN 670



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 110/207 (53%), Gaps = 32/207 (15%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           LP  I+ +  ++ L L GCSN+ +FP+I  NI+ L L  T IEE+PSSI  L+ L  L++
Sbjct: 650 LPQSISKVKEIRILDLSGCSNITKFPQIPGNIKQLRLLWTVIEEVPSSIEFLATLGVLEM 709

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             C  L S+ + +C LK L RL LS C KLE  PE +  +ESL+ L+L+    +++PSS+
Sbjct: 710 NFCEQLSSLPTCICKLKCLERLELSYCPKLESFPEILEPMESLKCLDLSGTAIKELPSSI 769

Query: 601 K------------------------QLSKLSDLRLQNCKRLQSLPELPCGSS-IHARHCT 635
           K                        +L  L  L+L  CK L SLPELP     + A  C 
Sbjct: 770 KFLSCLYMLQLNRCDNLVSLPSFIEKLPVLKYLKLNYCKSLLSLPELPPSVEFLEAVGCE 829

Query: 636 SLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           SL+TLS     + + S  W   NF+NC
Sbjct: 830 SLETLS-----IGKESNFW-YLNFANC 850


>gi|297836396|ref|XP_002886080.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331920|gb|EFH62339.1| hypothetical protein ARALYDRAFT_480565 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1098

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 238/724 (32%), Positives = 356/724 (49%), Gaps = 114/724 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS        + VF SF G DVR +F+SH         I  F D K+ R   I+P
Sbjct: 1   MASSSSSRTWT----YRVFASFHGPDVRKSFLSHFRKQFISNGITMFDDQKIVRSQTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           SL+  I  S+ISIVI S+ YASS WCL+EL++IL+ +   GQIV+ VFY VDPSD     
Sbjct: 57  SLTQGIRESRISIVILSKNYASSTWCLDELLEILKCREDIGQIVMTVFYGVDPSDVRKQT 116

Query: 117 --------------------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSD 151
                                +  +L  +G      F    +E+ +IE    D+S+KL +
Sbjct: 117 GEFGTVFNKTCARRTKEERRNWSQALNDVGNIAGEHFLNWDNEAEMIEKIARDVSEKL-N 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
             PS + D +VG+E+ +KEIE  L         VGI+G  GIGKTTIA A++S I + F+
Sbjct: 176 ATPSSDFDGMVGMEAHLKEIELLLDVDYDGVKVVGIFGPAGIGKTTIARALHSLIFNKFQ 235

Query: 212 GSYFMQNIR-------DESE--------------KVGGLANIHLNFERRRLSRMKVLIVF 250
            + F++N+        DE                K+ G+   HL   + RL  MKVLIV 
Sbjct: 236 LTCFVENLSGSYSIGLDEYGLKLRLQEHLLSKILKLDGMRISHLGAVKERLFDMKVLIVL 295

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+ D+KQ++ L      F PGSRVI+TT + ++L+ H    + + + V   S   ++ +
Sbjct: 296 DDVNDVKQLEALANDTTWFGPGSRVIVTTENKEILQRH---GIDNTYHVGFPSDEKAIEI 352

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
             R AF Q+ P  GF  L+  V      +PL L+V+GS L G +E+EW S + +L+ +  
Sbjct: 353 LCRYAFKQSSPRRGFKYLAKNVTWLCGNLPLGLRVVGSSLHGKNEDEWVSVIRRLETIID 412

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
            DI++VL+V Y+ L + EQ++FL  A FF   D  LV   L         G+  +V KSL
Sbjct: 413 RDIEEVLRVGYESLHENEQSLFLHIAVFFNNKDVDLVKAMLADDNLDIAHGLKIMVNKSL 472

Query: 431 VTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGIN 487
           + +S N +I MH LLQ++G + + ++   +P KR  L + ++I  VL  ++ T + +GI+
Sbjct: 473 IYVSTNGEIRMHKLLQQVGKQAINRQ---EPWKRLILTNAQEICHVLENDKGTGVVSGIS 529

Query: 488 LDS-------LKELYLGGCSNL-------------------------------------- 502
            D+       L    L    NL                                      
Sbjct: 530 FDTSGISEVILSNRALRRMCNLRFLSVYKTRHDGNDIMHIPDDMKFPPRLRLLHWEAYPS 589

Query: 503 KRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
           K  P   C  N+ +L++K++ +E+L      L  L  +DL+    LK +   L N  +L 
Sbjct: 590 KSLPLGFCLENLVELNMKDSQLEKLWEGTQLLRNLKKMDLSRSVHLKELPD-LSNATNLE 648

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           RL L  C+ L +LP  IGNL  LE L ++     E IP+ +  L+ L  + +  C RL++
Sbjct: 649 RLELGDCMALVELPTSIGNLHKLENLVMSNCISLEVIPTHI-NLASLEHITMTGCSRLKT 707

Query: 620 LPEL 623
            P+ 
Sbjct: 708 FPDF 711



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 91/182 (50%), Gaps = 34/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ + + GCS LK FP+ S NIE L L+ T++E++P+SI + SRL D  + 
Sbjct: 685 IPTHINLASLEHITMTGCSRLKTFPDFSTNIERLLLRGTSVEDVPASISHWSRLSDFCIK 744

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +   LKS                     L   PE +      E L L+  D E IP  +K
Sbjct: 745 DNGSLKS---------------------LTHFPERV------ELLTLSYTDIETIPDCIK 777

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIH-ARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
               L  L +  C++L SLPELP    +  A  C SL+ +  +  L T S++     NF+
Sbjct: 778 GFHGLKSLDVAGCRKLTSLPELPMSLGLLVALDCESLEIV--TYPLNTPSAR----LNFT 831

Query: 661 NC 662
           NC
Sbjct: 832 NC 833


>gi|295083309|gb|ADF78108.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 362/740 (48%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 116 -AGYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTEVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNNK------ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +       +TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPIVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGVWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSCCYSLESFPKI 722



 Score = 42.7 bits (99), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 38/194 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLF 759

Query: 543 CSG---LKSVSS--RLCNLKSLRRLNLSG--CLKLEKLPEEIGNLES------------- 582
            S     K  SS   +  L  +R L L G   LK E+  E+ G++ S             
Sbjct: 760 LSPHTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEMLTVAICNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +   +K+   L  L + +CK L+ +  +P    
Sbjct: 820 SDEFFSIDFTWFAHMKELCLSENNFTILRECIKECQFLRKLDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLS 641
              A +C SL + S
Sbjct: 880 HFFAINCKSLTSSS 893


>gi|295083313|gb|ADF78110.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 362/740 (48%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 116 -AGYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTEVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNNK------ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +       +TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPIVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGVWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSCCYSLESFPKI 722



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 38/194 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLF 759

Query: 543 CSG---LKSVSS--RLCNLKSLRRLNLSG--CLKLEKLPEEIGNLES------------- 582
            S     K  SS   +  L  +R L L G   LK E+  E+ G++ S             
Sbjct: 760 LSPHTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEMLTVAICNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F   P  +K+   L  L + +CK L+ +  +P    
Sbjct: 820 SDEFFSIDFTWFAHMKELCLSENNFTIPPECIKECQFLGKLDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLS 641
              A +C SL + S
Sbjct: 880 HFFAINCKSLTSSS 893


>gi|255561520|ref|XP_002521770.1| conserved hypothetical protein [Ricinus communis]
 gi|223538983|gb|EEF40580.1| conserved hypothetical protein [Ricinus communis]
          Length = 465

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 168/355 (47%), Positives = 228/355 (64%), Gaps = 23/355 (6%)

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            VG++S I+ +ES L  GS++ + VGIWG+ GIGKTTIA A++    + F+  YF  N+R
Sbjct: 6   FVGIDSRIERVESLLCLGSSDVSIVGIWGMAGIGKTTIAEAVFKRNVASFDTCYFFANVR 65

Query: 221 DESEKVGGL-----------ANIHL---NFERRRLSRMKVLIVFYDL-TDLKQIDLLIGR 265
           +ESEK G L              H     + + RLS  K LIV  D+ + L+  +LL+  
Sbjct: 66  EESEKHGSLHLRTQLLSKICGKAHFRRFTYRKNRLSHGKALIVLDDVNSSLQMQELLVEG 125

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
              F  GS+VI+T+RD Q+LKN     V  ++EV  L+ N++L LFS N F QNHP   F
Sbjct: 126 RHLFGEGSKVIVTSRDRQVLKNG----VDEIYEVDGLNLNEALQLFSINCFNQNHPLEEF 181

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
           ++LS  VI YA G PLAL+VLG +L   S+++WE A++KLKR  ++ ++ VL++SYDGL+
Sbjct: 182 MQLSKRVIYYAKGNPLALKVLGCFLLDKSKQDWEIALDKLKRTSNIGMKNVLRLSYDGLE 241

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
            E++ IFLD ACFFKG D   V   LD C F   IG++ LV KSL+T+SN K+ MHDL+Q
Sbjct: 242 IEDKEIFLDIACFFKGEDVCFVERILDGCGFYVDIGLNNLVDKSLITVSNGKLWMHDLIQ 301

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKELYL 496
           EMG E V+QES  +PG+RSRLWH EDIY VL +NT      GI LD    +EL+L
Sbjct: 302 EMGWETVQQESTGEPGERSRLWHHEDIYHVLTKNTGTKAVEGITLDLSETRELHL 356


>gi|295083311|gb|ADF78109.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 362/740 (48%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 116 -AGYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTEVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNNK------ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +       +TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPIVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGVWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSCCYSLESFPKI 722



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 38/194 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSCCYSLESFPKILGKMENIRQLWLSESSITELPFSFQNLAGLRGLELLF 759

Query: 543 CSG---LKSVSS--RLCNLKSLRRLNLSG--CLKLEKLPEEIGNLES------------- 582
            S     K  SS   +  L  +R L L G   LK E+  E+ G++ S             
Sbjct: 760 LSPHTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSKVEMLTVAICNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L + +CK L+ +  +P    
Sbjct: 820 SDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRKLDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLS 641
              A +C SL + S
Sbjct: 880 HFFAINCKSLTSSS 893


>gi|357469487|ref|XP_003605028.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506083|gb|AES87225.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1340

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 244/675 (36%), Positives = 344/675 (50%), Gaps = 85/675 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           HDVFLSFRG   R++F  HL  +L R+ I  F DD+ L  G+EI PSL  AIE S+ISIV
Sbjct: 10  HDVFLSFRG-GTRYSFTDHLYRSLLRQGINVFRDDQNLKIGHEIGPSLLQAIEASRISIV 68

Query: 75  IFSEGYASSRWCLNELVKILE-------SKNKYGQIV-------------VPVFYLVDPS 114
           +  + YASS WCL+ELVKI++       SKN Y   +             V  + L   +
Sbjct: 69  VLCKEYASSTWCLDELVKIVDCYENNGKSKNSYEDAIRKHEKRFGRESEKVKAWKL---A 125

Query: 115 DAGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQ 174
               C   G     D+  SE   IE  V DIS KL  + P   K  LVG+ +  K+++S 
Sbjct: 126 LNRVCALSGLHCKDDVYESE--FIEKIVRDISTKLPTV-PLQIK-HLVGLNTRFKQVKSI 181

Query: 175 L-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES-EKVGGLANI 232
           + ++ S     +GI+G GGIGKT  A  IY+ I   FE + F+ N+R++S E +GGL N+
Sbjct: 182 IDINSSERICMLGIYGAGGIGKTQFALHIYNKIRHQFEAASFLANVREKSNESIGGLENL 241

Query: 233 HLNFE--------------------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPG 272
                                    + RLS  +VL++  D+  +KQ++ L G  D F  G
Sbjct: 242 QRTLLNEIGEATQVFGSSFRGSSEIKHRLSHKRVLLILDDVDSVKQLESLAGGHDWFNSG 301

Query: 273 SRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIV 332
           S +IITTRD+ +L  H+       ++++EL++++S  LF   AF  + P   F ++S+  
Sbjct: 302 SIIIITTRDIDIL--HKHDVKIKPYKLEELNHHESTELFCWYAFNMSRPVENFEKISSHA 359

Query: 333 IKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIF 392
           I YA G+PLAL+V+GS LKG S EEW+  + K +++P  +IQ V+++SY GL D +Q IF
Sbjct: 360 ISYAKGIPLALRVIGSNLKGKSIEEWDIELQKYRKVPDAEIQGVMEISYKGLSDLDQKIF 419

Query: 393 LDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITMHDLLQEMGGEI 451
           LD ACFFKG         LDAC F     I     K L+T+  N  + MHDL+Q+MG EI
Sbjct: 420 LDIACFFKGERWDYAKRILDACDFYPV--IRAFNSKCLITVDENGLLQMHDLIQDMGREI 477

Query: 452 VRQESIKDPGKRSRLWHPEDIYQVLNEN---TSLPTGINLDSLKELYLGGCSNL------ 502
           VR+ES  +PG+RSRLW  +D+  VL  N   T +   I L     L+  G S L      
Sbjct: 478 VRKESTSNPGERSRLWSHKDVLDVLKGNLGSTKVEGMIILIVRNTLFSSGPSYLPNNLRL 537

Query: 503 --------KRFPEISCNIEDLDLKETAIEELPSSIGNLSR----LVDLDLTNCSGLKSVS 550
                   K FP        +D K      LP S   L +      DL L N S  +S++
Sbjct: 538 LDWKCYPSKDFPLNFYPYRIVDFK------LPHSSMILKKPFQIFEDLTLINLSHSQSIT 591

Query: 551 S--RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
               L   K+LR   L  C KL +    IG + ++ YL+ +E    K       L  L  
Sbjct: 592 QVPDLSGAKNLRVFTLDKCHKLVRFDISIGFMPNMVYLSASECTELKSFVPKIYLPSLQV 651

Query: 609 LRLQNCKRLQSLPEL 623
           L    CK+ +  P++
Sbjct: 652 LSFNYCKKFEYFPQV 666



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 469 PEDIYQVLNENTSLPT---GINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAI 522
           P  +Y   +E T L +    I L SL+ L    C   + FP++   ++    + +  TAI
Sbjct: 624 PNMVYLSASECTELKSFVPKIYLPSLQVLSFNYCKKFEYFPQVMQKMDKPLKIHMISTAI 683

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL------------ 570
           +E P SI NL+ L  +D++ C GLK +SS    L  L  L + GC +L            
Sbjct: 684 KEFPKSILNLTGLEYIDMSICKGLKDLSSSFLLLPRLVTLKIDGCSQLGQSFQRFNERHS 743

Query: 571 --------------------EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
                               E +   I N   L YL ++   F  +P+ ++    L  L 
Sbjct: 744 VANKYSNLEALHFSEANLSDEDVNAIIENFPKLAYLKVSHNGFVSLPNCIRGSMHLKSLD 803

Query: 611 LQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
           +  C+ L  + ELP     I ARHC SL TL  SS L ++ S+
Sbjct: 804 VSFCRNLTEVSELPLSIQKIDARHCKSL-TLDASSVLWSKVSQ 845


>gi|147792369|emb|CAN74711.1| hypothetical protein VITISV_009242 [Vitis vinifera]
          Length = 1354

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 241/721 (33%), Positives = 363/721 (50%), Gaps = 118/721 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I TF DD+ L +G +I+  L  AIE S I I+
Sbjct: 19  YDVFLSFRGGDTRKNFTDHLYTTLTSYGIHTFKDDEELEKGGDIASDLLRAIEESTIFII 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG---------- 123
           IFS+ YA SRWCLNELVKI+E K++   +V+P+FY VDPSD      S G          
Sbjct: 79  IFSKNYAYSRWCLNELVKIIERKSQKESLVLPIFYHVDPSDVRNQKGSFGDANQEKKEMV 138

Query: 124 --W----------MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI 171
             W           G       E+ +++  VN I ++L+    S  K+ +VG+   ++++
Sbjct: 139 QKWRIALRKAANLCGCHVDDQHETEVVKEIVNTIIRRLNHQPLSVGKN-IVGISVHLEKL 197

Query: 172 ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES-------- 223
           +S + +   + + VGI GIGG GKTTIA AIY+ IS  ++GS F++NIR+ S        
Sbjct: 198 KSLMNTNLNKVSVVGICGIGGAGKTTIAKAIYNEISYQYDGSSFLKNIRERSKGDILQLQ 257

Query: 224 -EKVGGL---ANIHLN-------FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPG 272
            E + G+    N  +N         +R LS  +VL++F D+ +LKQ++ L    D F   
Sbjct: 258 QELLHGILKGKNFKVNNIDEGISMIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFEAK 317

Query: 273 SRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIV 332
           S +IIT+RD Q+L  +    V   +EV +L+  +++ +FS  AF  N P   +  LS  +
Sbjct: 318 STIIITSRDKQVLAQYG---VDISYEVSKLNKKEAIEVFSLWAFQHNLPKEVYKNLSYNI 374

Query: 333 IKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIF 392
           I YANG+PLAL+VLG  L G +  EWESA+ KLK +PH++I    +          + +F
Sbjct: 375 IDYANGLPLALKVLGGSLFGKTTSEWESALCKLKTIPHIEIHNGTQAI--------EGLF 426

Query: 393 LDTACF---FKGNDQYLVMNFLDACRFSA---KIGISRLVGKSLVTIS------------ 434
           LD   F   +   + +  MN L   +  +   K+ +   + +     S            
Sbjct: 427 LDRCKFNPSYLNRESFKEMNRLRLLKIRSPRRKLFLEDHLPRDFAFSSYELTYLYWDGYP 486

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--------ENTSLPTGI 486
           +  + M+   + +   ++R  +IK      +LW    +++ L             +P   
Sbjct: 487 SEYLPMNFHAKNLVELLLRTSNIK------QLWRGNKLHEKLKVIDLSYSVHLIKIPDFS 540

Query: 487 NLDSLKELYLGGCSNL------------------------KRFPEISCN---IEDLDLKE 519
           ++ +L+ L L GC NL                        +RFPEI  N   +  LDL  
Sbjct: 541 SVPNLEILTLEGCVNLELLPRGIYKLKHLQTLSFNGCSKLERFPEIKGNMGKLRVLDLSG 600

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE-KLPEEIG 578
           TAI +LPSSI +L+ L  L L +CS L  +   +C+L SL  L+L  C  +E  +P +I 
Sbjct: 601 TAIMDLPSSISHLNGLQTLLLEDCSKLHKIPIHICHLSSLEVLDLGNCNIMEGGIPSDIC 660

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI---HARHCT 635
           +L SL+ LNL    F  IP+++ QLS+L  L L +C  L+ +PELP    +   H  +CT
Sbjct: 661 HLSSLQKLNLEGGHFSCIPATINQLSRLKALNLSHCNNLEQIPELPSSLRLLDAHGSNCT 720

Query: 636 S 636
           S
Sbjct: 721 S 721



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 93/208 (44%), Gaps = 52/208 (25%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRL 535
            TSLP+ I    SL  L   GCS L+ FPEI  ++E L    L  TAI E+PSSI  L  L
Sbjct: 961  TSLPSSIFGFKSLAALSCSGCSQLESFPEIVQDMESLIKLYLDGTAIREIPSSIQRLRGL 1020

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL--------- 586
              L L+ C  L ++   +CNL S + L +S C    KLP+ +G L+SLE+L         
Sbjct: 1021 QSLFLSQCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEHLFIGYLDSMN 1080

Query: 587  --------------------NLAE------------------KDFEKIPSSMKQLSKLSD 608
                                NL E                    F +IP  + QL  L  
Sbjct: 1081 FQLPSLSGLCSLRILMLQACNLREIPSEIYYLSSLVTLYLMGNHFSRIPDGISQLYNLKH 1140

Query: 609  LRLQNCKRLQSLPELPCG-SSIHARHCT 635
              L +CK LQ +PELP G + + A HCT
Sbjct: 1141 FDLSHCKMLQHIPELPSGLTYLDAHHCT 1168



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 64/125 (51%), Gaps = 13/125 (10%)

Query: 516  DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            D+ E  I E P  + +L       L +C  L S+ S +   KSL  L+ SGC +LE  PE
Sbjct: 936  DMNEVPIMENPLELDSLC------LRDCKNLTSLPSSIFGFKSLAALSCSGCSQLESFPE 989

Query: 576  EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCT 635
             + ++ESL  L L      +IPSS+++L  L  L L  CK L +LPE  C       + T
Sbjct: 990  IVQDMESLIKLYLDGTAIREIPSSIQRLRGLQSLFLSQCKNLVNLPESIC-------NLT 1042

Query: 636  SLKTL 640
            S KTL
Sbjct: 1043 SFKTL 1047


>gi|295083331|gb|ADF78119.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 362/740 (48%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 117 --GYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTEVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNNK------ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +       +TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPIVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSVELDGLWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSFCYSLESFPKI 722



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 38/199 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLRGLELLF 759

Query: 543 CSG---LKSVSS--RLCNLKSLRRLNLSG--CLKLEKLPEEIGNLES------------- 582
            S     K  SS   +  L  +R L L G   LK E+  E+ G++ S             
Sbjct: 760 LSPHTIFKVPSSIVLMPELTVIRALGLKGWQWLKQEEGEEKTGSIVSSMVEMLTVSSCNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L + +CK L+ +  +P    
Sbjct: 820 CDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLSNSSTL 646
              A +C SL + S S  L
Sbjct: 880 HFFAINCKSLTSSSISKFL 898


>gi|357513683|ref|XP_003627130.1| NBS-LRR disease resistance-like protein [Medicago truncatula]
 gi|355521152|gb|AET01606.1| NBS-LRR disease resistance-like protein [Medicago truncatula]
          Length = 536

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 210/527 (39%), Positives = 293/527 (55%), Gaps = 73/527 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF+SFRG+D R  F SHL+ ALC+E I T+IDD L +G+EI  +L+ AI+ S+IS+V
Sbjct: 7   KYDVFISFRGQDTRETFTSHLHYALCKENIITYIDDNLVKGDEIGEALAEAIQDSRISLV 66

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------------------- 114
           +FS+ YA+S+WCLNEL+KILE K  +GQ+V+PVFY    S                    
Sbjct: 67  VFSKNYATSKWCLNELLKILECKKLHGQVVIPVFYNTGTSEVRNQTGSYEKPFSHYEIEA 126

Query: 115 ------------------DAGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSD 156
                             +A   P  GW         +S +I+  V+D+ KKL+ ++P++
Sbjct: 127 INNESFANTVSEWRAALAEAANIP--GWDSQSRTYKDDSQVIQSIVSDVWKKLALMYPNE 184

Query: 157 NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
            K  LV  +      ES L      ++ +GIWG+GGIGKTTIA  +++   + +E + FM
Sbjct: 185 LKG-LVHNDQHGSYTESLL----KRYSRIGIWGMGGIGKTTIARQMFAKHFAQYESACFM 239

Query: 217 QNIRDESEKVGG--LANIHLN----------------FERRRLSRMKVLIVFYDLTDLKQ 258
           +N+ +E EK G   + N  L+                F  R LS  K  IV  D+ +  Q
Sbjct: 240 ENVSEEIEKFGPRYIRNKLLSELLKRQITASDILGAPFIERILSGRKFFIVLDDVDNAAQ 299

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L   LD   P SR+IIT RD Q LK     +V  + EV + ++ +SL LFS  AF Q
Sbjct: 300 LEYLCSELDDLGPNSRLIITGRDRQTLK----GKVDVIHEVTKWNFEESLRLFSLGAFKQ 355

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH--MDIQKV 376
           NHP  G+  LS   + YA GVPLAL+VLGS+    S E WE  +  L+        IQ+V
Sbjct: 356 NHPKEGYKLLSQRAVAYAGGVPLALKVLGSHFYSRSPEFWEPELKNLENKGESLRGIQEV 415

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
           L+VSY+GL   E+ +FLD A FFK   +  V   LDAC F+A  GI  L  K+L+TIS +
Sbjct: 416 LRVSYNGLTVREKEMFLDIAFFFKDEKRDFVTRILDACGFNAASGIVTLEDKALITISYD 475

Query: 436 NKITMHDLLQEMGGEIVRQ---ESIKDPGKRSRLWHPEDIYQVLNEN 479
           N I MHDLLQ+M  +IVRQ   ++ +DP K SRL   +++  VL  N
Sbjct: 476 NIIQMHDLLQQMAFDIVRQKKDQTSRDPEKCSRLRDIKEVCDVLKNN 522


>gi|15238695|ref|NP_197298.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9757889|dbj|BAB08396.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|91806874|gb|ABE66164.1| disease resistance protein [Arabidopsis thaliana]
 gi|332005108|gb|AED92491.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 780

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 238/768 (30%), Positives = 365/768 (47%), Gaps = 160/768 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VF SF G+DVR NF+SHL+  L    I+ F D  + R   I P L  AI  SKI IV+
Sbjct: 16  YHVFPSFCGEDVRRNFLSHLHKELQHNGIDAFKDGGIKRSRSIWPELKQAIWESKIFIVV 75

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-----IFDI 130
            S+ YA S WCL+ELV+I+E +   G+ +VP+FY VDPS        G  G     I D+
Sbjct: 76  LSKNYAGSCWCLDELVEIMECREVVGKTLVPIFYDVDPSSVR--KQTGDFGKAFDKICDV 133

Query: 131 PTSE--------------------------SVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
            T E                          + +IE  V  +S++L     S + + L+G+
Sbjct: 134 RTEEERQRWRQALTNVGNIAGECSSKWDNDAKMIEKIVAYVSEELFCFTSSTDFEDLLGL 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS----HFEGSYFMQNIR 220
           E+ +  ++S L   S E   +G+WG  GIGKTTI   +Y+ +SS     F+   FM+N++
Sbjct: 194 EAHVANLKSMLGLESNEVKMIGVWGPAGIGKTTITRILYNQLSSSNDDDFQLFIFMENVK 253

Query: 221 D--ESEKVGG-----------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQ 258
                +++ G           L+ I         HL   + RL   K LIV  D+ +L+Q
Sbjct: 254 GSYRRKEIDGYSMKLHLRERFLSEITTQRKIKVSHLGVAQERLKNQKALIVLDDVDELEQ 313

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L  +      G+R+++TT D QLLK H    + HV+EV   S +++L +  + AFG+
Sbjct: 314 LRALADQTQWVGNGTRILVTTEDRQLLKAH---GITHVYEVDYPSRDEALKILCQCAFGK 370

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           N    G+ +L+  V++ A  +PL L VLG+ L+GMS++EW +A+ +L+   +  I+K+L+
Sbjct: 371 NSAPEGYNDLAVEVVELAGYLPLGLSVLGASLRGMSKKEWINALPRLRTSLNGKIEKLLR 430

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNK 437
           V Y+GLD++++ IFL  AC F G +   V   L       + G+  LV +SL+ I ++  
Sbjct: 431 VCYEGLDEKDKAIFLHIACLFNGKNVDRVKLLLAKSALDVEFGLKVLVDRSLIHIDADGY 490

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD------ 489
           I MH LLQ++G EI R + + +PGKR  L    +I  VL + T   T  GI+LD      
Sbjct: 491 IVMHCLLQQLGKEITRGQCLDEPGKRKFLVDSLEISDVLADETGTETVLGISLDMSEIED 550

Query: 490 --SLKELYLGGCSNL------KRFPEISCNIE---------------------------- 513
              + E       NL      K FP+ +  +                             
Sbjct: 551 QVYVSEKAFEKMPNLQFLWLYKNFPDEAVKLYLPHGLDYLPRKLRLLHWDSYPKKCLPSK 610

Query: 514 -------DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV----------------- 549
                  +L ++++ +E+L   I  L  L  +DL+  + +K +                 
Sbjct: 611 FRPEFLVELTMRDSKLEKLWEGIQPLKSLKRMDLSASTKIKDIPNLSRATNLEKLYLRFC 670

Query: 550 -------SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN--------------- 587
                  SS L NL  L+ L++S C+KL+ LP+ I NL+SL  LN               
Sbjct: 671 KNLVIVPSSCLQNLHKLKVLDMSCCIKLKSLPDNI-NLKSLSVLNMRGCSKLNNFPLIST 729

Query: 588 ------LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
                 L E   EK+PS +K  S+L  L +  CK L++LP LP    I
Sbjct: 730 QIQFMSLGETAIEKVPSVIKLCSRLVSLEMAGCKNLKTLPYLPASIEI 777


>gi|227438127|gb|ACP30553.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1290

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 247/725 (34%), Positives = 361/725 (49%), Gaps = 103/725 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSS S       ++DVF SF G+DVR +F+SHL   L R+ I TFID  + R   I P
Sbjct: 1   MASSSCS------RRYDVFPSFSGEDVRKSFLSHLLKELDRKSIITFIDHGIKRSRPIGP 54

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
            L SAI  S+IS ++FS+ YASS WCLNELV+I +   +  Q V+P+FY VDPSD     
Sbjct: 55  ELLSAIRESRISDIVFSKSYASSSWCLNELVEIHKCYMEVDQTVIPIFYGVDPSDVRKQT 114

Query: 116 AGYCPSLG-------------WM-GIFDIP----------TSESVLIEGNVNDISKKLSD 151
             +  + G             WM  + ++            +E+ LI+   +++S KL  
Sbjct: 115 GEFGKAFGETSKGTTEDEKQRWMRALAEVANMAGEDLQNWCNEANLIDKIADNVSNKL-- 172

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + PS+     VGVE+ ++ +   L   S E   VGI G  GIGKTTIA A++S +SS F 
Sbjct: 173 ITPSNYFGDFVGVEAHLEAMNQLLCIESEEARMVGIVGPSGIGKTTIARALFSQLSSRFH 232

Query: 212 GSYFMQNIRDESEKVG-----------------GLANIHLNFERRRLSRMKVLIVFYDLT 254
              F+   R   +  G                  L   +L   ++RL   KVLI   D+ 
Sbjct: 233 YRAFLAYRRTIQDDYGMKLCWEERFLSEILCQKELKICYLGVVKQRLKLKKVLIFLDDVD 292

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           D++ +  L+GR   F  GSR+I+ ++D QLLK H    +  V++V+  S + +L +  R+
Sbjct: 293 DVELLKTLVGRTKWFGSGSRIIVISQDRQLLKAHD---IDLVYKVEFPSEDVALKMLCRS 349

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AFGQN P  GF+EL+  V K A  +PL L VLGS L+G  ++EW   + +L+      ++
Sbjct: 350 AFGQNSPPNGFMELAVEVAKLAGNLPLGLNVLGSSLRGRGKDEWMKMMPRLRNYLDGKVE 409

Query: 375 KVLKVSYDGLDDEEQNIFLDTAC--FFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           K L+VSYD LD ++Q +FL  A    F G     + + L     S   G+  L  KSL+ 
Sbjct: 410 KTLRVSYDRLDGKDQELFLFIAFARLFNGVQVSYIKDLLGD---SVNTGLKTLADKSLIR 466

Query: 433 I-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           I SN  I MH+LL ++  EI R ESI +PGKR  L   EDI  V  + T   T  G+  +
Sbjct: 467 ITSNETIEMHNLLHKLAREIFRAESINNPGKRRFLVDVEDIRDVFTDKTGTETVLGLYFN 526

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKE-------TAIEELPSSIGNLSR-------- 534
           +LK L      + K F E  CN++ L +++            LP  +  L R        
Sbjct: 527 ALK-LEEPFSMDEKSF-EGMCNLQFLIVRDYVGYWVPQGKLHLPQGLFYLPRKLRLLRWD 584

Query: 535 ---------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
                          LV+L + N S L+ +      L  L++L +S    L++LP ++ N
Sbjct: 585 GYPSKCLPSNFKAEYLVELRMKN-SSLEKLWEGTLPLGRLKKLIMSWSTYLKELP-DLSN 642

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCT 635
            +SLE + L         PSS++ L KL +L L+ C  L+S P L    S   ++ R C+
Sbjct: 643 AKSLEEVYLDRCTSLVTFPSSIQNLHKLRELDLEGCTELESFPTLINLKSLEYLNLRECS 702

Query: 636 SLKTL 640
            L+  
Sbjct: 703 RLRNF 707



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 56/86 (65%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT +NL SL+ LYL GCS L+ FP+IS +I  L L +TAIEE+P  I N  RL +L ++
Sbjct: 837 LPTDVNLSSLRTLYLSGCSRLRSFPQISRSIASLYLNDTAIEEVPCCIENFWRLSELSMS 896

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGC 567
            C  LK++S     L+SL  ++ S C
Sbjct: 897 GCKRLKNISPNFFRLRSLHLVDFSDC 922



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 81/136 (59%), Gaps = 7/136 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SL+ + +  C NL   P++S   N+  L L    ++  +PS+IG+L +LV L++  C+
Sbjct: 773 LGSLEMMDVSSCENLTEIPDLSMAPNLMYLRLNNCKSLVTVPSTIGSLCKLVGLEMKECT 832

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ + + + NL SLR L LSGC +L   P+   ++ SL YLN  +   E++P  ++   
Sbjct: 833 MLEVLPTDV-NLSSLRTLYLSGCSRLRSFPQISRSIASL-YLN--DTAIEEVPCCIENFW 888

Query: 605 KLSDLRLQNCKRLQSL 620
           +LS+L +  CKRL+++
Sbjct: 889 RLSELSMSGCKRLKNI 904



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 73/186 (39%), Gaps = 40/186 (21%)

Query: 477 NENTSLPTGINLDSLKELYLGGCSNLKRFPEISCN------------------------- 511
            E  S PT INL SL+ L L  CS L+ FP+I  N                         
Sbjct: 679 TELESFPTLINLKSLEYLNLRECSRLRNFPQIYINSSQGFSLEVEGCFWNNNLCGLDYLG 738

Query: 512 --------------IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
                         +  L +K   +E L   +  L  L  +D+++C  L  +   L    
Sbjct: 739 CIMRCIPCKFRPEQLIGLTVKSNMLERLWEGVQCLGSLEMMDVSSCENLTEIPD-LSMAP 797

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           +L  L L+ C  L  +P  IG+L  L  L + E    ++  +   LS L  L L  C RL
Sbjct: 798 NLMYLRLNNCKSLVTVPSTIGSLCKLVGLEMKECTMLEVLPTDVNLSSLRTLYLSGCSRL 857

Query: 618 QSLPEL 623
           +S P++
Sbjct: 858 RSFPQI 863



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 48/210 (22%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKE-TAIEELPSSIGNLSRLVD 537
           LP   N  SL+E+YL  C++L  FP    N+    +LDL+  T +E  P+ I NL  L  
Sbjct: 637 LPDLSNAKSLEEVYLDRCTSLVTFPSSIQNLHKLRELDLEGCTELESFPTLI-NLKSLEY 695

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL----------------------------- 568
           L+L  CS L++      N      L + GC                              
Sbjct: 696 LNLRECSRLRNFPQIYINSSQGFSLEVEGCFWNNNLCGLDYLGCIMRCIPCKFRPEQLIG 755

Query: 569 ------KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                  LE+L E +  L SLE ++++  ++  +IP  +     L  LRL NCK L ++P
Sbjct: 756 LTVKSNMLERLWEGVQCLGSLEMMDVSSCENLTEIP-DLSMAPNLMYLRLNNCKSLVTVP 814

Query: 622 ELPCGS-----SIHARHCTSLKTLSNSSTL 646
               GS      +  + CT L+ L     L
Sbjct: 815 S-TIGSLCKLVGLEMKECTMLEVLPTDVNL 843


>gi|356524097|ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 205/528 (38%), Positives = 292/528 (55%), Gaps = 64/528 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           + DVFLSFRG D R      L ++L    +  F+DD  L RG EI   L  AI+ S   I
Sbjct: 22  RWDVFLSFRGIDTRDTITKGLYSSLEARGVRVFLDDVGLERGEEIKQGLMEAIDDSAAFI 81

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS---------DAGYCP---- 120
           VI SE YA+S WCL EL KI ++    G++V+PVFY VDPS         +AG+      
Sbjct: 82  VIISESYATSHWCLEELTKICDT----GRLVLPVFYRVDPSHVRDQKGPFEAGFVEHERR 137

Query: 121 --------------SLGWMGIFDIP---TSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                          LG  G+   P   + E  LI   V  I K+LS+  P       VG
Sbjct: 138 FGKNEVSMWREAFNKLG--GVSGWPFNDSEEDTLIRLLVQRIMKELSNT-PLGAPKFAVG 194

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++  ++++   L   S     +G++G+GG+GKTT+A A+++N+ +HFE   F+ N+R+ S
Sbjct: 195 LDERVEKLMKVLQVQSNGVKVLGLYGMGGVGKTTLAKALFNNLLNHFEHRCFISNVREVS 254

Query: 224 EKVGGLANIHLNF---------------ERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
            K  GL ++                   +  +    +VL+V  D+ D+KQ+D LIG+ + 
Sbjct: 255 SKQDGLVSLRTKIIEDLFPEPGSPTIISDHVKARENRVLLVLDDVDDVKQLDALIGKREW 314

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F  GSRVIITTRD  L+KNH    V  ++EV+EL+++++L LFS +A  +N P   FL L
Sbjct: 315 FYDGSRVIITTRDTVLIKNH----VNELYEVEELNFDEALELFSNHALRRNKPPENFLNL 370

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           S  ++     +PLAL+V GS+L      EEWE AV KL+++    +Q VLK+SYD LD+E
Sbjct: 371 SKKIVSLTGRMPLALEVFGSFLFDKRRVEEWEDAVEKLRQIRPKHLQDVLKISYDALDEE 430

Query: 388 EQNIFLDTACFF--KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKITMHDL 443
           E+ IFLD AC F   G  +  V++ L  C F  +I I+ LV K L+ I+  +N + MHD 
Sbjct: 431 EKCIFLDMACLFVQMGMKRDDVIDVLRGCGFRGEIAITVLVQKCLIKITDEDNTLWMHDQ 490

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD 489
           +++MG +IV  ESI DPGKRSRLW   +I  VL  +  T    GI LD
Sbjct: 491 IRDMGRQIVVDESIVDPGKRSRLWDRAEIMSVLKGHMGTRCIQGIVLD 538



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 119/264 (45%), Gaps = 32/264 (12%)

Query: 414  CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI- 472
            C+F +K+  S     S+V +  +  T+ DL  E+G E+     ++    ++  + PE I 
Sbjct: 891  CKFLSKLPNSIKTLASVVELQLDGTTITDLPDEIG-EMKLLRKLEMMNCKNLEYLPESIG 949

Query: 473  -------YQVLNENT-SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKET 520
                     + N N   LP  I  L++L  L L  C  L + P    N++ L    ++ET
Sbjct: 950  HLAFLTTLNMFNGNIRELPESIGWLENLVTLRLNKCKMLSKLPASIGNLKSLYHFFMEET 1009

Query: 521  AIEELPSSIGNLSRLVDLDLTNCSGLKS-----------------VSSRLCNLKSLRRLN 563
             +  LP S G LS L  L +     L +                 ++   CNL  L  L+
Sbjct: 1010 CVASLPESFGRLSSLRTLRIAKRPNLNTNENSFLAEPEENHNSFVLTPSFCNLTLLTELD 1069

Query: 564  LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                    K+P+E   L  LE L L   DF+K+PSS+K LS L  L L NC +L SLP L
Sbjct: 1070 ARSWRISGKIPDEFEKLSQLETLKLGMNDFQKLPSSLKGLSILKVLSLPNCTQLISLPSL 1129

Query: 624  PCG-SSIHARHCTSLKTLSNSSTL 646
            P     ++  +C +L+T+ + S L
Sbjct: 1130 PSSLIELNVENCYALETIHDMSNL 1153



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 10/151 (6%)

Query: 494 LYLGGCSNLKRFPEIS-CN-IEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L L  C  L   P++S C  +E +DL+    +  +  SIG+LS L  L LT CS L ++ 
Sbjct: 674 LNLSYCIELTAIPDLSGCRRLEKIDLENCINLTNIHDSIGSLSTLRSLKLTRCSSLINLP 733

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
             +  LK L  L LSGC KL+ LPE IG L+SL+ L+       ++P S+ +L+KL  L 
Sbjct: 734 IDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKALHADGTAITELPRSIFRLTKLERLV 793

Query: 611 LQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           L+ CK L+ LP     SSI   H  SLK LS
Sbjct: 794 LEGCKHLRRLP-----SSIG--HLCSLKELS 817



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 27/170 (15%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRL 535
           T LP  I  L  L+ L L GC +L+R P      C++++L L ++ +EELP SIG+L+ L
Sbjct: 777 TELPRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPDSIGSLNNL 836

Query: 536 VDLDLTNCSGL-----------------------KSVSSRLCNLKSLRRLNLSGCLKLEK 572
             L+L  C  L                       K + S + +L  LR L++  C  L K
Sbjct: 837 ERLNLMWCESLTVIPDSIGSLISLTQLFFNSTKIKELPSTIGSLYYLRELSVGNCKFLSK 896

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           LP  I  L S+  L L       +P  + ++  L  L + NCK L+ LPE
Sbjct: 897 LPNSIKTLASVVELQLDGTTITDLPDEIGEMKLLRKLEMMNCKNLEYLPE 946



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 27/168 (16%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           +LP  ++ L  L+ L+L GC+ LK  PE   I  +++ L    TAI ELP SI  L++L 
Sbjct: 731 NLPIDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKALHADGTAITELPRSIFRLTKLE 790

Query: 537 DLDLTNCSGLKSVSS---RLCNLK--------------------SLRRLNLSGCLKLEKL 573
            L L  C  L+ + S    LC+LK                    +L RLNL  C  L  +
Sbjct: 791 RLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPDSIGSLNNLERLNLMWCESLTVI 850

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           P+ IG+L SL  L       +++PS++  L  L +L + NCK L  LP
Sbjct: 851 PDSIGSLISLTQLFFNSTKIKELPSTIGSLYYLRELSVGNCKFLSKLP 898



 Score = 40.4 bits (93), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 34/177 (19%)

Query: 458  KDPGKRSRLWHPEDIYQVLNENTSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD 516
            K P +  +L   E +   +N+   LP+ +  L  LK L L  C+ L   P          
Sbjct: 1078 KIPDEFEKLSQLETLKLGMNDFQKLPSSLKGLSILKVLSLPNCTQLISLPS--------- 1128

Query: 517  LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
                    LPSS      L++L++ NC  L+++   + NL+SL+ L L+ C+K+  +P  
Sbjct: 1129 --------LPSS------LIELNVENCYALETIHD-MSNLESLKELKLTNCVKVRDIPGL 1173

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ----SLPELPCGSSI 629
             G L+SL  L L+      +  S +   +LS + L+N + L      LPE   G ++
Sbjct: 1174 EG-LKSLRRLYLS----GCVACSSQIRKRLSKVVLKNLQNLSMPGGKLPEWFSGQTV 1225


>gi|295083303|gb|ADF78105.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 362/740 (48%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 117 --GYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTEVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNNK------ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +       +TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPIVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGLWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSFCYSLESFPKI 722



 Score = 45.4 bits (106), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 38/199 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLQALELRF 759

Query: 543 CS--GLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLES------------- 582
            S   +  V S +  +  L  + + G      LK E+  E+ G++ S             
Sbjct: 760 LSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L + +CK L+ +  +P    
Sbjct: 820 SDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLSNSSTL 646
              A +C SL + S S  L
Sbjct: 880 HFFAINCKSLTSSSISKFL 898


>gi|297800420|ref|XP_002868094.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313930|gb|EFH44353.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1247

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 240/709 (33%), Positives = 343/709 (48%), Gaps = 112/709 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF SF G+DVR  F+SHL  AL  + I TF+D  + R   I+P L SAI  ++ISIV
Sbjct: 12  RYDVFPSFSGEDVRKTFLSHLLKALDGKSINTFMDHGIERSRTIAPELISAIREARISIV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-IF----- 128
           IFS+ YASS WCLNELV+I +      Q+V+PVFY +DPS+      +G  G +F     
Sbjct: 72  IFSKNYASSTWCLNELVEIHKCCKDLDQMVIPVFYYIDPSEVR--KQIGEFGDVFKKTCE 129

Query: 129 DIP-------------------------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
           D P                           E+ ++E  VND+S KL  L P       VG
Sbjct: 130 DKPEDQKQRWVQALTDISNIAGEDLRNGPDEAHMVEKIVNDVSNKL--LPPPKGFGDFVG 187

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM------- 216
           +E  I+EI+S L   S     VGIWG  GIGK+TI  A++S +SS F    F+       
Sbjct: 188 IEDHIEEIKSILCLESKVARMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFVTYKSTSG 247

Query: 217 ----QNIRDESE---KVGGLANI---HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
                 +  E E   K+ G  +I   H     +RL   KVLI+  D+ +L+ +  L+G+ 
Sbjct: 248 DVSGMKLSWEKELLSKILGQKDINMEHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGKT 307

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
           + F PGSR+I+ T+D QLLK H    +  ++EVK  S   +L +  R+AFG++ P     
Sbjct: 308 EWFGPGSRMIVITQDRQLLKAH---DIDLLYEVKLPSQGLALKMLCRSAFGKDSPPDDLK 364

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
           EL+  V K    +PL L +LGS LKG  ++EW   + +L+   + DI K L+VSYD LD 
Sbjct: 365 ELAVEVAKLTGNLPLGLSILGSSLKGRDKDEWMEMMPRLRNGLNGDIMKTLRVSYDRLDK 424

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQ 445
           E+Q++FL  AC F G   + V +  D C+    +G++ LV KSL+ I+    I MH+LL+
Sbjct: 425 EDQDMFLHIACLFNG---FRVSSVDDLCK--DNVGLTTLVDKSLMRITPKGYIEMHNLLE 479

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGI-----------NLDSLKEL 494
           ++G EI R E   +  KR  L + EDI +VL E T   T +            L S+ E 
Sbjct: 480 KLGREIDRAECNGNLRKRRFLTNFEDIEEVLTEKTGTKTAVGIRLYTDYGEKRLLSIDEK 539

Query: 495 YLGGCSNLKRFPEISCNI--------------------EDLDLK---------------- 518
              G  NL+     +C+I                    E+  LK                
Sbjct: 540 SFKGMDNLQYLSVFNCSINIKLPRGLFFLPYKLRLLEWENFPLKSLPSTFKAKYLVELIM 599

Query: 519 -ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
            ++ +E+L      L RL  +++     LK +   L    +L +L+L GC  L  LP  I
Sbjct: 600 VDSKLEKLWEGTQPLGRLKKMNMCGSKYLKEIPD-LSKAINLEKLDLYGCSSLVTLPSSI 658

Query: 578 GNLESLEYLNLAEKDF--EKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            N   L  LN + +     K    M+ L  LS L   N    Q +   P
Sbjct: 659 QNAIKLRKLNCSGELLIDSKPLEGMRNLQYLSVLNWSNMDLPQGIVHFP 707



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 51/86 (59%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS NI+ L L  TAI E+P  I N SRL  L + 
Sbjct: 975  LPTDVNLSSLDILDLSGCSSLRSFPLISWNIKWLYLDNTAIVEVPCCIENFSRLTVLMMY 1034

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++   +  L SL  ++ + C
Sbjct: 1035 CCQSLKNIHPNIFRLTSLMLVDFTDC 1060



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 49/204 (24%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK + L     LK  P++S   N+E+++L   +++  LPSSI N  +L  LD++ C 
Sbjct: 752 LGSLKTMNLSNSKYLKEIPDLSNAINLEEVELSGCSSLVALPSSIQNAIKLNYLDMSECR 811

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-EIGNL----------------------- 580
            L+S  + L NLKSL  L+L+GCL L   P  ++GNL                       
Sbjct: 812 KLESFPTHL-NLKSLEYLDLTGCLNLRNFPAIQMGNLYGFPLDSIFEIEVKDCFWNKNLP 870

Query: 581 ------------------ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                             E L  L++     EK+   ++ L  L  + L  C+ L  +P+
Sbjct: 871 GLNYLDCLMGCMPCKFSPEYLVSLDVRGNKLEKLWEGVQSLGSLEWMNLSECENLTEIPD 930

Query: 623 LPCGSSI---HARHCTSLKTLSNS 643
           L   +++   +   C SL TL ++
Sbjct: 931 LSKATNLKRFYLNGCKSLVTLPST 954



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 87/193 (45%), Gaps = 22/193 (11%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC-NIEDLDLKETAIEELPSSI--GNLSRLVD 537
           S PT +NL SL+ L L GC NL+ FP I   N+    L      E+       NL  L  
Sbjct: 815 SFPTHLNLKSLEYLDLTGCLNLRNFPAIQMGNLYGFPLDSIFEIEVKDCFWNKNLPGLNY 874

Query: 538 LD-LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
           LD L  C   K     L +L    R N     KLEKL E + +L SLE++NL+E ++  +
Sbjct: 875 LDCLMGCMPCKFSPEYLVSLDV--RGN-----KLEKLWEGVQSLGSLEWMNLSECENLTE 927

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSS 651
           IP  + + + L    L  CK L +LP     L     +  + CT L+ L     L     
Sbjct: 928 IP-DLSKATNLKRFYLNGCKSLVTLPSTIENLQNLLGLEMKGCTRLEVLPTDVNL----- 981

Query: 652 KHWDIFNFSNCSN 664
              DI + S CS+
Sbjct: 982 SSLDILDLSGCSS 994



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 24/141 (17%)

Query: 480  TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            T +P      +LK  YL GC +L                      LPS+I NL  L+ L+
Sbjct: 926  TEIPDLSKATNLKRFYLNGCKSLVT--------------------LPSTIENLQNLLGLE 965

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
            +  C+ L+ + + + NL SL  L+LSGC  L   P    N   +++L L      ++P  
Sbjct: 966  MKGCTRLEVLPTDV-NLSSLDILDLSGCSSLRSFPLISWN---IKWLYLDNTAIVEVPCC 1021

Query: 600  MKQLSKLSDLRLQNCKRLQSL 620
            ++  S+L+ L +  C+ L+++
Sbjct: 1022 IENFSRLTVLMMYCCQSLKNI 1042



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 3/115 (2%)

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           +L +  + +E+L      L  L  ++L+N   LK +   L N  +L  + LSGC  L  L
Sbjct: 734 ELIMVNSKLEKLWERNQPLGSLKTMNLSNSKYLKEIPD-LSNAINLEEVELSGCSSLVAL 792

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
           P  I N   L YL+++E +  E  P+ +  L  L  L L  C  L++ P +  G+
Sbjct: 793 PSSIQNAIKLNYLDMSECRKLESFPTHL-NLKSLEYLDLTGCLNLRNFPAIQMGN 846


>gi|295083319|gb|ADF78113.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 362/740 (48%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 117 --GYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGSYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTEVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNNK------ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +       +TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPIVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGLWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSFCYSLESFPKI 722



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 38/194 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLQALELRF 759

Query: 543 CS--GLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLES------------- 582
            S   +  V S +  +  L  + + G      LK E+  E+ G++ S             
Sbjct: 760 LSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L + +CK L+ +  +P    
Sbjct: 820 SDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLS 641
              A +C SL + S
Sbjct: 880 HFFAINCKSLTSSS 893


>gi|325683726|gb|ADZ44604.1| TIR-NBS-LRR type protein [Fragaria x ananassa]
          Length = 630

 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 211/540 (39%), Positives = 301/540 (55%), Gaps = 97/540 (17%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P  K+ VFLSFRG+D R+NF  HL +AL  + I TF+DD+L RG EISP+L  AIE SKI
Sbjct: 9   PTYKYHVFLSFRGEDTRNNFTGHLYSALREKGIFTFMDDQLIRGEEISPALIQAIEQSKI 68

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-------------- 117
           SIV+FS  YASS+WCL+ELVKIL+ K K  QIV+PVF+ VDPSD                
Sbjct: 69  SIVVFSGNYASSKWCLDELVKILDCKKKIQQIVLPVFFKVDPSDVRNHRGSFGEGLANLE 128

Query: 118 -----------------YCPSL-GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                               SL GW    D   SES ++   V  ISK+  +    D  +
Sbjct: 129 RKFKDEDQVQEWKTALFQAASLSGWH--LDEHCSESSIVGKIVEHISKEHVNSTDLDVAE 186

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
             VG++  ++ I++ L     + + VGIWG+GGIGKTTIA A+Y++I   F+GS F++N+
Sbjct: 187 YQVGIQHRVRAIQNLLGVEVRDVHMVGIWGVGGIGKTTIAKAVYNSIVHRFDGSCFLENV 246

Query: 220 RDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQ 258
           R+ S+   GL  +                      +N  + RL   +VL+V  D++D+ Q
Sbjct: 247 RENSKGARGLVELQKILLREILKEREVEVTSVARGINMIKERLQYKRVLLVLDDVSDMNQ 306

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L  +   F  GSR+IITTRD +LL+ H G R   ++EV+EL  +D+L          
Sbjct: 307 LNNLARQCSWFGMGSRIIITTRDRKLLRCH-GVRPDLIYEVQELDEHDAL---------- 355

Query: 319 NHPAAGFLELSNIV------------------IKYANGVPLALQVLGSYLKGMSEEEWES 360
                   EL +++                  ++Y  G+PLAL VLGS L+G S E WE+
Sbjct: 356 --------ELLSVIAFKRIRPLDSYAELTKRAVRYTQGLPLALTVLGSSLRGGSVELWEA 407

Query: 361 AVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
           A++  +     +I+ VLK+S+DGL    +  FLD ACFFKG  +  V+  L AC  S + 
Sbjct: 408 ALDGSES---REIKDVLKISFDGLGHRAKEAFLDIACFFKGEHREHVIKILKACG-SEEH 463

Query: 421 GISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
            I+ L+ K+L+++    KI MHDL++EMG +IV ++S  +PG RSRLW  ED+Y+VL +N
Sbjct: 464 FINVLIEKALISVRYMGKIWMHDLIEEMGRDIVHEQSPDNPGNRSRLWFHEDVYRVLVDN 523


>gi|240256404|ref|NP_199439.5| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
 gi|332007978|gb|AED95361.1| Disease resistance protein (TIR-NBS-LRR class) family protein
           [Arabidopsis thaliana]
          Length = 1139

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 238/720 (33%), Positives = 353/720 (49%), Gaps = 103/720 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG DVR  F SH    L R+ I  F D+++ R + + P L  AI+ S+I++VI
Sbjct: 23  YDVFLSFRGGDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWPDLEQAIKDSRIAVVI 82

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY----------------- 118
           FS+ YASS WCLNEL++I+   +K   IV+PVFY VDPS   +                 
Sbjct: 83  FSKNYASSSWCLNELLEIVNCNDK---IVIPVFYGVDPSQVRHQIGDFGKIFEKTCKRQT 139

Query: 119 ----------CPSLGWMGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                        +  M  FD  T   E+ +IE   ND+  KL    P D ++  VG+E 
Sbjct: 140 EQVKNQWKKALTDVANMLGFDSATWDDEAKMIEEIANDVLAKLLLTTPKDFEN-FVGIED 198

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM---------- 216
            I  +   L   + E   VGIWG  GIGKTTIA A+++ +S HF  S F+          
Sbjct: 199 HIANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRE 258

Query: 217 -----------------QNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
                            + +  E  ++  +   HL     RL   KVLI+  DL D   +
Sbjct: 259 IFSRANPDDHNMKLHLQEKLLSEILRMPDIKIDHLGVLGERLQHQKVLIIVDDLDDQVIL 318

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           D L+G+   F  GSR+I  T +   L+ H    + H++EV   +   +L +  ++AF + 
Sbjct: 319 DSLVGQTQWFGSGSRIIAVTNNKHFLRAH---EIDHIYEVSLPTQQHALAMLCQSAFRKK 375

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  GF  L   V ++ + +PL L VLGSYL+G  +E W   + +L+   H  I+K+L++
Sbjct: 376 SPPEGFEMLVVQVARHVDSLPLGLNVLGSYLRGRDKEYWMEMLPRLENGLHDKIEKILRI 435

Query: 380 SYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           SYDGL  EE + IF   AC F   +   + + L        IG+  LV KS++ +    +
Sbjct: 436 SYDGLGSEEDKAIFRHIACLFNHMEVTTITSLL--TDLGINIGLKNLVDKSIIHVRRGCV 493

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--NTSLPTGINLDS--LKEL 494
            MH +LQEMG +IVR +SI  PGKR  L  P DI  VL+E   T    GI+L++  + EL
Sbjct: 494 EMHRMLQEMGRKIVRTQSIDKPGKREFLVDPNDISDVLSEGIGTQKVLGISLNTGEIDEL 553

Query: 495 YL-----GGCSNLKRFPEISC----NIEDLDLKETAIEELPSSIGNL------------- 532
           Y+      G SNL RF EI          L L E +++ LP  +  L             
Sbjct: 554 YVHESAFKGMSNL-RFLEIDSKNFGKAGRLYLPE-SLDYLPPRLKLLCWPNFPMRCMPSN 611

Query: 533 ---SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
                LV L + N S L  +   + +L  L+ +++ G   L+++P ++    +LE L L 
Sbjct: 612 FRPENLVTLKMPN-SKLHKLWEGVASLTCLKEMDMVGSSNLKEIP-DLSMPTNLEILKLG 669

Query: 590 E-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
             K   ++PSS++ L+KL  L ++ C  L+ LP    L     ++ R+C+ L+T    ST
Sbjct: 670 FCKSLVELPSSIRNLNKLLKLDMEFCHSLEILPTGFNLKSLDHLNFRYCSELRTFPEFST 729



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/90 (47%), Positives = 56/90 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L   GCS L+ FPEIS NI  L+L+ET IEE+P  I N   L  L +
Sbjct: 819 TLPTGINLKSLNYLCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTKLTM 878

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
            +CS LK +S  +  +K+L  ++ S C  L
Sbjct: 879 RSCSKLKCLSLNIPKMKTLWDVDFSDCAAL 908



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 98/215 (45%), Gaps = 42/215 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPTG NL SL  L    CS L+ FPE S NI  L L  T IEE P    NL  LV+L L+
Sbjct: 701 LPTGFNLKSLDHLNFRYCSELRTFPEFSTNISVLMLFGTNIEEFP----NLENLVELSLS 756

Query: 542 -------NCSGLKSVSSRLCNL-KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
                     G+K ++  L  L  +L+ L L     L +LP    NL  L+ L++   ++
Sbjct: 757 KEESDGKQWDGVKPLTPFLEMLSPTLKSLKLENIPSLVELPSSFQNLNQLKELSITYCRN 816

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI----------------------- 629
            E +P+ +  L  L+ L  + C +L+S PE+    S+                       
Sbjct: 817 LETLPTGI-NLKSLNYLCFKGCSQLRSFPEISTNISVLNLEETGIEEVPWQIENFFNLTK 875

Query: 630 -HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
              R C+ LK LS +   + +    WD+ +FS+C+
Sbjct: 876 LTMRSCSKLKCLSLN---IPKMKTLWDV-DFSDCA 906


>gi|295083307|gb|ADF78107.1| Rj2 protein [Glycine max]
 gi|295083315|gb|ADF78111.1| Rj2 protein [Glycine max]
 gi|295083317|gb|ADF78112.1| Rj2 protein [Glycine max]
          Length = 1052

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 261/740 (35%), Positives = 362/740 (48%), Gaps = 137/740 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           + S SSS N      +DVFLSFRG D RH F  +L  AL    I TFIDD+ L  G EI+
Sbjct: 3   LGSCSSSFN------YDVFLSFRGADTRHGFTGNLYKALDDRGIYTFIDDEELQSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P+L  AI+ S+I+I + S  YASS +CL+EL  ILE       +VVPVFY VDPSD    
Sbjct: 57  PALLKAIQESRIAITVLSINYASSSFCLDELAYILECFKSKNLLVVPVFYNVDPSDVRHQ 116

Query: 117 --GYCPSLG---------------W---------MGIFDIPTSESVLIE--GNVNDISKK 148
              Y  +L                W         +  F     E    E  G + ++   
Sbjct: 117 KGTYGEALAKHQERFNHNMEKLEYWKKALHQVANLSGFHFKHGEGYEYEFIGRIVELVSS 176

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW-----GIGGIGKTTIASAIY 203
             +  P    D  VG+ES + E+   L   S +    G++     GIGGIGK+T+A A+Y
Sbjct: 177 KINHAPLPVADYPVGLESRLLEVTKLLDVESDD----GVYMIGIHGIGGIGKSTLAIAVY 232

Query: 204 SNISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSR 243
           + I+ HF+GS F++++R++S K G             G   I+L       +  + RL R
Sbjct: 233 NLIACHFDGSCFLKDLREKSNKKGLQHLQSILLREILGEKEINLASVEQGASIIQHRLQR 292

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            KVL++  D+   +Q+  ++GR   F PGSRVIITTRD QLL +H   R    +EV+ L+
Sbjct: 293 KKVLLILDDVDKHEQLQAIVGRPCWFGPGSRVIITTRDKQLLASHGVKRT---YEVELLN 349

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L L +  +F        + E+ N V+ YA+G+PLAL+V+GS L G S EEW+SA+ 
Sbjct: 350 ENNALQLLTWKSFKTEKVDPSYKEVLNDVVIYASGLPLALEVIGSNLFGKSIEEWKSAIK 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA----CRFSAK 419
           + KR+P + I ++LKVS+D L++E++N+FLD AC F   D   V + L A    C    K
Sbjct: 410 QYKRIPGIQILEILKVSFDALEEEQKNVFLDIACCFNRYDLTEVEDILRAHYGDC---MK 466

Query: 420 IGISRLVGKSLVTISNNK------ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             I  LV KSL+    +       +TMHDL+++MG EIVRQES K+P KRSRLW PEDI 
Sbjct: 467 YHIGVLVEKSLIKKKFSWYGRVPIVTMHDLIEDMGKEIVRQESPKEPEKRSRLWLPEDII 526

Query: 474 QVLNEN--TSLPTGINLD-----------SLKELYLGGCSNLK----------------- 503
            VL +N  TS    I LD            L         NLK                 
Sbjct: 527 HVLEDNRGTSEIEIICLDFPSFDKEEIVVELNTKAFKKMKNLKTLIIRNGKFSKGPKYLP 586

Query: 504 ---------RFPEISCNIEDLDLKETAIEELPSSI-------GNLSRLVDLDLTN---CS 544
                    R+P   C   D   K+ AI +LP S        G     V+L + N   C 
Sbjct: 587 NNLRVLEWWRYPS-HCLPSDFHPKKLAICKLPFSCISSFELDGLWKMFVNLRILNFDRCE 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
           GL  +   +  L +L   +   C  L  +   IG L+ L+ LN    K     P    +L
Sbjct: 646 GLTQIPD-VSGLPNLEEFSFECCFNLITVHNSIGFLDKLKILNAFRCKRLRSFPPI--KL 702

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L  L L  C  L+S P++
Sbjct: 703 TSLEKLNLSFCYSLESFPKI 722



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 38/194 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL++L L  C +L+ FP+I     NI  L L E++I ELP S  NL+ L  L+L  
Sbjct: 700 IKLTSLEKLNLSFCYSLESFPKILGKMENIRQLCLSESSITELPFSFQNLAGLQALELRF 759

Query: 543 CS--GLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLES------------- 582
            S   +  V S +  +  L  + + G      LK E+  E+ G++ S             
Sbjct: 760 LSPHAIFKVPSSIVLMPELTEIFVVGLKGWQWLKQEEGEEKTGSIVSSKVVRLTVAICNL 819

Query: 583 --------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
                         ++ L L+E +F  +P  +K+   L  L + +CK L+ +  +P    
Sbjct: 820 SDEFFSIDFTWFAHMKELCLSENNFTILPECIKECQFLRILDVCDCKHLREIRGIPPNLK 879

Query: 628 SIHARHCTSLKTLS 641
              A +C SL + S
Sbjct: 880 HFFAINCKSLTSSS 893


>gi|225460287|ref|XP_002279207.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1554

 Score =  301 bits (771), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 262/778 (33%), Positives = 382/778 (49%), Gaps = 165/778 (21%)

Query: 2   ASSSSSINMIPHPK-HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           ASS+SS     +P+ +DVFLSFRG D R NF  HL  +L    I TF DD+ L +G +I+
Sbjct: 9   ASSTSS-----NPRSYDVFLSFRGDDTRKNFTDHLYTSLVTRGIHTFRDDEELEKGGDIA 63

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GY 118
             LS AIE S+I I+IFS+ YA SRWCLNEL+KI++   +   +VVP+FY V PSD    
Sbjct: 64  ADLSRAIEESRIFIIIFSKNYAYSRWCLNELLKIIDCVTQKESMVVPIFYHVPPSDVRNQ 123

Query: 119 CPSLGWMGIF---DIPTSESVLIE---------GNVND---------------ISKKLSD 151
             S  +   F   D    +  ++E          N++                I K L  
Sbjct: 124 SGSFDYAFTFHEKDADQKKKEMVEKWRTALTKAANISGWHVENQYESEVIGQIIEKILQK 183

Query: 152 LFPSD--NKDQLVGVESIIKEIESQLLSGSTEFNTV---GIWGIGGIGKTTIASAIYSNI 206
           L P+       +VG++  ++++++ +   + E N V   GI+GIGGIGKTTIA AIY+ I
Sbjct: 184 LGPTHLYVGKNIVGMDYHLEQLKALI---NIELNDVCIIGIYGIGGIGKTTIAKAIYNEI 240

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIHLNFE----------------------RRRLSRM 244
           S  FEGS F+ ++R++S+   GL  +                           R +L   
Sbjct: 241 SCKFEGSSFLADVREQSKDNAGLLRLQNQLLDDTLAGTYKKKSSSIYGATHEIRDKLRLK 300

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           +VL++  D+   +Q+D L G  + F  GSR+IITTR   L+     ++    +E ++L+ 
Sbjct: 301 RVLVILDDVDGRRQLDYLAGECEWFGSGSRIIITTRHKDLVAIDGANK---SYEPRKLND 357

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL---KGMSEEEWESA 361
            +++ LFS  AF QN P   +  L    +KYA G+PLAL VLGS L   +G+   EWES 
Sbjct: 358 EEAIKLFSLYAFKQNVPRENYKNLCENAVKYAQGLPLALAVLGSTLSSKRGI--REWESE 415

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
           + KL++ P+ +I  VL+ S+DGL   E  IFLD ACFFKG D+  V   LD     A+  
Sbjct: 416 LRKLEKEPNREIYNVLRTSFDGLSRVEGEIFLDIACFFKGKDRDFVSRILD----DAEGE 471

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT- 480
           IS L  + L+TI +NKI MHDL+Q+MG E+VR++   +PG++SRLW  +D+  VL  N  
Sbjct: 472 ISNLCERCLITILDNKIYMHDLIQQMGWEVVREKCQNEPGEQSRLWDLDDVSSVLTRNAG 531

Query: 481 -------------------SLPTGINLDSLKELYLGGCSNLKRFPEISCNI--------E 513
                              +  T   ++ L+ L +   +      EI  ++        E
Sbjct: 532 TKAIEGLFMDMSAQQEIQFTTETFTKMNKLRLLKIHQDAKYDHIKEIDGDVHFPQVALPE 591

Query: 514 DLDLKE----------TAIEELPSSIGNLSRLVDLDLTNCSGLKSV-------------- 549
           DL L             +++ LP +  +   LV+L+L  CS +K +              
Sbjct: 592 DLKLPSFELRYLHWDGYSLKYLPPNF-HPKNLVELNL-RCSNIKQLWEGNKVLKKLKVIN 649

Query: 550 ---SSRLCNLKS------LRRLNLSGCLKLEKLPEEIGNLESLEYL-------------- 586
              S RL    S      L  L L GC+ L++LP +I  L+ L+ L              
Sbjct: 650 LNHSQRLMEFPSFSMMPNLEILTLEGCISLKRLPMDIDRLQHLQTLSCHDCSKLEYFPEI 709

Query: 587 -----NLAEKDF-----EKIP-SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH 633
                NL + D      EK+P SS++ L  L  L L +CK L  LPE  C SS+   H
Sbjct: 710 KYTMKNLKKLDLYGTAIEKLPSSSIEHLEGLEYLNLAHCKNLVILPENICLSSLRVLH 767



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 78/135 (57%), Gaps = 9/135 (6%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
            SLP+ I  L SL      GCS L+ FPEI+ +++   +L L  T+++ELPSSI +L  L 
Sbjct: 1104 SLPSDIYKLKSLTTFSCSGCSKLQSFPEITEDMKILRELRLDGTSLKELPSSIQHLQGLK 1163

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             LDL NC  L ++   +CNL+SL  L +SGC KL KLP+ +G+L  L  L  A  D    
Sbjct: 1164 YLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLRLLCAARLD---- 1219

Query: 597  PSSMKQLSKLSDLRL 611
             S   QL   SDLR 
Sbjct: 1220 -SMSCQLPSFSDLRF 1233



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 97/213 (45%), Gaps = 54/213 (25%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSS-IGNLSRLV 536
           LP  I+ L  L+ L    CS L+ FPEI     N++ LDL  TAIE+LPSS I +L  L 
Sbjct: 682 LPMDIDRLQHLQTLSCHDCSKLEYFPEIKYTMKNLKKLDLYGTAIEKLPSSSIEHLEGLE 741

Query: 537 DLDLTNCSGLKSVSSRLC------------------------------------------ 554
            L+L +C  L  +   +C                                          
Sbjct: 742 YLNLAHCKNLVILPENICLSSLRVLHLNGSCITPRVIRSHEFLSLLEELSLSDCEVMEGA 801

Query: 555 -----NLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
                +L SL+ L+LS C L  E +P++I  L SL+ L+L+  +  K+P+S+  LSKL  
Sbjct: 802 LDHIFHLSSLKELDLSNCYLMKEGIPDDIYRLSSLQALDLSGTNIHKMPASIHHLSKLKF 861

Query: 609 LRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           L L +CK+LQ   +LP        H  S K+LS
Sbjct: 862 LWLGHCKQLQGSLKLPSSVRFLDGH-DSFKSLS 893



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 513  EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            E L L ETAI EL  +I  LS + +L L NC  L+S+ S +  LKSL   + SGC KL+ 
Sbjct: 1070 EKLCLGETAINEL-LNIECLSGIQNLCLRNCKRLESLPSDIYKLKSLTTFSCSGCSKLQS 1128

Query: 573  LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             PE   +++ L  L L     +++PSS++ L  L  L L+NCK L ++P+  C
Sbjct: 1129 FPEITEDMKILRELRLDGTSLKELPSSIQHLQGLKYLDLENCKNLLNIPDNIC 1181



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 31/174 (17%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDL----KETAIEELPSSIGNLSRL- 535
            LP+ I +L  LK L L  C NL   P+  CN+  L+       + + +LP ++G+L++L 
Sbjct: 1152 LPSSIQHLQGLKYLDLENCKNLLNIPDNICNLRSLETLIVSGCSKLNKLPKNLGSLTQLR 1211

Query: 536  ----VDLDLTNC-----SGLK---------------SVSSRLCNLKSLRRLNLSGC-LKL 570
                  LD  +C     S L+               ++ S +  L SL  ++LS C L  
Sbjct: 1212 LLCAARLDSMSCQLPSFSDLRFLKILNLDRSNLVHGAIRSDISILYSLEEVDLSYCNLAE 1271

Query: 571  EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
              +P EI  L SL+ L L    F  IPS + QLSKL  L L +C+ LQ +PELP
Sbjct: 1272 GGIPSEICYLSSLQALYLKGNHFSSIPSGIGQLSKLKILDLSHCEMLQQIPELP 1325


>gi|227438225|gb|ACP30602.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 938

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 218/685 (31%), Positives = 346/685 (50%), Gaps = 81/685 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VFLSFRG+DVR  F+SH+      + I  FID+++ RG  + P L  AI  S++++V+
Sbjct: 17  YHVFLSFRGEDVRKGFLSHVLKEFKSKGINVFIDNEIKRGQSVGPELVKAIRHSRVAVVL 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------GYC 119
            S  YASS WCL+ELV+I++ + + GQ V+ +FY VDPS+                 G  
Sbjct: 77  LSRNYASSSWCLDELVEIMKCREEVGQTVLTIFYNVDPSEVRKQTGDFGKAFDETCVGKT 136

Query: 120 PSL--GW-------MGIFDIPTS----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
             +   W        GI    +S    E+ LI    +D+   L    PS++ D  VG+ +
Sbjct: 137 EEVKKAWRQALNDVAGIAGYHSSNCGNEADLINKVASDVMAVLG-FTPSNDFDDFVGMGA 195

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            + EI+S+++  S     +GI+G  GIGKTT A  +Y+ +S  F  S F+++IR   EK 
Sbjct: 196 RVTEIKSKIILQSELVKVIGIFGPAGIGKTTTARVLYNQLSHAFPFSTFLEDIRGSYEKP 255

Query: 227 GG-------------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
            G             L  I         HL   +  LS  KVL+V  ++ +  Q++ +  
Sbjct: 256 CGNDYRLKLRLQKNLLCQIFNQSDIEVRHLRGAQEMLSDKKVLVVLDEVDNWWQLEEMAK 315

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           +     PGS +IITT D +LLK   G    H++++   + ++SL +F + AFGQ  P  G
Sbjct: 316 QPGWVGPGSMIIITTEDRKLLKA-LGLGSDHIYKMNFPTEDESLQIFCQYAFGQKSPDDG 374

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F  L+  V      +PL L+V+GSYL+GMS++EW  A+  L+     +I+  L+ SYD L
Sbjct: 375 FESLAREVTWLVGDLPLGLRVMGSYLRGMSKDEWIEALPWLRSTLDREIESTLRFSYDAL 434

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN--KITMHD 442
            D E+ +FL  AC F G     + ++          G+  L  KSL+TI +   ++ MH 
Sbjct: 435 RDNEKTLFLHVACLFGGFYASSIKSYFANSSLEVNHGLEVLAQKSLITIDHKHERVHMHI 494

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GIN------------- 487
           LLQ+MG EIV+++  ++PGKR  LW  +DI  VL+E+T+     GIN             
Sbjct: 495 LLQQMGREIVKKQCTENPGKRQFLWDTKDISHVLDEDTATGNVLGINTTWTGEEIQINKS 554

Query: 488 ----LDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSRLVDLDL 540
               +++L+ L L   S +     + C  + L L     + +   PS+      LV+L +
Sbjct: 555 AFQGMNNLQFLLLFSYSTIHTPEGLDCLPDKLILLHWDRSPLRIWPSTFSGKC-LVELRM 613

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSS 599
            N S  + +   +  L  LR L+LS    L+K+P ++    SLE L L + +   ++ SS
Sbjct: 614 QN-SKFEMLWEGIKPLSCLRTLDLSSSWDLKKIP-DLSKATSLEVLQLGDCRSLLELTSS 671

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELP 624
           +   +KL  L +  C +++  P +P
Sbjct: 672 ISSATKLCYLNISRCTKIKDFPNVP 696



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 23/124 (18%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  L+ L L    +LK+ P++S   ++E L L +  ++ EL SSI + ++L  L+++ C+
Sbjct: 628 LSCLRTLDLSSSWDLKKIPDLSKATSLEVLQLGDCRSLLELTSSISSATKLCYLNISRCT 687

Query: 545 --------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
                               G+K V   + NL  LR+L ++GC KL+ +   I  LE+LE
Sbjct: 688 KIKDFPNVPDSIDVLVLSHTGIKDVPPWIENLFRLRKLIMNGCKKLKTISPNISKLENLE 747

Query: 585 YLNL 588
           +L L
Sbjct: 748 FLAL 751


>gi|357458903|ref|XP_003599732.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|357474669|ref|XP_003607619.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355488780|gb|AES69983.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355508674|gb|AES89816.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1058

 Score =  301 bits (770), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 231/707 (32%), Positives = 358/707 (50%), Gaps = 124/707 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF+SFRGKD R NF  HL A              L +G  I+P L  AIE S+I +V+
Sbjct: 30  YDVFVSFRGKDTRLNFTDHLFA--------------LKKGESIAPELLRAIEDSQIFVVV 75

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL------------- 122
           FS+ YASS WCL EL  IL+S    G+ V+PVFY VDPS+  Y                 
Sbjct: 76  FSKNYASSVWCLRELECILQSFQLSGKRVLPVFYDVDPSEVRYQKGCYAEALAKHEERFQ 135

Query: 123 --------------------GWMGIFDIPTSE-SVLIEGNVNDISKKLSDLFPSDNKDQL 161
                               GW   +    +E   ++E  VN +  K S+L P +    L
Sbjct: 136 QNFEIVQRWREALTQVANLSGWDVRYKPQHAEIEKIVEEIVNMLGYKFSNL-PKN----L 190

Query: 162 VGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHF---------- 210
           VG+ S + E+E  LL  S +    VGI G+GG+GKTT+A+ +Y+ IS  F          
Sbjct: 191 VGMHSPLHELEKHLLLDSLDDVRVVGICGMGGVGKTTLATILYNKISHQFPVFCLIDDLS 250

Query: 211 -----------EGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
                      +     Q + +E  +   + N   N  + RL  +K LI+  ++  ++Q+
Sbjct: 251 KIYRDDGLIGAQKLILHQTLVEEQLQTCNIYNAS-NLIQSRLHCVKALIILDNVDQVEQL 309

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           + L    +    GSR+II +RD  +LK +    V  V++V  L+  DSL LFSR AF  +
Sbjct: 310 EKLAVNREWLGAGSRIIIISRDEHILKEYG---VDVVYKVPLLNRTDSLQLFSRKAFKLD 366

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           H  + + +L++ +++YANG+PLA++VLGS+L   +  EW+SA+ +L+  P+ DI  VL++
Sbjct: 367 HIMSSYDKLASEILRYANGLPLAIKVLGSFLYDRNIFEWKSALARLRESPNKDIMDVLRL 426

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKI 438
           S+DGL++ E+ IFL  ACFFKG ++  V N L+ C F A IG+  L+ KS+++IS  N I
Sbjct: 427 SFDGLEEMEKEIFLHIACFFKGGEEKYVKNVLNCCGFHADIGLRVLIDKSVISISTENNI 486

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG------------- 485
            +H LLQE+G +IV+++SIK+  K SR+W  +  Y V++EN     G             
Sbjct: 487 EIHRLLQELGRKIVQEKSIKESRKWSRMWLHKQFYNVMSENMEKKVGAIVFVRDKKERKI 546

Query: 486 -INLDSLKELY---------------LGGCSNLKRFPE-------------ISCNIEDLD 516
            I  ++L ++                L G S+  R+ E             +   + +L 
Sbjct: 547 FIMAETLSKMIHLRLLILKGVTLTGNLNGLSDELRYVEWNRYPFKYLPSSFLPNQLVELI 606

Query: 517 LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
           L+ +++++L      L  L  LDL++   L+ + +    + +L R++  GC+KL ++   
Sbjct: 607 LRYSSVKQLWKDKKYLPNLRTLDLSHSKSLRKMPN-FGEVPNLERVSFEGCVKLVQMGPS 665

Query: 577 IGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           IG L  L YLNL + K    IP ++  LS L  L L  C ++   P 
Sbjct: 666 IGVLRKLVYLNLKDCKKLIIIPKNIFGLSSLECLNLSGCSKVFKNPR 712



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
           + +LP  IG L  LE LNL   +F  +PS +++LS+L+ L LQ+CK L+SLP+LP  ++I
Sbjct: 776 ISQLPNAIGRLRWLERLNLGGNNFVTVPS-LRKLSRLAYLNLQHCKLLKSLPQLPFATAI 834

Query: 630 -HARHCTSL 637
            H  H  +L
Sbjct: 835 EHDLHINNL 843



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 3/93 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L +L+ L L    +L++ P      N+E +  +    + ++  SIG L +LV L+L +C 
Sbjct: 622 LPNLRTLDLSHSKSLRKMPNFGEVPNLERVSFEGCVKLVQMGPSIGVLRKLVYLNLKDCK 681

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
            L  +   +  L SL  LNLSGC K+ K P ++
Sbjct: 682 KLIIIPKNIFGLSSLECLNLSGCSKVFKNPRQL 714


>gi|449526134|ref|XP_004170069.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like
           [Cucumis sativus]
          Length = 1195

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 245/742 (33%), Positives = 366/742 (49%), Gaps = 125/742 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R  F+SHL+ AL RE +  FIDDKL+RG +IS SL  +IEGS+ISI+I
Sbjct: 23  YDVFLSFRGEDTRDKFISHLDLALRREGVNFFIDDKLDRGKQISKSLLKSIEGSRISIII 82

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFD------ 129
           FS+ YASS WCL+E+VKI+E      Q V+PVFY V PS+      +   GIF       
Sbjct: 83  FSQNYASSTWCLDEVVKIIECMRSKKQTVLPVFYNVSPSEV-----VKQTGIFGEAFAKY 137

Query: 130 ----------IPTSESVLIEGN-----------------VNDISKKLSDLFPS---DNKD 159
                      P  E++                      + D+ KK+S L  +   +   
Sbjct: 138 ETNPLMTNKIQPWKEALTTAATLSGWDLGNYWKNNEAHLIQDLVKKVSILKQTQLLNVAK 197

Query: 160 QLVGVESIIKEIESQLLSGSTE--FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
             V ++S +K IE     G ++   N VGI G+GGIGKTT+A A+Y+ I+  FE   F+ 
Sbjct: 198 HPVAIDSQLKAIEELASHGVSDNGVNMVGIHGMGGIGKTTLAKALYNKITYQFEACCFLS 257

Query: 218 NIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDL 256
           N+R+ SE+  GL  +                      +N  + RL   KVL+V  D+   
Sbjct: 258 NVRETSEQFNGLVQLQEKLLNEIFKDNNLKVDNVDKGMNIIKDRLCSRKVLMVLDDVDKD 317

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q+D L+G  D F  GS++I+TTRD  LL+ +   ++     ++ L  + SL LF  +AF
Sbjct: 318 DQLDALVGGRDXFGRGSKIIVTTRDRHLLETYSFDKIH---PIQLLDCDKSLELFCWHAF 374

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
            Q+HP+  + EL  +V +Y NG+PLAL +LGS L    +  W+S +++LK  P   I+ V
Sbjct: 375 KQSHPSRNYSELPELV-RYCNGLPLALVILGSLLCKRDQIIWKSKLDELKNFPEPGIEAV 433

Query: 377 LKVSYDGLDDEE--QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            ++S+  L +    + IFLD  CFF G D     N L AC    +  I  L+  SLVT+ 
Sbjct: 434 FQISFKRLPENPPVKEIFLDICCFFVGEDVSYSKNVLKACDPYLESRIIILMDLSLVTVE 493

Query: 435 NNKITMHDLLQEMGGEIVR---------------QESIKDPGKRSRLWHPEDIYQVLNEN 479
           + KI MHDL+++MG  IVR               +E++K   ++S     + I   L  N
Sbjct: 494 DGKIQMHDLIRQMGQMIVRRKSFKXRKRSRLWVAKEAVKMLIEKSGTHKVKAIKLDLRNN 553

Query: 480 TSLPTGI----NLDSLKELYLGGCSNL-----KRFPEISCNIEDLDLKETAIE-ELPSSI 529
            SL        N+++L+ L L   + L     K  P    NI+ ++   +++    P S 
Sbjct: 554 GSLIVEAEAFRNMENLRLLILQNAAKLPTNIFKYLP----NIKWIEYSSSSVRWYFPISF 609

Query: 530 ---GNLSRLVDLDLTN---------CSGLKSVSSRLCNL----------KSLRRLNLSGC 567
              G L  LV   ++N         C  LK V      L           +L +L L  C
Sbjct: 610 VVNGGLVGLVINGVSNKHPGIIFEDCKMLKHVDLSYWRLLEETPDFSAALNLEKLYLLSC 669

Query: 568 LKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
            +L+ +   + +L  L  L+L   ++ EK+PSS   L  L  L L  C +L+ +P+L   
Sbjct: 670 KRLKMIHGSVASLSKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIPDLSAS 729

Query: 627 SS---IHARHCTSLKTLSNSST 645
           S+   +H R C  L+ + +S+ 
Sbjct: 730 SNLKELHLRECYHLRIIHDSAV 751



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 91/194 (46%), Gaps = 32/194 (16%)

Query: 484 TGINLDSLKELYLGGCSNLKRFP--------------------------EISCNIEDLDL 517
            G  LD L  L L GC  L+R P                           I+ N+E  DL
Sbjct: 751 VGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSIASNLEIFDL 810

Query: 518 KET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
           +   ++  +  S+G+L +L+ L L  C  L+ + S L  LKSL  L+L+ C K+E+LPE 
Sbjct: 811 RGCFSLRTIHKSVGSLDQLIALKLDFCHQLEELPSCL-RLKSLDSLSLTNCYKIEQLPEF 869

Query: 577 IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHAR 632
             N++SL  +NL      K+P+S++ L  L +L L  C  L SLP     L     +  R
Sbjct: 870 DENMKSLREMNLKGTAIRKLPTSIRYLIGLENLILSYCTNLISLPSEIHLLKSLKELDLR 929

Query: 633 HCTSLKTLSNSSTL 646
            C+ L  L + S+L
Sbjct: 930 ECSRLDMLPSGSSL 943



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 38/193 (19%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            LP+ + L SL  L L  C  +++ PE   N++   +++LK TAI +LP+SI  L  L +L
Sbjct: 843  LPSCLRLKSLDSLSLTNCYKIEQLPEFDENMKSLREMNLKGTAIRKLPTSIRYLIGLENL 902

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP------------------------ 574
             L+ C+ L S+ S +  LKSL+ L+L  C +L+ LP                        
Sbjct: 903  ILSYCTNLISLPSEIHLLKSLKELDLRECSRLDMLPSGSSLNFPQRSLCSNLTILDLQNC 962

Query: 575  --------EEIGNL-ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP- 624
                    E + N   +L+ LNL+   F  +P S+K  + L  L L+NCK L+++ ++P 
Sbjct: 963  NISNSDFLENLSNFCTTLKELNLSGNKFCCLP-SLKNFTSLRLLELRNCKFLRNIVKIPH 1021

Query: 625  CGSSIHARHCTSL 637
            C   + A  C  L
Sbjct: 1022 CLKRMDASGCELL 1034



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 36/197 (18%)

Query: 473 YQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL 532
           +++L E       +NL+   +LYL  C  LK                     +  S+ +L
Sbjct: 646 WRLLEETPDFSAALNLE---KLYLLSCKRLKM--------------------IHGSVASL 682

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
           S+LV LDL  C  L+ + S    LKSL  LNLSGC+KL+++P ++    +L+ L+L E  
Sbjct: 683 SKLVTLDLEGCENLEKLPSSFLMLKSLEVLNLSGCIKLKEIP-DLSASSNLKELHLRECY 741

Query: 593 FEKI---PSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSST 645
             +I    +  + L KL  L L+ CK L+ LP    +      ++  +C +LK +++ S 
Sbjct: 742 HLRIIHDSAVGRFLDKLVILDLEGCKILERLPTSHLKFESLKVLNLSYCQNLKEITDFSI 801

Query: 646 LLTRSSKHWDIFNFSNC 662
                + + +IF+   C
Sbjct: 802 -----ASNLEIFDLRGC 813


>gi|215261577|gb|ACJ64857.1| disease resistance protein RPP1-like protein R3 [Arabidopsis
           thaliana]
          Length = 1193

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 236/726 (32%), Positives = 355/726 (48%), Gaps = 109/726 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 40  KHDVFPSFHGADVRRTFLSHILESFKRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 99

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---------AGYCPSLG-- 123
           + S  YASS WCL+EL +I++ +   GQIV+ +FY VDP+D           +  +    
Sbjct: 100 LLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGK 159

Query: 124 -------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 160 LKEQVERWRKALEDVATIAGEHSRNWRNEADMIEKISTDVSNMLNSFTPSRDFDGLVGMR 219

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  +++ +S  F+ S  M NI+     
Sbjct: 220 AHMDRMEHLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPR 279

Query: 221 ---DESEKVGGLAN--------------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 280 PCFDEYSAQLQLQNEMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 339

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
             +  F  GSR+IITT D+ +LK H    + HV++V+  S +++  +F  NAFGQ HP  
Sbjct: 340 KEIQWFGLGSRIIITTEDLGVLKAHG---INHVYKVEYPSNDEAFQIFCMNAFGQKHPND 396

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V   A  +PL L+VLGS L+GMS+ EWE  + +L+      I  +++ SYD 
Sbjct: 397 GFDEIAREVTYLAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFSYDA 456

Query: 384 LDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           L DE++ +FL  AC F        + L+  FLD      + G+  L  KSL++     I 
Sbjct: 457 LCDEDKYLFLYIACLFNKESTTKVEGLLGKFLD-----VRQGLHILAQKSLISFYGETIR 511

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENTS---LPTGINLDSLKELY 495
           MH LL++ G E   ++ +    ++ +L   E DI +VL+++T+      GINLD  +E  
Sbjct: 512 MHTLLEQFGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTTDNRRFIGINLDLREEEL 571

Query: 496 LGGCSNLKRF----------------------PE-ISCNIEDLDLKETAIEE-------- 524
                 L+R                       PE +   +EDL      I          
Sbjct: 572 KINEKTLERINDFQFVKINLRQKLLHFKIIRQPERVQLALEDLIYHSPRIRSLKWFGYQN 631

Query: 525 --LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--EEIGNL 580
             LPS+  N   LV+LD+   S L+ +      L++L+ ++LS  + L++LP      NL
Sbjct: 632 ICLPSTF-NPEFLVELDM-RYSKLQKLWEGTKQLRNLKWMDLSYSIDLQELPNLSTATNL 689

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR---HCTSL 637
           E L+  N +     ++PSS+++L+ L  L LQ C  L  LP     + +      +C+SL
Sbjct: 690 EELKLRNCS--SLVELPSSIEKLTSLQRLDLQGCSSLVELPSFGNATKLKKLDLGNCSSL 747

Query: 638 KTLSNS 643
             L  S
Sbjct: 748 VKLPPS 753



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 83/161 (51%), Gaps = 29/161 (18%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT INL SL+ L L  CS LK FPEIS +I+ L L  TAI+E+P SI + SRL    +
Sbjct: 867 TLPTNINLISLRILDLTDCSRLKSFPEISTHIDSLYLIGTAIKEVPLSIMSWSRLAVYKM 926

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +                             E L E    L+ +  L L+ KD +++P  +
Sbjct: 927 S---------------------------YFESLNEFPHALDIITELQLS-KDIQEVPPWV 958

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
           K++S+L  LRL NC  L SLP+L      I+A +C SL+ L
Sbjct: 959 KRMSRLRVLRLNNCNNLVSLPQLSDSLDYIYADNCKSLERL 999



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 28/146 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP   N   L+EL L  CS+L   P     + N+  LD+   +++ +LPSSIG+++ L  
Sbjct: 773 LPAIENATKLRELKLQNCSSLIELPLSIGTANNLWKLDISGCSSLVKLPSSIGDMTSLEG 832

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            DL+NCS L  + S + NL+ L  L + GC KLE LP  I NL SL  L+L         
Sbjct: 833 FDLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNI-NLISLRILDLT-------- 883

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPEL 623
                          +C RL+S PE+
Sbjct: 884 ---------------DCSRLKSFPEI 894



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 16/191 (8%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP+ I  L SL+ L L GCS+L   P    +  ++ LDL   +++ +LP SI N + L +
Sbjct: 703 LPSSIEKLTSLQRLDLQGCSSLVELPSFGNATKLKKLDLGNCSSLVKLPPSI-NANNLQE 761

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
           L L NCS +  + + + N   LR L L  C  L +LP  IG   +L  L+++      K+
Sbjct: 762 LSLINCSRVVKLPA-IENATKLRELKLQNCSSLIELPLSIGTANNLWKLDISGCSSLVKL 820

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
           PSS+  ++ L    L NC  L  LP     L   + +  R C+ L+TL  +  L++    
Sbjct: 821 PSSIGDMTSLEGFDLSNCSNLVELPSSIGNLRKLTLLLMRGCSKLETLPTNINLISLR-- 878

Query: 653 HWDIFNFSNCS 663
              I + ++CS
Sbjct: 879 ---ILDLTDCS 886



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 32/215 (14%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA----IEELPSSIGNLS 533
           +N  LP+  N + L EL +   S L++  E +  + +L   + +    ++ELP+ +   +
Sbjct: 630 QNICLPSTFNPEFLVELDMRY-SKLQKLWEGTKQLRNLKWMDLSYSIDLQELPN-LSTAT 687

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
            L +L L NCS L  + S +  L SL+RL+L GC  L +LP   GN   L+ L+L     
Sbjct: 688 NLEELKLRNCSSLVELPSSIEKLTSLQRLDLQGCSSLVELP-SFGNATKLKKLDLGNCSS 746

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTL--------- 640
             K+P S+   + L +L L NC R+  LP +   + +     ++C+SL  L         
Sbjct: 747 LVKLPPSINA-NNLQELSLINCSRVVKLPAIENATKLRELKLQNCSSLIELPLSIGTANN 805

Query: 641 ------SNSSTLLTRSSKHWDI-----FNFSNCSN 664
                 S  S+L+   S   D+     F+ SNCSN
Sbjct: 806 LWKLDISGCSSLVKLPSSIGDMTSLEGFDLSNCSN 840


>gi|332330346|gb|AEE43932.1| TIR-NBS-LRR resistance protein muRdr1H [Rosa multiflora]
          Length = 1122

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 251/718 (34%), Positives = 372/718 (51%), Gaps = 89/718 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F   L   L R+ I TF DD +L RG  ISP L +AIE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTGFLYHELQRQGIRTFRDDPQLERGTVISPELLTAIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  +ASS WCL EL KILE   + G+I+ P+FY VDPS                   
Sbjct: 78  VVLSPNFASSTWCLLELSKILECMEERGRIL-PIFYEVDPSHVRHQRGSFAEAFQEHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDLFPS----DNKDQL 161
                    G+  +L  +      TS+    E   + +I + L S L PS     + ++L
Sbjct: 137 FGVGNKKVEGWRDALTKVAGLAGWTSKDYRYETELIREIVQALWSKLHPSLTVFGSSEKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
            G++S ++EI+  L   + E   +GIWG+GGIGKTT+A  +Y  IS  FE   F+ N+R+
Sbjct: 197 FGMDSKLEEIDVLLDKEANEVRFIGIWGMGGIGKTTLARLVYQKISHQFEVCIFLDNVRE 256

Query: 222 ESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
            S+   GL ++                      +   +R +    VL+V  D+   +Q++
Sbjct: 257 VSKTTHGLVDLQKKILSQIFKEENVQVLDVYSGMTMIKRCVCNKAVLLVLDDMDQSEQLE 316

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G  D F   SR+IITTRD  +L  H    V   +E+  L+ N++L LFS  AF +  
Sbjct: 317 NLVGEKDCFGLRSRIIITTRDRHVLVTHG---VEKPYELNGLNKNEALQLFSWKAFRKCE 373

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   F EL    + YA G+PLAL++LGS+LKG + +EW SA+ KL++ P + + K+LK+S
Sbjct: 374 PEEDFAELCKSFVTYAGGLPLALKILGSFLKGRTPDEWNSALAKLQQTPDITVFKILKMS 433

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
           +DGLD+ E+ IFLD ACF     +  ++  +D+     +I  S L  KSL+TI S+N++ 
Sbjct: 434 FDGLDEMEKKIFLDIACFRWLYRKEFMIELVDSSDPCNRITRSVLAEKSLLTISSDNQVH 493

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLKELYLG 497
           +HDL+ EMG EIVRQE+ K+PG RSRL   +DI+ V  +NT      GI LD L EL   
Sbjct: 494 VHDLIHEMGCEIVRQEN-KEPGGRSRLCLRDDIFHVFTKNTGTEAIEGILLD-LAELEEA 551

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL---------------DLTN 542
              NL+ F ++ C ++ L +    +   P  + N  R +                 +L  
Sbjct: 552 DW-NLEAFSKM-CKLKLLYIHNLRLSVGPRLLPNSLRFLSWSWYPSKSLPPCFQPDELAE 609

Query: 543 CSGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIP 597
            S + S    L N    L +L+ ++LS  + L + P+  G + +LE L L    +  KI 
Sbjct: 610 ISLVHSNIDHLWNGIKYLVNLKSIDLSYSINLTRTPDFTG-IPNLEKLVLEGCTNLVKIH 668

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
            S+  L +L    L+NCK ++SLP    +    +     C+ LK +S     + R SK
Sbjct: 669 PSIALLKRLRIWNLRNCKSIRSLPSEVNMEFLETFDVSGCSKLKMISEFVMQMKRLSK 726



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 50/244 (20%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LK 518
           KR R+W+  +   +     SLP+ +N++ L+   + GCS LK   E    ++ L    L 
Sbjct: 675 KRLRIWNLRNCKSI----RSLPSEVNMEFLETFDVSGCSKLKMISEFVMQMKRLSKLYLG 730

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNCSGLKSVSSRLC----------------------- 554
            TA+E+LPSSI +LS  LV LDL+     +   SRL                        
Sbjct: 731 GTAVEKLPSSIEHLSESLVVLDLSGIVIREQPYSRLLKQNLIASSFGLFPRKSPHPLIPL 790

Query: 555 -----NLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
                +   LR L L+ C   E ++P +IG+L SL+ L L   +F  +P+S+     L D
Sbjct: 791 LASLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLQRLELRGNNFVSLPASIHL---LED 847

Query: 609 LRLQNCKRLQSLPELP---------CGSSIHARHCTSLKTLSNSSTLLTRSSKHW-DIFN 658
           + ++NCKRLQ LPELP             ++  +C S+    ++S  L    K W +I  
Sbjct: 848 VDVENCKRLQQLPELPDLPNLCRLRANFWLNCINCLSMVGNQDASYFLYSVLKRWIEIEA 907

Query: 659 FSNC 662
            S C
Sbjct: 908 LSRC 911



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 4/121 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK + L    NL R P+ +   N+E L L+  T + ++  SI  L RL   +L NC 
Sbjct: 627 LVNLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLKRLRIWNLRNCK 686

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            ++S+ S + N++ L   ++SGC KL+ + E +  ++ L  L L     EK+PSS++ LS
Sbjct: 687 SIRSLPSEV-NMEFLETFDVSGCSKLKMISEFVMQMKRLSKLYLGGTAVEKLPSSIEHLS 745

Query: 605 K 605
           +
Sbjct: 746 E 746


>gi|356559294|ref|XP_003547935.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1075

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 259/759 (34%), Positives = 378/759 (49%), Gaps = 153/759 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F  HL  AL  + I TFIDD +L RG EI+P+L  AI+ S+++I 
Sbjct: 14  YDVFLSFRGEDTRLGFTGHLYKALHDKGIRTFIDDAELQRGEEITPALMKAIQDSRVAIT 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           + SE YASS +CL+EL  IL+ + +   +V+PVFY VDPSD       Y  +L       
Sbjct: 74  VLSEDYASSSFCLDELATILDQRKRL--MVIPVFYKVDPSDVRNQRGSYEDALAKLEGKF 131

Query: 124 ---------W-MGIFDIPT-----------SESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                    W M +  +              E   IE  V  +S  +S L P    D  V
Sbjct: 132 QHDPEKLQKWKMALKQVANLSGYHFKEGDGYEFEFIEKIVEQVSGVIS-LGPLHVADYPV 190

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN--ISSHFEGSYFMQNI 219
           G+ES +  + S L +GS +  + +GI G+GGIGK+T+A A+Y+   I+  F+G  F+ N+
Sbjct: 191 GLESRVLHVRSLLDAGSDDGVHMIGIHGMGGIGKSTLARAVYNELIIAEKFDGLCFLANV 250

Query: 220 RDESEKVG-------------GLANIHLNFERR-------RLSRMKVLIVFYDLTDLKQI 259
           R+ S+K G             G  NI L  + +       RL+  K+L++  D+   +Q+
Sbjct: 251 RENSDKHGLERLQEKLLLEILGEKNISLTSKEQGIPIIESRLTGKKILLILDDVDKREQL 310

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             + GR   F PGS++IITTRD QLL +H    V   +E+KEL   D+L L +  AF + 
Sbjct: 311 QAIAGRPGWFGPGSKIIITTRDKQLLTSHE---VYKKYELKELDEKDALQLLTWEAFKKE 367

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                ++E+ + V+ YA+G+PL L+V+GS+L G S +EWESA+ + KR+P  +I  +L+V
Sbjct: 368 KACPTYVEVLHRVVTYASGLPLVLKVIGSHLVGKSIQEWESAIKQYKRIPKKEILDILRV 427

Query: 380 SYDGLDDEEQNIFLDTACFFKG----NDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS- 434
           S+D L++EE+ +FLD AC FKG      ++++ +  D C    K  I  LVGKSL+ +S 
Sbjct: 428 SFDALEEEEKKVFLDIACCFKGWRLKEVEHILRDGYDDC---MKHHIGVLVGKSLIKVSG 484

Query: 435 -NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL----------------- 476
            ++ + MHDL+Q+MG  I  QES +DPGKR RLW  +DI +VL                 
Sbjct: 485 WDDVVNMHDLIQDMGKRI-DQESSEDPGKRRRLWLTKDIIEVLEGNSGSREIEMICLDLS 543

Query: 477 ---NENTSLPTGINLDSLKELYLGGCSNLK------RFPE-----------ISCNIEDLD 516
               E T    G     +K L +    N K       FPE            +C   +  
Sbjct: 544 LSEKEATIEWEGDAFKKMKNLKILIIRNGKFSKGPNYFPESLRLLEWHRYPSNCLPSNFP 603

Query: 517 LKETAIEELPSS------------------------------IGNLSRLVDLD---LTNC 543
            KE AI +LP S                              I ++S L +L+      C
Sbjct: 604 PKELAICKLPQSCITSFGFHGSRKKFRNLKVLKFNKCEFLTEIHDVSDLPNLEELSFDGC 663

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQ 602
             L +V   +  L  L+ LN +GC KL   P    NL SLE L L+     E  P  + +
Sbjct: 664 GNLITVHHSIGFLSKLKILNATGCRKLTTFPPL--NLTSLETLQLSSCSSLENFPEILGE 721

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           +  L+ L+L +      L ELP    +  ++   LKTLS
Sbjct: 722 MKNLTSLKLFDL----GLKELP----VSFQNLVGLKTLS 752



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 37/180 (20%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           T+ P  +NL SL+ L L  CS+L+ FPEI     N+  L L +  ++ELP S  NL  L 
Sbjct: 691 TTFPP-LNLTSLETLQLSSCSSLENFPEILGEMKNLTSLKLFDLGLKELPVSFQNLVGLK 749

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGN------------ 579
            L L +C G+  + S +  +  L  L    C     +K E+  E++G+            
Sbjct: 750 TLSLGDC-GILLLPSNIVMMPKLDILWAKSCEGLQWVKSEEREEKVGSIVCSNVYHFSVN 808

Query: 580 ---------------LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                          L+ ++ L+L + +F  +P S+K+L  L  L +  C  LQ +  +P
Sbjct: 809 GCNLYDDFFSTGFVQLDHVKTLSLRDNNFTFLPESIKELQFLRKLDVSGCLHLQEIRGVP 868



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 25/155 (16%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L +L+EL   GC NL     I+ +                SIG LS+L  L+ T C  L
Sbjct: 651 DLPNLEELSFDGCGNL-----ITVH---------------HSIGFLSKLKILNATGCRKL 690

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
            +      NL SL  L LS C  LE  PE +G +++L  L L +   +++P S + L  L
Sbjct: 691 TTFPP--LNLTSLETLQLSSCSSLENFPEILGEMKNLTSLKLFDLGLKELPVSFQNLVGL 748

Query: 607 SDLRLQNCKRL---QSLPELPCGSSIHARHCTSLK 638
             L L +C  L    ++  +P    + A+ C  L+
Sbjct: 749 KTLSLGDCGILLLPSNIVMMPKLDILWAKSCEGLQ 783


>gi|359495256|ref|XP_002272078.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1130

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 256/761 (33%), Positives = 363/761 (47%), Gaps = 151/761 (19%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           MAS  S+    P  K+DVFLSFRG+D    F  HL  AL       F DD K  +  EI+
Sbjct: 1   MASVDST--FAPQWKYDVFLSFRGEDTGKTFTDHLYTALDENGFYAFRDDEKHEKREEIA 58

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P   +AIE SKISI++FS+ YASSRWCL+EL  I++S  K G++V+PVFY VDPS+    
Sbjct: 59  PEFLTAIEESKISILVFSKNYASSRWCLDELETIIKSMKKPGRMVMPVFYHVDPSEVRDQ 118

Query: 117 -GYCPS----------------------------LGWMGIFDIPTSESVLIEGNVNDISK 147
            G C                              +GW         ES LI+  + DI +
Sbjct: 119 IGSCEVFLSHERDAEETKEKVNRWRAALREASNLVGWRLHNQANWYESQLIKEIITDILR 178

Query: 148 KLS-DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
           +L+ +L   D     VG+E  +K++ S +     +   +GI GI GIGKTTIA AIY+ I
Sbjct: 179 RLNCELLQVDY--DTVGMEFRLKKLLSLINLKLDKVLMIGINGISGIGKTTIAKAIYNKI 236

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIHLNFER-------------RRLSRMKVLIVFYDL 253
           S HF+ + F+ N+ + S         HLN  +              R    +VL+V  D+
Sbjct: 237 SYHFQSTIFLTNVGENSR------GHHLNLPQFQQLLDDASIGTYGRTKNKRVLLVVDDV 290

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             L Q++ L+   D F   SR+I TTRD  LL     +++   +E K L++ +++ LFS 
Sbjct: 291 DRLSQVEYLVKLRDSFSLRSRIIFTTRDRHLLN---VAKLDASYESKGLTHEEAIHLFSW 347

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AF Q  P   ++ L N V+ Y  G PLAL+VLGS L G +  EW+  ++KL++  H +I
Sbjct: 348 HAFKQTFPKEDYVGLVNHVVGYVKGHPLALKVLGSSLFGKTITEWKCILHKLRKNTHGEI 407

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
              LKVS+DGL   EQ IFL   C  KG D+  V   LD+    ++ GI  L    L TI
Sbjct: 408 YNELKVSFDGLTPTEQEIFLKVVCLLKGKDEESVSTILDSLGLGSESGIQVLHDMCLATI 467

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------------- 480
           SNNK+ MHDLLQ+MG +++ + +  +P KRSRL   +D+Y  L  NT             
Sbjct: 468 SNNKLYMHDLLQQMGQKLIDENNPHEPSKRSRLQDSKDVYPRLTRNTGTEEIQKIQFSSA 527

Query: 481 -----------------SLPTGINLDSLKELYLGGC-SNLKR-----FPEISCN-----I 512
                            SLP     DSL  ++L    SN+++     +P ++ N     I
Sbjct: 528 GFLKMPKLYSLMHLPLKSLPPNFPGDSL--IFLDWSRSNIRQLWKDEYPRLTRNTGTEAI 585

Query: 513 EDL-----------------------DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV 549
           + L                       DL  + I +L     +L  L  ++L+ C  L  +
Sbjct: 586 QKLLSPMHLPLKSLPPNFPGDSLILLDLSRSNIRQLWKGNKSLGNLKVMNLSYCQNLVKI 645

Query: 550 SS----------RLCNLKSLRRLN-------------LSGCLKLEKLPEEIGNLESLEYL 586
           S           RL   K LR L               SGC  LE  PE    +E+L+ L
Sbjct: 646 SKFPSMPALKILRLKGCKKLRSLPSSICELKCLECLWCSGCSNLEAFPEITEKMENLKEL 705

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE--LPC 625
           +L E   +++PSS+  L+ L  L L++CK L S     LPC
Sbjct: 706 HLDETAIKELPSSIYHLTALEFLNLEHCKNLGSELRSCLPC 746


>gi|2245047|emb|CAB10466.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1038

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 233/683 (34%), Positives = 349/683 (51%), Gaps = 83/683 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA++SSS +     ++DVF SF G DVR  F+S+L  A  R  I TF+D  + R   I+P
Sbjct: 1   MAAASSSCSR----RYDVFPSFSGVDVRKTFLSNLLEAFDRRSINTFMDHGIERSRTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L SAI  ++ISIVIFS+ YASS WCL+ELV+I    N +GQ+V+ VFY VDPS+     
Sbjct: 57  ELISAIREARISIVIFSKNYASSTWCLDELVEIHNRLNDWGQLVISVFYDVDPSEVRKQT 116

Query: 117 --------GYC------PSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSD 151
                     C          WM  + DI            SE+ ++    ND+S KL  
Sbjct: 117 GEFGDVFKKTCEDKEEDQKQRWMQALVDITNIAGEDLRNGPSEAAMVVKIANDVSNKL-- 174

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + PS++    VG+E+ ++ + S L   S E   VGIWG  GIGK+TI  A+YS +   F 
Sbjct: 175 ISPSNSFGDFVGIEAHLEAMNSILCLESKEARMVGIWGPSGIGKSTIGKALYSQLFCQFH 234

Query: 212 GSYFMQNI---RDESE------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
              F+ ++   + E E            K+GG     L    + L++ KVLIV  D+ D 
Sbjct: 235 FHAFVPHVYSMKSEWEEIFLSKILGKDIKIGG----KLGVVEQMLNQKKVLIVLDDVDDP 290

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           + +  L+G    F PGSR+I+ T+D+QLLK H    +  ++EVK  S + +L +  R+AF
Sbjct: 291 EFLKTLVGETKWFGPGSRIIVITQDMQLLKAHD---IDLLYEVKFPSLDLALKMLCRSAF 347

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           G+N P   F  L+  V   A  +PL L VLGS LK  ++EEW   + + +   + DI K 
Sbjct: 348 GENSPPDDFKALAFEVAVLAGNLPLGLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKT 407

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
           L+VSYD L  ++Q++FL  AC F G +   V + L+       +G++ LV KSL+ I+ +
Sbjct: 408 LRVSYDRLHQKDQDMFLYIACLFNGFEVSYVNDLLE-----DNVGVTMLVEKSLIRITPD 462

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGI---NLDSLK 492
             I MH+LL+++G EI R +S  +PGKR  L   ED  +         T      L  + 
Sbjct: 463 GDIEMHNLLEKLGIEIDRAKSKGNPGKRRFLTDFEDTLRKTVLGIRFCTAFRSKELLPID 522

Query: 493 ELYLGGCSNLK---------RFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           E    G  NL+           P+    +   +  LD     ++ LP S      L+ L 
Sbjct: 523 EKSFQGMRNLQCLSVTGDYMDLPQSLVYLPPKLRLLDWDRCPLKCLPYSF-KADYLIQLT 581

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
           +   S L+ +      L SL+R+N+ G   L ++  ++ N  +LE LNL+E +    + S
Sbjct: 582 MMG-SKLEKLWEGTVPLGSLKRMNMHGSRYLREI-SDLSNARNLEELNLSECRSLVTLSS 639

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S++   KL  L ++ C +L+S P
Sbjct: 640 SIQNAIKLIYLDMRGCTKLESFP 662



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 54/86 (62%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT +NL SLK L L GCS+L+ FP IS +I+ L L+ TAIEE+P  I N S L  L + 
Sbjct: 819 LPTDVNLSSLKMLDLSGCSSLRTFPLISKSIKWLYLENTAIEEVPCCIENFSWLTVLMMY 878

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGC 567
            C  LK++S  +  L  L+ ++ + C
Sbjct: 879 CCKRLKNISPNIFRLTILKLVDFTEC 904



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 43/155 (27%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L SL E+ +  C NL   P++S                       + LV+L L+NC  L
Sbjct: 754 SLASLVEMDMSECGNLTEIPDLS---------------------KATNLVNLYLSNCKSL 792

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA----------------- 589
            +V S + NL+ L RL +  C  LE LP ++ NL SL+ L+L+                 
Sbjct: 793 VTVPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIKW 851

Query: 590 ----EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                   E++P  ++  S L+ L +  CKRL+++
Sbjct: 852 LYLENTAIEEVPCCIENFSWLTVLMMYCCKRLKNI 886



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
           S + N   L +L+L+ C  L ++SS + N   L  L++ GC KLE  P  + NLESLEYL
Sbjct: 615 SDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKLESFPTHL-NLESLEYL 673

Query: 587 NLAEKD-FEKIPSSMKQLSKLS----DLRLQNCKRLQSLPEL 623
            L   D     P    + S  S    ++R++NC   ++LP L
Sbjct: 674 GLLYYDNLRNFPVFKMETSTTSPHGIEIRVENCIWNKNLPGL 715



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 522 IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
           +E+L   + +L+ LV++D++ C  L  +   L    +L  L LS C  L  +P  IGNL+
Sbjct: 745 LEKLWEGVQSLASLVEMDMSECGNLTEIPD-LSKATNLVNLYLSNCKSLVTVPSTIGNLQ 803

Query: 582 SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L  L + E    E +P+ +  LS L  L L  C  L++ P
Sbjct: 804 KLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFP 843


>gi|13509213|emb|CAC35326.1| Ngc-C protein [Linum usitatissimum]
          Length = 1120

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 241/753 (32%), Positives = 374/753 (49%), Gaps = 124/753 (16%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S+  +   +P  ++++FLSFRG DVR  F  HL  +L R K  TF D++ L +G  I P
Sbjct: 17  SSADLTPTSLPSGEYEIFLSFRGLDVRKTFADHLYTSLVRSKFRTFRDEEELEKGGTIGP 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDPSD 115
           SL  AI  SKI I I ++ YASS+WCL EL K+++     G      I++PVF  VDP D
Sbjct: 77  SLIRAITESKIYIPIMTQNYASSKWCLQELAKMVDCWKSGGGAKGQHIILPVFLFVDPRD 136

Query: 116 AGYCPSLGWMGIFDIPTS----ESVL-------------------IEGNVNDISKKLSD- 151
             +  S  +   F+  +     E+VL                    +G+ + I K L++ 
Sbjct: 137 VRHTESGSYKEAFEQHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEV 196

Query: 152 -LFPSDN----KDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            L    N     D+LVG++S + E+   L L  ST    +GI G+GG+GKTT+A A+Y  
Sbjct: 197 ELHLGANYTLVTDELVGIDSRVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDK 256

Query: 206 ISSHFEGSYFMQNIRDE-SEKVG----------GL----------ANIHLNFERRRLSRM 244
           +S+ FE  YF++NIRD  SEK G          G+          A+  +   R R+ R 
Sbjct: 257 VSTKFERCYFLENIRDTLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+LIV  D+ +  Q D ++G+L+ F   SR +ITTRD + L+  R  ++   FE++E+S 
Sbjct: 317 KLLIVLDDVDEKFQFDEVLGKLNNFSMDSRFLITTRDARGLELLRECKM---FELQEMSP 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SLTLF++NAFG   P   +  LSN  ++ A G+PL ++V+GS L  M +  WE  + +
Sbjct: 374 DHSLTLFNKNAFGAEFPPEDYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
            K++    +Q+ LK+SY+ L   E+ IFLD AC+F G+ +   M     C F  +  I  
Sbjct: 434 FKKISPTKVQERLKISYNELTYNEKQIFLDIACYFIGSYKIEPMRMWSDCDFYPESTIRY 493

Query: 425 LVGKSLVTISN--------NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           L  +SL+ +          N   MH+ ++++G  IVR+E+ ++P KRSR+W  +D   +L
Sbjct: 494 LTQRSLIKLQRSEVKGDDINTFQMHNHVRDLGRAIVREENNQNPYKRSRIWSNKDAIDML 553

Query: 477 NENTS----------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDL 517
                                + T   L+ L  L     SN +    F ++  N+  L L
Sbjct: 554 KHKKGTDCVEVLTVDMEGEDLILTNKELEKLTRLRYLSVSNARLAGDFKDVLPNLRWLRL 613

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCS---GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
              + + +P+ +  L++LVDL+L +CS   G K  +  L     L+ + L  C  L+K+P
Sbjct: 614 H--SCDSVPTGL-YLNKLVDLELVDCSVRDGWKGWNE-LKVAHKLKAVTLERCFHLKKVP 669

Query: 575 E----------------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           +                      +IGN +SL +L ++     KI   + +L  L  L   
Sbjct: 670 DFSDCGDLEFLNFDGCRNMHGEVDIGNFKSLRFLMISNTKITKIKGEIGRLLNLKYLIAS 729

Query: 613 NCKRLQSLPELPCGSSIHARHCTSLKTLSNSST 645
           N     SL E+P G S      +SLK LS + T
Sbjct: 730 N----SSLKEVPAGIS----KLSSLKWLSLTLT 754


>gi|15237438|ref|NP_199457.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177582|dbj|BAB10813.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008004|gb|AED95387.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1123

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 236/713 (33%), Positives = 350/713 (49%), Gaps = 113/713 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G+DVR  F+SH    L R+ I TF D+++ R   I+P L  AI+ S+I++++
Sbjct: 13  YDVFPSFSGEDVRKTFLSHFLRELERKSIITFKDNEMERSQSIAPELVEAIKDSRIAVIV 72

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSLG 123
           FS+ YASS WCLNEL++I+      GQ V+PVFY +DPS                C +  
Sbjct: 73  FSKNYASSSWCLNELLEIMRCNKYLGQQVIPVFYYLDPSHLRKQSGEFGEAFKKTCQNQT 132

Query: 124 ------W-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 W   + D+            SE+ +IE   + I  KLS L PS++ ++ VG++ 
Sbjct: 133 EEVKNQWKQALTDVSNILGYHSKNCNSEATMIEEISSHILGKLS-LTPSNDFEEFVGIKD 191

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN--IRDESE 224
            I+++   L   S E   VGIWG  GIGKTTIA A++SN+SS F+ S ++    I    E
Sbjct: 192 HIEKVRLLLHLESDEVRMVGIWGTSGIGKTTIARALFSNLSSQFQSSVYIDRAFISKSME 251

Query: 225 KVG----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
             G                      G  N+ +     RL   KVLI+  DL D   +D L
Sbjct: 252 GYGRANPDDYNMKLRLRENFLFEILGKKNMKIGAMEERLKHQKVLIIIDDLDDQDVLDAL 311

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           +GR   F  GSR+I+ T++   L+ H    + HV+E    S   +L +F R AF +N P 
Sbjct: 312 VGRTQWFGSGSRIIVVTKNKHFLRAHG---IDHVYEACLPSEELALEMFCRYAFRKNSPP 368

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
            GF+ELS+ V   A  +PL L+VLGSYL+G   E+W   + +L+      I+K L+VSYD
Sbjct: 369 DGFMELSSEVALRAGNLPLGLKVLGSYLRGRDIEDWMDMMPRLQNDLDGKIEKTLRVSYD 428

Query: 383 GLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMH 441
           GL++ +++ IF   AC F G     +   L        IG+  LV KSL+ +  + I MH
Sbjct: 429 GLNNKKDEAIFRHIACLFNGEKVNDIKLLLAESDLDVNIGLKNLVDKSLIFVREDTIEMH 488

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD-------SLK 492
            LLQ+MG EIVR +S  +PG+R  L   + IY VL +NT      GI LD        + 
Sbjct: 489 RLLQDMGKEIVRAQS-NEPGEREFLVDSKHIYDVLEDNTGTKKVLGIALDINETDGLYIH 547

Query: 493 ELYLGGCSNL---------------------------------KRFPEISC--------N 511
           E    G  NL                                 +++P + C        N
Sbjct: 548 ESAFKGMRNLLFLNFYTKQKKDVTWHLSEGFDHLPPKLRLLSWEKYP-LRCMPSNFRPEN 606

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           +  L + E+ +E+L   + +L+ L ++DL     LK +   L    +L++L++S C  L 
Sbjct: 607 LVKLQMCESKLEKLWDGVHSLTGLRNMDLRGSENLKEIPD-LSLATNLKKLDVSNCTSLV 665

Query: 572 KLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +L   I NL  LE L +   ++ E +P  +  L  L  L L  C +L+S P++
Sbjct: 666 ELSSTIQNLNQLEELQMERCENLENLPIGI-NLESLYCLNLNGCSKLRSFPDI 717



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 83/150 (55%), Gaps = 8/150 (5%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG--NLSRLVDL 538
           +LP GINL+SL  L L GCS L+ FP+IS  I +L L ETAIEE P+ +   NL  L   
Sbjct: 690 NLPIGINLESLYCLNLNGCSKLRSFPDISTTISELYLSETAIEEFPTELHLENLYYLGLY 749

Query: 539 DLTNCSGLKSVS--SRLCNL--KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           D+ +    K V   + L  +   SL +L LS    L +LP    NL +LE+LN+A   + 
Sbjct: 750 DMKSEKLWKRVQPLTPLMTMLSPSLTKLFLSDIPSLVELPSSFQNLHNLEHLNIARCTNL 809

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           E +P+ +  L  L  L    C RL+S P++
Sbjct: 810 ETLPTGV-NLELLEQLDFSGCSRLRSFPDI 838



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 54/90 (60%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTG+NL+ L++L   GCS L+ FP+IS NI  L L  T IEE+P  I +  RL  L +
Sbjct: 811 TLPTGVNLELLEQLDFSGCSRLRSFPDISTNIFSLVLDGTGIEEVPWWIEDFYRLSFLSM 870

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
             C+ L+ VS  +  L+ L  ++ S C  L
Sbjct: 871 IGCNNLQGVSLNISKLEKLETVDFSDCEAL 900


>gi|351722777|ref|NP_001235720.1| resistance protein KR3 [Glycine max]
 gi|24637543|gb|AAN63807.1| resistance protein KR3 [Glycine max]
          Length = 636

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 197/526 (37%), Positives = 304/526 (57%), Gaps = 66/526 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           ++DVF++FRG+D R  F  HL+ ALC + I  F+D+  + RG+EI  +L  AI+GS+I+I
Sbjct: 34  RYDVFINFRGEDTRFAFTGHLHKALCNKGIRAFMDENDIKRGDEIRATLEEAIKGSRIAI 93

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGWMGIF 128
            +FS+ YASS +CL+EL  IL    +   +V+PVFY VDPSD       Y   L  +   
Sbjct: 94  TVFSKDYASSSFCLDELATILGCYREKTLLVIPVFYKVDPSDVRRLQGSYAEGLARLEER 153

Query: 129 DIPTSE---------SVLIEGNVND--------ISKKLSDLFPSDNK--------DQLVG 163
             P  E         + L   +  D        I K + D+F   NK        D  VG
Sbjct: 154 FHPNMENWKKALQKVAELAGHHFKDGAGYEFKFIRKIVDDVFDKINKAEASIYVADHPVG 213

Query: 164 VESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           +   +++I   L +GS++  + +GI G+GG+GK+T+A A+Y+  + HF+ S F+QN+R+E
Sbjct: 214 LHLEVEKIRKLLEAGSSDAISMIGIHGMGGVGKSTLARAVYNLHTDHFDDSCFLQNVREE 273

Query: 223 SEKVG--GLANIHLN-----------------FERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           S + G   L +I L+                   + +L   KVL+V  D+ + KQ+  ++
Sbjct: 274 SNRHGLKRLQSILLSQILKKEINLASEQQGTSMIKNKLKGKKVLLVLDDVDEHKQLQAIV 333

Query: 264 GR--LDGFVPGSRV--IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ- 318
           G+        G+R+  IITTRD QLL ++ G +  H  EVKELS  D++ L  R AF   
Sbjct: 334 GKSVWSESEFGTRLVLIITTRDKQLLTSY-GVKRTH--EVKELSKKDAIQLLKRKAFKTY 390

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           +     + ++ N V+ + +G+PLAL+V+GS L G S +EWESA+ + +R+P+ +I K+LK
Sbjct: 391 DEVDQSYNQVLNDVVTWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNKEILKILK 450

Query: 379 VSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
           VS+D L++EE+++FLD  C  KG      + ++ +  D C    K  I  LV KSL+ IS
Sbjct: 451 VSFDALEEEEKSVFLDITCCLKGYKCREIEDILHSLYDNC---MKYHIGVLVDKSLIQIS 507

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           ++++T+HDL++ MG EI RQ+S K+ GKR RLW  +DI QVL +N+
Sbjct: 508 DDRVTLHDLIENMGKEIDRQKSPKETGKRRRLWLLKDIIQVLKDNS 553


>gi|298378158|gb|ADI80539.1| recognition of Peronospora parasitica 1 [Arabidopsis thaliana]
          Length = 1154

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 244/769 (31%), Positives = 361/769 (46%), Gaps = 140/769 (18%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 90  KHDVFPSFHGADVRRTFLSHILESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 149

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-------- 126
           + S  YASS WCL+EL +I+  +   GQIV+ +FY VDP+D       G  G        
Sbjct: 150 LLSRKYASSSWCLDELAEIMICREVLGQIVMTIFYEVDPTDIK--KQTGEFGKAFTKTCR 207

Query: 127 -------------IFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                        + D+ T           E+ +IE    D+S  L    PS + D  VG
Sbjct: 208 GKPKEQVERWRKALEDVATIAGYHSHKWCDEAEMIEKISTDVSNMLDLSIPSKDFDDFVG 267

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD-- 221
           + + ++  E  L     E   +GIWG  GIGKTTIA+ ++   SS F  +  M +IR+  
Sbjct: 268 MAAHMEMTEQLLRLDLDEVRMIGIWGPPGIGKTTIAACMFDRFSSRFPFAAIMTDIRECY 327

Query: 222 --------------ESEKVGGLANI------HLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                         + + +  + N       HL     RL   KV +V  ++  L Q+D 
Sbjct: 328 PRLCLNERNAQLKLQEQMLSQIFNQKDTMISHLGVAPERLKDKKVFLVLDEVGHLGQLDA 387

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L      F PGSR+IITT D+ +LK H    + HV++VK  S +++  +F  NAFGQ  P
Sbjct: 388 LAKETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVKSPSNDEAFQIFCMNAFGQKQP 444

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF  L+  V   A  +PL L+VLGS L+GMS+ EWE  + +LK     +I  +++ S+
Sbjct: 445 CEGFWNLAWEVTCLAGKLPLGLKVLGSALRGMSKPEWERTLPRLKTSLDGNIGSIIQFSF 504

Query: 382 DGLDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           D L DE++ +FL  AC F        ++ L   FLD  +     GI  L  KSL++    
Sbjct: 505 DALCDEDKYLFLYIACLFNNESTTKVEEVLANKFLDVGQ-----GIHVLAQKSLISFEGE 559

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENT---SLPTGINLD--- 489
           +I MH LL + G E  R++ +     + +L   E DI +VLN++T       GINLD   
Sbjct: 560 EIQMHTLLVQFGRETSRKQFVHHRYTKHQLLVGERDICEVLNDDTIDSRCFIGINLDLSK 619

Query: 490 ----------SLKELY------LGGCSNLKRF---------------------------- 505
                     +L+ ++      +G     KR                             
Sbjct: 620 NEERWNISEKALERMHDFQFVRIGAFYQRKRLSLALQDLIYHSPKLRSLKWYGYQNICLP 679

Query: 506 ----PEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
               PE    + +LD+  + +  L      L  L  +DL+  S LK + + L    +L  
Sbjct: 680 STFNPEF---LVELDMSFSKLWNLWEGTKQLRNLKWMDLSYSSYLKELPN-LSTATNLEE 735

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           L LS C  L +LP   GN   LE L+L   +   K+P +++  +KL  L+L++C  L  L
Sbjct: 736 LRLSNCSSLVELP-SFGNATKLEKLDLENCRSLVKLP-AIENATKLRKLKLEDCSSLIEL 793

Query: 621 PELPCGSSIHARH-----CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           P L  G++ + +      C+SL  L +S   +T      + F+ SNCSN
Sbjct: 794 P-LSIGTATNLKKLDMNGCSSLVRLPSSIGDMT----SLEGFDLSNCSN 837



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 29/161 (18%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT INL SL+ L L  CS LK FPEIS +I+ L L  TAI+E+P SI + S L D  +
Sbjct: 864 TLPTNINLISLRILDLTDCSRLKSFPEISTHIDSLYLIGTAIKEVPLSIMSWSPLADFQI 923

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +    LK                        + P     +  L+      KD +++P  +
Sbjct: 924 SYFESLK------------------------EFPHAFDIITKLQL----SKDIQEVPPWV 955

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
           K++S+L DLRL NC  L SLP+LP   + ++A +C SL+ L
Sbjct: 956 KRMSRLRDLRLNNCNNLVSLPQLPDSLAYLYADNCKSLERL 996


>gi|27764537|gb|AAO23067.1| R 12 protein [Glycine max]
          Length = 893

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 242/712 (33%), Positives = 349/712 (49%), Gaps = 117/712 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFI-DDKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSF  +D    F  +L  AL    I TF  D +L R  E++P L  AI  S+++I+
Sbjct: 12  YDVFLSFIREDTHRGFTFYLYKALNDRGIYTFFYDQELPRETEVTPGLYKAILASRVAII 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           + SE YA S +CL+ELV IL  + +    V+PVF+ VDPSD       Y  ++       
Sbjct: 72  VLSENYAFSSFCLDELVTILHCERE----VIPVFHNVDPSDVRHQKGSYGEAMAKHQKRF 127

Query: 124 -------W-MGIFDIP-----------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                  W M +  +            + E +LI   V  +S+    L      D  VG+
Sbjct: 128 KAKKLQKWRMALKQVANLCGYHFKDGGSYEYMLIGRIVKQVSRMFG-LASLHVADYPVGL 186

Query: 165 ESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ES + E+   L  GS +  + +GI G+GG+GKTT+A A+Y+ I+ HF+ S F+QN+R+ES
Sbjct: 187 ESQVTEVMKLLDVGSDDVVHIIGIHGMGGLGKTTLAMAVYNFIAPHFDESCFLQNVREES 246

Query: 224 EKVGGLANIHLNFERRRLSRMKVLIVFY---------------------DLTDLKQIDLL 262
            K  GL ++      + L    + +  +                     D+   +Q+  +
Sbjct: 247 NK-HGLKHLQSVLLSKLLGEKDITLTSWQEGASMIQHRLRLKKILLILDDVDKREQLKAI 305

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
           +G+ D F PGSRVIITTRD  LLK H   R    +EV  L+++D+  L + NAF +    
Sbjct: 306 VGKPDWFGPGSRVIITTRDKHLLKYHEVERT---YEVNVLNHDDAFQLLTWNAFKREKID 362

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             + ++ N V+ YA+G+PLAL+V+GS L G +  EWESA+   KR+P  +I K+L+VS+D
Sbjct: 363 PSYKDVLNRVVTYASGLPLALEVIGSNLYGKTVAEWESALETYKRIPSNEILKILEVSFD 422

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI-GISRLVGKSL---VTISNNKI 438
            L++E++N+FLD AC FKG     V +   A   + K+  I  LV KSL   V+  +N +
Sbjct: 423 ALEEEQKNVFLDIACCFKGYKWTEVYDIFRALYSNCKMHHIGVLVEKSLLLKVSWRDN-V 481

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS------ 490
            MHDL+Q+MG +I RQ S ++PGK  RLW P+DI QVL  N  TS    I LDS      
Sbjct: 482 EMHDLIQDMGRDIERQRSPEEPGKCKRLWSPKDIIQVLKHNTGTSKLEIICLDSSISDKE 541

Query: 491 ----LKELYLGGCSNLK--------------RFPE-----------ISCNIEDLDLKETA 521
                 E       NLK               FPE            +C   + D     
Sbjct: 542 ETVEWNENAFMKMENLKILIIRNGKFSKGPNYFPEGLRVLEWHRYPSNCLPSNFDPINLV 601

Query: 522 IEELP-SSI--------GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
           I +LP SSI          L  L  L    C  L  +   + +L +LR L+  GC  L  
Sbjct: 602 ICKLPDSSITSLEFHGSSKLGHLTVLKFDKCKFLTQIPD-VSDLPNLRELSFVGCESLVA 660

Query: 573 LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           + + IG L  LE LN A  +     P     L+ L  L L +C  L+  PE+
Sbjct: 661 IDDSIGFLNKLEILNAAGCRKLTSFPPL--NLTSLETLELSHCSSLEYFPEI 710



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 25/168 (14%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T +P   +L +L+EL   GC +L                  AI++   SIG L++L  L+
Sbjct: 636 TQIPDVSDLPNLRELSFVGCESL-----------------VAIDD---SIGFLNKLEILN 675

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
              C  L S      NL SL  L LS C  LE  PE +G +E++  L+L     +++P S
Sbjct: 676 AAGCRKLTSFPP--LNLTSLETLELSHCSSLEYFPEILGEMENITALHLERLPIKELPFS 733

Query: 600 MKQLSKLSDLRLQNCK--RLQ-SLPELPCGSSIHARHCTSLKTLSNSS 644
            + L  L ++ L+ C+  RL+ SL  +P       R+C S + + + +
Sbjct: 734 FQNLIGLREITLRRCRIVRLRCSLAMMPNLFRFQIRNCNSWQWVESEA 781


>gi|13509238|emb|CAC35339.1| Nho-C protein [Linum usitatissimum]
          Length = 1120

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 241/753 (32%), Positives = 373/753 (49%), Gaps = 124/753 (16%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S+  +   +P  ++++FLSFRG DVR  F  HL  +L R K  TF D++ L +G  I P
Sbjct: 17  SSADLTPTSLPSGEYEIFLSFRGLDVRKTFADHLYTSLVRSKFRTFRDEEELEKGGTIGP 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDPSD 115
           SL  AI  SKI I I ++ YASS+WCL EL K+++     G      I++PVF  VDP D
Sbjct: 77  SLIRAITESKIYIPIMTQNYASSKWCLQELAKMVDCWKSGGGAKGQHIILPVFLFVDPRD 136

Query: 116 AGYCPSLGWMGIFDIPTS----ESVL-------------------IEGNVNDISKKLSD- 151
             +  S  +   F+  +     E+VL                    +G+ + I K L++ 
Sbjct: 137 VRHTESGSYKEAFEQHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEV 196

Query: 152 -LFPSDN----KDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            L    N     D+LVG++S + E+   L L  ST    +GI G+GG+GKTT+A A+Y  
Sbjct: 197 ELHLGANYTLVTDELVGIDSRVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDK 256

Query: 206 ISSHFEGSYFMQNIRDE-SEKVG----------GL----------ANIHLNFERRRLSRM 244
           +S+ FE  YF++NIRD  SEK G          G+          A+  +   R R+ R 
Sbjct: 257 VSTKFERCYFLENIRDTLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+LIV  D+ +  Q D ++G+L+ F   SR +ITTRD + L+  R  ++   FE++E+S 
Sbjct: 317 KLLIVLDDVDEKFQFDEVLGKLNNFSMDSRFLITTRDARGLELLRECKM---FELQEMSP 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SLTLF++NAFG   P   +  LSN  ++ A G+PL ++V+GS L  M +  WE  + +
Sbjct: 374 DHSLTLFNKNAFGAEFPPEDYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
            K++    +Q+ LK+SY  L   E+ IFLD AC+F G+ +   M     C F  +  I  
Sbjct: 434 FKKISPTKVQERLKISYTELTYNEKQIFLDIACYFIGSYKIEPMRMWSDCDFYPESTIRY 493

Query: 425 LVGKSLVTISN--------NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           L  +SL+ +          N   MH+ ++++G  IVR+E+ ++P KRSR+W  +D   +L
Sbjct: 494 LTQRSLIKLQRSEVKGDDINTFQMHNHVRDLGRAIVREENNQNPYKRSRIWSNKDAIDML 553

Query: 477 NENTS----------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDL 517
                                + T   L+ L  L     SN +    F ++  N+  L L
Sbjct: 554 KHKKGTDCVEVLTVDMEGEDLILTNKELEKLTRLRYLSVSNARLAGDFKDVLPNLRWLRL 613

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCS---GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
              + + +P+ +  L++LVDL+L +CS   G K  +  L     L+ + L  C  L+K+P
Sbjct: 614 H--SCDSVPTGL-YLNKLVDLELVDCSVRDGWKGWNE-LKVAHKLKAVTLERCFHLKKVP 669

Query: 575 E----------------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           +                      +IGN +SL +L ++     KI   + +L  L  L   
Sbjct: 670 DFSDCGDLEFLNFDGCRNMHGEVDIGNFKSLRFLMISNTKITKIKGEIGRLLNLKYLIAS 729

Query: 613 NCKRLQSLPELPCGSSIHARHCTSLKTLSNSST 645
           N     SL E+P G S      +SLK LS + T
Sbjct: 730 N----SSLKEVPAGIS----KLSSLKWLSLTLT 754


>gi|297790452|ref|XP_002863116.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308940|gb|EFH39375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1090

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 243/728 (33%), Positives = 359/728 (49%), Gaps = 158/728 (21%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+ VR +F+SH+     R  I  FID+++ RG  I P L  AI  SKI+I++
Sbjct: 63  HHVFPSFRGEYVRRDFLSHIQMEFQRMGITPFIDNEIERGQSIGPELIRAIRESKIAIIL 122

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------- 115
            S  YASS WCL+EL +I++ +++ GQ V+ VFY VDPSD                    
Sbjct: 123 LSRNYASSSWCLDELAEIMKCRDELGQTVLAVFYKVDPSDVKKLTGDFGKVFKKTCAGKT 182

Query: 116 -----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                            AGY  S  W        +E+ +I+    DIS  L++   S + 
Sbjct: 183 KEHVGRWRQALANVATIAGY-HSTNW-------DNEAAMIKKIATDISNLLNNSSSSSDF 234

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           D LVG+   ++++E  L   S E   +GIWG  GIGKTTIA  IY+ +S  F+ S FM++
Sbjct: 235 DGLVGMREHLEKMEPLLCLDSDEVRMIGIWGPSGIGKTTIARVIYNKLSGSFQLSVFMES 294

Query: 219 IR---------DESEKV-------------GGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
           I          D S K+               +   HL   + RL   KVL+V   +   
Sbjct: 295 IEAKYTRPCSDDYSAKLQLQQQFMSQITNQSDMKISHLGVVQDRLKDKKVLVVLDGVDKS 354

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q+D ++     F PGSR+IITT+D +L ++H    + H++++   S  ++L +    AF
Sbjct: 355 MQLDAMVKETWWFGPGSRIIITTQDRKLFRSHG---INHIYKIDFPSTEEALQILCTYAF 411

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           GQN P        N+V+K        L+ L + L      EW  A+ +L+     +I  +
Sbjct: 412 GQNSP--------NVVLKNL------LRKLHNLLM-----EWMKALPRLRNSLDANILSI 452

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           LK SYD LDDE++ +FL  ACFF        + YL   FLD    S ++ +  L  KSL+
Sbjct: 453 LKFSYDALDDEDKYLFLHIACFFNHEEIEKVEDYLAETFLDV---SHRLNV--LAEKSLI 507

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP---TGINL 488
           +++   I MHDLL ++G +IVR++SI++PG+R  L    +I +VLN + +      GIN 
Sbjct: 508 SLNRGYINMHDLLVKLGRDIVRKQSIREPGQRLFLVDAREICEVLNLDANGSRSLMGINF 567

Query: 489 ----DSLKE-LYLG-----GCSNLK------------------------------RFPEI 508
               D +KE L++      G SNL+                               FP +
Sbjct: 568 NFGEDRIKEKLHISERAFQGMSNLQFLRVKGNNNTIHLPHGLEYISRKLRLLHWTYFP-M 626

Query: 509 SC-----NIE---DLDLKETAIE------ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC 554
           +C     N E   +LD+  + +E      +LPSSIGNL  L +LDL++ S L  + S + 
Sbjct: 627 TCLPPIFNTEFLVELDMSYSKLEKLWEGIKLPSSIGNLINLKELDLSSLSCLVELPSSIG 686

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQN 613
           NL +L+ L+LS    L +LP  IGN  +LE LNL +     K+P S+  L KL  L L+ 
Sbjct: 687 NLINLKELDLSSLSCLVELPFSIGNATNLEVLNLRQCSSLVKLPFSIGNLQKLQTLTLRG 746

Query: 614 CKRLQSLP 621
           C +L+ LP
Sbjct: 747 CSKLEDLP 754



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  I L SL EL L  C  LKRFPEIS N+E L L  TAIEE+PSSI + SRL ++D++
Sbjct: 753 LPANIKLGSLGELDLTDCLLLKRFPEISTNVEFLRLDGTAIEEVPSSIKSWSRLNEVDMS 812

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK+                                + +  L++   + ++ P  +K
Sbjct: 813 YSENLKNFPHA---------------------------FDIITELHMTNTEIQEFPPWVK 845

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           + S+L+ L L+ CK+L SLP++P   + I+A  C SL+ L  S
Sbjct: 846 KFSRLTVLILKGCKKLVSLPQIPDSITYIYAEDCESLERLDCS 888



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 3/115 (2%)

Query: 511 NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
           N+++LDL   + + ELPSSIGNL  L +LDL++ S L  +   + N  +L  LNL  C  
Sbjct: 666 NLKELDLSSLSCLVELPSSIGNLINLKELDLSSLSCLVELPFSIGNATNLEVLNLRQCSS 725

Query: 570 LEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           L KLP  IGNL+ L+ L L      E +P+++K L  L +L L +C  L+  PE+
Sbjct: 726 LVKLPFSIGNLQKLQTLTLRGCSKLEDLPANIK-LGSLGELDLTDCLLLKRFPEI 779


>gi|297837527|ref|XP_002886645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332486|gb|EFH62904.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1037

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 225/709 (31%), Positives = 352/709 (49%), Gaps = 111/709 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +++VF SF G DVR  F+SHL        I TF D+ + R   IS  L+ AI  S+ISIV
Sbjct: 13  RYNVFPSFHGPDVRVTFLSHLQKQFQHNGIITFNDEGIERSQTISSELTRAIRESRISIV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-------- 126
           + SE YASS WCLNEL++I + +   GQIV+ VFY VDPSD      +G  G        
Sbjct: 73  VLSENYASSSWCLNELLEISKCQESAGQIVMTVFYKVDPSDVR--KQMGEFGKAFKKTCQ 130

Query: 127 ----------------IFDIPTSESV-------LIEGNVNDISKKLSDLFPSDNKDQLVG 163
                           + +I    S+       +IE    D+S KL+     D  D +VG
Sbjct: 131 GKTEAKIHRWTQSLTHVANIAGEHSLNWDNEANMIEKIARDVSDKLNATLSKDF-DGMVG 189

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +E+ +++I+  L S + E  T+GI G GGIGKTTIA A+Y+ IS +F   YFM+N++   
Sbjct: 190 LEAHLRKIQYLLQSETDEAMTLGISGPGGIGKTTIARALYNQISRNFPLRYFMENVKGSY 249

Query: 224 EKV----------------------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
             +                       G+   +L+    RL   KVLI+  D+  L+Q+D 
Sbjct: 250 RNIDCDEHGSKLRLQEQLLSQILNHNGVKICNLDVIYERLRCQKVLIILDDVDSLEQLDA 309

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L   +  F  GSR+I+TT+D +LL+ +    + + + V   S  ++L +F R AF ++ P
Sbjct: 310 LAKDIYRFGHGSRIIVTTKDQELLQRYG---INNTYHVGFPSNEEALEIFCRYAFRRSSP 366

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF +L+  V +  + +PL L+V+GS L+G  E+EW+  +N+L+     D+++VL+V Y
Sbjct: 367 LYGFEKLAIRVTELCSNLPLGLRVVGSSLRGKCEDEWKVIMNRLETSLDGDLERVLRVGY 426

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITM 440
           D L +++Q +FL  A FF   D+  V   L       + G+  LV +SL+ IS N  I M
Sbjct: 427 DSLHEKDQALFLHIAIFFNYKDEDYVKAILGEDNLDVEHGLRNLVNRSLIDISTNGDIVM 486

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS-------- 490
           H LLQ+MG + + ++   +P KR  L    +I  VL  +T   T  GI+ D+        
Sbjct: 487 HKLLQQMGRQAIHRQ---EPWKRQILIDAHEICDVLEYDTGTRTVAGISFDASNISKVFV 543

Query: 491 -------LKELYLGGCSN---------------------LKRFPEISC-------NIEDL 515
                  ++ L     S+                      + +P  S        N+ +L
Sbjct: 544 SEGAFKRMRNLQFLSVSDENDRICIPEDLQFPPRLKLLHWEAYPRKSLPIRFYLENLVEL 603

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           D++ + +E+L      L+ L  +DL+    LK +   L N  +L+RLNL  C  L ++P 
Sbjct: 604 DMQNSQLEKLWKGPQLLTNLKKMDLSMSRHLKELPD-LSNATNLKRLNLDDCESLVEIPS 662

Query: 576 EIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
              NL  L+ L++ A    E IP+ M  L+ L  + +  C+RL++ P++
Sbjct: 663 SFSNLHKLKVLSMFACTKLEVIPTRMN-LASLESVNMTACQRLKNFPDI 710



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 15/149 (10%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL--VDLD 539
           +PT +NL SL+ + +  C  LK FP+IS NI  L +  TA+E++P+SI   SRL  +++ 
Sbjct: 684 IPTRMNLASLESVNMTACQRLKNFPDISRNILQLSISLTAVEQVPASIRLWSRLRVLNII 743

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE-YLNLAEKDFEKIPS 598
           +T+   LK+++      +S+R L LS    +E++P    +L  L+ YLN + K  + + +
Sbjct: 744 ITSNGKLKALTHV---PQSVRHLILSYT-GVERIPYCKKSLHRLQLYLNGSRKLADSLRN 799

Query: 599 SMKQLSKL--------SDLRLQNCKRLQS 619
             + + +L        + L   NC +L S
Sbjct: 800 DCEPMEQLICPYDTPYTQLNYTNCFKLDS 828


>gi|332330342|gb|AEE43928.1| TIR-NBS-LRR resistance protein muRdr1D [Rosa multiflora]
          Length = 1156

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 243/719 (33%), Positives = 364/719 (50%), Gaps = 108/719 (15%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISP 60
           ASSSS++      K+DVFLSFRG+D R  F  +L   L R+ I TF DD +L RG  ISP
Sbjct: 9   ASSSSALPW----KYDVFLSFRGEDTRKGFTDYLYHELERQGIRTFRDDPQLERGTAISP 64

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L +AIE S+ +I++ S  YASS WCL EL KILE   + G I+ P+FY VDPS      
Sbjct: 65  ELLTAIEQSRFAIIVLSPNYASSTWCLLELSKILECMEERGTIL-PIFYEVDPSHVRHQR 123

Query: 117 ----------------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKL-SDLF 153
                                 G+  +L  +      TSES      + +I K+L S + 
Sbjct: 124 GSFAEAFQEYEEKFGEDNEEVEGWRDALTKVASLAGWTSESYYETQLIKEIVKELWSKVH 183

Query: 154 PS----DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
           PS     + ++L G++S ++EI+  L   + +   +GIWG+GGIGKTT+A  +Y  IS  
Sbjct: 184 PSLTAFGSSEKLFGMDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYLKISHQ 243

Query: 210 FEGSYFMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLI 248
           FE   F+ N+R+ S+   GL ++                      +   ++ +    VL+
Sbjct: 244 FEVCIFLANVREASKTTYGLVDLQKQILSQILKEENVQVWNVYSGITIIKKCVCNKAVLL 303

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           +  D+   +Q+D L+G  D F   SR+IITTRD  +L  H    V   +E+K L+ +++L
Sbjct: 304 ILDDVDQSEQLDNLVGEKDCFGLRSRIIITTRDRHVLVTHG---VEKPYELKGLNEDEAL 360

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            LFS  AF    P   + E     + YA G+PLAL++LGS+L G + +EW SA+ KL++ 
Sbjct: 361 QLFSWKAFRNCKPEEYYAEPCKSFVMYAAGLPLALKILGSFLNGRTPDEWNSALAKLQQT 420

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
           P+  + ++LK+S+DGLD+ E+ IFLD ACF +      ++  +D+     +I  S L  K
Sbjct: 421 PYRTVFEILKISFDGLDEVEKKIFLDIACFRRLYRNEFMIELVDSSDPCNRITRSVLAEK 480

Query: 429 SLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--G 485
           SL+TI SNN++ +HDL+ EMG EIVRQE+ ++PG RSRL   +DI+ V   NT      G
Sbjct: 481 SLLTISSNNQVDVHDLIHEMGCEIVRQEN-EEPGGRSRLCLRDDIFHVFTMNTGTEAIEG 539

Query: 486 INLD------------------SLKELYLGG---------CSNLKRFPEISC-------- 510
           I LD                   LK LY+             N  RF + S         
Sbjct: 540 ILLDLAELEEADWNFEAFFKMCKLKLLYIHNLRLSLGPKYLPNALRFLKWSWYPSKSLPP 599

Query: 511 -----NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
                 + +L L  + I+ L + I  L +L  +DL+    LK  +     +++L +L L 
Sbjct: 600 GFQPDELAELSLAYSKIDHLWNGIKYLGKLKSIDLSYSINLKR-TPDFTGIQNLEKLVLK 658

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           GC  L K+   I  L+ L+  N    K  + +PS +  +  L    +  C +L+ +PE 
Sbjct: 659 GCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEF 716



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 41/222 (18%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LK 518
           KR ++W+  +   +     SLP+ +N++ L+   + GCS LK  PE    ++ L    L 
Sbjct: 674 KRLKIWNFRNCKSI----KSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMKRLSKLCLG 729

Query: 519 ETAIEELPSSIGNL--SRLVDLDLTNC-----------------------------SGLK 547
            TA+E+LPSSI +L    LV+LDL                                  L 
Sbjct: 730 GTAVEKLPSSIEHLMSESLVELDLKGIFMREQPYSFFLKLQNRIVSSFGLFPRKSPHPLV 789

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
            + + L +  SL  LNL+ C   E ++P +IG+L SLE L L   +F  +P S+  L KL
Sbjct: 790 PLLASLKHFSSLTTLNLNDCNLCEGEIPNDIGSLSSLERLELRGNNFVSLPVSIHLLFKL 849

Query: 607 SDLRLQNCKRLQSLPELPCGSSIHAR--HCTSLKTLSNSSTL 646
             + +QNCKRLQ LP+LP   S+  +  +CTSL+ L +   L
Sbjct: 850 QGIDVQNCKRLQQLPDLPVSRSLQVKSDNCTSLQVLPDPPDL 891


>gi|357493433|ref|XP_003617005.1| Disease resistance protein [Medicago truncatula]
 gi|355518340|gb|AES99963.1| Disease resistance protein [Medicago truncatula]
          Length = 1491

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 244/726 (33%), Positives = 352/726 (48%), Gaps = 106/726 (14%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEG 68
           N   H K+DVF+SFRG+D R     HL  AL  + I+T+ID +LNRG ++ P+LS AIE 
Sbjct: 10  NGTSHRKYDVFISFRGEDTRFGITDHLYDALIHKSIKTYIDYQLNRGEDVWPALSKAIED 69

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPS-- 121
           S ISI++FSE +A+S+WCL ELVK+LE +  +GQIV+PVFY  DPS      A Y  +  
Sbjct: 70  SYISIIVFSENFATSKWCLEELVKVLECRKDHGQIVIPVFYKADPSHIRNQKASYETAFA 129

Query: 122 ------------------LGWMGI---------FDIPT--SESVLIEGNVNDISKKLSDL 152
                             L W            +D  T   ES+LI   VND+ +KL   
Sbjct: 130 KHERELGTKDSISNKSKVLKWKAALTEAANISGWDSHTYEKESILILKIVNDVLEKLQLR 189

Query: 153 FPSD------NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
           +P++      N+     VES++K+           F  +GIW +GG+GKTTIA   ++  
Sbjct: 190 YPNELEGVVRNEKNSECVESLLKK-----------FRILGIWSMGGMGKTTIAKVFFAKH 238

Query: 207 SSHFEGSYFMQNIRD----------ESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
            + ++   F  N ++            E++     +      RRL   KVLIV  ++   
Sbjct: 239 FAQYDHVCFA-NAKEYSLSRLLSELLKEEISASDVVKSTIHMRRLRSRKVLIVLDNVESS 297

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q D L          SR+IITT+D QLL   RG RV  ++EVK      SL LF   AF
Sbjct: 298 DQFDYLCRDYHDLTQDSRLIITTKDKQLL---RG-RVDWIYEVKHWEDPKSLELFCLEAF 353

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
             ++P   +  L    I YA GVPLAL++L  +L+    E W S+  KL + P   + KV
Sbjct: 354 EPSNPREKYEHLLQKAITYAGGVPLALKLLALHLRSREIEFWVSSFKKLDKYPDGRLHKV 413

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           L+VSYD LD  ++ IFLD A FF G  +  V   LDAC F    GI  L  K+L+T+SNN
Sbjct: 414 LRVSYDELDALQKKIFLDIAFFFIGEKKERVTKILDACGFEPNSGIVVLKDKALITVSNN 473

Query: 437 K-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP---------------EDIYQVLNENT 480
             I MHDLLQ+MG +I+  +  +DP   +RL                  E I   L++N 
Sbjct: 474 HTIQMHDLLQKMGSDIICNDCGEDPATHTRLSGTAAFEVIEENKGSSSIEGIMLDLSQNN 533

Query: 481 SLP----TGINLDSLKELYLGGCSNLKR----FPEI-------SCNIEDLDLKETAIEEL 525
            LP    T   + +L+ L     S+L++    +P +       S  +   +      E L
Sbjct: 534 VLPLTSDTFTKMKALRILKFHAPSSLQKCTITYPYLPKFLKLFSKKLRYFEWYGYPFESL 593

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           P    +   LV++ + + S +K +   +  L  L  ++LS C  L KLP +     SL++
Sbjct: 594 PQPF-HAKFLVEIRMPH-SNVKQLWQGMKELGKLEGIDLSECKHLIKLP-DFSKASSLKW 650

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL---PELPCGSSIHARHCTSLKTLS 641
           +NL+  +    +P S+     L  L L  C ++ S+     L C   I    C SLK  +
Sbjct: 651 VNLSGCESLVDLPPSVLCADMLVTLILHRCTKITSVRGEKHLNCLEKISVDGCKSLKIFA 710

Query: 642 NSSTLL 647
            SS L+
Sbjct: 711 VSSNLI 716



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 33/215 (15%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           TS+    +L+ L+++ + GC +LK F   S  IE+LDL  T I+ L  SIG+L +L  L+
Sbjct: 684 TSVRGEKHLNCLEKISVDGCKSLKIFAVSSNLIENLDLSSTGIQTLDLSIGSLEKLKRLN 743

Query: 540 LT----NC--SGLKSVSS--------------------RLCNLKSLRRLNLSGCLKLEKL 573
           L     NC   GL SV+S                        L+SL+ L++   +   +L
Sbjct: 744 LDSLKLNCLPEGLSSVTSISELKISGSALIVEKQLLEELFDGLQSLQILHMKDFINQFEL 803

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL-PCGSSIHAR 632
           P  I  L  L+ LNL   + +++P S+K+L +L  L L NC+ L+ +PEL P  + ++A 
Sbjct: 804 PNNIHVLSKLKELNLDGSNMKRLPESIKKLEELEILSLVNCRELECIPELPPLVTLLNAV 863

Query: 633 HCTSLKTLSN---SSTLLTRSSKHWDIFNFSNCSN 664
           +CTSL ++SN    +T++   +KH    +FSN  N
Sbjct: 864 NCTSLVSVSNLKGLATMMMGKTKH---ISFSNSLN 895


>gi|332330344|gb|AEE43930.1| TIR-NBS-LRR resistance protein muRdr1F [Rosa multiflora]
          Length = 1161

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 236/736 (32%), Positives = 364/736 (49%), Gaps = 106/736 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F   L   L R+ I TF DD +L RG  IS  L +AIE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTDCLYHELQRQGIRTFRDDLQLERGTAISLELLTAIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YA+S WCL EL +I+E   + G I+ P+FY VDPS                   
Sbjct: 78  VVLSPKYATSTWCLLELSEIIECMEERGTIM-PIFYEVDPSHVRHQRGSFAEAFQEHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDLFPS----DNKDQL 161
                    G+  +L  +      TSE+   E   + +I + L S + PS     + ++L
Sbjct: 137 FGEGNKEVEGWRDALTKVASLAGWTSENYRYETELIREIVQALWSKVQPSLTVFGSSEKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++  +++I   L   + +   +GIWG+GG+GKTT+A  +Y  IS  F+   F+ NIR+
Sbjct: 197 VGMDIKLEDIYDLLDEEANDVRFIGIWGMGGLGKTTLARVVYEEISHRFDVRVFLANIRE 256

Query: 222 ESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
            S    GL  +                      +   +R L    VL+V  D+   +Q++
Sbjct: 257 VS-ATHGLVYLQKQILSQILKEENVKVWDVYSGITMTKRCLCNKAVLLVLDDVDQSEQLE 315

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G  D F   SR+IITTR++++L  H    V   +E+K L+ +++L LFS  AF +  
Sbjct: 316 HLVGEKDWFGLRSRIIITTRNLRVLVTHG---VEKPYELKRLNKDEALQLFSWKAFRKCE 372

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P     EL    + YA G+PLAL+ LGS+L   S   W SA+ KL++ P+  + ++LK+S
Sbjct: 373 PEEDNAELCKSFVTYAGGLPLALKTLGSFLYKRSLHSWSSALQKLQQTPNRSVFEILKLS 432

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
           +DGLD+ E+ IFLD ACF +  D   ++  + +  F  +I I  LV KSL+TI S+N++ 
Sbjct: 433 FDGLDEMEKKIFLDIACFRRLYDNESMIEQVHSFDFCPRITIDVLVEKSLLTISSDNRVD 492

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI----------- 486
           +HDL+ EMG EIVRQE+ K+PG RSRL    DI+ V  +NT      GI           
Sbjct: 493 VHDLIHEMGCEIVRQEN-KEPGGRSRLCLRNDIFHVFTKNTGTEAIEGILLHLAELEEAD 551

Query: 487 -NLDS------LKELYLGGCS---------------NLKRFPEISC-------NIEDLDL 517
            NL++      LK LY+                   N   +P  S         + +L L
Sbjct: 552 WNLEAFSKMCKLKLLYIHNLRLSLGPIYLPNALRFLNWSWYPSKSLPPCFQPDKLTELSL 611

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
             + I+ L +    L  L  +DL++   L + +     + +L +L L GC+ L K+   I
Sbjct: 612 VHSNIDHLWNGKKYLGNLKSIDLSDSINL-TRTPDFTGIPNLEKLILEGCISLVKIHPSI 670

Query: 578 GNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTS 636
            +L+ L+  N    K  + +PS +  +  L    +  C +L+ +PE    +   ++ C  
Sbjct: 671 ASLKRLKIWNFRNCKSIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIG 729

Query: 637 LKTLSNSSTLLTRSSK 652
              + N  +   R S+
Sbjct: 730 GSAVENLPSSFERLSE 745



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 109/228 (47%), Gaps = 40/228 (17%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR ++W+  +   +     SLP+ +N++ L+   + GCS LK  PE    +  +  L + 
Sbjct: 674 KRLKIWNFRNCKSI----KSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIG 729

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNC----------------------------SGLKSV 549
            +A+E LPSS   LS  LV+LDL                                 L  +
Sbjct: 730 GSAVENLPSSFERLSESLVELDLNGIVIREQPYSLFLKQNLRVSFFGLFPRKSPCPLTPL 789

Query: 550 SSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            + L +  SL +L L+ C   E ++P +IG L SLE L L   +F  +P+S+  LSKL  
Sbjct: 790 LASLKHFSSLTQLKLNDCNLCEGEIPNDIGYLSSLELLQLIGNNFVNLPASIHLLSKLKR 849

Query: 609 LRLQNCKRLQSLPELPCGSSIH--ARHCTSLKTLSNSSTLLTRSSKHW 654
           + ++NCKRLQ LPELP    +     +CTSL+   +    L+R  + W
Sbjct: 850 INVENCKRLQQLPELPATDELRVVTDNCTSLQVFPDPPN-LSRCPEFW 896


>gi|451799084|gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis labrusca]
          Length = 1514

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 257/761 (33%), Positives = 370/761 (48%), Gaps = 168/761 (22%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE       
Sbjct: 20  YDVFLSFRGGDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIE------- 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
                   SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 73  -------ESRWCLNELVKIIERKSQKESVVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 125

Query: 125 -------MGIFDIPTSESVLIEG-NVNDI--SKKLSDLFPSDNKDQLVGVESIIKEIESQ 174
                  +  + I   ++  + G +VND   ++ L   + ++   ++V  ++II+ +  Q
Sbjct: 126 NQEKKEMIQKWRIALRKAANLSGCHVNDQLKTESLQHWYETEVVKEIV--DTIIRRLNHQ 183

Query: 175 LLS------------------GSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGS 213
            LS                   +TE N V + GI GIG   KTTIA AIY+ IS  ++GS
Sbjct: 184 PLSVGKNIVGIGVHLEKLKSLMNTELNMVSVVGIYGIGGVGKTTIAKAIYNEISHQYDGS 243

Query: 214 YFMQNIRDES---------EKVGGL---ANIHLN-------FERRRLSRMKVLIVFYDLT 254
            F+ NI++ S         E + G+    N  +N         +R LS  +VL++F D+ 
Sbjct: 244 SFLINIKERSKGDILQLQQELLHGILRGKNFKINNVDEGISMIKRCLSSNRVLVIFDDVD 303

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           +LKQ++ L    D F   S +IIT+RD  +L  + G+ +   +EV +L+  +++ LFS  
Sbjct: 304 ELKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQY-GADIR--YEVSKLNKEEAIELFSLW 360

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF QN P   +  LS  +I YANG+PLAL+VLG+ L G     WESA+ KLK MPHM+I 
Sbjct: 361 AFKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGKKISNWESALCKLKIMPHMEIH 420

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            VL++S+DGLDD ++ IFLD ACFFKG+D+  V   L      AK  I+ L  + L+T+S
Sbjct: 421 NVLRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRILGP---HAKHAITTLDDRCLITVS 477

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------------ 482
            N + MHDL+Q+MG EI+RQE  +DPG+RSRL    + Y VL  N               
Sbjct: 478 KNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLC-DSNAYHVLTGNKGTRAIEGLFLDRCK 536

Query: 483 --PTGINLDSLKE---LYLGGCSNLKR-----------FPEISCNIEDLDLKETAIEELP 526
             P+ +  +S KE   L L    N +R           F   S  +  L      +E LP
Sbjct: 537 FNPSELTTESFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEFYSYELAYLHWDGYPLESLP 596

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSS--------RLCNLK---------------SLRRLN 563
            +  +   LV+L L + S +K V          R+ +L                +L  L 
Sbjct: 597 MNF-HAKNLVELSLRD-SNIKQVWRGNKLHDKLRVIDLSHSVHLIRIPDFSSVPNLEILT 654

Query: 564 LSGCLKLEKLPEEI------------------------GNLESLEYLNLAEKDFEKIPSS 599
           L GC+ LE LP  I                        G++  L  L+L+      +PSS
Sbjct: 655 LEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSS 714

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
           +  L+ L  L LQ C +L  +P        H  H +SLK L
Sbjct: 715 ITHLNGLQTLLLQECLKLHQIPN-------HICHLSSLKEL 748



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 104/223 (46%), Gaps = 52/223 (23%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            TSLP+ I    SL  L   GCS L+ FPEI  ++E L    L  TAI+E+PSSI  L  L
Sbjct: 1118 TSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGL 1177

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD--- 592
              L L NC  L ++   +CNL S + L +S C    KLP+ +G L+SLEYL +   D   
Sbjct: 1178 QYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMN 1237

Query: 593  --------------------------------------------FEKIPSSMKQLSKLSD 608
                                                        F +IP  + QL  L +
Sbjct: 1238 FQLPSLSGLCSLRTLKLQGCNLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLEN 1297

Query: 609  LRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
            L L +CK LQ +PELP G   + A HCTSL+ LS+ S LL  S
Sbjct: 1298 LYLGHCKMLQHIPELPSGLFCLDAHHCTSLENLSSRSNLLWSS 1340



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP GI     L+ L   GCS L+RFPEI  ++ +L   DL  TAI +LPSSI +L+ L  
Sbjct: 664 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQT 723

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKI 596
           L L  C  L  + + +C+L SL+ L+L  C  +E  +P +I +L SL+ LNL +  F  I
Sbjct: 724 LLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSI 783

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P+++ QLS+L  L L +C  L+ +PELP
Sbjct: 784 PTTINQLSRLEVLNLSHCNNLEQIPELP 811



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 13/135 (9%)

Query: 506  PEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
            P   C  +  D+ E  I E P  + +L       L +C  L S+ S +   KSL  L+ S
Sbjct: 1083 PRRKCCFKGSDMNEVPIIENPLELDSLC------LRDCRNLTSLPSSIFGFKSLATLSCS 1136

Query: 566  GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            GC +LE  PE + ++ESL  L L     ++IPSS+++L  L  L L+NCK L +LPE  C
Sbjct: 1137 GCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESIC 1196

Query: 626  GSSIHARHCTSLKTL 640
                   + TS KTL
Sbjct: 1197 -------NLTSFKTL 1204


>gi|13509234|emb|CAC35337.1| Nbi-C protein [Linum usitatissimum]
          Length = 1107

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 239/773 (30%), Positives = 378/773 (48%), Gaps = 139/773 (17%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGS 69
           +P  ++++FLSFRG DVR  F  HL  +L R K  TF D++ L +G  I PS+  AI  S
Sbjct: 26  LPSGEYEIFLSFRGSDVRKTFADHLYTSLVRSKFRTFRDEEELRKGGAIGPSIIRAITES 85

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDPSDAGYCPSLGW 124
           KI I I +  YASS+WCL EL K++E     G      I++PVF  VDP D  +  S  +
Sbjct: 86  KIYIPILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRDVRHTESGSY 145

Query: 125 MGIFDIPTS----ESVL-------------------IEGNVNDISKKLSDL---FPSDNK 158
              F+  +     E+VL                    +G+ + I K L+++     ++ K
Sbjct: 146 KEAFEQHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEVELHLRANYK 205

Query: 159 ---DQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
              D+LVG++S++ E+   L L  S     +GI G+GG+GKTT+A A+Y  + + FE  +
Sbjct: 206 LVTDELVGIDSLVDEVVGLLNLDSSASEKIIGIHGMGGLGKTTLAKAVYDKVFTRFERCF 265

Query: 215 FMQNIRDE-SEKVGGL--------------------ANIHLNFERRRLSRMKVLIVFYDL 253
           F++NIRD  SEK G L                    A+  +   R R+ R K+LIV  D+
Sbjct: 266 FLENIRDTLSEKNGVLIMQNKIISGILRKDFNEAKYASDGIRIIRDRVCRHKLLIVLDDV 325

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            +  Q D ++G+L+ F   SR +ITTRD + L+  R  ++   FE++E+S + SLTLF++
Sbjct: 326 DEKFQFDEVLGKLNNFSMDSRFLITTRDARGLELLRECKM---FELQEMSPDHSLTLFNK 382

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           NAFG   P   +  LSN  ++ A G+PL ++V+GS L  M +  WE  + +LK++    +
Sbjct: 383 NAFGAEFPPEDYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEELKKISPTKV 442

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           Q+ LK+SY+ L   E+ IFLD AC+F G  +   +     C F  +  I  L  +SL+ +
Sbjct: 443 QERLKISYNELTHNEKQIFLDIACYFIGLSKIEPILMWSDCDFYPESTIRYLTQRSLIKL 502

Query: 434 SN--------NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS---- 481
                     N   MH+ ++++G  IVR+E+ ++P KRSR+W  +D   +L         
Sbjct: 503 QRSEVKGDDINTFQMHNHVRDLGRAIVREENNQNPYKRSRIWSNKDAIDMLKHKKGTDCV 562

Query: 482 ------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLKETAIEELP 526
                       + T   L+ L  L     SN +    F ++  N+  L L   + + +P
Sbjct: 563 EVLTVDMEGEDLILTNKELEKLTRLRYLSVSNARLAGDFKDVLPNLRWLRLH--SCDSVP 620

Query: 527 SSIGNLSRLVDLDLTNCS---------------GLKSVSSRLC----------------- 554
           + +  L++LVDL+L +CS                LK+V+   C                 
Sbjct: 621 TGL-YLNKLVDLELVDCSVRDGWKGWNELKVAHKLKAVTLERCFHLKKVPDFSDCGDLEF 679

Query: 555 ----------------NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
                           N KSLR L +S   K+ K+  EIG L +L+YL  +    +++P+
Sbjct: 680 LNFDGCGNMHGEVDIGNFKSLRFLMISNT-KITKIKGEIGRLVNLKYLIASNSSLKEVPA 738

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSS 651
            + +LS L  L L      +S       +S+    C +L++LSN S L+  S+
Sbjct: 739 GISKLSSLEWLYLTLTDPYKSDFTETLPASLTLLSCENLQSLSNLSNLINLST 791



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 13/152 (8%)

Query: 478  ENTSLPTGIN-----LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEE-LPSSI 529
            E+  L T IN      +SL +L + GCS L     +     +  L L    I E +PSS+
Sbjct: 863  EDCPLVTEINGVGQRWESLSDLKVVGCSALIGLEALHSMVKLRSLILMGAKITETVPSSL 922

Query: 530  GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
               ++L  L L  C   +     L NLK+LR L +  CL+L ++P  +  LESLEYL+L+
Sbjct: 923  SMFTQLTTLGL--CFMSQEQFPNLSNLKNLRELGMDYCLELIEVPG-LDTLESLEYLSLS 979

Query: 590  E-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
              +   K+P  +  + KL  L ++ C +L+ +
Sbjct: 980  GCQSIRKVP-DLSGMKKLKTLDVEGCIQLKEV 1010


>gi|297742842|emb|CBI35600.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 209/523 (39%), Positives = 287/523 (54%), Gaps = 57/523 (10%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS SS  ++     HDVFLSFRG+D R++F  HL  AL  + I TF D+KL RG +I+P
Sbjct: 1   MASDSSPFDL--RWTHDVFLSFRGEDTRYDFTDHLYNALVGKGIITFRDEKLKRGEKIAP 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
            L +AIE S+ SIV+FS+ YA SRWCL+EL KI+E   KY QIV P+FY VDPSD     
Sbjct: 59  KLLNAIEKSRSSIVVFSKTYADSRWCLDELAKIIECSRKYRQIVFPIFYHVDPSDVRKQT 118

Query: 116 -----AGYCPSLGWMGIFDIPTSESVLIEG------NVND-------------ISKKLSD 151
                A       W     + +    L E       +VN+             I+ ++ +
Sbjct: 119 GRFGEAFTKYEENWKN--KVQSWREALTEAGNLSGWHVNEGYESEHIKKITTTIANRILN 176

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
             P    D LVG++S  K+I   L   S + + VGI GIGGIGKTTIA  IY+ IS  FE
Sbjct: 177 CKPLFVGDNLVGMDSHFKKISLGLHMESNDVHMVGICGIGGIGKTTIARYIYNQISQGFE 236

Query: 212 GSYFMQNIRDESEKVG------------------GLANIHLNFE--RRRLSRMKVLIVFY 251
            + F+++ +   +K G                   ++NI    +  +  L   K LIV  
Sbjct: 237 CNSFLEDAKKVYKKKGLARLQKLLLNDIQKGENSKISNIQQGAQVIQNSLYHRKALIVLD 296

Query: 252 DLTDLKQID-LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
           D+ D       L+G    +  GSR+IITTRD + L       V +V+ V+ L  N++  L
Sbjct: 297 DVDDDMDNLDFLVGNHAWYGEGSRIIITTRDKRCLTM---LNVNYVYNVEGLDSNEAFEL 353

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
           FSR+AF  N P   F    N VI Y  G+PLAL+VLGS L G ++ EW S ++KL++ P 
Sbjct: 354 FSRHAFRSNLPKEDFRIFLNPVINYCEGLPLALKVLGSLLCGKTKGEWTSELHKLEKEPE 413

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
           M I  VLK+S+DGLD  +Q I LD ACFF+G D+       D      +I I  L+ + L
Sbjct: 414 MKIHNVLKISFDGLDTTQQMILLDIACFFQGEDKDFASKIWDGYELYGEINIGVLLERCL 473

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           +TIS N++ MH L+++M  +IVR++  KD  K SRLW+P+DIY
Sbjct: 474 ITISYNRLRMHGLIEKMCKKIVREQHGKDTSKWSRLWNPDDIY 516


>gi|15222558|ref|NP_176572.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325006|gb|AAG52448.1|AC010852_5 putative disease resistance protein; 24665-28198 [Arabidopsis
           thaliana]
 gi|332196042|gb|AEE34163.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 243/736 (33%), Positives = 354/736 (48%), Gaps = 107/736 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS SS  +   + K +VF SF G DVR   +SH+     R  I  F D K+ R   I P
Sbjct: 1   MASPSSFSSQ--NYKFNVFASFHGPDVRKTLLSHIRLQFNRNGITMFDDQKIVRSATIGP 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
           SL  AI+ S+ISIVI S+ YASS WCL+ELV+ILE K   GQIV+ +FY VDPSD     
Sbjct: 59  SLVEAIKESRISIVILSKKYASSSWCLDELVEILECKKAMGQIVMTIFYGVDPSDVR--K 116

Query: 121 SLGWMGI-------------------------------FDIPTSESVLIEGNVNDISKKL 149
            +G  GI                               F    +E+++IE    D+  KL
Sbjct: 117 QIGKFGIAFNETCARKTEEERQKWSKALNQVSNIAGEDFLRWDNEAIMIEKIARDVLDKL 176

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
           +   PS + D +VG+E+ ++EI+S L   + E   V I G  GIGKTTIA A+Y  +S  
Sbjct: 177 NAT-PSRDFDGMVGIEAHLREIKSLLDLDNVEVKIVAIAGPAGIGKTTIARALYGLLSKR 235

Query: 210 FEGSYFMQNIR-------DES-----------EKV---GGLANIHLNFERRRLSRMKVLI 248
           F+ S F+ N+R       DE             KV    G+   HL   +  LS  +VLI
Sbjct: 236 FQLSCFVDNLRGSYHSGFDEYGFKLHLQEQFLSKVLNQSGMRICHLGAIKENLSDQRVLI 295

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           +  D+  LKQ++ L      F PGSR+++TT + +LL+ H    + + + V   S  D+L
Sbjct: 296 ILDDVNKLKQLEALANETTWFGPGSRIVVTTENKELLQQHG---INNTYHVGFPSDEDAL 352

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            +    AF Q  P  GF ELS  V K    +PL L V+GS L+G  E+EWE  V +L+ +
Sbjct: 353 KILCSYAFKQTSPRHGFEELSESVTKLCGKLPLGLCVVGSSLRGKKEDEWEDVVTRLETI 412

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
              DI+ VL+V Y+ LD+  Q +FL  A FF   D  LV           K G+  L  +
Sbjct: 413 LDQDIEDVLRVGYESLDENAQTLFLHIAIFFNKEDGDLVKTMFAESDLDVKYGLKILENR 472

Query: 429 SLVTIS-----NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP 483
           SL+ +      + KI MH LLQ+MG   ++++   +P +R  L    +I  VL       
Sbjct: 473 SLIKMKIFSNGDTKIVMHRLLQQMGKRAIQKQ---EPWERQILIDAREICHVLEHAKG-- 527

Query: 484 TGINLD------------SLKELYLGGCSNLK---------------RFPE---ISCNIE 513
           TG N+             S+++       NL+                 PE     C + 
Sbjct: 528 TGWNVHGMSFDISRISEVSIRKKAFKRMPNLQFLKVYKSKDDGNNRMHVPEEMDFPCLLR 587

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            LD K    + LP +  N   LV+L++ + S L+ +      LK+L++++LS    L++L
Sbjct: 588 LLDWKAYPSKSLPPTF-NPEHLVELNM-HSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQL 645

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSI 629
           P ++ N  +LEYL L   +   +IPSS+  L KL  L    C  L+ +P    L    ++
Sbjct: 646 P-DLSNATNLEYLYLMGCESLIEIPSSISHLHKLEMLATVGCINLEVIPAHMNLESLQTV 704

Query: 630 HARHCTSLKTLSNSST 645
           +   C+ L+ +   ST
Sbjct: 705 YLGGCSRLRNIPVMST 720



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 30/202 (14%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA----IEELPSSIGNLSRLVD 537
           LP   N  +L+ LYL GC +L   P    ++  L++  T     +E +P+ + NL  L  
Sbjct: 645 LPDLSNATNLEYLYLMGCESLIEIPSSISHLHKLEMLATVGCINLEVIPAHM-NLESLQT 703

Query: 538 LDLTNCSGLKSVSSRLCNLK----------------SLRRLNLSGCLKLEKLPEEIGNLE 581
           + L  CS L+++     N++                 L+ L++SG    + L   +    
Sbjct: 704 VYLGGCSRLRNIPVMSTNIRYLFITNTAVEGVPLCPGLKTLDVSGSRNFKGLLTHLPT-- 761

Query: 582 SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
           SL  LNL   D E+IP   K L +L  + L+ C+RL SLPELP    ++ A  C SL+T+
Sbjct: 762 SLTTLNLCYTDIERIPDCFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADDCESLETV 821

Query: 641 SNSSTLLTRSSKHWDIFNFSNC 662
                 L  S      F+F+NC
Sbjct: 822 FCPLNTLKAS------FSFANC 837


>gi|12003378|gb|AAG43546.1|AF211528_1 Avr9/Cf-9 rapidly elicited protein 4 [Nicotiana tabacum]
          Length = 536

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 210/537 (39%), Positives = 301/537 (56%), Gaps = 70/537 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MASSSS+        +DVFLSFRG+D R  F SHL   L    I+TF DDK L  G  IS
Sbjct: 1   MASSSSA-----RWSYDVFLSFRGEDTRKTFTSHLYEVLNDRGIKTFQDDKRLEYGATIS 55

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
             L  AIE S+ SIVIFS+ Y +SRWC+NELVKI+E K ++GQIV+P+FY VDPS     
Sbjct: 56  EELCKAIEESQFSIVIFSKNYTTSRWCMNELVKIMECKTQFGQIVIPIFYDVDPSHVRNQ 115

Query: 116 ------------AGYCPSLGWMGIFDIPTSESVLIEGN---------------VNDISKK 148
                         Y   +  +  + I  + +  ++G+               V  IS K
Sbjct: 116 KESFAKAFEEHVTKYKDDVEGIQRWRIALTAAANLKGSCDNRDKTDAECIRHIVGQISSK 175

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI-- 206
           L  +  S  ++ +VG+++ +++IES L  G  +   +G+WG+GG+GKTTIA A++  +  
Sbjct: 176 LCKISLSYLQN-IVGIDTHLEKIESLLEIGINDVRIMGMWGMGGVGKTTIARAMFDTLLG 234

Query: 207 ----SSHFEGSYFMQNIRDESEKVGGLANIHL--------NFERR---------RLSRMK 245
               S  F+G+ F+++I++   ++  L NI L        N++           RL   K
Sbjct: 235 RRDSSYQFDGACFLKDIKENKHRMHSLQNILLSNLLREKANYKNEEDGKHQMASRLRSKK 294

Query: 246 VLIVFYDLTDLKQ-IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           VLIV  D+ D    ++ L G LD F  GSR+I+TTRD  L+      +   ++EV  L  
Sbjct: 295 VLIVLDDIDDKDHYLEYLAGDLDWFGNGSRIIVTTRDKHLI-----GKNDVIYEVTALPD 349

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           ++S+ LF ++AF +  P   F ELS  V+ Y  G+PLAL VLGS L       W+SA+ +
Sbjct: 350 HESIQLFYQHAFKKEDPDECFKELSLEVVNYTKGLPLALGVLGSSLYNRDITVWKSAIEQ 409

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           +K  P+  I + LK+SYDGL+  +Q IFLD ACFF+G  +  +M  L +C F A+ G+  
Sbjct: 410 MKNNPNSKIVEKLKISYDGLESTQQEIFLDIACFFRGKKKDDIMQVLKSCHFGAEYGLDV 469

Query: 425 LVGKSLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           L+ KSLV I+ + +I MHDL+QEMG  IV  +  KD GK SRLW  +D  +V+  NT
Sbjct: 470 LIEKSLVFITEDGEIEMHDLIQEMGRYIVNLQ--KDLGKCSRLWLAKDFEEVMINNT 524


>gi|15227315|ref|NP_179279.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|3757516|gb|AAC64218.1| disease resistance protein (TIR-NBS-LRR class), putative
           [Arabidopsis thaliana]
 gi|330251451|gb|AEC06545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1109

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 239/726 (32%), Positives = 355/726 (48%), Gaps = 117/726 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS        + VF SF G DVR +F+SH         I  F D K+ R   I+P
Sbjct: 1   MASSSSSRTW----NYRVFASFHGPDVRKSFLSHFRKQFICNGITMFDDQKIVRSQTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           SL+  I  SKISIVI S+ YASS WCLNEL++IL+ +   GQIV+ VFY VDPSD     
Sbjct: 57  SLTQGIRESKISIVILSKNYASSTWCLNELLEILKCREDIGQIVMTVFYGVDPSDVRKQT 116

Query: 117 --------------------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSD 151
                                +  +L  +G      F    +E+ +IE    D+S+KL +
Sbjct: 117 GEFGTVFNKTCARRTEKERRNWSQALNVVGNIAGEHFLNWDNEAEMIEKIARDVSEKL-N 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI-SSHF 210
           + PS + D +VG+E+ +KE+E  L         VGI+G  GIGKTTIA A++S +    F
Sbjct: 176 MTPSSDFDGMVGIEAHLKEMEVLLDFDYDGVKIVGIFGPAGIGKTTIARALHSLLLFKKF 235

Query: 211 EGSYFMQNIRDESEKVG----------------------GLANIHLNFERRRLSRMKVLI 248
           + + F+ N+R  S  +G                      G+   HL   + RL  MKVLI
Sbjct: 236 QLTCFVDNLRG-SYPIGIDEYGLKLRLQEHLLSKILNQDGMRISHLGAVKERLCDMKVLI 294

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           +  D+ D+KQ++ L      F PGSRVI+TT + ++L+ H    + +++ V   S   ++
Sbjct: 295 ILDDVNDVKQLEALANDTTWFGPGSRVIVTTENKEILQRHG---IDNMYHVGFPSDEKAM 351

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            +    AF Q+ P  GF  L+  V      +PL L+V+GS L+G  E+EW+S + +L  +
Sbjct: 352 EILCGYAFKQSSPRPGFNYLAQKVTWLCGNLPLGLRVVGSSLRGKKEDEWKSVIRRLDTI 411

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
              DI+ VL+V Y+ L + EQ++FL  A FF   D  LV   L         G+  LV K
Sbjct: 412 IDRDIEDVLRVGYESLHENEQSLFLHIAVFFNCKDVDLVKAMLADDNLDIAHGLKILVNK 471

Query: 429 SLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTG 485
           SL+ IS   +I MH LLQ++G + + ++   +P KR  L + ++I  VL  ++ T + +G
Sbjct: 472 SLIYISTTGEIRMHKLLQQVGRQAINRQ---EPWKRLILTNAQEICYVLENDKGTGVVSG 528

Query: 486 INLDS-------LKELYLGGCSNL------------------------------------ 502
           I+ D+       L    L   SNL                                    
Sbjct: 529 ISFDTSGISEVILSNRALRRMSNLRFLSVYKTRHDGNNIMHIPEDMKFPPRLRLLHWEAY 588

Query: 503 --KRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
             K  P   C  N+ +L++K++ +E+L      L+ L  +DL+    LK +   L N  +
Sbjct: 589 PSKSLPLGFCLENLVELNMKDSQLEKLWEGTQLLTNLKKMDLSRSVHLKELPD-LSNATN 647

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK-DFEKIPSSMKQLSKLSDLRLQNCKRL 617
           L RL L  C  L +LP+ IGNL  LE L +A     E IP+ +  L+ L  + +  C RL
Sbjct: 648 LERLELCDCRALVELPKSIGNLHKLENLVMANCISLEVIPTHI-NLASLEHITMTGCSRL 706

Query: 618 QSLPEL 623
           ++ P+ 
Sbjct: 707 KTFPDF 712



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 34/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ + + GCS LK FP+ S NIE L L  T++EE+P+SI + S L D  + 
Sbjct: 686 IPTHINLASLEHITMTGCSRLKTFPDFSTNIERLLLIGTSVEEVPASIRHWSSLSDFCIK 745

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           N   LKS                     L   PE++      E L+L+  D EKIP  +K
Sbjct: 746 NNEDLKS---------------------LTYFPEKV------ELLDLSYTDIEKIPDCIK 778

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIH-ARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
               L  L +  C++L SLPELP    +  A  C SL+ +  +  L T S++     NF+
Sbjct: 779 GFHGLKSLDVAGCRKLTSLPELPMSLGLLVALDCESLEII--TYPLNTPSAR----LNFT 832

Query: 661 NC 662
           NC
Sbjct: 833 NC 834


>gi|297811235|ref|XP_002873501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319338|gb|EFH49760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  298 bits (763), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 232/747 (31%), Positives = 356/747 (47%), Gaps = 160/747 (21%)

Query: 41  REKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY 100
           R  I  FID+++ RG  I P L  AI  S+IS+++ S+ YASS+WCL+ELV+I++ + + 
Sbjct: 5   RMGITPFIDNEIKRGESIGPELIRAIRESRISVILLSKNYASSKWCLDELVEIMKCREEL 64

Query: 101 GQIVVPVFYLVDPSD-------------------------------------AGYCPSLG 123
           GQ VV +FY VDPS+                                     AGY  S  
Sbjct: 65  GQTVVAIFYKVDPSEVKKLIGNFGQVFRKTCAGKTKEDIGRWREALAKVATIAGYHSS-N 123

Query: 124 WMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFN 183
           W        +E+ +I+  V DIS  L++   S + D LVG+ + ++++E  L   S E  
Sbjct: 124 W-------DNEAAMIKKIVTDISNMLNNSISSSDFDGLVGMRAHLEKMEPLLCLESDEVR 176

Query: 184 TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR---------DESEKV-------- 226
            +GIWG  GIGKTTIA  +Y+  S+ F+   F+ NI+         D S K+        
Sbjct: 177 MIGIWGPPGIGKTTIARVVYNQFSNSFQLGVFLDNIKANYTRPCSDDYSSKLQLQKHFMS 236

Query: 227 -----GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRD 281
                  +   HL   + RL   KVL+V   +    Q+D ++     F PGSR+IITT+D
Sbjct: 237 QIINHKDMEIFHLGVAQDRLKDKKVLVVLDGVNQSVQLDAMVKETWWFGPGSRIIITTQD 296

Query: 282 VQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPL 341
            +L + H    + H+++V     +++L +F   AFGQ  P  GF EL+  V  +A  +PL
Sbjct: 297 HRLFRAHG---INHIYQVDFPPADEALQIFCMYAFGQKSPKDGFEELAWEVTTFAGKLPL 353

Query: 342 ALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF-- 399
            L+VLGS+ +GMS++EW  ++ +LK     DIQ +LK SYD LDDE++++FL  ACFF  
Sbjct: 354 GLRVLGSHFRGMSKQEWIKSLPRLKTSLDTDIQSILKFSYDALDDEDKDLFLHIACFFNY 413

Query: 400 ---KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQE 455
              +  +++L   FL+      +  ++ L  KSL+  +   +I MH LL+++G EIVR+ 
Sbjct: 414 GVIEKVEEHLARKFLE-----VRQRLNVLSQKSLILFNQCGRIEMHSLLEKLGREIVRKL 468

Query: 456 SIKDPGKRSRLWHPEDIYQVLNENTSLP---TGINLD--------SLKELYLGGCSNLK- 503
           SI DPG+R  L    +I +VL  + +      GI+L+        ++ E    G  NL+ 
Sbjct: 469 SIHDPGQRQFLVDEREICEVLISDAAGSKSIIGIDLNYRGIGEELNISERAFEGMCNLQF 528

Query: 504 -----------------------------RFPEISC-----NIE---DLDLKETAIEELP 526
                                         FP ++C     N+E   +L +  + +E+L 
Sbjct: 529 LRIDGDCNTLQLSQGLNYFSRKLRILHWSYFP-MACLPSNVNLEFLVELIMDNSKLEKLW 587

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
             I  L  L  +D+ + + LK +        +L++LNLS C  L KLP  IGN  +L+ L
Sbjct: 588 EGIKPLRNLKRMDMRDSANLKELPD-FSTATNLQKLNLSYCSSLIKLPSSIGNATNLKKL 646

Query: 587 NLAE-------------------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           NL                            +  ++P  +K L KL  LRL  C +LQ LP
Sbjct: 647 NLRRCSNIMEFPSFIEKATNLEILDLSSCSNLVELPLFIKNLQKLQKLRLGGCSKLQVLP 706

Query: 622 ---ELPCGSSIHARHCTSLKTLSNSST 645
               L     +    C++LK     ST
Sbjct: 707 TNINLESLVELDLTDCSALKLFPEIST 733



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT INL+SL EL L  CS LK FPEIS N+  L L ETAIEE+P SI    RL +L ++
Sbjct: 705 LPTNINLESLVELDLTDCSALKLFPEISTNVRVLKLSETAIEEVPPSIAFWPRLDELHMS 764

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK +   LC                           S+  L L++ + +++PS +K
Sbjct: 765 YFENLKELPHALC---------------------------SITDLYLSDTEIQEVPSLVK 797

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           ++S+L  L L+ C++L+SLP++P   S I A  C SL+ L  S
Sbjct: 798 RISRLDRLVLKGCRKLESLPQIPESLSIIDAEDCESLERLDCS 840


>gi|297794601|ref|XP_002865185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311020|gb|EFH41444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1185

 Score =  298 bits (763), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 229/720 (31%), Positives = 353/720 (49%), Gaps = 97/720 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G+DVR  F+SH    L R+ I  F D+++ R   + P L  AI  S+I++V+
Sbjct: 13  YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRSSRIAVVV 72

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYC---- 119
           FSE Y SS WCL+EL++I+  K + GQ+V+PVFY +DPS             A  C    
Sbjct: 73  FSEKYPSSSWCLDELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGQFGEAFAKTCQRKT 132

Query: 120 ---PSLGWMGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                L    + D+            SE+ +IE   N++  KL +  PS + +  VG+E 
Sbjct: 133 EDETKLWRQSLTDVANVLGYHSQNWPSEAKMIEAIANNVLGKL-NFTPSKDFEDFVGMED 191

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ--------- 217
            I ++   L   S E   VGIWG  GIGKT+IA A+Y+ +S  F+GS F+          
Sbjct: 192 HIAKMSVLLNLESEEVRMVGIWGSSGIGKTSIARALYNQLSRRFQGSVFIDRAFVTKSKS 251

Query: 218 -----NIRDESEKVGGLANI-------------HLNFERRRLSRMKVLIVFYDLTDLKQI 259
                N  D + K+  L +              HL      L+R KVLI   D+ D   +
Sbjct: 252 NYESANPDDYNMKLYLLRSFLSEILDKKNVRINHLGAAEETLNRRKVLIFIDDMDDQVVL 311

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           D L G+   F  GSR+I+ T+D   L+ HR   + H++EV   S + +L +F R+AF +N
Sbjct: 312 DTLAGQAQWFGCGSRIIVITKDKHFLRAHR---IDHIYEVCLPSKDLALKIFCRSAFKKN 368

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  G ++L++ V   A  +PL L+VLGSYL+G  +E+    + +L+      I+K L+V
Sbjct: 369 SPPEGLMDLASEVALCAGNLPLGLKVLGSYLRGRDKEDLMDMLPRLRNSLDGKIEKTLRV 428

Query: 380 SYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           SYDGL+D +++ IF   AC F G     +   L        IG+  LV KSL+ +    +
Sbjct: 429 SYDGLNDKKDKAIFRHIACLFNGEKANDIKLLLADSGLDVNIGLKNLVDKSLIHVRKEIV 488

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKEL 494
            MH LLQEMG EIVR +S  +PG+R  L   ++I  +L +NT     L   +++D + EL
Sbjct: 489 EMHSLLQEMGKEIVRAQS-NEPGEREFLVDAKEICDLLEDNTGTKKVLGISLDMDEIDEL 547

Query: 495 YL--GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
           ++       ++    +    +  D K      LP     L   + L   +   ++ + S 
Sbjct: 548 HIHENAFKGMRNLIFLKFYTKKWDQKNEVRWHLPEGFNYLPHKLRLLRLDGYPMRHMPSN 607

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS------------- 598
               ++L  L++ G  KLE+L E +  L+ L+ +NL   K+ ++IP+             
Sbjct: 608 F-RTENLVELHMPGS-KLERLWEGVQELKGLKTINLHRSKNLKEIPNLSMATNLEELHLG 665

Query: 599 ----------SMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
                     S++ L+KL  L +  C  L+ LP    L    S++ + C+ LK   N ST
Sbjct: 666 DCSSLVELSSSVQYLNKLKSLVMSGCINLEILPTGINLQSLFSLNLKGCSGLKIFPNIST 725



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 1/87 (1%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGIN   L+ L L GCS LK FP IS NIE L L+ T IEE+P  I   ++L  + +
Sbjct: 817 TLPTGINFHHLESLNLSGCSRLKTFPNISTNIEQLYLQRTGIEEVPWWIEKFTKLDYITM 876

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C+ L  VS  +  LK L  ++ S C
Sbjct: 877 EKCNNLIRVSLNIYKLKRL-MVDFSDC 902



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 82/170 (48%), Gaps = 26/170 (15%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPTGINL SL  L L GCS LK FP IS NI  L L ET+IEE PS++            
Sbjct: 697 LPTGINLQSLFSLNLKGCSGLKIFPNISTNISWLILDETSIEEFPSNL------------ 744

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLK--LEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
                  +   +C +KS +  +    L   +  LP       SLE L L++      IPS
Sbjct: 745 --RLDNLLLLSMCRMKSQKLWDRKQPLTPLMAMLP------HSLEELFLSDIPSLVDIPS 796

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           S++  + L  L +++C  L++LP         S++   C+ LKT  N ST
Sbjct: 797 SIQNFTHLDCLGIEDCINLETLPTGINFHHLESLNLSGCSRLKTFPNIST 846


>gi|39104607|dbj|BAC43641.2| putative disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  298 bits (762), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 243/736 (33%), Positives = 354/736 (48%), Gaps = 107/736 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MAS SS  +   + K +VF SF G DVR   +SH+     R  I  F D K+ R   I P
Sbjct: 1   MASPSSFSSQ--NYKFNVFASFHGPDVRKTLLSHIRLQFNRNGITMFDDQKIVRSATIGP 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
           SL  AI+ S+ISIVI S+ YASS WCL+ELV+ILE K   GQIV+ +FY VDPSD     
Sbjct: 59  SLVEAIKESRISIVILSKKYASSSWCLDELVEILECKKAMGQIVMTIFYGVDPSDVR--K 116

Query: 121 SLGWMGI-------------------------------FDIPTSESVLIEGNVNDISKKL 149
            +G  GI                               F    +E+++IE    D+  KL
Sbjct: 117 QIGKFGIAFNETCARKTEEERQKWSKALNQVSNIAGEDFLRWDNEAIMIEKIARDVLDKL 176

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
           +   PS + D +VG+E+ ++EI+S L   + E   V I G  GIGKTTIA A+Y  +S  
Sbjct: 177 NAT-PSRDFDGMVGIEAHLREIKSLLDLDNVEVKIVAIAGPAGIGKTTIARALYGLLSKR 235

Query: 210 FEGSYFMQNIR-------DES-----------EKV---GGLANIHLNFERRRLSRMKVLI 248
           F+ S F+ N+R       DE             KV    G+   HL   +  LS  +VLI
Sbjct: 236 FQLSCFVDNLRGSYHSGFDEYGFKLHLQEQFLSKVLNQSGMRICHLGAIKENLSDQRVLI 295

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           +  D+  LKQ++ L      F PGSR+++TT + +LL+ H    + + + V   S  D+L
Sbjct: 296 ILDDVNKLKQLEALANGTTWFGPGSRIVVTTENKELLQQHG---INNTYHVGFPSDEDAL 352

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            +    AF Q  P  GF ELS  V K    +PL L V+GS L+G  E+EWE  V +L+ +
Sbjct: 353 KILCSYAFKQTSPRHGFEELSESVTKLCGKLPLGLCVVGSSLRGKKEDEWEDVVTRLETI 412

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
              DI+ VL+V Y+ LD+  Q +FL  A FF   D  LV           K G+  L  +
Sbjct: 413 LDQDIEDVLRVGYESLDENAQTLFLHIAIFFNKEDGDLVKTMFAESDLDVKYGLKILENR 472

Query: 429 SLVTIS-----NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP 483
           SL+ +      + KI MH LLQ+MG   ++++   +P +R  L    +I  VL       
Sbjct: 473 SLIKMKIFSNGDTKIVMHRLLQQMGKRAIQKQ---EPWERQILIDAREICHVLEHAKG-- 527

Query: 484 TGINLD------------SLKELYLGGCSNLK---------------RFPE---ISCNIE 513
           TG N+             S+++       NL+                 PE     C + 
Sbjct: 528 TGWNVHGMSFDISRISEVSIRKKAFKRMPNLQFLKVYKSKDDGNNRMHVPEEMDFPCLLR 587

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            LD K    + LP +  N   LV+L++ + S L+ +      LK+L++++LS    L++L
Sbjct: 588 LLDWKAYPSKSLPPTF-NPEHLVELNM-HSSQLEYLWQGTQPLKNLKKMDLSQSKNLKQL 645

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSI 629
           P ++ N  +LEYL L   +   +IPSS+  L KL  L    C  L+ +P    L    ++
Sbjct: 646 P-DLSNATNLEYLYLMGCESLIEIPSSISHLHKLEMLATVGCINLEVIPAHMNLESLQTV 704

Query: 630 HARHCTSLKTLSNSST 645
           +   C+ L+ +   ST
Sbjct: 705 YLGGCSRLRNIPVMST 720



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 30/202 (14%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA----IEELPSSIGNLSRLVD 537
           LP   N  +L+ LYL GC +L   P    ++  L++  T     +E +P+ + NL  L  
Sbjct: 645 LPDLSNATNLEYLYLMGCESLIEIPSSISHLHKLEMLATVGCINLEVIPAHM-NLESLQT 703

Query: 538 LDLTNCSGLKSVSSRLCNLK----------------SLRRLNLSGCLKLEKLPEEIGNLE 581
           + L  CS L+++     N++                 L+ L++SG    + L   +    
Sbjct: 704 VYLGGCSRLRNIPVMSTNIRYLFITNTAVEGVPLCPGLKTLDVSGSRNFKGLLTHLPT-- 761

Query: 582 SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
           SL  LNL   D E+IP   K L +L  + L+ C+RL SLPELP    ++ A  C SL+T+
Sbjct: 762 SLTTLNLCYTDIERIPDCFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADDCESLETV 821

Query: 641 SNSSTLLTRSSKHWDIFNFSNC 662
                 L  S      F+F+NC
Sbjct: 822 FCPLNTLKAS------FSFANC 837


>gi|224062607|ref|XP_002300860.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222842586|gb|EEE80133.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 533

 Score =  298 bits (762), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 210/521 (40%), Positives = 290/521 (55%), Gaps = 59/521 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG D R  F  HL +AL RE I TF D ++++ G EI P     IE S+ SI
Sbjct: 14  EYDVFLSFRGADTRSGFTDHLYSALSREGIHTFRDANEIDIGEEIGPECLQGIEKSRFSI 73

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------G 117
           VI S+GYASS WCL+ELV IL  + K G  V PVFY +DPSD                  
Sbjct: 74  VILSKGYASSPWCLDELVHILRCR-KEGHGVWPVFYNIDPSDVEEQKGSFEEAFAEHEKS 132

Query: 118 YCPSLGWMGIFDIPTSESVLIEG-------------NVNDISKKLSDLFPSD---NKDQL 161
           +   +  +  +     E   ++G             N++ I K++S +            
Sbjct: 133 FKDDMDKVEKWKDALREVSYLKGLDLRKHLDGHEAENIDYIVKEISVILDRTILRVAVHP 192

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S  KE+ S L   S +   VGI G+GGIGKTT+A  +Y+ +   FEGS F++N+R 
Sbjct: 193 VGLDSRAKEVISLLDDESIDVRIVGIIGMGGIGKTTLAKEVYNLVFKRFEGSCFLENVRQ 252

Query: 222 E--SEKVGGLANIHL------------NFER------RRLSRMKVLIVFYDLTDLK-QID 260
           +  S  +  L    L            N +R       RL   +V IV  D+ D + ++D
Sbjct: 253 QIISSGIAYLQRQLLSDILKRKHEKIYNVDRGSKVIKERLRCKRVFIVLDDIEDKQEELD 312

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            ++G LD   PGSRVIITTR   LL+    S++   +EVKEL+ +DSL L S +AF +  
Sbjct: 313 KILGNLDWLYPGSRVIITTRIKNLLQ---PSKLYRQYEVKELNGSDSLQLLSLHAFNKRC 369

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   +++ ++ ++ YA G PLAL VLGS L G + + W S + KLK + H     +LK+S
Sbjct: 370 PNESYMDSASRIVSYAGGNPLALTVLGSDLCGQNIDVWNSRLEKLKVISHKGTHSILKIS 429

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
           YD LD  E++IFLD ACFF G  +  VM+ LD C F    GI+ L  + LV + +NNK  
Sbjct: 430 YDSLDVAEKSIFLDIACFFIGYKKDYVMSILDGCGFFPIDGINTLTRRCLVKVGANNKFL 489

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           MHDLL++MG EIV QES  DPGKRSRLWH ED+ ++L + T
Sbjct: 490 MHDLLRDMGREIVLQESFMDPGKRSRLWHKEDVIELLTDRT 530


>gi|356517284|ref|XP_003527318.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 641

 Score =  298 bits (762), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 194/532 (36%), Positives = 307/532 (57%), Gaps = 75/532 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           ++DVF++FRG+D R+ F  HL+ ALC++ I  F D++ L  G+EI+  L  AI+GS+I+I
Sbjct: 34  RYDVFINFRGEDTRYEFTGHLHQALCKKGIRAFFDEEDLQTGDEITTKLEEAIKGSRIAI 93

Query: 74  VIFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSDAGYC------------- 119
            +FS+GYASS +CLNEL  IL   + K   +V+PVFY VDPSD  +              
Sbjct: 94  TVFSKGYASSSFCLNELATILGCYREKTPLLVIPVFYKVDPSDVRHQRGSYEQGLDSLEK 153

Query: 120 ---PSL-----------GWMG--IFDIPTSESVLIEGNVNDISKKLSDLFPSDN-KDQLV 162
              P++           G+ G    D    E   IE  V+D+ +K+++   S    D  V
Sbjct: 154 RLHPNMEKWRTALHEVAGFSGHHFTDGAGYEYQFIEKIVDDVFRKINEAEASIYVADHPV 213

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G++S++ EI  +L + S++  + +GI G+GG+GK+T+A  +Y+  ++ F+ S F+QN+R+
Sbjct: 214 GLDSLVLEIRERLEAESSDAISMIGIHGMGGVGKSTLARQVYNLHTNQFDYSCFLQNVRE 273

Query: 222 ESEKVG--GLANIHLN-----------------FERRRLSRMKVLIVFYDLTDLKQIDLL 262
           ES + G   L +I L+                   + +L   KVL+V  D+ + KQ+   
Sbjct: 274 ESNRHGLKRLQSILLSQILKQGINLASEQQGTWMIKNQLRGKKVLLVLDDVDEHKQLQAF 333

Query: 263 IGRLDGFVPGSR----------VIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           +G+     P S+          +IITTRD QLL ++   R    +EVK LS ND++ L  
Sbjct: 334 VGK--SVWPESQSESKSGTRLVLIITTRDKQLLTSYGFKRT---YEVKNLSTNDAIQLLK 388

Query: 313 RNAFGQ-NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
           + AF   +     + ++ N V+ + +G+PLAL+V+GS L G S +EWESA+ + +R+P+ 
Sbjct: 389 QKAFKTCDEVDQSYKQVLNDVVTWTSGLPLALEVIGSNLFGKSIKEWESAIKQYQRIPNK 448

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVG 427
           +I K+LKVS+D L++EE+++FLD  C  K       + ++ +  D C    K  I  L+ 
Sbjct: 449 EILKILKVSFDALEEEEKSVFLDITCCLKDYKCREIEDILHSLYDNC---MKYHIGVLLD 505

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
           KSL+ I ++K+T+HDL++ MG EI RQ+S K+ GKR RLW  +DI QVL +N
Sbjct: 506 KSLIKIRDDKVTLHDLIENMGKEIDRQKSPKEAGKRRRLWLQKDIIQVLKDN 557


>gi|22329895|ref|NP_174439.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|20466614|gb|AAM20624.1| disease resistance gene, putative [Arabidopsis thaliana]
 gi|34098813|gb|AAQ56789.1| At1g31540 [Arabidopsis thaliana]
 gi|332193248|gb|AEE31369.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 776

 Score =  298 bits (762), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 250/742 (33%), Positives = 364/742 (49%), Gaps = 120/742 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG+DVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSHNWL----YDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   IV+PVFY VDPS   +  
Sbjct: 57  DLEQAIKESRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IVIPVFYHVDPSQVRH-- 111

Query: 121 SLGWMG-IFDIP-------------------------------TSESVLIEGNVNDISKK 148
            +G  G IF+                                   E+ +IE   ND+  K
Sbjct: 112 QIGDFGKIFENTCKRQTDEEVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGK 171

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L    P D+ ++LVG+E  I E+   L   S E   VGI G  GIGKTTIA A++  +S 
Sbjct: 172 LLLTTPKDS-EELVGIEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSR 230

Query: 209 HFEGSYFMQ--------------NIRDESEKVG----------GLANIHLNFE---RRRL 241
           HF+GS F+               N  D + K+           G  +I ++       RL
Sbjct: 231 HFQGSTFIDRAFVSYSRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERL 290

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
              KVLI+  DL D+  +D L+G+   F  GSR+I+ T D   L  H    + H++EV  
Sbjct: 291 KHQKVLIIIDDLDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLIAH---GIDHIYEVSF 347

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
            +   +  +  ++AF QN+   GF +L   V+++A   PL L +LG YL+    E W   
Sbjct: 348 PTDVHACQMLCQSAFKQNYAPKGFEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDM 407

Query: 362 VNKLKRMPHMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
           + +L+    +D  I+K+L++SYDGL+ E+Q IF   AC F   +   + + L     S  
Sbjct: 408 LPRLENSLRIDGKIEKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS-- 465

Query: 420 IGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
             +  L  KSL+ +    + MH  LQEMG +IVR +SI  PG+R  L  P DI+ +LN  
Sbjct: 466 FALENLADKSLIHVRQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNAC 525

Query: 480 TSLPT--GINLD-------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           T      GI+LD        + E    G SNL RF E    I++  LKE  +  LP S  
Sbjct: 526 TGTQKVLGISLDIRNIRELDVHERAFKGMSNL-RFLE----IKNFGLKEDGL-HLPPSFD 579

Query: 531 NLSR-----------------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            L R                       LV L++   S L  +   +  L  L+ ++L G 
Sbjct: 580 YLPRTLKLLCWSKFPMRCMPFGFRPENLVKLEM-QYSKLHKLWEGVAPLTCLKEMDLHGS 638

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---EL 623
             L+ +P ++    +LE LNL   +   ++PSS++ L+KL +L + NCK L+ LP    L
Sbjct: 639 SNLKVIP-DLSEATNLEILNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNL 697

Query: 624 PCGSSIHARHCTSLKTLSNSST 645
                ++  HC+ LKT    ST
Sbjct: 698 KSLDRLNLYHCSKLKTFPKFST 719



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPTG NL SL  L L  CS LK FP+ S NI  L+L  T IE+ PS++ +L  LV+  ++
Sbjct: 691 LPTGFNLKSLDRLNLYHCSKLKTFPKFSTNISVLNLNLTNIEDFPSNL-HLENLVEFRIS 749


>gi|3860163|gb|AAC72977.1| disease resistance protein RPP1-WsA [Arabidopsis thaliana]
          Length = 1189

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 237/725 (32%), Positives = 351/725 (48%), Gaps = 115/725 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 51  KHDVFPSFHGADVRRTFLSHILESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 110

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           + S  YASS WCL+EL +I++ +   GQIV+ +FY V+P+D                   
Sbjct: 111 LLSRKYASSSWCLDELAEIMKCREVLGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGK 170

Query: 116 ------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDN 157
                             AGY  S  W       ++E+ +IE    D+S  L    PS +
Sbjct: 171 TKEHIERWRKALEDVATIAGY-HSHKW-------SNEAEMIEKISTDVSNMLDLSIPSKD 222

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
            D  VG+ + ++  E  L     E   +GIWG  GIGKTTIA  +++ +S  F+ S  M 
Sbjct: 223 FDDFVGMAAHMERTEQLLRLDLDEARMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMV 282

Query: 218 NIR--------DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTD 255
           NI+        DE      L N               HL   + RL   KV +V  ++  
Sbjct: 283 NIKGCYPRPCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQ 342

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L Q+D L      F PGSR+IITT D  +LK H    + HV++V+  S +++  +F  NA
Sbjct: 343 LGQLDALAKDTRWFGPGSRIIITTEDQGILKAHG---INHVYKVEYPSNDEAFQIFCMNA 399

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           FGQ  P  GF +L+  V   A  +PL L+VLGS L+GMS+ EWE  + +L+      I  
Sbjct: 400 FGQKQPYEGFCDLAWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGG 459

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSL 430
           +++ SYD L DE++ +FL  AC F        ++ L   FLD  +     GI  L  KSL
Sbjct: 460 IIQFSYDALCDEDKYLFLYIACLFNNESTTKVEEVLANKFLDVGQ-----GIHVLAQKSL 514

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENT---SLPTGI 486
           ++    +I MH LL++ G E  R++ +     + +L   E DI +VLN++T       GI
Sbjct: 515 ISFEGEEIQMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERDICEVLNDDTIDSRRFIGI 574

Query: 487 NLDSLK---ELYLG--GCSNLKRFPEISCN---------IEDLDLKETAIEE-------- 524
           +LD  K   EL +       +  F  +  N         ++DL      I          
Sbjct: 575 HLDLSKNEEELNISEKALERIHDFQFVRINDKNHALHERLQDLICHSPKIRSLKWYSYQN 634

Query: 525 --LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
             LPS+  N   LV+LD++  S L+ +      L++L+ ++LS    L++LP  +    +
Sbjct: 635 ICLPSTF-NPEFLVELDMS-FSKLQKLWEGTKQLRNLKWMDLSYSSYLKELP-NLSTATN 691

Query: 583 LEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLK 638
           LE LNL       ++PSS+++L+ L  L LQ C  L  LP     +    ++  +C SL+
Sbjct: 692 LEELNLRNCSSLVELPSSIEKLTSLQILDLQGCSSLVELPSFGNATKLEILYLDYCRSLE 751

Query: 639 TLSNS 643
            L  S
Sbjct: 752 KLPPS 756



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 29/161 (18%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP  INL SL  L L  CS LK FPEIS +I+ L L  TAI+E+P SI + S L +  +
Sbjct: 872  ALPININLKSLDTLNLTDCSQLKSFPEISTHIKYLRLTGTAIKEVPLSIMSWSPLAEFQI 931

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +    LK                        + P     +  L+      KD +++   +
Sbjct: 932  SYFESLK------------------------EFPHAFDIITELQL----SKDIQEVTPWV 963

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            K++S+L   RL NC  L SLP+LP   + ++A +C SL+ L
Sbjct: 964  KRMSRLRYFRLNNCNNLVSLPQLPDSLAYLYADNCKSLEKL 1004



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 11/132 (8%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE------TAIEELPSSIGNLSRL 535
           LP   N  +L EL L  CS+L   P       +L LKE      +++ +LPSSIG+++ L
Sbjct: 776 LPAIENATNLWELNLLNCSSLIELPLSIGTARNLFLKELNISGCSSLVKLPSSIGDMTNL 835

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----K 591
            + DL+NCS L  + S + NL++L +L + GC KLE LP  I NL+SL+ LNL +    K
Sbjct: 836 KEFDLSNCSNLVELPSSIGNLQNLCKLIMRGCSKLEALPINI-NLKSLDTLNLTDCSQLK 894

Query: 592 DFEKIPSSMKQL 603
            F +I + +K L
Sbjct: 895 SFPEISTHIKYL 906



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 49/274 (17%)

Query: 421 GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            + R+     V I++    +H+ LQ++            P  RS  W+    YQ    N 
Sbjct: 591 ALERIHDFQFVRINDKNHALHERLQDL--------ICHSPKIRSLKWYS---YQ----NI 635

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETA-IEELPSSIGNLSRLV 536
            LP+  N + L EL +   S L++  E +  + +L   DL  ++ ++ELP+ +   + L 
Sbjct: 636 CLPSTFNPEFLVELDMSF-SKLQKLWEGTKQLRNLKWMDLSYSSYLKELPN-LSTATNLE 693

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
           +L+L NCS L  + S +  L SL+ L+L GC  L +LP   GN   LE L L   +  EK
Sbjct: 694 ELNLRNCSSLVELPSSIEKLTSLQILDLQGCSSLVELP-SFGNATKLEILYLDYCRSLEK 752

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKTL------------ 640
           +P S+   + L  L L+NC R+  LP +   ++   ++  +C+SL  L            
Sbjct: 753 LPPSINA-NNLQKLSLRNCSRIVELPAIENATNLWELNLLNCSSLIELPLSIGTARNLFL 811

Query: 641 -----SNSSTLLTRSSKHWDI-----FNFSNCSN 664
                S  S+L+   S   D+     F+ SNCSN
Sbjct: 812 KELNISGCSSLVKLPSSIGDMTNLKEFDLSNCSN 845



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 18/194 (9%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKET-AIEELPSSIGNLSRLVD 537
           LP+ I  L SL+ L L GCS+L   P    +  +E L L    ++E+LP SI N + L  
Sbjct: 706 LPSSIEKLTSLQILDLQGCSSLVELPSFGNATKLEILYLDYCRSLEKLPPSI-NANNLQK 764

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL--EYLNLAE-KDFE 594
           L L NCS +  + + + N  +L  LNL  C  L +LP  IG   +L  + LN++      
Sbjct: 765 LSLRNCSRIVELPA-IENATNLWELNLLNCSSLIELPLSIGTARNLFLKELNISGCSSLV 823

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRS 650
           K+PSS+  ++ L +  L NC  L  LP     L     +  R C+ L+ L  +  L    
Sbjct: 824 KLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQNLCKLIMRGCSKLEALPININL---- 879

Query: 651 SKHWDIFNFSNCSN 664
            K  D  N ++CS 
Sbjct: 880 -KSLDTLNLTDCSQ 892


>gi|13509227|emb|CAC35333.1| N2-C protein [Linum usitatissimum]
          Length = 1119

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 232/736 (31%), Positives = 366/736 (49%), Gaps = 120/736 (16%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S+  +   +P  +++VFLSFRG DVR  F  HL  +L R K  TF D++ L +G  I P
Sbjct: 17  SSADLTPTSLPSGEYEVFLSFRGPDVRKTFADHLYTSLVRSKFRTFRDEEELRKGGTIGP 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDPSD 115
           S+  AI  SKI I I +  YASS+WCL EL K++E     G      I++PVF  VDP D
Sbjct: 77  SIIRAITESKIYIPILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRD 136

Query: 116 AGYCPSLGWMGIFDIPTS----ESVL-------------------IEGNVNDISKKLSDL 152
             +  S  +   F+  +     E+VL                    +G+ + I K L+++
Sbjct: 137 VRHTESGSYKEAFEQHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEV 196

Query: 153 ---FPSDNK---DQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
                ++ K   D+LVG++S + E+   L L  S     +GI G+GG+GKTT+A A+Y  
Sbjct: 197 ELHLRANYKLVTDELVGIDSPVDEVVGLLNLDSSASEKIIGIHGMGGLGKTTLAKAVYDK 256

Query: 206 ISSHFEGSYFMQNIRDE-SEKVGGL--------------------ANIHLNFERRRLSRM 244
           + + FE  +F++NIRD  SEK G L                    A+  +   R R+ R 
Sbjct: 257 VFTRFERCFFLENIRDTLSEKNGVLIMQNKIISGILRKDFNEAKYASDGIRIIRDRVCRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+LIV  D+ +  Q D ++G+LD F   SR +ITTRD + L+  R  ++   FE++E+S 
Sbjct: 317 KLLIVLDDVDEKFQFDEVLGKLDNFSMDSRFLITTRDARGLELLRECKM---FELQEMSP 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SLTLF++NAFG + P   +  LS   ++ A G+PL ++V+GS L  M +  WE  + +
Sbjct: 374 DHSLTLFNKNAFGVDCPPEDYAILSKEFVQAAAGLPLYIKVIGSLLFCMDKIFWEEKLEE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK++    +Q+ LK+SY+ L   E+ IFLD AC+F G  +   +     C F  +  I  
Sbjct: 434 LKKISPTKVQERLKISYNELTHNEKQIFLDIACYFIGLSKIEPILMWSDCDFYPESTIRY 493

Query: 425 LVGKSLVTISN--------NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           L  +SL+ +          N   MH+ ++++G  IVR+E+ ++P KRSR+W  +D   +L
Sbjct: 494 LTQRSLIKLQRSEVKGDDINTFQMHNHVRDLGRAIVREENNQNPYKRSRIWSNKDAIDML 553

Query: 477 NENTS----------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDL 517
                                + T   L+ L  L     SN +    F ++  N+  L L
Sbjct: 554 KHKKGTDCVEVLTVDMEGEDLILTNKELEKLTRLRYLSVSNARLAGDFKDVLPNLRWLRL 613

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCS---GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
              + + +P+ +  L++LVDL+L +CS   G K   + L   + L+ ++L  C  L+K+P
Sbjct: 614 H--SCDSVPTGL-YLNKLVDLELVDCSVRDGWKG-WNELKVARKLKAVSLKRCFHLKKVP 669

Query: 575 E----------------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           +                      +IGN +SL YL ++     KI   + +L  L  L   
Sbjct: 670 DFSDCEDLEWLAFSECRKMRGEVDIGNFKSLRYLLISNTKITKIKGEIGRLRNLKYLHAD 729

Query: 613 NCKRLQSLPELPCGSS 628
           +     SL E+P G S
Sbjct: 730 H----SSLKEVPAGIS 741



 Score = 45.4 bits (106), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 8/136 (5%)

Query: 489  DSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEE-LPSSIGNLSRLVDLDLTNCSG 545
            +SL  L + GCS L     +     +  L L    I E +PSS+   ++L  L L  C  
Sbjct: 891  ESLSNLNVVGCSALIGLEALHSMVKLRSLILMGAKITETVPSSLSMFTQLTTLGL--CFM 948

Query: 546  LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLS 604
             +     L NLK+LR L +  CL+L ++P  +  LESLEYL+L+  +   K+P  +  + 
Sbjct: 949  SQEQFPNLSNLKNLRELGMDYCLELIEVPG-LDTLESLEYLSLSGCQSIRKVP-DLSGMK 1006

Query: 605  KLSDLRLQNCKRLQSL 620
            KL  L ++ C +L+ +
Sbjct: 1007 KLKTLDVEGCIQLKEV 1022


>gi|399920187|gb|AFP55534.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1038

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 233/655 (35%), Positives = 351/655 (53%), Gaps = 59/655 (9%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F  HL   L  + I TF DD +L RG  ISP L +AIE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTDHLYDKLQWQGITTFRDDPQLERGKAISPELLTAIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTS 133
           V+ S  YASS WCL EL KILE   + G I+ P+FY VDPS   +    G          
Sbjct: 78  VVLSPNYASSTWCLLELSKILECMEERGTIL-PIFYEVDPSHVRH--QRGSFAEAFQEHD 134

Query: 134 ESVLIEGNVNDISKKLSDLFPS----DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWG 189
           E   +E     +    S + PS     + D+L G+++ ++EI++ L   + +   +GIWG
Sbjct: 135 EKFGVELIKEIVQALWSKVHPSLTVFGSSDKLFGMDTKLEEIDALLDKEANDVRFIGIWG 194

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG------------------GLAN 231
           +GG+GKTT+A  +Y NIS  FE   F+ N+R+ S   G                   + +
Sbjct: 195 MGGMGKTTLARLVYENISHQFEVCIFLANVREVSATHGLVHLQKQILSQILKEENVQVWD 254

Query: 232 IH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
           +H  +   +R +   +VL+V  D+   +Q+  L+G  D F   SR+IITTR+  +L  H 
Sbjct: 255 VHSGITMIKRCVCNKEVLLVLDDVDHSEQLKNLVGEKDYFGLRSRIIITTRNRHVLVEHD 314

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              +   +E+K L  +++L LFS  AF +  P   + E S   ++YA G+PLAL++LGS+
Sbjct: 315 ---IEKQYELKGLEEDEALQLFSWKAFRKIEPEEDYAEQSKSFVRYAEGLPLALKILGSF 371

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           L   S + W SA  KLK+ P+  + ++LK+S+DGLD+ E+  FLD ACF +  D   ++ 
Sbjct: 372 LYKRSLDSWSSAFQKLKQTPNPTVFEILKISFDGLDEMEKKTFLDIACFRRLYDNESMIE 431

Query: 410 FLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
            + +    ++I I  LV KSL+TIS  N + +HDL+QEMG EIVRQE+ ++PG RSRLW 
Sbjct: 432 QVYSSELCSRIAIEVLVEKSLITISFGNHVYVHDLIQEMGREIVRQEN-EEPGGRSRLWL 490

Query: 469 PEDIYQVLNEN--TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP 526
             +I+ V  +N  T +  GI L  L EL      NL+ F ++ CN++ L +    +   P
Sbjct: 491 RNNIFHVFTKNTGTEVTEGIFL-HLHELEEADW-NLEAFSKM-CNLKLLYIHNLRLSLGP 547

Query: 527 SSIGNLSRLVDL---------------DLTNCSGLKSVSSRLCN----LKSLRRLNLSGC 567
             + +  R++                 +LT  S + S    L N    L  L+ ++LS  
Sbjct: 548 KYLPDALRILKWSWYPSKSLPPGFQPDELTELSFVHSNIDHLWNGIKYLDKLKSIDLSYS 607

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           + L + P+  G + +LE L L    +  KI  S+  L +L     +NCK ++SLP
Sbjct: 608 INLTRTPDFTG-IPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLP 661



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 39/220 (17%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR ++W+  +   +     SLP+ +N++ L+   + GCS LK  PE    +  +  L L 
Sbjct: 644 KRLKIWNFRNCKSI----KSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLYLG 699

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNC----------------------------SGLKSV 549
            TA+E+LPSSI +LS+ LV+LDL+                                L  +
Sbjct: 700 GTAVEKLPSSIEHLSKSLVELDLSGIVIREQPYSLFLKQNLIVSSFGLLPRKSPHPLIPL 759

Query: 550 SSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            + L    SL  L L+ C   E ++P +IG+L SL +L L   +F  +P+S+  LSKLS 
Sbjct: 760 LASLKQFSSLTSLKLNDCNLCEGEIPNDIGSLPSLNWLELRGNNFVSLPASIHLLSKLSY 819

Query: 609 LRLQNCKRLQSLPELPCGS--SIHARHCTSLKTLSNSSTL 646
           + L+NCKRLQ LPELP     ++    CTSL    +   L
Sbjct: 820 IDLENCKRLQQLPELPASDYLNVATDDCTSLLVFPDPPDL 859



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 4/121 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           LD LK + L    NL R P+ +   N+E L L+  T + ++  SI  L RL   +  NC 
Sbjct: 596 LDKLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCK 655

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            +KS+ S + N++ L   ++SGC KL+ +PE +G  + L  L L     EK+PSS++ LS
Sbjct: 656 SIKSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLYLGGTAVEKLPSSIEHLS 714

Query: 605 K 605
           K
Sbjct: 715 K 715


>gi|15241561|ref|NP_198701.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758062|dbj|BAB08641.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006983|gb|AED94366.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 986

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 238/717 (33%), Positives = 363/717 (50%), Gaps = 105/717 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +++VF SF G D+R  F+SHL        I  F D  + R   I+P+L  AI  S+ISIV
Sbjct: 8   RYNVFPSFHGGDIRKTFLSHLRKQFNSNGITMFDDQGIERSQTIAPALIQAIRESRISIV 67

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG----------------- 117
           + S+ YASS WCLNELV+IL+ K+    +V+P+FY VDPSD                   
Sbjct: 68  VLSKNYASSSWCLNELVEILKCKD----VVMPIFYEVDPSDVRKQTGDFGKAFKNSCKSK 123

Query: 118 -------YCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  +  +L ++G      S     E+ +IE    D+S KL +  PS + D  VG+E
Sbjct: 124 TKEERQRWIQALIFVGNIAGEHSLKWENEADMIEKIAKDVSDKL-NATPSKDFDAFVGLE 182

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
             I+E+ S L     +   VGI G  GIGKTTIA A+ S +SS+F+ S FM+N+R     
Sbjct: 183 FHIRELSSLLYLDYEQVRIVGICGPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSLNI 242

Query: 221 ---------DESEKV-------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                    D  E++        G+   HL   R RL   KVLI+  D+ DL  +  L  
Sbjct: 243 GLDEYGLKLDLQERLLSKIMNQKGMRIEHLGTIRDRLHDQKVLIILDDVNDL-DLYALAD 301

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           +   F PGSR+I+TT D +LL+ H    + +V+ V   S  ++L +F R AF Q+     
Sbjct: 302 QTTWFGPGSRIIVTTEDNELLQKHD---INNVYHVDFPSRKEALEIFCRCAFRQSSAPDT 358

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
            L+L+  V +    +PL L V+GS L G +E+EWE  + +L+     D +  L+V YD L
Sbjct: 359 ILKLAERVTELCGNLPLGLCVIGSSLHGKTEDEWEILIRRLEISLDRDNEAQLRVGYDSL 418

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDL 443
            + EQ +FL  A FF   D+ LVM  L       + G+  L  KSL+ IS N KI MH+L
Sbjct: 419 HENEQALFLSIAVFFNYKDRQLVMAMLLDSNLDVEYGLRTLANKSLIHISRNEKIVMHNL 478

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS--LPTGINLD--SLKELYLGGC 499
           LQ +G + ++++   +P KR  L   ++I  VL  +T   + +GI+ D   + E++L   
Sbjct: 479 LQHVGRQAIQRQ---EPWKRHILIDADEICNVLENDTDARIVSGISFDISRIGEVFLSER 535

Query: 500 SNLKRFPEISCNIEDLDLKETAIEE-----LPSSIG----------------------NL 532
           +  KR     CN++ L + +T  +E     +P ++                       NL
Sbjct: 536 A-FKRL----CNLQFLRVFKTGYDEKNRVRIPENMEFPPRLRLLQWEAYPRRSLSLKLNL 590

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEK 591
             LV+LD+   S L+ +      L +L++++LS    L+KLP ++ N  +LE L+L A +
Sbjct: 591 EYLVELDMEG-SLLEKLWDGTQPLANLKKMSLSSSWYLKKLP-DLSNATNLEELDLRACQ 648

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           +  ++PSS   L KL  L +  C+RL+ +P    L     ++   C+ LK+  + ST
Sbjct: 649 NLVELPSSFSYLHKLKYLNMMGCRRLKEVPPHINLKSLELVNMYGCSRLKSFPDIST 705



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 30/162 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P  INL SL+ + + GCS LK FP+IS NI  LD+  T +EELP S+   SRL  L++ 
Sbjct: 677 VPPHINLKSLELVNMYGCSRLKSFPDISTNISSLDISYTDVEELPESMTMWSRLRTLEIY 736

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK V+    NL                            YL+L+E   EKIP  +K
Sbjct: 737 KSRNLKIVTHVPLNLT---------------------------YLDLSETRIEKIPDDIK 769

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIH--ARHCTSLKTLS 641
            +  L  L L  C++L SLPELP GS ++  A  C SL+++S
Sbjct: 770 NVHGLQILFLGGCRKLASLPELP-GSLLYLSANECESLESVS 810


>gi|13509221|emb|CAC35330.1| N1-D protein [Linum usitatissimum]
          Length = 1108

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 233/740 (31%), Positives = 361/740 (48%), Gaps = 128/740 (17%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S+  +   +P  +++VFLSFRG DVR  F  HL  +L R K  TF D++ L +G  I P
Sbjct: 17  SSADLTPTSLPSGEYEVFLSFRGLDVRKTFADHLYTSLVRSKFRTFRDEEELEKGETIGP 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDPSD 115
           SL  AI  SKI I I ++ YASS+WCL EL K++E     G      I++PVF  VDP D
Sbjct: 77  SLIRAITESKIYIPILTQNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRD 136

Query: 116 AGYCPSLGWMGIFDIPTS----ESVL-------------------IEGNVNDISKKLSD- 151
             +  S  +   F+  +     E+VL                    +G+ + I K L++ 
Sbjct: 137 VRHTESGSYKEAFEQHSQKHDPETVLEWKEALQEVGRMKGYHVTESDGHGSIIDKILTEV 196

Query: 152 -LFPSDN----KDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            L    N     D+LVG++S + E+   L L  ST    +GI G+GG+GKTT+A A+Y  
Sbjct: 197 ELHLGANYALVTDELVGIDSRVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDK 256

Query: 206 ISSHFEGSYFMQNIRDESEKVGGLANIH---------------------LNFERRRLSRM 244
           +S+ FE  YF++NIRD   +  G++ +                      +   R R+ R 
Sbjct: 257 VSTKFERCYFLENIRDTLSEKNGVSILQNKIISGILKKDFNEAKNASDGIRIIRDRVCRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+LIV  D+ +  Q D ++G+L+ F   SR +ITTRD + L+  R  ++   FE++E+S 
Sbjct: 317 KLLIVLDDVDEKFQFDEVLGKLNNFSMDSRFLITTRDARGLELLRECKM---FELQEMSP 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SLTLF++NAFG + P   +  LSN  ++ A G+PL ++V+GS L  M +  WE  + +
Sbjct: 374 DHSLTLFNKNAFGVDFPPKDYAILSNEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEKLEE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
            K++    +Q+ LK+SY+ L   E+ IFLD AC+F G+ +   M     C F  +  I  
Sbjct: 434 FKKISPTKVQERLKISYNELTYNEKQIFLDIACYFIGSYKIEPMRMWSDCDFYPESTIRS 493

Query: 425 LVGKSLVTISNNKIT--------MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           L+ +SL+    ++I         MHD + ++G  IVR+E+ K P KRSR+W  +D   +L
Sbjct: 494 LIQRSLIKFQRSRIKSDILNTFWMHDHIIDLGRAIVREENNKKPYKRSRIWSNKDAIDML 553

Query: 477 NENTS----------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDL 517
                                + T   L+ L  L     SN +    F ++  N+  L L
Sbjct: 554 KHKKGTDCVEVLTVDMEGEDLILTNKELEKLTRLRYLSVSNARLAGDFKDVLPNLRWLRL 613

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCS---GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
              + + +P+ +  L +LV  +L +CS   G K  +  L     L+ + L  C  L K+P
Sbjct: 614 H--SCDSVPTGL-YLKKLVQFELVDCSVRDGWKGWNE-LKVAHKLKAVTLERCFNLNKVP 669

Query: 575 E----------------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           +                      +IGN +SL +L +++    KI   +         RL 
Sbjct: 670 DFSHCRDLEWLDFDECRNMRGEVDIGNFKSLRFLLISKTKITKIKGEIG--------RLL 721

Query: 613 NCKRL----QSLPELPCGSS 628
           N K L     SL E+P G S
Sbjct: 722 NLKYLIAGGSSLKEVPAGIS 741


>gi|186479099|ref|NP_001117396.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332193249|gb|AEE31370.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1161

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 250/742 (33%), Positives = 364/742 (49%), Gaps = 120/742 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG+DVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSHNWL----YDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   IV+PVFY VDPS   +  
Sbjct: 57  DLEQAIKESRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IVIPVFYHVDPSQVRH-- 111

Query: 121 SLGWMG-IFDIP-------------------------------TSESVLIEGNVNDISKK 148
            +G  G IF+                                   E+ +IE   ND+  K
Sbjct: 112 QIGDFGKIFENTCKRQTDEEVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGK 171

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L    P D+ ++LVG+E  I E+   L   S E   VGI G  GIGKTTIA A++  +S 
Sbjct: 172 LLLTTPKDS-EELVGIEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSR 230

Query: 209 HFEGSYFMQ--------------NIRDESEKVG----------GLANIHLNFE---RRRL 241
           HF+GS F+               N  D + K+           G  +I ++       RL
Sbjct: 231 HFQGSTFIDRAFVSYSRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERL 290

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
              KVLI+  DL D+  +D L+G+   F  GSR+I+ T D   L  H    + H++EV  
Sbjct: 291 KHQKVLIIIDDLDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLIAH---GIDHIYEVSF 347

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
            +   +  +  ++AF QN+   GF +L   V+++A   PL L +LG YL+    E W   
Sbjct: 348 PTDVHACQMLCQSAFKQNYAPKGFEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDM 407

Query: 362 VNKLKRMPHMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
           + +L+    +D  I+K+L++SYDGL+ E+Q IF   AC F   +   + + L     S  
Sbjct: 408 LPRLENSLRIDGKIEKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS-- 465

Query: 420 IGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
             +  L  KSL+ +    + MH  LQEMG +IVR +SI  PG+R  L  P DI+ +LN  
Sbjct: 466 FALENLADKSLIHVRQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNAC 525

Query: 480 TSLPT--GINLD-------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           T      GI+LD        + E    G SNL RF E    I++  LKE  +  LP S  
Sbjct: 526 TGTQKVLGISLDIRNIRELDVHERAFKGMSNL-RFLE----IKNFGLKEDGL-HLPPSFD 579

Query: 531 NLSR-----------------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            L R                       LV L++   S L  +   +  L  L+ ++L G 
Sbjct: 580 YLPRTLKLLCWSKFPMRCMPFGFRPENLVKLEM-QYSKLHKLWEGVAPLTCLKEMDLHGS 638

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---EL 623
             L+ +P ++    +LE LNL   +   ++PSS++ L+KL +L + NCK L+ LP    L
Sbjct: 639 SNLKVIP-DLSEATNLEILNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNL 697

Query: 624 PCGSSIHARHCTSLKTLSNSST 645
                ++  HC+ LKT    ST
Sbjct: 698 KSLDRLNLYHCSKLKTFPKFST 719



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 54/93 (58%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L   GCS L+ FPEIS NI  L L ETAIEE+P  I   S L +L +
Sbjct: 813 TLPTGINLQSLDYLCFSGCSQLRSFPEISTNISVLYLDETAIEEVPWWIEKFSNLTELSM 872

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            +CS LK V   +  LK L+      C  L ++
Sbjct: 873 NSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRV 905



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 85/193 (44%), Gaps = 56/193 (29%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD---- 537
           LPTG NL SL  L L  CS LK FP+ S NI  L+L  T IE+ PS++ +L  LV+    
Sbjct: 691 LPTGFNLKSLDRLNLYHCSKLKTFPKFSTNISVLNLNLTNIEDFPSNL-HLENLVEFRIS 749

Query: 538 -----------------------------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
                                        L L N   L  ++S   NL  L+ L +  C+
Sbjct: 750 KEESDEKQWEEEKPLTPFLAMMLSPTLTSLHLENLPSLVELTSSFQNLNQLKDLIIINCI 809

Query: 569 KLEKLPEEIGNLESLEY---------------------LNLAEKDFEKIPSSMKQLSKLS 607
            LE LP  I NL+SL+Y                     L L E   E++P  +++ S L+
Sbjct: 810 NLETLPTGI-NLQSLDYLCFSGCSQLRSFPEISTNISVLYLDETAIEEVPWWIEKFSNLT 868

Query: 608 DLRLQNCKRLQSL 620
           +L + +C RL+ +
Sbjct: 869 ELSMNSCSRLKCV 881


>gi|15238808|ref|NP_197338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332005162|gb|AED92545.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 245/787 (31%), Positives = 361/787 (45%), Gaps = 145/787 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR  F+SH+      + I  FIDD++ RG  I P L  AI  SKI+IV+
Sbjct: 61  HQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMKRGESIGPGLFQAIRESKIAIVL 120

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GYCP--- 120
            S+ YASS WCLNELV+I+  + + GQ V+ VFY VDPSD               C    
Sbjct: 121 LSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKTCVGKT 180

Query: 121 -------SLGWMGIFDIPTSESVLIEGNVN---DISKKLSDLF---PSDNKDQLVGVESI 167
                  S   M + +I   +S   +   +    ++K +SD+    PS + D  VG+   
Sbjct: 181 QEVKQRWSRALMDVANILGQDSRKWDKEADMIVKVAKDVSDVLSYTPSRDFDDYVGIRPH 240

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR------- 220
           I  I S L   S++   +GI G  GIGKTTIA  +Y  IS  F+ S F++NIR       
Sbjct: 241 ITRINSLLCLESSDVRMIGILGPPGIGKTTIARVLYDQISEKFQFSAFIENIRLSYWKGW 300

Query: 221 -DES------EKVGGLANIHLNFERRRLSRM---------------------KVLIVFYD 252
            DE       E + G     LN +RR LS +                     KVL++   
Sbjct: 301 HDEGNLDFPVEIMTGDRQRKLNLQRRLLSELFNQKDIQVRHLGAVQERLRDHKVLVILDG 360

Query: 253 LTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           +  L+Q+  L      F  GSR+IITT+D +LL+ H    + HV++V   + +++L +F 
Sbjct: 361 VDQLEQLTALAKETQWFGYGSRIIITTQDQRLLRAHE---INHVYKVDLPATDEALQIFC 417

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
             AFGQ  P  GF +L+      A  +PL L+VLGSYL+GMS EEW++A+ +L+     +
Sbjct: 418 LYAFGQKFPYDGFKKLAREFTALAGELPLGLRVLGSYLRGMSLEEWKNALPRLRTSLDGE 477

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           I+K L+ +Y+ L D+++++FL  AC F G     V  +L         G   L  KSL++
Sbjct: 478 IEKTLRFAYNVLSDKDKSLFLHIACLFNGCQVNHVKQWLANSSLDVNHGFEVLSNKSLIS 537

Query: 433 ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD- 489
                + MH LLQ++G +IVR++SI +P KR  L    +I  V+ +NT   T  GI L  
Sbjct: 538 TDMGLVRMHSLLQQLGVDIVRKQSIGEPEKRQFLVDVNEISDVITDNTGTGTILGIMLHV 597

Query: 490 -------SLKELYLGGCSNLKRFPEISCNIEDLDL------------------------- 517
                   ++E      +NL+      C  + L+L                         
Sbjct: 598 SKIEDVLVIEETVFDRMTNLQFLILDECLRDKLNLPLGLNCLPRKIRLLRWDYCPLSIWP 657

Query: 518 -------------KETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS--SRLCNLKS---- 558
                        +    E+L   I  L  L  ++L +   LK +   S   NL+S    
Sbjct: 658 SKFSAKFLVELIMRANKFEKLWEGIQPLKNLKRMELGDARNLKEIPDLSNATNLESLLLS 717

Query: 559 -----------------LRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSM 600
                            L+ L+L GC  L KL   I N  SLE LNL A  +  ++P ++
Sbjct: 718 FCTSLLEIPSSIRGTTNLKELDLGGCASLVKLSSCICNATSLEELNLSACSNLVELPCAL 777

Query: 601 ---KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIF 657
                +  LS L L    RL++ PE+           T+++ + +S  L +R  K     
Sbjct: 778 PGDSNMRSLSKLLLNGSSRLKTFPEISTNIQELNLSGTAIEEVPSSIRLWSRLDK----L 833

Query: 658 NFSNCSN 664
           + S C N
Sbjct: 834 DMSRCKN 840



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 97/234 (41%), Gaps = 71/234 (30%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP   N+ SL +L L G S LK FPEIS NI++L+L  TAIEE+PSSI   SRL  LD+
Sbjct: 776  ALPGDSNMRSLSKLLLNGSSRLKTFPEISTNIQELNLSGTAIEEVPSSIRLWSRLDKLDM 835

Query: 541  TNCSGLK--------------------SVSSRLCNLKSLRRLNLSGCLKLEKLP-EEIGN 579
            + C  LK                     +   + NL  LR   +  C KL+ +    I  
Sbjct: 836  SRCKNLKMFPPVPDGISVLNLSETEIEDIPPWVENLSQLRHFVMIRCKKLDNISLSRISK 895

Query: 580  LESLEYLNLAEKD----------------------------------------------- 592
            +E +  L +   D                                               
Sbjct: 896  MEGVHCLQITRGDEDVSGDSIVNIRWYSNFPNQWTLQSDMLQICLPELVYTSPVSLHFIS 955

Query: 593  --FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP-CGSSIHARHCTSLKTLSNS 643
              F+ IP  +K LS+L  L    C +L SLP+L  C SS+ A +C SL+T+  S
Sbjct: 956  NEFKTIPDCIKNLSQLHQLSFYRCHKLVSLPQLSDCLSSLDAENCVSLETIDGS 1009



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 28/181 (15%)

Query: 477 NENTSLPTGIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNL 532
           N+   L  GI  L +LK + LG   NLK  P++S   N+E L L   T++ E+PSSI   
Sbjct: 673 NKFEKLWEGIQPLKNLKRMELGDARNLKEIPDLSNATNLESLLLSFCTSLLEIPSSIRGT 732

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI---GNLESL------ 583
           + L +LDL  C+ L  +SS +CN  SL  LNLS C  L +LP  +    N+ SL      
Sbjct: 733 TNLKELDLGGCASLVKLSSCICNATSLEELNLSACSNLVELPCALPGDSNMRSLSKLLLN 792

Query: 584 ---------------EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
                          + LNL+    E++PSS++  S+L  L +  CK L+  P +P G S
Sbjct: 793 GSSRLKTFPEISTNIQELNLSGTAIEEVPSSIRLWSRLDKLDMSRCKNLKMFPPVPDGIS 852

Query: 629 I 629
           +
Sbjct: 853 V 853


>gi|357513713|ref|XP_003627145.1| NBS resistance protein [Medicago truncatula]
 gi|355521167|gb|AET01621.1| NBS resistance protein [Medicago truncatula]
          Length = 1108

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 239/741 (32%), Positives = 350/741 (47%), Gaps = 162/741 (21%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF+SFRG+D R NF   L+ AL +E IET+ID  +  G+E+ P L  AI  S+IS++
Sbjct: 8   KYDVFISFRGEDTRKNFTGKLHEALKKENIETYIDLYVKVGDEVGPMLIQAIHESQISVI 67

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------AGY--- 118
           +FS+ + +S+WCL EL+ ILE +  +GQ+V+P +Y  DPS+             A Y   
Sbjct: 68  VFSKNFVTSKWCLEELLHILECRKHHGQVVLPFYYETDPSNIVGLGKGSYEKAFARYERE 127

Query: 119 -----CPSLG-------W-MGIFDIP----------TSESVLIEGNVNDISKKLSDLFPS 155
                C  L        W   + ++           + +S  I+  V D+ + LS L+P+
Sbjct: 128 LMNNQCDDLTNPGKVSKWKAALVEVAAISARDSRHYSDDSQFIQCIVKDVLQTLSRLYPN 187

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
           + +D L+ ++   +E+E+ L     +   +GIWG+ G+GKTTIA  ++S    HF+ S F
Sbjct: 188 ELRD-LIQIDEKGEEVENYL----KKVPRIGIWGMDGLGKTTIARQMFSKHFMHFDSSCF 242

Query: 216 MQNIRDESEKVGGLANIHLNFERRRL-----------------SRMKVLIVFYDLTDLKQ 258
           +++I        GL    L + R +L                 S  +V IV  D+ +  Q
Sbjct: 243 LESISQ------GLKEFGLPYLRDKLLNDLLKQKIITSDFHGISGKRVFIVLDDVDNGMQ 296

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +D L G L+   P SR+IITT++   L      RV  ++EV++  + +SL LF   AF Q
Sbjct: 297 LDYLCGELNDLAPNSRIIITTKNRDTL----NGRVDEIYEVEKWKFKESLELFCLAAFKQ 352

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL--KRMPHMDIQKV 376
            HP  G+  LS   +  A GVPLAL+VLGS+L   + E WE  +N L  K     +IQ +
Sbjct: 353 KHPKVGYERLSERAVACARGVPLALKVLGSHLHSRNLEFWEFELNYLDSKGESLCEIQDM 412

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN- 435
           L+VSY+GL   E+ +FLD A FFK  ++  V + LDAC F A  GI  L  K+L+TISN 
Sbjct: 413 LRVSYNGLKAPEKEMFLDIAFFFKDENKDFVTSILDACGFDATSGIHILKDKALITISND 472

Query: 436 NKITMHDLLQEMGGEIV---RQESIKDPGKRSRLWHPEDIYQVLNENTSLPT---GINLD 489
           NKI MHDL Q++  +IV   + +  +DP K SRL   E++  +L  N        GI  D
Sbjct: 473 NKIQMHDLHQKLAFDIVQYKKDQRRRDPRKCSRLRDIEEVCGLLKNNKGTHNKIEGITFD 532

Query: 490 --------------------------------SLKELY------LGGCSNL--------- 502
                                            L  LY      +  C  L         
Sbjct: 533 LTQKVDLHIQDDTFNLITKLRFLRLHVPLGKKRLTNLYHPDQGIMPFCDKLRYLEWYGYP 592

Query: 503 -KRFPEISCN--IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
            K  P+  C   + ++ L  + +E L   I  L  L  +DLT C  L  +   L     L
Sbjct: 593 SKSLPQPFCAELLVEIRLPHSHVEHLWYGIQELVNLEGIDLTECKQLVELPD-LSKATRL 651

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           + L LSGC             ESL          E  PS+      L  L L  CK+L++
Sbjct: 652 KWLFLSGC-------------ESLS---------EVHPSTFHN-DTLVTLLLDRCKKLEN 688

Query: 620 LPELPCGSSIHARHCTSLKTL 640
           L        +  +H TSLK +
Sbjct: 689 L--------VCEKHLTSLKNI 701



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 97/198 (48%), Gaps = 36/198 (18%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L SLK + + GCS+L  F   S +IE LDL  T ++ L  SIG +S    L+L     L
Sbjct: 694 HLTSLKNIDVNGCSSLIEFSLSSDSIEGLDLSNTMVKTLHPSIGRMSNFSWLNLQGLR-L 752

Query: 547 KSVSSRLCNLKSLRRLNLSGCL-----KLEK-------------------------LPEE 576
           ++V   L +L+SL +L +S C      KLE+                         LP  
Sbjct: 753 QNVPKELSHLRSLTQLWISNCSVVTKSKLEEIFECHNGLESLLKTLVLKDCCNLFELPTN 812

Query: 577 IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
           I +L  L  L L   + + +P+++K LS L+ L L NCK L SLP+LP     + A +CT
Sbjct: 813 IDSLSFLYELRLDGSNVKMLPTNIKYLSNLTILSLNNCKMLVSLPQLPEHIKELRAENCT 872

Query: 636 SLKTLSNSSTLLTRSSKH 653
           SL  +S   T+    SKH
Sbjct: 873 SLVEVSTLKTM----SKH 886


>gi|12056928|gb|AAG48132.1|AF322632_1 putative resistance protein [Glycine max]
          Length = 1093

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 250/750 (33%), Positives = 353/750 (47%), Gaps = 159/750 (21%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R +F  +L   L +  I TFI D     G EI  SLS AIE S++ ++
Sbjct: 14  YDVFLSFRGEDTRRSFTGNLYNCLEKRGIHTFIGDYDFESGEEIKASLSEAIEHSRVFVI 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSLG------ 123
           +FSE YASS WCL+ LV+IL+      + V+PVF+ V+PS        Y  +L       
Sbjct: 74  VFSENYASSSWCLDGLVRILDFTEDNHRPVIPVFFDVEPSHVRHQKGIYGEALAMHERRL 133

Query: 124 ---------WMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                    W        +            E  LIE  V DIS K+    P    D+ V
Sbjct: 134 NPESYKVMKWRNALRQAANLSGYAFKHGDGYEYKLIEKIVEDISNKIKISRPV--VDRPV 191

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G+E  + E++  L + S    + +GI GIGGIGKTT+A A+Y + + HF+ S F+ N+R+
Sbjct: 192 GLEYRMLEVDWLLDATSLAGVHMIGICGIGGIGKTTLARAVYHSAAGHFDTSCFLGNVRE 251

Query: 222 ESEKVGGLA-------------NIHL-------NFERRRLSRMKVLIVFYDLTDLKQIDL 261
            + K G +              NI L       +  ++ L R ++L+V  D+ +L  +  
Sbjct: 252 NAMKHGLVHLQQTLLAEIFRENNIRLTSVEQGISLIKKMLPRKRLLLVLDDVCELDDLRA 311

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G  D F PGSRVIITTRD  LLK H    V  V+EV+ L+  ++L L    AF  +  
Sbjct: 312 LVGSPDWFGPGSRVIITTRDRHLLKAHG---VDKVYEVEVLANGEALELLCWKAFRTDRV 368

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              F+   N  I +A+G+PLAL+++GS L G   EEWES +++ ++ P  DI   LK+S+
Sbjct: 369 HPDFINKLNRAITFASGIPLALELIGSSLYGRGIEEWESTLDQYEKNPPRDIHMALKISF 428

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGKSLVTI-SNNKIT 439
           D L   E+ +FLD ACFF G +   + + L A      K  I  LV KSL+ I  + ++ 
Sbjct: 429 DALGYLEKEVFLDIACFFNGFELAEIEHILGAHHGCCLKFHIGALVEKSLIMIDEHGRVQ 488

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------------------- 480
           MHDL+Q+MG EIVRQES + PGKRSRLW  EDI  VL +NT                   
Sbjct: 489 MHDLIQQMGREIVRQESPEHPGKRSRLWSTEDIVHVLEDNTGTCKIQSIILDFSKSEKVV 548

Query: 481 -----------SLPTGI----------NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE 519
                      SL T I          N   LK L   GC + K  P       D   ++
Sbjct: 549 QWDGMAFVKMISLRTLIIRKMFSKGPKNFQILKMLEWWGCPS-KSLP------SDFKPEK 601

Query: 520 TAIEELPSS--------------IGNLSR---------------LVDLDLTNCSGLKSVS 550
            AI +LP S              + N  R               L +L    C  L  + 
Sbjct: 602 LAILKLPYSGFMSLELPNFLHMRVLNFDRCEFLTRTPDLSGFPILKELFFVFCENLVEIH 661

Query: 551 SRLCNLKSLRRLNLSGCLKLEK----------------------LPEEIGNLESLEYLNL 588
             +  L  L  +N  GC KLE                        PE +G +E++ +L+L
Sbjct: 662 DSVGFLDKLEIMNFEGCSKLETFPPIKLTSLESINLSHCSSLVSFPEILGKMENITHLSL 721

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
                 K+P+S+++L +L  L L NC  +Q
Sbjct: 722 EYTAISKLPNSIRELVRLQSLELHNCGMVQ 751



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 38/192 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I L SL+ + L  CS+L  FPEI     NI  L L+ TAI +LP+SI  L RL  L+L N
Sbjct: 687 IKLTSLESINLSHCSSLVSFPEILGKMENITHLSLEYTAISKLPNSIRELVRLQSLELHN 746

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGC--LKLEKLPEEIGN--------------------- 579
           C G+  + S +  L+ L  L++  C  L+  K  E++ N                     
Sbjct: 747 C-GMVQLPSSIVTLRELEVLSICQCEGLRFSKQDEDVKNKSLLMPSSYLKQVNLWSCSIS 805

Query: 580 ----------LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SS 628
                       +++ L+L+  +F  +PS +++   L  L L  C  L  +  +P    +
Sbjct: 806 DEFIDTGLAWFANVKSLDLSANNFTILPSCIQECRLLRKLYLDYCTHLHEIRGIPPNLET 865

Query: 629 IHARHCTSLKTL 640
           + A  CTSLK L
Sbjct: 866 LSAIRCTSLKDL 877



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 23/131 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           LD L+ +   GCS L+ FP I                       L+ L  ++L++CS L 
Sbjct: 667 LDKLEIMNFEGCSKLETFPPI----------------------KLTSLESINLSHCSSLV 704

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           S    L  ++++  L+L     + KLP  I  L  L+ L L      ++PSS+  L +L 
Sbjct: 705 SFPEILGKMENITHLSLEYT-AISKLPNSIRELVRLQSLELHNCGMVQLPSSIVTLRELE 763

Query: 608 DLRLQNCKRLQ 618
            L +  C+ L+
Sbjct: 764 VLSICQCEGLR 774


>gi|224145028|ref|XP_002325500.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862375|gb|EEE99881.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 709

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 192/502 (38%), Positives = 274/502 (54%), Gaps = 73/502 (14%)

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERR---------- 239
           +GGIGKTTIA A++++ISS +E   F+ N+R++SE+ GGL  +   F  R          
Sbjct: 1   MGGIGKTTIAEAVFNSISSQYESCCFITNVREKSEECGGLIRLREEFLSRVLEQENLRID 60

Query: 240 -----------RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
                      R+   KV  V  D++D++Q++ LI R D F PGSR+++T+RD Q+LKN 
Sbjct: 61  TPRMGSTLIKERIRHKKVFTVLDDVSDVEQVECLIERHDMFGPGSRILVTSRDRQVLKN- 119

Query: 289 RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
                  ++EV+EL+ +++  LFS + F  NH    +  LS   + YA G PLAL+VLGS
Sbjct: 120 ---VADEIYEVEELNCSEARQLFSLSVFKGNHIPKDYKGLSIRAVNYAKGNPLALKVLGS 176

Query: 349 YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVM 408
           +L    +E+WE+A+NKL+R P + I  +LKVS+D L DEE+NIFLD ACFFKG     V 
Sbjct: 177 FLFDQRKEDWENALNKLERNPQLKIYNMLKVSFDALGDEEKNIFLDIACFFKGKQIDYVK 236

Query: 409 NFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
             LD C FS  IG+  L  + L+TISN K+ MHDLLQEM  EIVRQESIK+ GKRSRLW 
Sbjct: 237 RILDGCGFSTNIGVFFLAERCLITISNGKLEMHDLLQEMAFEIVRQESIKELGKRSRLWS 296

Query: 469 PEDIYQVLNEN--TSLPTGINLDS--LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE 524
           P D+ QVL +N  T    GI  D+  +KE+ L   +  + +      I + ++ +     
Sbjct: 297 PRDVNQVLTKNLGTEKVEGIFFDTSKIKEIKLSSKAFARMYNLRLLKIYNSEVGKNCKVY 356

Query: 525 LPSSIGNLS-----------------------RLVDLDLTNCSGLK-------------- 547
           LP  + +LS                        LV+L+L++    +              
Sbjct: 357 LPHGLKSLSDELRYLHWDGYPLKSLPSNFHPENLVELNLSHSKVRELWKGDQVWFSQYTY 416

Query: 548 SVSSRLCNLKSLRR----LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           +  +     +SL R    LNLSGC  L+  PE     E + YLN  E   +++P S+   
Sbjct: 417 AAQAFRVFQESLNRKISALNLSGCSNLKMYPE---TTEHVMYLNFNETAIKELPQSIGHR 473

Query: 604 SKLSDLRLQNCKRLQSLPELPC 625
           S+L  L L+ CK+L +LPE  C
Sbjct: 474 SRLVALNLRECKQLGNLPESIC 495



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 5/149 (3%)

Query: 494 LYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRL 553
           L L GCSNLK +PE + ++  L+  ETAI+ELP SIG+ SRLV L+L  C  L ++   +
Sbjct: 435 LNLSGCSNLKMYPETTEHVMYLNFNETAIKELPQSIGHRSRLVALNLRECKQLGNLPESI 494

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
           C LKS+  +++SGC  + K P   GN     YL L+    E+ PSS+  LS++S L L N
Sbjct: 495 CLLKSIVIVDVSGCSNVTKFPNIPGN---TRYLYLSGTAVEEFPSSVGHLSRISSLDLSN 551

Query: 614 CKRLQSLP-ELPCGSSIH-ARHCTSLKTL 640
             RL++LP E     +I    HC S + L
Sbjct: 552 SGRLKNLPTEFSSSVTIQLPSHCPSSELL 580



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 481 SLPTGINL-DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           +LP  I L  S+  + + GCSN+ +FP I  N   L L  TA+EE PSS+G+LSR+  LD
Sbjct: 489 NLPESICLLKSIVIVDVSGCSNVTKFPNIPGNTRYLYLSGTAVEEFPSSVGHLSRISSLD 548

Query: 540 LTNCSGLKSVSSRL 553
           L+N   LK++ +  
Sbjct: 549 LSNSGRLKNLPTEF 562


>gi|105922468|gb|ABF81418.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 581

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 189/468 (40%), Positives = 270/468 (57%), Gaps = 41/468 (8%)

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERR---------- 239
           +GGIGKTTIA A++++ISS +E   F+ N+R++SE+ GGL  +   F  R          
Sbjct: 1   MGGIGKTTIAEAVFNSISSQYESCCFITNVREKSEECGGLIRLREEFLSRVLEQENLRID 60

Query: 240 -----------RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
                      R+   KV  V  D++D++Q++ LI R D F PGSR+++T+RD Q+LKN 
Sbjct: 61  TPRMGSTLIKERIRHKKVFTVLDDVSDVEQVECLIERHDMFGPGSRILVTSRDRQVLKN- 119

Query: 289 RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
                  ++EV+EL+ +++  LFS + F  NH    +  LS   + YA G PLAL+VLGS
Sbjct: 120 ---VADEIYEVEELNCSEARQLFSLSVFKGNHIPKDYKGLSIRAVNYAKGNPLALKVLGS 176

Query: 349 YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVM 408
           +L    +E+WE+A+NKL+R P + I  +LKVS+D L DEE+NIFLD ACFFKG     V 
Sbjct: 177 FLFDQRKEDWENALNKLERNPQLKIYNMLKVSFDALGDEEKNIFLDIACFFKGKQIDYVK 236

Query: 409 NFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
             LD C FS  IG+  L  + L+TISN K+ MHDLLQEM  EIVRQESIK+ GKRSRLW 
Sbjct: 237 RILDGCGFSTNIGVFFLAERCLITISNGKLEMHDLLQEMAFEIVRQESIKELGKRSRLWS 296

Query: 469 PEDIYQVLNEN--TSLPTGINLDS--LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE 524
           P D+ QVL +N  T    GI  D+  +KE+ L   +  + +      I + ++ +     
Sbjct: 297 PRDVNQVLTKNLGTEKVEGIFFDTSKIKEIKLSSKAFARMYNLRLLKIYNSEVGKNCKVY 356

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL-------PEEI 577
           LP  + +LS  +     +   LKS+ S   + ++L  LNLS   K+ +L       PE  
Sbjct: 357 LPHGLKSLSDELRYLHWDGYPLKSLPSNF-HPENLVELNLSHS-KVRELWKGDQMYPE-- 412

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
              E + YLN  E   +++P S+   S+L  L L+ CK+L +LPE  C
Sbjct: 413 -TTEHVMYLNFNETAIKELPQSIGHRSRLVALNLRECKQLGNLPESIC 459



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 13/116 (11%)

Query: 467 WHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP 526
           +HPE++ ++          ++   ++EL+ G     + +PE + ++  L+  ETAI+ELP
Sbjct: 385 FHPENLVEL---------NLSHSKVRELWKGD----QMYPETTEHVMYLNFNETAIKELP 431

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
            SIG+ SRLV L+L  C  L ++   +C LKS+  +++SGC  + K P   GN  S
Sbjct: 432 QSIGHRSRLVALNLRECKQLGNLPESICLLKSIVIVDVSGCSNVTKFPNIPGNTRS 487


>gi|357474625|ref|XP_003607597.1| NBS resistance protein [Medicago truncatula]
 gi|355508652|gb|AES89794.1| NBS resistance protein [Medicago truncatula]
          Length = 1278

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 230/706 (32%), Positives = 347/706 (49%), Gaps = 118/706 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R NF+ HL AAL R+ I  F DD  L +G  I P L  AIEGS++ I 
Sbjct: 22  YDVFVTFRGEDTRFNFIDHLFAALQRKGIFAFRDDTNLQKGESIPPELIRAIEGSQVFIA 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL------------ 122
           + S+ YASS WCL ELV IL+     G+ V+PVFY VDPS+  +   +            
Sbjct: 82  VLSKNYASSTWCLRELVHILDCSQVSGRRVLPVFYDVDPSEVRHQKGIYGEAFSKHEQTF 141

Query: 123 ---------------------GWMGIFDIPTSESV--LIEGNVNDISKKLSDLFPSDNKD 159
                                GW  + D P    +  ++E  +N +    S L       
Sbjct: 142 QHESHVVQSWREALTQVGNISGW-DLRDKPQYAEIKKIVEEILNILGHNFSSL-----PK 195

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           +LVG+   I+++ + LL  S +    VGI G+GGIGKTT+ +A+Y  IS  F+   F+ +
Sbjct: 196 ELVGMNPHIEKVVNLLLLDSVDDVRVVGICGMGGIGKTTLTTALYGQISHQFDARCFIDD 255

Query: 219 ---IRDESEKVGGLANI-HLNFERRRLSRMKVLIVFYDLTD------------------- 255
              I     +VG    I H  F +        +   +D  D                   
Sbjct: 256 LSKIYRHDGQVGAQKQILHQTFGKEHFQ----ICNLFDTDDLIRRRLRRLRALIILDNVD 311

Query: 256 -LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
            ++Q+D L    +    GSR+II +RD  +L N  G  V  V++V  L+  +SL LF + 
Sbjct: 312 KVEQLDKLALNREYLGAGSRIIIISRDEHIL-NEYG--VDEVYKVPLLNETNSLQLFCQK 368

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF   H  +G+ +++   + YANG+PLA++VLGS+L G    EW S + +L+  P  DI 
Sbjct: 369 AFKLEHVMSGYDKMALDTLSYANGLPLAIKVLGSFLFGRDISEWRSKLARLRECPIKDIM 428

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            VL++S++GL++ E++IFLD ACFFKG ++  V N L+   F A IG+  L+ KSL++IS
Sbjct: 429 DVLRLSFEGLENMEKDIFLDIACFFKGYNKECVTNILNCRGFHADIGLRILIDKSLISIS 488

Query: 435 -NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLW-----------------------HPE 470
               ITMH LL E+G +IV++ S KD  K SRLW                       HP 
Sbjct: 489 YGTNITMHSLLVELGRKIVQENSTKDLRKWSRLWSLEHFNNVMLENMEKNVEAVVICHPR 548

Query: 471 DIYQVLNENTSLPTGINLDSL-KELYLGGC----SNLKRFPEISC-------------NI 512
            I  ++ E  S  + + L    + +Y+ G     SN  R+ + +C              +
Sbjct: 549 QIKTLVAETLSSMSHLRLLIFDRGVYISGSLNYLSNELRYFKWTCYPFMCLPKSFQPNQL 608

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            +L L  ++I++L      L  L  +DL     L  + +    + +L RLNL GC+ L +
Sbjct: 609 VELYLWRSSIQQLWEGKKYLPNLKTMDLMYSKHLIKMPN-FGEVPNLERLNLDGCVNLVQ 667

Query: 573 LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           +   IG L  L +LNL   K+   IP+++  L+ L  L L  C ++
Sbjct: 668 IDPSIGLLRKLVFLNLKNCKNLISIPNNIFGLTSLKYLNLSWCSKV 713



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
            +DVF+SF+GKD R+NF+ HL A+  R+ I  F DD  L +G  I+P
Sbjct: 1233 YDVFVSFKGKDTRYNFIDHLFASFRRKGIIAFKDDAMLKKGESIAP 1278



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 6/120 (5%)

Query: 466 LWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEE 524
           LW    I Q+      LP   NL ++  +Y      +  F E+  N+E L+L     + +
Sbjct: 613 LWR-SSIQQLWEGKKYLP---NLKTMDLMYSKHLIKMPNFGEVP-NLERLNLDGCVNLVQ 667

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           +  SIG L +LV L+L NC  L S+ + +  L SL+ LNLS C K+      +  L+S E
Sbjct: 668 IDPSIGLLRKLVFLNLKNCKNLISIPNNIFGLTSLKYLNLSWCSKVFTNTRHLNKLDSSE 727



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L++S C  L ++P+ IG +  L  L L   +F  +PS  ++LS L  L LQ+CK+L+ LP
Sbjct: 764 LDISFC-GLSQMPDAIGCIPWLGRLILMGNNFVTLPS-FRELSNLVYLDLQHCKQLKFLP 821

Query: 622 ELPCGSS 628
           ELP   S
Sbjct: 822 ELPLPHS 828


>gi|227438191|gb|ACP30585.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1301

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 232/690 (33%), Positives = 351/690 (50%), Gaps = 93/690 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G+DVR  F+SH    L R+ I  F D+++ R   + P L  AI+ S+I++VI
Sbjct: 15  YDVFPSFSGEDVRKTFLSHFMKELNRKLITAFKDNEIERSRSLDPELRQAIKDSRIAVVI 74

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YCPS-- 121
           FS  YASS WCLNEL++I+  K +  Q+V+PVFY +DPS       D G      C +  
Sbjct: 75  FSTNYASSSWCLNELLEIVRCKEECAQMVIPVFYGLDPSHVRKQTGDFGKIFDKTCQNKT 134

Query: 122 ----LGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W   + D+            +E+ +I+   ND+  KL ++ PS   +  VG+E 
Sbjct: 135 EDEIILWREALTDVANILGYHSVTWDNEARMIDEIANDVLGKL-NVSPSYEVEDFVGIED 193

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ--------- 217
            I+ + S L   S E   VGIWG  GIGKTTIA A++S +S  F+ S F+          
Sbjct: 194 HIRAMSSLLEFESEEVRMVGIWGPSGIGKTTIARALFSRLSRRFQSSAFVDKVFISKNMD 253

Query: 218 -----NIRDESEKV----GGLANI---------HLNFERRRLSRMKVLIVFYDLTDLKQI 259
                N+ D + K+      LA +         H+    + L   K LI   DL D   +
Sbjct: 254 VYRGANLGDYNMKLHLQRAFLAELLDNRDIKIDHIGAVEKMLRHRKALIFIDDLDDQDVL 313

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           D L GR   F  GSR+I+ T+D   L+ H    + H++EV   S + +L +F R+AF +N
Sbjct: 314 DALAGRTQWFGSGSRIIVVTKDKHFLRAHG---IDHIYEVCLPSKDLALEIFCRSAFRRN 370

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  GF+EL++ V+  A  +PL L VLGS L+G  +E+W   + +L+      I++ L+ 
Sbjct: 371 SPPDGFMELASEVVFCAGNLPLGLDVLGSNLRGRDKEDWLDMLPRLRTSLDRKIERTLRA 430

Query: 380 SYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           SYDGL++ +++ IF   AC F G     +   L+       IG+  LV KSL+    N +
Sbjct: 431 SYDGLNNKKDKAIFRHVACLFSGRKVDHIKLLLEDRNLDVNIGLKNLVDKSLIHERFNTV 490

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINL--DSLKEL 494
            MH LLQEMG EIVR +S  +PG+R  L   +DI+ VL +NT      GI L  D   EL
Sbjct: 491 EMHSLLQEMGKEIVRAQS-DEPGEREFLMDSKDIWDVLEDNTGTKRVLGIELIMDETDEL 549

Query: 495 YL-----GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS---------------- 533
           ++      G  NL+      CN+  L L +   + LP S+  LS                
Sbjct: 550 HVHENAFKGMCNLRFLEIFGCNVVRLHLPKN-FDYLPPSLRLLSWHGYPMRCMPSKFQPE 608

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEK 591
            L+ L +     L+ +   + +L  L+ ++L+  + L+++P+  +  NLE L  L+    
Sbjct: 609 NLIKL-VMRAGNLEKLWEGVASLTCLKEIDLTLSVNLKEIPDLSKAMNLERL-CLDFCSS 666

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             E +PSS++ L KL DL +  C  L+++P
Sbjct: 667 LLE-LPSSIRNLKKLRDLEMNFCTNLETIP 695



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 39/175 (22%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIED-------------------------- 514
           ++PTGI L+S +   L GCS L+RFPEI  NI +                          
Sbjct: 693 TIPTGIYLNSFEGFVLSGCSRLRRFPEILTNISESPSYLTLDVLNMTNLRSENLWEGVQQ 752

Query: 515 --------LDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
                   L L E  ++ ELPSS  NL++L  LD+ NC  L+++ + + NL+SL  L LS
Sbjct: 753 PFTTLMTRLQLSEIPSLVELPSSFQNLNKLKWLDIRNCINLETLPTGI-NLQSLEYLVLS 811

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           GC +L   P    N++   YL L+    E++P  +++ S L DL + NC  L+ +
Sbjct: 812 GCSRLRSFPNISRNIQ---YLKLSFSAIEEVPWWVEKFSALKDLNMANCTNLRRI 863



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           DI   +N  T LPTGINL SL+ L L GCS L+ FP IS NI+ L L  +AIEE+P  + 
Sbjct: 786 DIRNCINLET-LPTGINLQSLEYLVLSGCSRLRSFPNISRNIQYLKLSFSAIEEVPWWVE 844

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
             S L DL++ NC+ L+ +S  +  LK L+    S C
Sbjct: 845 KFSALKDLNMANCTNLRRISLNILKLKHLKVALFSNC 881



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 67/267 (25%)

Query: 421 GISRLVGKSLVTISNNKITMHD----------LLQEMGGEIVRQESIKD-----PGKRSR 465
           G  R++G  L+    +++ +H+           L+  G  +VR    K+     P  R  
Sbjct: 532 GTKRVLGIELIMDETDELHVHENAFKGMCNLRFLEIFGCNVVRLHLPKNFDYLPPSLRLL 591

Query: 466 LWH------------PEDIYQVLNENTSLPT---GI-NLDSLKELYLGGCSNLKRFPEIS 509
            WH            PE++ +++    +L     G+ +L  LKE+ L    NLK  P++S
Sbjct: 592 SWHGYPMRCMPSKFQPENLIKLVMRAGNLEKLWEGVASLTCLKEIDLTLSVNLKEIPDLS 651

Query: 510 --CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
              N+E L L   +++ ELPSSI NL +L DL++  C+ L+++ + +  L S     LSG
Sbjct: 652 KAMNLERLCLDFCSSLLELPSSIRNLKKLRDLEMNFCTNLETIPTGI-YLNSFEGFVLSG 710

Query: 567 CLKLEKLPEEIGNL-ESLEYLNL---------AEKDFE---------------------- 594
           C +L + PE + N+ ES  YL L         +E  +E                      
Sbjct: 711 CSRLRRFPEILTNISESPSYLTLDVLNMTNLRSENLWEGVQQPFTTLMTRLQLSEIPSLV 770

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           ++PSS + L+KL  L ++NC  L++LP
Sbjct: 771 ELPSSFQNLNKLKWLDIRNCINLETLP 797


>gi|12322541|gb|AAG51270.1|AC027135_11 disease resistance gene, putative [Arabidopsis thaliana]
          Length = 1198

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 250/742 (33%), Positives = 364/742 (49%), Gaps = 120/742 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG+DVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSHNWL----YDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   IV+PVFY VDPS   +  
Sbjct: 57  DLEQAIKESRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IVIPVFYHVDPSQVRH-- 111

Query: 121 SLGWMG-IFDIP-------------------------------TSESVLIEGNVNDISKK 148
            +G  G IF+                                   E+ +IE   ND+  K
Sbjct: 112 QIGDFGKIFENTCKRQTDEEVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGK 171

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L    P D+ ++LVG+E  I E+   L   S E   VGI G  GIGKTTIA A++  +S 
Sbjct: 172 LLLTTPKDS-EELVGIEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSR 230

Query: 209 HFEGSYFMQ--------------NIRDESEKVG----------GLANIHLNFE---RRRL 241
           HF+GS F+               N  D + K+           G  +I ++       RL
Sbjct: 231 HFQGSTFIDRAFVSYSRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERL 290

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
              KVLI+  DL D+  +D L+G+   F  GSR+I+ T D   L  H    + H++EV  
Sbjct: 291 KHQKVLIIIDDLDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLIAH---GIDHIYEVSF 347

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
            +   +  +  ++AF QN+   GF +L   V+++A   PL L +LG YL+    E W   
Sbjct: 348 PTDVHACQMLCQSAFKQNYAPKGFEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDM 407

Query: 362 VNKLKRMPHMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
           + +L+    +D  I+K+L++SYDGL+ E+Q IF   AC F   +   + + L     S  
Sbjct: 408 LPRLENSLRIDGKIEKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS-- 465

Query: 420 IGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
             +  L  KSL+ +    + MH  LQEMG +IVR +SI  PG+R  L  P DI+ +LN  
Sbjct: 466 FALENLADKSLIHVRQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNAC 525

Query: 480 TSLPT--GINLD-------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           T      GI+LD        + E    G SNL RF E    I++  LKE  +  LP S  
Sbjct: 526 TGTQKVLGISLDIRNIRELDVHERAFKGMSNL-RFLE----IKNFGLKEDGL-HLPPSFD 579

Query: 531 NLSR-----------------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            L R                       LV L++   S L  +   +  L  L+ ++L G 
Sbjct: 580 YLPRTLKLLCWSKFPMRCMPFGFRPENLVKLEM-QYSKLHKLWEGVAPLTCLKEMDLHGS 638

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---EL 623
             L+ +P ++    +LE LNL   +   ++PSS++ L+KL +L + NCK L+ LP    L
Sbjct: 639 SNLKVIP-DLSEATNLEILNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNL 697

Query: 624 PCGSSIHARHCTSLKTLSNSST 645
                ++  HC+ LKT    ST
Sbjct: 698 KSLDRLNLYHCSKLKTFPKFST 719



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 54/93 (58%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L   GCS L+ FPEIS NI  L L ETAIEE+P  I   S L +L +
Sbjct: 813 TLPTGINLQSLDYLCFSGCSQLRSFPEISTNISVLYLDETAIEEVPWWIEKFSNLTELSM 872

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            +CS LK V   +  LK L+      C  L ++
Sbjct: 873 NSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRV 905



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 85/193 (44%), Gaps = 56/193 (29%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD---- 537
           LPTG NL SL  L L  CS LK FP+ S NI  L+L  T IE+ PS++ +L  LV+    
Sbjct: 691 LPTGFNLKSLDRLNLYHCSKLKTFPKFSTNISVLNLNLTNIEDFPSNL-HLENLVEFRIS 749

Query: 538 -----------------------------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
                                        L L N   L  ++S   NL  L+ L +  C+
Sbjct: 750 KEESDEKQWEEEKPLTPFLAMMLSPTLTSLHLENLPSLVELTSSFQNLNQLKDLIIINCI 809

Query: 569 KLEKLPEEIGNLESLEY---------------------LNLAEKDFEKIPSSMKQLSKLS 607
            LE LP  I NL+SL+Y                     L L E   E++P  +++ S L+
Sbjct: 810 NLETLPTGI-NLQSLDYLCFSGCSQLRSFPEISTNISVLYLDETAIEEVPWWIEKFSNLT 868

Query: 608 DLRLQNCKRLQSL 620
           +L + +C RL+ +
Sbjct: 869 ELSMNSCSRLKCV 881


>gi|12597847|gb|AAG60157.1|AC074360_22 downy mildew resistance protein RPP5, putative [Arabidopsis
           thaliana]
          Length = 1202

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 250/742 (33%), Positives = 364/742 (49%), Gaps = 120/742 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG+DVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSHNWL----YDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   IV+PVFY VDPS   +  
Sbjct: 57  DLEQAIKESRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IVIPVFYHVDPSQVRH-- 111

Query: 121 SLGWMG-IFDIP-------------------------------TSESVLIEGNVNDISKK 148
            +G  G IF+                                   E+ +IE   ND+  K
Sbjct: 112 QIGDFGKIFENTCKRQTDEEVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGK 171

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L    P D+ ++LVG+E  I E+   L   S E   VGI G  GIGKTTIA A++  +S 
Sbjct: 172 LLLTTPKDS-EELVGIEDHIAEMSLLLQLESKEVRMVGISGSSGIGKTTIARALFKRLSR 230

Query: 209 HFEGSYFMQ--------------NIRDESEKVG----------GLANIHLNFE---RRRL 241
           HF+GS F+               N  D + K+           G  +I ++       RL
Sbjct: 231 HFQGSTFIDRAFVSYSRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERL 290

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
              KVLI+  DL D+  +D L+G+   F  GSR+I+ T D   L  H    + H++EV  
Sbjct: 291 KHQKVLIIIDDLDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLIAH---GIDHIYEVSF 347

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
            +   +  +  ++AF QN+   GF +L   V+++A   PL L +LG YL+    E W   
Sbjct: 348 PTDVHACQMLCQSAFKQNYAPKGFEDLVVDVVRHAGNFPLGLNLLGKYLRRRDMEYWMDM 407

Query: 362 VNKLKRMPHMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
           + +L+    +D  I+K+L++SYDGL+ E+Q IF   AC F   +   + + L     S  
Sbjct: 408 LPRLENSLRIDGKIEKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS-- 465

Query: 420 IGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
             +  L  KSL+ +    + MH  LQEMG +IVR +SI  PG+R  L  P DI+ +LN  
Sbjct: 466 FALENLADKSLIHVRQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNAC 525

Query: 480 TSLPT--GINLD-------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           T      GI+LD        + E    G SNL RF E    I++  LKE  +  LP S  
Sbjct: 526 TGTQKVLGISLDIRNIRELDVHERAFKGMSNL-RFLE----IKNFGLKEDGL-HLPPSFD 579

Query: 531 NLSR-----------------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            L R                       LV L++   S L  +   +  L  L+ ++L G 
Sbjct: 580 YLPRTLKLLCWSKFPMRCMPFGFRPENLVKLEM-QYSKLHKLWEGVAPLTCLKEMDLHGS 638

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---EL 623
             L+ +P ++    +LE LNL   +   ++PSS++ L+KL +L + NCK L+ LP    L
Sbjct: 639 SNLKVIP-DLSEATNLEILNLKFCESLVELPSSIRNLNKLLNLDMLNCKSLKILPTGFNL 697

Query: 624 PCGSSIHARHCTSLKTLSNSST 645
                ++  HC+ LKT    ST
Sbjct: 698 KSLDRLNLYHCSKLKTFPKFST 719



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 54/93 (58%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L   GCS L+ FPEIS NI  L L ETAIEE+P  I   S L +L +
Sbjct: 813 TLPTGINLQSLDYLCFSGCSQLRSFPEISTNISVLYLDETAIEEVPWWIEKFSNLTELSM 872

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            +CS LK V   +  LK L+      C  L ++
Sbjct: 873 NSCSRLKCVFLHMSKLKHLKEALFRNCGTLTRV 905



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 85/193 (44%), Gaps = 56/193 (29%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD---- 537
           LPTG NL SL  L L  CS LK FP+ S NI  L+L  T IE+ PS++ +L  LV+    
Sbjct: 691 LPTGFNLKSLDRLNLYHCSKLKTFPKFSTNISVLNLNLTNIEDFPSNL-HLENLVEFRIS 749

Query: 538 -----------------------------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
                                        L L N   L  ++S   NL  L+ L +  C+
Sbjct: 750 KEESDEKQWEEEKPLTPFLAMMLSPTLTSLHLENLPSLVELTSSFQNLNQLKDLIIINCI 809

Query: 569 KLEKLPEEIGNLESLEY---------------------LNLAEKDFEKIPSSMKQLSKLS 607
            LE LP  I NL+SL+Y                     L L E   E++P  +++ S L+
Sbjct: 810 NLETLPTGI-NLQSLDYLCFSGCSQLRSFPEISTNISVLYLDETAIEEVPWWIEKFSNLT 868

Query: 608 DLRLQNCKRLQSL 620
           +L + +C RL+ +
Sbjct: 869 ELSMNSCSRLKCV 881


>gi|399920221|gb|AFP55568.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1143

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 244/738 (33%), Positives = 369/738 (50%), Gaps = 114/738 (15%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKL-NRGNEISP 60
           ASSSS++      K+DVFLSFRG+D R  F  +L   L R  I TF DD L  RG  ISP
Sbjct: 9   ASSSSALQW----KYDVFLSFRGEDTRKGFTDYLYHELERRGIRTFRDDPLLERGTAISP 64

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQI--------VVPVFYLVD 112
            L +AI+ S+ +IV+ S  YA+S WCL EL KILE  ++ GQI        ++P+FY VD
Sbjct: 65  ELLTAIKQSRFAIVVLSPNYATSTWCLLELSKILECMDERGQILPMHERGQILPIFYEVD 124

Query: 113 PSDA--------------------------GYCPSLGWMGIFDIPTSESVLIEGNV-NDI 145
           PS                            G+  +L  +      TS+    E  +  +I
Sbjct: 125 PSHVRHQRGNFAEAFQEHEEKFGVGNKKVEGWRDALTKVASLAGWTSKDYRYETQIIKEI 184

Query: 146 SKKL-SDLFPS----DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIAS 200
            ++L S + PS     + ++L G+++  +EI+  L   + +   +GIWG+GG+GKTT+A 
Sbjct: 185 VQELWSKVHPSLTVFGSLEKLFGMDTKWEEIDVLLDKKANDVRFIGIWGMGGMGKTTLAR 244

Query: 201 AIYSNISSHFEGSYFMQNIRDESEKVG------------------GLANIH--LNFERRR 240
            +Y  IS  FE   F+ N+R+ S   G                   + +++  +   +R 
Sbjct: 245 LVYQKISHQFEVCIFLANVREVSATHGLVCLQNQILSQILKEGNDQVWDVYSGITMIKRC 304

Query: 241 LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVK 300
                VL+V  D+   +Q++ L G  D F   SR+IITTRD  +L  H    +   +E+K
Sbjct: 305 FRNKAVLLVLDDVDQSEQLEHLAGEKDCFGLRSRIIITTRDRHVLVTHD---IEKPYELK 361

Query: 301 ELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWES 360
            L  +++L LFS  AF ++ P   + E S   ++YA G+PLAL++LGS+L   S + W S
Sbjct: 362 RLGEDEALQLFSWKAFRKHEPEEDYAEQSKSFVRYAGGLPLALKILGSFLYKRSLDSWSS 421

Query: 361 AVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
           A  KLK+ P+  + ++LK+S+DGLD+ E+  FLD ACF +  D   ++  + +  F ++I
Sbjct: 422 AFQKLKQTPNPTVFEILKISFDGLDEMEKKTFLDIACFRRLYDNESMIEQVYSSGFCSRI 481

Query: 421 GISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
            I  LV KSL+ IS  N + MHDL++EMG EIVRQES  +PG RSRLW   DI+ V  +N
Sbjct: 482 AIEVLVEKSLLAISFGNHVYMHDLIREMGCEIVRQESCDEPGGRSRLWLRNDIFHVFTKN 541

Query: 480 --TSLPTGI--NLDSLKE----------------LYLGG---------CSNLKRF----- 505
             T +  GI  +LD L+E                LY+             N  RF     
Sbjct: 542 TGTEVTEGIFLHLDKLEEADWNLEAFSKMCKLKLLYIHNLRLSLGPKYLPNALRFLKWSW 601

Query: 506 -PEIS-------CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
            P IS         + +L L  + I+ L   I  LS L  +DL+  + L + +     + 
Sbjct: 602 YPSISLPPGFQPAELAELSLPYSNIDHLWIGIKYLSNLKSIDLSYSTNL-TRTPDFTGIP 660

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKR 616
            L +L L GC+ L K+   I +L+ L+  N    K  + +P  +  +  L    +  C +
Sbjct: 661 YLEKLILEGCISLVKIHPSIASLKRLKIWNFRNCKSIKSLPGEV-DMEFLETFDVSGCSK 719

Query: 617 LQSLPELPCGSSIHARHC 634
           L+ +PE    +   +R C
Sbjct: 720 LKMIPEFVGQTKRLSRLC 737



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 108/217 (49%), Gaps = 42/217 (19%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR ++W+  +   +     SLP  ++++ L+   + GCS LK  PE    +  +  L L 
Sbjct: 684 KRLKIWNFRNCKSI----KSLPGEVDMEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLG 739

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNCSGLKSVSSR------------------------- 552
            TA+E+LPS I +LS  LV+LDL+     +   SR                         
Sbjct: 740 GTAVEKLPS-IEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSLGLFPRKSPHPLTPL 798

Query: 553 LCNLK---SLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
           L +LK   SL  L L+ C   E +LP +IG+L SL  L L   +F  +P+S+  LSKL  
Sbjct: 799 LASLKHFSSLTELKLNDCNLCEGELPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRY 858

Query: 609 LRLQNCKRLQSLPELPCGS---SIHARHCTSLKTLSN 642
           + ++NCKRLQ LPE P      S++  +CTSL+   +
Sbjct: 859 INVENCKRLQQLPE-PSARGYLSVNTNNCTSLQVFPD 894


>gi|315507079|gb|ADU33175.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus var. hardwickii]
          Length = 1037

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 236/713 (33%), Positives = 341/713 (47%), Gaps = 154/713 (21%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVFLSFRG+D R NF SHLN  L +  I  FID KL+RG EI  SL  AIEGSKISIV+ 
Sbjct: 18  DVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEICASLLEAIEGSKISIVVI 77

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----------------YC 119
           SE YASS WCLNELVKI+      GQ+V+P+FY VDPS+ G                 + 
Sbjct: 78  SESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQSGRFGEEFAKLEVRFFN 137

Query: 120 PSLGWMGIFDIPT-----------SESVLIEGNVNDISKKLS-DLFPSDNKDQLVGVESI 167
               W       +            E+ LI+  V ++ KKL       D     VG++  
Sbjct: 138 KMQAWKEALITVSHMSGWPVLQRDDEANLIQNIVQEVWKKLDRATMQLDVAKYPVGIDIQ 197

Query: 168 IKEIESQLLS-GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
           ++ +   ++S G T F   G++G+GG+GKTTIA A+Y+ I+  FEG  F+ NIR+ S + 
Sbjct: 198 VRNLLPHVMSNGITMF---GLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQY 254

Query: 227 GGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
           GGL                         +   R RL   K+L++  D+   +Q+  L G 
Sbjct: 255 GGLVQFQKELLCEILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDKREQLQALAGG 314

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F  GS+VI TTR+ QLL  H   ++ +   V  L Y+++L LFS + F  +HP   +
Sbjct: 315 HDWFGHGSKVIATTRNKQLLVTHGFDKMQN---VGGLDYDEALELFSWHCFRNSHPLNVY 371

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSE--------EEWESAVNKLKRMPHMDIQKVL 377
           LELS   + Y  G+PLAL+VLGS+L  + +        +E+E      K     DIQ  L
Sbjct: 372 LELSKRAVDYCKGLPLALEVLGSFLNSIGDPSNFKRILDEYE------KHYLDKDIQDSL 425

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-N 436
           ++SYDGL+DE                                 GI++L+  SL+TI   N
Sbjct: 426 RISYDGLEDE---------------------------------GITKLMNLSLLTIGRFN 452

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------------PT 484
           ++ MH+++Q+MG  I   E+ K   KR RL   +D   VLN N               PT
Sbjct: 453 RVEMHNIIQQMGRTIHLSETSKS-HKRKRLLIKDDAMDVLNGNKEARAVKVIKLNFPKPT 511

Query: 485 GINLDS--------LKELYLGGCS-----------------NLKRFPEISC-------NI 512
            +++DS        L  L +G  +                 N  +FP  S        N+
Sbjct: 512 KLDIDSRAFDKVKNLVVLEVGNATSSESSTLEYLPSSLRWMNWPQFPFSSLPTTYTMENL 571

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            +L L  ++I+       +  RL +++L++ + L  +   L    +L+ LNL GC  L K
Sbjct: 572 IELKLPYSSIKHFGQGYMSCERLKEINLSDSNLLVEIPD-LSTAINLKYLNLVGCENLVK 630

Query: 573 LPEEIGNLESLEYLNLAE--KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           + E IG+L  L  L+ +   K FE+ PS +K L  L  L ++NC+  +  P+ 
Sbjct: 631 VHESIGSLSKLVALHFSSSVKGFEQFPSCLK-LKSLKFLSMKNCRIDEWCPQF 682



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 34/179 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDL----KETAIEELPSSIGNLSRLVD 537
            P+ + L SLK L +  C   +  P+ S  ++ ++       T   +L  +IG L+ L  
Sbjct: 656 FPSCLKLKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLSIGYSTVTYQLSPTIGYLTSLKH 715

Query: 538 LDLTNCSGLKSVSS---RLCNLKSLR-------------------------RLNLSGC-- 567
           L L  C  L ++ S   RL NL SL                          +L L GC  
Sbjct: 716 LSLYYCKELTTLPSTIYRLTNLTSLTVLDSNLSTFPFLNHPSLPSSLFYLTKLRLVGCKI 775

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
             L+ L   +    SL+ L+L+E +F ++PS +     L  L   +C+ L+ + ++P G
Sbjct: 776 TNLDFLETIVYVAPSLKELDLSENNFCRLPSCIINFKSLKYLYTMDCELLEEISKVPKG 834


>gi|357474623|ref|XP_003607596.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508651|gb|AES89793.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1039

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 234/719 (32%), Positives = 352/719 (48%), Gaps = 111/719 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R NF+ HL AAL R+ I  F DD  L +G  I P L  AIEGS++ I 
Sbjct: 22  YDVFVTFRGEDTRFNFIDHLFAALQRKGIFAFRDDANLQKGESIPPELIRAIEGSQVFIA 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL------------ 122
           + S+ Y+SS WCL ELV IL+     G+ V+PVFY VDPS+  +   +            
Sbjct: 82  VLSKNYSSSTWCLRELVHILDCSQVSGRRVLPVFYDVDPSEVRHQKGIYGEAFSKHEQTF 141

Query: 123 ---------------------GWMGIFDIPTSESV--LIEGNVNDISKKLSDLFPSDNKD 159
                                GW  + D P    +  ++E  +N +    S L       
Sbjct: 142 QHDSHVVQSWREALTQVGNISGW-DLRDKPQYAEIKKIVEEILNILGHNFSSL-----PK 195

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           +LVG+   I+++ + LL  S +    VGI G+GGIGKTT+A+A+Y  IS  F+   F+ +
Sbjct: 196 ELVGMNPHIEKVVNLLLLDSVDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDD 255

Query: 219 ---IRDESEKVGGLANI-HLNFERRRLSRMKVLIVFYDLTD------------------- 255
              I     +VG    I H    +        +   +D  D                   
Sbjct: 256 LSKIYRHDGQVGAQKQILHQTLGKEHFQ----ICNLFDTDDSIRRRLRRLRALIILDNVD 311

Query: 256 -LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
            ++Q+D L    +    GSR+II +RD  +L N  G  V  V++V  L+  +SL LF + 
Sbjct: 312 KVEQLDKLALNRECLGVGSRIIIISRDEHIL-NEYG--VDEVYKVPLLNETNSLQLFCQK 368

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF  +H  +G+ +L+   + YANG+PLA++VLGS+L G    EW SA+ +LK  P+ DI 
Sbjct: 369 AFKLDHIMSGYDKLALDTLSYANGLPLAIKVLGSFLFGRDISEWRSALARLKESPNKDIM 428

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            VL++S+DGL++ E+ IFLD ACFF+  D+  + N L+ C F   IG+  L+ KSL++  
Sbjct: 429 DVLRLSFDGLENLEKEIFLDIACFFERYDKECLTNILNCCGFHPDIGLRILIDKSLISFY 488

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-------------- 480
           +    MH LL E+G +IV++ S KD  K SRLW PE    V+ EN               
Sbjct: 489 HGGCVMHSLLVELGRKIVQENSTKDLKKWSRLWFPEHFDNVMLENMEKNVQAIVLAYHSP 548

Query: 481 ------SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR 534
                 +  T  N++ ++ L L           +S  +  ++        LP S    ++
Sbjct: 549 RQIKKFAAETLSNMNHIRLLILENTYFSGSLNYLSNELRYVEWNRYPFTYLPKSF-QPNQ 607

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           LV+L L+  S +K +      L +LR ++L     L KLP + G + +LE LNLA   + 
Sbjct: 608 LVELHLSY-SSIKQLWKGKKYLPNLRIMDLMHSRNLIKLP-DFGEVPNLEMLNLAGCVNL 665

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
             IP+S+  L+ L  L L  C ++ + P+              LK L +S T+L   SK
Sbjct: 666 ISIPNSIFVLTSLKYLNLSGCSKVFNYPK-------------HLKKLDSSETVLHSQSK 711



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 10/149 (6%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           S+P  I  L SLK L L GCS +  +P+   +++ LD  ET +     +   +   + L 
Sbjct: 667 SIPNSIFVLTSLKYLNLSGCSKVFNYPK---HLKKLDSSETVLHSQSKTSSLILTTIGLH 723

Query: 540 LTNCSGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
               +  K + SRL +       LR L++S C  L ++P+ IG +  L  L L+  +F  
Sbjct: 724 SLYQNAHKGLVSRLLSSLPSFFFLRELDISFC-GLSQIPDAIGCIRWLGRLVLSGNNFVT 782

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           +PS +++LSKL  L LQ CK+L  LPELP
Sbjct: 783 LPS-LRELSKLVYLDLQYCKQLNFLPELP 810


>gi|224127254|ref|XP_002329438.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870488|gb|EEF07619.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1162

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 247/700 (35%), Positives = 343/700 (49%), Gaps = 134/700 (19%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           HDVFLSFRG+D R  F SHL+AAL R++I TFID +L RG+EIS SL   IE +K+S++I
Sbjct: 47  HDVFLSFRGEDTRVGFTSHLHAALDRKQILTFIDYQLVRGDEISASLLRTIEEAKLSVII 106

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------DA--------- 116
                                       V+PVFY VDPS          DA         
Sbjct: 107 ----------------------------VIPVFYKVDPSHVRNQTGSFGDAFARLIRNKA 138

Query: 117 -------GYCPSL-------GW-MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                   +  +L       GW +G  ++   E+  IE  V D+  KL  +  S     L
Sbjct: 139 LTLEEVQSFREALTDAASLSGWNLGNSEL---EAEFIEKIVGDVLGKLHAMSSSHTMAGL 195

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
            G++  + ++ES L   S +F  VGIWG+GGIGKTTIA  +   + S F+G +F  N R 
Sbjct: 196 FGIDVRVSKVESLLNINSPDFRIVGIWGMGGIGKTTIAKVVCDKVRSRFDGIFF-GNFRQ 254

Query: 222 E--------SEKVG------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQI----DLLI 263
           +        S+ +G      GL +    F R RL R+KV IV  D+ +   +    DLL 
Sbjct: 255 QSDLQRSFLSQLLGQEILNRGLLSFRDIFVRNRLCRIKVFIVMDDVDNSMALEEWRDLLD 314

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           GR   F PGS+V+IT+RD Q+LKN     V   ++V  L+Y D++ LFS  A     P  
Sbjct: 315 GRNSSFGPGSKVLITSRDKQVLKN----VVDQTYKVVGLNYEDAIQLFSSKALKNCTPTI 370

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
              +L   + ++  G PLAL+VLGS   G S EEW SA+NKL + P   I+K L++SYDG
Sbjct: 371 DQRDLIKQIARHVQGNPLALKVLGSSFYGKSIEEWRSALNKLAQDPQ--IEKALRISYDG 428

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF--SAKIGISRLVGKSLVTISNN----- 436
           LD E+++IFLD A FF    Q      LD C +  S K  IS L+ K L+T  N      
Sbjct: 429 LDSEQKSIFLDIAHFFIIWKQDKATRILD-CVYGRSVKFDISTLIDKCLITTDNRLNSVD 487

Query: 437 ---KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-------------T 480
              ++ MHDLL+EM   IVR ES   PG+RSRL HP D  QVL EN             +
Sbjct: 488 GNERLEMHDLLEEMAFNIVRAES-DFPGERSRLCHPPDFVQVLEENKGTQKIKGISLEVS 546

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL-------- 532
            L   I+L S     + G   L    + S     + L  T +E LP+ +  L        
Sbjct: 547 MLSRHIHLKSDTFAMMDGLRFLNFDHDGSSQEYKMHLPPTGLEYLPNELRYLRWDEFPSK 606

Query: 533 --------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
                     LV+L L   S L  + + + ++ +LR ++LS    L +LP ++   ++L 
Sbjct: 607 SLPPSFRAEHLVELRLPK-SKLVRLWTGVKDVGNLRTIDLSESPYLTELP-DLSMAKNLV 664

Query: 585 YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            L L       ++PSS++ L KL ++ L  C  L+S P L
Sbjct: 665 CLRLGRCPSLTEVPSSLQYLDKLEEIDLNRCYNLRSFPML 704



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 103/221 (46%), Gaps = 55/221 (24%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           LK L L GCS + +FPEIS +IE L L  T I+E+PSSI  L+RL  LD++ CS L+S  
Sbjct: 751 LKVLDLNGCSKMTKFPEISGDIEQLRLSGT-IKEMPSSIQFLTRLEMLDMSGCSKLESFP 809

Query: 551 SRLCNLKSLR-----------------------------------------------RLN 563
                ++SLR                                                LN
Sbjct: 810 EITVPMESLRYLFLSKTGIKEIPSISFKHMTSLNTLNLDGTPLKELPSSIQFLTRLYELN 869

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM-KQLSKLSDLRLQNCKRLQSLPE 622
           LSGC KLE  PE    ++SLE LNL++   ++IPSS+ K L  L  L L     +++LPE
Sbjct: 870 LSGCSKLESFPEITVPMKSLEVLNLSKTGIKEIPSSLIKHLISLRCLNLDGTP-IKALPE 928

Query: 623 LP-CGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           LP     +  R C SL+T    +  +   S  W   +F+NC
Sbjct: 929 LPSLLRKLTTRDCASLET----TISIINFSSLWFGLDFTNC 965



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 47/193 (24%)

Query: 476 LNENTSLPTGINLDS--LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           LN   +L +   LDS  L++L +G C +L   P IS N+  L L++T+I+E+P S+    
Sbjct: 692 LNRCYNLRSFPMLDSKVLRKLSIGLCLDLTTCPTISQNMVCLRLEQTSIKEVPQSVTG-- 749

Query: 534 RLVDLDLTNCSGL-------------------KSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           +L  LDL  CS +                   K + S +  L  L  L++SGC KLE  P
Sbjct: 750 KLKVLDLNGCSKMTKFPEISGDIEQLRLSGTIKEMPSSIQFLTRLEMLDMSGCSKLESFP 809

Query: 575 EEIGNLESLEY------------------------LNLAEKDFEKIPSSMKQLSKLSDLR 610
           E    +ESL Y                        LNL     +++PSS++ L++L +L 
Sbjct: 810 EITVPMESLRYLFLSKTGIKEIPSISFKHMTSLNTLNLDGTPLKELPSSIQFLTRLYELN 869

Query: 611 LQNCKRLQSLPEL 623
           L  C +L+S PE+
Sbjct: 870 LSGCSKLESFPEI 882


>gi|298953301|gb|ADI99935.1| TIR-NBS-LRR class resistance protein [Cucumis sativus]
 gi|315507077|gb|ADU33174.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]
          Length = 939

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 237/713 (33%), Positives = 343/713 (48%), Gaps = 154/713 (21%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVFLSFRG+D R NF SHLN  L +  I  FID KL+RG EI  SL  AIEGSKISIV+ 
Sbjct: 18  DVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEICASLLEAIEGSKISIVVI 77

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----------------YC 119
           SE YASS WCLNELVKI+      GQ+V+P+FY VDPS+ G                 + 
Sbjct: 78  SESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQSGRFGEEFAKLEVRFFN 137

Query: 120 PSLGW---------MGIFDI--PTSESVLIEGNVNDISKKLS-DLFPSDNKDQLVGVESI 167
               W         M  + +     E+ LI+  V ++ KKL       D     VG++  
Sbjct: 138 KMQAWKEALITVSHMSGWPVLQRDDEANLIQNIVQEVWKKLDRATMQLDVAKYPVGIDIQ 197

Query: 168 IKEIESQLLS-GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
           ++ +   ++S G T F   G++G+GG+GKTTIA A+Y+ I+  FEG  F+ NIR+ S + 
Sbjct: 198 VRNLLPHVMSNGITMF---GLYGVGGMGKTTIAKALYNKIADEFEGCCFLSNIREASNQY 254

Query: 227 GGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
           GGL                         +   R RL   K+L++  D+   +Q+  L G 
Sbjct: 255 GGLVQFQKELLCEILMDDSIKVSNLPRGITIIRNRLYSKKILLILDDVDTREQLQALAGG 314

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F  GS+VI TTR+ QLL  H   ++ +   V  L Y+++L LFS + F  +HP   +
Sbjct: 315 HDWFGHGSKVIATTRNKQLLVTHGFDKMQN---VGGLDYDEALELFSWHCFRNSHPLNVY 371

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSE--------EEWESAVNKLKRMPHMDIQKVL 377
           LELS   + Y  G+PLAL+VLGS+L  + +        +E+E      K     DIQ  L
Sbjct: 372 LELSKRAVDYCKGLPLALEVLGSFLHSIGDPSNFKRILDEYE------KHYLDKDIQDSL 425

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-N 436
           ++SYDGL+DE                                 GI++L+  SL+TI   N
Sbjct: 426 RISYDGLEDE---------------------------------GITKLMNLSLLTIGRFN 452

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------------PT 484
           ++ MH+++Q+MG  I   E+ K   KR RL   +D   VLN N               PT
Sbjct: 453 RVEMHNIIQQMGRTIHLSETSKS-HKRKRLLIKDDAMDVLNGNKEARAVKVIKLNFPKPT 511

Query: 485 GINLDS--------LKELYLGGCS-----------------NLKRFPEISC-------NI 512
            +++DS        L  L +G  +                 N  +FP  S        N+
Sbjct: 512 KLDIDSRAFDKVKNLVVLEVGNATSSESSTLEYLPSSLRWMNWPQFPFSSLPTTYTMENL 571

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            +L L  ++I+       +  RL +++L++ + L  +   L    +L+ LNL GC  L K
Sbjct: 572 IELKLPYSSIKHFGQGYMSCERLKEINLSDSNLLVEIPD-LSTAINLKYLNLVGCENLVK 630

Query: 573 LPEEIGNLESLEYLNLAE--KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           + E IG+L  L  L+ +   K FE+ PS +K L  L  L ++NC+  +  P+ 
Sbjct: 631 VHESIGSLSKLVALHFSSSVKGFEQFPSCLK-LKSLKFLSMKNCRIDEWCPQF 682



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 26/151 (17%)

Query: 475 VLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR 534
           +L E   L T INL   K L L GC NL +  E                    SIG+LS+
Sbjct: 604 LLVEIPDLSTAINL---KYLNLVGCENLVKVHE--------------------SIGSLSK 640

Query: 535 LVDLDLTN-CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
           LV L  ++   G +   S L  LKSL+ L++  C   E  P+    ++S+EYL++     
Sbjct: 641 LVALHFSSSVKGFEQFPSCL-KLKSLKFLSMKNCRIDEWCPQFSEEMKSIEYLSIGYSTV 699

Query: 594 E-KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             ++  ++  L+ L  L L  CK L +LP++
Sbjct: 700 TYQLSPTIGYLTSLKHLSLYYCKELTTLPKI 730


>gi|13509215|emb|CAC35327.1| N1-A protein [Linum usitatissimum]
          Length = 1008

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 227/750 (30%), Positives = 359/750 (47%), Gaps = 120/750 (16%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGS 69
           +P  +++VFLSFRG DVR  F  HL  +L R KI TF D++ L +G  I PSL  AI  S
Sbjct: 25  LPSGEYEVFLSFRGPDVRQTFADHLYTSLVRSKIRTFRDEEGLQKGETIGPSLIQAITES 84

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQ-----IVVPVFYLVDPSDAGYCPS--- 121
           KI I I ++ YASS+WCL EL K++      G+     I++PVFY +DP D  +  S   
Sbjct: 85  KIYIPILTQNYASSKWCLQELAKMVNCWKNGGEAKGQHIIIPVFYFMDPRDVRHPDSGPY 144

Query: 122 ----------------LGWMGI-----------FDIPTSESVLIEGNVNDISKKLSDLFP 154
                           L W G                T +  +++    D+   L   + 
Sbjct: 145 KESFEQHNLKHDPETILEWKGAPQEVGKMKGWHISELTGQGAVVDKIFTDVELHLRANY- 203

Query: 155 SDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
           +   D+LVG++  ++E+   L   ST    +GI+G+GG+GKTT+A A+Y+ +S  FE   
Sbjct: 204 TLATDELVGIDFSVEEVVKLLNLDSTSEKIIGIYGMGGLGKTTLAKAVYNKVSMQFERCC 263

Query: 215 FMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDL 253
           F+ NIR+   K  G+  +                      +   R R+SR K+ +V  D+
Sbjct: 264 FLNNIREALLKNDGVVALQNKVISDILRKDFGQAKNASDGVQMIRERVSRHKIFVVLDDV 323

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            +  + D + G+L  F   SR ++TTRD + L+  RG ++   F+ + +S++ SL LFS+
Sbjct: 324 NESFRFDDIFGKLTAFSADSRFLVTTRDARTLERLRGCKL---FKHEGMSHDHSLKLFSK 380

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AFG ++P   +  L    ++  +G+PLAL+V+GS L    +  WE  + +LK +P +++
Sbjct: 381 HAFGVDYPPEDYASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWEDKLIELKAIPAVEV 440

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           Q  LK+SY+ L D E+ IFLD ACFF G  + + M     C F     I  LV +SLV I
Sbjct: 441 QDRLKISYNELTDNEKQIFLDVACFFVGAKKEIPMYMWSDCGFYPTTTIRTLVQRSLVRI 500

Query: 434 SNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLDS 490
           ++N +  MHD ++++G  IVR+ES ++P KRSR+W   D   +L   E       + +D 
Sbjct: 501 NDNEEFWMHDHIRDLGRAIVREES-QNPYKRSRIWSNNDAIDILKNREGNDCVEALRVDM 559

Query: 491 LKELYLGGCSNLKRFP----------EISCNIED-------------------LDLKETA 521
             E +       K+F           ++S N ++                   L+L +  
Sbjct: 560 RGEGFALTDEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWLRVYHGDPRPSGLNLNKLM 619

Query: 522 IEELPSS-----------IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           I EL  S           I    +L  + L  C GL+ V   L   + L  L  S C ++
Sbjct: 620 ILELEVSDVTDSWEGWNEIKAAGKLKVVHLMCCKGLEKVPD-LSTCRGLELLRFSICRRM 678

Query: 571 EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG---- 626
                +IGN + L+ L++ +     +   ++ L  L  L + +      L E+P G    
Sbjct: 679 HG-ELDIGNFKDLKVLDIFQTRITALKGQVESLQNLQQLDVGS----SGLIEVPAGISKL 733

Query: 627 SSIHARHCTSLK-----TLSNSSTLLTRSS 651
           SS+   + T++K     TL N   +L  SS
Sbjct: 734 SSLEYLNLTNIKHDKVETLPNGLKILLISS 763


>gi|334183770|ref|NP_564971.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196827|gb|AEE34948.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1400

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 238/733 (32%), Positives = 365/733 (49%), Gaps = 134/733 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG DVR NF+SH+     R+ I  FID+++ RG  I P L  AI  SKI+IV+
Sbjct: 80  HHVFPSFRGDDVRRNFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIKAIRESKIAIVL 139

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------YCPS-- 121
            S  YASS+WCL ELV+I++ K ++G  V  +FY VDPS                C    
Sbjct: 140 LSRNYASSKWCLEELVEIMKCKKEFGLTVFAIFYEVDPSHVKKLTGEFGAVFQKTCKGRT 199

Query: 122 ----LGWMGIFD-IPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W   F+ + T          +E+ +IE    +ISK+L +  P    + L+G+++
Sbjct: 200 KENIMRWRQAFEEVATIAGYDSRNWENEAAMIEEIAIEISKRLINSSPFSGFEGLIGMKA 259

Query: 167 IIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
            I++++  L   ST E  TVGI G  GIGK+TIA  +++ IS  F+ S FM+     +  
Sbjct: 260 HIEKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVFMKFKPSYTRP 319

Query: 226 V-GGLANIHLNFERRRLSRM---------------------KVLIVFYDLTDLKQIDLLI 263
           +     ++ L  E++ L+++                     KVLIV   +  L Q+ L +
Sbjct: 320 ICSDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFVMGKKVLIVLDGVDQLVQL-LAM 378

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
            +     PGSR+IITT+D QLLK     ++ H++ V     +++L +F  +AFG + P  
Sbjct: 379 PKAVCLGPGSRIIITTQDQQLLK---AFQIKHIYNVDFPPDHEALQIFCIHAFGHDSPDD 435

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF +L+  V + A  +PL L+V+GS+ +GMS+E+W+  + +L+     +I  +LK SYD 
Sbjct: 436 GFEKLATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSILKFSYDV 495

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACR--FS-AKIGISRLVGKSLVTISNNKITM 440
           LDDE++++FL  ACFF  ND+ +   F D  R  FS  + G+  LV +SL++    +  M
Sbjct: 496 LDDEDKDLFLHIACFF--NDEGIDHTFEDTLRHKFSNVQRGLQVLVQRSLISEDLTQ-PM 552

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD---SLKELY 495
           H+LL ++G EIVR +S+ +PGKR  L   ++I +VL  +T   +  GIN +   S+ EL 
Sbjct: 553 HNLLVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDELN 612

Query: 496 LG-----GCSNLK--RFPEISCN------------------------------------I 512
           +      G SNL+  RF E S                                      +
Sbjct: 613 ISDRVFEGMSNLQFFRFDENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFNLKFL 672

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDL-----------------------TNCSGLKSV 549
             + LK + +E+L   I  L  L  +DL                       ++CS L  +
Sbjct: 673 VKIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSSLIEL 732

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSD 608
            S + N  +++ L++ GC  L KLP  IGNL +L  L+L       ++PSS+  L  L  
Sbjct: 733 PSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPR 792

Query: 609 LRLQNCKRLQSLP 621
           L L  C  L  LP
Sbjct: 793 LDLMGCSSLVELP 805



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 6/168 (3%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
            LP  I NL +LK L L GCS+L   P    + N++ LDL   +++ ELPSSIGNL  L  
Sbjct: 1068 LPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVELPSSIGNLINLKK 1127

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
            LDL+ CS L  +   + NL +L+ L LS C  L +LP  IGNL +L+ L L+E     ++
Sbjct: 1128 LDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVEL 1187

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH-ARHCTSLKTLSNS 643
            PSS+  L  L  L L  C +L SLP+LP   S+  A  C SL+TL+ S
Sbjct: 1188 PSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACS 1235



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 90/146 (61%), Gaps = 6/146 (4%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKE-TAIEELPSSIGNLSRLV 536
            LP  I NL +L+ELYL  CS+L   P       N++ L+L E +++ ELPSSIGNL  L 
Sbjct: 900  LPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQ 959

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
            +L L+ CS L  + S + NL +L++L+LSGC  L +LP  IGNL +L+ LNL+E     +
Sbjct: 960  ELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVE 1019

Query: 596  IPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +PSS+  L  L +L L  C  L  LP
Sbjct: 1020 LPSSIGNLINLQELYLSECSSLVELP 1045



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 97/173 (56%), Gaps = 13/173 (7%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKE-TAIEELPSSIGNLSRLV 536
            LP  I NL +LK L L  CS+L   P       N+++L L E +++ ELPSSIGNL  L 
Sbjct: 996  LPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLK 1055

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
             LDL+ CS L  +   + NL +L+ LNLSGC  L +LP  IGNL +L+ L+L+      +
Sbjct: 1056 KLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNL-NLKKLDLSGCSSLVE 1114

Query: 596  IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR-----HCTSLKTLSNS 643
            +PSS+  L  L  L L  C  L  LP L  G+ I+ +      C+SL  L +S
Sbjct: 1115 LPSSIGNLINLKKLDLSGCSSLVELP-LSIGNLINLQELYLSECSSLVELPSS 1166



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 95/172 (55%), Gaps = 10/172 (5%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDL----KETAIEELPSSIGNLSRLV 536
           LP+ I NL +L+  Y  GCS+L   P    N+  L +    + +++ E+PSSIGNL  L 
Sbjct: 804 LPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISSLVEIPSSIGNLINLK 863

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
            L+L+ CS L  + S + NL +L++L+LSGC  L +LP  IGNL +L+ L L+E     +
Sbjct: 864 LLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVE 923

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNS 643
           +PSS+  L  L  L L  C  L  LP     L     ++   C+SL  L +S
Sbjct: 924 LPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSS 975



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 4/138 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK + L   S+LK  P +S  I  L++     +++ ELPSSIGN + +  LD+  CS
Sbjct: 692 LVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSSLIELPSSIGNATNIKSLDIQGCS 751

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
            L  + S + NL +L RL+L GC  L +LP  IGNL +L  L+L       ++PSS+  L
Sbjct: 752 SLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNL 811

Query: 604 SKLSDLRLQNCKRLQSLP 621
             L       C  L  LP
Sbjct: 812 INLEAFYFHGCSSLLELP 829


>gi|12597786|gb|AAG60098.1|AC073178_9 disease resistance protein, putative [Arabidopsis thaliana]
          Length = 1398

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 238/733 (32%), Positives = 365/733 (49%), Gaps = 134/733 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG DVR NF+SH+     R+ I  FID+++ RG  I P L  AI  SKI+IV+
Sbjct: 78  HHVFPSFRGDDVRRNFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIKAIRESKIAIVL 137

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------YCPS-- 121
            S  YASS+WCL ELV+I++ K ++G  V  +FY VDPS                C    
Sbjct: 138 LSRNYASSKWCLEELVEIMKCKKEFGLTVFAIFYEVDPSHVKKLTGEFGAVFQKTCKGRT 197

Query: 122 ----LGWMGIFD-IPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W   F+ + T          +E+ +IE    +ISK+L +  P    + L+G+++
Sbjct: 198 KENIMRWRQAFEEVATIAGYDSRNWENEAAMIEEIAIEISKRLINSSPFSGFEGLIGMKA 257

Query: 167 IIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
            I++++  L   ST E  TVGI G  GIGK+TIA  +++ IS  F+ S FM+     +  
Sbjct: 258 HIEKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVFMKFKPSYTRP 317

Query: 226 V-GGLANIHLNFERRRLSRM---------------------KVLIVFYDLTDLKQIDLLI 263
           +     ++ L  E++ L+++                     KVLIV   +  L Q+ L +
Sbjct: 318 ICSDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFVMGKKVLIVLDGVDQLVQL-LAM 376

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
            +     PGSR+IITT+D QLLK     ++ H++ V     +++L +F  +AFG + P  
Sbjct: 377 PKAVCLGPGSRIIITTQDQQLLK---AFQIKHIYNVDFPPDHEALQIFCIHAFGHDSPDD 433

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF +L+  V + A  +PL L+V+GS+ +GMS+E+W+  + +L+     +I  +LK SYD 
Sbjct: 434 GFEKLATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSILKFSYDV 493

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACR--FS-AKIGISRLVGKSLVTISNNKITM 440
           LDDE++++FL  ACFF  ND+ +   F D  R  FS  + G+  LV +SL++    +  M
Sbjct: 494 LDDEDKDLFLHIACFF--NDEGIDHTFEDTLRHKFSNVQRGLQVLVQRSLISEDLTQ-PM 550

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD---SLKELY 495
           H+LL ++G EIVR +S+ +PGKR  L   ++I +VL  +T   +  GIN +   S+ EL 
Sbjct: 551 HNLLVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDELN 610

Query: 496 LG-----GCSNLK--RFPEISCN------------------------------------I 512
           +      G SNL+  RF E S                                      +
Sbjct: 611 ISDRVFEGMSNLQFFRFDENSYGRLHLPQGLNYLPPKLRILHWDYYPMTSLPSKFNLKFL 670

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDL-----------------------TNCSGLKSV 549
             + LK + +E+L   I  L  L  +DL                       ++CS L  +
Sbjct: 671 VKIILKHSELEKLWEGIQPLVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSSLIEL 730

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSD 608
            S + N  +++ L++ GC  L KLP  IGNL +L  L+L       ++PSS+  L  L  
Sbjct: 731 PSSIGNATNIKSLDIQGCSSLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPR 790

Query: 609 LRLQNCKRLQSLP 621
           L L  C  L  LP
Sbjct: 791 LDLMGCSSLVELP 803



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 6/168 (3%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
            LP  I NL +LK L L GCS+L   P    + N++ LDL   +++ ELPSSIGNL  L  
Sbjct: 1066 LPLSIGNLINLKTLNLSGCSSLVELPSSIGNLNLKKLDLSGCSSLVELPSSIGNLINLKK 1125

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
            LDL+ CS L  +   + NL +L+ L LS C  L +LP  IGNL +L+ L L+E     ++
Sbjct: 1126 LDLSGCSSLVELPLSIGNLINLQELYLSECSSLVELPSSIGNLINLQELYLSECSSLVEL 1185

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH-ARHCTSLKTLSNS 643
            PSS+  L  L  L L  C +L SLP+LP   S+  A  C SL+TL+ S
Sbjct: 1186 PSSIGNLINLKKLDLNKCTKLVSLPQLPDSLSVLVAESCESLETLACS 1233



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/146 (44%), Positives = 90/146 (61%), Gaps = 6/146 (4%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKE-TAIEELPSSIGNLSRLV 536
            LP  I NL +L+ELYL  CS+L   P       N++ L+L E +++ ELPSSIGNL  L 
Sbjct: 898  LPLSIGNLINLQELYLSECSSLVELPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQ 957

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
            +L L+ CS L  + S + NL +L++L+LSGC  L +LP  IGNL +L+ LNL+E     +
Sbjct: 958  ELYLSECSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVE 1017

Query: 596  IPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +PSS+  L  L +L L  C  L  LP
Sbjct: 1018 LPSSIGNLINLQELYLSECSSLVELP 1043



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 97/173 (56%), Gaps = 13/173 (7%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKE-TAIEELPSSIGNLSRLV 536
            LP  I NL +LK L L  CS+L   P       N+++L L E +++ ELPSSIGNL  L 
Sbjct: 994  LPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSSIGNLINLK 1053

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
             LDL+ CS L  +   + NL +L+ LNLSGC  L +LP  IGNL +L+ L+L+      +
Sbjct: 1054 KLDLSGCSSLVELPLSIGNLINLKTLNLSGCSSLVELPSSIGNL-NLKKLDLSGCSSLVE 1112

Query: 596  IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR-----HCTSLKTLSNS 643
            +PSS+  L  L  L L  C  L  LP L  G+ I+ +      C+SL  L +S
Sbjct: 1113 LPSSIGNLINLKKLDLSGCSSLVELP-LSIGNLINLQELYLSECSSLVELPSS 1164



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 95/172 (55%), Gaps = 10/172 (5%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDL----KETAIEELPSSIGNLSRLV 536
           LP+ I NL +L+  Y  GCS+L   P    N+  L +    + +++ E+PSSIGNL  L 
Sbjct: 802 LPSSIGNLINLEAFYFHGCSSLLELPSSIGNLISLKILYLKRISSLVEIPSSIGNLINLK 861

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
            L+L+ CS L  + S + NL +L++L+LSGC  L +LP  IGNL +L+ L L+E     +
Sbjct: 862 LLNLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVELPLSIGNLINLQELYLSECSSLVE 921

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNS 643
           +PSS+  L  L  L L  C  L  LP     L     ++   C+SL  L +S
Sbjct: 922 LPSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQELYLSECSSLVELPSS 973



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 4/138 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK + L   S+LK  P +S  I  L++     +++ ELPSSIGN + +  LD+  CS
Sbjct: 690 LVNLKVMDLRYSSHLKELPNLSTAINLLEMVLSDCSSLIELPSSIGNATNIKSLDIQGCS 749

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
            L  + S + NL +L RL+L GC  L +LP  IGNL +L  L+L       ++PSS+  L
Sbjct: 750 SLLKLPSSIGNLITLPRLDLMGCSSLVELPSSIGNLINLPRLDLMGCSSLVELPSSIGNL 809

Query: 604 SKLSDLRLQNCKRLQSLP 621
             L       C  L  LP
Sbjct: 810 INLEAFYFHGCSSLLELP 827


>gi|297805564|ref|XP_002870666.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316502|gb|EFH46925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1104

 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 231/713 (32%), Positives = 356/713 (49%), Gaps = 100/713 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA SSSS   +   ++ VF SF G DVR+ F+SHL+     + I TF D ++ RG+ I P
Sbjct: 1   MAPSSSS--SLDFKRYHVFSSFHGPDVRNGFLSHLHNHFESKGITTFNDQEIERGHTIGP 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L  AI  S++SIV+ SE YASS WCL+ELV+IL+ K   GQ V+ +FY VDPSD     
Sbjct: 59  ELVQAIRESRVSIVVLSEKYASSGWCLDELVEILKCKEASGQAVLTIFYKVDPSDVRKQR 118

Query: 117 ------------GYCPSLG--WM-GIFDIPT----------SESVLIEGNVNDISKKLSD 151
                       G    +   W+  + D+ T          +E+ +I+    D+S KL +
Sbjct: 119 GDFGNTFKKTCEGKTEEVKQRWIKALTDVATIAGEHSLNWANEAEMIQKIATDVSNKL-N 177

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + PS + + +VG+E+ + +++S L     +   +GIWG  GIGKTTIA A+++ +S+ F 
Sbjct: 178 VTPSRDFEGMVGLEAHLTKLDSLLCLECNDVKMIGIWGPAGIGKTTIARALFNQLSTGFR 237

Query: 212 GSYFMQNI----RDESEKVGG--LANI---------HLNFERRRLSRMKVLIVFYDLTDL 256
            S FM NI     D   ++    L+ I         HL   +  L   +VLIV  D+ DL
Sbjct: 238 HSCFMGNIDVNNYDSKLRLHNMLLSKILNQKDMKIHHLGAIKEWLHNQRVLIVLDDVDDL 297

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q+++L      F P SR+I+T +D ++LK H    +  ++ V   S  ++L +F  +AF
Sbjct: 298 EQLEVLAKESFWFGPRSRIIVTLKDKKILKAHG---INDIYHVDYPSKKEALEIFCLSAF 354

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
            Q+ P  GF E +  V++    +PLAL V+GS   G SE+EW   +  ++      ++ V
Sbjct: 355 KQSSPQDGFEEFARKVVELCGNLPLALCVVGSSFYGESEDEWRLQLYGIEINLDRKVEDV 414

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           L+V YD L ++ Q++FL  ACFF       V   L       + G+  L  KSLV IS +
Sbjct: 415 LRVGYDKLLEKHQSLFLHIACFFNHESVDYVSTMLADSTLDVENGLKNLAAKSLVHISTH 474

Query: 437 -KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLK- 492
            +I MH LLQ++G  +V Q+S  + GKR  L   ++I  VL   T   +  GI+ D  K 
Sbjct: 475 GRIRMHCLLQQLGRHVVVQQS-GEQGKRQFLVEAKEIRDVLANKTGTGSVIGISFDMSKI 533

Query: 493 -------------------ELYLGGCS---NLKRFPEI-------------------SCN 511
                              + Y G  S   ++K  P +                    C 
Sbjct: 534 GEFSISKRAFERMCNLKFLKFYNGNVSLLEDMKYLPRLRLLHWDSYPRKSLPLTFQPECL 593

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           +E L ++ + +E L   I  L+ L  +DL     LK + + L    +L  L L GC  L 
Sbjct: 594 VE-LHMRYSKLEMLWGGIQPLANLKKIDLGYSFNLKEIPN-LSKATNLETLKLIGCESLV 651

Query: 572 KLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            LP  I NL  LE L+ +     + IP+++  L+ L ++++ NC RL+S P++
Sbjct: 652 VLPSSIRNLHKLEMLDASGCSKLQVIPTNI-DLASLEEVKMDNCSRLRSFPDI 703



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 30/164 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLDL 540
           +PT I+L SL+E+ +  CS L+ FP+IS NIE L +  T I+E P+SI G  SRL  L +
Sbjct: 677 IPTNIDLASLEEVKMDNCSRLRSFPDISRNIEYLSVAGTKIKEFPASIVGYWSRLDILQI 736

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +              +SL+RL          +P      +S++ L+L+  D + IP  +
Sbjct: 737 GS--------------RSLKRLT--------HVP------QSVKSLDLSNSDIKMIPDYV 768

Query: 601 KQLSKLSDLRLQNCKRLQSLP-ELPCGSSIHARHCTSLKTLSNS 643
             L  L  L + NC++L S+    P  +S+ A HC SLK++  S
Sbjct: 769 IGLPHLGYLNVDNCRKLVSIQGHFPSLASLSAEHCISLKSVCCS 812


>gi|451798980|gb|AGF69188.1| TMV resistance protein N-like protein 2 [Vitis labrusca]
          Length = 1386

 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 252/753 (33%), Positives = 369/753 (49%), Gaps = 156/753 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE       
Sbjct: 20  YDVFLSFRGSDTRRNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLFRAIE------- 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
                   SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 73  -------ESRWCLNELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 125

Query: 125 -------MGIFDIPTSESVLIEG-NVND-----ISKKLSDLF-------PSDNKDQLVGV 164
                  +  + I   E+  + G +VND     + K++ D         P      +VG+
Sbjct: 126 NQEKMEMIQKWRIALREAANLSGCHVNDQYETQVVKEIVDTIIRRLNHHPLSVGRNIVGI 185

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES- 223
              +++++S + +     + VGI+GIGG+GKTTIA AIY+  S  ++G  F++NIR+ S 
Sbjct: 186 GVHLEKLKSLMNTKLNMVSVVGIYGIGGVGKTTIAKAIYNETSDQYDGRSFLRNIRERSK 245

Query: 224 --------EKVGGL---ANIHLN-------FERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
                   E + G+    N  +N         +R L+  +VL++F D+ +LKQ++ L   
Sbjct: 246 GDILQLQQELLHGILRGKNFKINNVDEGISMIKRCLTSNRVLVIFDDVDELKQLEYLAEE 305

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F   S +IITTRD  +L  + G+ +   +EV +L+  ++  LFS  AF QN P   +
Sbjct: 306 KDWFHAKSTIIITTRDKHVLAQY-GADIP--YEVSKLNKEEATELFSLWAFKQNRPQEVY 362

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             LS  +I YANG+PLAL+V+G+ L G     WESA+ KLK +PH +I  VL++S+DGLD
Sbjct: 363 KNLSYNIIDYANGLPLALKVIGASLFGKKISHWESALCKLKIIPHKEIHNVLRISFDGLD 422

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D ++ +FLD ACFFKG+D+  V   L      A+  I+ L  + L+TIS N + MHDL+Q
Sbjct: 423 DIDKGMFLDVACFFKGDDKDFVSRILGP---HAEHVITTLADRCLITISKNMLDMHDLIQ 479

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD----SLKELYLGGC 499
            MG E++RQE  +DPG+RSRLW   + Y VL  N  T    G+ LD    +L +L     
Sbjct: 480 LMGWEVIRQECPEDPGRRSRLW-DSNAYHVLIGNTGTRAIEGLFLDRCKFNLSQLTTKSF 538

Query: 500 SNLKRF-------PEISCNIED---------------LDLKETAIEELP----------- 526
             + R        P     +ED               L      +E LP           
Sbjct: 539 KEMNRLRLLKIHNPRRKLFLEDHLPRDFEFSSYELTYLHWDRYPLESLPLNFHAKNLVEL 598

Query: 527 ----SSIGNLSR-------LVDLDLTNCSGLKSVS--SRLCNLK--SLRRLNLSGCLKLE 571
               S+I  L R       L  +DL+    L  +   S + NL+  +L    + GC+ LE
Sbjct: 599 LLRNSNIKQLWRGNKLHDKLRVIDLSYSVHLIRIPDFSSVPNLEILTLEGCTMHGCVNLE 658

Query: 572 KLPEEI------------------------GNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           +LP  I                        GN+  L  L+L+      +PSS+  L+ L 
Sbjct: 659 RLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQ 718

Query: 608 DLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            L LQ C +L  +P       IH  H +SL+ L
Sbjct: 719 TLLLQECAKLHKIP-------IHICHLSSLEVL 744



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP GI     L+ L   GCS L+RFPEI  N+ +L   DL  TAI +LPSSI +L+ L  
Sbjct: 660 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQT 719

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKI 596
           L L  C+ L  +   +C+L SL  L+L  C  +E  +P +I +L SL+ LNL    F  I
Sbjct: 720 LLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSI 779

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P+++ QLS+L  L L +C  L+ +PELP
Sbjct: 780 PTTINQLSRLEVLNLSHCSNLEQIPELP 807



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 112/259 (43%), Gaps = 69/259 (26%)

Query: 441  HDLLQEMGGEIVR--QESIKDPGKRSRLWHPEDIYQV-LNEN---------------TSL 482
            H L  +  G  VR   E   D  +R R +   D+ +V + EN               TSL
Sbjct: 1060 HPLTTQTKGADVRICNECQCDGARRKRCFGCSDMTEVPIIENPLELDRLCLLGCKNLTSL 1119

Query: 483  PTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            P+GI N  SL  L   GCS L+ FP+I  ++E   +L L  TAI+E+PSSI  L  L   
Sbjct: 1120 PSGICNFKSLATLCCSGCSQLESFPDILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHF 1179

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE----------------- 581
             LTNC  L ++   +CNL SLR+L +  C    KLP+ +G L+                 
Sbjct: 1180 TLTNCINLVNLPDSICNLTSLRKLRVERCPNFRKLPDNLGRLQSLLQLSVGHLDSMNFQL 1239

Query: 582  ------------------------------SLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
                                          SLE L LA   F +IP  + QL  L+ L L
Sbjct: 1240 PSLSGLCSLRTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTFLDL 1299

Query: 612  QNCKRLQSLPELPCGSSIH 630
             +CK LQ +PELP G   H
Sbjct: 1300 SHCKMLQHIPELPSGVRRH 1318



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 14/152 (9%)

Query: 516  DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            D+ E  I E P  +  L       L  C  L S+ S +CN KSL  L  SGC +LE  P+
Sbjct: 1092 DMTEVPIIENPLELDRLC------LLGCKNLTSLPSGICNFKSLATLCCSGCSQLESFPD 1145

Query: 576  EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHA 631
             + ++ESL  L L     ++IPSS+++L  L    L NC  L +LP+  C       +  
Sbjct: 1146 ILQDMESLRNLYLDGTAIKEIPSSIERLRGLQHFTLTNCINLVNLPDSICNLTSLRKLRV 1205

Query: 632  RHCTSLKTLSNS----STLLTRSSKHWDIFNF 659
              C + + L ++     +LL  S  H D  NF
Sbjct: 1206 ERCPNFRKLPDNLGRLQSLLQLSVGHLDSMNF 1237


>gi|15230461|ref|NP_190049.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|30692207|ref|NP_850654.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6967111|emb|CAB72465.1| disease resistance protein homolog [Arabidopsis thaliana]
 gi|28973753|gb|AAO64192.1| putative disease resistance protein homolog [Arabidopsis thaliana]
 gi|332644404|gb|AEE77925.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644405|gb|AEE77926.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1214

 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 252/789 (31%), Positives = 374/789 (47%), Gaps = 151/789 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 93  KHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 152

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---------AGYCPSLG-- 123
           + S  YASS WCL+EL +I++ +   GQIV+ +FY V+P+D           +  +    
Sbjct: 153 LLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGK 212

Query: 124 -------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 213 PKEQVERWRKALEDVATIAGYHSHSWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMR 272

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  + + +S  F+ S  M NI+     
Sbjct: 273 AHMDMLEQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPR 332

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 333 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 392

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++V+  S +++  +F  NAFGQ  P  
Sbjct: 393 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVEYPSNDEAFQIFCMNAFGQKQPHE 449

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V   A  +PL L+VLGS L+G S+ EWE  + +L+      I  +++ SYD 
Sbjct: 450 GFDEIAWEVKALAGKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIGGIIQFSYDA 509

Query: 384 LDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTI------ 433
           L DE++ +FL  AC F G      + L+  FLD      + G+  L  KSL++       
Sbjct: 510 LCDEDKYLFLYIACLFNGESTTKVKELLGKFLD-----VRQGLHVLAQKSLISFDEEISW 564

Query: 434 ------------------SNNK---ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-D 471
                               NK   I MH LL++ G E  R++ +     + +L   E D
Sbjct: 565 KQIVQVLLLNKFSHVRHTKRNKSQIIRMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERD 624

Query: 472 IYQVLNENTS---LPTGINLDSLK---ELYLGGCSNLKRF---------------PE-IS 509
           I +VL+++T+      GINLD  K   EL +     L+R                PE + 
Sbjct: 625 ICEVLDDDTTDNRRFIGINLDLYKNEEELNISE-KALERIHDFQFVKINYVFTHQPERVQ 683

Query: 510 CNIEDLDLKETAIEE----------LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
             +EDL      I            LPS+  N   LV+LD+  CS L+ +      L++L
Sbjct: 684 LALEDLIYHSPRIRSLKWFPYQNICLPSTF-NPEFLVELDM-RCSKLRKLWEGTKQLRNL 741

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           + ++LS    L++LP  I  L SL+ L+L +     K+P S+   + L  L L NC R+ 
Sbjct: 742 KWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINA-NNLQGLSLTNCSRVV 800

Query: 619 SLPELPCGSSIHA---RHCTSLKTLSNS---------------STLLTRSSKHWDI---- 656
            LP +   +++H    ++C+SL  L  S               S+L+   S   D+    
Sbjct: 801 KLPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLK 860

Query: 657 -FNFSNCSN 664
            F+ SNCSN
Sbjct: 861 EFDLSNCSN 869



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 85/161 (52%), Gaps = 28/161 (17%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LPT INL SL+ L L  CS LK FPEIS +I +L LK TAI+E+P SI + SRL   ++
Sbjct: 896  TLPTNINLISLRILDLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSITSWSRLAVYEM 955

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +                             E L E    L+ +  L L  +D +++P  +
Sbjct: 956  S---------------------------YFESLKEFPHALDIITDLLLVSEDIQEVPPWV 988

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            K++S+L  LRL NC  L SLP+LP     I+A +C SL+ L
Sbjct: 989  KRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERL 1029



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDL 538
           LP  IN ++L+ L L  CS + + P I    N+  L L+  +++ ELP SIG  + L  L
Sbjct: 779 LPPSINANNLQGLSLTNCSRVVKLPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKL 838

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIP 597
           D+  CS L  + S + ++ +L+  +LS C  L +LP  IGNL+ L  L +      E +P
Sbjct: 839 DIRGCSSLVKLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLP 898

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +++  +S L  L L +C +L+S PE+
Sbjct: 899 TNINLIS-LRILDLTDCSQLKSFPEI 923



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 7/135 (5%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP   N+ +L +L L  CS+L   P     + N+  LD++  +++ +LPSSIG+++ L +
Sbjct: 802 LPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLKE 861

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            DL+NCS L  + S + NL+ L  L + GC KLE LP  I NL SL  L+L   D  ++ 
Sbjct: 862 FDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNI-NLISLRILDLT--DCSQLK 918

Query: 598 SSMKQLSKLSDLRLQ 612
           S  +  + +S+LRL+
Sbjct: 919 SFPEISTHISELRLK 933


>gi|449443189|ref|XP_004139363.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 967

 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 238/691 (34%), Positives = 365/691 (52%), Gaps = 99/691 (14%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
           SSSS   +P    DVFLSFRG+D R NF SHL+ ALC++ I  FIDD KL RG EI  SL
Sbjct: 7   SSSSHLRLPF---DVFLSFRGEDTRSNFTSHLHMALCQKGINVFIDDDKLPRGEEICTSL 63

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDA----- 116
             AIE SKISIVI SE YASS WCL+EL+KI+  +K+   Q+V PVFY V+PS       
Sbjct: 64  LKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVNPSHVRRQRG 123

Query: 117 ------------------GYCPSLGW---MGIFDIPT--SESVLIEGNVNDISKKLSDLF 153
                              +  +L +   M  +D+    +E+ LI+  V ++ KKL +  
Sbjct: 124 VFGEEFAKLQVRFSNKMQAWSEALTFISTMSGWDLKNYENEASLIQIIVQEVRKKLRNSA 183

Query: 154 PS--DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            +  D     VG++  +  +   ++S   E   VG++GIGG+GKTT+A A+Y+ I+  FE
Sbjct: 184 TTELDVAKYPVGIDIQVSNLLPHVMS--NEITMVGLYGIGGMGKTTLAKALYNKIADEFE 241

Query: 212 GSYFMQNIRDESEKVGGLAN---------------------IHLNFERRRLSRMKVLIVF 250
           G  F+ N+R+ S +  GL                       I ++  R RL   K++++ 
Sbjct: 242 GCCFLSNVREASNQYWGLVELQKTLLREILMDDSIKVSNVGIGISIIRDRLCSKKIILIL 301

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+   +Q+  L G    F  GS+VI TTR+ QLL +H G  +  +  V  L+  + L L
Sbjct: 302 DDVDTHEQLQALAGGHHWFGHGSKVIATTRNKQLLASH-GFNI--LKRVNGLNAIEGLEL 358

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMP 369
           FS +AF   HP++ +L++S   + Y  G+PLAL+VLGS+L  + ++ ++E  +++ +   
Sbjct: 359 FSWHAFNNCHPSSDYLDVSKRAVHYCKGLPLALEVLGSFLNSIDDQSKFERILDEYEN-S 417

Query: 370 HMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC--RFSAKIGISRL 425
           ++D  IQ +L++SYD L+ + ++IFL  +C F   D+  V   L  C  RF  ++GI +L
Sbjct: 418 YLDKGIQDILRISYDELEQDVKDIFLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKL 477

Query: 426 VGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE------ 478
              SL+TI   N++ MHDL+Q+MG  I   E+  +  KR RL   +D+  VLN       
Sbjct: 478 TDLSLLTIDKFNRVEMHDLIQQMGHTIHLLET-SNSHKRKRLLFEKDVMDVLNGDMEARA 536

Query: 479 ------NTSLPTGINLDS--------LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE 524
                 N   PT +++DS        L  L +   ++ K    +  ++  +   +     
Sbjct: 537 VKVIKLNFHQPTELDIDSRGFEKVKNLVVLKVHNVTSSKSLEYLPSSLRWMIWPKFPFSS 596

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES-- 582
           LPS+  +L +L +L + + S +K   +   N K L+R+NL+      K  EEI +L S  
Sbjct: 597 LPSTY-SLEKLTELSMPS-SFIKHFGNGYLNCKWLKRINLN----YSKFLEEISDLSSAI 650

Query: 583 -LEYLNLAE-KDFEKIPSSMKQLSKLSDLRL 611
            LE LNL+E K   ++  S+  L KL+ L L
Sbjct: 651 NLEELNLSECKKLVRVHESVGSLGKLAKLEL 681


>gi|332330347|gb|AEE43933.1| TIR-NBS-LRR resistance protein muRdr1I [Rosa multiflora]
          Length = 628

 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 192/520 (36%), Positives = 281/520 (54%), Gaps = 58/520 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F  +L   L R  I TF DD +L RG  ISP L +AI+ S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTDYLYHELRRRGIRTFRDDPQLERGTAISPELLTAIKQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YA+S+WCL EL KI++   + G I+ P+FY VD  D                  
Sbjct: 78  VVLSPNYATSKWCLLELSKIIKCMKERGTIM-PIFYEVDTDDVKHQRGSFAKAFQEHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDLFPS----DNKDQL 161
                    G+  +L  +  F   TS+    E   + +I + L S + P      + ++L
Sbjct: 137 FGVGNKKVEGWRDALTKVASFAGWTSKDYRYETELIREIVQVLWSKVHPCLTVFGSSEKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+++ +++I+  L   + +   +GIWG+GG+GKTT+A  +Y  IS  FE   F+ N+R+
Sbjct: 197 VGMDTKLEDIDVLLDKETKDVRFIGIWGMGGLGKTTLARLVYEKISHLFEVCVFLANVRE 256

Query: 222 ESEKVGGL-------------ANIH-------LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            S   G +              NI        +   +R      VL+V  D    +Q++ 
Sbjct: 257 VSATHGLVYLQKQILSQIWKEENIQVWDVYSGITMTKRCFCNKAVLLVLDDADQSEQLEN 316

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G  D F   SR+IITTR+  +L  H    +   +E+K L+ +++L LFS  AF    P
Sbjct: 317 LVGEKDWFGLRSRIIITTRNRHVLVTHG---IEKPYELKGLNEDEALQLFSWKAFRNYEP 373

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              ++E S   + YA G+P+AL+ LGS+L   S + W  A+ KL+  P+  +  +LKVSY
Sbjct: 374 EEDYVEQSKSFVMYAGGLPIALKTLGSFLYRRSPDAWNFALAKLRNTPNKTVFDLLKVSY 433

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITM 440
            GLD+ E+ IFLD ACF    +   ++  L +      I I  LV KSL+TI SNN+I M
Sbjct: 434 VGLDEMEKKIFLDIACFSSQCEAKFIIELLYSYDVCTGIAIEVLVEKSLLTISSNNEIGM 493

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           HDL++EMG EIVRQES ++PG RSRLW   DI+ V  +NT
Sbjct: 494 HDLIREMGCEIVRQESYEEPGGRSRLWFRNDIFHVFTKNT 533


>gi|30692215|ref|NP_850655.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644403|gb|AEE77924.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1240

 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 252/789 (31%), Positives = 374/789 (47%), Gaps = 151/789 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 93  KHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 152

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---------AGYCPSLG-- 123
           + S  YASS WCL+EL +I++ +   GQIV+ +FY V+P+D           +  +    
Sbjct: 153 LLSRKYASSSWCLDELAEIMKCRQMVGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGK 212

Query: 124 -------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 213 PKEQVERWRKALEDVATIAGYHSHSWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMR 272

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  + + +S  F+ S  M NI+     
Sbjct: 273 AHMDMLEQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPR 332

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 333 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 392

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++V+  S +++  +F  NAFGQ  P  
Sbjct: 393 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVEYPSNDEAFQIFCMNAFGQKQPHE 449

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V   A  +PL L+VLGS L+G S+ EWE  + +L+      I  +++ SYD 
Sbjct: 450 GFDEIAWEVKALAGKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLDGKIGGIIQFSYDA 509

Query: 384 LDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTI------ 433
           L DE++ +FL  AC F G      + L+  FLD      + G+  L  KSL++       
Sbjct: 510 LCDEDKYLFLYIACLFNGESTTKVKELLGKFLD-----VRQGLHVLAQKSLISFDEEISW 564

Query: 434 ------------------SNNK---ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-D 471
                               NK   I MH LL++ G E  R++ +     + +L   E D
Sbjct: 565 KQIVQVLLLNKFSHVRHTKRNKSQIIRMHTLLEQFGRETSRKQFVHHRYTKHQLLVGERD 624

Query: 472 IYQVLNENTS---LPTGINLDSLK---ELYLGGCSNLKRF---------------PE-IS 509
           I +VL+++T+      GINLD  K   EL +     L+R                PE + 
Sbjct: 625 ICEVLDDDTTDNRRFIGINLDLYKNEEELNISE-KALERIHDFQFVKINYVFTHQPERVQ 683

Query: 510 CNIEDLDLKETAIEE----------LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
             +EDL      I            LPS+  N   LV+LD+  CS L+ +      L++L
Sbjct: 684 LALEDLIYHSPRIRSLKWFPYQNICLPSTF-NPEFLVELDM-RCSKLRKLWEGTKQLRNL 741

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           + ++LS    L++LP  I  L SL+ L+L +     K+P S+   + L  L L NC R+ 
Sbjct: 742 KWMDLSDSRDLKELPSSIEKLTSLQILDLRDCSSLVKLPPSINA-NNLQGLSLTNCSRVV 800

Query: 619 SLPELPCGSSIHA---RHCTSLKTLSNS---------------STLLTRSSKHWDI---- 656
            LP +   +++H    ++C+SL  L  S               S+L+   S   D+    
Sbjct: 801 KLPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLK 860

Query: 657 -FNFSNCSN 664
            F+ SNCSN
Sbjct: 861 EFDLSNCSN 869



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 85/161 (52%), Gaps = 28/161 (17%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LPT INL SL+ L L  CS LK FPEIS +I +L LK TAI+E+P SI + SRL   ++
Sbjct: 896  TLPTNINLISLRILDLTDCSQLKSFPEISTHISELRLKGTAIKEVPLSITSWSRLAVYEM 955

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +                             E L E    L+ +  L L  +D +++P  +
Sbjct: 956  S---------------------------YFESLKEFPHALDIITDLLLVSEDIQEVPPWV 988

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            K++S+L  LRL NC  L SLP+LP     I+A +C SL+ L
Sbjct: 989  KRMSRLRALRLNNCNSLVSLPQLPDSLDYIYADNCKSLERL 1029



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 5/146 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDL 538
           LP  IN ++L+ L L  CS + + P I    N+  L L+  +++ ELP SIG  + L  L
Sbjct: 779 LPPSINANNLQGLSLTNCSRVVKLPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKL 838

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIP 597
           D+  CS L  + S + ++ +L+  +LS C  L +LP  IGNL+ L  L +      E +P
Sbjct: 839 DIRGCSSLVKLPSSIGDMTNLKEFDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLP 898

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +++  +S L  L L +C +L+S PE+
Sbjct: 899 TNINLIS-LRILDLTDCSQLKSFPEI 923



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 7/135 (5%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP   N+ +L +L L  CS+L   P     + N+  LD++  +++ +LPSSIG+++ L +
Sbjct: 802 LPAIENVTNLHQLKLQNCSSLIELPLSIGTANNLWKLDIRGCSSLVKLPSSIGDMTNLKE 861

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            DL+NCS L  + S + NL+ L  L + GC KLE LP  I NL SL  L+L   D  ++ 
Sbjct: 862 FDLSNCSNLVELPSSIGNLQKLFMLRMRGCSKLETLPTNI-NLISLRILDLT--DCSQLK 918

Query: 598 SSMKQLSKLSDLRLQ 612
           S  +  + +S+LRL+
Sbjct: 919 SFPEISTHISELRLK 933


>gi|215261582|gb|ACJ64862.1| disease resistance protein RPP1-like protein R8 [Arabidopsis
           thaliana]
          Length = 1207

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 239/725 (32%), Positives = 357/725 (49%), Gaps = 108/725 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KH VF SF G DVR   +SH+  +  R+ I+ FID+ + R   I   L  AI+GSKI+IV
Sbjct: 93  KHHVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIV 152

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           + S+ YASS WCL+EL +I++ +   GQIV+ +FY VDP+D               C   
Sbjct: 153 LLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGK 212

Query: 123 G------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 213 TKEYVERWRKALEDVATIAGEHSRNWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMR 272

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  +++ +S  F+ S  + NIR     
Sbjct: 273 AHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPR 332

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 333 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 392

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++VK  S +++  +F  NAFGQ  P  
Sbjct: 393 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVKYPSNDEAFQIFCMNAFGQKQPHE 449

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V+  A  +PL L+VLGS L+G S+ EWE  + +LK     +I  +++ SYDG
Sbjct: 450 GFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDG 509

Query: 384 LDDEEQNIFLDTACFFKGN-----DQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-- 436
           L DE++ +FL  AC FK       ++ L   FLD      K G+  L  KSL++I  N  
Sbjct: 510 LCDEDKYLFLYIACLFKDELSTKVEEVLANKFLD-----VKQGLHVLAQKSLISIDENSF 564

Query: 437 ---KITMHDLLQEMGGEIVRQESIKDP-GKRSRLWHPEDIYQVLNENT---SLPTGINLD 489
               I MH LL++ G E  R++ +     KR  L    DI +VL+++T       GI+LD
Sbjct: 565 YGDTINMHTLLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGIHLD 624

Query: 490 ---SLKELYLGGCSNLKRF-------------PE-ISCNIEDLDLKETAIEE-------- 524
              S +EL +     L+R              PE +   ++DL      I          
Sbjct: 625 LYKSEEELNISE-KVLERVHDFHFVRIDASFQPERLQLALQDLICHSPKIRSLKWYSYQN 683

Query: 525 --LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
             LPS+  N   LV+L ++  S L+ +      L++L+ ++LS    L++LP  +    +
Sbjct: 684 ICLPSTF-NPEFLVELHMS-FSKLRKLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATN 740

Query: 583 LEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS---SIHARHCTSLK 638
           LE L L +     ++PSS+++L+ L  L LQ C  L  LP     +    ++  +C+SL+
Sbjct: 741 LEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEELYLENCSSLE 800

Query: 639 TLSNS 643
            L  S
Sbjct: 801 KLPPS 805



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 37/195 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKETA-IEELPSSIGNLSRLVDL 538
           LP+  N   L+ELYL  CS+L++ P    + N++ L L   + + ELP+ I N + L  L
Sbjct: 779 LPSFGNATKLEELYLENCSSLEKLPPSINANNLQQLSLINCSRVVELPA-IENATNLQVL 837

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-------- 590
           DL NCS L  +   + +  +L++L++SGC  L KLP  IG++ +L+ L+L+         
Sbjct: 838 DLHNCSSLLELPPSIASATNLKKLDISGCSSLVKLPSSIGDMTNLDVLDLSNCSSLVELP 897

Query: 591 -------------------KDFEKIPSSM-----KQLSKLSDLRLQNCKRLQSLPELPCG 626
                              K F +I + +     +++S+L DLR+ NC  L SLP+LP  
Sbjct: 898 ININLKSFLAVNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDS 957

Query: 627 -SSIHARHCTSLKTL 640
            + ++A +C SL+ L
Sbjct: 958 LAYLYADNCKSLERL 972



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 23/213 (10%)

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---D 516
           P  RS  W+    YQ    N  LP+  N + L EL++   S L++  E +  + +L   D
Sbjct: 671 PKIRSLKWYS---YQ----NICLPSTFNPEFLVELHMSF-SKLRKLWEGTKQLRNLKWMD 722

Query: 517 LKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           L  +  ++ELP+ +   + L +L L +CS L  + S +  L SL+RL L  C  L +LP 
Sbjct: 723 LSNSEDLKELPN-LSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELP- 780

Query: 576 EIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA--- 631
             GN   LE L L      EK+P S+   + L  L L NC R+  LP +   +++     
Sbjct: 781 SFGNATKLEELYLENCSSLEKLPPSINA-NNLQQLSLINCSRVVELPAIENATNLQVLDL 839

Query: 632 RHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
            +C+SL  L  S    T   K     + S CS+
Sbjct: 840 HNCSSLLELPPSIASATNLKK----LDISGCSS 868


>gi|297815592|ref|XP_002875679.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321517|gb|EFH51938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1196

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 239/735 (32%), Positives = 361/735 (49%), Gaps = 101/735 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR   +SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 52  KHDVFPSFHGADVRRTLLSHIMESFRRKGIDTFIDNNIERSKPIGPELKEAIKGSKIAIV 111

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-AGYCPSLG---------- 123
           + S+ YASS WCL+EL +I++ +   GQIV+ +FY VDP+D        G          
Sbjct: 112 LLSKNYASSSWCLDELAEIMKCREVLGQIVMTIFYEVDPTDIKKQTGDFGKAFRKTCKGK 171

Query: 124 -------WM-GIFDIP----------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+           ++E+ +IE    D+S  L+   PS + + LVG+ 
Sbjct: 172 TKEHIERWRKALKDVAIIAGEHSRNWSNEAEMIEKISIDVSNMLNLSIPSRDFEGLVGMR 231

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  + + +S  F+ S  M NI+     
Sbjct: 232 AHMDRMEQFLRLDLDEVRMIGIWGPPGIGKTTIARFLLNQVSDRFQLSTIMVNIKGCYPR 291

Query: 221 ---DESE--------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE                K   +   HL   + RL   KV++V  ++  L Q++ L 
Sbjct: 292 PCFDEYTAQLQLQTQMLSQLIKHKDITISHLGVAQERLKDKKVILVLDEVDHLGQLEALA 351

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
             +  F PGSR+IITT D+ +LK H    +  V++V   S +++  +F  NAFGQ  P  
Sbjct: 352 KEIQWFGPGSRIIITTEDLGVLKAHG---INQVYKVDFPSSDEAFQIFCMNAFGQKQPHE 408

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF  L+  VI  A  +PL L+VLGS L+GMS+ EWE A+ +LK      I  +++ SYD 
Sbjct: 409 GFRNLAWEVIALAGELPLGLKVLGSALRGMSKPEWERALPRLKASLDGKIGSIIQFSYDA 468

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFS-AKIGISRLVGKSLVTISNNKITMHD 442
           L DE++ +FL  AC F     + V   L A +FS  + G+  L  KSL++I   +I MH 
Sbjct: 469 LCDEDKYLFLYIACLFNFASVHRVEEAL-ANKFSHVRHGLHVLHEKSLISIEYERIQMHT 527

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENTSLP---TGINLDSLK------ 492
           LLQ+ G +I R++ +     + +L   E DI  V + +TS      GINLD  K      
Sbjct: 528 LLQQFGRKISRKQFVHHGLTKHQLLVGERDICDVFDYDTSDSRRFIGINLDLSKTEEELN 587

Query: 493 ---------------ELYLGGCSNLKRFPEI-------SCNIEDLDLKETAIEELPSSIG 530
                           +Y       KR   +       S  I  L+ +      LPS+  
Sbjct: 588 ISEKALERMHDFQFVRIYGDDLGQTKRLQSVLQGLIYHSQKIRSLNWRYFQDICLPSTF- 646

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
           N   LV+L+L + S L+ +      LK+L+ ++L G   L++LP ++    +LE ++L  
Sbjct: 647 NPEFLVELNLQD-SKLQKLWEGTKQLKNLKWMDLGGSRDLKELP-DLSTATNLEEVDLQY 704

Query: 591 -KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKTL------ 640
                ++PSS+   +KL  L L++C  L  LP +   S    ++  +C+SL  L      
Sbjct: 705 CSSLVELPSSIGNATKLERLYLRDCSSLVELPSIGNASKLERLYLDNCSSLVKLPSSINA 764

Query: 641 SNSSTLLTRSSKHWD 655
           SN    +  +SK W+
Sbjct: 765 SNLQEFIENASKLWE 779



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 79/160 (49%), Gaps = 29/160 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT I+L+SL+ L L  CS LKRFPEIS NI  L L  TAI+E+P SI + SRL D    
Sbjct: 863 LPTNIDLESLRTLDLRNCSQLKRFPEISTNIAYLRLTGTAIKEVPLSIMSWSRLYDF--- 919

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                                   G    E L E    L+ +  L L E D +++   +K
Sbjct: 920 ------------------------GISYFESLKEFPHALDIITQLQLNE-DIQEVAPWVK 954

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            +S+L  LRL NC  L SLP+     + I A +C SL+ L
Sbjct: 955 GMSRLRVLRLYNCNNLVSLPQFSDSLAYIDADNCQSLERL 994



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 63/222 (28%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNL----------- 532
            L +LK + LGG  +LK  P++S   N+E++DL+  +++ ELPSSIGN            
Sbjct: 670 QLKNLKWMDLGGSRDLKELPDLSTATNLEEVDLQYCSSLVELPSSIGNATKLERLYLRDC 729

Query: 533 ------------SRLVDLDLTNCSGLKSVSSRL--CNLK--------------------- 557
                       S+L  L L NCS L  + S +   NL+                     
Sbjct: 730 SSLVELPSIGNASKLERLYLDNCSSLVKLPSSINASNLQEFIENASKLWELNLLNCSSLL 789

Query: 558 ----------SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKL 606
                     +L+ L +SGC  L KLP  IG++  L+  +L+      ++PS++ +L KL
Sbjct: 790 ELPPSIGTATNLKELYISGCSSLVKLPSSIGDMTKLKKFDLSNCSSLVEVPSAIGKLQKL 849

Query: 607 SDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           S L++  C +L+ LP   +L    ++  R+C+ LK     ST
Sbjct: 850 SKLKMYGCSKLEVLPTNIDLESLRTLDLRNCSQLKRFPEIST 891



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 80/180 (44%), Gaps = 45/180 (25%)

Query: 464 SRLWHPEDIYQVLNENTSLPTGINLDS-LKELYLGGCSNLKRFPEISCNIEDLDLKETAI 522
           S+LW  E      +    LP  I   + LKELY+ GCS+L +                  
Sbjct: 775 SKLW--ELNLLNCSSLLELPPSIGTATNLKELYISGCSSLVK------------------ 814

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
             LPSSIG++++L   DL+NCS L  V S +  L+ L +L + GC KLE LP  I +LES
Sbjct: 815 --LPSSIGDMTKLKKFDLSNCSSLVEVPSAIGKLQKLSKLKMYGCSKLEVLPTNI-DLES 871

Query: 583 LE---------------------YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L                      YL L     +++P S+   S+L D  +   + L+  P
Sbjct: 872 LRTLDLRNCSQLKRFPEISTNIAYLRLTGTAIKEVPLSIMSWSRLYDFGISYFESLKEFP 931


>gi|359473398|ref|XP_002268324.2| PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Vitis
           vinifera]
          Length = 1378

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 199/547 (36%), Positives = 287/547 (52%), Gaps = 84/547 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           +++ +SS     H + DVFLSFRG+D RHNF  HL   L R  I  F D++ LNRG++I+
Sbjct: 7   VSTPTSSTTAFRH-RWDVFLSFRGEDTRHNFTDHLYTQLDRNGIRAFRDNEGLNRGDDIN 65

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
             L  AIE S   I I S  YASSRWCL EL K+ E +    ++++PVFY VDPSD    
Sbjct: 66  SGLLDAIEDSAAFIAIISPNYASSRWCLEELAKVCECR----RLILPVFYQVDPSDVRRQ 121

Query: 117 ---------------GYCPSLGWMGIFDIP----------TSESVLIEGNVNDISKKLSD 151
                          G    L W    +              E  LI+  V  +  +L++
Sbjct: 122 KGRFHEDFGKLEARFGEDKVLRWRKAMEKAGGIAGWVFNGDEEPNLIQTLVKRVLAELNN 181

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
             P       VG++S I+E+ + L   S     +G  G+GG+GKTT+A A+Y+ + +HFE
Sbjct: 182 T-PLSVAAYTVGLDSRIEELLNLLDLKSNCTRVLGFHGMGGVGKTTLAKALYNKLVAHFE 240

Query: 212 GSYFMQNIRDE----------------------------SEKVGGLANIHLNFERRRLSR 243
              F+ N+++                             SE   GL  I     RR +  
Sbjct: 241 CRSFISNVKETLAQQDEDSLLSLHNKLINDLSMSEASPVSEVNAGLVAI-----RRIMHE 295

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDG---FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVK 300
            +VL+V  D+ D  Q++++IGR      F  GSR+IITTRD  +L   R      +FEV+
Sbjct: 296 KRVLLVMDDVDDASQLEVVIGRRKWRQFFYGGSRIIITTRDRGVL---RDLHENELFEVQ 352

Query: 301 ELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWE 359
            L++++SL LFS +A  +  P   F  LSN ++    G+PLAL+V GS+L      +EWE
Sbjct: 353 GLNFSESLQLFSYHALRREKPTEDFWNLSNEIVSLTGGLPLALEVFGSFLYDKRIIKEWE 412

Query: 360 SAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF-----KGNDQYLVMNFLDAC 414
            A+ KLK++   ++Q VLK+S+DGLD++E++IFLD ACFF     K  D    ++ L  C
Sbjct: 413 DALQKLKQIRPSNLQDVLKISFDGLDEQEKDIFLDIACFFVKMRLKRED---AIDILKGC 469

Query: 415 RFSAKIGISRLVGKSLV-TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
            F A I I  L  KSL+ T  +  + MHD L++MG +IV+ E+  DPG RSRLW   ++ 
Sbjct: 470 GFRADITIKVLTEKSLIKTYEDGILWMHDQLRDMGKQIVQHENPSDPGSRSRLWDHNEVM 529

Query: 474 QVLNENT 480
            VL + T
Sbjct: 530 SVLQDQT 536



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 3/137 (2%)

Query: 489 DSLKELYLGGCSNLKRFPEISCN--IEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSG 545
           ++L  + L GC++L   P++S +  +E L L+   ++  +  S+G+L  L+ L+L  CS 
Sbjct: 673 ENLMVMNLSGCNSLTDLPDVSGHQTLEKLILERCLSLVTIHKSVGDLRTLLHLNLMGCSN 732

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L    S +  L+ L   NLSGC KL++LPE++ ++ SL  L + +     +P S+ +L K
Sbjct: 733 LLEFPSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLRELLVDKTAIVNLPDSIFRLKK 792

Query: 606 LSDLRLQNCKRLQSLPE 622
           L    L +C  L+ LP+
Sbjct: 793 LEKFSLDSCSSLKQLPD 809



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 5/140 (3%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE----TAIEELPSSIGNLSRLVDLDLTN 542
           +L +L  L L GCSNL  FP     +  L++      T ++ELP  + +++ L +L L +
Sbjct: 718 DLRTLLHLNLMGCSNLLEFPSDVSGLRHLEIFNLSGCTKLKELPEDMSSMTSLREL-LVD 776

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
            + + ++   +  LK L + +L  C  L++LP+ IG L SL  L+L     E++P S+  
Sbjct: 777 KTAIVNLPDSIFRLKKLEKFSLDSCSSLKQLPDCIGRLSSLRELSLNGSGLEELPDSIGS 836

Query: 603 LSKLSDLRLQNCKRLQSLPE 622
           L+ L  L L  C+ L ++P+
Sbjct: 837 LTNLERLSLMRCRLLSAIPD 856



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 27/177 (15%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRL 535
            +LP  I  L  L++  L  CS+LK+ P+      ++ +L L  + +EELP SIG+L+ L
Sbjct: 781 VNLPDSIFRLKKLEKFSLDSCSSLKQLPDCIGRLSSLRELSLNGSGLEELPDSIGSLTNL 840

Query: 536 VDLDLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
             L L  C                       S +K + + + +L  LR L+LS C  L K
Sbjct: 841 ERLSLMRCRLLSAIPDSVGRLRSLIELFICNSSIKELPASIGSLSQLRYLSLSHCRSLIK 900

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
           LP+ I  L SL    L       +P  +  L+ L  L ++NC+   S PE+   SS+
Sbjct: 901 LPDSIEGLVSLARFQLDGTLLTGVPDQVGSLNMLETLEMRNCEIFSSFPEINNMSSL 957



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 26/161 (16%)

Query: 488 LDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L  L+   L GC+ LK  PE      ++ +L + +TAI  LP SI  L +L    L +CS
Sbjct: 743 LRHLEIFNLSGCTKLKELPEDMSSMTSLRELLVDKTAIVNLPDSIFRLKKLEKFSLDSCS 802

Query: 545 GLKSVSSRLCNLKSLRRLNLSG-----------------------CLKLEKLPEEIGNLE 581
            LK +   +  L SLR L+L+G                       C  L  +P+ +G L 
Sbjct: 803 SLKQLPDCIGRLSSLRELSLNGSGLEELPDSIGSLTNLERLSLMRCRLLSAIPDSVGRLR 862

Query: 582 SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           SL  L +     +++P+S+  LS+L  L L +C+ L  LP+
Sbjct: 863 SLIELFICNSSIKELPASIGSLSQLRYLSLSHCRSLIKLPD 903



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 31/208 (14%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKETAIEELPSSIGNLSRL 535
            T LP  I  L+ L  L L  C  L+R P       N+  L +  TA+ ELP + G LS L
Sbjct: 968  TELPESIGKLERLNMLMLNNCKQLQRLPASIRKLKNLCSLLMTRTAVTELPENFGMLSNL 1027

Query: 536  VDLDLTNCSGLKSVSSR--------------------LCNLKSLRRLNLSGCLKLEKLPE 575
              L +      ++                          NL  L+ L+ +   K+     
Sbjct: 1028 RTLKMAKHPDPEATGEHTELTNLILQENPKPVVLLMSFSNLFMLKELD-ARAWKISGSIS 1086

Query: 576  EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
            +   L SLE LNL   +F  +PSS++ LS L +L L +CK + SLP LP     ++  +C
Sbjct: 1087 DFEKLSSLEDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIKLNVSNC 1146

Query: 635  TSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
             +L+++S+ S L     K  +  N +NC
Sbjct: 1147 CALQSVSDLSNL-----KSLEDLNLTNC 1169



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 42/211 (19%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
            LP  I +L +L+ L L  C  L   P+    +    +L +  ++I+ELP+SIG+LS+L  
Sbjct: 830  LPDSIGSLTNLERLSLMRCRLLSAIPDSVGRLRSLIELFICNSSIKELPASIGSLSQLRY 889

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF---- 593
            L L++C  L  +   +  L SL R  L G L L  +P+++G+L  LE L +   +     
Sbjct: 890  LSLSHCRSLIKLPDSIEGLVSLARFQLDGTL-LTGVPDQVGSLNMLETLEMRNCEIFSSF 948

Query: 594  -------------------EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC 634
                                ++P S+ +L +L+ L L NCK+LQ LP             
Sbjct: 949  PEINNMSSLTTLILDNSLITELPESIGKLERLNMLMLNNCKQLQRLP------------- 995

Query: 635  TSLKTLSN-SSTLLTRSSKHWDIFNFSNCSN 664
             S++ L N  S L+TR++      NF   SN
Sbjct: 996  ASIRKLKNLCSLLMTRTAVTELPENFGMLSN 1026



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 456  SIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIED 514
            SI D  K S L   ED+    N   SLP+ +  L  LK L+L  C  +   P +  ++  
Sbjct: 1084 SISDFEKLSSL---EDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLPSSLIK 1140

Query: 515  LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            L++      +  S + NL  L DL+LTNC  +  +    C LKSL+R   SGC
Sbjct: 1141 LNVSNCCALQSVSDLSNLKSLEDLNLTNCKKIMDIPGLQC-LKSLKRFYASGC 1192



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 37/238 (15%)

Query: 401  GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG--GEIVRQESIK 458
            G  + L M  L+ C+   ++  S    K+L ++   +  + +L +  G    +   +  K
Sbjct: 975  GKLERLNMLMLNNCKQLQRLPASIRKLKNLCSLLMTRTAVTELPENFGMLSNLRTLKMAK 1034

Query: 459  DPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKELYLGG---CSNLKRFPEISCN 511
             P   +   H E    +L EN      L +  NL  LKEL         ++  F ++S +
Sbjct: 1035 HPDPEATGEHTELTNLILQENPKPVVLLMSFSNLFMLKELDARAWKISGSISDFEKLS-S 1093

Query: 512  IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
            +EDL+L       LPSS+  LS L +L L +C  + S+        SL +LN+S C  L+
Sbjct: 1094 LEDLNLGHNNFCSLPSSLQGLSVLKNLFLPHCKEINSLPPLP---SSLIKLNVSNCCALQ 1150

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
             +  ++ NL+SLE                       DL L NCK++  +P L C  S+
Sbjct: 1151 SV-SDLSNLKSLE-----------------------DLNLTNCKKIMDIPGLQCLKSL 1184


>gi|27466164|gb|AAN86124.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1055

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 233/724 (32%), Positives = 365/724 (50%), Gaps = 91/724 (12%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL 62
           +SSS ++ I   ++ VF SF G DVR  F+SHL++    + I TF D K+ RG  I P L
Sbjct: 2   ASSSCLSCIK--RYQVFSSFHGPDVRKGFLSHLHSLFASKGITTFNDQKIERGQTIGPEL 59

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG----- 117
              I  +++SIV+ S+ YASS WCL+ELV+IL  K    QIV+ VFY VDPSD       
Sbjct: 60  IQGIREARVSIVVLSKKYASSSWCLDELVEILNCKEALVQIVMTVFYEVDPSDVKKQSGE 119

Query: 118 -------------------YCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLF 153
                              +  +L  + I     S     E+ +I+  V D+S KL +L 
Sbjct: 120 FGKVFEKTCQGKNEEVEQRWRNALADVAIIAGEHSLNWDNEADMIQKIVTDVSDKL-NLT 178

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           PS + + +VG+E+ + E++S L   S E   +GIWG  GIGKTTIA A++  +SS F   
Sbjct: 179 PSRDFEGMVGMEAHLTELKSLLSLESDEVKMIGIWGPAGIGKTTIARALFDRLSSIFPLI 238

Query: 214 YFMQNIRDESEKVGG-----------LANI---------HLNFERRRLSRMKVLIVFYDL 253
            FM+N++     V             L+ I         HL   R RL   +VLI+  D+
Sbjct: 239 CFMENLKGSLTGVADHDSKLRLQNQLLSKILNQENMKIHHLGAIRERLHDQRVLIILDDV 298

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            DL+Q+++L      F  GSR+I+TT D ++LK HR   +  ++ V   S  ++L +   
Sbjct: 299 DDLEQLEVLAEDPSWFGSGSRIIVTTEDKKILKAHR---IKDIYHVNFPSKKEALEILCL 355

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           + F Q+    GF EL+N V +    +PL L+V+GS L+G S++EWE  ++ ++      I
Sbjct: 356 STFKQSSIPDGFEELANKVAELCGNLPLGLRVVGSSLRGESKQEWELQLSSIEASLDGKI 415

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           +  LKV Y+ L  + Q++FL  ACFF   +   V   L         G + L  +SLV I
Sbjct: 416 ETTLKVGYERLSKKNQSLFLHIACFFNNQEVDYVTALLADRNLDVGNGFNILADRSLVRI 475

Query: 434 SN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS 490
           S    I MH LLQ++G +IV ++S  +PGKR  +  PE+I  VL + T   +  GI+ D+
Sbjct: 476 STYGDIVMHHLLQQLGRQIVHEQS-DEPGKREFIIEPEEIRDVLTDETGTGSVKGISFDA 534

Query: 491 --LKELYLG-----GCSNLK---------------RFPEISCNIEDLDL---KETAIEEL 525
              +E+ +G     G  NL+               + PE    +  + L   +    + L
Sbjct: 535 SNSEEVSVGKGAFEGMPNLQFLRIYREYFNSEGTLQIPEDMKYLPPVRLLHWENYPRKSL 594

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           P    +   LV + +   S LK +   +  L +++ ++LS  ++L+++P  + N  +LE 
Sbjct: 595 PQRF-HPEHLVKIYMPR-SKLKKLWGGIQPLPNIKSIDLSFSIRLKEIP-NLSNATNLET 651

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLS 641
           LNL   K   ++PSS+  L KL  L++  C+ L+ +P    L     +    C+ L+T  
Sbjct: 652 LNLTHCKTLVELPSSISNLHKLKKLKMSGCENLRVIPTNINLASLERLDMSGCSRLRTFP 711

Query: 642 NSST 645
           + S+
Sbjct: 712 DISS 715



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 39/184 (21%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ L + GCS L+ FP+IS NI+ L+L +T IE++P S+G  SRL+ L+++
Sbjct: 687 IPTNINLASLERLDMSGCSRLRTFPDISSNIDTLNLGDTKIEDVPPSVGCWSRLIQLNIS 746

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
            C  L             R +++  C+ +               L L   D E+IP S+ 
Sbjct: 747 -CGPLT------------RLMHVPPCITI---------------LILKGSDIERIPESII 778

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKH--WDIFN 658
            L++L  L +++C +L+S+  LP     + A  C SLK +        R S H    I N
Sbjct: 779 GLTRLHWLIVESCIKLKSILGLPSSLQGLDANDCVSLKRV--------RFSFHNPIHILN 830

Query: 659 FSNC 662
           F+NC
Sbjct: 831 FNNC 834



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 29/200 (14%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLK-ETAIEELPSSIGNLSRLVD 537
           SLP   + + L ++Y+      K +  I    NI+ +DL     ++E+P+ + N + L  
Sbjct: 593 SLPQRFHPEHLVKIYMPRSKLKKLWGGIQPLPNIKSIDLSFSIRLKEIPN-LSNATNLET 651

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE------------- 584
           L+LT+C  L  + S + NL  L++L +SGC  L  +P  I NL SLE             
Sbjct: 652 LNLTHCKTLVELPSSISNLHKLKKLKMSGCENLRVIPTNI-NLASLERLDMSGCSRLRTF 710

Query: 585 --------YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTS 636
                    LNL +   E +P S+   S+L  L + +C  L  L  +P   +I     + 
Sbjct: 711 PDISSNIDTLNLGDTKIEDVPPSVGCWSRLIQLNI-SCGPLTRLMHVPPCITILILKGSD 769

Query: 637 LKTLSNSSTLLTRSSKHWDI 656
           ++ +  S   LTR   HW I
Sbjct: 770 IERIPESIIGLTR--LHWLI 787


>gi|449447743|ref|XP_004141627.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1127

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 235/687 (34%), Positives = 334/687 (48%), Gaps = 93/687 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K DVFLSFRG+D R  F  HL  AL R+ I TF D+ ++  G  I  +L ++I+ S+ +I
Sbjct: 46  KFDVFLSFRGEDTRGGFTDHLYKALTRKGISTFRDENEIEEGEHIPSNLLASIDASRFAI 105

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ SE YASSRWCL EL ++ E K +    V+P+FY VDPS                   
Sbjct: 106 VVVSEDYASSRWCLEELARMFECKKE----VLPIFYKVDPSHVKNQSGTFEEAFVKHEKR 161

Query: 117 ---GYCPSLGWMGIF-----------DIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
              G      W                  + ES +IE     I K+L        +DQLV
Sbjct: 162 FGRGDGKVQSWRTFLTELANTKAWLSQSWSHESNIIEEITTKIWKRLKPNLTVIKEDQLV 221

Query: 163 GVESIIKEIESQLLSGSTEFNT------VGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           G+ S I ++ S L+  S + +       VGI G+GGIGKTTIA   Y  I   FE   F+
Sbjct: 222 GINSKINKLSSLLIPNSDDDDADDDVIFVGIHGMGGIGKTTIARVCYERIRDEFEAHCFL 281

Query: 217 QNIRDESEKVGG---------------LANIH-LNFER------RRLSRMKVLIVFYDLT 254
            N+R+   +  G               L N H ++ E       + + R K L+V  D+ 
Sbjct: 282 SNVRENYIRTLGNLSCLQTKLLSSMFSLKNNHIMDVEEGTAMINKAIFRKKTLLVLDDVD 341

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
              QI  LI   + F  GSRVIITTR+   L N  G  V  +FE+ EL Y ++L L S +
Sbjct: 342 SSDQIKGLIPDNNSFGNGSRVIITTRNADFLSNEFG--VKRIFEMDELKYEEALQLLSLS 399

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP--HMD 372
           AF +  P  G+LE S  ++K   G PLAL++LGS L+  +   W   + ++      H  
Sbjct: 400 AFMKTCPKEGYLEHSKKIVKVVGGHPLALKLLGSSLRNKNLSVWNEVIEEVGGGGNIHEK 459

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           I K LKVSYDGLD+ E+ IFLD ACFF G  + +V   L+ C F AK  I  L+ KSL+T
Sbjct: 460 IFKCLKVSYDGLDEREREIFLDVACFFNGKRREVVEEILNGCGFYAKTRIELLIQKSLLT 519

Query: 433 IS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE------------N 479
           +S +NK+ MH+LLQEMG +IVR + ++D     RL   +DI  V+ E             
Sbjct: 520 LSYDNKLHMHNLLQEMGRKIVRDKHVRD-----RLMCHKDIKSVVTEALIQSIFFKSSSK 574

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED----LDLKETAIEELPSSIGNLSRL 535
             +   I    + +L L    N++   ++  +I      L  K   +E LP       +L
Sbjct: 575 NMVEFPILFSRMHQLRLLNFRNVRLKNKLEYSIPSELRYLKWKGYPLEFLPIDSSEECKL 634

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
           ++L + + S LK    +  NL  L+ + L+   KL K P    N+ +L+ L L +     
Sbjct: 635 IELHMCH-SNLKQFWQQEKNLVELKYIKLNSSQKLSKTP-NFANIPNLKRLELEDCTSLV 692

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            I  S+    KL  L L++C  L +LP
Sbjct: 693 NIHPSIFTAEKLIFLSLKDCINLTNLP 719



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 97/233 (41%), Gaps = 75/233 (32%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           T+LP+ IN+  L+ L L GCS +K+ PE S N      L L  T+I  LPSSI +LS L 
Sbjct: 716 TNLPSHINIKVLEVLILSGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASLSHLT 775

Query: 537 -----------------------DLDLTNCSGLKSVSSR--------------------- 552
                                   LD++ CS L S   +                     
Sbjct: 776 ILSLANCKMLIDISNAIEMTSLQSLDVSGCSKLGSRKGKGDNVELGEVNVRETTRRRRND 835

Query: 553 ------------LCN--------------LKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
                       LCN              L SL +LNL  C  LE +P+ I  + SL  L
Sbjct: 836 DCNNIFKEIFLWLCNTPATGIFGIPSLAGLYSLTKLNLKDC-NLEVIPQGIECMVSLVEL 894

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS-SIHARHCTSLK 638
           +L+  +F  +P+S+ +L  L  LR+  CK+L   P+LP     + ++ C SLK
Sbjct: 895 DLSGNNFSHLPTSISRLHNLKRLRINQCKKLVHFPKLPPRILFLTSKDCISLK 947



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 14/171 (8%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           NL  LK + L     L + P  +   N++ L+L++ T++  +  SI    +L+ L L +C
Sbjct: 653 NLVELKYIKLNSSQKLSKTPNFANIPNLKRLELEDCTSLVNIHPSIFTAEKLIFLSLKDC 712

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L ++ S + N+K L  L LSGC K++K+PE  GN   L  L+L       +PSS+  L
Sbjct: 713 INLTNLPSHI-NIKVLEVLILSGCSKVKKVPEFSGNTNRLLQLHLDGTSISNLPSSIASL 771

Query: 604 SKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL--SNSSTLLTRSSK 652
           S L+ L L NCK L  +         +A   TSL++L  S  S L +R  K
Sbjct: 772 SHLTILSLANCKMLIDIS--------NAIEMTSLQSLDVSGCSKLGSRKGK 814



 Score = 42.7 bits (99), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 515 LDLKETAIEELPSSIGNLSRLVDLDLT--NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
           L+LK+  +E +P  I  +  LV+LDL+  N S L +  SRL NLK LR       +   K
Sbjct: 871 LNLKDCNLEVIPQGIECMVSLVELDLSGNNFSHLPTSISRLHNLKRLRINQCKKLVHFPK 930

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           LP  I  L S + ++L  KDF  I S +  L  + ++ L NC ++
Sbjct: 931 LPPRILFLTSKDCISL--KDFIDI-SKVDNLYIMKEVNLLNCYQM 972


>gi|356545161|ref|XP_003541013.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1114

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 241/736 (32%), Positives = 362/736 (49%), Gaps = 99/736 (13%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
            SSSSS  M     +DVF+SFRG+D R+N  S L  +L  + I+ F D++ L +G  I+P
Sbjct: 9   CSSSSSHVM---RTYDVFVSFRGEDTRNNITSFLLGSLESKGIDVFKDNEDLRKGESIAP 65

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----- 115
            L  AIE S+I +V+FS+ YASS WCL EL  I          V+P+FY VDPSD     
Sbjct: 66  ELLQAIEVSRIFVVVFSKNYASSTWCLRELTHICNCTQTSPGSVLPIFYDVDPSDVRKLS 125

Query: 116 -------AGY--------------------CPSLGWMGIFDI-PTSESVLIEGNVNDISK 147
                  A Y                       +G +G +DI   S++  IE  V  I K
Sbjct: 126 GSYEEAFAKYKERFREDREKMKEVQTWREALKEVGELGGWDIRDKSQNAEIEKIVQTIIK 185

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNI 206
           KL   F S  KD LVG+ES ++E+   L  GS  +   VGI G+ GIGKT +A A+Y  I
Sbjct: 186 KLGSKFSSLPKDNLVGMESRVEELVKCLRLGSVNDVRVVGISGMSGIGKTELARALYERI 245

Query: 207 SSHFEGSYFMQNIRDESEKVGGLA-------------NIHLN-------FERRRLSRMKV 246
           S  F+    + ++    +  G L              N+ +           +RL   K 
Sbjct: 246 SDQFDVHCLVDDVSKIYQDSGRLGVQKQLLSQCLNEKNLEIYDVSQGTCLAWKRLQNAKA 305

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVP-----GSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
           L+VF ++ + +Q+ +  G  D  +      GSR+II +RD  +L+ H    V  V++V  
Sbjct: 306 LVVFDEVVNERQLQMFTGNRDSLLRECLGGGSRIIIISRDEHILRTHG---VDDVYQVPL 362

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
           L   +++ LF +NAF  N   +G+ E +++++  A G PLA++ +GS L G++  +W SA
Sbjct: 363 LDREEAVQLFCKNAFKDNFIMSGYAEFADVILSQAQGNPLAIKAVGSSLFGLNAPQWRSA 422

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
           V KL+     DI  VL++S+D LDD  + IFLD ACFF       VM  LD   F  + G
Sbjct: 423 VAKLREQKSRDIMDVLRISFDELDDTNKEIFLDIACFFNNFYVKSVMEILDFRGFYPEHG 482

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
           +  L  +SL+      I MH LL ++G  IVR++S K+P   SRLW  +D+Y++++ N +
Sbjct: 483 LQVLQDRSLIINEYGIIGMHGLLIDLGRCIVREKSPKEPSNWSRLWKYQDLYKIMSNNMA 542

Query: 482 LPT----------------GINLDS------LKELYLGGCSNLKRFPEISCNIEDLDLKE 519
                               I +D+      LK L L G ++      +S  +  +   +
Sbjct: 543 AEKLEAIAVDYESDDEGFHEIRVDALSKMSHLKLLKLWGVTSSGSLNHLSDELGYITWDK 602

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
                LP S    ++LV+L L   S +K +      L +LRRL LS    L +LP ++G 
Sbjct: 603 YPFVCLPKSF-QPNKLVELCLEY-SNIKHLWKDRKPLHNLRRLVLSHSKNLIELP-DLGE 659

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH----- 633
             +LE+L+L      +KI  S+  L KL+ L L++C  L  LP       ++ +H     
Sbjct: 660 ALNLEWLDLKGCIKLKKINPSIGLLRKLAYLNLKDCTSLVELPHF--KEDLNLQHLTLEG 717

Query: 634 CTSLKTLSNSSTLLTR 649
           CT LK ++ S  LL +
Sbjct: 718 CTHLKHINPSVGLLRK 733



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 14/161 (8%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
            SLP  I  L+SLK L L GCS L     +    +   LK+  I E  +   ++S +V  
Sbjct: 746 VSLPNSILCLNSLKYLSLYGCSGLYNSGLLKEPRDAELLKQLCIGEASTDSKSISSIVKR 805

Query: 539 DLTNCSGL-------KSVSSRLCNLK----SLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
                  L        SV   L +      S+ +L+LS C  L ++P+ IGNL  LE LN
Sbjct: 806 WFMWSPRLWYSRAHNDSVGCLLPSAPTIPPSMIQLDLSYC-NLVQIPDAIGNLHCLEILN 864

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
           L    F  +P  +K LSKL  L+L +CK L+  P+LP  ++
Sbjct: 865 LEGNSFAALPD-LKGLSKLRYLKLDHCKHLKDFPKLPARTA 904



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 27/137 (19%)

Query: 488 LDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +L+ L L    NL   P++  + N+E LDLK    ++++  SIG L +L  L+L +C+
Sbjct: 637 LHNLRRLVLSHSKNLIELPDLGEALNLEWLDLKGCIKLKKINPSIGLLRKLAYLNLKDCT 696

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L  +     +L +L+ L L GC  L+ +   +G L  LEYL                  
Sbjct: 697 SLVELPHFKEDL-NLQHLTLEGCTHLKHINPSVGLLRKLEYL------------------ 737

Query: 605 KLSDLRLQNCKRLQSLP 621
                 L++CK L SLP
Sbjct: 738 -----ILEDCKSLVSLP 749



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%)

Query: 490 SLKELYLGGCSNLKRF-PEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           +L+ L L GC  LK+  P I     +  L+LK+ T++ ELP    +L+ L  L L  C+ 
Sbjct: 662 NLEWLDLKGCIKLKKINPSIGLLRKLAYLNLKDCTSLVELPHFKEDLN-LQHLTLEGCTH 720

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
           LK ++  +  L+ L  L L  C  L  LP  I  L SL+YL+L
Sbjct: 721 LKHINPSVGLLRKLEYLILEDCKSLVSLPNSILCLNSLKYLSL 763


>gi|224144405|ref|XP_002325279.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862154|gb|EEE99660.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 534

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 203/523 (38%), Positives = 281/523 (53%), Gaps = 70/523 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F+ HL  AL    I TF DD +L+RG EISP+LS AI  SKIS+V
Sbjct: 10  YDVFLSFRGEDTRKQFIDHLYVALAHAGIHTFRDDDELSRGEEISPALSYAIRESKISLV 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FS+ YASSRWCL+ELV ILE + K GQIVVPVFY +DPSD       Y  +        
Sbjct: 70  VFSKNYASSRWCLDELVTILE-RRKMGQIVVPVFYDIDPSDVRKQTGSYADAFARHGERF 128

Query: 124 ---------WMGIF------------DIPTS-ESVLIEGNVNDISKKLSD---LFPSDNK 158
                    W G              DI    ES LI   V DI  KLS     FP    
Sbjct: 129 NGETDRVIKWRGALTEAANLSGWSLKDIANGYESELIRRIVGDILVKLSHNYFHFP---- 184

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           +Q VG++S +++I   L   + +   VG+ G+ G GKTT+A A+++ +   F    F+ N
Sbjct: 185 NQTVGIDSRVEDIIKSLTVVTEDVRIVGLHGMSGCGKTTLAKAVFNKLYHGFGKRCFLFN 244

Query: 219 IRDESEKVGGLANIHLNFERR----------------------RLSRMKVLIVFYDLTDL 256
           +++ S++  G   +   F RR                      RL   +VL V  D+   
Sbjct: 245 VKEMSQQPNGRVRLQEEFLRRVFKLGEFKQIDDVDKGMNMIKERLWDQRVLAVLDDVDQP 304

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q+  L+     F PGS VIITT +  LL       V   + V +LS+ +SL LFSR+AF
Sbjct: 305 EQLHELVEVRSWFGPGSIVIITTGNEHLLTQ---LEVNVKYRVAKLSHAESLELFSRHAF 361

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
               P   +  LSN V+ Y  G PLAL++LGS+L    + EWES ++ LK++    IQ+ 
Sbjct: 362 RDTQPIEDYAMLSNDVLSYCGGHPLALELLGSFLFKREKPEWESLIDSLKKITPDQIQQK 421

Query: 377 LKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTIS 434
           L++S++ L     ++IFLD ACFF G D+  V   LDA   F+ +I I  L+ +S +TI 
Sbjct: 422 LRISFEALGGGPVKSIFLDIACFFVGRDKEYVKTILDARYGFNTEIAIKNLIERSFITID 481

Query: 435 NNK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           + K I +++LL++MG EI R+ S   PG RSR+   +D   VL
Sbjct: 482 SKKEINLNNLLRDMGREINREMSPDHPGNRSRICFHDDALDVL 524


>gi|332330341|gb|AEE43927.1| TIR-NBS-LRR resistance protein muRdr1C [Rosa multiflora]
          Length = 1139

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 241/739 (32%), Positives = 375/739 (50%), Gaps = 114/739 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F  +L   L R  I TF DD +L RG  ISP L +AIE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTDYLYHELQRRGIWTFRDDPQLERGTAISPELLTAIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YA+S+WCL EL KI+E   + G I+ PVFY VDPS                   
Sbjct: 78  VVLSPNYATSKWCLLELSKIIECMEERGTIL-PVFYEVDPSHVRHQRGSFAEAFQEHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDLFPS----DNKDQL 161
                    G+  +L  M      TS+    E   + +I + L S ++PS    D+ ++L
Sbjct: 137 FGEGNEEMEGWRVALTKMASLAGWTSKDYRYETELIREIVQALWSKVYPSLAVFDSSEKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+++ +KEI+  L   + +   +GIWG+GGIGKTT+A  +Y  IS  F+   F+ ++R 
Sbjct: 197 VGMDTKLKEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYGKISHQFDVCIFLDDVR- 255

Query: 222 ESEKVGGLANIH------------------------LNFERRRLSRMKVLIVFYDLTDLK 257
              KV  + ++                         L   +R      VL+V  ++   +
Sbjct: 256 ---KVSTIHDLDDLQKRIRSQILKEEDVQVGDVYSGLAMIKRYFCNKAVLLVLDNVDQSE 312

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           +++ L+G  D F   SR+IITTR+  +L  H    +   +E+K L+  ++L LFS  AF 
Sbjct: 313 KLENLVGEKDWFGLRSRIIITTRNRHVLVRH---GIEEPYELKGLNQYEALQLFSLEAFR 369

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           +  P   + +L    + YA G+PLAL++LGS+L   S + W S   KLK+ P+  + ++L
Sbjct: 370 KCEPEEDYAKLCKHFVTYAAGLPLALKILGSFLYKRSLDSWSSTFQKLKQTPNPTVFEIL 429

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           K+S+DGLD+ E+  FLD ACF +  D   ++  + +  FS++I +  L  +SL+TIS+N+
Sbjct: 430 KLSFDGLDEMEKKTFLDIACFRRLYDNESMIEQVSSSEFSSRIAMDVLAERSLLTISHNQ 489

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI--NLDSLK- 492
           I MHDL+QEMG EIVRQE+ K+PG RSRLW   DI+ V  +N  T +  GI  +LD L+ 
Sbjct: 490 IYMHDLIQEMGCEIVRQEN-KEPGGRSRLWLRNDIFHVFTKNTGTEVTEGIFLHLDKLEE 548

Query: 493 ------------ELYLGGCSNLK------------------RFPEISC-------NIEDL 515
                       EL L    NL+                   +P  S         + +L
Sbjct: 549 ADWNLEAFSKMCELKLLYIHNLRLSLGPKYLPNALKFLKWSWYPSKSLPPCFQPDELTEL 608

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            L  + I+ L +   +L  L  +DL++   L + +     + SL +L L GC+ L K+  
Sbjct: 609 TLVHSNIDHLWNGKKSLGNLKSIDLSDSINL-TRTPDFTGIPSLEKLILEGCISLVKIHP 667

Query: 576 EIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC 634
            I +L+ L++ N    K  + +P  +  +  L    +  C +L+ +PE    +   +R C
Sbjct: 668 SIASLKRLKFWNFRNCKSIKSLPGEV-DMEFLETFDVSGCSKLKMIPEFVGQTKRLSRLC 726

Query: 635 ---TSLKTLSNSSTLLTRS 650
              T+++ L +S   L+ S
Sbjct: 727 LGGTAVEKLPSSIEHLSES 745



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 115/238 (48%), Gaps = 39/238 (16%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR + W+  +   +     SLP  ++++ L+   + GCS LK  PE    +  +  L L 
Sbjct: 673 KRLKFWNFRNCKSI----KSLPGEVDMEFLETFDVSGCSKLKMIPEFVGQTKRLSRLCLG 728

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNCSGLKSVSSR------------------------- 552
            TA+E+LPSSI +LS  LV+LDL+     +   SR                         
Sbjct: 729 GTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSRFLKQNLIASSFGLFPRKSPHPLLPL 788

Query: 553 LCNLK---SLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
           L +LK   SLR L L+ C   E ++P +IG+L SL+ L L   +F  +P+S+  LSKL+ 
Sbjct: 789 LASLKHFSSLRTLKLNDCNLCEGEIPNDIGSLSSLKRLELRGNNFVSLPASIHLLSKLTY 848

Query: 609 LRLQNCKRLQSLPELPCGSSIH--ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
             ++NC +LQ LP LP    ++    +CTSL+   +   L   S    D  N  +C +
Sbjct: 849 FGVENCTKLQQLPALPVSDYLNVLTNNCTSLQVFPDPPDLSRLSEFFLDCSNCLSCQD 906


>gi|87162712|gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago truncatula]
          Length = 1006

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 230/648 (35%), Positives = 321/648 (49%), Gaps = 133/648 (20%)

Query: 125 MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFN 183
           M +F     E  LIE  V  +S KL+ ++ S+  D LVG+E  I ++ES L L  + +  
Sbjct: 1   MIMFYCLRDEVELIEEIVKCLSSKLNLMYQSELTD-LVGIEERIADLESLLCLDSTADVL 59

Query: 184 TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLA------------- 230
            +GIWG+GGIGKTT+A+A+Y+ +   +EGS FM NI +ESEK G +              
Sbjct: 60  VIGIWGMGGIGKTTLAAAVYNRLCFEYEGSCFMANITEESEKHGMIYLKNKILSILLKEN 119

Query: 231 NIHLN-------FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQ 283
           ++H+        + +RRL+R KVL+V  D+ DL+ ++ L+G LD F  GSR+I+TTRD Q
Sbjct: 120 DLHIGTPIGVPPYVKRRLARKKVLLVLDDINDLEHLENLVGGLDWFGSGSRIIVTTRDKQ 179

Query: 284 LLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLAL 343
           +L    G RV   +E K L  +D++ LF  NAF        ++ELS  VI YANG PLAL
Sbjct: 180 VL----GKRVNCTYEAKALQSDDAIKLFIMNAFEHGCLDMEWIELSRRVIHYANGNPLAL 235

Query: 344 QVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND 403
           +VLGS+L G S+ EWES + KLK+MPH  IQ VL++SYD LD EE+NIFL  AC  KG +
Sbjct: 236 KVLGSFLYGKSKIEWESQLQKLKKMPHAKIQNVLRLSYDRLDREEKNIFLYIACLLKGYE 295

Query: 404 QYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK----ITMHDLLQEMGGEIVRQESIKD 459
              ++  LDAC FS  IG+  L  K+L+  +       ++MHDL+QEMG EIVR+E ++D
Sbjct: 296 VQQIIALLDACGFSTIIGLRVLKDKALIIEAKGSGRSIVSMHDLIQEMGWEIVREECVED 355

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYLGG----------------- 498
           PGKRSRLW P D++QVL  NT         +N+    EL+L                   
Sbjct: 356 PGKRSRLWDPNDVHQVLTNNTGTKAIKSITLNVSKFDELHLSPQVFGRMQQLKFLKFTQH 415

Query: 499 --------------------------CSNLKRFPEISC--NIEDLDLKETAIEELPSSIG 530
                                        LK  P+  C  N+ +L L  + +E+L   I 
Sbjct: 416 YGDEKILYLPQGLESLPNDLLLFQWVSYPLKSLPQSFCAENLVELKLTWSRVEKLWDGIQ 475

Query: 531 NLSRLVDLDLT-----------------------NCSGLKSVSSRLCNLKSLRRLN---- 563
           N+  L  +DL+                        C  L +V   +  L  L RLN    
Sbjct: 476 NIQHLKKIDLSYSKYLLDLPDFSKASNLEEIELFGCKSLLNVHPSILRLNKLVRLNLFYC 535

Query: 564 -------------------LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
                              LSGC +LE       N++ L    L+     ++PSS+  L 
Sbjct: 536 KALTSLRSDTHLRSLRDLFLSGCSRLEDFSVTSDNMKDLA---LSSTAINELPSSIGSLK 592

Query: 605 KLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLT 648
            L  L L  CK L  LP    +L    +++   CT L   SN   LL+
Sbjct: 593 NLETLTLDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDA-SNLHILLS 639



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 114/215 (53%), Gaps = 31/215 (14%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           TSL +  +L SL++L+L GCS L+ F   S N++DL L  TAI ELPSSIG+L  L  L 
Sbjct: 539 TSLRSDTHLRSLRDLFLSGCSRLEDFSVTSDNMKDLALSSTAINELPSSIGSLKNLETLT 598

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK--LPEEIGNLESLEYLNL--------- 588
           L  C  L  + + + +L+SLR L + GC +L+   L   +  L SLE L L         
Sbjct: 599 LDFCKSLNKLPNEVIDLRSLRALYVHGCTQLDASNLHILLSGLASLETLKLEECRNLSEI 658

Query: 589 ---------------AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
                           E D E+ P+S+K LSKL  L ++ C+RLQ++PELP     ++A 
Sbjct: 659 PDNISLLSSLRELLLKETDIERFPASIKHLSKLEKLDVKGCRRLQNMPELPPSLKELYAT 718

Query: 633 HCTSLKTLS---NSSTLLTRSSKHWDIFNFSNCSN 664
            C+SL+T+    N+S LL   +       F NC N
Sbjct: 719 DCSSLETVMFNWNASDLLQLQAYKLHT-QFQNCVN 752


>gi|356497814|ref|XP_003517752.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 221/690 (32%), Positives = 343/690 (49%), Gaps = 92/690 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           + DVFLSFRG D R  F   L  AL R  +  F DD  L RG+EI   L  AIE S  ++
Sbjct: 14  RWDVFLSFRGTDTRDTFTMSLYHALHRRGLRVFRDDDGLERGDEIQKKLLEAIEDSAAAV 73

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG----- 123
           V+ S  YASS WCL+EL KI     K G++++PVFY VDPS        +  S G     
Sbjct: 74  VVLSPDYASSHWCLDELAKIC----KCGRLILPVFYWVDPSHVRKQKGPFEDSFGSHANK 129

Query: 124 --------WM-------GIFDIPTSESV-----LIEGNVNDISKKLSDLFPSDNKDQLVG 163
                   W        GI      E       LI+  V  + K++ +  P +     VG
Sbjct: 130 FPEESVQQWRDAMKKVGGIAGYVLDEKCEKSDKLIQHLVQILLKQMRNT-PLNVAPYTVG 188

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH-FEGSYFMQNIRDE 222
           ++  ++E++  L   S +   +G++G+GG+GKTT+A ++++++  H FE   F+ NIR +
Sbjct: 189 LDDRVEELKKLLDVKSNDVRVLGLYGMGGVGKTTLAKSLFNSLVVHNFERRSFITNIRSQ 248

Query: 223 SEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
             K  GL ++                      ++  +R +   +VL++  D+ +++Q+  
Sbjct: 249 VSKHDGLVSLQNTIHGDLSGGKKDPINDVNDGISAIKRIVQENRVLLILDDVDEVEQLKF 308

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G  + F  GSRV+ITTRD ++L   + S V   +EVKEL ++ S+ LF  +A  +  P
Sbjct: 309 LMGEREWFYKGSRVVITTRDREVLTKAK-SYVDKHYEVKELEFSPSMELFCYHAMRRKEP 367

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYL-KGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           A GFL+L+  +++   G+PLAL+V GS+L    +  EW+ AV K+K++    I  VLK+S
Sbjct: 368 AEGFLDLAKQIVEKTGGLPLALEVFGSFLFDKRTMREWKDAVEKMKQISPSGIHDVLKIS 427

Query: 381 YDGLDDEEQNIFLDTACFF-----KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS- 434
           +D LD++E+ IFLD AC F     K  D   V++ L+ C F   I ++ L  + L+ I+ 
Sbjct: 428 FDALDEQEKCIFLDIACLFVQMEMKRED---VVDILNGCNFRGDIALTVLTARCLIKITG 484

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLDSLK 492
           + K+ MHD +++MG +IV  E++ DPG RSRLW  ++I  VL   + T    GI +D +K
Sbjct: 485 DGKLWMHDQVRDMGRQIVHSENLADPGLRSRLWDRDEILIVLKSMKGTRNVQGIVVDCVK 544

Query: 493 ELYLG---------GCSNLKRFPEISCNIEDLDLK--------ETAIEELPSSIGNLSRL 535
                            N +R P     +E +  K        E   +E+     N   +
Sbjct: 545 RRMSTPRDRSADEITWENFRRKPSCKLALEYIKEKYKKYVRDREEKAKEVVLQAKNFESM 604

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
           V L L   +  +      C    L+ L    C  L  +P     LE L  ++L+E + E 
Sbjct: 605 VSLRLLQINYSRLEGQFRCLPPGLKWLQWKQC-PLRYMPSSYSPLE-LAVMDLSESNIET 662

Query: 596 I--PSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +   S+ K    L  L L NC RL + P+L
Sbjct: 663 LWSRSNNKVAEHLMVLNLSNCHRLTATPDL 692



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 30/180 (16%)

Query: 472 IYQVLNENTS---LPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEE 524
           + Q+L +NT+   LP  I +L  L+ L   GC++LKR P      C++++L L  TA+EE
Sbjct: 770 LRQLLIDNTAVTELPESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNHTALEE 829

Query: 525 LPSSIGNLSRLVDLDLTNC-----------------------SGLKSVSSRLCNLKSLRR 561
           LP S+G+L +L  L L  C                       SG+K + + + +L  LR+
Sbjct: 830 LPYSVGSLEKLEKLSLVGCKSLSVIPNSIGNLISLAQLFLDISGIKELPASIGSLSYLRK 889

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L++ GC  L+KLP  I  L S+  L L       +P  +  +  L  L ++NC+ L+ LP
Sbjct: 890 LSVGGCTSLDKLPVSIEALVSIVELQLDGTKITTLPDQIDAMQMLEKLEMKNCENLRFLP 949



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 27/167 (16%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFP-EISCNI--EDLDLKETAIEELPSSIGNLSRLVD 537
           LP+ ++ +  L++L L  C  LK  P ++SC I    L +  TA+ ELP SI +L++L +
Sbjct: 736 LPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTELPESIFHLTKLEN 795

Query: 538 LDLTNCSGLKSVSS---RLCNLK--------------------SLRRLNLSGCLKLEKLP 574
           L    C+ LK + +   +LC+L+                     L +L+L GC  L  +P
Sbjct: 796 LSANGCNSLKRLPTCIGKLCSLQELSLNHTALEELPYSVGSLEKLEKLSLVGCKSLSVIP 855

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             IGNL SL  L L     +++P+S+  LS L  L +  C  L  LP
Sbjct: 856 NSIGNLISLAQLFLDISGIKELPASIGSLSYLRKLSVGGCTSLDKLP 902



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 80/165 (48%), Gaps = 20/165 (12%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            T LP  I  L++L  L L  C  L+R P+   N++ L    +KET +  LP S G L+ L
Sbjct: 969  TELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWLQMKETTLTHLPDSFGMLTSL 1028

Query: 536  VDLD------LTNCSGL----------KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
            V LD      L   +G+          K++    CNL  L  LN  G     K+P++   
Sbjct: 1029 VKLDMERRLYLNGATGVIIPNKQEPNSKAILRSFCNLTLLEELNAHGWGMCGKIPDDFEK 1088

Query: 580  LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            L SLE L+L   +   +P+SM  LS L  L L +C+ L  LP LP
Sbjct: 1089 LSSLETLSLGHNNIFSLPASMIGLSYLKKLLLSDCRELIFLPPLP 1133



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 27/169 (15%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETA-IEELPSSIGNLSRL 535
           T+ P      SLK++ L  CS+L R  E   N+     L+L+    + ELPS +  +  L
Sbjct: 687 TATPDLTGYLSLKKIVLEECSHLIRIHESLGNLSSLVHLNLRFCYNLVELPSDVSGMKHL 746

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRL---------------------NLS--GCLKLEK 572
            DL L++C  LK++   L  +  LR+L                     NLS  GC  L++
Sbjct: 747 EDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTELPESIFHLTKLENLSANGCNSLKR 806

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           LP  IG L SL+ L+L     E++P S+  L KL  L L  CK L  +P
Sbjct: 807 LPTCIGKLCSLQELSLNHTALEELPYSVGSLEKLEKLSLVGCKSLSVIP 855



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 9/139 (6%)

Query: 489 DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE------LPSSIGNLSRLVDLDLTN 542
           + L  L L  C  L   P+++     L LK+  +EE      +  S+GNLS LV L+L  
Sbjct: 673 EHLMVLNLSNCHRLTATPDLTGY---LSLKKIVLEECSHLIRIHESLGNLSSLVHLNLRF 729

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C  L  + S +  +K L  L LS C KL+ LP+++  +  L  L +      ++P S+  
Sbjct: 730 CYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTELPESIFH 789

Query: 603 LSKLSDLRLQNCKRLQSLP 621
           L+KL +L    C  L+ LP
Sbjct: 790 LTKLENLSANGCNSLKRLP 808



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 28/137 (20%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFP-EISC--NIEDLDLKETAIEELPSSIGNLSRL 535
            T+LP  I+ +  L++L +  C NL+  P    C   +  LDL ET I ELP SIG L  L
Sbjct: 922  TTLPDQIDAMQMLEKLEMKNCENLRFLPVSFGCLSALTSLDLHETNITELPESIGMLENL 981

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            + L L  C                         +L++LP+  GNL+SL++L + E     
Sbjct: 982  IRLRLDMCK------------------------QLQRLPDSFGNLKSLQWLQMKETTLTH 1017

Query: 596  IPSSMKQLSKLSDLRLQ 612
            +P S   L+ L  L ++
Sbjct: 1018 LPDSFGMLTSLVKLDME 1034



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 5/115 (4%)

Query: 515 LDLKETAIEELPSSIGN--LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
           +DL E+ IE L S   N     L+ L+L+NC  L + +  L    SL+++ L  C  L +
Sbjct: 653 MDLSESNIETLWSRSNNKVAEHLMVLNLSNCHRL-TATPDLTGYLSLKKIVLEECSHLIR 711

Query: 573 LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELPC 625
           + E +GNL SL +LNL    +  ++PS +  +  L DL L +C +L++LP +L C
Sbjct: 712 IHESLGNLSSLVHLNLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSC 766


>gi|297815586|ref|XP_002875676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321514|gb|EFH51935.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1058

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 233/732 (31%), Positives = 362/732 (49%), Gaps = 119/732 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR   +SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 52  KHDVFPSFHGADVRRTLLSHIMESFRRKGIDTFIDNNIERSKPIGPELKEAIKGSKIAIV 111

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------YCPSL 122
           + S+ YASS WCL+EL +I++ +   GQIV+ +FY VDP+D               C   
Sbjct: 112 LLSKNYASSSWCLDELAEIMKCREVLGQIVMTIFYEVDPTDIKKQTGDFGKAFRKTCKGK 171

Query: 123 G------WM-GIFDIP----------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+           ++E+ +IE    D+S  L+   PS + D  VG+ 
Sbjct: 172 TKEHIERWRKALKDVAIIAGEHSRNWSNEAEMIEKISIDVSNMLNLSIPSSDFDDFVGIT 231

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD---- 221
           + ++ +E  L     E   +GIWG  GIGKTTIA+ ++   SS F  +  M +IR+    
Sbjct: 232 AHMERMEKYLSLDLDEVRMIGIWGPPGIGKTTIATCMFDRFSSRFPLAAIMADIRECYPR 291

Query: 222 ------------ESEKVGGLANI------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
                       + + +  + N       HL   + RL   KVL+V  ++    Q+D L 
Sbjct: 292 LCLDERNAQLKLQKQMLSLIFNQKDIMISHLGVAQERLKDKKVLLVLDEVDHSGQLDALA 351

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
             +  F PGSR+IITT D+ +LK  RG  + HV++V   S +++  +F  NAFGQ  P  
Sbjct: 352 KEIQWFGPGSRIIITTEDLGVLK-ARG--INHVYKVDFPSNDEAFQIFCMNAFGQKQPYE 408

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF +L+  V+  A  +PL L+VLGS L+GMS+ +WE A+ +LK      I  +++ SYD 
Sbjct: 409 GFRKLALEVMALAGELPLGLKVLGSALRGMSKPDWERALPRLKTSLDGKIGSIIQFSYDA 468

Query: 384 LDDEEQNIFLDTACFF----KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           L DE++ +FL  AC F        + L+  FLD      + G+  L  KSL++I    I 
Sbjct: 469 LCDEDKYLFLYIACLFIYESTTKVKELLGKFLD-----VRQGLYVLAQKSLISIDGETIK 523

Query: 440 MHDLLQEMGGEIVRQESIKDP-GKRSRLWHPEDIYQVLNENTSLP---TGINLDSLKELY 495
           MH LL++ G E  R++ ++    KR  L    DI +VL ++T+      GINLD      
Sbjct: 524 MHTLLEQFGRETSRKQFVRHGFTKRQLLVGERDICEVLEDDTTDSRRFIGINLD------ 577

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC- 554
                       +S   E+L++ E A+E +        R+ D +      L+SV   L  
Sbjct: 578 ------------LSKTEEELNISEKALERMHD--FQFVRIKDKNRAQTERLQSVLEGLIY 623

Query: 555 NLKSLRRLNLSG----CL-----------------KLEKLPEEIGNLESLEYLNL-AEKD 592
           + + +R L+ S     CL                 KL+KL E    L++L++++L   +D
Sbjct: 624 HSQKIRLLDWSYFQDICLPSTFNPEFLVELTLKYSKLQKLWEGTKKLKNLKWMDLGGSED 683

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
            +++P  +   + L ++ L+NC  L  LP     SSI       L  L + S+L   + +
Sbjct: 684 LKELP-DLSTATNLEEVNLRNCSSLVELP-----SSIGNATKLELLNLDDCSSLNATNLR 737

Query: 653 HWDIFNFSNCSN 664
            +D+   ++CSN
Sbjct: 738 EFDL---TDCSN 746



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 79/140 (56%), Gaps = 14/140 (10%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK + LGG  +LK  P++S   N+E+++L+  +++ ELPSSIGN ++L  L+L +CS
Sbjct: 670 LKNLKWMDLGGSEDLKELPDLSTATNLEEVNLRNCSSLVELPSSIGNATKLELLNLDDCS 729

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
            L        N  +LR  +L+ C  L +LP  IG+   LE L L    +  K+ SS+   
Sbjct: 730 SL--------NATNLREFDLTDCSNLVELP-SIGDAIKLERLCLDNCSNLVKLFSSINA- 779

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           + L    L +C  L  LP++
Sbjct: 780 TNLHKFSLSDCSSLVELPDI 799


>gi|357499487|ref|XP_003620032.1| Resistance-gene protein [Medicago truncatula]
 gi|355495047|gb|AES76250.1| Resistance-gene protein [Medicago truncatula]
          Length = 533

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 200/523 (38%), Positives = 290/523 (55%), Gaps = 64/523 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D RH F  +L  AL  + I TFIDD  L RG+EI+PSL +AIE S+I I 
Sbjct: 11  YQVFLSFRGADTRHGFTGNLYKALTDKGIYTFIDDNDLQRGDEITPSLKNAIEKSRIFIP 70

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FSE YASS +CL+ELV I    +  G +V+PVF  VDP+D       Y  +L       
Sbjct: 71  VFSENYASSSFCLDELVHITHCYDTKGCLVLPVFIGVDPTDVRHHTGRYGEALAVHKKKF 130

Query: 124 ------------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                       W        +          E   I   V DIS ++S   P D     
Sbjct: 131 QNDKDNTERLQQWKEALSQAANLSGQHYKHGYEYEFIGKIVEDISNRISRE-PLDVAKYP 189

Query: 162 VGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           VG++S ++ ++  L   S  E + VG++G GGIGK+T+A AIY+ I+  FE   F++N+R
Sbjct: 190 VGLQSRVQHVKGHLDEKSDDEVHMVGLYGTGGIGKSTLAKAIYNFIADQFEVLCFLENVR 249

Query: 221 DESE--------------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
             S                     K+GG++   +   ++RL R K+L++  D+  L Q++
Sbjct: 250 VNSTSDNLKHLQEKLLLKTVRLDIKLGGVSQ-GIPIIKQRLCRKKILLILDDVDKLDQLE 308

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G LD F PGSRVIITTR+  LLK H G    H   V+ L+  ++L L    AF +N 
Sbjct: 309 ALAGGLDWFGPGSRVIITTRNKHLLKIH-GIESTHA--VEGLNATEALELLRWMAFKENV 365

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P++   ++ N  + YA+G+PLA+ ++GS L G S ++  S ++  + +P+ +IQ++LKVS
Sbjct: 366 PSS-HEDILNRALTYASGLPLAIVIIGSNLVGRSVQDSMSTLDGYEEIPNKEIQRILKVS 424

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI-GISRLVGKSLVT--ISNNK 437
           YD L+ EEQ++FLD AC FKG     V   L A      +  ++ L  KSL+     ++ 
Sbjct: 425 YDSLEKEEQSVFLDIACCFKGCKWPEVKEILHAHYGHCIVHHVAVLAEKSLMDHLKYDSY 484

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           +T+HDL+++MG E+VRQES  +PG+RSRLW   DI  VL +NT
Sbjct: 485 VTLHDLIEDMGKEVVRQESPDEPGERSRLWFERDIVHVLKKNT 527


>gi|332330345|gb|AEE43931.1| TIR-NBS-LRR resistance protein muRdr1G [Rosa multiflora]
          Length = 1141

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 230/680 (33%), Positives = 344/680 (50%), Gaps = 84/680 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F   L   L R+ I TF DD +L RG  ISP L + IE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTGFLYHELQRQGIRTFRDDPQLERGTVISPELLTVIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  +ASS WCL EL KILE   + G+I+ P+FY VDPS                   
Sbjct: 78  VVLSPNFASSTWCLLELSKILECMEERGRIL-PIFYEVDPSHVRHQRGSFAEAFREHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDLFPS----DNKDQL 161
                    G+  +L  +      TS+    E   + +I + L S + PS     + ++L
Sbjct: 137 FGVGNKKVEGWRDALTKVASLAGWTSKDYRYEKELIREIVQALWSKVHPSLTVFGSSEKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+  + +EI+  L   +++   +GIWG+GG+GKTT+A  +Y  IS  FE   F+ N+R+
Sbjct: 197 VGMHKL-EEIDVLLDIEASDVRFIGIWGMGGLGKTTLARLVYEKISHQFEVCVFLTNVRE 255

Query: 222 ES------------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            S                  E+   + N++  +   +R      V++V  D+   +Q++ 
Sbjct: 256 VSATHGLVYLQKQILSHILKEENAQVWNVYSGITMIKRCFCNKAVILVLDDVDQSEQLEH 315

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  D F   SR+I TTR+ ++L  H    V   +E+K L+  ++L LFS  AF +  P
Sbjct: 316 LAGEKDWFGLRSRIIFTTRNQRVLVTHG---VEKPYELKGLNNAEALQLFSWKAFRKCEP 372

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              + EL    + +A G+PLAL+ LGS+L   S + W SA+ KL+  P   +  +LKVSY
Sbjct: 373 EEDYAELCKSFVMHAGGLPLALKTLGSFLYKRSPDAWNSALAKLRNTPDKTVFDMLKVSY 432

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITM 440
           DGLD+ E+ IFLD ACF        ++  L +      I I  LV +SL+TIS NN+I M
Sbjct: 433 DGLDEMEKKIFLDIACFSSQCQAKFIIELLYSYDVCIGIAIEVLVERSLLTISSNNEIGM 492

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI--NLDSLKELYL 496
           HDL++EMG EIVRQ+S ++PG  SRLW   DI+ V  +NT      GI  +L  L+E   
Sbjct: 493 HDLIREMGCEIVRQQSPEEPGGCSRLWLRNDIFHVFTKNTGTEAIEGIFLHLHKLEE--- 549

Query: 497 GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK--------- 547
               N + F ++ CN++ L +    +   P  + +  R++         L          
Sbjct: 550 -ADWNPEAFSKM-CNLKLLYIHNLRLSLGPKFLPDALRILKWSWYPSKSLPPGFQPDELS 607

Query: 548 ---SVSSRLCN--LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMK 601
              S    L N  L  L+ + LS  + L + P+  G + +LE L L    +  KI  S+ 
Sbjct: 608 FVHSNIDHLWNGILGHLKSIVLSYSINLIRTPDFTG-IPNLEKLVLEGCTNLVKIHPSIA 666

Query: 602 QLSKLSDLRLQNCKRLQSLP 621
            L +L     +NCK +++LP
Sbjct: 667 LLKRLKIWNFRNCKSIKTLP 686



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 111/225 (49%), Gaps = 39/225 (17%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR ++W+  +   +     +LP+ +N++ L+   + GCS LK  PE    +  +  L L 
Sbjct: 669 KRLKIWNFRNCKSI----KTLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKRLSKLCLG 724

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNC----------------------------SGLKSV 549
            TA+E+LPSSI +LS  LV LDL+                                L  V
Sbjct: 725 GTAVEKLPSSIEHLSESLVGLDLSGIVIREQPYSLFLKQNVIASSLGLFPRKSHHPLIPV 784

Query: 550 SSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            + L +  SL+ LNL+ C   E ++P +IG+L SLE L L   +F  +P+S+  L +L  
Sbjct: 785 LASLKHFSSLKELNLNDCNLCEGEIPNDIGSLSSLECLELGGNNFVSLPASIHLLCRLGS 844

Query: 609 LRLQNCKRLQSLPELPCGSSIHAR--HCTSLKTLSNSSTLLTRSS 651
           + ++NCKRLQ LPELP   S+     +CTSL+        L R S
Sbjct: 845 INVENCKRLQQLPELPVSGSLRVTTVNCTSLQVFPELPPDLCRLS 889


>gi|399920201|gb|AFP55548.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1115

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 248/717 (34%), Positives = 369/717 (51%), Gaps = 88/717 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F  +L   L R  I TF DD +L RG  ISP L +AIE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTDYLYHELQRRGIRTFRDDPQLERGTAISPELLTAIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YASS WCL EL KILE   + G I+ P+FY VDPS                   
Sbjct: 78  VVLSPNYASSTWCLLELSKILECMEERGTIL-PIFYEVDPSHVRHQRGSFAEAFQEHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDLFPS----DNKDQL 161
                    G+  +L  +      TS+    E   + +I + L S + PS     + ++L
Sbjct: 137 FGVGNKKVEGWRDALTKVASLAGWTSKDYRYETQLIREIVQALWSKVHPSLTVFGSSEKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
            G+++ ++EI+  L   + +   +GIWG+GG+GKTT+A  +Y NIS  FE   F+ N+R+
Sbjct: 197 FGMDTKLEEIDVLLDKEANDVRFIGIWGMGGMGKTTLARLVYENISHQFEVCIFLANVRE 256

Query: 222 ESEKVGGL-------------ANIHLNFERRRLSRMK-------VLIVFYDLTDLKQIDL 261
            S   G +              N+ +      ++R+K       VL+V  D+   +Q++ 
Sbjct: 257 VSATHGLVHLQKQILSQIFKEENVQVWDVYSGITRIKRCFWNKEVLLVLDDVDQSEQLEN 316

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G  D F   SR+IITTR+  +L  H    +   +E+K L  +++L LFS  AF    P
Sbjct: 317 LVGEKDWFGLRSRIIITTRNRHVLVTHG---IEKPYELKGLKVDEALQLFSWKAFRNYEP 373

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              F E S   ++YA G+PLAL++LGS+L   S + W S+  KLK+ P+  + ++LKVS+
Sbjct: 374 EEDFAEESKSFVRYAGGLPLALKILGSFLYKRSLDSWSSSFQKLKQTPNPTVFEILKVSF 433

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITM 440
           DGLDD E+ IFLD ACF        ++  + +  F + I I  LV KSL+TIS+ N I M
Sbjct: 434 DGLDDMEKKIFLDIACFRWLYHNESMIEQVYSSEFCSHIAIDVLVEKSLLTISSYNWIYM 493

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLKELYLGG 498
           HDL+QEMG EIVR+E+ ++PG RSRLW  +DI+ V  +NT      GI+L  L EL    
Sbjct: 494 HDLIQEMGCEIVRKEN-EEPGGRSRLWLRKDIFHVFTKNTGTEAIEGISLH-LYELEEAD 551

Query: 499 CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL---------------DLTNC 543
             NL+ F ++ C ++ L +    +   P  I N  R +                 +LT  
Sbjct: 552 W-NLEAFSKM-CKLKLLYIHNLRLSLGPKFIPNALRFLSWSWYPSKSLPPCFQPDELTEL 609

Query: 544 SGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
           S + S    L N     ++L+ +NLS  + L + P+  G + +LE L L    +  K+  
Sbjct: 610 SLVHSNIDHLWNGIKYSRNLKSINLSYSINLTRTPDFTG-IPNLEKLVLEGCTNLVKVHP 668

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
           S+  L +L     +NCK ++SLP    +    +     C+ LK +      + R SK
Sbjct: 669 SIALLKRLKIWNFRNCKSIKSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMKRLSK 725



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 39/220 (17%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLK 518
           KR ++W+  +   +     SLP+ +N++ L+   + GCS LK  PE    ++    L L 
Sbjct: 674 KRLKIWNFRNCKSI----KSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMKRLSKLSLG 729

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNCSGLKSVSSR------------------------- 552
            TAIE+LPSSI +LS  LV+LDL+     +   SR                         
Sbjct: 730 GTAIEKLPSSIEHLSESLVELDLSGLVIREQPYSRFLKQNLIASSFGLFPRKRPHPLVPL 789

Query: 553 LCNLK---SLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
           L +LK   SL  LNL+ C   E ++P +IG+L SLE L L   +F  + +S+  LSKL  
Sbjct: 790 LASLKHFSSLTTLNLNDCNLCEGEIPNDIGSLSSLESLELRGNNFVSLSASIHLLSKLKH 849

Query: 609 LRLQNCKRLQSLPELPCGSSIH--ARHCTSLKTLSNSSTL 646
           + ++NC+RLQ LPELP    +     +CTSL+   +   L
Sbjct: 850 INVENCRRLQQLPELPASDYLRVVTDNCTSLQMFPDPQDL 889


>gi|147782877|emb|CAN67859.1| hypothetical protein VITISV_009855 [Vitis vinifera]
          Length = 1383

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 242/730 (33%), Positives = 354/730 (48%), Gaps = 177/730 (24%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DDK L +G +I+  L  AIE       
Sbjct: 20  YDVFLSFRGSDTRRNFTDHLYTTLTASGIQTFRDDKELEKGGDIASDLLRAIE------- 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
                   SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 73  -------ESRWCLNELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 125

Query: 125 -------MGIFDIPTSESVLIEG-NVND-----ISKKLSDLF-------PSDNKDQLVGV 164
                  +  + I   E+  + G +VND     + K++ D         P      +VG+
Sbjct: 126 NQEKMEMIQKWRIALREAANLSGCHVNDQYETQVVKEIVDTIIRRLNHHPLSVGRSIVGI 185

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
              +++++S + +     + VGI+GIGG+GKTTIA AIY+ IS  ++G  F++NI++ S+
Sbjct: 186 GVHLEKLKSLMNTKLNMVSVVGIYGIGGVGKTTIAKAIYNEISDQYDGRSFLRNIKERSK 245

Query: 225 KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQL 284
                                              + L    D F   S +IIT+RD  +
Sbjct: 246 -----------------------------------EYLAEEKDWFQAKSTIIITSRDKHV 270

Query: 285 LKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQ 344
           L  +    V   +EV +L+  +++ LFS  AF QNHP   +  LS  +I YANG+PLAL+
Sbjct: 271 LARYG---VDIPYEVSKLNKEEAIELFSLWAFKQNHPKKVYKNLSYNIIDYANGLPLALK 327

Query: 345 VLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQ 404
           VLG+ L G    EWESA+ KLK +PHM+I  VL++S+DGLDD ++ +FLD ACFFKG+D+
Sbjct: 328 VLGASLFGKKISEWESALCKLKIIPHMEIHNVLRISFDGLDDIDKGMFLDVACFFKGDDK 387

Query: 405 YLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRS 464
             V   L      A+  I+ L  + L+TIS N + MHDL+Q MG E++RQE  +DPG+RS
Sbjct: 388 DFVSRILGP---HAEHVITTLAYRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRS 444

Query: 465 RLWHPEDIYQVL--NENTSLPTGINLD------SLKEL---------------------- 494
           RLW   + Y VL  N  T    G+ LD      S KE+                      
Sbjct: 445 RLW-DSNAYHVLIGNTGTRAIEGLFLDRWLTTKSFKEMNRLRLLKIHNPRRKLFLEDHLP 503

Query: 495 -------YLGGCSNLKRFPEISC-------NIEDLDLKETAIEEL--PSSIGNLSRLVDL 538
                  Y     +  R+P  S        N+ +L L+ + I++L   S + +  R++DL
Sbjct: 504 RDFEFSSYEYTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGSKLHDKLRVIDL 563

Query: 539 D-------------------LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK------- 572
                               LT    ++ + S + +L  L+ L L  CLKL +       
Sbjct: 564 SYSVHLIRIPDFSSVPNLEILTLEGSIRDLPSSITHLNGLQTLLLQECLKLHQIPNHICH 623

Query: 573 ------------------LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
                             +P +I +L SL+ LNL    F  IP+++ QLS+L  L L +C
Sbjct: 624 LSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTINQLSRLEVLNLSHC 683

Query: 615 KRLQSLPELP 624
             L+ +PELP
Sbjct: 684 NNLEQIPELP 693



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 95/202 (47%), Gaps = 51/202 (25%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            TSLP+GI N  SL  L   GCS LK FP+I  ++E+L    L  TAI+E+PSSI  L  L
Sbjct: 963  TSLPSGICNFKSLATLCCSGCSQLKSFPDILQDMENLRNLYLDRTAIKEIPSSIERLRGL 1022

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE-------------- 581
              L L NC  L ++   +CNL SLR+L++  C   +KLP+ +G L+              
Sbjct: 1023 QHLTLINCINLVNLPDSICNLTSLRKLSVQRCPNFKKLPDNLGRLQSLLHLRVGHLDSMN 1082

Query: 582  ---------------------------------SLEYLNLAEKDFEKIPSSMKQLSKLSD 608
                                             SLE L LA   F +IP  + QL  L+ 
Sbjct: 1083 FQLPSLSGLCSLGTLMLHACNIREIPSEIFSLSSLERLCLAGNHFSRIPDGISQLYNLTF 1142

Query: 609  LRLQNCKRLQSLPELPCGSSIH 630
            L L +CK LQ +PELP G   H
Sbjct: 1143 LDLSHCKMLQHIPELPSGVRRH 1164



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 14/152 (9%)

Query: 516  DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            D+ E  I E P  +  L       L  C  L S+ S +CN KSL  L  SGC +L+  P+
Sbjct: 938  DMNEVPIIENPLELDRLC------LLGCKNLTSLPSGICNFKSLATLCCSGCSQLKSFPD 991

Query: 576  EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHA 631
             + ++E+L  L L     ++IPSS+++L  L  L L NC  L +LP+  C       +  
Sbjct: 992  ILQDMENLRNLYLDRTAIKEIPSSIERLRGLQHLTLINCINLVNLPDSICNLTSLRKLSV 1051

Query: 632  RHCTSLKTLSNS----STLLTRSSKHWDIFNF 659
            + C + K L ++     +LL     H D  NF
Sbjct: 1052 QRCPNFKKLPDNLGRLQSLLHLRVGHLDSMNF 1083


>gi|15237516|ref|NP_198907.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177970|dbj|BAB11353.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007232|gb|AED94615.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1104

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 225/698 (32%), Positives = 347/698 (49%), Gaps = 99/698 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F+SHL+     + I  F D ++ RG+ I P L  AI  S++SIV
Sbjct: 11  RYHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKDQEIERGHTIGPELIQAIRESRVSIV 70

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GYCPSL 122
           + SE YASS WCL+ELV+IL+ K   GQ+V+ +FY VDPSD               C   
Sbjct: 71  VLSEKYASSCWCLDELVEILKCKEASGQVVMTIFYKVDPSDVRKQRGDFGSTFKKTCEGK 130

Query: 123 GWM-------GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
            W+        +  I T          +E+ LI+    D+S KL +L PS + + +VG+E
Sbjct: 131 TWIVKQRWIKALEYIATVAGEHSLSWANEAELIQKIATDVSNKL-NLTPSRDFEGMVGLE 189

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI--RDES 223
           + + +++S L   S +   +GIWG  GIGKTTIA A+++ +S+ F  S FM  I   D  
Sbjct: 190 AHLTKLDSFLCLESDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFMGTIDVNDYD 249

Query: 224 EKV----GGLANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFV 270
            K+      L+ I         HL      L   +VLIV  D+ DL+Q+++L      F 
Sbjct: 250 SKLCLQNKLLSKILNQKDMKIHHLGAIEEWLHNQRVLIVLDDVDDLEQLEVLAKESSWFG 309

Query: 271 PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSN 330
            GSR+I++  D ++LK H    +  +++V   S  ++L +   +AF QN P  GF E++ 
Sbjct: 310 HGSRIIVSLNDRKILKAHG---INDIYDVDFPSEEEALEILCLSAFKQNSPQDGFEEVAK 366

Query: 331 IVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQN 390
            V++    +PL L+V+GS   G SE+EW   +  ++      I+ VL+V YD L +  Q+
Sbjct: 367 RVVELCGKLPLGLRVVGSSFYGESEDEWRIQLYGIETNLDRKIENVLRVGYDKLSERHQS 426

Query: 391 IFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGE 450
           +FL  ACFF       V   L       + G+  L  KSLV+ +N  ITMH LLQ++G +
Sbjct: 427 LFLHIACFFNHKSVDYVTTMLADSTLDVENGLKTLAAKSLVS-TNGWITMHCLLQQLGRQ 485

Query: 451 IVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLK---------------- 492
           +V Q+   DPGKR  L   ++I  VL   T   +  GI+ D  K                
Sbjct: 486 VVVQQG--DPGKRQFLVEAKEIRDVLANETGTESVIGISFDISKIETLSISKRAFNRMRN 543

Query: 493 ----ELYLGGCS---NLKRFPEI-------------------SCNIEDLDLKETAIEELP 526
                 Y G  S   +++  P +                    C +E L +  + +E+L 
Sbjct: 544 LKFLNFYNGSVSLLEDMEYLPRLRLLYWGSYPRKSLPLTFKPECLVE-LYMGFSKLEKLW 602

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
             I  L+ L  ++L   S LK + + L    +L+ L L+GC  L ++P  I NL+ LE L
Sbjct: 603 GGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLKTLTLTGCESLVEIPSSIWNLQKLEML 661

Query: 587 NLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             +     + IP+++  L+ L ++ + NC RL+S P++
Sbjct: 662 YASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRSFPDI 698



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 30/164 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLDL 540
           +PT INL SL+E+ +  CS L+ FP+IS NI+ L +  T I+E P+SI G+  RL  L +
Sbjct: 672 IPTNINLASLEEVNMSNCSRLRSFPDISSNIKRLYVAGTMIKEFPASIVGHWCRLDFLQI 731

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +              +SL+RL          +P      ES+ +L+L   D + IP  +
Sbjct: 732 GS--------------RSLKRLT--------HVP------ESVTHLDLRNSDIKMIPDCV 763

Query: 601 KQLSKLSDLRLQNCKRLQSLP-ELPCGSSIHARHCTSLKTLSNS 643
             L  L  L ++NC +L S+    P   ++ A HC SLK++  S
Sbjct: 764 IGLPHLVSLLVENCTKLVSIQGHSPSLVTLFADHCISLKSVCCS 807



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 9/130 (6%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVD 537
           SLP     + L ELY+G     K +  I    N++ ++L  ++ ++E+P+ +   + L  
Sbjct: 578 SLPLTFKPECLVELYMGFSKLEKLWGGIQPLTNLKKINLGYSSNLKEIPN-LSKATNLKT 636

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDF 593
           L LT C  L  + S + NL+ L  L  SGC+KL+ +P  I NL SLE +N++     + F
Sbjct: 637 LTLTGCESLVEIPSSIWNLQKLEMLYASGCIKLQVIPTNI-NLASLEEVNMSNCSRLRSF 695

Query: 594 EKIPSSMKQL 603
             I S++K+L
Sbjct: 696 PDISSNIKRL 705


>gi|37574595|gb|AAQ93074.1| putative TIR-NBS type R protein 4 [Malus baccata]
          Length = 726

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 205/550 (37%), Positives = 302/550 (54%), Gaps = 59/550 (10%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VF+SFRG+D R NF  HL+ AL +  I  FIDD+ L RG +I+  L  AI+GS+ISI+
Sbjct: 125 YEVFISFRGEDTRKNFTGHLHEALTKAGINAFIDDEELRRGEDITTELVQAIQGSRISII 184

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS  YA S WCL ELVKI+E +   GQ+V+P+FY VDPS+       +  S        
Sbjct: 185 VFSRRYADSSWCLEELVKIMECRRTLGQLVLPIFYDVDPSNVRKLTGSFAQSFLKHTDEK 244

Query: 123 ----------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                           GW     +   E+  I    N ++ KL++ + +    Q VG+++
Sbjct: 245 KVERWRAALTEASNLSGWDLKNTLDRHEAKFIRMITNQVTVKLNNRYFNVAPYQ-VGIDT 303

Query: 167 IIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES-- 223
            +  I + L +  S +   +GI G+GGIGKTTI  AIY+     FEG  F++ +R++   
Sbjct: 304 RVLNISNYLGIGDSDDVRVIGISGMGGIGKTTIVKAIYNEFYERFEGKSFLEKVREKKLV 363

Query: 224 --------------EKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
                          KV  +A +       R  R++VL++  D+ D+KQ+  L+G    F
Sbjct: 364 KLQKQLLFDILQTKTKVSSVA-VGTALVGERFRRLRVLVIVDDVDDVKQLRELVGNCHSF 422

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
            PGSR+IITTR+ ++LK      V  ++    +   ++L L S +AF  +   + +L L+
Sbjct: 423 GPGSRIIITTRNERVLKEFA---VDEIYRENGMDQEEALELLSWHAFKSSWCPSQYLVLT 479

Query: 330 NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE-E 388
             V+ Y  G+PLAL+VLGS +   S  EW S +++LK +P  +IQ  LK+SYDGL+D  +
Sbjct: 480 REVVNYCGGLPLALEVLGSTIFKRSVNEWRSILDELKMIPRGEIQAQLKISYDGLNDHYK 539

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEM 447
           + IFLD A FF G D+  VM  LD C F A  GI  L+ + LVTI   NKI MHDLL++M
Sbjct: 540 RQIFLDIAFFFIGMDKNDVMQILDGCGFYATTGIEVLLDRCLVTIGRKNKIMMHDLLRDM 599

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYLG--GCSN 501
           G +IV  E+   P +RSRLWHP+D++ VL + +         +NL SL+E         N
Sbjct: 600 GRDIVHAENPGFPRERSRLWHPKDVHDVLIDKSGTEKIEGLALNLPSLEETSFSTDAFRN 659

Query: 502 LKRFPEISCN 511
           +KR   +  N
Sbjct: 660 MKRLRLLQLN 669


>gi|37574599|gb|AAQ93076.1| putative TIR-NBS type R protein 4 [Malus baccata]
          Length = 726

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 205/550 (37%), Positives = 301/550 (54%), Gaps = 59/550 (10%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VF+SFRG+D R NF  HL+ AL +  I  FIDD+ L RG +I+  L  AI+GS+ISI+
Sbjct: 125 YEVFISFRGEDTRKNFTGHLHEALTKAGINAFIDDEELRRGEDITTELVQAIQGSRISII 184

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------- 122
           +FS  YA S WCL ELVKI+E +   GQ+V+P+FY VDPS+       +  S        
Sbjct: 185 VFSRRYADSSWCLEELVKIMECRRTLGQLVLPIFYDVDPSNVRKLTGSFAQSFLKHTDEK 244

Query: 123 ----------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                           GW     +   E+  I    N ++ KL++ + +    Q VG+++
Sbjct: 245 KVERWRAALTEASNLSGWDLKNTLDRHEAKFIRMITNQVTVKLNNRYFNVAPYQ-VGIDT 303

Query: 167 IIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES-- 223
            +  I + L +  S +   +GI G GGIGKTTI  AIY+     FEG  F++ +R++   
Sbjct: 304 RVLNISNYLGIGDSDDVRVIGISGSGGIGKTTIVKAIYNEFYERFEGKSFLEKVREKKLV 363

Query: 224 --------------EKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
                          KV  +A +       R  R++VL++  D+ D+KQ+  L+G    F
Sbjct: 364 KLQKQLLFDILQTKTKVSSVA-VGTALVGERFRRLRVLVIVDDVDDVKQLRELVGNCHSF 422

Query: 270 VPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELS 329
            PGSR+IITTR+ ++LK      V  ++    +   ++L L S +AF  +   + +L L+
Sbjct: 423 GPGSRIIITTRNERVLKEFA---VDEIYRENGMDQEEALELLSWHAFKSSWCPSQYLVLT 479

Query: 330 NIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE-E 388
             V+ Y  G+PLAL+VLGS +   S  EW S +++LK +P  +IQ  LK+SYDGL+D  +
Sbjct: 480 REVVNYCGGLPLALEVLGSTIFKRSVNEWRSILDELKMIPRGEIQAQLKISYDGLNDHYK 539

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEM 447
           + IFLD A FF G D+  VM  LD C F A  GI  L+ + LVTI   NKI MHDLL++M
Sbjct: 540 RQIFLDIAFFFIGMDKNDVMQILDGCGFYATTGIEVLLDRCLVTIGRKNKIMMHDLLRDM 599

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDSLKELYLG--GCSN 501
           G +IV  E+   P +RSRLWHP+D++ VL + +         +NL SL+E         N
Sbjct: 600 GRDIVHAENPGFPRERSRLWHPKDVHDVLIDKSGTEKIEGLALNLPSLEETSFSTDAFRN 659

Query: 502 LKRFPEISCN 511
           +KR   +  N
Sbjct: 660 MKRLRLLQLN 669


>gi|20260632|gb|AAM13214.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 672

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 232/688 (33%), Positives = 350/688 (50%), Gaps = 102/688 (14%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VF SF G D+R  F+SHL        I  F D  + R   I+P+L  AI  S+ISIV+ 
Sbjct: 1   NVFPSFHGGDIRKTFLSHLRKQFNSNGITMFDDQGIERSQTIAPALIQAIRESRISIVVL 60

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------------- 117
           S+ YASS WCLNELV+IL+ K+    +V+P+FY VDPSD                     
Sbjct: 61  SKNYASSSWCLNELVEILKCKD----VVMPIFYEVDPSDVRKQTGDFGKAFKNSCKSKTK 116

Query: 118 -----YCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                +  +L ++G      S     E+ +IE    D+S KL +  PS + D  VG+E  
Sbjct: 117 EERQRWIQALIFVGNIAGEHSLKWENEADMIEKIAKDVSDKL-NATPSKDFDAFVGLEFH 175

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR------- 220
           I+E+ S L     +   VGI G  GIGKTTIA A+ S +SS+F+ S FM+N+R       
Sbjct: 176 IRELSSLLYLDYEQVRIVGICGPAGIGKTTIARALQSLLSSNFQRSCFMENVRGSLNIGL 235

Query: 221 -------DESEKV-------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
                  D  E++        G+   HL   R RL   KVLI+  D+ DL  +  L  + 
Sbjct: 236 DEYGLKLDLQERLLSKIMNQKGMRIEHLGTIRDRLHDQKVLIILDDVNDL-DLYALADQT 294

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
             F PGSR+I+TT D +LL+ H    + +V+ V   S  ++L +F R AF Q+      L
Sbjct: 295 TWFGPGSRIIVTTEDNELLQKHD---INNVYHVDFPSRKEALEIFCRCAFRQSSAPDTIL 351

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
           +L+  V +    +PL L V+GS L G +E+EWE  + +L+     D +  L+V YD L +
Sbjct: 352 KLAERVTELCGNLPLGLCVIGSSLHGKTEDEWEILIRRLEISLDRDNEAQLRVGYDSLHE 411

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQ 445
            EQ +FL  A FF   D+ LVM  L       + G+  L  KSL+ IS N KI MH+LLQ
Sbjct: 412 NEQALFLSIAVFFNYKDRQLVMAMLLDSNLDVEYGLRTLANKSLIHISRNEKIVMHNLLQ 471

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS--LPTGINLD--SLKELYLGGCSN 501
            +G + ++++   +P KR  L   ++I  VL  +T   + +GI+ D   + E++L   + 
Sbjct: 472 HVGRQAIQRQ---EPWKRHILIDADEICNVLENDTDARIVSGISFDISRIGEVFLSERA- 527

Query: 502 LKRFPEISCNIEDLDLKETAIEE-----LPSSIG----------------------NLSR 534
            KR     CN++ L + +T  +E     +P ++                       NL  
Sbjct: 528 FKRL----CNLQFLRVFKTGYDEKNRVRIPENMEFPPRLRLLQWEAYPRRSLSLKLNLEY 583

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDF 593
           LV+LD+   S L+ +      L +L++++LS    L+KLP ++ N  +LE L+L A ++ 
Sbjct: 584 LVELDMEG-SLLEKLWDGTQPLANLKKMSLSSSWYLKKLP-DLSNATNLEELDLRACQNL 641

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            ++PSS   L KL  L +  C+RL+ +P
Sbjct: 642 VELPSSFSYLHKLKYLNMMGCRRLKEVP 669


>gi|357499359|ref|XP_003619968.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494983|gb|AES76186.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1401

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 248/727 (34%), Positives = 354/727 (48%), Gaps = 140/727 (19%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           MA  S S +      + VFLSFRG D R+ F  +L  AL  + I TFIDD  L RG+EI+
Sbjct: 1   MAMQSPSSSFSYGFTYQVFLSFRGSDTRYGFTGNLYKALTNKGIHTFIDDNHLPRGSEIT 60

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKI--------LESKNKYGQIVV--PVFY 109
           PSL  AIE S+I I IFS  YASS +CL+ELV +        + S   YG+ +      +
Sbjct: 61  PSLIKAIEESRIFIPIFSTNYASSSFCLDELVHMSFTATRQRVASFCSYGEALADHEKRF 120

Query: 110 LVDPSD-----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDL 152
             D  +                 +GY  SLG+         E   I   V DIS K++ +
Sbjct: 121 QNDKDNMERLQRWKMAMRQVANLSGYHFSLGY---------EYEFIGKIVEDISDKINRV 171

Query: 153 FPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
                K   VG++  +++++  L   S E  + VGI+G GG+GK+T+A AIY+ ++  FE
Sbjct: 172 VLHVAKYP-VGLQYRVQQLKLLLDKESNEGVHMVGIYGTGGLGKSTLAKAIYNYVADQFE 230

Query: 212 GSYFMQNIRDES--------EKVGGLANIHLNFE-----------RRRLSRMKVLIVFYD 252
              F+  +R+ S        ++   L  I LN +           + RL R K+L++  D
Sbjct: 231 CVCFLHKVRENSTHNNLKHLQEELLLKTIKLNIKLGDVSEGIPLIKERLHRKKILLILDD 290

Query: 253 LTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           +  ++Q++ L G LD F  GSRVIITTRD  LL  HR  R    +EV+ +   ++  L  
Sbjct: 291 VDKMEQLEALAGGLDWFGRGSRVIITTRDKHLLTCHRVDRT---YEVEGIYGKEAFELLR 347

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
             AF    P  G+ E+ N  + YA+G+PL ++++GS L G S E W+S ++  +++P+  
Sbjct: 348 WLAFKDKVPL-GYEEILNRAVSYASGLPLVIEIVGSNLFGKSIETWKSTLDGYEKIPNTK 406

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLV 431
           IQ++LKVSYD L++EEQ++FLD AC FKG     V + L A      K  +  LV KSL+
Sbjct: 407 IQEILKVSYDALEEEEQSVFLDIACCFKGCKWTEVEDILHAHYGHCIKHHVGVLVEKSLL 466

Query: 432 TISNN--------KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP 483
            I+           +T+HDL+++MG EIVRQES K+PG+RSRLW  +DI  VL +NT   
Sbjct: 467 KINTQYRSARNHVDVTLHDLVEDMGKEIVRQESSKEPGERSRLWCHDDIVHVLQKNTG-- 524

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISCNIEDL----DLKETAIEE---------LPSSI- 529
                 +++ +YL  C  ++  P I CN +       LK   IE          LP+S+ 
Sbjct: 525 ----TSNIEMIYL-NCPAME--PVIDCNGKSFKKMTKLKTLIIENGHFSKGPKYLPNSLR 577

Query: 530 ------------------GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
                                  +  L   NC  L  V             N+SG L LE
Sbjct: 578 VFKWKGCTSESLSSSIFSKKFDFMKVLTFDNCEYLTHVP------------NVSGLLNLE 625

Query: 572 KLPEE-----------IGNLESLEYLNLAEK--DFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           K   E           IG L  LE LN A+K    E  P    QL  L +  L  C+ L+
Sbjct: 626 KFSVEKSNNLITIHDSIGKLNKLEILN-AKKCIKLESFPPL--QLPSLKEFELSYCRSLK 682

Query: 619 SLPELPC 625
             PEL C
Sbjct: 683 KFPELLC 689



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 44/236 (18%)

Query: 407 VMNFLDACRFSAKI-GISRLVG--KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKR 463
           V+ F D C +   +  +S L+   K  V  SNN IT+HD +                GK 
Sbjct: 603 VLTF-DNCEYLTHVPNVSGLLNLEKFSVEKSNNLITIHDSI----------------GKL 645

Query: 464 SRLWHPEDIYQVLNENT-----SLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDL 515
           ++L       ++LN        S P  + L SLKE  L  C +LK+FPE+ C   N++++
Sbjct: 646 NKL-------EILNAKKCIKLESFPP-LQLPSLKEFELSYCRSLKKFPELLCKMTNLKEI 697

Query: 516 DLK-ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC------L 568
            L   T+I  LP S  NLS L  + +   SG+      +  +  +   N+         L
Sbjct: 698 ALHNNTSIGGLPFSFENLSELRHVTIYR-SGMLRFPKHIDKMYPIVFSNVESLSLYESNL 756

Query: 569 KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
             E LP  +    ++++L+L++ +F+ +P  +K+   L  L L +CK L+ +  +P
Sbjct: 757 SFECLPMLLKWFVNVKHLDLSKNNFKILPECLKECHLLRILELNHCKSLEEIRGIP 812


>gi|357452851|ref|XP_003596702.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355485750|gb|AES66953.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 747

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 184/524 (35%), Positives = 268/524 (51%), Gaps = 86/524 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           ++DVF+SFRG D R  FV HL+A L  + I  F DDK L +G  +SP L  AI+ S+ISI
Sbjct: 67  RYDVFISFRGADTRSTFVDHLHAHLTTKGIFAFKDDKRLEKGESLSPQLLQAIQSSRISI 126

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+FS+ YA S  CL E+  I E   +  Q V P+FY  DPS                   
Sbjct: 127 VVFSKNYAESTLCLEEMATIAEYHTELKQTVFPIFYDADPSHVRKQSGVYQNAFVLLQNK 186

Query: 117 ------------GYCPSLGWMGIFDI---PTSESV--LIEGNVNDISKKLSDLFPSDNKD 159
                       G   SL  +  +D+   P    +  +++  +N +  K          D
Sbjct: 187 FKHDPNKVMRWVGAMESLAKLVGWDVRNKPEFREIKNIVQEVINTMGHKFLGF-----AD 241

Query: 160 QLVGVESIIKEIES--QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
            L+G++  ++E+ES  +L S   EF  +GIWG+ GI KTT+AS +Y  +S  F+ S F++
Sbjct: 242 DLIGIQPRVEELESLLKLDSKDYEFRAIGIWGMAGIRKTTLASVLYDRVSYQFDASCFIE 301

Query: 218 NIRDESEKVGGLANIHL----------NFE-----------RRRLSRMKVLIVFYDLTDL 256
           N+  +  K GG   +            N E           R+RL   K L+V  +   L
Sbjct: 302 NV-SKIYKDGGATAVQKQILRQTIDEKNLETYSPSEISGIIRKRLCNKKFLVVLDNADLL 360

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q++ L    +    GSR+IITTRD+                      ND+  LF R AF
Sbjct: 361 EQMEELAINPELLGKGSRIIITTRDI----------------------NDARKLFYRKAF 398

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
               P +G ++L+  V+KYA G+PLA++V+GS+L      +W  A+ +L+  P  ++  V
Sbjct: 399 KSEDPTSGCVKLTPEVLKYAQGLPLAVRVVGSFLCTRDANQWRDALYRLRNNPDNNVMDV 458

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           L+VS++GL  E++ IFL  ACFFKG  +  V   LDAC     IGI  L+ +S +TI NN
Sbjct: 459 LQVSFEGLHSEDREIFLHIACFFKGEKEDYVKRILDACGLHPHIGIQSLIERSFITIRNN 518

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           +I MH++LQE+G +IVRQ+    PG  SRLW  +D Y V+   T
Sbjct: 519 EILMHEMLQELGKKIVRQQFPFQPGSWSRLWLYDDFYSVMMTET 562


>gi|297734814|emb|CBI17048.3| unnamed protein product [Vitis vinifera]
          Length = 872

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 216/645 (33%), Positives = 326/645 (50%), Gaps = 129/645 (20%)

Query: 103 IVVPVFYLVDPSDAGYCPSL---------------------GW---------MGIFDIPT 132
           +V+P+FY VDPS+      +                      W         +  +D   
Sbjct: 2   VVIPIFYHVDPSEVRNQTEIYGEAFTHHEKNAEEERKEKIRKWKTALRQASNLAGYDATN 61

Query: 133 S-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIG 191
             ES LI+  + ++ +        +  + +VG++S ++ + S L     +   VG++G+G
Sbjct: 62  RYESELIDEIIENVLRSFPKTLVVN--ENIVGMDSRLERLISLLKIELNDVRMVGVYGLG 119

Query: 192 GIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG--------------------LAN 231
           GIGKTTI +A+Y+ IS+ FE    + ++R ES +  G                    L +
Sbjct: 120 GIGKTTIINALYNRISNQFESVSLLTDVRKESTENSGLLKLQQQLLNDTLRTTRKIVLRD 179

Query: 232 IHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
           +H   +  R +LS  KVL+   D+ +L Q++ LIG+ D F PGSR+IITTR   LL  H 
Sbjct: 180 VHEGIKEIRDKLSSKKVLVFLDDVDELTQLEHLIGKHDWFGPGSRIIITTRKKDLLTRHE 239

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              V  ++EV++L ++++L LF R AF Q+HP  G+ +LS+ V++YA+G+PLAL+VLGS 
Sbjct: 240 ---VNDMYEVEKLYFHEALQLFCRYAFKQHHPKEGYGDLSHQVVQYADGLPLALKVLGSL 296

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           L G    +W+S + KL+++P+M+I KVLK+S+DGLD  ++ IFLD ACFF+G+D   V  
Sbjct: 297 LFGKRLPDWKSELQKLEKVPNMEIVKVLKISFDGLDYTQRMIFLDIACFFRGDDVKRVSR 356

Query: 410 FLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
            LDA  F+A+ GI+ LV +  +TIS +N+I MHDLL +MG  IV QE   +PG+RSRLW 
Sbjct: 357 ILDASEFNAESGINALVDRCFITISKDNRIDMHDLLAQMGKGIVDQECPNEPGERSRLWR 416

Query: 469 PEDIYQVLNENTSLPT--GINLDSLKELYLGGCSN----LKRFPEISCNIEDLDLKET-- 520
             DIY+VL  NT      GI L   K   +   S     + R   +S +   + L +   
Sbjct: 417 HIDIYRVLKRNTGTEKIEGIYLHVDKSEQIQFTSKAFERMHRLRLLSISHNHVQLSKDFV 476

Query: 521 -------------AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN---- 563
                        ++E LPS+  + + LV L L N +        +C L++LRR+N    
Sbjct: 477 FPYDLTYLRWNGYSLESLPSNF-HANNLVSLILGNSNIKLLWKGNMC-LRNLRRINLSDS 534

Query: 564 -------------------LSGCLKLEKLPEEI------------------------GNL 580
                              LSGC+ LE LP +I                         N+
Sbjct: 535 QQLIELPNFSNVPNLEELILSGCVSLESLPGDIHESKHLLTLHCTGCSKLASFPKIKSNI 594

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             LE L L E   +++PSS++ L  L  L L NCK L+ LP   C
Sbjct: 595 AKLEELCLDETAIKELPSSIELLEGLRYLNLDNCKNLEGLPNSIC 639



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 4/112 (3%)

Query: 481 SLPTGINLDS-LKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLV 536
           SLP  I+    L  L+  GCS L  FP+I  NI   E+L L ETAI+ELPSSI  L  L 
Sbjct: 562 SLPGDIHESKHLLTLHCTGCSKLASFPKIKSNIAKLEELCLDETAIKELPSSIELLEGLR 621

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
            L+L NC  L+ + + +CNL+ L  L+L GC KL++LPE++  +  LE L L
Sbjct: 622 YLNLDNCKNLEGLPNSICNLRFLVVLSLEGCSKLDRLPEDLERMPCLEVLYL 673


>gi|186511937|ref|NP_193424.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658421|gb|AEE83821.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1040

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 243/771 (31%), Positives = 376/771 (48%), Gaps = 148/771 (19%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA++SSS +     ++DVF SF G DVR  F+S+L  A  R  I TF+D  + R   I+P
Sbjct: 1   MAAASSSCSR----RYDVFPSFSGVDVRKTFLSNLLEAFDRRSINTFMDHGIERSRTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYC 119
            L SAI  ++ISIVIFS+ YASS WCL+ELV+I    N +GQ+V+ VFY VDPS+     
Sbjct: 57  ELISAIREARISIVIFSKNYASSTWCLDELVEIHNRLNDWGQLVISVFYDVDPSEVRKQT 116

Query: 120 PSLG-----------------WM-GIFDIPT----------SESVLIEGNVNDISKKLSD 151
              G                 WM  + DI            SE+ ++    ND+S KL  
Sbjct: 117 GEFGDVFKKTCEDKEEDQKQRWMQALVDITNIAGEDLRNGPSEAAMVVKIANDVSNKL-- 174

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + PS++    VG+E+ ++ + S L   S E   VGIWG  GIGK+TI  A+YS +   F 
Sbjct: 175 ISPSNSFGDFVGIEAHLEAMNSILCLESKEARMVGIWGPSGIGKSTIGKALYSQLFCQFH 234

Query: 212 GSYFMQNI---RDESE------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
              F+ ++   + E E            K+GG     L    + L++ KVLIV  D+ D 
Sbjct: 235 FHAFVPHVYSMKSEWEEIFLSKILGKDIKIGG----KLGVVEQMLNQKKVLIVLDDVDDP 290

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           + +  L+G    F PGSR+I+ T+D+QLLK H    +  ++EVK  S + +L +  R+AF
Sbjct: 291 EFLKTLVGETKWFGPGSRIIVITQDMQLLKAHD---IDLLYEVKFPSLDLALKMLCRSAF 347

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           G+N P   F  L+  V   A  +PL L VLGS LK  ++EEW   + + +   + DI K 
Sbjct: 348 GENSPPDDFKALAFEVAVLAGNLPLGLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKT 407

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
           L+VSYD L  ++Q++FL  AC F G +   V + L+       +G++ LV KSL+ I+ +
Sbjct: 408 LRVSYDRLHQKDQDMFLYIACLFNGFEVSYVNDLLE-----DNVGVTMLVEKSLIRITPD 462

Query: 436 NKITMHDLLQEMGGEIVRQESIKD-------PGKRSRLWHPED----------------- 471
             I MH+LL+++G EI R +S +           RS+   P D                 
Sbjct: 463 GDIEMHNLLEKLGIEIDRAKSKETVLGIRFCTAFRSKELLPIDEKSFQGMRNLQCLSVTG 522

Query: 472 ---------IY-----QVLNEN----TSLPTGINLDSLKELYLGGCSNLKRFPEISC--- 510
                    +Y     ++L+ +      LP     D L +L + G S L++  E +    
Sbjct: 523 DYMDLPQSLVYLPPKLRLLDWDRCPLKCLPYSFKADYLIQLTMMG-SKLEKLWEGTVPLG 581

Query: 511 NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           +++ +++  +      S + N   L +L+L+ C  L ++SS + N   L  L++ GC KL
Sbjct: 582 SLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKL 641

Query: 571 EKLPEEIGNLESLEYL-------NLAEKDF----------------------------EK 595
           E  P  + NLESLEYL       NL   D+                            EK
Sbjct: 642 ESFPTHL-NLESLEYLENCIWNKNLPGLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEK 700

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS---SIHARHCTSLKTLSNS 643
           +   ++ L+ L ++ +  C  L  +P+L   +   +++  +C SL T+ ++
Sbjct: 701 LWEGVQSLASLVEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPST 751



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 54/86 (62%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT +NL SLK L L GCS+L+ FP IS +I+ L L+ TAIEE+P  I N S L  L + 
Sbjct: 772 LPTDVNLSSLKMLDLSGCSSLRTFPLISKSIKWLYLENTAIEEVPCCIENFSWLTVLMMY 831

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGC 567
            C  LK++S  +  L  L+ ++ + C
Sbjct: 832 CCKRLKNISPNIFRLTILKLVDFTEC 857



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 21/158 (13%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS----------CNIEDLDLKETAI------EE 524
           S PT +NL+SL+  YL  C   K  P +           C     DL    +      E+
Sbjct: 643 SFPTHLNLESLE--YLENCIWNKNLPGLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEK 700

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           L   + +L+ LV++D++ C  L  +   L    +L  L LS C  L  +P  IGNL+ L 
Sbjct: 701 LWEGVQSLASLVEMDMSECGNLTEIPD-LSKATNLVNLYLSNCKSLVTVPSTIGNLQKLV 759

Query: 585 YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L + E    E +P+ +  LS L  L L  C  L++ P
Sbjct: 760 RLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFP 796



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 43/155 (27%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L SL E+ +  C NL   P++S                       + LV+L L+NC  L
Sbjct: 707 SLASLVEMDMSECGNLTEIPDLS---------------------KATNLVNLYLSNCKSL 745

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA----------------- 589
            +V S + NL+ L RL +  C  LE LP ++ NL SL+ L+L+                 
Sbjct: 746 VTVPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIKW 804

Query: 590 ----EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                   E++P  ++  S L+ L +  CKRL+++
Sbjct: 805 LYLENTAIEEVPCCIENFSWLTVLMMYCCKRLKNI 839


>gi|7268442|emb|CAB80962.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1072

 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 243/771 (31%), Positives = 376/771 (48%), Gaps = 148/771 (19%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA++SSS +     ++DVF SF G DVR  F+S+L  A  R  I TF+D  + R   I+P
Sbjct: 1   MAAASSSCSR----RYDVFPSFSGVDVRKTFLSNLLEAFDRRSINTFMDHGIERSRTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYC 119
            L SAI  ++ISIVIFS+ YASS WCL+ELV+I    N +GQ+V+ VFY VDPS+     
Sbjct: 57  ELISAIREARISIVIFSKNYASSTWCLDELVEIHNRLNDWGQLVISVFYDVDPSEVRKQT 116

Query: 120 PSLG-----------------WM-GIFDIPT----------SESVLIEGNVNDISKKLSD 151
              G                 WM  + DI            SE+ ++    ND+S KL  
Sbjct: 117 GEFGDVFKKTCEDKEEDQKQRWMQALVDITNIAGEDLRNGPSEAAMVVKIANDVSNKL-- 174

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + PS++    VG+E+ ++ + S L   S E   VGIWG  GIGK+TI  A+YS +   F 
Sbjct: 175 ISPSNSFGDFVGIEAHLEAMNSILCLESKEARMVGIWGPSGIGKSTIGKALYSQLFCQFH 234

Query: 212 GSYFMQNI---RDESE------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
              F+ ++   + E E            K+GG     L    + L++ KVLIV  D+ D 
Sbjct: 235 FHAFVPHVYSMKSEWEEIFLSKILGKDIKIGG----KLGVVEQMLNQKKVLIVLDDVDDP 290

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           + +  L+G    F PGSR+I+ T+D+QLLK H    +  ++EVK  S + +L +  R+AF
Sbjct: 291 EFLKTLVGETKWFGPGSRIIVITQDMQLLKAHD---IDLLYEVKFPSLDLALKMLCRSAF 347

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           G+N P   F  L+  V   A  +PL L VLGS LK  ++EEW   + + +   + DI K 
Sbjct: 348 GENSPPDDFKALAFEVAVLAGNLPLGLSVLGSSLKRRTKEEWMEMMPRFRNGLNGDIMKT 407

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-N 435
           L+VSYD L  ++Q++FL  AC F G +   V + L+       +G++ LV KSL+ I+ +
Sbjct: 408 LRVSYDRLHQKDQDMFLYIACLFNGFEVSYVNDLLE-----DNVGVTMLVEKSLIRITPD 462

Query: 436 NKITMHDLLQEMGGEIVRQESIKD-------PGKRSRLWHPED----------------- 471
             I MH+LL+++G EI R +S +           RS+   P D                 
Sbjct: 463 GDIEMHNLLEKLGIEIDRAKSKETVLGIRFCTAFRSKELLPIDEKSFQGMRNLQCLSVTG 522

Query: 472 ---------IY-----QVLNEN----TSLPTGINLDSLKELYLGGCSNLKRFPEISC--- 510
                    +Y     ++L+ +      LP     D L +L + G S L++  E +    
Sbjct: 523 DYMDLPQSLVYLPPKLRLLDWDRCPLKCLPYSFKADYLIQLTMMG-SKLEKLWEGTVPLG 581

Query: 511 NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           +++ +++  +      S + N   L +L+L+ C  L ++SS + N   L  L++ GC KL
Sbjct: 582 SLKRMNMHGSRYLREISDLSNARNLEELNLSECRSLVTLSSSIQNAIKLIYLDMRGCTKL 641

Query: 571 EKLPEEIGNLESLEYL-------NLAEKDF----------------------------EK 595
           E  P  + NLESLEYL       NL   D+                            EK
Sbjct: 642 ESFPTHL-NLESLEYLENCIWNKNLPGLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEK 700

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS---SIHARHCTSLKTLSNS 643
           +   ++ L+ L ++ +  C  L  +P+L   +   +++  +C SL T+ ++
Sbjct: 701 LWEGVQSLASLVEMDMSECGNLTEIPDLSKATNLVNLYLSNCKSLVTVPST 751



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 54/86 (62%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT +NL SLK L L GCS+L+ FP IS +I+ L L+ TAIEE+P  I N S L  L + 
Sbjct: 772 LPTDVNLSSLKMLDLSGCSSLRTFPLISKSIKWLYLENTAIEEVPCCIENFSWLTVLMMY 831

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGC 567
            C  LK++S  +  L  L+ ++ + C
Sbjct: 832 CCKRLKNISPNIFRLTILKLVDFTEC 857



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 21/158 (13%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS----------CNIEDLDLKETAI------EE 524
           S PT +NL+SL+  YL  C   K  P +           C     DL    +      E+
Sbjct: 643 SFPTHLNLESLE--YLENCIWNKNLPGLDYLACLVRCMPCEFRPNDLVRLIVRGNQMLEK 700

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           L   + +L+ LV++D++ C  L  +   L    +L  L LS C  L  +P  IGNL+ L 
Sbjct: 701 LWEGVQSLASLVEMDMSECGNLTEIPD-LSKATNLVNLYLSNCKSLVTVPSTIGNLQKLV 759

Query: 585 YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L + E    E +P+ +  LS L  L L  C  L++ P
Sbjct: 760 RLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFP 796



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 43/155 (27%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L SL E+ +  C NL   P++S                       + LV+L L+NC  L
Sbjct: 707 SLASLVEMDMSECGNLTEIPDLS---------------------KATNLVNLYLSNCKSL 745

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA----------------- 589
            +V S + NL+ L RL +  C  LE LP ++ NL SL+ L+L+                 
Sbjct: 746 VTVPSTIGNLQKLVRLEMKECTGLEVLPTDV-NLSSLKMLDLSGCSSLRTFPLISKSIKW 804

Query: 590 ----EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                   E++P  ++  S L+ L +  CKRL+++
Sbjct: 805 LYLENTAIEEVPCCIENFSWLTVLMMYCCKRLKNI 839


>gi|227438257|gb|ACP30618.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1016

 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 220/670 (32%), Positives = 354/670 (52%), Gaps = 99/670 (14%)

Query: 41  REKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY 100
           R+ I  FID+++ RG  I P L  AI GSKI+I++ S  YASS+WCL+ELV+I++ + + 
Sbjct: 5   RKGITPFIDNEIRRGESIGPELIRAIRGSKIAIILISRNYASSKWCLDELVEIMKCREEL 64

Query: 101 GQIVVPVFYLVDPSD----------------AGYCPSL--GWMGIF-DIPT--------- 132
           GQ V+PVFY VDPS+                AG        W   F  + T         
Sbjct: 65  GQTVMPVFYEVDPSNVKKLTGDFGKVFRKTCAGKTKECIKRWRQAFAKVATIAGYHSSNW 124

Query: 133 -SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIG 191
            +E+ +I+    DIS  L++  PS++ D+L+G+E+ +++++  L  GS E   +GIWG  
Sbjct: 125 DNEADMIKKITTDISNMLNNFTPSNDLDELIGMEAQLEKMKPLLCLGSDEVRMIGIWGPP 184

Query: 192 GIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG----------------------L 229
           GIGKTTIA   ++ +S+ F+ S FM +++    ++                        +
Sbjct: 185 GIGKTTIARFAFNQLSNRFQLSVFMDDLKPNPTRLCSDDYSLKLQLHQRFMSQITNHKDM 244

Query: 230 ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
              HL     RL   KVL+V   +    Q+D +      F PGSR+IITT+D ++ + H 
Sbjct: 245 VVSHLGVASNRLKDKKVLVVLDGVDRSVQLDAVAKEAWWFGPGSRIIITTQDRRIFRAHG 304

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              V H+++V   + + +L +F   +FGQ  P  GF EL+  V + +  +PL L+V+GSY
Sbjct: 305 ---VNHIYKVDFPTSDAALQIFCTYSFGQKSPKDGFEELAREVTQLSGELPLGLRVMGSY 361

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGN-----DQ 404
            KGMS++EW +A+ +L+     DI  +LK SYD LDDE++ +FL  AC +K       ++
Sbjct: 362 FKGMSKQEWINAIPRLRTSLDSDIGSILKFSYDALDDEDKYLFLYIACCYKSEWINEVEE 421

Query: 405 YLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKR 463
           YL   F++      +  ++ LV KSL++IS    I MH LL+++G EIV ++S ++PG+R
Sbjct: 422 YLAKKFVE-----VRQRLNVLVDKSLISISLLGVIEMHSLLKKLGREIVCKQS-QEPGQR 475

Query: 464 SRLWHPEDIYQVLNENTSLP---TGINLD--------SLKELYLGGCSNLKRFPEISCNI 512
             L+   ++ +VL  + +      GINLD         + E    G SNL+ F ++SC+ 
Sbjct: 476 QFLYDEREVCEVLTGDATGSKSVIGINLDYSREGKEIDISEKAFEGMSNLQ-FLKVSCS- 533

Query: 513 EDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL--KSLRRLNLSGCLK 569
               +K T  +  LP  +    RL  L  ++C     ++   CN+  + L  L++S   K
Sbjct: 534 -HFTMKSTRGLSYLPHKL----RL--LKWSHC----PMTCFPCNVNFEFLVELSMSNS-K 581

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS-- 627
           LEKL E    L SL+ +++  ++ +++P  +   + L  L L NC  L  LP LP  S  
Sbjct: 582 LEKLWEVTKPLRSLKRMDM--RNSKELP-DLSTATNLKRLNLSNCSSLIKLPSLPGNSMK 638

Query: 628 SIHARHCTSL 637
            ++ + C+SL
Sbjct: 639 ELYIKGCSSL 648



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 92/189 (48%), Gaps = 40/189 (21%)

Query: 461 GKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET 520
           G   +LW  E   Q  ++   LPT INL SL  L L  CS LK FP+IS N+E LDL+ T
Sbjct: 704 GNLQKLWWLE--LQGCSKLEVLPTNINLKSLYFLNLSDCSMLKSFPQISTNLEKLDLRGT 761

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL---EKLPEEI 577
           AIE++P SI                     SR C          S  LK+   E L E  
Sbjct: 762 AIEQVPPSI--------------------RSRPC----------SDILKMSYFENLKESP 791

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHC 634
             LE +  L L + + +++P  +K++S+LS L ++ C++L S+P  P   SI    A  C
Sbjct: 792 HALERITELWLTDTEIQELPPWVKKISRLSQLVVKGCRKLVSVP--PLSDSIRYIDASDC 849

Query: 635 TSLKTLSNS 643
            SL+ +  S
Sbjct: 850 ESLEMIECS 858



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 4/151 (2%)

Query: 476 LNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCN-IEDLDLKE-TAIEELPSSIGNLS 533
           +  +  LP      +LK L L  CS+L + P +  N +++L +K  +++ E PS IGN  
Sbjct: 600 MRNSKELPDLSTATNLKRLNLSNCSSLIKLPSLPGNSMKELYIKGCSSLVEFPSFIGNAV 659

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
            L  LDL++   L  + S + N  +L++L+L  C  L +LP  IGNL+ L +L L     
Sbjct: 660 NLETLDLSSLPNLLELPSFVENATNLKKLDLRFCSNLVELPFSIGNLQKLWWLELQGCSK 719

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            E +P+++  L  L  L L +C  L+S P++
Sbjct: 720 LEVLPTNI-NLKSLYFLNLSDCSMLKSFPQI 749


>gi|297848244|ref|XP_002892003.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337845|gb|EFH68262.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 241/759 (31%), Positives = 365/759 (48%), Gaps = 138/759 (18%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF SF GKDVR  F+SH      R+ I  F+D+++ RG  I P L  AI+GSKI++V
Sbjct: 23  EYDVFPSFHGKDVRKTFLSHQLKEFGRKAINFFVDNEIKRGEFIGPELKRAIKGSKIAVV 82

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------YCPSL 122
           + S+ YASS WCL+ELV+I+  K + GQ V+ +FY VDP+D               C   
Sbjct: 83  LLSKNYASSSWCLDELVEIM--KKESGQTVITIFYEVDPTDVKKQKGDFGKVFKKTCKGK 140

Query: 123 G------WM----GIFDIP-------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
           G      W     G+  I          ES +IE    +IS KL+ L PS + D L+G+ 
Sbjct: 141 GKEKVQTWKKALEGVATIAGYHSSNWVDESTMIENIAAEISNKLNHLTPSRDFDHLIGMG 200

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD---- 221
           + +K++E  L     E   +GIWG  GIGKTTIA  +++ +S++F+ S FM NI+     
Sbjct: 201 AHMKKMEQYLRLDLDEVRMIGIWGPPGIGKTTIARFMFNQLSNNFQNSAFMVNIKGSYPR 260

Query: 222 ------------ESEKVGGLANI------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
                       + E +  + N       HL   + RL   KV++V  D+  L Q++ L 
Sbjct: 261 PCLDEYTAQFQLQKEMLCEMFNQKDIMISHLGVVQGRLGDRKVILVLDDVDRLAQLNALA 320

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
             +  F  GSR+IITT D++LLK H    + H+++V   S ++SL +F   AF Q  P  
Sbjct: 321 KNVHWFGRGSRIIITTEDLRLLKAHG---IDHIYKVNFPSNDESLQMFCMYAFDQKSPKD 377

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF  L+  +      +PL L+V+GSY +G+S+E W   V++L+   + +I+ +LK SYD 
Sbjct: 378 GFDGLAREITYLVGELPLGLKVMGSYFRGLSKERWSMEVSRLRTNLNGEIESILKFSYDA 437

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK------ 437
           L DE++++FL  ACFF G     V  FL          +  LV KSL++I  N+      
Sbjct: 438 LCDEDKDLFLHIACFFNGEKMRRVKEFLAEKFKDLSQRLDVLVEKSLISIEYNQYDYQRK 497

Query: 438 ----ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG-INLDSLK 492
               +TMH LL ++G +I     + +P +R  L    DI  +L   T++    I ++S  
Sbjct: 498 HDSYVTMHKLLGQLGRKIASNSDL-EPRQRQFLIET-DISALLPGYTAITRSFIGIESKY 555

Query: 493 ELYLG-----GCSNLK--------------------------------RFPEISC----- 510
            L +      G SNL+                                 F  ++C     
Sbjct: 556 GLNITGEIFEGMSNLQFLRISNDHGHRNIISSQRCLTFISPNLRLLYWSFCPMTCLSFTN 615

Query: 511 NIE---DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
           ++E   +L +  + +E+L      L  L  +DL++   LK + + L    +L  L++ GC
Sbjct: 616 DLEFLVELKMFCSTLEKLWDGTKLLRNLKRIDLSSSRYLKELPN-LSMATNLTSLDVRGC 674

Query: 568 LKLEKLPEEIGNLESLE--YLN----LAEKDFEKIP----------------SSMKQLSK 605
             L +LP  IGN  +LE  +LN    L E     IP                 S   L+ 
Sbjct: 675 SSLVELPSSIGNATNLEGLFLNGCSSLVELHCCPIPFAGSLDLSGCSSLVELPSFSHLTN 734

Query: 606 LSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNS 643
           L  L L+ C RL SLP+LP    +  A +C SL+ +  S
Sbjct: 735 LQKLSLKGCSRLVSLPKLPDSLMVLDAENCESLEKIDCS 773


>gi|359493289|ref|XP_003634561.1| PREDICTED: putative disease resistance protein At4g11170-like
           [Vitis vinifera]
          Length = 944

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 245/706 (34%), Positives = 347/706 (49%), Gaps = 115/706 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISI 73
           ++DVFLSFRG+D R  F  HL AAL  + I TF D ++L RG EI   L  AI  S+I I
Sbjct: 17  RYDVFLSFRGEDTRTGFTDHLYAALVDKGIRTFRDSEELRRGEEIEGELLKAIHESRIFI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----AGYCPSLG------ 123
           +IFSE YA+S+WCL EL +I + K K G+ V PVFY VDPS+    +GY           
Sbjct: 77  IIFSEDYANSKWCLKELAEISKCKAK-GRKVFPVFYHVDPSEVRNQSGYYGEAFAAYEND 135

Query: 124 ----------W----------MGIFDIPTSESVLIEGNVND-----ISKKLSDLFPSDNK 158
                     W          +G       E+ +++    D     I K   +    D K
Sbjct: 136 ANQDSERIQVWRTALKEAGHIIGYHIDKEPEADVVKTITRDMICEIIGKDCVEDGLVDKK 195

Query: 159 DQLVGVESIIKEIESQLLSG----STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
            +L  ++ +I + E   + G    S +   VGI+G  GIGKTTIA A+Y  IS  F+G+ 
Sbjct: 196 SRLKKLKELIWKSEDVSMDGIRRKSRDVLMVGIFGSAGIGKTTIARALYDEISCQFDGAS 255

Query: 215 FMQNIRDESEK---------------VGGLANIHL---NFERRRLSRMKVLIVFYDLTDL 256
           F+ NIR+ S+K               +GG   + L   N    +    KVLIV  D+ D 
Sbjct: 256 FLANIREVSKKDGLCCLQERLFCDILLGGRKVMLLRRDNLMESKFCTKKVLIVLDDVNDK 315

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           KQ++LL GR D F  GSR+IIT R+  LL  H+   V   +E K+L   ++L L   +A 
Sbjct: 316 KQLELLAGRHDWFGKGSRIIITCRNEHLLLRHK---VDESYEFKKLDGLEALALLCHHAL 372

Query: 317 GQNH-PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
            +   P   FL L NI  +  N  PL L+V GSYL+G  +  WE  VN           K
Sbjct: 373 TEEQSPFKRFLFLDNIRARCENN-PLKLKVAGSYLRGKEDANWEIYVN----------SK 421

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
            LKVSY+ L +EE++IFLD ACFF+G  +  V   L+   FSAK G+  L  + L+TIS 
Sbjct: 422 FLKVSYEDLLEEEKDIFLDVACFFQGECEDFVTKILEKPDFSAKQGVQVLSNRCLLTISE 481

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT---SLPTGINL---- 488
            K+ M + +QEM  +I  +++ + PGK  RLW    I  VL  N    +L  GI+L    
Sbjct: 482 GKLWMDNSIQEMAWKIANKQA-QIPGKPCRLWDHNKILHVLKRNEGIHALIEGISLELSK 540

Query: 489 --------------DSLK--ELYLG-GCSNLKR-----------FPEISCNIEDLDLKET 520
                         D+L+  +++LG GC N K            FP     +  L     
Sbjct: 541 SKDKKFSGEAFSEMDALRLLKVFLGSGCVNDKETYKVHFSTDFTFPSYD-KLRYLHGHGY 599

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
            ++  PS+      L++L++  CS LK +     +  +L  L+LS   +LE +      +
Sbjct: 600 QLDSFPSNF-EAEELLELNMP-CSSLKQIKGDEIHFPNLIALDLSHSQQLETI-SNFSRM 656

Query: 581 ESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            +LE L L   +   K+  S+  L KLS + L+ CKRL+SLP+  C
Sbjct: 657 PNLERLVLEGCRSLVKVDPSIVNLKKLSLMNLKGCKRLKSLPKRIC 702



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 87/194 (44%), Gaps = 33/194 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKR-------FPEISCNIEDLDLKETAIEELPSSIGNLS 533
           S P+    + L EL +  CS+LK+       FP    N+  LDL  +   E  S+   + 
Sbjct: 603 SFPSNFEAEELLELNMP-CSSLKQIKGDEIHFP----NLIALDLSHSQQLETISNFSRMP 657

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA---- 589
            L  L L  C  L  V   + NLK L  +NL GC +L+ LP+ I   + LE L L     
Sbjct: 658 NLERLVLEGCRSLVKVDPSIVNLKKLSLMNLKGCKRLKSLPKRICKFKFLETLILTGCSR 717

Query: 590 -EK---DFEKIPSSMKQLS------------KLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
            EK   D E+  +S+   +             L  L L +CKR Q + +LP     + A 
Sbjct: 718 LEKLLGDREERQNSVNLKASRTYRRVIILPPALRILHLGHCKRFQEILKLPSSIQEVDAY 777

Query: 633 HCTSLKTLSNSSTL 646
           +C S+ TLS ++ L
Sbjct: 778 NCISMGTLSWNTRL 791


>gi|13509207|emb|CAC35321.1| Ngc-D protein [Linum usitatissimum]
          Length = 1108

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 235/747 (31%), Positives = 368/747 (49%), Gaps = 147/747 (19%)

Query: 2   ASSSSSINMIPHP--KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEI 58
           + SS+ +   P P  +++VFLSFRG DVR  F  HL  +L R K  TF D++ L +G  I
Sbjct: 15  SCSSADLTFPPLPSGEYEVFLSFRGPDVRKTFADHLYTSLVRSKFRTFRDEEELEKGGTI 74

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDP 113
            PSL  AI  SKI I I +  YASS+WCL EL K++      G      I++PVF  VDP
Sbjct: 75  GPSLIRAITESKIYIPILTPNYASSKWCLQELAKMVGCWKSGGGAKGQHIILPVFLFVDP 134

Query: 114 SDAGYCPSLGWMGIFDIPTS----ESVL-------------------IEGNVNDISKKLS 150
            D  +  S  +   F+  +     E+VL                    +G+ + I K L+
Sbjct: 135 RDVRHTESGSYKEAFEEHSQKHDPETVLEWKEALQEVGEMKGYHVTESDGHGSIIDKILT 194

Query: 151 D--LFPSDN----KDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIY 203
           +  L    N     D+LVG++S + E+   L L  ST    +GI G+GG+GKTT+A A+Y
Sbjct: 195 EVELHLGANYALVTDELVGIDSRVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVY 254

Query: 204 SNISSHFEGSYFMQNIRDE-SEKVG----------GL----------ANIHLNFERRRLS 242
             +S+ FE  YF++NIRD  SEK G          G+          A+  +   R R+ 
Sbjct: 255 DKVSTKFERCYFLENIRDTLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVC 314

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRD---VQLLKNHRGSRVGHVFEV 299
           R K+LIV  D+ +  Q D ++G+L+ F   SR +ITTRD   ++LL+ ++      +FE+
Sbjct: 315 RHKLLIVLDDVDEKFQFDDVLGKLNNFSTNSRFLITTRDARGLELLQEYK------MFEL 368

Query: 300 KELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWE 359
           +E+S + SLTLF+++AF  + P   +  LS   ++ A G+PL ++V+GS L  M +  WE
Sbjct: 369 QEMSPDHSLTLFNKHAFDVDCPPKDYAILSKEFVQAAAGLPLYIKVIGSLLFRMDKIFWE 428

Query: 360 SAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
             + + K++    +Q+ LK+SY+ L   E+ IFLD AC+F G+ +   +   + C F  +
Sbjct: 429 EKLEEFKKISPTKVQERLKISYNELTHNEKQIFLDIACYFIGSQKIYPIFMWEDCDFYPE 488

Query: 420 IGISRLVGKSLVTISNNKIT--------MHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
             I  L+ +SL+ +  ++I         MHD + ++G  IVR+E  ++P KRSR+W  +D
Sbjct: 489 STIRSLIQRSLIKLQRSRIKGDVLNTFWMHDHIIDLGRAIVREEKNQNPYKRSRIWSNKD 548

Query: 472 IYQVLNENTS----------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNI 512
              +L                     + T    + L  L     SN +    F ++  N+
Sbjct: 549 AVNMLKHKKGTDCVEVLTVDMEGEDLILTNKEFEKLTMLRYLKVSNARLAGDFKDVLPNL 608

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCS---------------GLKSVSSRLC--- 554
             L L+  + + +PS +  L +LV LDL +CS                LK+VS + C   
Sbjct: 609 RWLLLE--SCDSVPSGL-YLKKLVRLDLHDCSVGDSWKGWNELKVARKLKAVSLKRCFHL 665

Query: 555 ------------------------------NLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
                                         N KSLR L +S   K+ K+  EIG L +L+
Sbjct: 666 KKVPDFSDCGDLEFLNFDGCRNMRGEVDIGNFKSLRFLYISKT-KITKIKGEIGRLLNLK 724

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRL 611
           YL++ +   +++P+ + +LS L  L L
Sbjct: 725 YLSVGDSSLKEVPAGISKLSSLEFLAL 751


>gi|315507089|gb|ADU33180.1| putative TIR-CC-NBS-AAA+ATPase [Cucumis sativus]
          Length = 856

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 238/694 (34%), Positives = 363/694 (52%), Gaps = 104/694 (14%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
           SSSS   +P    DVFLSFRG+D R NF SHL+ ALC++ I  FIDD KL RG EI  SL
Sbjct: 7   SSSSHLRLPF---DVFLSFRGEDTRSNFTSHLHMALCQKGINVFIDDDKLPRGEEICTSL 63

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDA----- 116
             AIE SKISIVI SE YASS WCL+EL+KI+  +K+   Q+V PVFY V+PS       
Sbjct: 64  LKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVNPSHVRRQRG 123

Query: 117 ------------------GYCPSLGW---MGIFDIPT--SESVLIEGNVNDISKKLSDLF 153
                              +  +L +   M  +D+    +E+ LI+  V ++ KKL +  
Sbjct: 124 VFGEEFAKLQVRFSNKMQAWSEALTFISTMSGWDLKNYENEASLIQIIVQEVRKKLRNSA 183

Query: 154 PS--DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            +  D     VG++  +  +   ++S   E   VG++GIGG+GKTT+A A+Y+ I+  FE
Sbjct: 184 TTELDVAKYPVGIDIQVSNLLPHVMSN--EITMVGLYGIGGMGKTTLAKALYNKIADEFE 241

Query: 212 GSYFMQNIRDESEKVGGLAN---------------------IHLNFERRRLSRMKVLIVF 250
           G  F+ N+R+ S +  GL                       I ++  R RL   K++++ 
Sbjct: 242 GCCFLSNVREASNQYWGLVELQKTLLREILMDDSIKVSNVGIGISIIRDRLCSKKIILIL 301

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+   +Q+  L G    F  GS+VI TTR+ QLL +H G  +  +  V  L+  + L L
Sbjct: 302 DDVDTHEQLQALAGGHHWFGHGSKVIATTRNKQLLASH-GFNI--LKRVNGLNAIEGLEL 358

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMP 369
           FS +AF   HP++ +L++S   + Y  G+PLAL+VLGS+L  + ++ ++E  +++ +   
Sbjct: 359 FSWHAFNNCHPSSDYLDVSKRAVHYCKGLPLALEVLGSFLNSIDDQSKFERILDEYEN-S 417

Query: 370 HMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC--RFSAKIGISRL 425
           ++D  IQ +L++SYD L+ + ++IFL  +C F   D+  V   L  C  RF  ++GI +L
Sbjct: 418 YLDKGIQDILRISYDELEQDVKDIFLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKL 477

Query: 426 VGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE------ 478
              SL+TI   N++ MHDL+Q+MG  I   E+  +  KR RL   +D+  VLN       
Sbjct: 478 TDLSLLTIDKFNRVEMHDLIQQMGHTIHLLET-SNSHKRKRLLFEKDVMDVLNGDMEARA 536

Query: 479 ------NTSLPTGINLDS--------LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE 524
                 N   PT +++DS        L  L +   ++ K    +  ++  +   +     
Sbjct: 537 VKVIKLNFHQPTELDIDSRGFEKVKNLVVLKVHNVTSSKSLEYLPSSLRWMIWPKFPFSS 596

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES-- 582
           LPS+  +L +L +L + + S +K   +   N K L+R+NL+      K  EEI +L S  
Sbjct: 597 LPSTY-SLEKLTELSMPS-SFIKHFGNGYLNCKWLKRINLN----YSKFLEEISDLSSAI 650

Query: 583 -LEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNC 614
            LE LNL+E K  E      KQL     + + NC
Sbjct: 651 NLEELNLSECKKLEYADGKYKQL-----ILMNNC 679


>gi|41387774|gb|AAS01763.1| TIR-NBS-LRR [Arabidopsis thaliana]
          Length = 1160

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 249/741 (33%), Positives = 364/741 (49%), Gaps = 118/741 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG+DVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSHNWL----YDVFLSFRGEDVRVTFRSHFLKELDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS  YASS WCLNEL++I+   +K   IV+PVFY VDPS   +  
Sbjct: 57  DLEQAIKESRIAVVVFSINYASSSWCLNELLEIVNCNDK---IVIPVFYHVDPSQVRH-- 111

Query: 121 SLGWMG-IFDIP-------------------------------TSESVLIEGNVNDISKK 148
            +G  G IF+                                   E+ +IE   ND+  K
Sbjct: 112 QIGDFGKIFENTCKRQTDEEVKNQWKKALTLVANMLGFDSAKWNDEAKMIEEIANDVLGK 171

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L    P D+ ++LVG+E  I E+   L   S E   VGI G  GIGKTTIA A++  +S 
Sbjct: 172 LLLTTPKDS-EELVGIEDHIAEMSLLLQLESEEVRMVGISGSSGIGKTTIARALFKRLSR 230

Query: 209 HFEGSYFMQ--------------NIRDESEKVG----------GLANIHLNFE---RRRL 241
           HF+GS F+               N  D + K+           G  +I ++       RL
Sbjct: 231 HFQGSTFIDRAFVSNSRNIYSGANPDDPNMKLQLQGHFLSEILGKKDIKIDDPAALEERL 290

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
              KVLI+  DL D+  +D L+G+   F  GSR+I+ T D   L  H    + H++EV  
Sbjct: 291 KHQKVLIIIDDLDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLTAH---GIDHIYEVSF 347

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
            +   +  +  ++AF QN+   GF +L   V+++A   PL L +LG YL+    E W   
Sbjct: 348 PTDVHAYQMLCQSAFKQNYAPKGFEDLVVDVVRHAGSFPLGLNLLGKYLRRRDMEYWMDM 407

Query: 362 VNKLKRMPHMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
           + +L+    +D  I+K+L++SYDGL+ E+Q IF   AC F   +   + + L     S  
Sbjct: 408 LPRLENGLRIDGKIEKILRISYDGLESEDQEIFRHIACLFNHMEVTTIKSLLADSDVS-- 465

Query: 420 IGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
             +  L  KSL+ +    + MH  LQEMG +IVR +SI  PG+R  L  P DI+ +LN  
Sbjct: 466 FALENLADKSLIHVRQGYVVMHRSLQEMGRKIVRIQSIDKPGEREFLVDPNDIHDILNAC 525

Query: 480 TSLPT--GINLDS--LKEL-----YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           T      GI+LD+  ++EL        G SNL RF E    I++  LKE ++  LP S  
Sbjct: 526 TGTQKVLGISLDTRNIRELDVHQRAFKGMSNL-RFLE----IKNFRLKEDSL-HLPPSFD 579

Query: 531 NLSRLV---------------DLDLTNCSGLKSVSSRL-------CNLKSLRRLNLSGCL 568
            L R +               D    N   L+   S+L         L  L+ ++L    
Sbjct: 580 YLPRTLKLLSWSKFPMRCMPFDFRPENLVKLEMKYSKLHKLWEGDVPLTCLKEMDLYASS 639

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELP 624
            L+ +P ++    +LE LNL       ++PSS++ L+KL +L + +CK L+ LP    L 
Sbjct: 640 NLKVIP-DLSKATNLEILNLQFCLSLVELPSSIRNLNKLLNLDMLDCKSLKILPTGFNLK 698

Query: 625 CGSSIHARHCTSLKTLSNSST 645
               ++  HC+ LKT    ST
Sbjct: 699 SLDRLNFSHCSKLKTFPKFST 719



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 55/93 (59%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L   GCS L+ FPEIS NI  L L ETAIE++P  I   S L +L +
Sbjct: 813 TLPTGINLQSLDSLSFKGCSRLRSFPEISTNISVLYLDETAIEDVPWWIEKFSNLTELSM 872

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            +CS LK V   +  LK L+      C KL ++
Sbjct: 873 HSCSRLKWVFLHMSKLKHLKEALFPNCGKLTRV 905



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 12/158 (7%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL--- 538
           LPTG NL SL  L    CS LK FP+ S NI  L+L +T IEE PS++ +L  LV     
Sbjct: 691 LPTGFNLKSLDRLNFSHCSKLKTFPKFSTNISVLNLSQTNIEEFPSNL-HLKNLVKFSIS 749

Query: 539 ----DLTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-K 591
               D+    G K ++  L  + S  L  L+L     L +LP    NL  L+ L +    
Sbjct: 750 KEESDVKQWEGEKPLTPFLAMMLSPTLTSLHLENLPSLVELPSSFQNLNQLKRLFIVRCI 809

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
           + E +P+ +  L  L  L  + C RL+S PE+    S+
Sbjct: 810 NLETLPTGI-NLQSLDSLSFKGCSRLRSFPEISTNISV 846


>gi|357468517|ref|XP_003604543.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505598|gb|AES86740.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1131

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 221/691 (31%), Positives = 334/691 (48%), Gaps = 125/691 (18%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEG 68
           N+ P  K DVF+SFRG+D+RH F  HL  A  R++I  F+D+KL RG+++S SL  AIEG
Sbjct: 104 NISPQSKDDVFVSFRGEDIRHGFFGHLVIAFPRKQINAFVDEKLKRGDDMSHSLVEAIEG 163

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF 128
           S IS+                       K KYGQIV+PVFY VDP++  +          
Sbjct: 164 SPISLC----------------------KEKYGQIVIPVFYGVDPTNVRHQKKSYENAFA 201

Query: 129 DIP---TSESVLIEGNVNDISKKLSDLFPSD------------------------NKDQL 161
           ++     S  V I  +  + S  LS +  SD                        N   L
Sbjct: 202 ELEKRCNSSKVQIWRHALNTSANLSGIKSSDFRNDAELLEEIINLLLKRLSKHPVNSKGL 261

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           +G++  I  + S L   S + + +GIWG+G IGKTTIA  I++   S +EG  F++ +  
Sbjct: 262 IGIDKSIAHLNSLLQKESEKVSVIGIWGMGSIGKTTIAGEIFNQNCSEYEGCCFLEKV-- 319

Query: 222 ESEKVGGLANIHL----------------------NFERRRLSRMKVLIVFYDLTDLKQI 259
            SE++G      L                      N+  RR+ RMKVLIV  D+ +  Q+
Sbjct: 320 -SEQLGRHGRTFLKEKLFSTLLAEDVKIRSPNGLSNYTVRRIGRMKVLIVLDDVKEEGQL 378

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           ++L   LD F   SR+I+TTRD Q+L  +       +++V  L  +++L LF+ NAF Q+
Sbjct: 379 EMLFRTLDWFRSDSRIILTTRDKQVLIANEVED-DDLYQVGVLDSSEALELFNLNAFKQS 437

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           H    + +LS  V+ YA G+PL L+VL   L+G  +EEWES ++KLKR+P+  IQ V+++
Sbjct: 438 HLEMEYYDLSKKVVDYAKGIPLVLEVLAHLLRGKDKEEWESQLDKLKRLPNKKIQDVMRL 497

Query: 380 SYDGLDDEEQNIFLDTACFFKGND------QYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           SYD LD  EQ  FLD ACFF G        + L+ +F      +  IG+ RL  K+L+TI
Sbjct: 498 SYDDLDRLEQKYFLDIACFFNGLRLKVDCMKLLLKDF--ESDNAVAIGLERLKDKALITI 555

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSL 491
           S + +                 SI+DP K S+LW P+ IY VL  ++ T +   I +D  
Sbjct: 556 SEDNVI----------------SIEDPIKCSQLWDPDIIYDVLKNDKGTDVIRSIRVD-- 597

Query: 492 KELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSS 551
               L     LK  P +   + +L         L    GN    +DL      G++S  +
Sbjct: 598 ----LSAIRKLKLSPHVFAKMTNLLF-------LDFHGGNYQECLDL---FPRGIQSFPT 643

Query: 552 RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
            L  +  +          L+ LP++  + E+L   +L+    EK+   +K L  L + RL
Sbjct: 644 DLRYISWM-------SYPLKSLPKKF-SAENLVIFDLSFSQVEKLWYGVKDLVNLQEFRL 695

Query: 612 QNCKRLQSLPELPCGSSIHARHCTSLKTLSN 642
            + + L+ LP+L   +++   + T    L N
Sbjct: 696 FDSRSLKELPDLSKATNLKVLNITQAPLLKN 726



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 15/169 (8%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAI-EELPSSIGNLSRLVDLDLTNC 543
           +L +L+E  L    +LK  P++S   N++ L++ +  + + +  S+ +L  LV+LDLT C
Sbjct: 686 DLVNLQEFRLFDSRSLKELPDLSKATNLKVLNITQAPLLKNVDPSVLSLDNLVELDLTCC 745

Query: 544 SGLKSV--SSRLCNLKSLRRLNLSGCLK----------LEKLPEEIGNLESLEYLNLAEK 591
               S     +L   K LR  +     K          + +LP   G+  +LE L     
Sbjct: 746 DNNLSFLFYHQLKKFKKLRTFSEIAYNKFPGQDLTKSWINELPLSFGSQSTLETLIFKGC 805

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
             E+IP S+K  ++L  + L  C +L+++PELP         C SLKT+
Sbjct: 806 RIERIPPSIKNRTRLRYINLTFCIKLRTIPELPSSLETLLAECESLKTV 854



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 17/117 (14%)

Query: 483 PTGINLDSLKELYLGGCSN---------------LKRFPEISCN-IEDLDLKETAIEELP 526
           P+ ++LD+L EL L  C N               L+ F EI+ N     DL ++ I ELP
Sbjct: 729 PSVLSLDNLVELDLTCCDNNLSFLFYHQLKKFKKLRTFSEIAYNKFPGQDLTKSWINELP 788

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
            S G+ S L  L    C  ++ +   + N   LR +NL+ C+KL  +PE   +LE+L
Sbjct: 789 LSFGSQSTLETLIFKGCR-IERIPPSIKNRTRLRYINLTFCIKLRTIPELPSSLETL 844


>gi|357456967|ref|XP_003598764.1| Resistance protein [Medicago truncatula]
 gi|355487812|gb|AES69015.1| Resistance protein [Medicago truncatula]
          Length = 1185

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 252/706 (35%), Positives = 362/706 (51%), Gaps = 96/706 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREK-IETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           +DVFLSFRG D R+NF  +L  +L  ++ I+TF+DD+ + +G EI+P+L  AI+ S+I I
Sbjct: 18  YDVFLSFRGIDTRNNFTGNLYHSLHHQRGIQTFMDDEEIQKGEEITPTLLQAIKQSRIFI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
            IFS  YASS +CL ELV ILE     G++ +PVFY VDPS        Y  +       
Sbjct: 78  AIFSPNYASSTFCLTELVTILECSMLQGRLFLPVFYDVDPSQIRNLTGTYAEAFAKHEVR 137

Query: 124 -----------WM----------GIFDIP--TSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                      W           G    P   SE  +IE  V ++S K++ + P      
Sbjct: 138 FGDEKDSKVQKWRDALRQAANVSGWHFKPGFESEYKIIEKIVEEVSVKINRV-PLHVATN 196

Query: 161 LVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            +G+ES I E+ S L L  +   + VGI+GIGGIGK+T A A+++ I+  FEG  F+ +I
Sbjct: 197 PIGLESQILEVTSLLGLDSNERVSMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDI 256

Query: 220 RDES------------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQI 259
           R                     EK   + +++  ++  +RRL R KVL++  ++  ++Q+
Sbjct: 257 RKREINHDLARLQEALLSDILGEKDIKVGDVYRGMSIIKRRLQRKKVLLILDNVDKVQQL 316

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
              +G    F  GS+VI+TTRD  LL  H    +  V+EVK+L    +L LFS +AF   
Sbjct: 317 QAFVGH-GWFGFGSKVIVTTRDKHLLATHG---IVKVYEVKQLKSEKALELFSWHAFKNK 372

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                +++++  ++ Y +G+PLAL+V+GS+L G S   W+S++ K K +   DI ++LKV
Sbjct: 373 KIDPCYVDIAKRLVTYCHGLPLALEVIGSHLFGKSLGVWKSSLVKYKGVLRKDIHEILKV 432

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKI 438
           SYD L+++E+ IFLD ACFF   +   V   L    F A+ GI  L+ KSL+ I  N  +
Sbjct: 433 SYDDLEEDEKGIFLDIACFFNSYEISYVKELLYLHGFHAEDGIQVLIDKSLMKIDINGCV 492

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG----INLDSLKEL 494
            MHDL+Q MG EIVRQES  +PG+RSRLW  +DI QVL EN    T      NL   +++
Sbjct: 493 RMHDLIQSMGREIVRQESTLEPGRRSRLWFSDDIVQVLEENKGTDTVEVIIANLRKGRKV 552

Query: 495 -----YLGGCSNLKRF----------PEISCN-IEDLDLKETAIEELPSSIGNLSRLVDL 538
                  G   NLK            P+I  N ++ LD        LPS   N   L  L
Sbjct: 553 KWCGKAFGPMKNLKILIVRNAQFSNGPQILPNSLKVLDWSGYPSSSLPSKF-NPKNLAIL 611

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF----E 594
           +L   S LK   S L   + L  L+  GC  L KLP    +L  + YL     D+     
Sbjct: 612 NLPE-SHLKWFQS-LKVFEMLSFLDFEGCKFLTKLP----SLSRVPYLGALCLDYCINLI 665

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSL 637
           +I  S+  L  L     Q C RL+SL     LP   ++  R C+ L
Sbjct: 666 RIHDSVGFLGSLVLFSAQGCSRLESLVPYINLPSLETLDLRGCSRL 711



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 23/165 (13%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T LP+   +  L  L L  C NL R       I D             S+G L  LV   
Sbjct: 642 TKLPSLSRVPYLGALCLDYCINLIR-------IHD-------------SVGFLGSLVLFS 681

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
              CS L+S+   + NL SL  L+L GC +L+  PE +G +E+++ + L + D  ++P +
Sbjct: 682 AQGCSRLESLVPYI-NLPSLETLDLRGCSRLDNFPEVLGLMENIKDVYLDQTDLYQLPFT 740

Query: 600 MKQLSKLSDLRLQNCKRLQSLPE--LPCGSSIHARHCTSLKTLSN 642
           +  L  L  L L+ C+R+  LP   LP    I    C   ++  N
Sbjct: 741 IGNLVGLQRLYLRGCQRMIQLPSYILPKVEIITTYGCRGFRSSEN 785



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 28/178 (15%)

Query: 398 FFKGNDQYLVMNFLD--ACRFSAKI-GISRL--VGKSLVTISNNKITMHDLLQEMGGEIV 452
           +F+    + +++FLD   C+F  K+  +SR+  +G   +    N I +HD +  +G  ++
Sbjct: 620 WFQSLKVFEMLSFLDFEGCKFLTKLPSLSRVPYLGALCLDYCINLIRIHDSVGFLGSLVL 679

Query: 453 RQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISC-- 510
                                Q  +   SL   INL SL+ L L GCS L  FPE+    
Sbjct: 680 FSA------------------QGCSRLESLVPYINLPSLETLDLRGCSRLDNFPEVLGLM 721

Query: 511 -NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            NI+D+ L +T + +LP +IGNL  L  L L  C  +  + S +  L  +  +   GC
Sbjct: 722 ENIKDVYLDQTDLYQLPFTIGNLVGLQRLYLRGCQRMIQLPSYI--LPKVEIITTYGC 777


>gi|13509219|emb|CAC35329.1| N1-C protein [Linum usitatissimum]
          Length = 1120

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 236/756 (31%), Positives = 374/756 (49%), Gaps = 130/756 (17%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S+  +   +P  ++++FLSFRG DVR  F  HL  +L R K  TF D++ L +G  I P
Sbjct: 17  SSADLTPTSLPSGEYEIFLSFRGLDVRKTFADHLYTSLVRSKFRTFRDEEELEKGGAIGP 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDPSD 115
           S+  AI  SKI I I +  YASS+WCL EL K++E     G      I++PVF  VDP D
Sbjct: 77  SIIRAITESKIYIPILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRD 136

Query: 116 AGYCPSLGWMGIFDIPTS----ESVL-------------------IEGNVNDISKKLSD- 151
             +  S  +   F+        E+VL                    +G+ + I K L++ 
Sbjct: 137 VRHTESGSYKEAFEQHRQKHDPETVLEWKEALQEVGKMKGYHVTESDGHGSIIDKILTEV 196

Query: 152 -LFPSDN----KDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            L    N     D+LVG++S++ E+   L L  ST    +GI G+GG+GKTT+A A+Y  
Sbjct: 197 ELHLGANYTLVTDELVGIDSLVDEVVGLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDK 256

Query: 206 ISSHFEGSYFMQNIRDE-SEKVG----------GL----------ANIHLNFERRRLSRM 244
           +S+ FE  YF++NIRD  SEK G          G+          A+  +   R R+ R 
Sbjct: 257 VSTKFERCYFLENIRDTLSEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRD---VQLLKNHRGSRVGHVFEVKE 301
           K+LIV  D+ +  Q D ++G+L+ F   SR +ITTRD   ++LL+ ++      +FE++E
Sbjct: 317 KLLIVLDDVDEKFQFDDVLGKLNNFSTNSRFLITTRDARGLELLQEYK------MFELQE 370

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
           +S + SLTLF+++AF  + P   +  LS   ++ A G+PL ++V+GS L  M +  WE  
Sbjct: 371 MSPDHSLTLFNKHAFDVDCPPKDYAILSKEFVQAAAGLPLYIKVIGSLLFRMDKIFWEEK 430

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
           + + K++    +Q+ LK+SY+ L   E+ IFLD AC+F G+ +   +   + C    +  
Sbjct: 431 LEEFKKISPTKVQERLKISYNELTYNEKQIFLDIACYFIGSVKIEPILMWNDCDLYPEST 490

Query: 422 ISRLVGKSLVTISN--------NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           I  L  +SL+ +          N   MHD ++++G  IVR+E+ + P KRSR+W  +D  
Sbjct: 491 IRSLTQRSLIKLQRSEMKGDDVNTFQMHDHVRDLGRAIVREENNQKPYKRSRIWSNKDAI 550

Query: 474 QVLNENTS----------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNIED 514
            +L                     + T   L+ L  L     SN +    F ++  N+  
Sbjct: 551 DMLKHKKGTDCVEVLTVDMEGEDLILTNKELEKLTRLRYLSVSNARLAGDFKDVLPNLRW 610

Query: 515 LDLKETAIEELPSSIGNLSRLVDLDLTNCS---GLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           L L   + + +P+ +  L++LVDL+L +CS   G K  +  L     L+ + L  C  L+
Sbjct: 611 LRLH--SCDSVPTGL-YLNKLVDLELVDCSVRDGWKGWNE-LKVAHKLKAVTLERCFHLK 666

Query: 572 KLPE----------------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDL 609
           K+P+                      +IGN +SL +  +A+    KI   + +L  L  L
Sbjct: 667 KVPDFSDCGDLEFLNFDGCRNMRGEVDIGNFKSLRFFQIADTKITKIKGEIGRLLNLKYL 726

Query: 610 RLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSST 645
            + +     SL E+P G S      +SLK LS + T
Sbjct: 727 IVDD----SSLKEVPAGIS----KLSSLKWLSLTLT 754


>gi|356499237|ref|XP_003518448.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1176

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 268/765 (35%), Positives = 379/765 (49%), Gaps = 120/765 (15%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPS 61
           SSS+S     H    VFLSFRG+D R +F  HL AAL R+ I  F DDK L +G+ I+  
Sbjct: 6   SSSNSWRWTYH----VFLSFRGEDTRLDFTDHLYAALVRKGIIAFRDDKQLEKGDAIAEE 61

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS 121
           L  AIE S  +IVI SE YASS WCL+EL KILES    G+ V PVFY V P +  +  +
Sbjct: 62  LPKAIEESLGAIVILSENYASSSWCLDELNKILESNRVLGREVFPVFYGVSPGEVQHQKT 121

Query: 122 LGWMGIF-------------------------DIPTSESV-------LIEGNVNDISKKL 149
             +   F                          IP  ES        LIE  V  +  KL
Sbjct: 122 QSFYEAFKKHERRSGKDTEKVQKWRDSLKELGQIPGWESKHYQHQTELIENIVESVWTKL 181

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
               PS N D L+G+ S +K+++S L   S +   +GIWG+GGIGKTT+A  ++  I   
Sbjct: 182 RPKMPSFN-DGLIGIGSRVKKMDSLLSIESEDVRFIGIWGMGGIGKTTVARVVFQKIKDQ 240

Query: 210 FEGSYFMQNIRDESEKVGGLANI------HLNFERRR--------------LSRMKVLIV 249
           F+ S F+ N+R+ S +  G+  +      HL  +                 LS  KVL+V
Sbjct: 241 FDVSCFLDNVREISRETNGMLRLQTKLLSHLAIKGLEIIDLDEGKNTIINLLSEKKVLLV 300

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ D  Q+  L  R++ F  GSRVIITTRD Q+L +H    V   + ++ L+ ++SL 
Sbjct: 301 LDDVDDTSQLGNLAKRVEWFGRGSRVIITTRDTQVLISH---GVVENYNIEFLNSDESLQ 357

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           L S+ AF ++ P   +LELS +V K+A G+PLAL++LGS+L G SE +W   V+ +K + 
Sbjct: 358 LLSQKAFKRDEPLEHYLELSKVVAKHAGGLPLALELLGSFLCGRSEFQWREVVDMIKEVS 417

Query: 370 HMDI-QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
              I  K L++SY+GL    + +FLD ACFFKG  + L    L+ C     +GI  LV K
Sbjct: 418 ASHIVMKSLRISYNGLPRCHKALFLDIACFFKGRVKELATQTLEICDRYPAVGIELLVEK 477

Query: 429 SLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN---ENTSLPTG 485
           SL T     I MHDLLQE   EIV +ES  D GKRSRLW  ED  QVL    EN S+  G
Sbjct: 478 SLATYDGFTIGMHDLLQETAREIVIEESHVDAGKRSRLWSLEDTNQVLKYSRENESI-EG 536

Query: 486 INLDS------------------LKELYLGGCSNLKRFPEISC-NIEDLDLKETAIEELP 526
           I L+S                  L+ L +     L R  +  C +++ L   + ++E LP
Sbjct: 537 IALNSPEKDEANWDPEAFSRMYNLRLLIISFPIKLARGLKCLCSSLKFLQWNDFSLETLP 596

Query: 527 SSIGNLSRLVDLDLTNCSGLKSV---SSRLCNLK--------------------SLRRLN 563
             +  L  LV+L + + S +K++   +     LK                     L R+ 
Sbjct: 597 LGV-QLDELVELKMYS-SKIKNIWNGNQAFAKLKFIDLSYSEDLIQTPIVSGAPCLERML 654

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           L GC+ L ++   +G  + L  L +   K+ + +P  + ++  L +L L  C +++ LPE
Sbjct: 655 LIGCINLVEVHPSVGQHKRLVVLCMKNCKNLQIMPRKL-EMDSLEELILSGCSKVKKLPE 713

Query: 623 ----LPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
               +   S +   +C +L  L NS   L    K     N S CS
Sbjct: 714 FGKNMKSLSLLSVENCINLLCLPNSICNLKSLRK----LNISGCS 754



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 20/136 (14%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P  + +DSL+EL L GCS +K+ PE   N++ L L                    L + 
Sbjct: 688 MPRKLEMDSLEELILSGCSKVKKLPEFGKNMKSLSL--------------------LSVE 727

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           NC  L  + + +CNLKSLR+LN+SGC +L  LP  +   ESLE L+++     +I  S  
Sbjct: 728 NCINLLCLPNSICNLKSLRKLNISGCSRLSTLPNGLNENESLEELDVSGTAIREITLSKV 787

Query: 602 QLSKLSDLRLQNCKRL 617
           +L KL +L     K L
Sbjct: 788 RLEKLKELSFGGRKEL 803



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 40/207 (19%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           LP  I NL SL++L + GCS L   P     + ++E+LD+  TAI E+  S   L +L +
Sbjct: 735 LPNSICNLKSLRKLNISGCSRLSTLPNGLNENESLEELDVSGTAIREITLSKVRLEKLKE 794

Query: 538 LDLTNCSGLKSVSSRLCNL-----KSLRRLNLSGC--------------------LKLEK 572
           L      G K ++    NL     K +R+ NL                       L  E 
Sbjct: 795 LSF---GGRKELAPNSQNLLLWISKFMRQPNLKESTMPPLSSLLALVSLDLSYCDLNDES 851

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSS-MKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            P  +G+L  L+ L+L+  +F   P+  +  LS L +L   +C RL+SLP LP     ++
Sbjct: 852 FPSHLGSLSLLQDLDLSGNNFVNPPAQCIINLSMLQNLSFNDCPRLESLPVLPPNLQGLY 911

Query: 631 ARHCTSLKTLSNSSTLLTRSSKHWDIF 657
           A +C  LK  +    +L      W I+
Sbjct: 912 ANNCPKLKPFNLDEEML------WKIY 932


>gi|357449875|ref|XP_003595214.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355484262|gb|AES65465.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1362

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 248/735 (33%), Positives = 375/735 (51%), Gaps = 103/735 (14%)

Query: 1   MASSSSSINMI----PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRG 55
           MASSS S + +        +DVF++FRG+D R+NF   L  AL R+ I  F DD  L +G
Sbjct: 1   MASSSKSTSALVTSSKKNHYDVFVTFRGEDTRNNFTDFLFDALERKDIFAFRDDTNLQKG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
             I   L  AIEGS++ + +FS  YASS WCL EL KI E     G+ V+PVFY VDPS+
Sbjct: 61  ESIGSELLRAIEGSQVFVAVFSRYYASSTWCLEELEKICECVQVPGKHVLPVFYDVDPSE 120

Query: 116 AGYCPSL---------------------------------GWMGIFDIPTSESVLIEGNV 142
                 +                                 GW  + D P          +
Sbjct: 121 VRKQSGIYHEAFVKHEQRFQQDLQKVSRWREALKQVGSIAGW-DLRDKPQC------AEI 173

Query: 143 NDISKKLSDLF---PSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTI 198
             I +K+ ++     S N   LVG+ S I+ +++ LL  S +    +GIWG+GGIGKTT+
Sbjct: 174 KKIVQKIMNILECKSSCNSKDLVGINSRIEALKNHLLLDSVDGVRAIGIWGMGGIGKTTL 233

Query: 199 ASAIYSNISSHFEGSYFMQNIRD---------ESEKVGGLANIHLNFE------------ 237
           A  +Y  IS  F+ S F+ ++           E++K      + +               
Sbjct: 234 ALDLYGQISHRFDASCFIDDVSKIYRLHDGPLEAQKQIIFQTLGIEHHQICNRYSATYLI 293

Query: 238 RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVF 297
           R RL   + L++  ++  ++Q++ +   L+    GSR+II +RD  +LK +    V  V+
Sbjct: 294 RHRLCHERALLILDNVDQVEQLEKIDVHLEWLGAGSRIIIISRDEHILKKYG---VDVVY 350

Query: 298 EVKELSYNDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE 356
           +V  L++ DS  LF R AF  +N   + +  L+N +++YANG+PLA++V+GS+L G +  
Sbjct: 351 KVPLLNWRDSYKLFCRKAFKVENIIMSNYQNLANEILRYANGLPLAIKVMGSFLFGCNVT 410

Query: 357 EWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF 416
           EW+SA+ +L+  P  D+  VL++S+DGL   E+ IFLD ACFF    +  V N L+ C F
Sbjct: 411 EWKSALARLRESPDKDVIDVLQLSFDGLKHTEKEIFLDIACFFNSECEKYVKNILNCCGF 470

Query: 417 SAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
            A IG+  L+ KSL++I+   I MH LL+E+G +IV+  S  DP K SRLW  E +Y V+
Sbjct: 471 HADIGLRVLINKSLISINGQNIEMHSLLEELGRKIVQNSSSNDPRKWSRLWSTEQLYDVI 530

Query: 477 NENTSLPT-GINLDSLKEL---YLGGCSNLKR------------FPE-ISCNIEDLDLKE 519
                     I L   +E+   +L   SNL+             FP  +S  +  ++  +
Sbjct: 531 MAKMEKHVEAIVLKYTEEVDAEHLSKMSNLRLLIIVNHTATISGFPSCLSNKLRYVEWPK 590

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
              + LP+S  + + LV+L L   S +K++      L +LRRL+LS   KLEK+  + G 
Sbjct: 591 YPFKYLPTSF-HPNELVELILDG-SNIKNLWKNKKYLPNLRRLDLSDSRKLEKI-MDFGE 647

Query: 580 LESLEYLNL--AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELPCGSS---IHARH 633
             +LE+LNL   E+  E  P S+  L KL  L L++C  L S+P  + C SS   ++ R 
Sbjct: 648 FPNLEWLNLEGCERLVELDP-SIGLLRKLVYLNLKDCYNLVSIPNNIFCLSSLEYLNMRC 706

Query: 634 CTSLKTLSNSSTLLT 648
           C   K  +NS  L T
Sbjct: 707 C--FKVFTNSRHLTT 719



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 2/81 (2%)

Query: 549 VSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            ++ L +L  LR +++S C +L ++P+ I  L  +E LNL   DF  +PS +++LSKL  
Sbjct: 752 TNTYLHSLYCLREVDISFC-RLSQVPDTIECLHWVERLNLGGNDFATLPS-LRKLSKLVY 809

Query: 609 LRLQNCKRLQSLPELPCGSSI 629
           L LQ+CK L+SLP+LP  ++I
Sbjct: 810 LNLQHCKLLESLPQLPFPTAI 830


>gi|13509236|emb|CAC35338.1| Nbi-D protein [Linum usitatissimum]
          Length = 1108

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 234/749 (31%), Positives = 370/749 (49%), Gaps = 124/749 (16%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S+  +   +P  ++++FLSFRG DVR  F  HL  +L R K  TF D++ L +G  I P
Sbjct: 17  SSADLTPTSLPSGEYEIFLSFRGPDVRKTFADHLYTSLVRSKFRTFRDEEELRKGGTIGP 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDPSD 115
           S+  AI  SKI I I +  YASS+WCL EL K++E     G      I++PVF  VDP D
Sbjct: 77  SIIRAITESKIYIPILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRD 136

Query: 116 AGYCPSLGWMGIFDIPTS----ESVL-------------------IEGNVNDISKKLSD- 151
             +  S  +   F+  +     E+VL                    +G+ + I K L++ 
Sbjct: 137 VRHTESGSYKEAFEQHSQKHDPETVLEWKEALQEVGKMKGYHVTESDGHGSIIDKILTEV 196

Query: 152 -LFPSDN----KDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            L    N     D+LVG++S + E+   L L  ST    +GI G+GG+GKTT+A A+Y  
Sbjct: 197 ELHLGANYTLVTDELVGIDSHVDEVVRLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDK 256

Query: 206 ISSHFEGSYFMQNIRD-----------ESEKVGGL----------ANIHLNFERRRLSRM 244
           +S+ FE  YF++NIRD           +++ + G+          A+  +   R R+ R 
Sbjct: 257 VSTKFERCYFLENIRDTLLEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+LIV  D+ +  Q D ++G+ + F   SR +ITTRDV+ L+  R  ++   FE++E+S 
Sbjct: 317 KLLIVLDDVDEKFQFDDVLGKFENFSTDSRFLITTRDVRGLELLRECKM---FELQEMSP 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SLTLF+++AFG + P   +  LS    + A G+PL ++V+GS L  M +  WE  + +
Sbjct: 374 DHSLTLFNKHAFGVDSPQEDYAILSKDFSQAAAGLPLYIKVIGSLLYRMDKIFWEEKLEE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK++    +Q+ LK+SY+ L   E+ IFLD AC+F  + +   M   + C F ++  I  
Sbjct: 434 LKKISPTKVQERLKISYNELTHTERQIFLDIACYFIESFKIGPMLMWNDCDFYSESTIRS 493

Query: 425 LVGKSLVTISNNKIT--------MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           L  +SL+ +    I         MHD ++++G  IVR+E  ++P KRSR+W  +D   +L
Sbjct: 494 LTQRSLIKLQKPYIKGADIDMFWMHDHVRDLGRAIVREEKNQNPYKRSRIWSNKDAVDML 553

Query: 477 NENTS----------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDL 517
                                + T    + L  L     SN +    F ++  N+  L L
Sbjct: 554 KHKKGTDWVEILEVDMKFEDFMLTDKEFEKLTRLRYLKVSNGRLAGDFKDVLPNLRWLRL 613

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCS---GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           K  + + +P+ +  L +LV L L +CS   G K  +  L   + L+ ++L  C  L+K+P
Sbjct: 614 K--SCDSIPTGL-YLKKLVTLQLVDCSVRDGWKGWNE-LKVARKLKAVSLKRCFHLKKVP 669

Query: 575 E----------------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           +                      +IGN +SL YL ++     KI   + +L  L  L   
Sbjct: 670 DFSDCEDLECLDFEECRNMRGEVDIGNFKSLRYLLISNTKITKIKGEIGRLLNLKYLLAS 729

Query: 613 NCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           +     SL E+P G S      +SLK LS
Sbjct: 730 D----SSLKEVPAGIS----KLSSLKNLS 750


>gi|399920205|gb|AFP55552.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1144

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 243/731 (33%), Positives = 366/731 (50%), Gaps = 131/731 (17%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISP 60
           ASS SS       K+DVFLSFRG+D R  F  +L   L R+ I TF DD +L RG  ISP
Sbjct: 9   ASSGSSCPW----KYDVFLSFRGEDTRKGFTDYLYHELERQGIRTFRDDPQLERGTAISP 64

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L +AIE S+ +IV+ S  YA+S WCL EL KILE   + G I+ P+FY VDPS      
Sbjct: 65  ELLTAIEQSRFAIVVLSPKYATSTWCLLELSKILECMEERGTIL-PIFYEVDPSHVRHQR 123

Query: 117 ----------------------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDL 152
                                 G+  +L  +      TSE    E   +++I + L S +
Sbjct: 124 GSFAEAFQEHEEKFGEGNKEVEGWRDALTKVASLAGWTSEDYRYETQLISEIVQALWSKV 183

Query: 153 FPS----DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
            PS     + ++L G++S ++E++  L   + +   +GIWG+GGIGKTT+A  +Y  IS 
Sbjct: 184 HPSLTVFGSSEKLFGMDSKLEEMDVLLDKEANDVRFIGIWGMGGIGKTTLAGLVYEKISH 243

Query: 209 HFEGSYFMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKVL 247
            FE   F+ N+R+ S+   GL ++                       N  +R +    VL
Sbjct: 244 QFEVCIFLANVREVSKTTHGLVDLQKQILSQILKEENVQVWNVYSGRNMIKRCVCNKAVL 303

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+   +Q++  +G  D F   SR+IITTRD ++L  H    V   +E+K ++ +++
Sbjct: 304 LVLDDVDQSEQLENFVGEKDCFGLRSRIIITTRDRRVLVTHG---VEKPYELKGINEHEA 360

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LFS  AF +  P   + EL    + YA G+PLAL++LGS+LKG + +EW SA+ KL++
Sbjct: 361 LQLFSWKAFRKCEPEEDYAELCKSFVTYAGGLPLALKILGSFLKGRTPDEWNSALAKLQQ 420

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
            P + + K+LK+S+DGLD+ E+ IFLD ACF +      ++  +D+     +I    L  
Sbjct: 421 TPDITVFKILKMSFDGLDEMEKKIFLDIACFRRLYSNEFMIELVDSSDPCNRITRRVLAE 480

Query: 428 KSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT-- 484
           KSL+TI S++++ +HDL+ EMG EIVRQE+ ++ G RSRL   +DI+ V  +NT      
Sbjct: 481 KSLLTISSDSQVHVHDLIHEMGCEIVRQEN-EESGGRSRLCLRDDIFHVFTKNTGTEAIE 539

Query: 485 GINLD------------------SLKELYLGG--------C-SNLKRFPEIS-------- 509
           GI LD                   LK LY+          C  N  RF   S        
Sbjct: 540 GILLDLAELEEADWNLEAFSKMCKLKLLYIHNLRLSVGPKCLPNALRFLSWSWYPSKSLP 599

Query: 510 -C----NIEDLDLKETAIEELPSSIGNLSRLVDLDLT----------------------- 541
            C     + +L L  + I+ L + I  L +L  +DL+                       
Sbjct: 600 PCFQPEELTELSLVHSNIDHLWNGIKYLGKLKSIDLSYSINLTRTPDFTGISNLEKLILE 659

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
            C+ L  +   +  LK L+  N   C  +++LP E+ N+E LE  +++     + IP  +
Sbjct: 660 GCTNLVKIHPSIALLKRLKIWNFRNCKSIKRLPSEV-NMEFLETFDVSGCSKLKMIPEFV 718

Query: 601 KQLSKLSDLRL 611
            Q+ +LS LRL
Sbjct: 719 GQMKRLSKLRL 729



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 113/238 (47%), Gaps = 45/238 (18%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LK 518
           KR ++W+  +   +      LP+ +N++ L+   + GCS LK  PE    ++ L    L 
Sbjct: 675 KRLKIWNFRNCKSI----KRLPSEVNMEFLETFDVSGCSKLKMIPEFVGQMKRLSKLRLG 730

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNCSGLKSVSSR------------------------- 552
            TA+E+LPSSI   S  LV+LDL+     +   SR                         
Sbjct: 731 GTAVEKLPSSIERWSESLVELDLSGIVIREQPYSRFLKQNLIASSLGLFPRKSPHPLIPL 790

Query: 553 LCNLK---SLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
           L +LK   SL  L L+ C   E  +P +IG+L SL  L L   +F  +P+S+  LSKL  
Sbjct: 791 LASLKHFSSLTELKLNDCNLFEGDIPNDIGSLSSLRSLGLRGNNFVSLPASIHLLSKLEY 850

Query: 609 LRLQNCKRLQSLPELPC-GSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS-NCSN 664
           + ++NCKRLQ LPEL   G      +CT+L+   +   L   ++      NFS NC N
Sbjct: 851 INVENCKRLQQLPELSAIGVLSRTDNCTALQLFPDPPDLCRITT------NFSLNCVN 902


>gi|6449046|gb|AAF08790.1| downy mildew resistance protein RPP5 [Arabidopsis thaliana]
          Length = 1361

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 231/678 (34%), Positives = 334/678 (49%), Gaps = 95/678 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA+SSSS       ++DVF SF G DVR  F+SHL  AL  + I TFID  + R   I+P
Sbjct: 1   MAASSSS----GRRRYDVFPSFSGVDVRKTFLSHLLKALDGKSINTFIDHGIERSRTIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L SAI  ++ISIVIFS+ YASS WCLNELV+I +  N  GQ+V+PVFY VDPS+     
Sbjct: 57  ELISAIREARISIVIFSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQT 116

Query: 117 --------GYCP----------SLGWM-GIFDIPT----------SESVLIEGNVNDISK 147
                     C              W+  + DI            +E+ ++E   ND+S 
Sbjct: 117 GEFGKVFEKTCEVSKDKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKISNDVSN 176

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           KL  +  S   D  VG+E+ I+ I+S L   S E   VGIWG  GIGK+TI  A++S +S
Sbjct: 177 KL--ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALFSQLS 234

Query: 208 SHFEGSYFMQNIRDESEKVGG---------LANI---------HLNFERRRLSRMKVLIV 249
           S F    F+         V G         L+ I         H     +RL+  KVLI+
Sbjct: 235 SQFHHRAFLTYKSTSGSDVSGMKLSWQKELLSEILGQKDIKIEHFGVVEQRLNHKKVLIL 294

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ +L+ +  L+G+ + F  GSR+I+ T+D QLLK H    +  V+EVK  S   +L 
Sbjct: 295 LDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQLLKAHE---IDLVYEVKLPSQGLALK 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           + S+ AFG++ P   F EL+  V +    +PL L VLGS LKG  ++EW   + +L+   
Sbjct: 352 MISQYAFGKDSPPDDFKELAFEVAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDS 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              I++ L+V YD L+ + + +F   ACFF G     V   L+       +G++ L  +S
Sbjct: 412 DDKIEETLRVGYDRLNKKNRELFKCIACFFNGFKVSNVKELLE-----DDVGLTMLAEES 466

Query: 430 LVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINL 488
           L+ I+    I MH+LL+++G EI R +S  +PGKR  L + EDI +VL E T   T + +
Sbjct: 467 LIRITPVGYIEMHNLLEKLGREIDRAKSKGNPGKRQFLTNFEDIREVLTEKTGTETLLGI 526

Query: 489 DSLKELYLGGCSNL---KRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
                 YL   S L   K F  +  N++ L++   +   LP S+    R           
Sbjct: 527 RLPHPGYLTTRSFLIDEKSFKGMR-NLQYLEIGYWSDGVLPQSLVYFPR----------- 574

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
                        L+RL    C  L++LP      E L  L +     EK+    + L  
Sbjct: 575 ------------KLKRLWWDNC-PLKRLPSNF-KAEYLVELRMVNSKLEKLWDGTQPLGS 620

Query: 606 LSDLRLQNCKRLQSLPEL 623
           L  + L N  +L+ +P+L
Sbjct: 621 LKKMDLYNSYKLKEIPDL 638



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 23/160 (14%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL+ L L GCS+L+ FP IS NI  L L+ TAIEE+P  +   ++L  L L 
Sbjct: 986  LPTDVNLSSLETLDLSGCSSLRTFPLISTNIVCLYLENTAIEEIP-DLSKATKLESLILN 1044

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA------------ 589
            NC  L ++ S + NL++LRRL ++ C  LE LP ++ NL SLE L+L+            
Sbjct: 1045 NCKSLVTLPSTIGNLQNLRRLYMNRCTGLELLPTDV-NLSSLETLDLSGCSSLRTFPLIS 1103

Query: 590  ---------EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                         E++P  ++  ++L+ LR+  C+RL+++
Sbjct: 1104 TRIECLYLENTAIEEVPCCIEDFTRLTVLRMYCCQRLKNI 1143



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 53/86 (61%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL+ L L GCS+L+ FP IS  IE L L+ TAIEE+P  I + +RL  L + 
Sbjct: 1076 LPTDVNLSSLETLDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDFTRLTVLRMY 1135

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L SL   + + C
Sbjct: 1136 CCQRLKNISPNIFRLTSLTLADFTDC 1161



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDL-KETAIEELPSSIGNLSRLVDLDLTNC 543
           +L SLKE+ L   +NLK  P++S   N+E+LDL    ++  LPSSI N ++L+ LD++ C
Sbjct: 755 SLGSLKEMNLRYSNNLKEIPDLSLAINLEELDLFGCVSLVTLPSSIQNATKLIYLDMSEC 814

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
             L+S  + + NLKSL  L+L+GC  L   P
Sbjct: 815 ENLESFPT-VFNLKSLEYLDLTGCPNLRNFP 844



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 79/179 (44%), Gaps = 18/179 (10%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE-------LPSSIGNLS 533
           S PT  NL SL+ L L GC NL+ FP I        L  T +         +     N +
Sbjct: 819 SFPTVFNLKSLEYLDLTGCPNLRNFPAIKMGCAWTRLSRTRLFPEGRNEIVVEDCFWNKN 878

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
               LD  +C     +    C  +S  L  LN+SGC KLEKL E I +L SLE ++L+E 
Sbjct: 879 LPAGLDYLDC----LMRCMPCEFRSEQLTFLNVSGC-KLEKLWEGIQSLGSLEEMDLSES 933

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTL 646
           +  K    + + + L  L L  CK L +LP     L     ++   CT L+ L     L
Sbjct: 934 ENLKELPDLSKATNLKLLCLSGCKSLVTLPSTIGNLQNLRRLYMNRCTGLEVLPTDVNL 992



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 50/230 (21%)

Query: 463  RSRLWHPEDIYQVLNE----NTSLPTGIN-LDSLKE-------------LYLGGCSNLKR 504
            R+RL+ PE   +++ E    N +LP G++ LD L               L + GC   K 
Sbjct: 857  RTRLF-PEGRNEIVVEDCFWNKNLPAGLDYLDCLMRCMPCEFRSEQLTFLNVSGCKLEKL 915

Query: 505  FPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
            +  I    ++E++DL E+  ++ELP  +   + L  L L+ C  L ++ S + NL++LRR
Sbjct: 916  WEGIQSLGSLEEMDLSESENLKELPD-LSKATNLKLLCLSGCKSLVTLPSTIGNLQNLRR 974

Query: 562  LNLSGCLKLEKLPEEIGNLESLEYLNLA---------------------EKDFEKIPSSM 600
            L ++ C  LE LP ++ NL SLE L+L+                         E+IP  +
Sbjct: 975  LYMNRCTGLEVLPTDV-NLSSLETLDLSGCSSLRTFPLISTNIVCLYLENTAIEEIP-DL 1032

Query: 601  KQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTL 646
             + +KL  L L NCK L +LP     L     ++   CT L+ L     L
Sbjct: 1033 SKATKLESLILNNCKSLVTLPSTIGNLQNLRRLYMNRCTGLELLPTDVNL 1082



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 491 LKELYLGGCSNLKRFPE--ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKS 548
           LK +    C  LKR P    +  + +L ++ + +E+L     +L  L +++L   + LK 
Sbjct: 714 LKSVLWTNCP-LKRLPSNFKAEYLVELIMEYSELEKLWDGTQSLGSLKEMNLRYSNNLKE 772

Query: 549 VSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLS 607
           +   L    +L  L+L GC+ L  LP  I N   L YL+++E ++ E  P+    L  L 
Sbjct: 773 IPD-LSLAINLEELDLFGCVSLVTLPSSIQNATKLIYLDMSECENLESFPTVF-NLKSLE 830

Query: 608 DLRLQNCKRLQSLPELPCGSS 628
            L L  C  L++ P +  G +
Sbjct: 831 YLDLTGCPNLRNFPAIKMGCA 851


>gi|359486078|ref|XP_003633382.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 441

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 171/429 (39%), Positives = 243/429 (56%), Gaps = 57/429 (13%)

Query: 13  HP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           HP K++VFLSFRG+D R +F  HL+ ALCR  I TFIDD+L RG +IS +L  AIE S++
Sbjct: 17  HPWKYEVFLSFRGEDTRKSFTDHLHEALCRYGINTFIDDQLRRGEQISSALLQAIEESRL 76

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPS----- 121
           SI+IFSE YASS WCL+EL KILE     G    PVFY VDPS        Y  +     
Sbjct: 77  SIIIFSEHYASSSWCLDELTKILECVKVGGHTAFPVFYNVDPSHVRKQTGSYGVAFTKHE 136

Query: 122 ----------LGWMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                     L W     + +           ES +I+  V+ I  +L D   S N + L
Sbjct: 137 QVYRDNMEKVLKWREALTVASGLSGWDSRDRHESEIIKKIVSKILNELVDA-SSSNMENL 195

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S I+++ S L  GS +   VGIWG+ GIGKT IA  +Y  I + FEG  F+ N+ +
Sbjct: 196 VGMDSRIQDLVSLLCIGSDDVRMVGIWGVAGIGKTAIAKVVYQKICTQFEGCCFLSNVSE 255

Query: 222 ESEKVGGLANIHL---------------------NFERRRLSRMKVLIVFYDLTDLKQID 260
           +++K   LANI +                     NF ++ L  MK LIV  D+   +Q++
Sbjct: 256 KTQK-SDLANIQMELLSQILWEGNLNTRIFNRGINFIKKALHSMKALIVLDDVNHRQQLE 314

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L G  + F  GSR+IITTR+ +LL       V   +E KEL  +++L LF ++AF    
Sbjct: 315 ALAGNHNWFGRGSRIIITTRERRLLIE---KEVDATYEAKELDEDEALMLFRQHAFKHKP 371

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   F++L +  + Y  G+PLAL++LG +L   S++EWES + +LKR+P+ ++Q VL+ S
Sbjct: 372 PIEDFVQLCDRALNYTKGIPLALKILGCFLYNRSKKEWESELERLKRIPNKEVQDVLRYS 431

Query: 381 YDGLDDEEQ 389
           +DGLDD ++
Sbjct: 432 FDGLDDNQK 440


>gi|13509229|emb|CAC35334.1| N2-D protein [Linum usitatissimum]
          Length = 1108

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 234/749 (31%), Positives = 370/749 (49%), Gaps = 124/749 (16%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S+  +   +P  ++++FLSFRG DVR  F  HL  +L R K  TF D++ L +G  I P
Sbjct: 17  SSADLTPTSLPSGEYEIFLSFRGPDVRKTFADHLYTSLVRSKFRTFRDEEELRKGGTIGP 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-----QIVVPVFYLVDPSD 115
           S+  AI  SKI I I +  YASS+WCL EL K++E     G      I++PVF  VDP D
Sbjct: 77  SIIRAITESKIYIPILTPNYASSKWCLQELAKMVECWKSGGGAKGQHIILPVFLFVDPRD 136

Query: 116 AGYCPSLGWMGIFDIPTS----ESVL-------------------IEGNVNDISKKLSD- 151
             +  S  +   F+  +     E+VL                    +G+ + I K L++ 
Sbjct: 137 VRHTESGSYKEAFEEHSQKHDPETVLEWKEALQEVGKMKGYHVTESDGHGSIIDKILTEV 196

Query: 152 -LFPSDN----KDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
            L    N     D+LVG++S + E+   L L  ST    +GI G+GG+GKTT+A A+Y  
Sbjct: 197 ELHLGANYTLVTDELVGIDSHVDEVVRLLNLDSSTSEKIIGIHGMGGLGKTTLAKAVYDK 256

Query: 206 ISSHFEGSYFMQNIRD-----------ESEKVGGL----------ANIHLNFERRRLSRM 244
           +S+ FE  YF++NIRD           +++ + G+          A+  +   R R+ R 
Sbjct: 257 VSTKFERCYFLENIRDTLLEKNGVSILQNKIISGILRKDFNEAKNASDGIRIIRDRVCRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+LIV  D+ +  Q D ++G+ + F   SR +ITTRDV+ L+  R  ++   FE++E+S 
Sbjct: 317 KLLIVLDDVDEKFQFDDVLGKFENFSTDSRFLITTRDVRGLELLRECKM---FELQEMSP 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SLTLF+++AFG + P   +  LS    + A G+PL ++V+GS L  M +  WE  + +
Sbjct: 374 DHSLTLFNKHAFGVDSPQEDYAILSKDFSQPAAGLPLYIKVIGSLLYRMDKIFWEEKLEE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK++    +Q+ LK+SY+ L   E+ IFLD AC+F  + +   M   + C F ++  I  
Sbjct: 434 LKKISPTKVQERLKISYNELTHTERQIFLDXACYFIESFKIGPMLMWNDCDFYSESTIRS 493

Query: 425 LVGKSLVTISNNKIT--------MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           L  +SL+ +    I         MHD ++++G  IVR+E  ++P KRSR+W  +D   +L
Sbjct: 494 LTQRSLIKLQKPYIKGADIDMFWMHDHVRDLGRAIVREEKNQNPYKRSRIWSNKDAVDML 553

Query: 477 NENTS----------------LPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDL 517
                                + T    + L  L     SN +    F ++  N+  L L
Sbjct: 554 KHKKGTDWVEILEVDMKFEDFMLTDKEFEKLTRLRYLKVSNGRLAGDFKDVLPNLRWLRL 613

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCS---GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           K  + + +P+ +  L +LV L L +CS   G K  +  L   + L+ ++L  C  L+K+P
Sbjct: 614 K--SCDSIPTGL-YLKKLVTLQLVDCSVRDGWKGWNE-LKVARKLKAVSLKRCFHLKKVP 669

Query: 575 E----------------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           +                      +IGN +SL YL ++     KI   + +L  L  L   
Sbjct: 670 DFSDCEDLECLDFEECRNMRGEVDIGNFKSLRYLLISNTKITKIKGEIGRLLNLKYLLAS 729

Query: 613 NCKRLQSLPELPCGSSIHARHCTSLKTLS 641
           +     SL E+P G S      +SLK LS
Sbjct: 730 D----SSLKEVPAGIS----KLSSLKNLS 750


>gi|357500581|ref|XP_003620579.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495594|gb|AES76797.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1594

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 242/706 (34%), Positives = 370/706 (52%), Gaps = 94/706 (13%)

Query: 1   MASSS-SSINMIPHPK---HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRG 55
           MASSS SS  ++P P+   +DVF++FRG+D R+NF + L AAL R+ I  F DD  L +G
Sbjct: 1   MASSSNSSTALVPLPRRNCYDVFVTFRGEDTRNNFTNFLFAALERKGIYAFRDDTNLPKG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
             I P L   IEGS++ + + S  YASS WCL EL KI E     G+ V+P+FY VDPS+
Sbjct: 61  ESIGPELLRTIEGSQVFVAVLSRNYASSTWCLQELEKICECIKGSGKYVLPIFYGVDPSE 120

Query: 116 AGYCPSLGW-----------------------------MGIFDI-PTSESVLIEGNVNDI 145
                 + W                             +  +D+    +SV +E  V  I
Sbjct: 121 VKKQSGIYWDDFAKHEQRFKQDPHKVSRWREALNQVGSIAGWDLRDKQQSVEVEKIVQTI 180

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYS 204
              L       +KD LVG+ S  + ++ QLL  S +    +GIWG+GGIGKTT+A  +Y 
Sbjct: 181 LNILKCKSSFVSKD-LVGINSRTEALKHQLLLNSVDGVRVIGIWGMGGIGKTTLAMNLYG 239

Query: 205 NISSHFEGSYFMQNIR----------DESEKVG----GLANIHL-------NFERRRLSR 243
            I   F+ S F+ ++           D  +++     G+ +  +       +  R RLSR
Sbjct: 240 QICHRFDASCFIDDVSKIFRLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRHRLSR 299

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            K L++  ++  ++Q++ +    +    GSR++I +RD  +LK ++   V  V++V  L 
Sbjct: 300 EKTLLILDNVDQVEQLERIGVHREWLGAGSRIVIISRDEHILKEYK---VDVVYKVPLLD 356

Query: 304 YNDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           + +S  LF + AF  +      +  L+  ++ YANG+PLA+ VLGS+L G +  EW+SA+
Sbjct: 357 WTESHKLFCQKAFKLEKIIMKNYQNLAYEILNYANGLPLAITVLGSFLSGRNVTEWKSAL 416

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
            +L++ P+ D+  VL++SYDGL++ E+ IFLD ACFF   ++ ++ N L+ C F A IG 
Sbjct: 417 ARLRQSPNKDVMDVLQLSYDGLEETEKEIFLDIACFFNSRNEKIIKNILNCCGFHADIGF 476

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
             L+ KSL+TI  + + MH LL+E+G +IV++ S K+  K SR+W  + +Y V  EN   
Sbjct: 477 IVLIDKSLITIHGSIVEMHSLLEELGRKIVQENSSKEQRKWSRMWSKQQLYNVTMENMEK 536

Query: 483 PTGI-----NLDSLKELYLGGCSNLK----RFPEISC--NIEDLDLKETAI--------- 522
                     +D   E +L   SNL+    R  E     N E + LK  ++         
Sbjct: 537 HVEAVVFFGGIDKNVE-FLSTMSNLRLLIIRHDEYYMINNYELVMLKPYSLSNKLRYVQW 595

Query: 523 -----EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
                + LPSS  + + LV+L L   S +K +     +L +LRRL+LS   KLEK+ E+ 
Sbjct: 596 TGYPFKYLPSSF-HPAELVELILVR-SCIKQLWKNKKHLPNLRRLDLSDSKKLEKI-EDF 652

Query: 578 GNLESLEYLNLAE--KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           G   +LE+LNL    K  E  P S+  L KL  L L+ C  L S+P
Sbjct: 653 GQFPNLEWLNLERCIKLVELDP-SIGLLRKLVYLNLERCYNLVSIP 697



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 15/157 (9%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKE-TAIEELPSSIGNL----- 532
           S+P  I  L SLK L + GCS L + P IS   ++  D++E T+     SS+  L     
Sbjct: 695 SIPNNIFGLSSLKYLNMSGCSKLMK-PGISSEKKNKHDIRESTSHCRSTSSVFKLFIFPN 753

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
           +      +T+   L       C    LR +++S C  L  +P+ I  L  LE LNL   +
Sbjct: 754 NASFSAPVTHTYKLPCFRILYC----LRNIDISFC-HLSHVPDAIECLHRLERLNLGGNN 808

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
           F  +PS M++LS+L  L L++CK L+SLP+LP  S+I
Sbjct: 809 FVTLPS-MRKLSRLVYLNLEHCKLLESLPQLPFPSTI 844



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 5/102 (4%)

Query: 472 IYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET-AIEELPSSIG 530
           I Q+      LP    LD      L    +  +FP    N+E L+L+    + EL  SIG
Sbjct: 622 IKQLWKNKKHLPNLRRLDLSDSKKLEKIEDFGQFP----NLEWLNLERCIKLVELDPSIG 677

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            L +LV L+L  C  L S+ + +  L SL+ LN+SGC KL K
Sbjct: 678 LLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKLMK 719



 Score = 40.0 bits (92), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 10/114 (8%)

Query: 482 LPTGINLDSLKELYL-GGC-----SNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
           LP+  +   L EL L   C      N K  P    N+  LDL ++   E     G    L
Sbjct: 603 LPSSFHPAELVELILVRSCIKQLWKNKKHLP----NLRRLDLSDSKKLEKIEDFGQFPNL 658

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
             L+L  C  L  +   +  L+ L  LNL  C  L  +P  I  L SL+YLN++
Sbjct: 659 EWLNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMS 712


>gi|3860165|gb|AAC72978.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1221

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 234/739 (31%), Positives = 349/739 (47%), Gaps = 130/739 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KH VF SF G DVR   +SH+  +  R+ I+ FID+ + R   I   L  AI+GSKI+IV
Sbjct: 84  KHQVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIV 143

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           + S+ YASS WCL+EL +I++ +   GQIV+ +FY VDP+D               C   
Sbjct: 144 LLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGK 203

Query: 123 G------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + + LVG+ 
Sbjct: 204 TKEYVERWRKALEDVATIAGYHSHKWRNEADMIEKIATDVSNMLNSFKPSRDFNGLVGMR 263

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  +++ +S  F+ S  M NI+     
Sbjct: 264 AHMDMLEQLLRLVLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIMVNIKGCYPR 323

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 324 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 383

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++V   S +++  +F  NAFGQ  P  
Sbjct: 384 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVGYPSNDEAFQIFCMNAFGQKQPHE 440

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V+  A  +PL L+VLGS L+G S+ EWE  + +LK      I  +++ SYD 
Sbjct: 441 GFDEIAREVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGKIGSIIQFSYDA 500

Query: 384 LDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           L DE++ +FL  AC F        + L+  FLD      + G+  L  KSL++I +  I 
Sbjct: 501 LCDEDKYLFLYIACLFNKESTTKVEGLLGKFLD-----VRQGLHILAQKSLISIEDGNIY 555

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENT---SLPTGINLDSLKELY 495
           MH LL++ G E  R++ I     + +L   E DI +VLN++T       GINLD  K   
Sbjct: 556 MHTLLEQFGRETSRKQFIHHGYTKHQLLVGERDICEVLNDDTIDSRRFIGINLDLYK--- 612

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL-KSVSSRLC 554
                          N+E+L++ E A+E          R+ D      +G   ++  RL 
Sbjct: 613 ---------------NVEELNISEKALE----------RIHDFQFVRINGKNHALHERLQ 647

Query: 555 NL----KSLRRLNLSG----CL-----------------KLEKLPEEIGNLESLEYLNLA 589
            L      +R L+       CL                 KL+KL E    L +L++++L+
Sbjct: 648 GLIYQSPQIRSLHWKCYQNICLPSTFNSEFLVELDMSFSKLQKLWEGTKQLRNLKWMDLS 707

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
              + K   ++   + L +L+L+NC  L  LP     SSI       +  L   S+L+  
Sbjct: 708 YSSYLKELPNLSTATNLEELKLRNCSSLVELP-----SSIEKLTSLQILDLHRCSSLVEL 762

Query: 650 SS----KHWDIFNFSNCSN 664
            S       +I N  NCS+
Sbjct: 763 PSFGNATKLEILNLENCSS 781



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 82/161 (50%), Gaps = 29/161 (18%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LPT INL SL  L L  CS LK FPEIS +I+ L L  TAI+E+P SI + S L    +
Sbjct: 902  TLPTNINLKSLHTLNLIDCSRLKSFPEISTHIKYLRLIGTAIKEVPLSIMSWSPLAHFQI 961

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +    LK                        + P  +  +  L+      KD +++P  +
Sbjct: 962  SYFESLK------------------------EFPHALDIITELQL----SKDIQEVPPWV 993

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            K++S+L  LRL NC  L SLP+LP   + ++A +C SL+ L
Sbjct: 994  KRMSRLRALRLNNCNNLVSLPQLPDSLAYLYADNCKSLERL 1034



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 8/171 (4%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKETA-IEELPSSIGNLSRLVDL 538
           LP+  N   L+ L L  CS+L + P    + N+++L L   + + ELP+ I N + L  L
Sbjct: 762 LPSFGNATKLEILNLENCSSLVKLPPSINANNLQELSLTNCSRVVELPA-IENATNLWKL 820

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
           +L NCS L  +   +    +L+ L+  GC  L KLP  IG++ +LE   L+   +  ++P
Sbjct: 821 NLLNCSSLIELPLSIGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELP 880

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH---CTSLKTLSNSST 645
           SS+  L KL+ L ++ C +L++LP      S+H  +   C+ LK+    ST
Sbjct: 881 SSIGNLRKLTLLLMRGCSKLETLPTNINLKSLHTLNLIDCSRLKSFPEIST 931



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 37/166 (22%)

Query: 474 QVLN-ENTS----LPTGINLDSLKELYLGGCSNLKRFPEI-------------------- 508
           ++LN EN S    LP  IN ++L+EL L  CS +   P I                    
Sbjct: 772 EILNLENCSSLVKLPPSINANNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIEL 831

Query: 509 ------SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
                 + N++ LD +  +++ +LPSSIG+++ L    L+NCS L  + S + NL+ L  
Sbjct: 832 PLSIGTATNLKHLDFRGCSSLVKLPSSIGDMTNLEVFYLSNCSNLVELPSSIGNLRKLTL 891

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDFEKIPSSMKQL 603
           L + GC KLE LP  I NL+SL  LNL +    K F +I + +K L
Sbjct: 892 LLMRGCSKLETLPTNI-NLKSLHTLNLIDCSRLKSFPEISTHIKYL 936



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 124/276 (44%), Gaps = 55/276 (19%)

Query: 421 GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            + R+     V I+     +H+ LQ   G I      + P  RS  W     YQ    N 
Sbjct: 623 ALERIHDFQFVRINGKNHALHERLQ---GLIY-----QSPQIRSLHW---KCYQ----NI 667

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETA-IEELPSSIGNLSRLV 536
            LP+  N + L EL +   S L++  E +  + +L   DL  ++ ++ELP+ +   + L 
Sbjct: 668 CLPSTFNSEFLVELDMSF-SKLQKLWEGTKQLRNLKWMDLSYSSYLKELPN-LSTATNLE 725

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
           +L L NCS L  + S +  L SL+ L+L  C  L +LP   GN   LE LNL       K
Sbjct: 726 ELKLRNCSSLVELPSSIEKLTSLQILDLHRCSSLVELP-SFGNATKLEILNLENCSSLVK 784

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLP--------------------ELP--CGSSIHARH 633
           +P S+   + L +L L NC R+  LP                    ELP   G++ + +H
Sbjct: 785 LPPSINA-NNLQELSLTNCSRVVELPAIENATNLWKLNLLNCSSLIELPLSIGTATNLKH 843

Query: 634 -----CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
                C+SL  L +S   +T    + ++F  SNCSN
Sbjct: 844 LDFRGCSSLVKLPSSIGDMT----NLEVFYLSNCSN 875


>gi|359496030|ref|XP_002277205.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1195

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 170/405 (41%), Positives = 245/405 (60%), Gaps = 31/405 (7%)

Query: 114 SDAGYCP--SLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI 171
           S  GY P  S  W    D    E++LI+  V D+S KL  +  SD+K+ LVG+ S IKE+
Sbjct: 279 SGIGYSPTDSHAW----DQERLETMLIKDIVTDVSNKLFSINSSDDKN-LVGMSSRIKEV 333

Query: 172 ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLA- 230
           ES L   S +   VGIWG+ GIGKTT+A AIY+ +S  FE S F+ N+ ++ +K G +  
Sbjct: 334 ESLLFIESFDVRIVGIWGMDGIGKTTLARAIYNQVSHQFESSAFLLNVEEDFKKEGSIGL 393

Query: 231 ----------NIHLNFE-----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
                     + +LN       +RRL   KV I+  D+ D + +  L    D F  GSR+
Sbjct: 394 EQKLLSLLVDDRNLNIRGHTSIKRRLRSKKVFIMLDDVKDQEILGYLTENQDSFGHGSRI 453

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           IITT+D  LL +H    + + +E+++LS+ +++ +  R++     P    +ELS  V  Y
Sbjct: 454 IITTKDKNLLTSH----LVNYYEIRKLSHEEAMEVLRRHSSKHKLPEDDLMELSRRVTTY 509

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
           A G+PLAL++L S+L GM + EW+S ++KLK  P+ DI KVL++SYD LD++ +N+F+D 
Sbjct: 510 AQGLPLALKILSSFLFGMKKHEWKSYLDKLKGTPNPDINKVLRISYDELDNKVKNMFMDI 569

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQE 455
           ACFFKG D+  VM  L+ C F    GI  L+ KS +TISNNK+ MHDL+Q MG E+VRQ 
Sbjct: 570 ACFFKGKDKDYVMEILEGCGFFPACGIRTLLDKSFITISNNKLQMHDLIQHMGMEVVRQN 629

Query: 456 SIKDPGKRSRLWHPEDIYQVLNENTSLP--TGINLD--SLKELYL 496
           S  +PGK SRLW  ED+  V+ +NT      GI LD  +L+E++ 
Sbjct: 630 SPNEPGKWSRLWSHEDVSHVVKKNTGTEEVEGIFLDLSNLQEIHF 674



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 107/224 (47%), Gaps = 63/224 (28%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDL 538
             P  I L SL+   L GCS L++FPEI   +E L    L    IEELPSSI     LV L
Sbjct: 829  FPNSIELKSLQIFILSGCSKLEKFPEIRGYMEHLSELFLDGIGIEELPSSIEYAIGLVVL 888

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE----------------- 581
            DLTNC  L+S+ + +CNL+SL+ L LS C KLE LP+  G L+                 
Sbjct: 889  DLTNCKELRSLPNSICNLESLKTLLLSDCSKLESLPQNFGKLKQLRKLYNQTFAFPLLLW 948

Query: 582  ----SLEYL--------------------------------------NLAEKDFEKIPSS 599
                SL++L                                      NL   +F  +PSS
Sbjct: 949  KSSNSLDFLLPPLSTLRSLQDLNLSDCNIVDGPQLSVLSLMLSLKKLNLTGNNFVSLPSS 1008

Query: 600  MKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
            + QL +L+ L+L NC+RLQ++PEL      I+A +C  L+T+SN
Sbjct: 1009 ISQLPQLTVLKLLNCRRLQAIPELLSSIEVINAHNCIPLETISN 1052



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 81/157 (51%), Gaps = 13/157 (8%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIE--ELPSSIGNLSRLVDLDLTNC 543
           L+ LK + L     L   P++S   N+E L L E  I    +  S+G L++L+ L L +C
Sbjct: 765 LEKLKFMELSHSQCLVEIPDLSRASNLERLVL-EGCIHLCAIHPSLGVLNKLIFLSLRDC 823

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L+   + +  LKSL+   LSGC KLEK PE  G +E L  L L     E++PSS++  
Sbjct: 824 INLRHFPNSI-ELKSLQIFILSGCSKLEKFPEIRGYMEHLSELFLDGIGIEELPSSIEYA 882

Query: 604 SKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
             L  L L NCK L+SLP   C          SLKTL
Sbjct: 883 IGLVVLDLTNCKELRSLPNSICN-------LESLKTL 912


>gi|357499601|ref|XP_003620089.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495104|gb|AES76307.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1079

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 239/737 (32%), Positives = 372/737 (50%), Gaps = 116/737 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R+ F  +LN ALC + I TF+DD+ L  G EI+ SL  AIE S+I I 
Sbjct: 20  YDVFLSFRGSDTRYRFTGNLNRALCDKGIRTFMDDRELQGGEEITSSLFKAIEESRIFIP 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           + S  YASS +CL+ELV I+    + G++V+P+FY V+PS        Y  +L       
Sbjct: 80  VLSINYASSSFCLDELVHIINCFKESGRLVLPIFYDVEPSHVRHHTGSYGKALDDHIKKF 139

Query: 124 ------------WMGIFDIPTS-------------ESVLIEGNVNDISKKLSDLFPSDNK 158
                       W        +             E   IE  V  +S K++ + P    
Sbjct: 140 QNNKDSMERLQKWKSALTQTANFSGHHFNPAGNGYEHEFIEKIVKYVSNKINHV-PLYVA 198

Query: 159 DQLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
           D  VG+ES + ++ S +  GS  E   +GI+G GG+GKTT+A A+Y++++  F+   F+ 
Sbjct: 199 DFPVGIESRVLKVNSLMDFGSNGEVQMLGIYGPGGMGKTTLARAVYNSLADQFDDLCFLH 258

Query: 218 NIRDESEKVGGLANIHLNFERRRLSRM-KVLIVFYDLTD----------LKQIDLLIGRL 266
           ++R  S K G L ++    + + LS++ K+ I   D+ +           K++++L G  
Sbjct: 259 DVRGNSAKYG-LEHL----QGKLLSKLVKLDIKLGDVYEGIPIIEKRLHQKKLEVLAGGF 313

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
             F PGS VIITTRD QLL +H   R    +++ +L+  ++L L +  A   N     F 
Sbjct: 314 RWFGPGSIVIITTRDKQLLAHHGIERA---YKLHKLNEKEALELLTWKALKNNKVDTNFD 370

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
            + +  + YA+G+PLAL+V+GS L G +  EW+SA+N+ +R+P   IQ++LKVS+D L +
Sbjct: 371 SVLHHAVTYASGLPLALEVVGSNLFGKNIGEWKSALNQYERIPDKKIQEILKVSFDALGE 430

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGKSLVTISN------NKIT 439
            EQN+FLD AC FKG +   + + L A   +  K  I  L+ KSL+ I        + +T
Sbjct: 431 AEQNVFLDIACCFKGYELKELEDVLHAHYGNCMKYQIRVLLDKSLLNIKQCQWSLTDVVT 490

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP---------------- 483
           +H L+++MG EIVR+ES K+PG+RSRLW  +DI  VL  N                    
Sbjct: 491 LHALIEKMGKEIVRKESPKEPGRRSRLWFHKDIIDVLEANKGSSEIEIIYLECSSSEKVV 550

Query: 484 ---TGINLDSLKELYL-----GGCSNLKRFPEISCNIEDLDLKETAIEELPSSI------ 529
               G  L+ +++L       G  SN  ++   S  +  L+ ++     +PS        
Sbjct: 551 VDWKGDELEKMQKLKTLIVKNGTFSNGPKYLPNSLRV--LEWQKYPSRVIPSDFSQRNFL 608

Query: 530 -GNLSRLV-------------DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
             N S++              +L+L NC  L  +   + NL +L   +   C  L ++ +
Sbjct: 609 YANYSKVTLHHLSCVRFVNMRELNLDNCQFLTRIHD-VSNLSNLEIFSFQQCKNLIEIHK 667

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC- 634
            +G L  LE LN AE   + +     +L+ L +LRL +CK L + PE+    +   R C 
Sbjct: 668 SVGFLNKLEVLN-AEGCSKLMSFPPLKLTSLDELRLSDCKNLNNFPEILGEMNNIKRICW 726

Query: 635 --TSLKTLSNSSTLLTR 649
             TS+K +  S   LT+
Sbjct: 727 ENTSIKEVPVSFQNLTK 743



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 36/188 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SL EL L  C NL  FPEI     NI+ +  + T+I+E+P S  NL++L+ L +  
Sbjct: 692 LKLTSLDELRLSDCKNLNNFPEILGEMNNIKRICWENTSIKEVPVSFQNLTKLLYLTIKG 751

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES-------------------- 582
             G+  + S +  + +L  +   GC+   KL +++ ++ +                    
Sbjct: 752 -KGMVRLPSSIFRMPNLSDITAEGCI-FPKLDDKLSSMLTTSPNRLWCITLKSCNLSDEF 809

Query: 583 ----------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHA 631
                     +  L+L+  +F  +P  +K    LSDL L +CK L+ +  +P   +++ A
Sbjct: 810 LPIFVMWSAYVRILDLSGNNFTILPECIKDCHLLSDLILDDCKCLREIRGIPLNLTNLSA 869

Query: 632 RHCTSLKT 639
            +C SL +
Sbjct: 870 ANCKSLTS 877



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 10/181 (5%)

Query: 490 SLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
           +++EL L  C  L R  ++S   N+E    ++   + E+  S+G L++L  L+   CS L
Sbjct: 627 NMRELNLDNCQFLTRIHDVSNLSNLEIFSFQQCKNLIEIHKSVGFLNKLEVLNAEGCSKL 686

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
            S       L SL  L LS C  L   PE +G + +++ +       +++P S + L+KL
Sbjct: 687 MSFPP--LKLTSLDELRLSDCKNLNNFPEILGEMNNIKRICWENTSIKEVPVSFQNLTKL 744

Query: 607 SDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
             L ++  K +  LP     +P  S I A  C   K     S++LT S          +C
Sbjct: 745 LYLTIKG-KGMVRLPSSIFRMPNLSDITAEGCIFPKLDDKLSSMLTTSPNRLWCITLKSC 803

Query: 663 S 663
           +
Sbjct: 804 N 804


>gi|449482307|ref|XP_004156243.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1857

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 205/573 (35%), Positives = 300/573 (52%), Gaps = 65/573 (11%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETF---IDDKLNRGNEISPS 61
           S S+ + P   +DVFLS R KD   +F + L+ AL  + I  F   IDD+      +   
Sbjct: 22  SISLPLPPLRNYDVFLSHRVKDTGSSFAADLHEALTNQGIVVFRDGIDDEDAEQPYVEEK 81

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----- 116
           +  A+E S+ SIV+FSE Y S   C+ E+ KI+  K    Q+V+P+FY +DP +      
Sbjct: 82  MK-AVEESRSSIVVFSENYGSFV-CMKEVGKIVTCKELMDQLVLPIFYKIDPGNVRKQEG 139

Query: 117 ---------------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKL-SDLFP 154
                                 +  S+  +G     + E  +I   V  I  KL  DLF 
Sbjct: 140 NFKKYFNDHEANPKIDIEEVENWRYSMNQVGHLSGWSEEGSIINEVVKHIFNKLRPDLFR 199

Query: 155 SDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
            D  D+LVG+   + +I   L  G  +   VGIWG+GGIGKTTIA  IY ++S  F+G Y
Sbjct: 200 YD--DKLVGISPRLHQINMLLGIGLDDVRFVGIWGMGGIGKTTIARIIYKSVSHLFDGCY 257

Query: 215 FMQNIRDESEK-----------VGGLANIHLNFE--------RRRLSRMKVLIVFYDLTD 255
           F+ N+++  +K            G L   +++          +RR+S +K LI+  D+  
Sbjct: 258 FLDNVKEALKKEDIASLQQKLLTGTLMKRNIDIPNADGATLIKRRISNIKALIILDDVNH 317

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L Q+  L G LD F  GSRVI+TTRD  LL +H   R    + V+ L   + L LFS+ A
Sbjct: 318 LSQLQKLAGGLDWFGSGSRVIVTTRDEHLLISHGIERR---YNVEVLKIEEGLQLFSQKA 374

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           FG+ H    + ++ + V+ YA G+PLA++VLGS L+    E+W +AV KL  +   +I +
Sbjct: 375 FGEEHTKEEYFDVCSQVVDYAGGLPLAIEVLGSSLRNKPMEDWINAVEKLWEVRDKEIIE 434

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
            LK+SY  L+  EQ IFLD ACFFK   +   +  L++  F A +G+  L  K L+T  +
Sbjct: 435 KLKISYYMLEKSEQKIFLDIACFFKRKSKKQAIEILESFGFPAVLGLEILEEKCLITTPH 494

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGI--NLDSL 491
           +K+ MHDL+QEMG EIVRQ  + +P KR+RLW  ED+   L  ++ T    GI  +LD  
Sbjct: 495 DKLHMHDLIQEMGQEIVRQNFLNEPEKRTRLWLREDVNLALSRDQGTEAIEGIMMDLDEE 554

Query: 492 KELYLGGCSNLKRFPEISCNIEDLDLKETAIEE 524
            E +L    N K F E++ N+  L L    + E
Sbjct: 555 GESHL----NAKAFSEMT-NLRVLKLNNVHLSE 582



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 227/518 (43%), Gaps = 78/518 (15%)

Query: 178  GSTEFNTVGIWGIGGIGKTTIASAIYSNISS------------HFEGSYFMQNIRDESEK 225
            GS +   +GI G+ GIGKTT+A   Y  I              HF G   +   +   ++
Sbjct: 787  GSNDVRFIGIVGMSGIGKTTLAEMTYLRIFKPFVSALRKPYFLHFVGRSIVSLQQQLLDQ 846

Query: 226  VGGLANIHLN---------FERRRLSRMK-VLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
            +  L  I +             + LS +K VLIVF  +T+  Q+++L G  D F  GSR+
Sbjct: 847  LAFLKPIDIQVLDENHGVELIMQHLSSLKNVLIVFDGITERSQLEMLAGSPDWFGAGSRI 906

Query: 276  IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
            IITT +  +  +         + V+ LS+  + +LF + AFG +       +L N +I+ 
Sbjct: 907  IITTTNKNIFHHPNFKDKVQEYNVELLSHEAAFSLFCKLAFGDHPHTQNMDDLCNEMIEK 966

Query: 336  ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI-QKVLKVSYDGLDDEEQNIFLD 394
               +PLAL+ +   L G + + WE  +    ++ + +I   VLK SY+GL+ E Q IFLD
Sbjct: 967  VGRLPLALEKIAFSLYGQNIDVWEHTLKNFHQVVYDNIFSDVLKSSYEGLEAESQQIFLD 1026

Query: 395  TACFFKGNDQYLVMNFLDACRF-SAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVR 453
             ACF  G     V+  L    + S +  +  LV + L+ I +  I MH L+  MG EIV 
Sbjct: 1027 LACFLNGEKVDRVIQILQGFGYTSPQTNLQLLVDRCLIDILDGHIQMHILILCMGQEIVH 1086

Query: 454  QESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGINLD---------------SLKELYL 496
            +E      +++R+W  +D  ++ +EN  L    GI +D                + EL +
Sbjct: 1087 REL--GNCQQTRIWLRDDARRLFHENNELKYIRGIVMDLEEEEELVLKAKAFADMSELRI 1144

Query: 497  GGCSNLKRFPEISC-------------------------NIEDLDLKETAIEELPSSIGN 531
               +N++   +I C                         ++ +L L  + +E L +   N
Sbjct: 1145 LRINNVQLSEDIECLSNKLTLLNWPGYPSKYLPSTFQPPSLLELHLPGSNVERLWNGTQN 1204

Query: 532  LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL--- 588
               L ++D ++   L   +        LRRL L  C +L K+   I +L  L  L++   
Sbjct: 1205 FKNLKEIDASDSKFLVE-TPNFSEAPKLRRLILRNCGRLNKVHSSINSLHRLILLDMEGC 1263

Query: 589  -AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
             + + F   P + K L  L    L NC  L+  PE  C
Sbjct: 1264 VSFRSF-SFPVTCKSLKTLV---LSNCG-LEFFPEFGC 1296



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 42/270 (15%)

Query: 142  VNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIAS 200
            + D+ K+  +     +K  LVG+E+ +K++ + L L  S +   VGI+G  GIGKTTIA 
Sbjct: 1600 IKDMGKQTDNKLVLSHKTSLVGMENQVKKVCNLLDLERSKDILFVGIFGSSGIGKTTIAE 1659

Query: 201  AIYSNISSHFEGSYFMQNIRDESEKVGGLANI--HL--------------NFERRRLSRM 244
             +Y+ I   F+   F+     ++  V     I  HL                 +  +S  
Sbjct: 1660 VVYNTIIDEFQSGCFLYLSSKQNSLVPLQHQILSHLLSKETKIWDEDHGAQLIKHHMSNR 1719

Query: 245  KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITT--RDVQLLKNHRGSRVGHVFEVKEL 302
            KV+IV   + +  QI+ L+G  + F PGSRVIIT   RDV    N+R       ++V+ L
Sbjct: 1720 KVVIVLDGVDERNQIEKLVGSPNWFAPGSRVIITATNRDVLHQLNYRDQV--QEYKVELL 1777

Query: 303  SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
            S   + +LF +NAFG         +L + +++    +PLAL+ +GSYL     + W    
Sbjct: 1778 SRESAYSLFCKNAFGDGPSDKN--DLCSEIVEKVGRLPLALRTIGSYLHNKDLDVWNET- 1834

Query: 363  NKLKRMPHMDIQKVLKVSYDGLDDEEQNIF 392
              LKR                LD+EEQN F
Sbjct: 1835 --LKR----------------LDEEEQNYF 1846



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 85/156 (54%), Gaps = 18/156 (11%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKETAIEELPSSIGNLSRL 535
            +SLPT I  L SLK L L GC NL + P       ++E+LD+  T+I  +P        L
Sbjct: 1336 SSLPTEICRLSSLKTLILNGCKNLDKIPPCLRYVKHLEELDIGGTSISTIPF-------L 1388

Query: 536  VDLDLTNCSGLKS-VSSRLCNL-----KSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNL 588
             +L + NC  LKS +   L  L     +SL  LNLS C L  E +P ++    SLE L+L
Sbjct: 1389 ENLRILNCERLKSNIWHSLAGLAAQYLRSLNDLNLSDCNLVDEDIPNDLELFSSLEILDL 1448

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            +   FE++  S+KQL  L  L L +C +L+ +P+LP
Sbjct: 1449 SSNHFERLSESIKQLINLKVLYLNDCNKLKQVPKLP 1484



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 11/137 (8%)

Query: 486  INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
            +   SLK L L  C  L+ FPE  C    + +L +  T+I +L  SI NL  LV L+L N
Sbjct: 1273 VTCKSLKTLVLSNCG-LEFFPEFGCVMGYLTELHIDGTSINKLSPSITNLLGLVLLNLRN 1331

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
            C  L S+ + +C L SL+ L L+GC  L+K+P  +  ++ LE L++       IP     
Sbjct: 1332 CIRLSSLPTEICRLSSLKTLILNGCKNLDKIPPCLRYVKHLEELDIGGTSISTIPF---- 1387

Query: 603  LSKLSDLRLQNCKRLQS 619
               L +LR+ NC+RL+S
Sbjct: 1388 ---LENLRILNCERLKS 1401


>gi|3860167|gb|AAC72979.1| disease resistance protein RPP1-WsC [Arabidopsis thaliana]
          Length = 1217

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 235/729 (32%), Positives = 354/729 (48%), Gaps = 112/729 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 80  KHDVFPSFHGADVRRTFLSHIMESFRRKGIDTFIDNNIERSKSIGPELKKAIKGSKIAIV 139

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           + S  YASS WCL+EL +I++ +   GQIV+ +FY V+P+D               C   
Sbjct: 140 LLSRKYASSSWCLDELAEIMKCREVLGQIVMTIFYEVEPTDIKKQTGEFGKAFTKTCRGK 199

Query: 123 G------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 200 TKEHIERWRKALEDVATIAGYHSHKWRNEADMIEKIATDVSNMLNSCTPSRDFDGLVGMR 259

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  + + +S  F+ S  M NI+     
Sbjct: 260 AHMNMMEHLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRFQLSAIMVNIKGCYPR 319

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 320 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 379

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++V   S +++  +F  NAFGQ  P  
Sbjct: 380 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVGYPSNDEAFQIFCMNAFGQKQPHE 436

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V+  A  +PL L VLGS L+G S+ EWE  + +LK     +I  +++ SYD 
Sbjct: 437 GFDEIAREVMALAGELPLGLTVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDA 496

Query: 384 LDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTIS----- 434
           L DE++ +FL  AC F        + L+  FLD      K G+  L  KSL+++S     
Sbjct: 497 LCDEDKYLFLYIACLFNDESTTKVKELLGKFLD-----VKQGLHVLAQKSLISLSYLTFY 551

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDP-GKRSRLWHPEDIYQVLNENTSLP---TGINLD- 489
             +I MH LL++ G E  R++ +     KR  L     I +VL+++T+      GINL+ 
Sbjct: 552 GERIHMHTLLEQFGRETSRKQFVHHGFTKRQLLVGARGICEVLDDDTTDSRRFIGINLEL 611

Query: 490 -------SLKELYLGGCSNL------------KRFPE-ISCNIEDLDLKETAIEE----- 524
                  ++ E  L    +             +  PE +   ++DL      I       
Sbjct: 612 SNTEEELNISEKVLERVHDFHFVRIDASFQPERLQPERLQLALQDLIYHSPKIRSLKWHR 671

Query: 525 -----LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--EEI 577
                LPS+  N   L++LD+   S L+ +      L++L+ ++LS  + L++LP     
Sbjct: 672 YQNICLPSTF-NPEFLIELDM-RYSKLQKLWEGTKQLRNLKWMSLSYSIDLKELPNLSTA 729

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHC 634
            NLE L+  N +     ++PSS+++L+ L  L LQ+C  L  LP     + +      +C
Sbjct: 730 TNLEELKLSNCS--SLVELPSSIEKLTSLQILDLQSCSSLVELPSFGNATKLEILDLDYC 787

Query: 635 TSLKTLSNS 643
           +SL  L  S
Sbjct: 788 SSLVKLPPS 796



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 81/161 (50%), Gaps = 29/161 (18%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP  INL +L  LYL  CS LKRFPEIS NI+ L L  TAI+E+P SI + SRL +  +
Sbjct: 887  TLPININLKALSTLYLTDCSRLKRFPEISTNIKYLWLTGTAIKEVPLSIMSWSRLAEFRI 946

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +    LK                        + P     +  L+      KD +++P  +
Sbjct: 947  SYFESLK------------------------EFPHAFDIITKLQL----SKDIQEVPPWV 978

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            K++S+L  L L NC  L SLP+L      IHA +C SL+ L
Sbjct: 979  KRMSRLRVLSLNNCNNLVSLPQLSDSLDYIHADNCKSLEKL 1019



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 26/165 (15%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP  IN ++L+EL L  CS L   P     + N++ L++K  +++ +LPSSIG+++ L  
Sbjct: 793 LPPSINANNLQELSLRNCSRLIELPLSIGTATNLKKLNMKGCSSLVKLPSSIGDITDLEV 852

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL-------------- 583
           LDL+NCS L  + S + NL+ L  L + GC KLE LP  I NL++L              
Sbjct: 853 LDLSNCSNLVELPSSIGNLQKLIVLTMHGCSKLETLPINI-NLKALSTLYLTDCSRLKRF 911

Query: 584 -------EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                  +YL L     +++P S+   S+L++ R+   + L+  P
Sbjct: 912 PEISTNIKYLWLTGTAIKEVPLSIMSWSRLAEFRISYFESLKEFP 956



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 26/215 (12%)

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE 519
           P  RS  WH    YQ    N  LP+  N + L EL +   S L++  E +  + +L    
Sbjct: 662 PKIRSLKWHR---YQ----NICLPSTFNPEFLIELDMRY-SKLQKLWEGTKQLRNLKWMS 713

Query: 520 TA----IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            +    ++ELP+ +   + L +L L+NCS L  + S +  L SL+ L+L  C  L +LP 
Sbjct: 714 LSYSIDLKELPN-LSTATNLEELKLSNCSSLVELPSSIEKLTSLQILDLQSCSSLVELP- 771

Query: 576 EIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-----I 629
             GN   LE L+L       K+P S+   + L +L L+NC RL  LP L  G++     +
Sbjct: 772 SFGNATKLEILDLDYCSSLVKLPPSINA-NNLQELSLRNCSRLIELP-LSIGTATNLKKL 829

Query: 630 HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           + + C+SL  L +S   +T      ++ + SNCSN
Sbjct: 830 NMKGCSSLVKLPSSIGDIT----DLEVLDLSNCSN 860


>gi|23477201|emb|CAD36199.1| NLS-TIR-NBS disease resistance protein [Populus tremula]
          Length = 516

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 193/524 (36%), Positives = 287/524 (54%), Gaps = 65/524 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF SFRGKD R  F  HL  AL +  I TF DD +L RG EIS  L  AI  SKI IV
Sbjct: 1   YDVFFSFRGKDTRKTFTDHLYTALVQAGIHTFRDDDELPRGEEISDHLLKAIRESKICIV 60

Query: 75  IFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPS-----DAGYCPSL------ 122
           +FS+GYASSRWCL+ELV+IL+ K  K GQI +P+FY +DPS        +  +       
Sbjct: 61  VFSKGYASSRWCLDELVEILKCKYRKTGQIALPIFYDIDPSYVRKQTGSFAEAFVKHEER 120

Query: 123 ---------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                          G +  +++   E+  I+  + D+  KL   +    K  LVG++ +
Sbjct: 121 SKEKVKEWREALEEAGNLSGWNLKDHEAKFIQEIIKDVLTKLDPKYLHVPK-HLVGIDPL 179

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI----SSHFEGSYFMQNIRDES 223
              I   L + + +   VG+ G+ GIGKTTIA  +++ +       FEG+ F+ N++++S
Sbjct: 180 AHNIFHFLSTAADDVCIVGLHGMPGIGKTTIAKVVFNQLCYGFGYGFEGNLFLLNVKEKS 239

Query: 224 E------------------KVGGLANIHLN--FERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           E                      + N+       + RL R +VL+V  D+  L Q++ L+
Sbjct: 240 EPNDLVLLQQQLLHDILRQNTEKITNVDRGKVLIKERLCRKRVLVVVDDVDHLDQLNALM 299

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
           G    F PGSRVIITTRD +LL           ++V+E+   +SL LF ++AF    PA 
Sbjct: 300 GERSWFGPGSRVIITTRDERLLLE-----ADQRYQVQEMDPYESLQLFCQHAFRDAKPAK 354

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
            ++ELSN V++Y  G+PLAL+VLGS L G ++  WES +++L+R+P   IQ+ L++S+D 
Sbjct: 355 DYVELSNDVVEYCGGLPLALEVLGSCLIGKNQARWESVIDRLRRIPEHAIQERLRISFDS 414

Query: 384 LDDEE-QNIFLDTACFFKGNDQYLVMNFLD---ACRFSAKIGISRLVGKSLVTISNN-KI 438
           L     +N FLD +CFF G  +  V   L+    C      G   L+ +S++ + ++  I
Sbjct: 415 LKAPNLKNTFLDISCFFIGGQKEYVAEVLEGRYGCNPEDDFGT--LIERSVIKVDDSGTI 472

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
           +MHDLL+EMG  IV+ ES ++P +RSR+W  ED ++VL     L
Sbjct: 473 SMHDLLREMGRGIVKDESPENPAQRSRIWCQEDAWKVLKMQMKL 516


>gi|358347701|ref|XP_003637894.1| Elongation factor Ts [Medicago truncatula]
 gi|355503829|gb|AES85032.1| Elongation factor Ts [Medicago truncatula]
          Length = 1319

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 239/705 (33%), Positives = 369/705 (52%), Gaps = 92/705 (13%)

Query: 1   MASSS-SSINMIPHPK---HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRG 55
           MASSS SS  ++P P+   +DVF++FRG+D R+NF + L AAL R+ I  F DD  L +G
Sbjct: 1   MASSSNSSTALVPLPRRNCYDVFVTFRGEDTRNNFTNFLFAALERKGIYAFRDDTNLPKG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
             I P L   IEGS++ + + S  YASS WCL EL KI E     G+ V+P+FY VDPS+
Sbjct: 61  ESIGPELLRTIEGSQVFVAVLSRNYASSTWCLQELEKICECIKGSGKYVLPIFYGVDPSE 120

Query: 116 AGYCPSLGW-----------------------------MGIFDI-PTSESVLIEGNVNDI 145
                 + W                             +  +D+    +SV +E  V  I
Sbjct: 121 VKKQSGIYWDDFAKHEQRFKQDPHKVSRWREALNQVGSIAGWDLRDKQQSVEVEKIVQTI 180

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYS 204
              L       +KD LVG+ S  + ++ QLL  S +    +GIWG+GGIGKTT+A  +Y 
Sbjct: 181 LNILKCKSSFVSKD-LVGINSRTEALKHQLLLNSVDGVRVIGIWGMGGIGKTTLAMNLYG 239

Query: 205 NISSHFEGSYFMQNIR----------DESEKVG----GLANIHL-------NFERRRLSR 243
            I   F+ S F+ ++           D  +++     G+ +  +       +  R RLSR
Sbjct: 240 QICHRFDASCFIDDVSKIFRLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRHRLSR 299

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            K L++  ++  ++Q++ +    +    GSR++I +RD  +LK ++   V  V++V  L 
Sbjct: 300 EKTLLILDNVDQVEQLERIGVHREWLGAGSRIVIISRDEHILKEYK---VDVVYKVPLLD 356

Query: 304 YNDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           + +S  LF + AF  +      +  L+  ++ YANG+PLA+ VLGS+L G +  EW+SA+
Sbjct: 357 WTESHKLFCQKAFKLEKIIMKNYQNLAYEILNYANGLPLAITVLGSFLSGRNVTEWKSAL 416

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
            +L++ P+ D+  VL++SYDGL++ E+ IFLD ACFF   ++ ++ N L+ C F A IG 
Sbjct: 417 ARLRQSPNKDVMDVLQLSYDGLEETEKEIFLDIACFFNSRNEKIIKNILNCCGFHADIGF 476

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
             L+ KSL+TI  + + MH LL+E+G +IV++ S K+  K SR+W  + +Y V  EN   
Sbjct: 477 IVLIDKSLITIHGSIVEMHSLLEELGRKIVQENSSKEQRKWSRMWSKQQLYNVTMENMEK 536

Query: 483 PTGI-----NLDSLKELYLGGCSNLK----RFPEISC--NIEDLDLKETAI--------- 522
                     +D   E +L   SNL+    R  E     N E + LK  ++         
Sbjct: 537 HVEAVVFFGGIDKNVE-FLSTMSNLRLLIIRHDEYYMINNYELVMLKPYSLSNKLRYVQW 595

Query: 523 -----EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
                + LPSS  + + LV+L L   S +K +     +L +LRRL+LS   KLEK+ E+ 
Sbjct: 596 TGYPFKYLPSSF-HPAELVELILVR-SCIKQLWKNKKHLPNLRRLDLSDSKKLEKI-EDF 652

Query: 578 GNLESLEYLNLAEK-DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           G   +LE+LNL       ++  S+  L KL  L L+ C  L S+P
Sbjct: 653 GQFPNLEWLNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIP 697



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 15/158 (9%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKE-TAIEELPSSIGNL---- 532
            S+P  I  L SLK L + GCS L + P IS   ++  D++E T+     SS+  L    
Sbjct: 694 VSIPNNIFGLSSLKYLNMSGCSKLMK-PGISSEKKNKHDIRESTSHCRSTSSVFKLFIFP 752

Query: 533 -SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
            +      +T+   L       C    LR +++S C  L  +P+ I  L  LE LNL   
Sbjct: 753 NNASFSAPVTHTYKLPCFRILYC----LRNIDISFC-HLSHVPDAIECLHRLERLNLGGN 807

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
           +F  +PS M++LS+L  L L++CK L+SLP+LP  S+I
Sbjct: 808 NFVTLPS-MRKLSRLVYLNLEHCKLLESLPQLPFPSTI 844



 Score = 46.2 bits (108), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 5/102 (4%)

Query: 472 IYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET-AIEELPSSIG 530
           I Q+      LP    LD      L    +  +FP    N+E L+L+    + EL  SIG
Sbjct: 622 IKQLWKNKKHLPNLRRLDLSDSKKLEKIEDFGQFP----NLEWLNLERCIKLVELDPSIG 677

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            L +LV L+L  C  L S+ + +  L SL+ LN+SGC KL K
Sbjct: 678 LLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMSGCSKLMK 719



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 10/114 (8%)

Query: 482 LPTGINLDSLKELYL-GGC-----SNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
           LP+  +   L EL L   C      N K  P    N+  LDL ++   E     G    L
Sbjct: 603 LPSSFHPAELVELILVRSCIKQLWKNKKHLP----NLRRLDLSDSKKLEKIEDFGQFPNL 658

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
             L+L  C  L  +   +  L+ L  LNL  C  L  +P  I  L SL+YLN++
Sbjct: 659 EWLNLERCIKLVELDPSIGLLRKLVYLNLERCYNLVSIPNNIFGLSSLKYLNMS 712


>gi|357468447|ref|XP_003604508.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505563|gb|AES86705.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 806

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 216/595 (36%), Positives = 324/595 (54%), Gaps = 67/595 (11%)

Query: 133 SESVLIEGNVNDISKKLSDLFPSD-NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIG 191
           +++VL+E     +  +LS+L  S  N  +LVG++  I ++ S L   S +   +GIWG+G
Sbjct: 41  NDAVLVEEITKVVLMRLSELKNSPVNSKELVGIDKPIADLNSLLKKESEQVRVIGIWGMG 100

Query: 192 GIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFE-------------- 237
           GIGKTTIA  I+S   S ++G  F++ + +  +  GG+  +  +                
Sbjct: 101 GIGKTTIAEEIFSQNRSDYDGCCFLEKVSERLKTPGGVGCLKESLLSELLKESVKELSGD 160

Query: 238 -RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV 296
            +RR+SRMKVLIV  D+ +  Q+++L G LD F   SR+I+T+RD Q+L+N+       +
Sbjct: 161 IKRRISRMKVLIVLDDVKETDQLEMLFGTLDWFQSDSRIILTSRDKQVLRNNEVED-DDI 219

Query: 297 FEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE 356
           +EV  L  +++L LF+ NAF Q+H    + ELS  V+ YA G+PL L+VL   L+G  +E
Sbjct: 220 YEVGVLDSSEALVLFNSNAFKQSHLEMEYYELSKSVVNYAKGIPLVLKVLAHMLRGKKKE 279

Query: 357 EWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYL--VMNFLDAC 414
            WES ++KL+R+P   +   +++SYD LD  EQ  FLD ACFF G D  +  + + L  C
Sbjct: 280 VWESQLDKLRRLPVQKVYDAMRLSYDDLDRLEQKYFLDIACFFNGLDLKVDYMKHLLKDC 339

Query: 415 RFSAKI--GISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
                +  G+  L  K+L+TIS +N I+MHD+LQEMG EIVRQES  D GKRSRLW+P++
Sbjct: 340 DSDNYVAGGLETLKDKALITISEDNVISMHDILQEMGWEIVRQES-SDLGKRSRLWNPDE 398

Query: 472 IYQVLNEN--------TSLPTGINLD--------SLKELYLGGCSNLKRFPEI--SCNIE 513
           IY VL  +         SLPT   L          +K L+   C  LK FPE   + N+ 
Sbjct: 399 IYDVLKNDKGTNAIRSISLPTMRELKLRLQSFPLGIKYLHWTYCP-LKSFPEKFSAKNLV 457

Query: 514 DLDLKETAIEELPSSIGNLSRLVD-----------------------LDLTNCSGLKSVS 550
            LDL ++ +E+L   + +L  L +                       L++++C  LKSV 
Sbjct: 458 ILDLSDSLVEKLWCGVQDLINLKEVRLSYSMLLKELPDFSKAINLKVLNISSCYQLKSVH 517

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
             + +L  L +L LS C  +  LP   G    LE L L   D E IPSS+K L++L  L 
Sbjct: 518 PSILSLNRLEQLGLSWC-PINALPSSFGCQRKLEILVLRYSDIEIIPSSIKNLTRLRKLD 576

Query: 611 LQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           ++ C +L +LPELP    ++  +   SLKT+   ST+  +  ++     F NC N
Sbjct: 577 IRGCLKLVALPELPSSVETLLVKDSFSLKTVLFPSTVAEQFKENKKSVEFWNCEN 631


>gi|357486563|ref|XP_003613569.1| Disease resistance-like protein [Medicago truncatula]
 gi|355514904|gb|AES96527.1| Disease resistance-like protein [Medicago truncatula]
          Length = 1082

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 230/715 (32%), Positives = 360/715 (50%), Gaps = 101/715 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFL+F G D R +F  +L  ALC + I  FIDDK L RG++I+PSL  AIE S+I+I 
Sbjct: 22  YDVFLNFCGDDTRFHFTGNLYKALCDKGIRVFIDDKELQRGDKITPSLIKAIEDSRIAIP 81

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG----------------- 117
           +FS+ YA S +CL+ELV I++  +  G++V+PVFY VDPS                    
Sbjct: 82  VFSKNYAFSSFCLDELVNIIDGFSAKGRLVLPVFYDVDPSHVRHQIGSYGEAIAMHEARL 141

Query: 118 ------YCPSLGWMGIFDIPTSESVLIEG-NVND--------ISKKLSDLFPSDNKDQL- 161
                 Y  ++  +  +    +++  + G + N         I + + ++    N+D L 
Sbjct: 142 KRDKEMYIDNMDRLQKWKTALNQAANLSGYHFNHGNEYEHEFIGRIMKEVAKKINRDLLH 201

Query: 162 -----VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIG-----KTTIASAIYSNISSHFE 211
                VG+ES + ++ S L   S E N  G++ +G  G     KTT+A AIY+ I+  FE
Sbjct: 202 VADYAVGLESRLLQVNSLL---SVESNN-GVYMVGIHGIGGIGKTTLARAIYNLIADQFE 257

Query: 212 GSYFMQNIRDESEKVG-------------------GLANIHLNFERRRLSRMKVLIVFYD 252
              F+ ++R+ S K G                   G  +  +   ++RL + KVL++  D
Sbjct: 258 CLCFLHDVRENSSKHGLEHLQERLLSKTIGLDIKLGHVSEGIPIIKQRLQQKKVLLILDD 317

Query: 253 LTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           + + KQ+ +++G  D F PGSRVIITTRD  LL +H   R+   +EV  L+  ++L L  
Sbjct: 318 VDEQKQLQVMVGEPDWFGPGSRVIITTRDKHLLTSHGIDRI---YEVDGLNGEEALELLR 374

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
              F  N   + F  +   V+ YA+G+PLAL+V+GS L G + EEW+S  ++ + +P   
Sbjct: 375 WKTFKNNKVDSSFEYILKYVVTYASGLPLALEVVGSNLFGKNIEEWKSTFDRYEWIPGKR 434

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGK 428
           I K+LKVS+D L+++E+++FLD AC FKG D    ++++      C    K  I  LV K
Sbjct: 435 IHKILKVSFDSLEEDEKSVFLDIACCFKGYDLTEVEFILCAHYGKC---IKYHIGVLVEK 491

Query: 429 SLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP---- 483
           SL+ I+    +T+H L+++MG EIVR+ES K PGKRSRLW  EDI QVL EN        
Sbjct: 492 SLIKINQWGYVTLHHLIEDMGKEIVRKESPKHPGKRSRLWFHEDIVQVLEENMGTTEIEI 551

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL----D 539
             ++    +E+        K+      N++ L +K     + P  + N  R+++      
Sbjct: 552 VYLDFPLFEEVVEWKGDEFKKM----INLKTLIIKNGHFSKGPKHLPNSLRVLEWHRYPS 607

Query: 540 LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+  S        +C L         L G LK+      +    SL         F  I 
Sbjct: 608 LSIPSNFYQKKLSICKLGESFFTTFELHGSLKV-----CVNEFISLVLYTKTILTF-IIV 661

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKTLSNSSTLLTR 649
             +++   + +L L NCK L  + ++ C  +   I  RHC +L T+ +S   L +
Sbjct: 662 LILQKFVNMRELNLDNCKYLTHIFDVSCLPNLEKISFRHCENLMTIDSSVGFLNK 716



 Score = 42.7 bits (99), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 32/192 (16%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L SL+ L L  C +L+ FPEI     NI ++ L+ T+IEEL  S  NL+ L  L +  
Sbjct: 734 MELTSLQRLELSFCDSLECFPEILGEMENITEIVLEGTSIEELSYSFQNLTGLRKLQIRR 793

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKL---------------------------EKLPE 575
            SG+  + S +  +  L  + + G L L                           E L  
Sbjct: 794 -SGVLRLPSNILMMPKLSYILVEGILLLPNKNDNLSSSTSSNVEILRLPNCNLSDEFLQT 852

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
            +    ++ +L+L+   F  +P  +K+   L  L L +C  L+ +  +P     + A  C
Sbjct: 853 SLAWFANVIHLDLSRNSFTILPEFIKECHFLITLNLNDCTCLREIRGIPPNLKRLSALQC 912

Query: 635 TSLKTLSNSSTL 646
            SL +   S  L
Sbjct: 913 ESLSSSCRSMLL 924


>gi|357499385|ref|XP_003619981.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355494996|gb|AES76199.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1151

 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 230/696 (33%), Positives = 329/696 (47%), Gaps = 159/696 (22%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF+SFRG D R +F  +L  AL  + I+TFIDDK              IE S+I+I++
Sbjct: 121 YDVFISFRGTDTRFSFTGNLYKALSDKGIDTFIDDK-------------DIEDSRIAIIV 167

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------- 123
           FS+ YASS + L+ELV I+   N+ G  ++PVFY  +PS     +  Y  +L        
Sbjct: 168 FSKEYASSSFYLDELVHIIHFSNEKGSTIIPVFYGTEPSHVRKLNGSYGEALAKHEEQFQ 227

Query: 124 -----------WMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                      W    +   +            E   IE  V D+S K++ + P    D 
Sbjct: 228 NSKENMERLLKWKKALNQAANLSGHHFNLGNEYERDFIEKIVTDVSNKINHV-PLHVADY 286

Query: 161 LVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG++S I ++ S    GS +    +GI G GG+GKTT++ A+Y++I   FE   F+ N+
Sbjct: 287 LVGLKSRISKVNSLSELGSNDGVCMIGILGTGGMGKTTLSQAVYNSIVHQFEFKCFLHNV 346

Query: 220 RDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITT 279
           R+ S K G      +   +RRL + KVL++  D+  +KQ+ +LIG               
Sbjct: 347 RENSVKHG------IPIIKRRLYQKKVLLIVDDVDKIKQVQVLIGE-------------- 386

Query: 280 RDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGV 339
                      S +G   +   L+   +L L    AF      + +  + N  +KYA+G+
Sbjct: 387 ----------ASWLGR--DTYGLNKEQALELLRTKAFKSKKNDSSYDYILNRAVKYASGL 434

Query: 340 PLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF 399
           PLAL+V+GS L G S  E ES ++K  R+PH DIQK+LKVSYD L +E+Q++FLD AC F
Sbjct: 435 PLALEVVGSNLFGKSIAECESLLDKYDRIPHEDIQKILKVSYDALAEEQQSVFLDIACVF 494

Query: 400 KGNDQYLVMNFL-DACRFSAKIGISRLVGKSLVTISNN---KITMHDLLQEMGGEIVRQE 455
           KG  +  V   L D   +  K  I  LV KSL+ I+     ++T+HDL+++MG EIVRQE
Sbjct: 495 KGRGKEYVQEVLHDHYGYCIKSHIGVLVDKSLIKINGKYIGRVTLHDLIEDMGMEIVRQE 554

Query: 456 SIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDS-------LKELYLGGCSNLKRF- 505
           SIK+PGKRSRLW  +DI  VL E   TS    I L+S       + E      +NLK   
Sbjct: 555 SIKEPGKRSRLWCRDDIVHVLQEKKGTSKIEMIYLNSPSMKPVDMNEKAFKKMTNLKTLI 614

Query: 506 ---------PE-----------ISC-----------NIED-----LDLKETAIEELPSSI 529
                    P+           I C           N ED     LD  ++ I  +P ++
Sbjct: 615 IEKGNFSKGPKYLPSSLVFCKWIGCPSKTLSFLSNKNFEDMKHLILDRSQSLI-HIP-NV 672

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            +L  L+     NC  L  + + +  L  L  L+  GCLKLE  P               
Sbjct: 673 SSLQNLIKFSFENCRNLIKIDNSIWKLNKLEHLSAKGCLKLESFPP-------------- 718

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
                        L  L +L L  C  L+S PEL C
Sbjct: 719 -----------LHLPSLKELELSKCDSLKSFPELLC 743



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 18/177 (10%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           ++L SLKEL L  C +LK FPE+ C   NI++++L +T+I E P S   LS LV L +  
Sbjct: 719 LHLPSLKELELSKCDSLKSFPELLCQMTNIKEINLCDTSIGEFPFSFQYLSELVFLQVNR 778

Query: 543 CSGLK--SVSSRLCNLKS-------LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
              L+    + R+  +         L   NLS     E LP  +    ++  L L + +F
Sbjct: 779 VRMLRFQKYNDRMNPIMFSKMYSVILGETNLSD----ECLPILLKLFVNVTSLKLMKNNF 834

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTR 649
           + +P  + +  +L +L L +CK L+ +  +P     + A  C SL +L +   LL++
Sbjct: 835 KILPECLSECHRLGELVLDDCKFLEEIRGIPPNLGRLSALRCESL-SLESRRRLLSQ 890


>gi|297818518|ref|XP_002877142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322980|gb|EFH53401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 244/744 (32%), Positives = 368/744 (49%), Gaps = 115/744 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA SSSS   +    +DVF SF G+DVR  F+SH    L R+ I  F D+++ +   + P
Sbjct: 1   MAHSSSSCTWV----YDVFPSFSGEDVRVTFLSHFLKELDRKLIIAFKDNEIKKSESLDP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------ 114
            L  AI+ S+I++V+FS  YASS WCLNELV+I++ K ++ Q+V+PVFY +DPS      
Sbjct: 57  VLKQAIKDSRIAVVVFSINYASSTWCLNELVEIVKCKEEFSQMVIPVFYRLDPSHVRKQT 116

Query: 115 -DAG-----YCPS------LGW----------MGIFDIPT-SESVLIEGNVNDISKKLSD 151
            D G      C +      + W          +G       +E+ +IE   ND+  KL  
Sbjct: 117 GDFGKIFEKTCHNKTEEVKIQWKEALTSVANILGYHSTTWFNEAKMIEEIANDVLDKLL- 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           L  S + +  VG+E  I E+   L   S E   VGIWG  GIGKT IA A+++ +S HF 
Sbjct: 176 LTTSRDFEDFVGIEDHISEMSILLQLASKEVRMVGIWGSSGIGKTIIARALFNRLSRHFH 235

Query: 212 GSYFM-QNIRDESEKVGGLAN--------------------------IHLNFERRRLSRM 244
           GS F+ +    +S  +   AN                           HL   R RL   
Sbjct: 236 GSIFIDRAFISKSMNIYSQANSDDYNLKLHMQGKFLSQILDKKDIKVYHLGAMRERLKNR 295

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KVLI   DL D   +D L+G+   F  GSR+I+ T+D   L+ H   ++ H++EV+  S 
Sbjct: 296 KVLICIDDLDDQLVLDALVGQTHWFGCGSRIIVITKDKHFLRAH---KIDHIYEVRLPSE 352

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
             +L +  R+ F Q +P  GFLEL++ V   A  +PL L +L SYL+G  ++EW   + +
Sbjct: 353 EAALEMLCRSTFKQKYPPDGFLELASEVALRAGNLPLGLNILSSYLRGRDKKEWMDMLPR 412

Query: 365 LKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFF---KGNDQYLVMNFLDACRFSAKI 420
           L+      I+K L+VSYDGL++ +++ IF   AC F   K ND  L++   D       I
Sbjct: 413 LRNGLDGKIEKTLRVSYDGLNNKKDKAIFRHIACLFNREKINDIKLLLANSD---LDVTI 469

Query: 421 GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           G+  LV KSL+  S + + MH LLQEMG EIVR +S  +PG+   L   +D   VL +N 
Sbjct: 470 GLKNLVDKSLIHESYDIVEMHSLLQEMGKEIVRMQS-NEPGEHEFLVDWKDTCDVLEDNK 528

Query: 481 S----LPTGINLDSLKELYL-----GGCSNL-------------------KRFPEISCNI 512
                L   +++D + E+++      G  NL                   K F      +
Sbjct: 529 GTKNVLGISLDIDEIDEVHIHENAFKGMRNLFFLKFFTKRQKKEIRWHLSKGFDHFPPKL 588

Query: 513 EDLDLKETAIEELPSSIG--NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
             L  ++  +  +PS+    NL +LV       S L+ +   +  L  L+ +NL G   L
Sbjct: 589 RLLSWEKYPLRCMPSNFHPENLVKLV----MRWSKLEKLWDGVHPLTGLKEINLWGSKNL 644

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCG 626
            ++P ++    +LE L L +     +IPSS++ L++L D  ++ C+ L+ LP    L   
Sbjct: 645 IEIP-DLSMATNLEKLVLNDCSSLMEIPSSIQYLNELYDFHMERCENLEILPTGINLQSL 703

Query: 627 SSIHARHCTSLKTL----SNSSTL 646
             ++   C+ LK+     SN STL
Sbjct: 704 YDLNLMGCSRLKSFPDISSNISTL 727



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 83/156 (53%), Gaps = 22/156 (14%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPTGINL SL +L L GCS LK FP+IS NI  LDL  T IEELPS++ +L  LV+L + 
Sbjct: 694 LPTGINLQSLYDLNLMGCSRLKSFPDISSNISTLDLYGTTIEELPSNL-HLENLVNLRMC 752

Query: 542 NCSG-------------LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
                            LK VS       SL R+ LS    L +LP  I NL  LE L++
Sbjct: 753 EMRSGKLWEREQPLTPLLKMVSP------SLTRIYLSNIPTLVELPSSIHNLHKLEELSI 806

Query: 589 AE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
              K+ E +P+ +  L  L  L L  C +L+  P++
Sbjct: 807 WNCKNLETLPTGI-NLKSLYSLDLSGCSQLRCFPDI 841



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 3/69 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  L L GCS L+ FP+IS NI +L L ETAIEE+P  I N    ++L  
Sbjct: 814 TLPTGINLKSLYSLDLSGCSQLRCFPDISTNISELFLNETAIEEVPWWIEN---FINLSF 870

Query: 541 TNCSGLKSV 549
            NC  L  V
Sbjct: 871 INCGELSEV 879


>gi|332330339|gb|AEE43925.1| TIR-NBS-LRR resistance protein muRdr1A [Rosa multiflora]
          Length = 1119

 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 249/751 (33%), Positives = 364/751 (48%), Gaps = 115/751 (15%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISP 60
           ASS S+       K+DVFLSFRG+D R  F  +L   L R  I TF DD +L RG  ISP
Sbjct: 9   ASSGSAFPW----KYDVFLSFRGEDTRKGFTGYLYHELQRRGIRTFRDDPQLERGTAISP 64

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L +AIE S+ +IV+ S  YASS WCL EL KILE   + G I+ P+FY VDPS      
Sbjct: 65  KLHTAIEQSRFAIVVLSPNYASSTWCLLELSKILECMEERGTIL-PIFYEVDPSHVRHQR 123

Query: 117 ----------------GYCPSLGWMGIFDIPTS-----------ESVLIEGNVNDI-SKK 148
                           G     GW        S           E+ LI   V  + SK 
Sbjct: 124 GSFAEAFQEHEEKLGQGNKEVEGWRDALTKAASLAGWTSKDYRYETQLIREIVQALWSKV 183

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
              L    + ++L G++S ++EI+  L   + +   +GIWG+GGIGKTT A  +Y  IS 
Sbjct: 184 HPSLTVFGSSEKLFGMDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTFARLVYQKISH 243

Query: 209 HFEGSYFMQNIRDESEKVGGL-------------ANIH-------LNFERRRLSRMKVLI 248
            FE   F+ N+R  S   G +              N H       +   +R      VL+
Sbjct: 244 QFEVCIFLANVRQVSATHGLVCLQNQILSQILKEGNDHVWDVYSGITMIKRCFCNKAVLL 303

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  D+   +Q++ L G  D F   SR+IITTRD  +L  H    +   +E+K L  +++L
Sbjct: 304 VLDDVDQSEQLEHLAGEKDCFGLRSRIIITTRDRHVLVTHD---IEKPYELKTLGEDEAL 360

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            LFS  AF ++ P   + + S   ++YA G+PLAL++LGS+L   S + W SA  +LK+ 
Sbjct: 361 QLFSWKAFRKHEPEEDYAKQSKNFVRYAGGLPLALKILGSFLYKRSLDSWSSAFQELKQT 420

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFK--GNDQYLVMNFLDACRFSAKIGISRLV 426
           P+  + ++LK+S+DGL + E+ IFLD ACF +  GN+  +   +  +  F ++I I  LV
Sbjct: 421 PNPKVFEILKISFDGLHEMEKKIFLDIACFPRLYGNESMIEQAY--SSEFFSRIAIEVLV 478

Query: 427 GKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG 485
            KSL+TIS  N + MHDL+QEMG  IVRQE+ ++PG RSRLW   DI+ V  ENT     
Sbjct: 479 EKSLLTISFGNHVYMHDLIQEMGRRIVRQEN-EEPGGRSRLWLRNDIFHVFTENTGTEVT 537

Query: 486 ----INLDSLKE----------------LYLGG---------CSNLKRFPEIS------- 509
               ++LD L+E                LY+             N  RF + S       
Sbjct: 538 ESIFLHLDKLEEADWNLEAFSKMCKLRLLYIHNLRLSLGPKYLPNALRFLKWSWYPSKYL 597

Query: 510 ------CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
                   + +L L  + I+ L + I  L +L  +DL+    L+        + +L +L 
Sbjct: 598 PPGFEPAELAELSLPYSNIDHLWNGIKYLGKLKSIDLSYSINLRRTPD-FTGIPNLEKLI 656

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           L GC  L ++   I  L+ L   NL      + +PS +  +  L    +  C +L+ +PE
Sbjct: 657 LEGCTNLVEIHPSIALLKRLRIWNLRNCTSIKSLPSEV-NMEFLETFDVSGCSKLKMIPE 715

Query: 623 LPCGSSIHARHC---TSLKTLSNSSTLLTRS 650
               +   ++ C   T+++ L +S  LL  S
Sbjct: 716 FVGQTKRLSKFCLGGTAVEKLPSSIELLPES 746



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 39/220 (17%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LK 518
           KR R+W+  +   +     SLP+ +N++ L+   + GCS LK  PE     + L    L 
Sbjct: 674 KRLRIWNLRNCTSI----KSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKRLSKFCLG 729

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNCS----------------------GLKSVSSRLCN 555
            TA+E+LPSSI  L   LV+LDL                            KS    +  
Sbjct: 730 GTAVEKLPSSIELLPESLVELDLNGTVIREQPHSLFLKQNLIVSSFGSFRRKSPQPLIPL 789

Query: 556 LKSLRRLNLSGCLKLE-------KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
           + SL+ L+    LKL        ++P +IG+L SLE L L   +F  +P+S+  LSKL  
Sbjct: 790 IASLKHLSFLTTLKLNDCNLCEGEIPNDIGSLSSLEKLELRGNNFVSLPASIHLLSKLYF 849

Query: 609 LRLQNCKRLQSLPELPCGSSIH--ARHCTSLKTLSNSSTL 646
           + ++NCKRLQ LPELP   S+     +CTSL+   +    
Sbjct: 850 INVENCKRLQQLPELPARQSLRVTTNNCTSLQVFPDPQVF 889


>gi|357468563|ref|XP_003604566.1| Disease resistance protein [Medicago truncatula]
 gi|355505621|gb|AES86763.1| Disease resistance protein [Medicago truncatula]
          Length = 1161

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 200/538 (37%), Positives = 299/538 (55%), Gaps = 57/538 (10%)

Query: 131 PTSESVLIEGNVNDISKKL--SDLFPSDNKDQLVGVESIIKEIESQLL--SGSTEFNTVG 186
           P +E  +I+  V +++  L  +DLF +DN    VGVES ++++  QLL    S +   +G
Sbjct: 249 PVNECEVIKDIVENVTNLLDKTDLFIADNP---VGVESRVQDM-IQLLDTQQSNDVLLLG 304

Query: 187 IWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH------------- 233
           +WG+GGIGKTTIA AIY+ I  +FEG  F+ NIR+  E+V G   +              
Sbjct: 305 MWGMGGIGKTTIAKAIYNKIGRNFEGRSFLANIREVWEQVSGQVYLQEQLMYDIFKETTT 364

Query: 234 --LNFE------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLL 285
              N E      + RL   +VL+V  D+  L Q++ L G    F PGSR+IITTRD  +L
Sbjct: 365 KIQNIESGKSILKERLCHKRVLLVLDDVNKLDQLNALCGSCKWFAPGSRIIITTRDKHIL 424

Query: 286 KNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQV 345
              RG RV  ++ +KE+  ++SL LFS +AF Q  P   + E+S  V+KY+ G+PLAL+V
Sbjct: 425 ---RGDRVDKIYIMKEMDESESLELFSWHAFKQTSPRDDYSEISRNVVKYSGGLPLALEV 481

Query: 346 LGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQY 405
           LGSYL      EW   + KLKR+P+  + K LK+SYDGL+D E++IFLD ACF  G D+ 
Sbjct: 482 LGSYLFDREVSEWICVLEKLKRIPNDQVHKKLKISYDGLNDTEKSIFLDIACFLIGMDRN 541

Query: 406 LVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRS 464
            V+  L+ C   A+IGIS LV +SLVT+ + NK+ MHDLL++MG EI+R++S  +P +RS
Sbjct: 542 DVILILNGCGLFAEIGISVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPMEPEERS 601

Query: 465 RLWHPEDIYQVLNENTSLPT--GINL------------------DSLKELYLGGCSNLKR 504
           RLW+ ED+  +L+E+T      G+ L                    L+ L L G      
Sbjct: 602 RLWYHEDVIDILSEHTGTKAVEGLTLKLPGRSAQRFSTEAFKKMKKLRLLQLSGAQLDGD 661

Query: 505 FPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
           F  +S  +  L      +  +PS+      +V ++L N S +K V   +  ++ L+ LNL
Sbjct: 662 FKYLSKQLRWLHWNGFPLTCIPSNFYQ-RNIVSIELEN-SNVKLVWKEMQRMEQLKILNL 719

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           S    L + P +   L +LE L L +     ++  ++  L K+  + L++C  L +LP
Sbjct: 720 SHSHYLTQTP-DFSYLPNLEKLVLKDCPRLSEVSHTIGHLKKVLLINLKDCTSLSNLP 776



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 9/107 (8%)

Query: 15  KHDVFLSFRGKDVRH--NFVSHLNAALCRE---KIETFIDDKLNRGNEISPSLSSAIEGS 69
           +++VFLSFRG D +   +F SH  ++ CR    +  +F   +    N      ++  EGS
Sbjct: 40  EYEVFLSFRGDDTQCIIHFTSHFFSSKCRNYRLQRRSFRSKRFVHLN----VTTARKEGS 95

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           +ISI++FS+ YA S WC+ EL++ILE     GQ+V+PVFY V PSD 
Sbjct: 96  RISIIVFSKNYADSPWCMQELIQILECYRTTGQVVLPVFYDVYPSDV 142



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           ++ LK L L     L + P+ S   N+E L LK+   + E+  +IG+L +++ ++L +C+
Sbjct: 711 MEQLKILNLSHSHYLTQTPDFSYLPNLEKLVLKDCPRLSEVSHTIGHLKKVLLINLKDCT 770

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++   + +LKSL+ L LSGCL ++KL EE+  +ESL  L        K+P S+
Sbjct: 771 SLSNLPRNIYSLKSLKTLILSGCLMIDKLEEELEQMESLTTLIANNTAITKVPFSV 826


>gi|15238107|ref|NP_198970.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178009|dbj|BAB11461.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007308|gb|AED94691.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1085

 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 234/755 (30%), Positives = 371/755 (49%), Gaps = 117/755 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA SSSS N+    ++ VF SF G DVR  F+SHL+     + I TF D ++ +GN I P
Sbjct: 1   MALSSSSSNI---RRYHVFPSFHGPDVRKGFLSHLHYHFASKGITTFKDQEIEKGNTIGP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------ 114
            L +AI  S++SIV+ S+ YASS WCL+ELV+IL+ K   GQIV+ +FY VDPS      
Sbjct: 58  ELVNAIRESRVSIVLLSKKYASSSWCLDELVEILKCKEDQGQIVMTIFYDVDPSSVRKQK 117

Query: 115 -DAG-----YCP------------------------SLGWMGIFDIPTSESVLIEGNVND 144
            D G      C                         SL W        +E+ +I+    D
Sbjct: 118 GDFGSTFMKTCEGKSEEVKQRWTKALTHVANIKGEHSLNW-------ANEADMIQKIATD 170

Query: 145 ISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYS 204
           +S KLS + PS + + +VG+E+ + ++ S L     +   +GIWG  GIGK+TIA A+Y+
Sbjct: 171 VSTKLS-VTPSRDFEGMVGLEAHLTKLNSLLCFEGDDVKMIGIWGPAGIGKSTIARALYN 229

Query: 205 NISSHFEGSYFMQNIRDESEKVGGLANIHLNFER-------------------------R 239
            +SS F+   FM N++   + + G+   H  F++                          
Sbjct: 230 QLSSSFQLKCFMGNLKGSLKSIVGVD--HYEFQKSLQKLLLAKILNQGDMRVHNLAAIKE 287

Query: 240 RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEV 299
            L   +VLI+  D+ DL+Q+++L   L  F  GSR+I+ T D ++LK H    +  ++ V
Sbjct: 288 WLQDQRVLIILDDVDDLEQLEVLAKELSWFGSGSRIIVATEDKKILKEHG---INDIYHV 344

Query: 300 KELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWE 359
              S  ++L +   +AF Q+    GF EL+  V+     +PL L ++GS L+G S+ EWE
Sbjct: 345 DFPSMEEALEILCLSAFKQSSVPDGFEELAKKVVHLCGNLPLGLSIVGSSLRGESKHEWE 404

Query: 360 SAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
             + +++      I+ +LKV Y+ L  + Q++FL  ACFF       V   L       +
Sbjct: 405 LQLPRIEASLDGKIESILKVGYERLSKKNQSLFLHIACFFNYRSVDYVTVMLADSNLDVR 464

Query: 420 IGISRLVGKSLVTIS-NNKITM-HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
            G+  L  K  V IS N  I M H LLQ++G +IV ++S  +PGKR  L   E+I  VL 
Sbjct: 465 NGLKTLADKCFVHISINGWIVMHHHLLQQLGRQIVLEQS-DEPGKRQFLIEAEEIRAVLT 523

Query: 478 ENTSLPTGINLD---------SLKELYLGGCSNLKRFPEI-------SCNI---EDLDL- 517
           + T   + I +          S+ +    G  NL RF  I        C +   ED++  
Sbjct: 524 DETGTGSVIGISYNTSNIGEVSVSKGAFEGMRNL-RFLRIFNYLFSGKCTLQIPEDMEYL 582

Query: 518 --------KETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
                        + LP+      RL++L + + S L+ +   +  L +++ ++LS  ++
Sbjct: 583 PPLRLLHWDRYPRKSLPTKF-QPERLLELHMPH-SNLEKLWGGIQPLPNIKSIDLSFSIR 640

Query: 570 LEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPC 625
           L+++P  + N  +LE LNL   K   ++PSS+  L KL  L++  C++L+ +P    L  
Sbjct: 641 LKEIP-NLSNATNLETLNLTHCKTLVELPSSISNLHKLKKLKMSGCEKLRVIPTNINLAS 699

Query: 626 GSSIHARHCTSLKTLSN-SSTLLTRSSKHWDIFNF 659
              +   +C+ L+   + SS + T S  +  I NF
Sbjct: 700 LEVVRMNYCSRLRRFPDISSNIKTLSVGNTKIENF 734



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 37/183 (20%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLDL 540
           +PT INL SL+ + +  CS L+RFP+IS NI+ L +  T IE  P S+ G+ SRL  L++
Sbjct: 691 IPTNINLASLEVVRMNYCSRLRRFPDISSNIKTLSVGNTKIENFPPSVAGSWSRLARLEI 750

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +              +SL+ L  +               +S+  LNL+  D  +IP  +
Sbjct: 751 GS--------------RSLKILTHAP--------------QSIISLNLSNSDIRRIPDCV 782

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
             L  L +L ++NC++L ++P LP    S++A  C SLK +  S    T       I  F
Sbjct: 783 ISLPYLVELIVENCRKLVTIPALPPWLESLNANKCASLKRVCCSFGNPT-------ILTF 835

Query: 660 SNC 662
            NC
Sbjct: 836 YNC 838


>gi|297833730|ref|XP_002884747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330587|gb|EFH61006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 975

 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 225/669 (33%), Positives = 333/669 (49%), Gaps = 83/669 (12%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVF SF G+DVR  F+SHL  AL R+ I  F D ++ R   I   L  AI GS+I+IV+F
Sbjct: 11  DVFPSFSGEDVRRTFLSHLLLALDRKLITCFKDSEIQRSQSIGLELVHAIRGSRIAIVVF 70

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YCPS--- 121
           S+ YASS WCLNEL++I++ K + GQ+V+P+FY +DPS       D G      C S   
Sbjct: 71  SKIYASSSWCLNELLEIVKCKEEKGQMVIPIFYALDPSHVRKQTGDFGKAFEMICESKTD 130

Query: 122 ---LGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
              + W   + D+            +E+ LIE   ND+  KL+++ PS      VG+E  
Sbjct: 131 ELQIQWRRALTDVANIHGYHSENWYNEAHLIEEIANDVLGKLNNVTPSMEFLDFVGIEDH 190

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ---------- 217
           + ++   L   S +   VG+WG  GIGKTTIA A++  IS HF+ S F+           
Sbjct: 191 LAKMSLLLCLESEQVRMVGLWGPSGIGKTTIARALFIRISRHFQSSVFIDRAFVSKTMEI 250

Query: 218 ----NIRDESEKVGGLANI-------------HLNFERRRLSRMKVLIVFYDLTDLKQID 260
               N  D + K+    N              HL     RL   KVLIV  DL D   +D
Sbjct: 251 FRGANPDDYNMKLHLQENFLSEILNKKDIKVHHLGAVGERLKHKKVLIVLDDLDDQIVLD 310

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G    F  GSR+++ T+D  LL+ H   R+   ++V   S+  +L +F + AF QN 
Sbjct: 311 ALVGGTQWFGCGSRILVITKDKHLLRAHGIDRI---YKVGPPSHKLALEMFCQYAFRQNS 367

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P  GF EL++ V K A  +PLAL V G YL+G   E+W   + +L++ P+  I+K L+VS
Sbjct: 368 PREGFAELASEVTKGAGNLPLALNVFGLYLRGRDIEDWLDMLPRLRKGPYGKIEKALRVS 427

Query: 381 YDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           YDGL   E++ IF   AC F G +   +   L        IG+  L+  SL+    + + 
Sbjct: 428 YDGLGSKEDKAIFCHIACLFNGMEANDIKLLLADSDLEVNIGLKNLIDNSLIHERGSTVH 487

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKELY 495
           +H L+QEMG EI+R +S K P +R  L   +DI  V N+ +     L   ++L    +L+
Sbjct: 488 IHCLVQEMGKEIIRTQSNK-PREREFLVDSKDIGDVFNDTSGAKKVLGLSLSLAEFDKLH 546

Query: 496 LG--GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV--SS 551
           +       ++    +    + LDL       LP  +      + L   +   ++S+  S 
Sbjct: 547 IDKRAFKRMRNLRFLRIYEDSLDLHNQVRLHLPGGLSYFPPKLKLLCWDGYPMRSLPASF 606

Query: 552 RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
           R  +L  LR  N     KLEKL E    +ES  Y     +D  ++PSS++    L++L +
Sbjct: 607 RAEHLNVLRMRN----SKLEKLWE---GVESSAY----PEDRVELPSSLRN---LNELYM 652

Query: 612 QNCKRLQSL 620
           Q C  L +L
Sbjct: 653 QTCSELVAL 661



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 58/94 (61%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           Q  +E  +L  GINL+SL  L LGGCS    FP IS N+  L L +TAI+E+P  I N S
Sbjct: 653 QTCSELVALSAGINLESLYRLDLGGCSRFWGFPYISKNVSFLILNQTAIKEVPWWIENFS 712

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
           RL+ L++  C  L+ +S ++  LK L +++ S C
Sbjct: 713 RLICLEMRECKRLRYISPKISKLKLLEKVDFSNC 746



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 17/149 (11%)

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           ELPSS+ NL+ L    +  CS L ++S+ + NL+SL RL+L GC +    P    N+   
Sbjct: 639 ELPSSLRNLNELY---MQTCSELVALSAGI-NLESLYRLDLGGCSRFWGFPYISKNVS-- 692

Query: 584 EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ----SLPELPCGSSIHARHC---TS 636
            +L L +   +++P  ++  S+L  L ++ CKRL+     + +L     +   +C   TS
Sbjct: 693 -FLILNQTAIKEVPWWIENFSRLICLEMRECKRLRYISPKISKLKLLEKVDFSNCEALTS 751

Query: 637 LKTLSNSSTLLTRSSKHWD---IFNFSNC 662
              L   S + T  +  +    + NF NC
Sbjct: 752 ASWLDGPSAVATGGNNIYTKLPVLNFINC 780


>gi|357468659|ref|XP_003604614.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505669|gb|AES86811.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1160

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 206/537 (38%), Positives = 300/537 (55%), Gaps = 58/537 (10%)

Query: 133 SESVLIEGNVNDISKKL--SDLFPSDNKDQLVGVESIIKEIESQLL--SGSTEFNTVGIW 188
           +ES +I   V ++++ L  +DLF +DN    VGV+S ++++  QLL    S +   +G+W
Sbjct: 198 NESEVIRDIVENVTRLLDKTDLFIADNP---VGVDSRVQDM-IQLLETQQSNDALLLGMW 253

Query: 189 GIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG-------LANIHL------- 234
           G+GGIGKTTIA +IY+ I  +FEG  F++NIR+  E+  G       L N  L       
Sbjct: 254 GMGGIGKTTIAKSIYNKIGRNFEGRSFLENIREVWEQASGQLYLQERLMNDILKDTTTKI 313

Query: 235 -------NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKN 287
                  +  + RL   +VLIV  D+  L Q++ L G    F PGSR+IITTRD  +L  
Sbjct: 314 QSIESGKSILKERLCHKRVLIVLDDVNKLDQLNALCGSCKWFAPGSRIIITTRDKHIL-- 371

Query: 288 HRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLG 347
            RG +V  ++ +KE+  ++SL LFS +AF Q  P   F E+S  V+KY+ G+PLAL+VLG
Sbjct: 372 -RGKQVDKIYIMKEMDESESLELFSWHAFKQTRPREDFSEISKNVVKYSAGLPLALEVLG 430

Query: 348 SYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYL 406
           SYL      EW S ++KLKR+P+  + K LK+SYDGL DD ++ IFLD +CFF G D+  
Sbjct: 431 SYLFDREILEWRSVLDKLKRIPNDQVHKKLKISYDGLNDDTQKEIFLDISCFFIGMDRND 490

Query: 407 VMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSR 465
           V+  LD C F A IGIS LV +SLVT+ + NK+ MHDLL++MG EI+R++S K+P + SR
Sbjct: 491 VIRILDGCGFFAGIGISVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPKEPEEHSR 550

Query: 466 LWHPEDIYQVLNENT--------------------SLPTGINLDSLKELYLGGCSNLKRF 505
           LW  ED+  VL E+T                    S  T  N+  L+ L L G      F
Sbjct: 551 LWFHEDVIDVLLEHTGTKAVEGLSLKLPGRSAQRFSTKTFENMKKLRLLQLSGVQLDGDF 610

Query: 506 PEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
             +S  +  L      +  +PS+      LV + L N S ++ V   +  ++ L+ LNLS
Sbjct: 611 KHLSRKLRWLQWNGFPLTCIPSNFYQ-RNLVSIVLEN-SNIRLVWKEMQGMEQLKILNLS 668

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
               L + P +   L +LE L L +     +I  S+  L K+  + L++C  L +LP
Sbjct: 669 HSQYLTQTP-DFSYLPNLEKLVLKDCPRLSEISQSIGHLKKILLINLKDCISLCNLP 724



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%), Gaps = 1/103 (0%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R +F SHL  +L    I  F DD+ L RG  IS SL  AIE S+I++
Sbjct: 26  KYDVFLSFRGEDTRASFTSHLTFSLQNAGIIVFKDDQSLERGEHISTSLLQAIEISRIAV 85

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           ++FS+ YA S WCL ELV+I+   +  GQ+V+PVFY VDPS+ 
Sbjct: 86  IVFSKNYADSSWCLRELVQIMSCYSTIGQVVLPVFYDVDPSEV 128


>gi|105923041|gb|ABF81452.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1309

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 245/736 (33%), Positives = 346/736 (47%), Gaps = 152/736 (20%)

Query: 15   KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
            K+ VFLSFRG+D R NF  HL  AL    I TF DD ++ RG  I   L  AI+ SKISI
Sbjct: 331  KYQVFLSFRGEDTRRNFTDHLYKALVDAGIHTFRDDDEIRRGESIDFELQMAIQQSKISI 390

Query: 74   VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY--------------- 118
            ++FS  YASSRWCL+ELV I+E K     IV+PVFY VDPS  G                
Sbjct: 391  IVFSIDYASSRWCLDELVMIMERKRNDDCIVLPVFYDVDPSQVGRQTGSFAATFVEHEKS 450

Query: 119  -----------------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD-- 159
                                L  M + D    E+  ++  V  +SKKL      D K   
Sbjct: 451  FNEDMERVNRWRIALKEVADLAGMVLGD--GYEAQFVQSIVEKVSKKL------DQKMFH 502

Query: 160  ---QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
                 +G + ++  I S L  GS +     ++GIGG+GKT IA ++++     FEG  F+
Sbjct: 503  LPLHFIGRDPLVNYINSWLQEGSHDAAIAILYGIGGVGKTIIAKSVFNQNIHKFEGKSFL 562

Query: 217  QNIR------------------------DESEKVGGLANIHLNFERRRLSRMKVLIVFYD 252
             N R                        DE E   G+  I     +  L   K LIV  D
Sbjct: 563  SNFRSKDIVCLQRQLLSDILKKTIDEINDEDE---GILKI-----KDALCCRKTLIVLDD 614

Query: 253  LTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
            +    Q + +IG  +    GS++I+TTR+  L   +   RV   F+V+ L    SL LFS
Sbjct: 615  VDKRDQFNKIIGMQNWLCKGSKIIVTTRNKGLFSANDIERVE--FKVEPLDNEKSLELFS 672

Query: 313  RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
             NAFGQ  P  GF+E S  ++ + NG+PLAL+V+GS L G   E WESA+ +++ + + +
Sbjct: 673  WNAFGQADPVDGFVEDSWRIVHHCNGLPLALRVIGSLLSGKGREIWESALQQMEVILNFE 732

Query: 373  IQKVLKVSYDGLD-DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
            +QKVL++SYD LD D  +N+FLD ACFF G D    +  LD     A+ GI  L+ + LV
Sbjct: 733  VQKVLRISYDFLDGDYPKNLFLDIACFFNGMDVDDAVRILDGLDKGARFGIDNLIDRCLV 792

Query: 432  TISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINL 488
             I+N+ ++ MH L+++MG EI RQES     K  R+W  ED + VL   T +    G+ L
Sbjct: 793  EINNDQRLWMHQLVRDMGREIARQEST----KCQRIWRHEDAFTVLKGTTDVEKLRGLTL 848

Query: 489  D--------------------------SLKELYLGGCSNLKR--------FPEISC---- 510
            D                          +  +L+L   S+  +        FP +S     
Sbjct: 849  DMHALMEDNFAEVVCTDSMVRRKRRRLNFFQLWLSDFSDGGKLQTGQTSLFPILSTDAFR 908

Query: 511  ---NIEDLDLKET----AIEELPS-------------SIGN---LSRLVDLDLTNCSGLK 547
               ++  L L  T    + E +P              SI N   L +LV LDL+    + 
Sbjct: 909  KMPDVRFLQLNYTKFYGSFEHIPKNLIWLCWHGFSLRSIPNHVCLEKLVVLDLSKSCLVD 968

Query: 548  SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKL 606
            +   +   L  L+ L+L   L L + P+ +G L +LE L L +     +I  S+  L +L
Sbjct: 969  AWKGKPF-LPKLKILDLRHSLNLIRTPDFLG-LPALEKLILEDCIRLVQIHESIGDLQRL 1026

Query: 607  SDLRLQNCKRLQSLPE 622
              L L+NC  L  LPE
Sbjct: 1027 LFLNLRNCTSLVELPE 1042


>gi|297801410|ref|XP_002868589.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314425|gb|EFH44848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1456

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 227/725 (31%), Positives = 356/725 (49%), Gaps = 114/725 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSS  I      ++ VF SF G DVR  F+SHL+     + I TF D ++ RG  I P
Sbjct: 1   MASSSFHIR-----RYHVFPSFHGPDVRRGFLSHLHNHFTSKGITTFKDQEIERGQTIGP 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L  AI  S+IS+V+ S+ Y SS WCL+ELV+IL  K   GQIV+ +FY +D SD     
Sbjct: 56  ELVQAIRESRISVVVLSKSYGSSSWCLDELVEILRCKEDQGQIVMTIFYEIDTSDVRKQS 115

Query: 117 ------------GYCPSLG--WM-GIFDIPT----------SESVLIEGNVNDISKKLSD 151
                       G    +   W+  +  + T          +E+ +++    D+S KL +
Sbjct: 116 GDFGRDFKRTCEGKTEEVKQRWIQALAHVATIAGEHLLNWDNEAAMVQKFATDVSNKL-N 174

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           L  S + D +VG+E+ ++++ S L     E   +GIWG  GIGKTTIA  +++ +S+ F 
Sbjct: 175 LTLSRDFDGMVGMETHLRKLNSLLCLECDEVKMIGIWGPAGIGKTTIARTLFNQLSTSFR 234

Query: 212 GSYFMQNIRDESEKVGGLANI--HLNFERRRLSRM---------------------KVLI 248
              FM N++ + + V G+ +    L  + + LS++                     +VLI
Sbjct: 235 FICFMGNLKGKYKSVVGMDDYDSKLCLQNQLLSKILGQRDMRVHNLGAIKEWLQDQRVLI 294

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           +  D+ D+++++ L      F  GSR+I+TT D ++LK H    V   + V   S  ++L
Sbjct: 295 ILDDVDDIEKLEALAKEPSWFGSGSRIIVTTEDKKILKAHW---VDRFYLVDFPSEEEAL 351

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            +   +AF Q+    GF+EL+N ++++   +PL L V+GS L+G S+ EWE  ++++   
Sbjct: 352 EILCLSAFKQSTVRDGFMELANKIVEFCGYLPLGLSVVGSSLRGESKHEWELQLSRIGTS 411

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
               I+ VL+V YD L  ++Q++FL  ACFF       V   L         G+  LV K
Sbjct: 412 LDRKIEDVLRVGYDKLSKKDQSLFLHIACFFNSKKFDHVTTLLADSNLDVSNGLKTLVEK 471

Query: 429 SLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI 486
           SL++I    I MH LL+++G +IV ++S  +PGKR  L   E+I  VL   T   +  GI
Sbjct: 472 SLISIC-WWIEMHRLLEQLGRQIVIEQS-DEPGKRQFLVEAEEIRDVLENETGTGSVIGI 529

Query: 487 NLDSLKELYLG-------GCSNLK--RFPE-------ISCNI-EDLD------------- 516
           + D  K + L        G  NLK  RF +       +S  I ED+D             
Sbjct: 530 SFDMSKNVKLSISKRAFEGMRNLKFLRFYKADFCPGNVSLRILEDIDYLPRLRLLDWYAY 589

Query: 517 ------------------LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
                             +K + +E+L   I  L  L ++DL+    LK +   L N   
Sbjct: 590 PGKRLPPTFQPEYLIELHMKFSKLEKLWEGIQPLKNLKEIDLSFSYKLKEIPD-LSNASK 648

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           L+ L LS C  L KLP  I NL+ L+ LN++  +  K+  +   L+ L ++ +  C  L+
Sbjct: 649 LKILTLSYCTSLVKLPSSISNLQKLKKLNVSSCEKLKVIPTNINLASLEEVDMSFCSLLR 708

Query: 619 SLPEL 623
           S P++
Sbjct: 709 SFPDI 713



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 30/164 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE-LPSSIGNLSRLVDLDL 540
           +PT INL SL+E+ +  CS L+ FP+IS NI+ L++  T IE+  PSS   LS L +L +
Sbjct: 687 IPTNINLASLEEVDMSFCSLLRSFPDISRNIKKLNVVSTQIEKGSPSSFRRLSCLEELFI 746

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
                           +SL RL          +P       SL+ L+++    EKIP  +
Sbjct: 747 GG--------------RSLERLT--------HVP------VSLKKLDISHSGIEKIPDCV 778

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
             L +L  L +++C +L SL  LP    S++A++C SL+ +  S
Sbjct: 779 LGLQQLQSLIVESCTKLVSLTSLPPSLVSLNAKNCVSLERVCCS 822



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 34/50 (68%)

Query: 62   LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLV 111
            +  AI  S +SI++  + YASSRWCL+ELV+I++ K   G IV+ VF  +
Sbjct: 1192 IGPAIRESSVSILVLPKKYASSRWCLDELVEIVKCKEGLGLIVMTVFQWI 1241



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 45/79 (56%)

Query: 308  LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
            LT+F  +AF Q+ P  GF EL+  V +    +PL L V+   L+G S+ EW+  +++++ 
Sbjct: 1014 LTIFCLSAFTQSSPQDGFEELTKKVAELCGNLPLGLYVVDLSLRGESKHEWKLQLSRIET 1073

Query: 368  MPHMDIQKVLKVSYDGLDD 386
                 I+ VL +S +  +D
Sbjct: 1074 TLDSKIEDVLTISMEEAED 1092


>gi|82542041|gb|ABB82028.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
          Length = 885

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 217/679 (31%), Positives = 331/679 (48%), Gaps = 139/679 (20%)

Query: 91  VKILE-SKNKYGQIVVPVFYLVDPSD-----AGYCPSL---------------------- 122
            +ILE  K K GQIV+P+FY +DPSD       +  +                       
Sbjct: 32  TRILECKKRKTGQIVLPIFYDIDPSDVRKQNGSFAEAFVKHEERFEEKLVKEWRKALEEA 91

Query: 123 ----GWMGIFDIPTS-ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLS 177
               GW  + D+    E+  I+  + D+  KL   +  D  + LVG++ + + I   L +
Sbjct: 92  GNLSGW-NLNDMANGHEAKFIKEIIKDVLNKLDPKY-LDVPELLVGMDRLSRNIFDFLST 149

Query: 178 GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFE 237
            + +   VGI G+ GIGKTTIA  +++ +   FEGS F  NI + S++  GLA +     
Sbjct: 150 ATHDVRIVGIHGMPGIGKTTIAKVVFNQLRYRFEGSCFFSNINETSKQFNGLALLQEQLL 209

Query: 238 ---------------------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVI 276
                                + RL R +VL+V  D+T   Q++ L+G    F PGSRVI
Sbjct: 210 HDILKQDVANINCVDRGKVLIKERLRRKRVLVVADDVTRQDQLNALMGERGWFGPGSRVI 269

Query: 277 ITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYA 336
           ITTRD   L      +    ++++EL  ++S  LFS +A     PA  ++ELS  V+ Y 
Sbjct: 270 ITTRDSSFL-----HKADQTYQIEELKPDESFQLFSWHALRDTKPAEDYIELSKDVVDYC 324

Query: 337 NGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE-QNIFLDT 395
            G+PLAL+V+G+ L G + + W+S ++KL+R+P+ DIQ  L++S+D LD EE QN FLD 
Sbjct: 325 GGIPLALEVMGACLSGKNRDGWKSVIDKLRRIPNRDIQGKLRISFDALDGEELQNAFLDI 384

Query: 396 ACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQ 454
           ACFF    +  V   L A C ++ ++ +  L  +SL+ +    +TMHDLL++MG E+VR+
Sbjct: 385 ACFFIDRKKEYVAKVLGARCGYNPEVDLQTLHERSLIKVLGETVTMHDLLRDMGREVVRE 444

Query: 455 ESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD----SLKELYLGG-----CSN-- 501
           +S K PG+R+R+W+ ED + VL +   T +  G+ LD      K L  G      C N  
Sbjct: 445 KSPKQPGERTRIWNQEDAWNVLEQQKGTDVVEGLALDVRASEAKSLSAGSFAEMKCLNLL 504

Query: 502 ---------------------------LKRFPEISC--NIEDLDLKETAIEELPSSIGNL 532
                                      LK FP      N+  LD++ + ++EL      L
Sbjct: 505 QINGVHLTGSFKLLSKELMWICWLQCPLKYFPSDFTLDNLAVLDMQYSNLKELWKGKKIL 564

Query: 533 SRLVDLDLTN----------------------CSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           +RL  L+L++                      CS L  V   + NL SL  LNL GC +L
Sbjct: 565 NRLKILNLSHSQHLIKTPNLHSSSLEKLILKGCSSLVEVHQSIENLTSLVFLNLKGCWRL 624

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL---RLQNCKRLQSLPELPCG 626
           + LPE IGN++SL+ LN++     EK+P  M  +  L+ L    ++N + L S+ +L   
Sbjct: 625 KNLPERIGNVKSLKTLNISGCSQLEKLPERMGDMESLTKLLADGIENEQFLSSIGQL--- 681

Query: 627 SSIHARHCTSLKTLSNSST 645
                +HC  L    +SST
Sbjct: 682 -----KHCRRLSLHGDSST 695



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 22/180 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIE--ELPSSIGNLSRLV 536
           +LP  I N+ SLK L + GCS L++ PE   ++E L  L    IE  +  SSIG L    
Sbjct: 626 NLPERIGNVKSLKTLNISGCSQLEKLPERMGDMESLTKLLADGIENEQFLSSIGQLKHCR 685

Query: 537 DLDLTNCSGLKS----VSSRLCNLK-----------SLRRLNLSGCLKLEKLPE--EIGN 579
            L L   S        +S+ + N K           S++ L LS     ++     +   
Sbjct: 686 RLSLHGDSSTPPSSSLISTGVLNWKRWLPASFIEWISVKHLELSNSGLSDRATNCVDFSG 745

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
           L +LE L+L    F ++PS +  L KL+ L ++ CK L S+P+LP     + A  C SLK
Sbjct: 746 LSALEKLDLTGNKFSRLPSGIGFLPKLTYLSVEGCKYLVSIPDLPSSLGHLFACDCKSLK 805


>gi|82794024|gb|ABB91439.1| MRGH-J [Cucumis melo]
          Length = 1007

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 231/742 (31%), Positives = 361/742 (48%), Gaps = 128/742 (17%)

Query: 1   MASSSSSINMIPH---PKH--DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNR 54
           MASS+++    P    P++  DVFLSFRG D R+N  + L  AL R+ I  F DD +L R
Sbjct: 1   MASSTTTKESSPFSSSPRYIFDVFLSFRGVDTRNNITNLLYEALRRQGIIVFRDDDELER 60

Query: 55  GNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
           G  I+ +L+++I  S+ +IVI S+ YA S+WCL ELV+I++ KN + QIV+ VFY + PS
Sbjct: 61  GKAIANTLTNSIRQSRCTIVILSKRYADSKWCLRELVEIVKCKNSFNQIVLVVFYKIKPS 120

Query: 115 DAGYCPSL--------------------GWMGIFDI-------PTSESVLIEGNVNDISK 147
           D      +                     W    ++         +E    E  V  I K
Sbjct: 121 DVNSPTGIFEKFFVDFENDVKENFEEVQDWRNAMEVVGGLTPWVVNEQTETE-EVQKIVK 179

Query: 148 KLSDLFPSD---NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYS 204
              DL   D   + + LVG+   +K++   +  G  +   +GIWG+GG+GKTTIA A++ 
Sbjct: 180 HAFDLLRPDLLSHDENLVGMNLRLKKMNMLMGIGLDDKRFIGIWGMGGVGKTTIAKAVFK 239

Query: 205 NISSHFEGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRM 244
           +++  F GS  ++N++   + V GL ++                     +   ++ L   
Sbjct: 240 SVAREFHGSCILENVKKTLKNVRGLVSLQEKLLSDTLMRGKVQIKDGEGVEMIKKNLGNR 299

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KV +V  D+    Q+  L G  + F  GSR+IITTRD  LL       +   + V+    
Sbjct: 300 KVFVVLDDVDHFSQVKDLAGGEEWFGCGSRIIITTRDEGLL---LSLGIDIRYNVESFGD 356

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
            ++L LF   AFG   P  G+L+L    ++YA G+PLA++ LG  L     + WE A+ K
Sbjct: 357 EEALQLFCHEAFGVKFPKKGYLDLCMPFVEYAEGLPLAIKALGHSLHNRLFKSWEGAIRK 416

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF-----LDAC----- 414
           L    +  + + LK+SYD L  EE+ IFL  ACF KG  + LV++      +DA      
Sbjct: 417 LNNSLNRQVYENLKISYDALGKEERRIFLYIACFLKGQSKDLVIDTFVSFEIDAADGLLT 476

Query: 415 ----------RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRS 464
                     + +A   + +L  KSL+T+ N+KI MH+L Q++G EI R+ES +   K S
Sbjct: 477 RKKAADVLCIKETAADALKKLQEKSLITVVNDKIQMHNLHQKLGQEIFREESSR---KSS 533

Query: 465 RLWHPEDIYQVL----------------NE------NT---SLPTGINLDSLKELYLGG- 498
           RLWH ED+   L                NE      NT   S  TG+ +  +  ++L G 
Sbjct: 534 RLWHREDMNHALRHKQGVEAIETIALDSNEHGESHLNTKFFSAMTGLKVLRVHNVFLSGD 593

Query: 499 ----CSNLK-------RFPEISCNIE-----DLDLKETAIEELPSSIGNLSRLVDLDLTN 542
                S L+        F  +  + +     +L+L+ + IE        L +L  ++L+N
Sbjct: 594 LEYLSSKLRLLSWHGYPFRNLPSDFQPNELLELNLQNSCIENFWRETEKLDKLKVINLSN 653

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMK 601
              L      L  + +L RL L+GC++L++L   +G L+ L +L+L + K  + I S++ 
Sbjct: 654 SKFLLKTPD-LSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDCKSLKSICSNI- 711

Query: 602 QLSKLSDLRLQNCKRLQSLPEL 623
            L  L  L L  C RL++ PE+
Sbjct: 712 SLESLKILILSGCSRLENFPEI 733



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 16/190 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S+ + I+L+SLK L L GCS L+ FPEI  N++   +L L  TAI +L +SIG L+ LV 
Sbjct: 706 SICSNISLESLKILILSGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVL 765

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL NC  L ++ + +  L S++ L L GC KL+++P+ +GN+  LE L+++      IP
Sbjct: 766 LDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISCLEKLDVSGTSISHIP 825

Query: 598 SSMKQLSKLSDLRLQN-----CKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
            S++ L+ L  L  +      C  L  L   P  +  H+     +   SN  ++      
Sbjct: 826 LSLRLLTNLKALNCKGLSRKLCHSLFPLWSTPRSNDSHSFGLRLITCFSNFHSV------ 879

Query: 653 HWDIFNFSNC 662
              + NFS+C
Sbjct: 880 --KVLNFSDC 887



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 94/192 (48%), Gaps = 41/192 (21%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRL 535
           +LP  I  L S+K L LGGCS L + P+    ISC +E LD+  T+I  +P S   L  L
Sbjct: 776 TLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISC-LEKLDVSGTSISHIPLS---LRLL 831

Query: 536 VDLDLTNCSGLKSVSSRLC---------------------------NLKSLRRLNLSGC- 567
            +L   NC GL   S +LC                           N  S++ LN S C 
Sbjct: 832 TNLKALNCKGL---SRKLCHSLFPLWSTPRSNDSHSFGLRLITCFSNFHSVKVLNFSDCK 888

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG- 626
           L    +P+++  L SL +L+L+   F  +P+S+ QL  L  L L NC RL+SLP+ P   
Sbjct: 889 LADGDIPDDLSCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSL 948

Query: 627 SSIHARHCTSLK 638
             + AR C SLK
Sbjct: 949 LYVLARDCVSLK 960



 Score = 43.1 bits (100), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 28/162 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDL---- 540
           LD LK + L     L + P++S   N+E L L     ++EL  S+G L  L+ LDL    
Sbjct: 643 LDKLKVINLSNSKFLLKTPDLSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDCK 702

Query: 541 -------------------TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
                              + CS L++    + N+K L  L+L G   + KL   IG L 
Sbjct: 703 SLKSICSNISLESLKILILSGCSRLENFPEIVGNMKLLTELHLDGT-AIRKLHASIGKLT 761

Query: 582 SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           SL  L+L   K+   +P+++  L+ +  L L  C +L  +P+
Sbjct: 762 SLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQIPD 803


>gi|297794611|ref|XP_002865190.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311025|gb|EFH41449.1| hypothetical protein ARALYDRAFT_494325 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1127

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 231/725 (31%), Positives = 365/725 (50%), Gaps = 108/725 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G+DVR+ F+SH    L  + I +F D+++ R   + P L   I  S+I++V+
Sbjct: 14  YDVFPSFSGEDVRNTFLSHFLKELDSKLIISFKDNEIERSQSLDPELKHGIRNSRIAVVV 73

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YC---- 119
           FS+ YASS WCLNEL++I++ K ++GQ+V+P+FY +DPS       D G      C    
Sbjct: 74  FSKNYASSSWCLNELLEIVKCKKEFGQLVIPIFYHLDPSHVRKQTGDFGKIFEKTCRNKT 133

Query: 120 --PSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W   + D+            +E+ +I+   NDI  K+ +L PS++ + LVG+E 
Sbjct: 134 VDEKIRWKEALTDVANILGYHIVTWDNEASMIKEIANDILGKI-NLSPSNDFEDLVGIED 192

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR-DESEK 225
            I  + S L   S E   VGIWG  GIGKTTIA A++S +S  F+ S F+  +   +S +
Sbjct: 193 HITRMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSQLSCQFQSSVFIDRVFISKSME 252

Query: 226 VGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQID------------------------- 260
           V   AN+ +++  +   +   L  F+D  D+K ID                         
Sbjct: 253 VYSGANL-VDYNMKLHLQRAFLAEFFDKKDIK-IDHIGAMENMVKHRKALIVIDDLDDQD 310

Query: 261 ---LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
               L GR   F  GSR+I+ TR+   L   R + + H+++V   S   +L +F R+AF 
Sbjct: 311 VLDALAGRTQWFGSGSRIIVVTRNKHFL---RANGIDHIYKVCLPSNALALEMFCRSAFR 367

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD--IQK 375
           ++ P  GF+ELS+ V   A  +PL L VLGS L+G  +  W   ++ L R+  +D  I K
Sbjct: 368 KSSPPDGFMELSSEVALRAGNLPLGLNVLGSNLRGRDKGYW---IDMLPRLQGLDGKIGK 424

Query: 376 VLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            L+VSYDGL++ +++ IF   AC F G     +   L        IG+  LV +SL+   
Sbjct: 425 TLRVSYDGLNNRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICER 484

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDS 490
            N + MH LLQEMG EIVR +S  +PG+R  L   +DI  VL +N      L   +++D 
Sbjct: 485 FNTVEMHSLLQEMGKEIVRTQS-DEPGEREFLVDLKDICDVLEDNAGTKKVLGITLDIDE 543

Query: 491 LKELYL-----GGCSNL---------------------KRFPEISCNIEDLDLKETAIEE 524
             EL++      G  NL                     +RF  +   +  L      ++ 
Sbjct: 544 TDELHIHESSFKGMHNLLFLKIYTKKLDQKKEVRWHLPERFNYLPSKLRLLRFDRYPLKR 603

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           LPS+  +   LV L +   S L+ +   + +L  LR ++L G   L+++P ++    +LE
Sbjct: 604 LPSNF-HPENLVKLQMQQ-SKLEKLWEGVHSLAGLRNMDLRGSKNLKEIP-DLSMATNLE 660

Query: 585 YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTL 640
            L L+      ++PSS++ L+KL+DL +  C  L+++P    L     ++   C+ LK+ 
Sbjct: 661 TLKLSSCSSLVELPSSIQYLNKLNDLDISYCDHLETIPTGVNLKSLYRLNLSGCSRLKSF 720

Query: 641 SNSST 645
            + ST
Sbjct: 721 LDIST 725



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 56/91 (61%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            +LPTGINL+SL  L L  CS L+ FP+IS NI DL L  TAIEE+P  I  LS L +LD
Sbjct: 806 VTLPTGINLESLIALDLSHCSQLRTFPDISTNISDLKLSYTAIEEVPLWIEKLSLLCNLD 865

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           +  CS L  VS  +  LK L   + S C+ L
Sbjct: 866 MNGCSNLLRVSPNISKLKHLEGADFSDCVAL 896



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 54/231 (23%)

Query: 467 WHPEDIYQVLNENTSLPT---GIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE- 519
           +HPE++ ++  + + L     G++ L  L+ + L G  NLK  P++S   N+E L L   
Sbjct: 608 FHPENLVKLQMQQSKLEKLWEGVHSLAGLRNMDLRGSKNLKEIPDLSMATNLETLKLSSC 667

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE-------- 571
           +++ ELPSSI  L++L DLD++ C  L+++ + + NLKSL RLNLSGC +L+        
Sbjct: 668 SSLVELPSSIQYLNKLNDLDISYCDHLETIPTGV-NLKSLYRLNLSGCSRLKSFLDISTN 726

Query: 572 ----------KLPEEIGNLESLEYLNLAEK------------------------DFEKIP 597
                     ++P  +  L++L+ L L E+                           ++P
Sbjct: 727 ISWLDIDQTAEIPSNL-RLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNQSLVEVP 785

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           SS++ L++L  L + NC+ L +LP    L    ++   HC+ L+T  + ST
Sbjct: 786 SSIQNLNQLEHLEIMNCRNLVTLPTGINLESLIALDLSHCSQLRTFPDIST 836



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 48/181 (26%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA------------------- 521
           ++PTG+NL SL  L L GCS LK F +IS NI  LD+ +TA                   
Sbjct: 696 TIPTGVNLKSLYRLNLSGCSRLKSFLDISTNISWLDIDQTAEIPSNLRLQNLDELILCER 755

Query: 522 -------------------------IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
                                    + E+PSSI NL++L  L++ NC  L ++ + + NL
Sbjct: 756 VQLRTPLMTMLSPTLTRLTFSNNQSLVEVPSSIQNLNQLEHLEIMNCRNLVTLPTGI-NL 814

Query: 557 KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
           +SL  L+LS C +L   P+   N+  L+   L+    E++P  +++LS L +L +  C  
Sbjct: 815 ESLIALDLSHCSQLRTFPDISTNISDLK---LSYTAIEEVPLWIEKLSLLCNLDMNGCSN 871

Query: 617 L 617
           L
Sbjct: 872 L 872


>gi|297846862|ref|XP_002891312.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337154|gb|EFH67571.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1159

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 230/719 (31%), Positives = 349/719 (48%), Gaps = 137/719 (19%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KH VF SF G DVR  F+SH+   L  + I+ FID+ + R   ISP+L  AI GS+I+IV
Sbjct: 56  KHHVFPSFHGADVRKAFLSHILKELKSKGIDPFIDNDIERSKAISPALIEAIRGSRITIV 115

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSE 134
           + S  YASS WCLNELV I++  +++GQIV+ +             S+ W+   D   +E
Sbjct: 116 VLSRNYASSTWCLNELVDIMKCMDEFGQIVMTI-------------SMKWIHQTD---TE 159

Query: 135 SVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIG 194
           +V++     DIS KL++  PS +   LVG+ + +++++  L   S E   +GIWG  GIG
Sbjct: 160 AVMVGKIATDISNKLNNSTPSRDFIGLVGMGAHMEKMKPLLCLESDEVRMIGIWGPSGIG 219

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLT 254
           +                                GL      F          L++  D+ 
Sbjct: 220 R--------------------------------GLYKKEFLF----------LVILDDVD 237

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
            L Q+D L      F PGSRVIIT  D +LL+ H    + H+++V   S  +++ +F  N
Sbjct: 238 RLGQLDALAKETRWFGPGSRVIITMEDRKLLQGHG---INHIYKVDFPSTEEAVQIFCMN 294

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AFGQN P  GF  L+  V   A  +PL L+V+GSY +GMS+EEW+SA+ +L+     +I+
Sbjct: 295 AFGQNSPKDGFEGLAWEVANLAGELPLGLKVMGSYFRGMSKEEWKSALPRLRTSLDGEIE 354

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGKSLVTI 433
            ++  SYD L D+++ +FL  ACFF   +   V   L A +FS  K G+  L  KSL++I
Sbjct: 355 SIINFSYDALSDKDKELFLHIACFFNHKEMEKVEEHL-AKKFSYLKQGLHVLADKSLISI 413

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP---TGINLD- 489
           ++  + MH+LL ++G EIV ++SI +PG+R  L    +I +VL ++ +      GI L+ 
Sbjct: 414 NSTYMEMHNLLAQLGREIVCRQSINEPGQRQFLIDSREICEVLTDDATGSRNVIGIELNF 473

Query: 490 -------SLKELYLGGCSNLK---------------------------------RFPEIS 509
                  ++ E    G SNL+                                  FP ++
Sbjct: 474 GESEDELNISERGFEGMSNLQFLRIYSDHINPGKMFLPQGLNYLSRKLRLLHWIHFP-MT 532

Query: 510 C-----NIE---DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
           C     N E   +L +  + +E+L   I  L  L  +DL++   LK V   L    +L+ 
Sbjct: 533 CFPSIVNPEFLVELVMCHSKLEKLWEGIKPLRNLKWMDLSSSVNLK-VLPDLSTATNLKE 591

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           L+ S C  L KLP  IGN  +LE LNL +  +  ++PSS+  L  +     + C  L  L
Sbjct: 592 LDCSFCSSLVKLPFSIGNAINLEILNLYDCSNLVELPSSIGNLINIKKFNFRRCSSLVEL 651

Query: 621 P----------ELPCGSS-----IHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           P          EL  G++     ++  +C+SL  L  S    +    H   F  S CSN
Sbjct: 652 PSSVGKATKLEELELGNATNLKELYLYNCSSLVKLPFSIGTFS----HLKKFKISGCSN 706



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  INL SL+ L L  CS LK FPEIS NI  LDL  TAIEE+P SI   SRL  L ++
Sbjct: 831 LPININLQSLEALILTDCSLLKSFPEISTNISYLDLSGTAIEEVPLSISLWSRLETLHMS 890

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK+                         P     L+ +  L+L++   +++   +K
Sbjct: 891 YSENLKN------------------------FPHA---LDIITDLHLSDTKIQEVAPWVK 923

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           ++S+L  L L+ C +L SLP+LP   S + A +C SL+ L  S
Sbjct: 924 RISRLRRLVLKGCNKLLSLPQLPDSLSELDAENCESLERLDCS 966



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 7/169 (4%)

Query: 487 NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETA-IEELPSSIGNLSRLVD-LDLT 541
           N   LKEL    CS+L   P     + N+E LDL+  + + +LPSSIGN    +D LD +
Sbjct: 716 NATDLKELDFSFCSSLVELPSYIGNATNLELLDLRGCSNLVQLPSSIGNAIVTLDRLDFS 775

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
            CS L ++ S +    +L+ L  SG   L +LP  IGNL  L  L L      E +P ++
Sbjct: 776 GCSSLVAIPSSIGKAINLKYLEFSGYSSLVELPASIGNLHKLSSLTLNRCSKLEVLPINI 835

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
             L  L  L L +C  L+S PE+    S      T+++ +  S +L +R
Sbjct: 836 -NLQSLEALILTDCSLLKSFPEISTNISYLDLSGTAIEEVPLSISLWSR 883



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 12/143 (8%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           LP+ +     L+EL LG  +NLK     +C         +++ +LP SIG  S L    +
Sbjct: 651 LPSSVGKATKLEELELGNATNLKELYLYNC---------SSLVKLPFSIGTFSHLKKFKI 701

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSS 599
           + CS L  +SS + N   L+ L+ S C  L +LP  IGN  +LE L+L    +  ++PSS
Sbjct: 702 SGCSNLVKLSSSIGNATDLKELDFSFCSSLVELPSYIGNATNLELLDLRGCSNLVQLPSS 761

Query: 600 M-KQLSKLSDLRLQNCKRLQSLP 621
           +   +  L  L    C  L ++P
Sbjct: 762 IGNAIVTLDRLDFSGCSSLVAIP 784


>gi|215261579|gb|ACJ64859.1| disease resistance protein RPP1-like protein R5 [Arabidopsis
           thaliana]
          Length = 1202

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 233/739 (31%), Positives = 359/739 (48%), Gaps = 113/739 (15%)

Query: 6   SSINMIPHP--------KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNE 57
           SS+  +P P        KH VF SF G+DVR   +SH+  +  R+ I+TF D+ + R   
Sbjct: 133 SSVLALPCPPTSVSRIWKHHVFPSFHGEDVRKTILSHILESFRRKGIDTFSDNNIERSKS 192

Query: 58  ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-A 116
           I   L  AI GSKI+IV+ S+ YASS WCL+EL +I++ +   GQIV+ +FY VDP+D  
Sbjct: 193 IGLELKEAIRGSKIAIVLLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIK 252

Query: 117 GYCPSLG-----------------WM-GIFDIPT----------SESVLIEGNVNDISKK 148
                 G                 W   + D+ T          +E+ +IE    ++S  
Sbjct: 253 KQTGDFGKAFKKTCNGKTKEHVERWRKALEDVATIAGEHSRNWRNEAAMIEKIATNVSNM 312

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L+   PS + D LVG+ + +  +E  L     E   +GIWG  GIGKTTIA  +++ +S 
Sbjct: 313 LNSCTPSRDFDGLVGMRAHMDRMEHLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSD 372

Query: 209 HFEGSYFMQNIR--------DESE-----KVGGLANI---------HLNFERRRLSRMKV 246
            F+ S  + NIR        DE       +   L+ I         +L   + RL   KV
Sbjct: 373 RFQLSAIIVNIRGIYPRLRLDEYSAQMEVQQKMLSTIFSQKDIIVPNLGVAQERLKDKKV 432

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
            +V  ++  ++Q+D L      F PGSR+IITT DV++L  HR   + HV++VK  S ++
Sbjct: 433 FLVLDEVDHIRQLDALAKETRWFGPGSRIIITTEDVRVLNAHR---INHVYKVKFPSSDE 489

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +  +F  NAFGQ  P  GF +L+  V+  A  +PL L+VLGS L+GMS+ EWE  + K+K
Sbjct: 490 AFQIFCMNAFGQKQPHEGFCKLAWEVMALAGNLPLGLKVLGSALRGMSKPEWERTLPKIK 549

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
                +I+ ++K S+D L DE++++FL  ACFF G   + V   L       +  +  LV
Sbjct: 550 YCLDGEIKSIIKFSFDALCDEDKDLFLYIACFFNGIKLHKVEGVLAKKFLDVRQSLHVLV 609

Query: 427 GKSLVTISNNK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG 485
            KSL++I+ +  I  H +L++ G E  R++ +    K   L    DI +VLN++T     
Sbjct: 610 EKSLISINQSGLIETHTVLKQFGRETSRKQFVHGFAKPQFLVDARDICEVLNDDT----- 664

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP-------SSIGNLSRLVDL 538
                         +  + + E     E+L + E A+E +        ++  +  RL  L
Sbjct: 665 -------------IAFYRDYTE-----EELSISEKALERMHDFQFVRINAFAHPERLHSL 706

Query: 539 -------DLTNCSGLKSVSSRLC-NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA- 589
                   L + S LK +      N + L  L +    KL KL E    L++L +++L  
Sbjct: 707 LHHSQKIRLLHWSYLKDICLPCTFNPEFLVELGMYAS-KLHKLWEGTKQLQNLRWMDLCY 765

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
            +D  K+P  +   + L DL L+NC    SL  +PC  SI       +  LS+ S L+  
Sbjct: 766 SRDLTKLP-DLSTATNLEDLILRNC---SSLVRIPC--SIENATNLQILDLSDCSNLVEL 819

Query: 650 SS----KHWDIFNFSNCSN 664
            S       +  N +NCS+
Sbjct: 820 PSIGNATRLEELNLNNCSS 838



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 81/159 (50%), Gaps = 28/159 (17%)

Query: 483  PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
            P+  +  +LK+L + GCS LK FPEIS NIE ++L ETAI+E+P SI + S         
Sbjct: 890  PSIASATNLKKLDISGCSQLKCFPEISTNIEIVNLIETAIKEVPLSIMSWS--------- 940

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
                              RL+  G    E L E    L+ +  L L  +D ++IP  +K 
Sbjct: 941  ------------------RLSYFGMSYFESLNEFPHALDIITDLVLIREDIQEIPPWVKG 982

Query: 603  LSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            +S+L  LRL +CK L SLP+L      I A +C SL+ L
Sbjct: 983  MSRLGVLRLYDCKNLVSLPQLSDNLEYIVADNCQSLERL 1021



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 10/150 (6%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKETA-IEELPSSIGNLSRL 535
           T LP      +L++L L  CS+L R P   E + N++ LDL + + + ELPS IGN +RL
Sbjct: 770 TKLPDLSTATNLEDLILRNCSSLVRIPCSIENATNLQILDLSDCSNLVELPS-IGNATRL 828

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--EEIGNLESLEYLNLAEKDF 593
            +L+L NCS L  + S + N  +L++L L  C ++ +LP  E   NL+ L+  N +    
Sbjct: 829 EELNLNNCSSLVKLPSSI-NATNLQKLFLRNCSRVVELPAIENATNLQVLDLHNCSS--L 885

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            ++P S+   + L  L +  C +L+  PE+
Sbjct: 886 LELPPSIASATNLKKLDISGCSQLKCFPEI 915


>gi|297848110|ref|XP_002891936.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337778|gb|EFH68195.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1064

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 242/740 (32%), Positives = 363/740 (49%), Gaps = 112/740 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           + ++F SF G DVR +F+SHL        I  F D  + R   I+PSL  AI  S+I IV
Sbjct: 13  RFNIFSSFHGPDVRKSFLSHLRKQFNYNGITMFDDQGIERSETIAPSLIQAIRESRILIV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAGYCPS------ 121
           I S  YASS WCLNELV+I+E K   GQIV+ +FY VDP+       D G   S      
Sbjct: 73  ILSTNYASSSWCLNELVEIMECKKVMGQIVMTIFYGVDPTHVRKQIGDFGKAFSETCSRN 132

Query: 122 -----LGW-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+            +E+ +IE    D+S+KL +  PS +   +VG+E
Sbjct: 133 TDVEMRKWSKALTDVSNILGEHLLNWDNEANMIEKVAGDVSRKL-NATPSRDFADMVGLE 191

Query: 166 SIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR---- 220
             +K+IE  L L+       VGI G  GIGKTTIA A++S +SS F+ S FM+N+R    
Sbjct: 192 EHLKKIEFLLHLNHDDGAMIVGICGPAGIGKTTIARALHSLLSSSFQLSCFMENLRGSYN 251

Query: 221 ---DE-----------SEKV---GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE             K+    G+   HL     RL   KVLI+  D+ DLKQ++ L 
Sbjct: 252 SGLDEYGLKLCLQQQLLSKILNQNGMRVYHLGAIHERLCDRKVLIILDDVNDLKQLEALA 311

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+I+TT D +LL+ H    + + ++V   S   SL +  R AF Q+ P  
Sbjct: 312 DETRWFGPGSRIIVTTEDQELLQQH---GINNTYQVGFPSKEISLKILCRYAFRQSFPHH 368

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR-MPHMDIQKVLKVSYD 382
           GF EL+  + K    +PL L+V+GS L+G  EEEWE  + +L+  + H DI++VL+V Y+
Sbjct: 369 GFKELALRLTKLCGNLPLGLRVVGSSLRGKKEEEWEEVMCRLETILDHRDIEEVLRVGYE 428

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITMH 441
            L + E+++FL  A FF   D  +V   L       K G+  LV KSL+ IS  + I MH
Sbjct: 429 SLHENEKSLFLHIAVFFNHKDGDIVNAMLAETNLDIKHGLRILVNKSLIYISTKREIVMH 488

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS--LPTGINLDS-------LK 492
            LLQ++G +++ ++   +P KR  L    +I  VL  +T     +GI+ D+       + 
Sbjct: 489 KLLQQVGRQVIHRQ---EPWKRQILIDAHEICDVLENDTGNRAVSGISFDTSGIAEVIIS 545

Query: 493 ELYLGGCSNL--------------------------------------KRFPEISC--NI 512
           +  L   SNL                                      K  P   C  N+
Sbjct: 546 DRALRRMSNLRFLSVYKTRYNGNDRVHIPEEIEFPPRLRLLHWEAYPKKSLPLRFCLENL 605

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            +L ++++ +E+L      L+ L  +D ++   LK +   L N  +L+RL L+GC  L +
Sbjct: 606 VELYMRDSQLEKLWEGAQPLTNLKKMDFSSSRKLKELPD-LSNATNLKRLQLNGCTSLVE 664

Query: 573 LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
           +P  I NL  LE L +    + E +P+ +  L+ L  + +  C RL++ P++    S   
Sbjct: 665 IPSTIANLHKLEDLVMNSCVNLEVVPTHI-NLASLERIYMIGCSRLRTFPDMSTNISQLL 723

Query: 632 RHCTSLKTLSNSSTLLTRSS 651
              T+++ +  S  L +R S
Sbjct: 724 MSETAVEKVPASIRLWSRLS 743



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 96/182 (52%), Gaps = 34/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ +Y+ GCS L+ FP++S NI  L + ETA+E++P+SI   SRL  +D+ 
Sbjct: 689 VPTHINLASLERIYMIGCSRLRTFPDMSTNISQLLMSETAVEKVPASIRLWSRLSYVDIR 748

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK+                     L   PE      SL  L+L+  D EKIP  +K
Sbjct: 749 GSGNLKT---------------------LTHFPE------SLWSLDLSYTDIEKIPYCIK 781

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSN-SSTLLTRSSKHWDIFNFS 660
           ++  L  L +  C++L SLPELP  SS+        K+L N +S L T ++K     NF+
Sbjct: 782 RIHHLQSLEVTGCRKLASLPELP--SSLRLLMAEDCKSLENVTSPLRTPNAK----LNFT 835

Query: 661 NC 662
           NC
Sbjct: 836 NC 837


>gi|40846341|gb|AAR92462.1| SNC1-like protein [Arabidopsis thaliana]
          Length = 1052

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 236/713 (33%), Positives = 358/713 (50%), Gaps = 103/713 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           +ASSS S       ++DVF SFRG+DVR +F+SHL   L R K  TFIDD++ R   I P
Sbjct: 3   IASSSGS------RRYDVFPSFRGEDVRDSFLSHLLKEL-RGKAITFIDDEIERSRSIGP 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG--- 117
            L SAI+ S+I+IVIFS+ YASS WCLNELV+I +      Q+V+P+F+ VD S+     
Sbjct: 56  ELLSAIKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQT 115

Query: 118 ------------------------YCPSLGWMGIFDIPT--SESVLIEGNVNDISKKLSD 151
                                      ++  M  +D+    +E+ +IE    D+ +K   
Sbjct: 116 GEFGKVFEXTCNANLEDEKQSWKQALAAVAVMAGYDLRKWPNEAAMIEELAEDVLRK--T 173

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + PSD+   LVG+E  I+ I+S L   S E   VGIWG  GIGK+TI  A+YS +S  F 
Sbjct: 174 MTPSDDFGDLVGIEDHIEAIKSVLCLESKEARMVGIWGQSGIGKSTIGRALYSQLSIQFH 233

Query: 212 GSYFMQNIRDESEKVGG---------LANI---------HLNFERRRLSRMKVLIVFYDL 253
              F+         V G         L+ I         H     +RL   KVLI+  D+
Sbjct: 234 HRAFVTYKSTSGSDVSGMKLSWEKELLSEILSQKDIKIDHFGVVEQRLKHKKVLILLDDV 293

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            +L+ +  L+G+ + F  GSR+I+ T+D Q LK H    +  V+EVK  S   +LT+  R
Sbjct: 294 DNLEFLKTLVGKAEWFGSGSRIIVITQDRQFLKAHD---IDLVYEVKLPSQGLALTMLCR 350

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AFG++ P   F +L+  V K A  +PL L VLGS LK  S+EEW   + +L+   + DI
Sbjct: 351 SAFGKDSPPDDFRDLAAKVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDI 410

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISRLVGKSLVT 432
            K L+VSY  LD ++Q++F   AC F G +   + +FL DA   +  I +  L  KSL+ 
Sbjct: 411 MKTLRVSYVRLDPKDQDMFHYIACLFNGFEVKSIKDFLGDAV--NVNIRLKTLHDKSLIR 468

Query: 433 ISNNKIT-MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           I+ ++I  MH L++++  EI R+ES  +PG R  L + E+I  V ++ T      GI   
Sbjct: 469 ITPDEIVEMHTLVEKLATEIDREESKGNPGNRRFLKNAEEILDVFSDKTGTEKLLGIYFS 528

Query: 490 ------------SLKELYLGGCSNLK-----------------RFPE----ISCNIEDLD 516
                       S+ E    G  NL+                 R P     +   ++ L 
Sbjct: 529 ASTDPWNDKPFFSIDENSFQGMLNLQYLGIHDHSMWYPRETRLRLPNGLVYLPRKLKWLW 588

Query: 517 LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
             +  ++ LPS+      LV+L + N S L+ +     +L SL+ +NL     L+++P +
Sbjct: 589 WNDCPLKRLPSNF-KAEYLVELIMVN-SDLEKLWDGTQSLGSLKEMNLRYSTNLKEIP-D 645

Query: 577 IGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
           +    +LE L++++ +  E  P+ +   S L+ L L  C  L++ P +  G S
Sbjct: 646 LSLAINLERLDISDCEVLESFPTPLNSES-LAYLNLTGCPNLRNFPAIKMGCS 697



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 54/86 (62%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT +NL SLK L LGGCS+L+ FP IS NI  L L+ TAIEE+P  I N S L  L + 
Sbjct: 825 LPTAVNLSSLKILDLGGCSSLRTFPLISTNIVWLYLENTAIEEVPCCIENFSGLNVLLMY 884

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGC 567
            C  LK++S  +  L+SL   + + C
Sbjct: 885 CCQRLKNISPNIFRLRSLFFADFTNC 910



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 9/171 (5%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           S PT +N +SL  L L GC NL+ FP I     ++D  +     +     N   L+ LD 
Sbjct: 665 SFPTPLNSESLAYLNLTGCPNLRNFPAIKMGCSNVDFLQERKIVVKDCFWN-KNLLGLDY 723

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSS 599
            +C  L+  + R    + L+ L L G  KLEKL E + +LESL  ++L+E ++  +IP  
Sbjct: 724 LDC--LRRCNPRKFRPEHLKDLTLRGNNKLEKLWEGVQSLESLVTMDLSECENLTEIPD- 780

Query: 600 MKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTL 646
           + + + L +L+L NCK L +LP     L        + CT L+ L  +  L
Sbjct: 781 LSKATNLENLKLNNCKSLVTLPTTIGNLQKLVRFEMKECTGLEVLPTAVNL 831



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 7/137 (5%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
           +L+SL  + L  C NL   P++S   N+E+L L    ++  LP++IGNL +LV  ++  C
Sbjct: 760 SLESLVTMDLSECENLTEIPDLSKATNLENLKLNNCKSLVTLPTTIGNLQKLVRFEMKEC 819

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           +GL+ + + + NL SL+ L+L GC  L   P    N+    +L L     E++P  ++  
Sbjct: 820 TGLEVLPTAV-NLSSLKILDLGGCSSLRTFPLISTNIV---WLYLENTAIEEVPCCIENF 875

Query: 604 SKLSDLRLQNCKRLQSL 620
           S L+ L +  C+RL+++
Sbjct: 876 SGLNVLLMYCCQRLKNI 892


>gi|357515237|ref|XP_003627907.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|357515241|ref|XP_003627909.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521929|gb|AET02383.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355521931|gb|AET02385.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1110

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 232/727 (31%), Positives = 342/727 (47%), Gaps = 127/727 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF+SFRG+D R  F   L   L  +   TFID   + G   + +L  AIE S+I IV+
Sbjct: 11  YDVFISFRGEDTRLGFTGFLYKTLSEKGFHTFIDHHADAGRGTTKTLVDAIEESRIGIVV 70

Query: 76  FSEGYASSRWCLNELVKILES---KNKYGQIVVPVFYLVDPSDAGYCPSL---------- 122
           FSE YASS WCL+EL  I++S   K  + + V PVFY VDPS   +   +          
Sbjct: 71  FSENYASSTWCLDELAYIIDSFSNKKNFRRSVFPVFYNVDPSHVRHQSGIYGQALDSHQK 130

Query: 123 ----------GWMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                      W        +            E  LI+  V+ +S K+         D 
Sbjct: 131 NNNFNSEKLNKWKNALKQAANLSGFHFKHGDGYEYELIDKIVDLVSTKIDSTPYLRVVDH 190

Query: 161 LVGVESIIKEIESQL---------LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            +G+   + E+   L           GS     +GI+G+GGIGKTT+A A+++ IS  F+
Sbjct: 191 PIGLNYRVLELNWLLNHNTHAATATVGSHGLKLLGIYGMGGIGKTTLARAVFNFISPQFD 250

Query: 212 GSYFMQNIRDESEKVG----------------------GLANIH--LNFERRRLSRMKVL 247
              F++++R+ S   G                       LA+I   L   +  L R KVL
Sbjct: 251 AFCFLEDVRENSANHGLVHLQQTLLATLAGQKKKKKDFQLASISEGLLLLKNMLHRKKVL 310

Query: 248 IVFYDLTDLKQIDLLIGR-LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           +V  D+    Q+   +GR LD F  G+ +IITTRD   L  H    V   ++V+EL+ ++
Sbjct: 311 LVLDDVNSSDQLQATLGRGLDTFGYGTTIIITTRDKHFLTTHG---VHTTYKVEELTKDE 367

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           SL L S NAF  N     +++L N V   A+G+PLAL+V+GSYL G   +EWESA++  +
Sbjct: 368 SLELLSWNAFKTNKIYPDYIDLLNRVTTCASGLPLALEVIGSYLHGKGVKEWESALDSYE 427

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGI 422
           ++P  DIQ +LK +Y+ LD + + +FLD ACFFKG +    +YL+      C    +   
Sbjct: 428 KIPSKDIQTILKQTYNALDGDLRQLFLDIACFFKGYELSEVEYLLSAHHGYCFKPHRFRF 487

Query: 423 SRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
             L+  SL+ I  +N + MHDL+++M  EIVRQES   PGKRSRLW   DI +VL +NT 
Sbjct: 488 --LLETSLIKIDEHNHVKMHDLIRDMAREIVRQESPDHPGKRSRLWLTTDIVEVLEKNTG 545

Query: 482 ----------LP----------------TGINLDSLKEL-YLGGCSNLKR---------F 505
                      P                TG+    ++ L +  G  NL           +
Sbjct: 546 TSEIQTIVLDFPRYEKMVRWDGKAFQKMTGLQTLIIRSLCFAEGPKNLPNSLRVLEWWGY 605

Query: 506 PEISCNIEDLDLKETAIEELPSS------IGNLSRLVDLDLTNCSGLKSVS--SRLCNLK 557
           P  S        K+ A+ +LP S      +    + V++ L N    K ++    +    
Sbjct: 606 PSQSLP-SYFYPKKLAVLKLPHSSFMSLELSKSKKFVNMTLLNFDECKIITHIPDVSGAP 664

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKR 616
           +L RL+L  C  L ++ + +G L+ LE LNL        +P     L+ L  L L +C  
Sbjct: 665 NLERLSLDSCENLVEIHDSVGFLDKLEILNLGSCAKLRNLPPI--HLTSLQHLNLSHCSS 722

Query: 617 LQSLPEL 623
           L S PE+
Sbjct: 723 LVSFPEI 729



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 37/187 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           I+L SL+ L L  CS+L  FPEI     NI  L L+ TAI E P SIGNL RL  L+L  
Sbjct: 707 IHLTSLQHLNLSHCSSLVSFPEILGNMKNITSLSLEYTAIREFPYSIGNLPRLKSLELHG 766

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIG-----NLESLEY------- 585
           C G   + S +  L  L  L++  C      K +K PE++G     N++ +E+       
Sbjct: 767 C-GNLLLPSSIILLSELEELSIWQCEGLKSYKQDKGPEKVGSTVSSNVKYIEFFSCNISD 825

Query: 586 ---------------LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH 630
                          LNL+   F  +P+ +K+   L+ L L  C++L+ +  +P    I 
Sbjct: 826 DFIRIGLSWFSNVVELNLSANTFTVLPTCIKECRFLTILILDYCRQLREIRGIPPNLEIF 885

Query: 631 -ARHCTS 636
            A  CTS
Sbjct: 886 SAIRCTS 892



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 499 CSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
           C  +   P++S   N+E L L     + E+  S+G L +L  L+L +C+ L+++     +
Sbjct: 651 CKIITHIPDVSGAPNLERLSLDSCENLVEIHDSVGFLDKLEILNLGSCAKLRNLPP--IH 708

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
           L SL+ LNLS C  L   PE +GN++++  L+L      + P S+  L +L  L L  C
Sbjct: 709 LTSLQHLNLSHCSSLVSFPEILGNMKNITSLSLEYTAIREFPYSIGNLPRLKSLELHGC 767


>gi|6967115|emb|CAB72469.1| disease resistance protein homlog [Arabidopsis thaliana]
          Length = 1199

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 231/719 (32%), Positives = 345/719 (47%), Gaps = 96/719 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KH VF SF G DVR   +SH+  +  R+ I+ FID+ + R   I   L  AI+GSKI+IV
Sbjct: 93  KHHVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIV 152

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           + S+ YASS WCL+EL +I++ +   GQIV+ +FY VDP+D               C   
Sbjct: 153 LLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGK 212

Query: 123 G------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 213 TKEYVERWRKALEDVATIAGEHSRNWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMR 272

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  +++ +S  F+ S  + NIR     
Sbjct: 273 AHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPR 332

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 333 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 392

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++VK  S +++  +F  NAFGQ  P  
Sbjct: 393 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVKYPSNDEAFQIFCMNAFGQKQPHE 449

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V+  A  +PL L+VLGS L+G S+ EWE  + +LK     +I  +++ SYDG
Sbjct: 450 GFDEIAWEVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDG 509

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-----KI 438
           L DE++ + L  AC F       V   L       K G+  L  KSL++I  N      I
Sbjct: 510 LCDEDKYLLLYIACLFNYESTTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSLYGDTI 569

Query: 439 TMHDLLQEMGGEIVRQESIKDP-GKRSRLWHPEDIYQVLNENT---SLPTGINLDSL-KE 493
            MH LL++ G E  R++ +     KR  L    DI +VL+++T       GI  D    +
Sbjct: 570 NMHTLLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGITFDLFGTQ 629

Query: 494 LYLG----GCSNLKRFPEISCN-----------IEDLDLKETAIEE----------LPSS 528
            YL         +  F  +  N           ++DL      I            LPS+
Sbjct: 630 DYLNISEKALERMNDFEFVRINALIPTERLQLALQDLICHSPKIRSLKWYSYQNICLPST 689

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
             N   LV+L ++  S L+ +      L++L+ ++LS    L++LP  +    +LE L L
Sbjct: 690 F-NPEFLVELHMS-FSKLRKLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKL 746

Query: 589 AE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS---SIHARHCTSLKTLSNS 643
            +     ++PSS+++L+ L  L LQ C  L  LP     +    ++  +C+SL+ L  S
Sbjct: 747 RDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEELYLENCSSLEKLPPS 805



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 101/195 (51%), Gaps = 37/195 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKETA-IEELPSSIGNLSRLVDL 538
           LP+  N   L+ELYL  CS+L++ P    + N++ L L   + + ELP+ I N + L  L
Sbjct: 779 LPSFGNATKLEELYLENCSSLEKLPPSINANNLQQLSLINCSRVVELPA-IENATNLQKL 837

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG-------------------- 578
           DL NCS L  +   +    +L+ LN+SGC  L KLP  IG                    
Sbjct: 838 DLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELP 897

Query: 579 ---NLESLEYLNLAE----KDFEKIPSSM-----KQLSKLSDLRLQNCKRLQSLPELPCG 626
              NL+ L+ LNLA     K F +I + +     +++S+L DLR+ NC  L SLP+LP  
Sbjct: 898 ININLKFLDTLNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDS 957

Query: 627 -SSIHARHCTSLKTL 640
            + ++A +C SL+ L
Sbjct: 958 LAYLYADNCKSLERL 972



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 39/233 (16%)

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---D 516
           P  RS  W+    YQ    N  LP+  N + L EL++   S L++  E +  + +L   D
Sbjct: 671 PKIRSLKWYS---YQ----NICLPSTFNPEFLVELHMSF-SKLRKLWEGTKQLRNLKWMD 722

Query: 517 LKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           L  +  ++ELP+ +   + L +L L +CS L  + S +  L SL+RL L  C  L +LP 
Sbjct: 723 LSNSEDLKELPN-LSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELP- 780

Query: 576 EIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR-- 632
             GN   LE L L      EK+P S+   + L  L L NC R+  LP +   +++     
Sbjct: 781 SFGNATKLEELYLENCSSLEKLPPSINA-NNLQQLSLINCSRVVELPAIENATNLQKLDL 839

Query: 633 -HCTSLKTL---------------SNSSTLLTRSSKHWDI-----FNFSNCSN 664
            +C+SL  L               S  S+L+   S   DI     F+ SNCSN
Sbjct: 840 GNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSN 892


>gi|255558310|ref|XP_002520182.1| leucine-rich repeat containing protein, putative [Ricinus communis]
 gi|223540674|gb|EEF42237.1| leucine-rich repeat containing protein, putative [Ricinus communis]
          Length = 1349

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 235/725 (32%), Positives = 353/725 (48%), Gaps = 100/725 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           + DVFLSFRG+D RH F  +L   L +  + TF DD+ L RG+EI+PSL  AIE S  +I
Sbjct: 18  RWDVFLSFRGEDTRHTFTENLYRELIKHGVRTFRDDEELQRGDEIAPSLLDAIEDSAAAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
            + S+ YA SRWCL EL +I+E +     +++PVF+ VDPSD                  
Sbjct: 78  AVISKRYADSRWCLEELARIIECRR---LLLLPVFHQVDPSDVRKQTGPFERDFKRLEER 134

Query: 117 -----------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                          + G  G       +  LIE  V +I  KLS+  P       VG++
Sbjct: 135 FGVEKVGRWRNAMNKAGGISGWDSKLWEDEKLIESLVKNILTKLSNT-PLGIPKHPVGLD 193

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           S ++E+ + L         +GI+G+GG GK+T+A A+++ +  HFE   F+ NIR+ S +
Sbjct: 194 SRLQELMNMLDIKGNGVKVMGIYGMGGAGKSTLAKALFNKLVMHFERRSFISNIRETSNQ 253

Query: 226 VGGL----------------ANIHLNFERRRLSRMK-VLIVFYDLTDLKQIDLLIGRLDG 268
             GL                AN+ L   R  L   K VLIV  D+ D  Q+ LL G+   
Sbjct: 254 KDGLDALQKRLIRDLSPDSAANVSL---REVLQTQKPVLIVLDDIDDTIQLHLLAGKRRW 310

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
              GSR+IITTRD+Q +   R   V  V+E++ L + +++ LFS +AFG+  P   F ++
Sbjct: 311 IYEGSRIIITTRDIQTI---RAGIVDVVYEMRGLDFPEAVQLFSYHAFGREKPLPEFADI 367

Query: 329 SNIVIKYANGVPLALQVLGSYL-KGMSEEEWESAVNKLKRMPHMD--IQKVLKVSYDGLD 385
           S  ++     +PLAL+V GS L    ++  W  A  KL++ P     +Q+VL++S++GLD
Sbjct: 368 SQKIVSRTGNLPLALEVFGSSLFDKRTKNLWVEAFEKLEQNPPGPGRLQEVLEISFNGLD 427

Query: 386 DEEQNIFLDTACFF--KGNDQYLVMNFLDACRFSAKIGISRLVGKSLV-TISNNKITMHD 442
           D+++  FLD ACFF  +  ++  ++  L    F+A+  I  L  KSL+  I N+ + +HD
Sbjct: 428 DQQKCAFLDIACFFIKQTMEKEEIVYVLKGYGFAAETLIRDLAAKSLIKIIENDFLWIHD 487

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLDSLKELYLGGCS 500
            L++MG  IV++ES  DPG RSRLW   DI  VL   + T    GI LD     Y     
Sbjct: 488 QLRDMGRRIVQRES-PDPGNRSRLWDFNDILSVLKNEKGTRNIQGIALDIETNRYEASTG 546

Query: 501 -----NLKRFPEISCNIEDLDLKETAIEELPSSIGNL-------SRLVDL------DLTN 542
                N +R P  +  I  + LKE       +   N+        ++V+L      D+  
Sbjct: 547 DIYWMNFRRRPTFNSAI--MYLKEIYKNRFHNGAANIILKTESFKQMVNLRYLQINDVVL 604

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
               K + +       ++ L   GC  LE LP E   ++ L  L+L+     K+      
Sbjct: 605 NGNFKQMPA------EVKFLQWRGC-SLENLPSEFC-MQHLAVLDLSHSKIRKLWKQSWC 656

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
             +L  L LQNC  L +LP+L   S++      +C +L  +  S   L +        N 
Sbjct: 657 TERLLLLNLQNCYHLTALPDLSVHSALEKLILENCKALVQIHKSVGDLKKLIH----LNL 712

Query: 660 SNCSN 664
             CSN
Sbjct: 713 KGCSN 717



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 90/192 (46%), Gaps = 40/192 (20%)

Query: 487 NLDSLKELYLGGCSNLKRFPE-------------ISC--------------NIEDLDLKE 519
           +L  L  L L GCSNL  FP                C              N+ +L L E
Sbjct: 703 DLKKLIHLNLKGCSNLTEFPSDVSGLKLLEILDLTGCPKIKQLPDDMRSMKNLRELLLDE 762

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           TAI +LP SI +L  L  L L  C  L+ VS  +  L SL+ L+L     LE++P+ IG+
Sbjct: 763 TAIVKLPDSIFHLKELRKLSLKGCWLLRHVSVHIGKLTSLQELSLDSS-GLEEIPDSIGS 821

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC--GSSIHAR---- 632
           L +LE LNLA  K    IP S+  L  L DLRL +     S+ ELP   GS  H +    
Sbjct: 822 LSNLEILNLARCKSLIAIPDSISNLESLIDLRLGS----SSIEELPASIGSLCHLKSLSV 877

Query: 633 -HCTSLKTLSNS 643
            HC SL  L +S
Sbjct: 878 SHCQSLSKLPDS 889



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 20/198 (10%)

Query: 469  PEDIYQVLNENT---------SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD-- 516
            PE I ++LN  T          LP  I  L+SL  L L  C  L+R P    N++ L   
Sbjct: 934  PESIGKMLNLTTLILDYSMISELPESIEMLESLSTLMLNKCKQLQRLPASIGNLKRLQHL 993

Query: 517  -LKETAIEELPSSIGNLSRLVDLDL--TNCSGLKSVSS----RLCNLKSLRRLNLSGCLK 569
             ++ET++ ELP  +G LS L+   +   +   L+  +S     L NL  L  L+  G   
Sbjct: 994  YMEETSVSELPDEMGMLSNLMIWKMRKPHTRQLQDTASVLPKSLSNLSLLEHLDACGWAF 1053

Query: 570  LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SS 628
               +P+E   L SL+ LN +      +PS ++ LS L +L L +CK+L+SLP LP    +
Sbjct: 1054 FGAVPDEFDKLSSLQTLNFSHNSICCLPSRLRGLSILKNLILADCKQLKSLPLLPSSLVN 1113

Query: 629  IHARHCTSLKTLSNSSTL 646
            +   +C +L+++ + + L
Sbjct: 1114 LIVANCNALESVCDLANL 1131



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 27/167 (16%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           +P  I +L +L+ L L  C +L   P+   N+E   DL L  ++IEELP+SIG+L  L  
Sbjct: 815 IPDSIGSLSNLEILNLARCKSLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKS 874

Query: 538 LDLTNCSGLKSVSSRLCNLKSL-----------------------RRLNLSGCLKLEKLP 574
           L +++C  L  +   +  L SL                       R+L++  C+ L  LP
Sbjct: 875 LSVSHCQSLSKLPDSIGGLASLVELWLEGTSVTEIPDQVGTLSMLRKLHIGNCMDLRFLP 934

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           E IG + +L  L L      ++P S++ L  LS L L  CK+LQ LP
Sbjct: 935 ESIGKMLNLTTLILDYSMISELPESIEMLESLSTLMLNKCKQLQRLP 981



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 16/180 (8%)

Query: 494 LYLGGCSNLKRFPEISCN--IEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L L  C +L   P++S +  +E L L+   A+ ++  S+G+L +L+ L+L  CS L    
Sbjct: 663 LNLQNCYHLTALPDLSVHSALEKLILENCKALVQIHKSVGDLKKLIHLNLKGCSNLTEFP 722

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
           S +  LK L  L+L+GC K+++LP+++ ++++L  L L E    K+P S+  L +L  L 
Sbjct: 723 SDVSGLKLLEILDLTGCPKIKQLPDDMRSMKNLRELLLDETAIVKLPDSIFHLKELRKLS 782

Query: 611 LQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR------SSKHWDIFNFSNCSN 664
           L+ C  L+ +       S+H    TSL+ LS  S+ L        S  + +I N + C +
Sbjct: 783 LKGCWLLRHV-------SVHIGKLTSLQELSLDSSGLEEIPDSIGSLSNLEILNLARCKS 835



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 27/170 (15%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRL 535
           T  P+ ++ L  L+ L L GC  +K+ P+      N+ +L L ETAI +LP SI +L  L
Sbjct: 719 TEFPSDVSGLKLLEILDLTGCPKIKQLPDDMRSMKNLRELLLDETAIVKLPDSIFHLKEL 778

Query: 536 VDLDLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
             L L  C                       SGL+ +   + +L +L  LNL+ C  L  
Sbjct: 779 RKLSLKGCWLLRHVSVHIGKLTSLQELSLDSSGLEEIPDSIGSLSNLEILNLARCKSLIA 838

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +P+ I NLESL  L L     E++P+S+  L  L  L + +C+ L  LP+
Sbjct: 839 IPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKSLSVSHCQSLSKLPD 888



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 33/173 (19%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNI------EDLDLKETAIEELPSSIGNL 532
             LP  I +L  L++L L GC  L+    +S +I      ++L L  + +EE+P SIG+L
Sbjct: 766 VKLPDSIFHLKELRKLSLKGCWLLR---HVSVHIGKLTSLQELSLDSSGLEEIPDSIGSL 822

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSL-----------------------RRLNLSGCLK 569
           S L  L+L  C  L ++   + NL+SL                       + L++S C  
Sbjct: 823 SNLEILNLARCKSLIAIPDSISNLESLIDLRLGSSSIEELPASIGSLCHLKSLSVSHCQS 882

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           L KLP+ IG L SL  L L      +IP  +  LS L  L + NC  L+ LPE
Sbjct: 883 LSKLPDSIGGLASLVELWLEGTSVTEIPDQVGTLSMLRKLHIGNCMDLRFLPE 935



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 477  NENTSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
            N    LP+ +  L  LK L L  C  LK  P +  ++ +L +      E    + NL  L
Sbjct: 1075 NSICCLPSRLRGLSILKNLILADCKQLKSLPLLPSSLVNLIVANCNALESVCDLANLQSL 1134

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
             DLDLTNC+ +  +    C LKSLRRL ++GC 
Sbjct: 1135 QDLDLTNCNKIMDIPGLEC-LKSLRRLYMTGCF 1166


>gi|145332743|ref|NP_001078237.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|145339123|ref|NP_190053.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644407|gb|AEE77928.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644408|gb|AEE77929.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1219

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 231/719 (32%), Positives = 345/719 (47%), Gaps = 96/719 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KH VF SF G DVR   +SH+  +  R+ I+ FID+ + R   I   L  AI+GSKI+IV
Sbjct: 93  KHHVFPSFHGADVRKTILSHILESFRRKGIDPFIDNNIERSKSIGHELKEAIKGSKIAIV 152

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSL 122
           + S+ YASS WCL+EL +I++ +   GQIV+ +FY VDP+D               C   
Sbjct: 153 LLSKNYASSSWCLDELAEIMKCRELLGQIVMTIFYEVDPTDIKKQTGEFGKAFTKTCKGK 212

Query: 123 G------WM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+ T          +E+ +IE    D+S  L+   PS + D LVG+ 
Sbjct: 213 TKEYVERWRKALEDVATIAGEHSRNWRNEADMIEKIATDVSNMLNSFTPSRDFDGLVGMR 272

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR----- 220
           + +  +E  L     E   +GIWG  GIGKTTIA  +++ +S  F+ S  + NIR     
Sbjct: 273 AHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRFQLSAIIVNIRGIYPR 332

Query: 221 ---DESEKVGGLANI--------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE      L N               HL   + RL   KV +V  ++  L Q+D L 
Sbjct: 333 PCFDEYSAQLQLQNQMLSQMINHKDIMISHLGVAQERLRDKKVFLVLDEVDQLGQLDALA 392

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITT D+ +LK H    + HV++VK  S +++  +F  NAFGQ  P  
Sbjct: 393 KETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVKYPSNDEAFQIFCMNAFGQKQPHE 449

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF E++  V+  A  +PL L+VLGS L+G S+ EWE  + +LK     +I  +++ SYDG
Sbjct: 450 GFDEIAWEVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGNIGSIIQFSYDG 509

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-----KI 438
           L DE++ + L  AC F       V   L       K G+  L  KSL++I  N      I
Sbjct: 510 LCDEDKYLLLYIACLFNYESTTKVEEVLANKFLDVKQGLHVLAQKSLISIDENSLYGDTI 569

Query: 439 TMHDLLQEMGGEIVRQESIKDP-GKRSRLWHPEDIYQVLNENT---SLPTGINLDSL-KE 493
            MH LL++ G E  R++ +     KR  L    DI +VL+++T       GI  D    +
Sbjct: 570 NMHTLLRQFGRETSRKQFVYHGFTKRQLLVGERDICEVLSDDTIDSRRFIGITFDLFGTQ 629

Query: 494 LYLG----GCSNLKRFPEISCN-----------IEDLDLKETAIEE----------LPSS 528
            YL         +  F  +  N           ++DL      I            LPS+
Sbjct: 630 DYLNISEKALERMNDFEFVRINALIPTERLQLALQDLICHSPKIRSLKWYSYQNICLPST 689

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
             N   LV+L ++  S L+ +      L++L+ ++LS    L++LP  +    +LE L L
Sbjct: 690 F-NPEFLVELHMS-FSKLRKLWEGTKQLRNLKWMDLSNSEDLKELP-NLSTATNLEELKL 746

Query: 589 AE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS---SIHARHCTSLKTLSNS 643
            +     ++PSS+++L+ L  L LQ C  L  LP     +    ++  +C+SL+ L  S
Sbjct: 747 RDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELPSFGNATKLEELYLENCSSLEKLPPS 805



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 101/195 (51%), Gaps = 37/195 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKETA-IEELPSSIGNLSRLVDL 538
           LP+  N   L+ELYL  CS+L++ P    + N++ L L   + + ELP+ I N + L  L
Sbjct: 779 LPSFGNATKLEELYLENCSSLEKLPPSINANNLQQLSLINCSRVVELPA-IENATNLQKL 837

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG-------------------- 578
           DL NCS L  +   +    +L+ LN+SGC  L KLP  IG                    
Sbjct: 838 DLGNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSNLVELP 897

Query: 579 ---NLESLEYLNLAE----KDFEKIPSSM-----KQLSKLSDLRLQNCKRLQSLPELPCG 626
              NL+ L+ LNLA     K F +I + +     +++S+L DLR+ NC  L SLP+LP  
Sbjct: 898 ININLKFLDTLNLAGCSQLKSFPEISTKIFTDCYQRMSRLRDLRINNCNNLVSLPQLPDS 957

Query: 627 -SSIHARHCTSLKTL 640
            + ++A +C SL+ L
Sbjct: 958 LAYLYADNCKSLERL 972



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 39/233 (16%)

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---D 516
           P  RS  W+    YQ    N  LP+  N + L EL++   S L++  E +  + +L   D
Sbjct: 671 PKIRSLKWYS---YQ----NICLPSTFNPEFLVELHMSF-SKLRKLWEGTKQLRNLKWMD 722

Query: 517 LKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           L  +  ++ELP+ +   + L +L L +CS L  + S +  L SL+RL L  C  L +LP 
Sbjct: 723 LSNSEDLKELPN-LSTATNLEELKLRDCSSLVELPSSIEKLTSLQRLYLQRCSSLVELP- 780

Query: 576 EIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR-- 632
             GN   LE L L      EK+P S+   + L  L L NC R+  LP +   +++     
Sbjct: 781 SFGNATKLEELYLENCSSLEKLPPSINA-NNLQQLSLINCSRVVELPAIENATNLQKLDL 839

Query: 633 -HCTSLKTL---------------SNSSTLLTRSSKHWDI-----FNFSNCSN 664
            +C+SL  L               S  S+L+   S   DI     F+ SNCSN
Sbjct: 840 GNCSSLIELPLSIGTATNLKELNISGCSSLVKLPSSIGDITNLKEFDLSNCSN 892


>gi|15235928|ref|NP_193425.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302805|emb|CAB46046.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268443|emb|CAB80963.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658423|gb|AEE83823.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1304

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 247/701 (35%), Positives = 356/701 (50%), Gaps = 83/701 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA++SSS         D+F SF G+DVR NF+SHL   L R  I TF+D  + R   I+ 
Sbjct: 1   MAAASSS-------GSDIFPSFSGEDVRKNFLSHLLKQLNRRSINTFMDHVIERSCIIAD 53

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------ 114
           +L SAI  ++ISIVIFS+ YA+S WCLNELV+I      +GQ V+PVFY VDPS      
Sbjct: 54  ALISAIREARISIVIFSKNYAASTWCLNELVEIDNCSKYFGQKVIPVFYDVDPSHVRKQI 113

Query: 115 ------------DAGYCPSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSD 151
                       D        W+  + DI            +++ ++E   ND+S KL  
Sbjct: 114 GEFGKVFKKTCEDKPADQKQRWVKALTDISNIAGEDLRNGPNDAHMVEKIANDVSNKL-- 171

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHF 210
             P      LVG+E  I+ I+S L   S E    VGIWG  GIGK+TI  A++S +SS F
Sbjct: 172 FHPPKGFGDLVGIEDHIEAIKSILCLESKEAKIMVGIWGQSGIGKSTIGRALFSQLSSQF 231

Query: 211 EGSYFMQNIRDESEKVGG---------LANI---------HLNFERRRLSRMKVLIVFYD 252
               F+         V G         L+ I         H     +RL   KVLI+  D
Sbjct: 232 PLRAFVTYKSTSGSDVSGMKLSWQKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDD 291

Query: 253 LTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           + +L+ +  L+G+ + F  GSR+I+ T+D QLLK H    +  V+EVK  S   +L + S
Sbjct: 292 VDNLEFLKTLVGKAEWFGSGSRIIVITQDRQLLKAHE---IDLVYEVKLPSQGLALQMIS 348

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
           + AFG++ P   F  L+  V + A  +PL L VLGS LKG  ++EW   + +L+      
Sbjct: 349 QYAFGKDSPPDDFKALAFEVAELAGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDK 408

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           I++ L+V YD L+ + + +F   ACFF G     V   L+       +G++ LV KSL+ 
Sbjct: 409 IEETLRVCYDRLNKKNRELFKCIACFFNGFKVSNVKELLE-----DDVGLTMLVEKSLIR 463

Query: 433 IS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSL 491
           I+ +  I MH+LL+++G EI R +S  +PGKR  L + EDI +VL E T     + +   
Sbjct: 464 ITPDGDIEMHNLLEKLGREIDRAKSKGNPGKRQFLTNFEDIQEVLAEKTGTEILLGIRLP 523

Query: 492 KELYLGGCSNL---KRFPEISCNIEDLDLKETAIEELPSSIGNLS-RLVDLDLTNCSGLK 547
              YL   S L   K F  +  N++ L++   +  +LP S+  L  +L  L+   C  LK
Sbjct: 524 HPGYLTTRSFLIDEKLFKGMR-NLQYLEIGYWSDGDLPQSLVYLPLKLRLLEWVYCP-LK 581

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKL 606
           S+ S     + L +L +    KLEKL E    L SL+ +NL   K F++IP  +     L
Sbjct: 582 SLPSTF-RAEYLVKLIMKNS-KLEKLWEGTLPLGSLKKMNLWYSKYFKEIP-DLSLAINL 638

Query: 607 SDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
            +L L  C+ L +LP     SSI  ++   L+TL  S  LL
Sbjct: 639 EELNLSECESLVTLP-----SSI--QNAIKLRTLYCSGVLL 672



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 27/162 (16%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE----------------- 524
            LPT +NL SL+ L L GCS+L+ FP IS +I+ L L+ TAIEE                 
Sbjct: 973  LPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEILDLSKATKLESLILNN 1032

Query: 525  ------LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
                  LPS+IGNL  L  L +  C+GL+ + + + NL SL  L+LSGC  L   P    
Sbjct: 1033 CKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLSSLGILDLSGCSSLRTFPLIST 1091

Query: 579  NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
            N   + +L L      ++P  ++  ++L  L +  C+RL+++
Sbjct: 1092 N---IVWLYLENTAIGEVPCCIEDFTRLRVLLMYCCQRLKNI 1130



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 52/86 (60%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS NI  L L+ TAI E+P  I + +RL  L + 
Sbjct: 1063 LPTDVNLSSLGILDLSGCSSLRTFPLISTNIVWLYLENTAIGEVPCCIEDFTRLRVLLMY 1122

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L+SL   + + C
Sbjct: 1123 CCQRLKNISPNIFRLRSLMFADFTDC 1148



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 19/192 (9%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
           S PT +NL+SL+ L L GC NL+ FP I     D+D  E   E  +     N +    LD
Sbjct: 812 SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLD 871

Query: 540 LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             +C     +    C  +   L  LN+  C K EKL E I +L SLE ++L+E ++  +I
Sbjct: 872 YLDC----LMRCMPCEFRPEYLVFLNVR-CYKHEKLWEGIQSLGSLEEMDLSESENLTEI 926

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
           P  + + + L  L L NCK L +LP     L     +  + CT L+ L     L      
Sbjct: 927 P-DLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNL-----S 980

Query: 653 HWDIFNFSNCSN 664
             +  + S CS+
Sbjct: 981 SLETLDLSGCSS 992



 Score = 45.8 bits (107), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 22/102 (21%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L  LK+++L G   LK  P++S  I                      L ++D+  C  L 
Sbjct: 749 LGRLKQMFLRGSKYLKEIPDLSLAI---------------------NLEEVDICKCESLV 787

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           +  S + N   L  L++S C KLE  P ++ NLESLEYLNL 
Sbjct: 788 TFPSSMQNAIKLIYLDISDCKKLESFPTDL-NLESLEYLNLT 828



 Score = 38.9 bits (89), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 39/193 (20%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVD 537
           +LP G    SLK++ L      K  P++S   N+E+L+L E  ++  LPSSI N  +L  
Sbjct: 609 TLPLG----SLKKMNLWYSKYFKEIPDLSLAINLEELNLSECESLVTLPSSIQNAIKLRT 664

Query: 538 LDLTNCSG-----LKSVSSRLCNLKSLR-------------------RLNLSGCLKLEKL 573
           L    CSG     LKS+   +CNL+ L                    RL L     L++L
Sbjct: 665 L---YCSGVLLIDLKSLEG-MCNLEYLSVDCSRMEGTQGIVYFPSKLRLLLWNNCPLKRL 720

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG---SSIH 630
                 +E L  L +   D EK+    + L +L  + L+  K L+ +P+L        + 
Sbjct: 721 HSNF-KVEYLVKLRMENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVD 779

Query: 631 ARHCTSLKTLSNS 643
              C SL T  +S
Sbjct: 780 ICKCESLVTFPSS 792


>gi|15230846|ref|NP_189178.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
           thaliana]
 gi|332643497|gb|AEE77018.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
           thaliana]
          Length = 1981

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 231/719 (32%), Positives = 349/719 (48%), Gaps = 106/719 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KH VF SF G DVR  F+SH+  A   + I+ FID+ + R   I P L  AI GS+I+IV
Sbjct: 52  KHQVFPSFHGADVRKTFLSHVLEAFRGKGIDPFIDNSIERSKSIGPELVEAIRGSRIAIV 111

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSE 134
           + S  YASS WC+NELV+I++ K   GQIV+ +FY VDP+        G  G     T +
Sbjct: 112 LLSRNYASSSWCMNELVEIMKCKEDLGQIVITIFYEVDPTHIK--KQTGDFGKVFKETCK 169

Query: 135 SVLIEGNVNDISKKLSDL-----FPSDNKD--QLVGVESIIKEIESQLLSGSTEFNTVGI 187
               E  +    K L  +     + S N D   L+G+ + ++ + + L     +   +GI
Sbjct: 170 GKTKE-EIKRWRKALEGVATIAGYHSSNWDFEALIGMGAHMENMRALLRLDLDDVRMIGI 228

Query: 188 WGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD----------------ESEKVGGLAN 231
           WG  GIGKTTIA  + S +S  F+ S  M NI++                +++ +  + N
Sbjct: 229 WGPPGIGKTTIARFLLSQVSKSFQLSTIMVNIKECYPSPCLDEYSVQLQLQNKMLSKMIN 288

Query: 232 ------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLL 285
                  HL   + RL   KV +V  D+  L Q+D L      F PGSR+IITT +++LL
Sbjct: 289 QKDIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLDALAKETRWFGPGSRIIITTENLRLL 348

Query: 286 KNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQV 345
             HR   + H+++V+  S +++  +F  +AFGQ HP  GF ELS  V + A G+PL L+V
Sbjct: 349 MAHR---INHIYKVEFSSTDEAFQIFCMHAFGQKHPYNGFYELSREVTELAGGLPLGLKV 405

Query: 346 LGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF-----K 400
           +GS L+GMS++EW+  + +L+      I+ +L  SY+ L  E++++FL  ACFF     K
Sbjct: 406 MGSSLRGMSKQEWKRTLPRLRTCLDGKIESILMFSYEALSHEDKDLFLCIACFFNYQKIK 465

Query: 401 GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDP 460
             +++L   FLD      + G+  L  KSL+ I      MH LL ++G EI   +S  DP
Sbjct: 466 KVEKHLADRFLD-----VRQGLYVLAEKSLIHIGTGATEMHTLLVQLGREIAHTQSTNDP 520

Query: 461 GKRSRLWHPEDIYQVLNENTSLPT----GINLD---------SLKELYLGGCSNLK--RF 505
            K   L    +I + L++ T   +    G++ D         ++ E  L   SNL+  RF
Sbjct: 521 RKSLFLVDEREICEALSDETMDSSRRIIGMDFDLSKNGEEVTNISEKGLQRMSNLQFIRF 580

Query: 506 PEISC------------------------NIEDLDLKETAIEE----------LPSSIGN 531
              SC                         ++DL+ +   I            LPS+  N
Sbjct: 581 DGRSCARHSSNLTVVRSSDNNCAHPDTVNALQDLNYQFQEIRLLHWINFRRLCLPSTF-N 639

Query: 532 LSRLVDLDL--TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
              LV+L++  + C  L   S  L NLK    ++LS  + L++LP ++    +LE L L 
Sbjct: 640 PEFLVELNMPSSTCHTLWEGSKALRNLK---WMDLSYSISLKELP-DLSTATNLEELILK 695

Query: 590 E-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTLSNS 643
                 K+PS + +L KL  L L  C  +  LP          S+    C+SL  L +S
Sbjct: 696 YCVSLVKVPSCVGKLGKLQVLCLHGCTSILELPSFTKNVTGLQSLDLNECSSLVELPSS 754



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 223/691 (32%), Positives = 342/691 (49%), Gaps = 120/691 (17%)

Query: 41   REKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY 100
            R+ I  F D+++ RG  ISP L  AI GS+I++++ S  YASS WCL+EL +I++ + ++
Sbjct: 1275 RKGITPFNDNEIKRGESISPELVLAIRGSRIALILLSRNYASSSWCLDELAEIIKCREEF 1334

Query: 101  GQIVVPVFYLVDPSD----------------AGYC--PSLGWM-GIFDIPT--------- 132
            GQ V+ VFY VDPSD                AG     +  W+  +  + T         
Sbjct: 1335 GQTVMVVFYKVDPSDIKKLTGDFGSVFRKTCAGKTNEDTRRWIQALAKVATLAGYVSNNW 1394

Query: 133  -SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIG 191
             +E+V+IE    DIS KL+   PS + D+LVG+ + ++ +E  L   S E   +GIWG  
Sbjct: 1395 DNEAVMIEKIATDISNKLNKSTPSRDFDELVGMGAHMERMELLLCLDSDEVRMIGIWGPS 1454

Query: 192  GIGKTTIASAIYSNISSHFEGSYFMQNIRD------------------ESEKVGGLAN-- 231
            GIGKTTIA  ++S  S  FE S FM+NI++                  +++ +  + N  
Sbjct: 1455 GIGKTTIARFLFSQFSDSFELSAFMENIKELMYRKPVCSDDYSAKLHLQNQFMSQIINHM 1514

Query: 232  ----IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKN 287
                 HL     RL+  KVLIV  ++    Q+D +      F  GSR+IITT+D +LLK 
Sbjct: 1515 DVEVPHLGVVENRLNDKKVLIVLDNIDQSMQLDAIAKETRWFGHGSRIIITTQDQKLLKA 1574

Query: 288  HRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLG 347
            H    + H+++V   S +++  +F  +A G+  P   F EL+  V      +PL L+V+G
Sbjct: 1575 HG---INHIYKVDYPSTHEACQIFCMSAVGKKFPKDEFQELALEVTNLLGNLPLGLRVMG 1631

Query: 348  SYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGN----- 402
            S+ +GMS++EW +A+ +L+     +IQ +LK SYD L  E++++FL  AC F        
Sbjct: 1632 SHFRGMSKQEWINALPRLRTHLDSNIQSILKFSYDALCREDKDLFLHIACTFNNKRIENV 1691

Query: 403  DQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIV--RQESIKDP 460
            + +L   FLD      K     L  KSL++I    I MH+LL+ +G EIV    ESI++P
Sbjct: 1692 EAHLTHKFLD-----TKQRFHVLAEKSLISIEEGWIKMHNLLELLGREIVCHEHESIREP 1746

Query: 461  GKRSRLWHPEDIYQVLNENTSLPT--GINLDS--------LKELYLGGCSNLKRFPEISC 510
            GKR  L    DI +VL ++T   +  GI  +S        + E    G SNLK F  I C
Sbjct: 1747 GKRQFLVDARDICEVLTDDTGSKSVVGIYFNSAELLGELNISERAFEGMSNLK-FLRIKC 1805

Query: 511  NIED-----------------LDLKETAIEELPSSI--------------------GNLS 533
            +  D                 L+     +  LPS+                     GNLS
Sbjct: 1806 DRSDKMYLPRGLKYISRKLRLLEWDRFPLTCLPSNFCTEYLVELNMRHSKLVKLWEGNLS 1865

Query: 534  --RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
               L  ++L +   LK +        +L+ L L GC  L +LP  IG+  +L+ L+L   
Sbjct: 1866 LGNLKWMNLFHSKNLKELPD-FSTATNLQTLILCGCSSLVELPYSIGSANNLQKLHLCRC 1924

Query: 591  KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                ++P+S+  L KL ++ L+ C +L+ +P
Sbjct: 1925 TSLVELPASIGNLHKLQNVTLKGCSKLEVVP 1955



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 93/183 (50%), Gaps = 35/183 (19%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP+ INL SL+ L L  CS  K FPEIS NIE L L  TA+EE+PSSI + SRL  L +
Sbjct: 988  ALPSNINLKSLERLDLTDCSQFKSFPEISTNIECLYLDGTAVEEVPSSIKSWSRLTVLHM 1047

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +                             EKL E    L+ + +L   E D +++   +
Sbjct: 1048 S---------------------------YFEKLKEFSHVLDIITWLEFGE-DIQEVAPWI 1079

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
            K++S+L  LRL  C++L SLP+LP   S I+A  C SL+TL  S       +    + NF
Sbjct: 1080 KEISRLHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETLDCS------YNNPLSLLNF 1133

Query: 660  SNC 662
            + C
Sbjct: 1134 AKC 1136



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 5/145 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP   N  +L+ L LG CS+L   P     + N+++LDL   +++ +LPS IGN + L  
Sbjct: 798 LPFMGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEI 857

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
           LDL  CS L  + + + ++ +L RL+LSGC  L +LP  +GN+  L+ LNL    +  K+
Sbjct: 858 LDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKL 917

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP 621
           PSS    + L  L L  C  L  LP
Sbjct: 918 PSSFGHATNLWRLDLSGCSSLVELP 942



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 7/148 (4%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE----TAIEELPSSIGNLSRLV 536
            +PT I ++ +L  L L GCS+L   P    NI +L +      + + +LPSS G+ + L 
Sbjct: 869  IPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLW 928

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
             LDL+ CS L  + S + N+ +L+ LNL  C  L KLP  IGNL  L  L+LA  +  E 
Sbjct: 929  RLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEA 988

Query: 596  IPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            +PS++  L  L  L L +C + +S PE+
Sbjct: 989  LPSNI-NLKSLERLDLTDCSQFKSFPEI 1015



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 6/162 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK + L    +LK  P++S   N+E+L LK   ++ ++PS +G L +L  L L  C+
Sbjct: 663 LRNLKWMDLSYSISLKELPDLSTATNLEELILKYCVSLVKVPSCVGKLGKLQVLCLHGCT 722

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            +  + S   N+  L+ L+L+ C  L +LP  IGN  +L+ L+L      K+P S+ + +
Sbjct: 723 SILELPSFTKNVTGLQSLDLNECSSLVELPSSIGNAINLQNLDLGCLRLLKLPLSIVKFT 782

Query: 605 KLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSLKTLSNS 643
            L    L  C  L  LP +   +++      +C+SL  L +S
Sbjct: 783 NLKKFILNGCSSLVELPFMGNATNLQNLDLGNCSSLVELPSS 824



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 486  INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTN 542
            ++L +LK + L    NLK  P+ S   N++ L L   +++ ELP SIG+ + L  L L  
Sbjct: 1864 LSLGNLKWMNLFHSKNLKELPDFSTATNLQTLILCGCSSLVELPYSIGSANNLQKLHLCR 1923

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI 577
            C+ L  + + + NL  L+ + L GC KLE +P  I
Sbjct: 1924 CTSLVELPASIGNLHKLQNVTLKGCSKLEVVPTNI 1958


>gi|298953299|gb|ADI99934.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 1178

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 231/745 (31%), Positives = 347/745 (46%), Gaps = 187/745 (25%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R NF SHL+ AL ++ +  FID+KL RG +IS SL  +I+ + ISIVI
Sbjct: 47  YDVFLSFRGEDTRTNFTSHLDMALRQKGVNVFIDNKLERGEQISESLFKSIQEASISIVI 106

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSLG 123
           FS+ YASS WCL+ELV I+E K   GQ V PVFY VDPSD            A + P   
Sbjct: 107 FSQNYASSSWCLDELVNIIECKKSKGQNVFPVFYKVDPSDIRKQTGSFGEALAKHQPKFQ 166

Query: 124 -----WMGIFDIPTSESVLIEGN------VNDISKKLSDLF-----PSDNKDQLVGVESI 167
                W        + S    G       + D+ KK+  +      P       VG++S 
Sbjct: 167 TKTQIWREALTTAANLSGWNLGTRKEADLIGDLVKKVLSVLNRTCTPLYVAKYPVGIDSK 226

Query: 168 IKEIE---SQLLSGSTEFN--------------TVGIWGIGGIGKTTIASAIYSNISSHF 210
           ++ ++     L   S +F+               VG++GIGGIGKTT+A A+Y+ I+S F
Sbjct: 227 LEYMKLRSHNLFEKSNKFHYRKQHEYESDTGVYMVGLYGIGGIGKTTLAKALYNKIASQF 286

Query: 211 EGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVLIVF 250
           E   F+ N+R+ S++  GLA +                     +N  R RL   KVLIV 
Sbjct: 287 EACCFLSNVREASKQFNGLAQLQETLLYEILTVDLKVINLDRGINIIRNRLCLKKVLIVL 346

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+  L+Q++ L+G  D F  GSR+I+TTR+  LL +H    + ++  + E   ++++ L
Sbjct: 347 DDVDKLEQLEALVGGRDWFGQGSRIIVTTRNKHLLSSHGFDEMENILGLDE---DEAIEL 403

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
           FS +AF +NHP++ +L+LS     Y  G  LAL VLGS+L    + EW S +++ +   +
Sbjct: 404 FSWHAFKKNHPSSNYLDLSKRATSYCKGHSLALVVLGSFLCTRDQVEWCSILDEFENSLN 463

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
            DI+ +L++S+DGL+D                                K+G   + G+SL
Sbjct: 464 KDIKDILQLSFDGLED--------------------------------KMGHKIVCGESL 491

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINL 488
                                       + GKRSRLW  +D+++VL  N  T    GI L
Sbjct: 492 ----------------------------ELGKRSRLWLVQDVWEVLVNNSGTDAVKGIKL 523

Query: 489 DSLKELYLGGCSNLKRFPEISCNIEDLDLK-------ETAIEELPSSIG----------- 530
           D          + L   P+    +++L L         T IE LP S+            
Sbjct: 524 D------FPNSTRLDVDPQAFRKMKNLRLLIVQNARFSTKIEYLPDSLKWIKWHGFRQPT 577

Query: 531 -----NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----------- 574
                 +  LV LDL + S +K+   RL + + L+ ++LS    LEK+P           
Sbjct: 578 FPSFFTMKNLVGLDLQH-SFIKTFGKRLEDCERLKYVDLSYSTFLEKIPNFSAASNLEEL 636

Query: 575 ------------EEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                       + + +L+ L  LNL    + +K+P     LS L  L L  CK+L+ +P
Sbjct: 637 YLTNCTNLGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFMLSSLKKLNLSYCKKLEKIP 696

Query: 622 ELPCGS---SIHARHCTSLKTLSNS 643
           +L   S   S+H   CT+L+ +  S
Sbjct: 697 DLSSASNLTSLHIYECTNLRVIHES 721



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 5/144 (3%)

Query: 482 LPTG-INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP G   L SLK+L L  C  L++ P++S   N+  L + E T +  +  S+G+L +L  
Sbjct: 671 LPRGYFMLSSLKKLNLSYCKKLEKIPDLSSASNLTSLHIYECTNLRVIHESVGSLDKLEG 730

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L  C+ L  + S L +LKSL  L+LSGC KLE  P    N++SL  L+L     +++P
Sbjct: 731 LYLKQCTNLVKLPSYL-SLKSLLCLSLSGCCKLESFPTIAKNMKSLRTLDLDFTAIKELP 789

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP 621
           SS++ L++L  L+L  C  L SLP
Sbjct: 790 SSIRYLTELWTLKLNGCTNLISLP 813



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           T +E++P+     S L +L LTNC+ L  +   + +L  L  LNL GC  L+KLP     
Sbjct: 619 TFLEKIPN-FSAASNLEELYLTNCTNLGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFM 677

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS-----SIHARH 633
           L SL+ LNL+  K  EKIP  +   S L+ L +  C  L+ + E   GS      ++ + 
Sbjct: 678 LSSLKKLNLSYCKKLEKIP-DLSSASNLTSLHIYECTNLRVIHE-SVGSLDKLEGLYLKQ 735

Query: 634 CTSL 637
           CT+L
Sbjct: 736 CTNL 739



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 75/186 (40%), Gaps = 59/186 (31%)

Query: 498 GCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC 554
           GC  L+ FP I+ N++ L   DL  TAI+ELPSSI  L+ L  L L  C+ L S+ + + 
Sbjct: 758 GCCKLESFPTIAKNMKSLRTLDLDFTAIKELPSSIRYLTELWTLKLNGCTNLISLPNTIY 817

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIG-----------------------------------N 579
            L+SL  L LSGC      P++                                      
Sbjct: 818 LLRSLENLLLSGCSIFGMFPDKWNPTIQPVCSPSKMMETALWSLKVPHFLVPNESFSHFT 877

Query: 580 LESLEYLNLAEKDF---------------------EKIPSSMKQLSKLSDLRLQNCKRLQ 618
           L  L+  N++  +F                       +PS + +   L +L L+NCK LQ
Sbjct: 878 LLDLQSCNISNANFLDILCDVAPFLSDLRLSENKFSSLPSCLHKFMSLWNLELRNCKFLQ 937

Query: 619 SLPELP 624
            +P LP
Sbjct: 938 EIPSLP 943


>gi|332330343|gb|AEE43929.1| TIR-NBS-LRR resistance protein muRdr1E [Rosa multiflora]
          Length = 1143

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 240/700 (34%), Positives = 361/700 (51%), Gaps = 93/700 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +ASS S+       K+DVFLSFRG+D R  F  +L   L R  I TF DD +L RG  IS
Sbjct: 8   IASSGSAFPW----KYDVFLSFRGEDTRKGFTGYLYHELQRRGIRTFRDDPQLERGTAIS 63

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--- 116
           P L +AIE S+ +IV+ S  YASS WCL EL KILE   + G I+ P+FY V+PS     
Sbjct: 64  PELLTAIEQSRFAIVVLSPNYASSTWCLLELSKILECMEERGTIL-PIFYEVNPSHVRHQ 122

Query: 117 -----------------------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SD 151
                                  G+  +L  +      TSE    E   + +I + L S 
Sbjct: 123 RGSFAEAFQEHQEKFGKGNNEVEGWRDALTKVASLAGWTSEKYRYETELIREIVQALWSK 182

Query: 152 LFPS----DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           L PS     + ++L G++S ++EI+  L   + +   +GIWG+GGIGKTT+A  +Y  IS
Sbjct: 183 LHPSLSVFGSSEKLFGMDSKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLARLVYQKIS 242

Query: 208 SHFEGSYFMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKV 246
             FE   F+ N+R+ S+   GL ++                      +   +R +    V
Sbjct: 243 HQFEVCIFLDNVREVSKTTHGLVDLQKKILSQIFKEENVQVLDVYSGITMIKRCVCNKAV 302

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L+V  D+   +Q++ L+G  D F   SR+IITTRD  +L  H   +    +E+K L+ ++
Sbjct: 303 LLVLDDVDQSEQLENLVGGKDCFGLRSRIIITTRDRHVLVTHGVDQ--KPYELKGLNEDE 360

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L LF   AF    P   + E     + YA G+PLAL++LGS+L G +  EW SA+ KL+
Sbjct: 361 ALQLFCWKAFRNCKPEEYYAEPCKSFVTYAAGLPLALKILGSFLNGRTPGEWNSALAKLQ 420

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
           + P+  + ++LK+S+DGLD+ E+ IFLD ACF +      ++  +D+      I  S L 
Sbjct: 421 QTPYRTVFEILKISFDGLDETEKKIFLDIACFRRLYRNEFMIELVDSSDPCNCITRSVLA 480

Query: 427 GKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT- 484
            KSL+TI S+N++ +HDL+ EMG EIVRQE+ ++PG RSRL   +DI+ V  +NT     
Sbjct: 481 EKSLLTISSDNQVDVHDLIHEMGCEIVRQEN-EEPGGRSRLCLRDDIFHVFTKNTGTEAI 539

Query: 485 -GI--NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL--- 538
            GI  +LD L+E       NL+ F ++ C ++ L +    +   P  + N  R +     
Sbjct: 540 EGILLHLDKLEE----ADWNLETFSKM-CKLKLLYIHNLRLSVGPKFLPNALRFLSWSWY 594

Query: 539 ------------DLTNCSGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLES 582
                       +LT  S + S    L N    L +L+ ++LS  + L + P+  G + +
Sbjct: 595 PSKSLPPCFQPDELTELSLVHSNIDHLWNGIKYLVNLKSIDLSYSINLRRTPDFTG-IPN 653

Query: 583 LEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           LE L L    +  KI  S+  L +L     +NCK ++SLP
Sbjct: 654 LEKLVLEGCTNLVKIHPSIALLKRLKIWNFRNCKSIKSLP 693



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 40/235 (17%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR ++W+  +   +     SLP+ +N++ L+   + GCS LK+ PE    +  + +L L 
Sbjct: 676 KRLKIWNFRNCKSI----KSLPSEVNMEFLETFDVSGCSKLKKIPEFEGQTNRLSNLSLG 731

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNC----------------------------SGLKSV 549
            TA+E+LPSSI +LS  LV+LDL+                                L  +
Sbjct: 732 GTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPLIPL 791

Query: 550 SSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            + L +   LR L L+ C   E ++P +IG+L SL  L L   +F  +P+S+  LSKL++
Sbjct: 792 LAPLKHFSCLRTLKLNDCNLCEGEIPNDIGSLSSLRRLELGGNNFVSLPASIYLLSKLTN 851

Query: 609 LRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
             + NCKRLQ LPEL     +  + +CT L+   +   L   ++  W   N  NC
Sbjct: 852 FNVDNCKRLQQLPELSAKDVLPRSDNCTYLQLFPDPPDLCRITTNFW--LNCVNC 904


>gi|9279731|dbj|BAB01321.1| disease resistance protein RPP1-WsB [Arabidopsis thaliana]
          Length = 1285

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 233/744 (31%), Positives = 354/744 (47%), Gaps = 127/744 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KH VF SF G DVR  F+SH+  A   + I+ FID+ + R   I P L  AI GS+I+IV
Sbjct: 52  KHQVFPSFHGADVRKTFLSHVLEAFRGKGIDPFIDNSIERSKSIGPELVEAIRGSRIAIV 111

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSE 134
           + S  YASS WC+NELV+I++ K   GQIV+ +FY VDP+        G  G     T +
Sbjct: 112 LLSRNYASSSWCMNELVEIMKCKEDLGQIVITIFYEVDPTHIK--KQTGDFGKVFKETCK 169

Query: 135 SVLIEGNVNDISKKLSDL-----FPSDNKD--QLVGVESIIKEIESQLLSGSTEFNTVGI 187
               E  +    K L  +     + S N D   L+G+ + ++ + + L     +   +GI
Sbjct: 170 GKTKE-EIKRWRKALEGVATIAGYHSSNWDFEALIGMGAHMENMRALLRLDLDDVRMIGI 228

Query: 188 WGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD----------------ESEKVGGLAN 231
           WG  GIGKTTIA  + S +S  F+ S  M NI++                +++ +  + N
Sbjct: 229 WGPPGIGKTTIARFLLSQVSKSFQLSTIMVNIKECYPSPCLDEYSVQLQLQNKMLSKMIN 288

Query: 232 ------IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLL 285
                  HL   + RL   KV +V  D+  L Q+D L      F PGSR+IITT +++LL
Sbjct: 289 QKDIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLDALAKETRWFGPGSRIIITTENLRLL 348

Query: 286 KNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQV 345
             HR   + H+++V+  S +++  +F  +AFGQ HP  GF ELS  V + A G+PL L+V
Sbjct: 349 MAHR---INHIYKVEFSSTDEAFQIFCMHAFGQKHPYNGFYELSREVTELAGGLPLGLKV 405

Query: 346 LGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF-----K 400
           +GS L+GMS++EW+  + +L+      I+ +L  SY+ L  E++++FL  ACFF     K
Sbjct: 406 MGSSLRGMSKQEWKRTLPRLRTCLDGKIESILMFSYEALSHEDKDLFLCIACFFNYQKIK 465

Query: 401 GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDP 460
             +++L   FLD      + G+  L  KSL+ I      MH LL ++G EI   +S  DP
Sbjct: 466 KVEKHLADRFLD-----VRQGLYVLAEKSLIHIGTGATEMHTLLVQLGREIAHTQSTNDP 520

Query: 461 GKRSRLWHPEDIYQVLNENTSLPT----GINLD---------SLKELYLGGCSNLK--RF 505
            K   L    +I + L++ T   +    G++ D         ++ E  L   SNL+  RF
Sbjct: 521 RKSLFLVDEREICEALSDETMDSSRRIIGMDFDLSKNGEEVTNISEKGLQRMSNLQFIRF 580

Query: 506 PEISC------------------------NIEDLDLKETAIEE----------LPSSIGN 531
              SC                         ++DL+ +   I            LPS+  N
Sbjct: 581 DGRSCARHSSNLTVVRSSDNNCAHPDTVNALQDLNYQFQEIRLLHWINFRRLCLPSTF-N 639

Query: 532 LSRLVDLDL--TNCSGLKSVSSRLCNLK--------SLRR-------------------L 562
              LV+L++  + C  L   S  L NLK        SL+                    L
Sbjct: 640 PEFLVELNMPSSTCHTLWEGSKALRNLKWMDLSYSISLKELPDLSTATNLEELILKYCSL 699

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +L+ C  L +LP  IGN  +L+ L+L      K+P S+ + + L    L  C  L  LP 
Sbjct: 700 DLNECSSLVELPSSIGNAINLQNLDLGCLRLLKLPLSIVKFTNLKKFILNGCSSLVELPF 759

Query: 623 LPCGSSIH---ARHCTSLKTLSNS 643
           +   +++      +C+SL  L +S
Sbjct: 760 MGNATNLQNLDLGNCSSLVELPSS 783



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 93/183 (50%), Gaps = 35/183 (19%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP+ INL SL+ L L  CS  K FPEIS NIE L L  TA+EE+PSSI + SRL  L +
Sbjct: 947  ALPSNINLKSLERLDLTDCSQFKSFPEISTNIECLYLDGTAVEEVPSSIKSWSRLTVLHM 1006

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +                             EKL E    L+ + +L   E D +++   +
Sbjct: 1007 S---------------------------YFEKLKEFSHVLDIITWLEFGE-DIQEVAPWI 1038

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
            K++S+L  LRL  C++L SLP+LP   S I+A  C SL+TL  S       +    + NF
Sbjct: 1039 KEISRLHGLRLYKCRKLLSLPQLPESLSIINAEGCESLETLDCS------YNNPLSLLNF 1092

Query: 660  SNC 662
            + C
Sbjct: 1093 AKC 1095



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 81/145 (55%), Gaps = 5/145 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP   N  +L+ L LG CS+L   P     + N+++LDL   +++ +LPS IGN + L  
Sbjct: 757 LPFMGNATNLQNLDLGNCSSLVELPSSIGNAINLQNLDLSNCSSLVKLPSFIGNATNLEI 816

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
           LDL  CS L  + + + ++ +L RL+LSGC  L +LP  +GN+  L+ LNL    +  K+
Sbjct: 817 LDLRKCSSLVEIPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKL 876

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP 621
           PSS    + L  L L  C  L  LP
Sbjct: 877 PSSFGHATNLWRLDLSGCSSLVELP 901



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 7/148 (4%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE----TAIEELPSSIGNLSRLV 536
           +PT I ++ +L  L L GCS+L   P    NI +L +      + + +LPSS G+ + L 
Sbjct: 828 IPTSIGHVTNLWRLDLSGCSSLVELPSSVGNISELQVLNLHNCSNLVKLPSSFGHATNLW 887

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
            LDL+ CS L  + S + N+ +L+ LNL  C  L KLP  IGNL  L  L+LA  +  E 
Sbjct: 888 RLDLSGCSSLVELPSSIGNITNLQELNLCNCSNLVKLPSSIGNLHLLFTLSLARCQKLEA 947

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +PS++  L  L  L L +C + +S PE+
Sbjct: 948 LPSNI-NLKSLERLDLTDCSQFKSFPEI 974


>gi|42568255|ref|NP_198990.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|42570590|ref|NP_851117.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|8843884|dbj|BAA97410.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007337|gb|AED94720.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007338|gb|AED94721.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1068

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 221/719 (30%), Positives = 349/719 (48%), Gaps = 107/719 (14%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSS 64
           SSS++ I   ++ VF SF G DVR  F+SHL++    + I TF D K++RG  I P L  
Sbjct: 4   SSSLSCIK--RYQVFSSFHGPDVRKGFLSHLHSVFASKGITTFNDQKIDRGQTIGPELIQ 61

Query: 65  AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------- 117
            I  +++SIV+ S+ YASS WCL+ELV+IL+ K   GQIV+ VFY VDPSD         
Sbjct: 62  GIREARVSIVVLSKKYASSSWCLDELVEILKCKEALGQIVMTVFYEVDPSDVKKQSGVFG 121

Query: 118 -----YCPS------LGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPS 155
                 C        + W   +  + T          +E+ +I+  V D+S KL +L PS
Sbjct: 122 EAFEKTCQGKNEEVKIRWRNALAHVATIAGEHSLNWDNEAKMIQKIVTDVSDKL-NLTPS 180

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
            + + +VG+E+ +K + S L   S E   +GIWG  GIGKTTIA  +++ ISS F    F
Sbjct: 181 RDFEGMVGMEAHLKRLNSLLCLESDEVKMIGIWGPAGIGKTTIARTLFNKISSIFPFKCF 240

Query: 216 MQNIR--------------------DESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTD 255
           M+N++                     E  K   +   HL   ++ L   KVLI+  D+ D
Sbjct: 241 MENLKGSIKGGAEHYSKLSLQKQLLSEILKQENMKIHHLGTIKQWLHDQKVLIILDDVDD 300

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           L+Q+++L      F  GSR+I+TT D  +LK HR   +  ++ V   S  ++L +   +A
Sbjct: 301 LEQLEVLAEDPSWFGSGSRIIVTTEDKNILKAHR---IQDIYHVDFPSEEEALEILCLSA 357

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           F Q+    GF EL+N V +    +PL L V+G+ L+  S+ EWE  +++++     +I  
Sbjct: 358 FKQSSIPDGFEELANKVAELCGNLPLGLCVVGASLRRKSKNEWERLLSRIESSLDKNIDN 417

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           +L++ YD L  E+Q++FL  ACFF       +   L   +     G + L  +SLV IS 
Sbjct: 418 ILRIGYDRLSTEDQSLFLHIACFFNNEKVDYLTALLADRKLDVVNGFNILADRSLVRIST 477

Query: 436 NK--ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS- 490
           +   +  H LLQ++G  IV ++   +PGKR  L   E+I  VL + T   +  GI+ D+ 
Sbjct: 478 DGHVVMHHYLLQKLGRRIVHEQWPNEPGKRQFLIEAEEIRDVLTKGTGTESVKGISFDTS 537

Query: 491 -LKELYLG-----GCSNL---------------------------------KRFPEISC- 510
            ++E+ +G     G  NL                                 + +P  S  
Sbjct: 538 NIEEVSVGKGAFEGMRNLQFLRIYRDSFNSEGTLQIPEDMEYIPPVRLLHWQNYPRKSLP 597

Query: 511 ------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
                 ++  + +  + +++L   I  L  L  +D++    LK + + L    +L  L+L
Sbjct: 598 QRFNPEHLVKIRMPSSKLKKLWGGIQPLPNLKSIDMSFSYSLKEIPN-LSKATNLEILSL 656

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             C  L +LP  I NL  LE LN+      K+  +   L+ L  L +  C  L++ P++
Sbjct: 657 EFCKSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLERLDMTGCSELRTFPDI 715



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 41/197 (20%)

Query: 474 QVLN-ENTSL----PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
           ++LN EN S+    PT INL SL+ L + GCS L+ FP+IS NI+ L+L +T IE++P S
Sbjct: 676 EILNVENCSMLKVIPTNINLASLERLDMTGCSELRTFPDISSNIKKLNLGDTMIEDVPPS 735

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
           +G  SRL  L + +              +SL+RL++  C+                 L L
Sbjct: 736 VGCWSRLDHLYIGS--------------RSLKRLHVPPCIT---------------SLVL 766

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
            + + E IP S+  L++L  L + +C++L+S+  LP     + A  C SLK +  S    
Sbjct: 767 WKSNIESIPESIIGLTRLDWLNVNSCRKLKSILGLPSSLQDLDANDCVSLKRVCFSFHNP 826

Query: 648 TRSSKHWDIFNFSNCSN 664
            R+       +F+NC N
Sbjct: 827 IRA------LSFNNCLN 837


>gi|359806248|ref|NP_001241468.1| TMV resistance protein N-like [Glycine max]
 gi|223452617|gb|ACM89635.1| disease-resistance protein [Glycine max]
          Length = 563

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 187/522 (35%), Positives = 274/522 (52%), Gaps = 63/522 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           ++DVF+SFRG D R+ FV HL A L R+ I  F DDK L +G  IS  L  AI+ S++SI
Sbjct: 43  RYDVFISFRGPDTRNTFVDHLYAHLLRKGIFVFKDDKKLQKGESISAQLLQAIQDSRLSI 102

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY--------------- 118
           ++FS+ YASS WCL+E+  I + K +  Q V PVFY VDPS   +               
Sbjct: 103 IVFSKQYASSTWCLDEMAAIADCKQQSNQTVFPVFYDVDPSHVRHQNGAYEVAFVSHRSR 162

Query: 119 ------------------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                               S GW  + + P  E   IE  V ++ K L   F S   D 
Sbjct: 163 FREDPDKVDRWARAMTDLANSAGW-DVMNKP--EFREIENIVQEVIKTLGHKF-SGFVDD 218

Query: 161 LVGVESIIKEIES--QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           L+G++S ++E+E   +L S +     +GI G+GGIGKTT A  +Y  IS  F+   F++N
Sbjct: 219 LIGIQSRVQELEGSLKLSSNNDNVRVLGICGMGGIGKTTQAVVLYDRISYKFDACCFVEN 278

Query: 219 IRDESEKVGGLA---------------NIHLNFE-----RRRLSRMKVLIVFYDLTDLKQ 258
           +       G  A                I+  FE     R RL  +KVLI   ++  ++Q
Sbjct: 279 VNKIYRDGGATAIQKQIVRQTLDEKNLEIYSPFEISGIVRNRLHNIKVLIFLDNVDQIEQ 338

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +  L    +    GSR+II TRD  +LK + G+ V H  +V  ++ ND+  LF   AF  
Sbjct: 339 LQELAINPNFLFEGSRMIIITRDEHILKVY-GAHVIH--KVSLMNDNDARKLFYSKAFKS 395

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
              ++  +EL   V+KY   +PLA++V+GS+L   +  +W+ A+++ +  P   I  VL+
Sbjct: 396 EDQSSSCVELIPEVLKYVQCLPLAIKVIGSFLCTRNATQWKDALDRFQNSPDNGIMDVLQ 455

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           +S DGL  EE+ IFL  ACFFK   +      L+ C     IGI RL+ KSL+T+ + +I
Sbjct: 456 ISIDGLQYEEKEIFLHIACFFKEEMEDYAKRILNCCGLHTHIGIPRLIEKSLITLRDQEI 515

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            MHD+LQE+G +IVR +  + PG  SR+W  ED ++V+   T
Sbjct: 516 HMHDMLQELGKKIVRNQFPEQPGSWSRIWLYEDFFRVMTTQT 557


>gi|15235932|ref|NP_193429.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|5302808|emb|CAB46049.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268447|emb|CAB80967.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|332658428|gb|AEE83828.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1041

 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 243/696 (34%), Positives = 343/696 (49%), Gaps = 96/696 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF SF G DVR  F+SHL  AL R  I TF+D  + R   I+  L +AI  ++ISIV
Sbjct: 12  RYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADELITAIREARISIV 71

Query: 75  IFSEGYASSRWCLNELVKILES-KNK-YGQIVVPVFYLVDPS------------------ 114
           IFSE YASS WCLNELV+I +  K+K   Q+V+PVFY VDPS                  
Sbjct: 72  IFSENYASSTWCLNELVEIHKCHKDKDLDQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCE 131

Query: 115 DAGYCPSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
           D        W+  + DI            SE+ ++    ND+S KL  L P    D LVG
Sbjct: 132 DKPEDQKQRWVKALTDISNLAGEDLRNGPSEAAMVVKIANDVSNKLFPL-PKGFGD-LVG 189

Query: 164 VESIIKEIESQLLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           +E  I+ I+ +L   S E    VGIWG  GIGK+TI  A++S +SS F    F+      
Sbjct: 190 IEDHIEAIKLKLCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTS 249

Query: 223 SEKVGG---------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
              V G         L+ I         H     +RL   KVLI+  D+ +L+ +  L+G
Sbjct: 250 GSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVG 309

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           + + F  GSR+I+ T+D QLLK H    +  ++EVK  S   +L +  + AFG+  P   
Sbjct: 310 KAEWFGSGSRIIVITQDRQLLKAHE---IDLIYEVKLPSQGLALKMICQYAFGKYSPPDD 366

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F EL+  V K A  +PL L VLGS LK  S+EEW   + +L+   + DI K L+VSY  L
Sbjct: 367 FKELAFEVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRL 426

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDL 443
           D ++Q+IF   A  F G     + +FL     +  I +  L  KSL+ ++ N+ I MH+L
Sbjct: 427 DPKDQDIFHYIAWLFNGWKVKSIKDFL-GDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNL 485

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT----------------------- 480
           LQ++  EI R+ES  +PGKR  L + E+I  V  +NT                       
Sbjct: 486 LQKLATEIDREESNGNPGKRRFLENAEEILDVFTDNTVNENSFQGMLNLQYLKIHDHSWW 545

Query: 481 -------SLPTGINL--DSLKELYLGGCSNLKRFPE--ISCNIEDLDLKETAIEELPSSI 529
                   LP G+      LK L+   C  LKR P    +  + +L +  + +E+L +  
Sbjct: 546 QPRETRMRLPNGLVYLPRKLKWLWWDNCP-LKRLPSNFKAEYLVELRMVNSDLEKLWNGT 604

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
             L  L  + L N   LK +   L    +L RL++S C  LE  P  + N ESLEYL+L 
Sbjct: 605 QLLGSLKKMILRNSKYLKEIPD-LSYAMNLERLDISDCEVLESFPSPL-NSESLEYLDLL 662

Query: 590 E-KDFEKIPSSMKQLSKLS-DLRLQNCKRLQSLPEL 623
                   P ++ Q+S    D+ + +C   +SLP L
Sbjct: 663 RCPKLRNFPETIMQISPYGIDIDVADCLWNKSLPGL 698



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 32/185 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  +NL SL  + L GCS+L+ FP+IS +I  L+L +TAIEE+P    N SRL+ L + 
Sbjct: 802 LPMDVNLSSLHTVNLKGCSSLRFFPQISKSIAVLNLDDTAIEEVP-CFENFSRLIVLSMR 860

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
            C             KSLRR              +I    S++ LNLA+   E++P  ++
Sbjct: 861 GC-------------KSLRRF------------PQIST--SIQELNLADTAIEQVPCFIE 893

Query: 602 QLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIF 657
             SKL  L +  CK+L+++      L     +    C  + +  + ST++     H++  
Sbjct: 894 NFSKLKILNMSGCKKLKNISPNIFRLTWLKKVDFTDCGGVISALSDSTVVATMDDHYEKI 953

Query: 658 NFSNC 662
               C
Sbjct: 954 EKMRC 958



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 10/146 (6%)

Query: 479 NTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLK-ETAIEELPSSIGNLSRLVD 537
           N SLP    LD L+      C+  K  PE   ++ +L L+    +E+L   + +L +L  
Sbjct: 692 NKSLPGLDYLDCLRR-----CNPSKFLPE---HLVNLKLRGNNMLEKLWEGVQSLGKLER 743

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           +DL+ C  L  +   L    +L  LNLS C  L  LP  IGN + L  L + E    K+ 
Sbjct: 744 MDLSECENLIEIPD-LSKATNLVNLNLSNCKSLVTLPSTIGNHQKLYTLEMKECTGLKVL 802

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPEL 623
                LS L  + L+ C  L+  P++
Sbjct: 803 PMDVNLSSLHTVNLKGCSSLRFFPQI 828



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 22/179 (12%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE----DLDLKETAI-EELP--SSIGNLS 533
           S P+ +N +SL+ L L  C  L+ FPE    I     D+D+ +    + LP    +  L 
Sbjct: 646 SFPSPLNSESLEYLDLLRCPKLRNFPETIMQISPYGIDIDVADCLWNKSLPGLDYLDCLR 705

Query: 534 R----------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
           R          LV+L L   + L+ +   + +L  L R++LS C  L ++P+ +    +L
Sbjct: 706 RCNPSKFLPEHLVNLKLRGNNMLEKLWEGVQSLGKLERMDLSECENLIEIPD-LSKATNL 764

Query: 584 EYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLK 638
             LNL+  K    +PS++    KL  L ++ C  L+ LP     SS+H    + C+SL+
Sbjct: 765 VNLNLSNCKSLVTLPSTIGNHQKLYTLEMKECTGLKVLPMDVNLSSLHTVNLKGCSSLR 823


>gi|15239799|ref|NP_199725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10176947|dbj|BAB10096.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008392|gb|AED95775.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 980

 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 218/716 (30%), Positives = 347/716 (48%), Gaps = 116/716 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVF SFRG+DVR NF+SHL      + I TF DD + R   I   L  A+  SKI +V
Sbjct: 14  KYDVFPSFRGEDVRGNFLSHLMKEFESKGIVTFKDDLIERSQTIGLELKEAVRQSKIFVV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---------GYCPSL--- 122
           IFS+ YASS WCL+ELV+IL+ K +  + ++P+FY V+PSD          G+  +    
Sbjct: 74  IFSKNYASSSWCLDELVEILKCKEE--RRLIPIFYKVNPSDVRNQTGKFGRGFRETCEGK 131

Query: 123 ------GWMGIF----DIPTSESVLIEGNVNDISKKLSDLF------PSDNKDQLVGVES 166
                  W        +I   +S   +   + ++K   D+       PS++ + ++G+ES
Sbjct: 132 NDETQNKWKAALTEAANIAGEDSQSWKNEADFLTKIAKDILAKLNGTPSNDFENIIGIES 191

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            ++++   L     +   VGIWG  GIGKTTIA  ++S  S  F  + FM+N+R   +++
Sbjct: 192 HMEKMVQLLCLNDDDVRMVGIWGPAGIGKTTIARVLHSRFSGDFRFTVFMENVRGNYQRI 251

Query: 227 ---GGLANIHLNFERR---------------------RLSRMKVLIVFYDLTDLKQIDLL 262
              GG  N+    ++                      RL + KVLIV  D+  ++Q++ L
Sbjct: 252 VDSGGEYNLQARLQKEFLPIIFNQKDRKINHLWKIEERLKKQKVLIVLGDVDKVEQLEAL 311

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
                 F PGSR+I+TT+D Q+L  H    + H++EVK      +L +    AF QN   
Sbjct: 312 ANETRWFGPGSRIIVTTKDKQILVGHE---INHIYEVKLPCRKTALEILCLYAFKQNVAP 368

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             F+++   V + +  +PL L+VLGS+++G S++ W+  + +L       ++K+LK+SYD
Sbjct: 369 DDFMDVVVEVAELSGHLPLGLRVLGSHMRGKSKDRWKLELGRLTTSLDEKVEKILKISYD 428

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITMH 441
            L   ++ +FL  AC F G +  LV   L        +G+  L+ KSL+ I++++ I MH
Sbjct: 429 DLHIRDKALFLHIACMFNGENIDLVKQMLVNSDLDVSLGLQLLLDKSLIQINDDREIVMH 488

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS--------L 491
            LL +MG E+V Q S  +PGKR  L++ ++   +L+ NT      GI+LD+        +
Sbjct: 489 SLLLKMGKEVVCQHS-SEPGKRQFLFNTKETCNILSNNTGSEAVLGISLDTSEIQNDVFM 547

Query: 492 KELYLGGCSNLK--RF----------------------PEI------------------- 508
            E       NLK  RF                      P +                   
Sbjct: 548 SERVFEDMRNLKFLRFYNKKIDENPSLKLHLPRGLNYLPAVRLLHWDSYPMKYIPSQFRP 607

Query: 509 SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
            C +E L +  + + +L      L+ L  +DL+  + L  V   L    SL  L L GC 
Sbjct: 608 ECLVE-LRMMHSKVVKLWEGTQTLAYLKTIDLSFSNNLVEVPD-LSKAISLETLCLEGCQ 665

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            L +LP  + NL  L++L L   +  E IP  +  L+ L  L ++ C +L+S P++
Sbjct: 666 SLAELPSSVLNLHRLKWLRLTMCEKLEVIPLHI-NLASLEVLDMEGCLKLKSFPDI 720



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 28/163 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P  INL SL+ L + GC  LK FP+IS NIE + +K T IEE+P SI   SRL  LD++
Sbjct: 694 IPLHINLASLEVLDMEGCLKLKSFPDISKNIERIFMKNTGIEEIPPSISQWSRLESLDIS 753

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
            C  LK  S                      +P      +S+ Y+ L +   E++P  +K
Sbjct: 754 GCLNLKIFSH---------------------VP------KSVVYIYLTDSGIERLPDCIK 786

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNS 643
            L+ L  L + NC++L SLPELP    I  A +C SL+ +S+S
Sbjct: 787 DLTWLHYLYVDNCRKLVSLPELPSSIKILSAINCESLERISSS 829


>gi|451798982|gb|AGF69189.1| TMV resistance protein N-like protein 3 [Vitis labrusca]
          Length = 1524

 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 203/540 (37%), Positives = 296/540 (54%), Gaps = 86/540 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R NF  HL   L    I+TF DD+ L +G +I+  L  AIE       
Sbjct: 20  YDVFLSFRGGDTRKNFTDHLYTTLTASGIQTFRDDEELEKGGDIASDLLRAIE------- 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLGW----- 124
                   SRWCLNELVKI+E K++   +V+P+FY VDPSD       +  +L +     
Sbjct: 73  -------ESRWCLNELVKIIERKSQKESMVLPIFYHVDPSDVRNQRGSFGDALAYHERDA 125

Query: 125 -------MGIFDIPTSESVLIEG-NVNDI--SKKLSDLFPSDNKDQLVGVESIIKEIESQ 174
                  +  + I   E+  + G +VND   ++ L   + ++   ++V  ++II+ +  Q
Sbjct: 126 NQEKKEMIQKWRIALREAANLSGCHVNDQLKTESLQHWYETEVVKEIV--DTIIRRLNHQ 183

Query: 175 LLS------------------GSTEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGS 213
            LS                   +TE N V + GI GIG   KTTIA AIY+ IS  ++GS
Sbjct: 184 PLSVGKSIVGIGVHLEKLKSLMNTELNMVSVIGIYGIGGVGKTTIAKAIYNEISHQYDGS 243

Query: 214 YFMQNIRDESE-----------------KVGGLANIHL--NFERRRLSRMKVLIVFYDLT 254
            F+ NI++ S+                 K   + N++   +  +R L   +VL++F D+ 
Sbjct: 244 SFLINIKERSKGDILQLQQELLHGILRGKFFKINNVNEGNSMIKRCLRSNRVLVIFDDVD 303

Query: 255 DLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
           +LKQ++ L    D F   S +IIT+RD  +L  +    V   +EV +L+  +++ LFS  
Sbjct: 304 ELKQLEYLAEEKDWFHAKSTIIITSRDKHVLAQYG---VDIPYEVSKLNKEEAIELFSLW 360

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF QN P   +  LS  +I YA+G+PLAL+VLG+ L G     WESA+ KLK +PHM+I 
Sbjct: 361 AFKQNRPQEVYKNLSYNIIDYADGLPLALKVLGASLFGKKISNWESALCKLKIIPHMEIH 420

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            VL++S+DGLDD E+ IFLD ACFFKG+D+  V   L      A+  I+ L  + L+T+S
Sbjct: 421 NVLRISFDGLDDIEKGIFLDIACFFKGDDRDFVSRILGP---HAEHAITTLDDRCLITVS 477

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLW--HPEDIYQVLNENTSLPTGINLDSLK 492
            N + MHDL+Q+MG EI+RQE  +DPG+RSRLW  +  D+  + N+ T    G+ LD  K
Sbjct: 478 KNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLWDSNANDVL-IRNKGTRAIEGLFLDRCK 536



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 85/148 (57%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP  I  L  L+ L   GCS L+RFPEI  N+  L   DL  TAI +LPSSI +L+ L  
Sbjct: 670 LPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTAIMDLPSSITHLNGLQT 729

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKI 596
           L L  CS L  +   +C+L SL  L+L  C  +E  +P +I +L SL+ LNL    F  I
Sbjct: 730 LLLQECSKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSI 789

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P+++ QLS L  L L +C  L+ + ELP
Sbjct: 790 PTTINQLSSLEVLNLSHCNNLEQITELP 817



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 9/151 (5%)

Query: 517  LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
             K + + E+P  IGN   L  L L +C  L S+ S +   KSL  L+ SGC +LE +PE 
Sbjct: 1094 FKGSDMNEVPI-IGNPLELDSLCLRDCKNLTSLPSSIFGFKSLATLSCSGCSQLESIPEI 1152

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS----IHAR 632
            + ++ESL  L+L+    ++IPSS+++L  L  L L NCK L +LPE  C  +    +   
Sbjct: 1153 LQDMESLRKLSLSGTAIKEIPSSIQRLRGLQYLLLSNCKNLVNLPESICNLTSLKFLIVE 1212

Query: 633  HCTSLKTLSNS----STLLTRSSKHWDIFNF 659
             C S K L ++     +LL  S    D  NF
Sbjct: 1213 SCPSFKKLPDNLGRLQSLLHLSVGPLDSMNF 1243



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 16/168 (9%)

Query: 481 SLPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLKET-AIEELP--SSIGNLSR 534
           SLP   +  +L +L L G SN+K   R  ++   +  +DL  +  +  +P  SS+ NL  
Sbjct: 595 SLPMNFHAKNLVQLVLRG-SNIKQVWRGNKLHDKLRVIDLSYSFHLIGIPDFSSVPNLEI 653

Query: 535 LVDLDLT--NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
           L+ +  T   C  L+ +   +  LK L+ L+ +GC KLE+ PE  GN+  L  L+L+   
Sbjct: 654 LILIGCTMHGCVNLELLPRNIYKLKHLQILSCNGCSKLERFPEIKGNMRKLRVLDLSGTA 713

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
              +PSS+  L+ L  L LQ C +L  +P       IH  H +SL+ L
Sbjct: 714 IMDLPSSITHLNGLQTLLLQECSKLHKIP-------IHICHLSSLEVL 754



 Score = 45.8 bits (107), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 28/155 (18%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIG----- 530
            TSLP+ I    SL  L   GCS L+  PEI  ++E L    L  TAI+E+PSSI      
Sbjct: 1123 TSLPSSIFGFKSLATLSCSGCSQLESIPEILQDMESLRKLSLSGTAIKEIPSSIQRLRGL 1182

Query: 531  -------------------NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
                               NL+ L  L + +C   K +   L  L+SL  L++     + 
Sbjct: 1183 QYLLLSNCKNLVNLPESICNLTSLKFLIVESCPSFKKLPDNLGRLQSLLHLSVGPLDSMN 1242

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                 +  L SL  L L   +  +IPS +  LS L
Sbjct: 1243 FQLPSLSGLCSLRQLELQACNIREIPSEICYLSSL 1277


>gi|357521387|ref|XP_003630982.1| NBS-LRR resistance-like protein [Medicago truncatula]
 gi|355525004|gb|AET05458.1| NBS-LRR resistance-like protein [Medicago truncatula]
          Length = 1177

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 180/486 (37%), Positives = 271/486 (55%), Gaps = 76/486 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           K+DVFLS+RG+D R NF++HL A L                           + S I +V
Sbjct: 20  KYDVFLSYRGEDTRDNFITHLYAELIH-----------------------LYDESMIYVV 56

Query: 75  IFSEGYASSRWCLNELVKILESKNKY--GQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPT 132
           + SE YASS WCL        S   +  G     V +    ++A +         F+  T
Sbjct: 57  VLSENYASSTWCLK-----FTSNGSWELGPNRRHVSFYRLKTNASF--------FFNYVT 103

Query: 133 SESVLIEGNVNDI--SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGI 190
            ++ LIE  V DI    KL+  F +D +  ++G+++ I++I               +  I
Sbjct: 104 GQNTLIEDIVKDILIKLKLNCSFLNDYQG-MIGIDNHIEQIP--------------LLHI 148

Query: 191 GGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG-----------------GLANIH 233
               KTTIASAIY  +++ F  +  + N++ E E+ G                   + + 
Sbjct: 149 ESRRKTTIASAIYRKLATQFSFNSIILNVQQEIERFGLHHIQSKYRFELLGENNTSSGLC 208

Query: 234 LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
           L+F++R L   K L+V  D+ +  Q+  LIG+L  F PGSR+I+T+RD+Q+LKN    + 
Sbjct: 209 LSFDQR-LKWTKALLVLDDVNNSDQLRDLIGKLSKFAPGSRIIVTSRDMQVLKN---VKA 264

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
             ++EVKE+++++SL LF  NAF Q++P  G++ LS  ++ YA  VPLAL+VLG  L G 
Sbjct: 265 DGIYEVKEMNFHESLRLFCLNAFKQSYPLEGYVGLSENILNYAKRVPLALKVLGFLLCGR 324

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
            +E WES + KL ++P  DI +VLK+SY  LD+E+  IFLD ACF++G+ + +V+  LD+
Sbjct: 325 PKEAWESQLQKLDKLPENDIFEVLKLSYVELDEEQNEIFLDIACFYRGHLENVVLQTLDS 384

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           C FS+ IGI  L  + L++I  ++I MHDL+QEMG EIV Q+ + DPGKRSRLW   +IY
Sbjct: 385 CGFSSLIGIEVLKDRGLISIVESRIVMHDLIQEMGHEIVHQQCVNDPGKRSRLWKHREIY 444

Query: 474 QVLNEN 479
           +VL  N
Sbjct: 445 KVLRNN 450



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 102/184 (55%), Gaps = 5/184 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIG-NLSRLV 536
           + P+ I    LK+L L GCS LK FP+I    E    ++L +TAI+ELPSS+  NL  L 
Sbjct: 760 TFPSSIFKLKLKKLDLHGCSMLKNFPDILEPAETFVHINLTKTAIKELPSSLEYNLVALQ 819

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L L  CS L S+ + + NL  L  ++ SGC  L ++P  IG+L SL  L+L E +   +
Sbjct: 820 TLCLKLCSDLVSLPNSVVNLNYLSEIDCSGCCSLTEIPNNIGSLSSLRKLSLQESNVVNL 879

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWD 655
           P S+  LS L  L L  CKRL+ +P+LP   + + A  C S+  +  +S L   +    D
Sbjct: 880 PESIANLSNLKSLDLSFCKRLECIPQLPSSLNQLLAYDCPSVGRMMPNSRLELSAISDND 939

Query: 656 IFNF 659
           IF F
Sbjct: 940 IFIF 943



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 522 IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
           +E +PSSIG+LS+L  LDLT C  L++  S +     L++L+L GC  L+  P+ +   E
Sbjct: 734 LETIPSSIGSLSKLSKLDLTYCESLETFPSSIFK-LKLKKLDLHGCSMLKNFPDILEPAE 792

Query: 582 SLEYLNLAEKDFEKIPSSMK-QLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTS 636
           +  ++NL +   +++PSS++  L  L  L L+ C  L SLP     L   S I    C S
Sbjct: 793 TFVHINLTKTAIKELPSSLEYNLVALQTLCLKLCSDLVSLPNSVVNLNYLSEIDCSGCCS 852

Query: 637 LKTLSNS 643
           L  + N+
Sbjct: 853 LTEIPNN 859



 Score = 43.5 bits (101), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 40/172 (23%)

Query: 471 DIYQVLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEISCN-IEDLDLK------- 518
           D++ V NE   +    P  IN+   K L +   +  +  P +  N  E LD         
Sbjct: 610 DMFVVGNEKMRVQRATPYDINMSRNKRLRIVATAQNQSIPPLESNTFEPLDFVVLNKEPK 669

Query: 519 --------ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
                   E   E  PS   +L+ L  LDL++C  L                 L  C+  
Sbjct: 670 DNIQLLSLEVLREGSPSLFPSLNELCWLDLSHCDSL-----------------LRDCIM- 711

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +LP  + +L  LE L+L   ++ E IPSS+  LSKLS L L  C+ L++ P
Sbjct: 712 -ELPSSLQHLVGLEELSLCYCRELETIPSSIGSLSKLSKLDLTYCESLETFP 762


>gi|298228728|dbj|BAJ09394.1| TuMV resistance-like protein [Brassica rapa subsp. chinensis]
          Length = 829

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 240/717 (33%), Positives = 351/717 (48%), Gaps = 131/717 (18%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVF SF G DVR NF+SH+   L  + I+ FID+ + R   I P L  AI+GS+++IV+ 
Sbjct: 18  DVF-SFHGADVRKNFLSHVLIELKSKGIDVFIDNDIRRSKSIGPFLIDAIKGSRVAIVLL 76

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD--------------------- 115
           SE YASS WCLNELV+I++ + ++GQ V+P+FY VDPSD                     
Sbjct: 77  SEDYASSTWCLNELVEIMKCRREFGQTVMPIFYQVDPSDVKKQTGEFGKVFQKICKGKTE 136

Query: 116 ----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                           AG+  S  W        SE+ +IE     IS KL+   P    D
Sbjct: 137 EKIRRWKEALTEVANIAGFHSS-NW-------KSEAEMIEKIATKISNKLNLSVPCSYCD 188

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE---GSYFM 216
            LVG+ES + E+ S L     E   VGI G+ GIGKTTIA ++Y+    +F+   G  F+
Sbjct: 189 GLVGIESHMTEMRSLLSLDCDEVRKVGILGMAGIGKTTIARSLYNRHCQNFQRFDGCCFL 248

Query: 217 QN---------------------IRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTD 255
            N                     + DE+ +VG     H   + R L+  K L +  D  D
Sbjct: 249 SNEIDELKLQGIDQLQQKLLIKLLDDETLEVGASLGAHKVLKDRLLN--KKLFIVLDNVD 306

Query: 256 LKQIDLLIGRLDG--FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            KQI LLIG      +  GSR+IITTRD +LL       V   + V  L+  ++L LF  
Sbjct: 307 NKQISLLIGEAGKQLYRDGSRIIITTRDKKLLDK----VVDGTYVVPRLNGREALELFCS 362

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AFG ++P   F++LSN  + YA G+PLAL++LG  L       W+  +  L+  P  ++
Sbjct: 363 KAFGNHYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKEL 422

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           QK LK SY  LDD+++++FLD ACFF+      V + L +    AK  +  L  K LV I
Sbjct: 423 QKELKSSYKALDDDQKSVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVMI 482

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI-------------------YQ 474
           S ++I MHDLL  MG EI +++SI+  G+R RL + E +                   ++
Sbjct: 483 SYDRIEMHDLLHAMGKEIGKEKSIRKAGERRRLSNCELLLDILSLLFANSGSECLKGDFK 542

Query: 475 VLNENTSL---PTGINLDSLKELYLG----GCSNLKRFPEISCN-------IEDLDLKET 520
            LNE  ++   P   ++       LG    G  +  +F    C+       + D + + +
Sbjct: 543 ALNEIKAIKGFPAAFSM-------LGDDPCGDGDFLKFHGSHCSTQGDNRVVTDHEFQAS 595

Query: 521 AI-EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
            I    P ++ NL  L+ LDL N      +  +  + K L+ L+L      + +P EIG 
Sbjct: 596 KIVGPFPIAVTNLLDLMRLDLHN-----KLPGKF-DPKELKDLSLRWNHIKDVIPPEIGE 649

Query: 580 LESLEYLNLAEKDFE-KIPSSMKQLSKLSDLRLQNCKRLQSLPELP--CGSSIHARH 633
           LE L +L+L    F+ +IP   K+L+ L +LR +N + L     +P  CGS  + RH
Sbjct: 650 LERLRHLDLGFNSFKGEIP---KELAALPELRAKNLEELDLEGRIPAECGSLQNLRH 703



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 59/239 (24%)

Query: 423 SRLVGKSLVTISNNKITMH-DLLQEMGGEIVRQESIKDPGKRSRLW-HPEDIYQVLNENT 480
           S++VG   + ++N    M  DL  ++ G+   +E +KD   R   W H +D+        
Sbjct: 595 SKIVGPFPIAVTNLLDLMRLDLHNKLPGKFDPKE-LKDLSLR---WNHIKDV-------- 642

Query: 481 SLPTGIN-LDSLKELYLGGCS-------NLKRFPEISC-NIEDLDLKETAIEELPSSIGN 531
            +P  I  L+ L+ L LG  S        L   PE+   N+E+LDL+      +P+  G+
Sbjct: 643 -IPPEIGELERLRHLDLGFNSFKGEIPKELAALPELRAKNLEELDLEG----RIPAECGS 697

Query: 532 LSRLVDLDLTNCSGLKSVSSRLC----------NLKSLRRLNLSGCLK------------ 569
           L  L  LD  N   + +  +R C           +KSL+ L LSGC+K            
Sbjct: 698 LQNLRHLDAGNNHLVGN--TRDCIRFDGLFKGFKIKSLKNLILSGCIKAKDFHIISEEIV 755

Query: 570 ---LEK----LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
              LEK    +P  I ++  L +LNL    F  IP +  +L  L ++ ++    ++SLP
Sbjct: 756 YLHLEKFICNIPFAIAHIHKLIFLNLDHNQFLGIPDAFYKLKFLKEMYIEGKSGVESLP 814


>gi|357499375|ref|XP_003619976.1| Disease resistance-like protein [Medicago truncatula]
 gi|355494991|gb|AES76194.1| Disease resistance-like protein [Medicago truncatula]
          Length = 681

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 231/690 (33%), Positives = 339/690 (49%), Gaps = 135/690 (19%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R +F+ HL  ALC   I TFIDDK L+ G EI+PSL  AIE S I+I 
Sbjct: 17  YDVFLSFRGTDTRFHFIGHLYKALCDCGIRTFIDDKELHGGEEITPSLVKAIEDSGIAIP 76

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG------ 123
           +FS  YA+S +CL+ELV I++     G +++P+FY VDPS        Y   +G      
Sbjct: 77  VFSINYATSSFCLDELVHIVDCFKTKGHLILPIFYEVDPSHVRHQTGSYGAYIGNMERLR 136

Query: 124 -W----------------MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
            W                +G     + E  LI   V ++S K++   P    D  VG++S
Sbjct: 137 KWKIALNQAANLSGHHFNLGCLHNNSYEYELIGKMVQEVSNKINRP-PLHVADYPVGLQS 195

Query: 167 IIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
            + ++ S L  G  +    VGI+GIGGIGK+T+A AIY+ I   FE   F+ N+R+ + K
Sbjct: 196 RLLQVNSLLNIGYDDGVCMVGIYGIGGIGKSTLARAIYNLIGDQFESLCFLHNVRENATK 255

Query: 226 VGGLANIH--------------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
             GL N+                     +   ++RL + KV+++  D+ +LKQ+  +IG 
Sbjct: 256 -HGLQNLQEKLLSETVGLAIKLGHVSEGIPIIQQRLRQKKVILILDDVDELKQLQAIIGE 314

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            +    GS+VI+TTRD  LL  H   R+   + V  L   ++L LF   AF         
Sbjct: 315 PNWLGHGSKVIVTTRDKHLLSCHGIERI---YVVDGLKEEEALELFRWMAFK-------- 363

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
                     +N +   L+V+GS+L G    EWES + K +R+PH  +QK+L+VS+D LD
Sbjct: 364 ----------SNKIEPTLEVVGSHLFGKCIAEWESTLAKYERIPHGHVQKILRVSFDCLD 413

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNNKIT-MHDL 443
           +EEQ++FLD  C F G     V + L A      K  +  LV KSL+ I  + +  +HDL
Sbjct: 414 EEEQSVFLDITCCFNGCRLAEVEDKLHAHYGHCIKNHVGVLVNKSLIKIIRSTVVRLHDL 473

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCS--- 500
           +++MG EIVRQES+K+ G+R+RLW  +DI  VL ENT          ++ +YL G S   
Sbjct: 474 IEDMGKEIVRQESVKEAGERTRLWFDKDIVHVLKENTET------SKIEMIYLNGPSIEV 527

Query: 501 ----NLKRFPEISCNIEDLDLKETAI---------------------EELPSSIGNLSRL 535
               N K F ++  N++ L +K                         E +P ++  L  L
Sbjct: 528 LRDWNGKAFKKMK-NLKTLIIKSGHFSKGSRYFPSSLRVLEWQRYPSECIPFNVSCLPNL 586

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            ++  TNC  L +V + +  L  L  L+   C+KL   P                     
Sbjct: 587 ENISFTNCVNLITVHNSIGFLNKLEILSAQSCVKLTSFPP-------------------- 626

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
                 QL+ L  L L +CK L+S P++ C
Sbjct: 627 -----LQLTSLKILNLSHCKSLRSFPDILC 651


>gi|399920225|gb|AFP55572.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1076

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 234/687 (34%), Positives = 354/687 (51%), Gaps = 92/687 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F  +L   L R  I +F DD +L RG  ISP L +AIE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTGYLYHELQRRGIRSFRDDPQLERGTTISPKLLTAIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YASS WCL EL KILE   + G I+ P+FY VDPS                   
Sbjct: 78  VVLSPNYASSTWCLLELSKILECMEERGTIL-PIFYEVDPSHVRHQRGSFAEAFQEHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-SDLFPS----DNKDQL 161
                    G+  +L  +      TSE    E   + +I + L S + PS     + ++L
Sbjct: 137 FGEGNKEVEGWRDALTKVASLAGWTSEKYRYETELIREIVQALWSKVHPSLTVFGSSEKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+++ ++EI+  L   + +   +GIWG+GGIGKTT+   +Y  IS  FE   F+ N+R+
Sbjct: 197 VGMDAKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLGRLVYEKISHQFEVCIFLANVRE 256

Query: 222 ESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
            S+   GL ++                      +   +R +    VL+V  D+   +Q+ 
Sbjct: 257 ASKTTHGLVDLQKQILSQILKEENVQVWNVYSGITMIKRCVCNKAVLLVLDDVDQSEQLA 316

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           +L+G  D F   SR+IITTR+  +L  H    V   +E+K L+ +++L LFS  AF +  
Sbjct: 317 ILVGEKDCFGLRSRIIITTRNRHVLVTHG---VEKPYELKGLNEDEALQLFSWKAFTKCE 373

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   + EL    +  A G+PLAL++LGS+L   S + W SA  KLK+ P+  + ++LK+S
Sbjct: 374 PEEDYAELCKRFVTCAAGLPLALKILGSFLYKRSLDSWSSAFQKLKQTPNPTVFEILKIS 433

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
           +DGLD+ E+ IFLD ACF +      ++  +D+     +I  S L  KSL+TI S+N++ 
Sbjct: 434 FDGLDEMEKKIFLDIACFRRLYRNEFMIELVDSSDPCNRITRSVLAEKSLLTISSDNQVD 493

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI--NLDSLKELY 495
           +HDL+ EMG EIVRQE+ K+PG RSRL   + I+ V  +NT      GI  +LD L+E  
Sbjct: 494 VHDLIHEMGCEIVRQEN-KEPGGRSRLCLRDHIFHVFTKNTGTEAIEGILLHLDKLEE-- 550

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL---------------DL 540
                NL+ F ++ C ++ L +    +   P  + N  R ++                +L
Sbjct: 551 --ADWNLETFSKM-CKLKLLYIHNLRLSVGPKFLPNALRFLNWSWYPSKSLPPCFQPDEL 607

Query: 541 TNCSGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFE 594
           T  S + S    L N    L++L+ ++LS  + L + P+     NLE L        +  
Sbjct: 608 TELSLVHSNIDHLWNGKKYLRNLKSIDLSYSINLTRTPDFTVFPNLEKLVLEGCT--NLV 665

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           KI  S+  L +L     +NCK ++SLP
Sbjct: 666 KIHPSIALLKRLKLCNFRNCKSIKSLP 692



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 35/201 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSR-LV 536
           SLP+ +N++ L+   + GCS LK+ PE    +  +  L L  TA+E+LPSSI +LS  LV
Sbjct: 690 SLPSELNMEFLETFDISGCSKLKKIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLSESLV 749

Query: 537 DLDLTNC----------------------------SGLKSVSSRLCNLKSLRRLNLSGCL 568
           +LDL+                                L  + + L    SL  L L+ C 
Sbjct: 750 ELDLSGIVIREQPHSLFFKQNFRVSSFGLFPRKSPHPLIPLLASLKQFSSLTELKLNDCN 809

Query: 569 KLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
             E ++P +IG+L SL  L L   +F  +P+S+  LSKL  + ++NC RLQ LPELP   
Sbjct: 810 LCEGEIPNDIGSLSSLRKLELRGNNFVSLPASIHLLSKLEVITVENCTRLQQLPELPASD 869

Query: 628 SIHAR--HCTSLKTLSNSSTL 646
            I  +  +CTSL+   +   L
Sbjct: 870 YILVKTDNCTSLQVFPDPPDL 890



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 4/121 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK + L    NL R P+ +   N+E L L+  T + ++  SI  L RL   +  NC 
Sbjct: 627 LRNLKSIDLSYSINLTRTPDFTVFPNLEKLVLEGCTNLVKIHPSIALLKRLKLCNFRNCK 686

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            +KS+ S L N++ L   ++SGC KL+K+PE +G  + L  L L     EK+PSS++ LS
Sbjct: 687 SIKSLPSEL-NMEFLETFDISGCSKLKKIPEFVGQTKRLSKLCLGGTAVEKLPSSIEHLS 745

Query: 605 K 605
           +
Sbjct: 746 E 746


>gi|105922992|gb|ABF81449.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 806

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 186/509 (36%), Positives = 271/509 (53%), Gaps = 68/509 (13%)

Query: 6   SSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSS 64
           SS +   + KH VFLSFRG+D R  F  HL  AL +  I TF DD ++ RG+ I   +  
Sbjct: 9   SSSSRFSNCKHQVFLSFRGEDTRRKFTDHLYTALVQAGIHTFRDDDEIQRGHNIELEIQK 68

Query: 65  AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGW 124
           AI+ SKISI++FS  YA SRWCL+ELV I+E K     IV+PVFY VDPS          
Sbjct: 69  AIQQSKISIIVFSIDYARSRWCLDELVMIMERKRTTNSIVLPVFYDVDPSQV-----RNQ 123

Query: 125 MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIES----QLLSGST 180
            G F     E            K+  +       +++ G    +KE+       L  GS 
Sbjct: 124 TGSFAAAFVEH----------EKRFKE-----EMERVNGWRIALKEVADLGGMVLGDGSH 168

Query: 181 EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRR 240
                 ++GIGG+GKT IA  +Y+     FEG  F+ N R+ S++  GL  +    +R+ 
Sbjct: 169 SAAIALLYGIGGVGKTAIAKNVYNQNFYKFEGKSFLSNFRERSKEFKGLVCL----QRQL 224

Query: 241 LSRM-------------------------KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
           LS +                         + LIV  D+ +  Q + ++G  +    GS++
Sbjct: 225 LSDILKKSVDEINDVDEGILKIKDVICCRRTLIVLDDVEERDQFNAIVGMQNWLCKGSKI 284

Query: 276 IITTRDVQLL-KNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIK 334
           I+TTR+  LL  N +  +     +V+ L    SL LFS +AFGQ +P  GF+E S  ++ 
Sbjct: 285 IVTTRNKGLLSANDKWVKC----KVEPLDNGKSLELFSWHAFGQAYPVEGFVEDSWKIVN 340

Query: 335 YANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQ-NIFL 393
           + NG+PLAL+V+GS L G S E WESA+++++ +P+ ++QK+L++SYD LDDE Q N+FL
Sbjct: 341 HCNGLPLALRVIGSSLSGKSREVWESALHEMEVIPNCEVQKILRISYDSLDDEYQKNLFL 400

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI----SNNKITMHDLLQEMGG 449
           D ACFF G D    +  LD     A+  I  L+ + LV I    S+ ++ MH L+++MG 
Sbjct: 401 DIACFFNGMDYNYAVRILDGLGIGARFRIDNLIDRCLVEIVEINSDKRLWMHQLVRDMGR 460

Query: 450 EIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
           EI RQES     +  R+WH  + + VL E
Sbjct: 461 EISRQES----PQCQRIWHHMEAFTVLKE 485


>gi|449483054|ref|XP_004156480.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 539

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 200/533 (37%), Positives = 297/533 (55%), Gaps = 69/533 (12%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSL 62
           SSSS   +P    DVFLSFRG+D R NF SHL+ ALC++ I  FIDD KL RG EI  SL
Sbjct: 7   SSSSHLRLPF---DVFLSFRGEDTRSNFTSHLHMALCQKGINVFIDDDKLPRGEEICTSL 63

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDA----- 116
             AIE SKISIVI SE YASS WCL+EL+KI+  +K+   Q+V PVFY VDPS       
Sbjct: 64  LKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVDPSHVRRQRG 123

Query: 117 ------------------GYCPSLGW---MGIFDIPT--SESVLIEGNVNDISKKLSDLF 153
                              +  +L +   M  +D+    +E+ LI+  V ++ KKL +  
Sbjct: 124 VFGEEFAKLQVRFSNKMQAWSEALTFISTMSGWDLKNYENEASLIQIIVQEVRKKLKNSA 183

Query: 154 PS--DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            +  D     VG++  +  +   ++S   E   VG++GIGG+GKTT+A A+Y+ IS  FE
Sbjct: 184 TTELDVAKYPVGIDIQVSNLLPHVMS--NEITMVGLYGIGGMGKTTLAKALYNKISDDFE 241

Query: 212 GSYFMQNIRDESEKVGGLAN---------------------IHLNFERRRLSRMKVLIVF 250
           G  F+ N+R+ S +  GL                       I ++  R RL   K++++ 
Sbjct: 242 GCCFLANVREASNQYWGLVELQKTLIREILMDDSIKVSNVGIGISIIRDRLCSKKIILIL 301

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+   +Q+  L G  D F  GS+VI TTR+ QLL +H G  +  +  V  L+  + L L
Sbjct: 302 DDIDTHEQLQALAGGHDWFGHGSKVIATTRNKQLLASH-GFNI--LKRVNGLNAIEGLEL 358

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMP 369
           FS +AF  +HP++ +L++S   + Y  G+PLAL+VLGS+L  + ++ ++E  +++ +   
Sbjct: 359 FSWHAFKNSHPSSDYLDVSKRAVHYCKGLPLALEVLGSFLNSIDDQSKFERILDEYEN-S 417

Query: 370 HMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC--RFSAKIGISRL 425
           ++D  IQ +L++SYD L+ + + IFL  +C F   D+  V   L  C  RF  ++GI +L
Sbjct: 418 YLDKGIQDILRISYDELEQDVKEIFLYISCCFVHEDKNEVQMMLKECDSRFRLEMGIKKL 477

Query: 426 VGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
              SL+TI   N++ MHDL+Q+MG  I   E+  +  KR RL   +D+  VLN
Sbjct: 478 TDLSLLTIDKFNRVEMHDLIQQMGHTIHLLET-SNSHKRKRLLFEKDVMDVLN 529


>gi|297811961|ref|XP_002873864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319701|gb|EFH50123.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 788

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 241/732 (32%), Positives = 362/732 (49%), Gaps = 119/732 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G+DVR NF+SHL   L    I  F D  + R   I P L  AI  S+ISIV
Sbjct: 18  RYHVFPSFCGEDVRKNFLSHLQKELQLRGINAFKDHGIKRSRSIWPELKQAIWESRISIV 77

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           + S  YA S WCL+EL++I+E +   GQ ++ VFY VDPSD                   
Sbjct: 78  VLSSNYAGSSWCLDELLEIMECREAVGQTLLTVFYEVDPSDVRKQTGAFGKVFEKTCLGR 137

Query: 116 ------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDN 157
                             +GYC S  W        +E+ +IE  V D+S++L+   PS +
Sbjct: 138 TVEETQRWKQALTDVANVSGYC-SEKW-------DNEASMIEKIVADVSEELNCCTPSKD 189

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS---HFEGSY 214
            D LVG+E+ + ++ S L   S +   +GIWG  GIGKTTIA A+Y+ +SS    F+ + 
Sbjct: 190 FDDLVGLEAHVAKLNSMLCLQSNDVRMIGIWGPIGIGKTTIARALYNQLSSDGDEFQQNL 249

Query: 215 FMQNIRDESE--KVGGL-------------------ANI-HLNFERRRLSRMKVLIVFYD 252
           FM+N++  S+  K+ G                     NI HL   + RL   K LIV  D
Sbjct: 250 FMENVKRSSKRNKLDGYRLKLHLQERFLSEMFNQRNINISHLGVAQERLKNQKALIVLDD 309

Query: 253 LTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           + D++Q+  L  +   F  G+RVI+ T D QLLK H    + HV++V   S +++  +F 
Sbjct: 310 VDDVEQLHALADQTQWFGNGTRVIVITEDKQLLKAHG---IDHVYDVCLPSKDEAFHIFC 366

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
           R AFG+     G+ +++  V K A  +PL L +LG+ L+GM ++EW +A+ +L+   +  
Sbjct: 367 RFAFGKTSAPEGYYDVAVEVAKLAGDLPLGLSILGASLRGMRKDEWINALPRLRTSLNGK 426

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           I+K+L   YDGLD++++ +FL  AC F G     V   L      A+ G+  L  +SL+ 
Sbjct: 427 IEKLLGACYDGLDEKDKALFLHIACLFNGEKVDRVKELLAISALDAEFGLKVLNDRSLIH 486

Query: 433 I-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           I ++  I MH LLQ+MG EI R + + DPGK   +    +I  VL + T   T  GI+LD
Sbjct: 487 ICADGYIVMHCLLQQMGKEITRGQCLHDPGKGKFIVDALEISDVLADETGTKTVLGISLD 546

Query: 490 --------SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
                    + E       NL+ F  +  +I D    + A  +LP  +  L R + L   
Sbjct: 547 MSEIDGQVYISEKAFEKMPNLQ-FLRLYNSIPD----KAAEFDLPHGLDYLPRKLRLLHW 601

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA------------ 589
           +   +K + S+    + L  L +    KLEKL E I  L SL+Y++L+            
Sbjct: 602 DSYPIKCMPSKF-RPEFLVELTMRDS-KLEKLWEGIQPLTSLKYMDLSASTNIGDIPNLS 659

Query: 590 -EKDFEK-----------IPSS-MKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARH 633
             K+ EK           +PSS ++ L+KL  L +  C +L++LP    L   S ++ R 
Sbjct: 660 RAKNLEKLYLRFCENLVTVPSSALQNLNKLKVLDMSCCIKLKTLPTNINLESLSVLNLRG 719

Query: 634 CTSLKTLSNSST 645
           C+ LK     ST
Sbjct: 720 CSKLKRFPFIST 731



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 8/150 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLK--ETAIEELPSSIGNLSRLVDLDLTNC 543
           L SLK + L   +N+   P +S   N+E L L+  E  +    S++ NL++L  LD++ C
Sbjct: 638 LTSLKYMDLSASTNIGDIPNLSRAKNLEKLYLRFCENLVTVPSSALQNLNKLKVLDMSCC 697

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             LK++ + + NL+SL  LNL GC KL++ P  I     +++++L E   EK+PS +K  
Sbjct: 698 IKLKTLPTNI-NLESLSVLNLRGCSKLKRFPF-IST--QIQFMSLGETAIEKVPSQIKLC 753

Query: 604 SKLSDLRLQNCKRLQSLPELPCGSSIHARH 633
           S+L  L +  CK L+++P  P    I   H
Sbjct: 754 SRLVSLEMAGCKNLRTIPPFPASIEIVDYH 783



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 48/69 (69%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT INL+SL  L L GCS LKRFP IS  I+ + L ETAIE++PS I   SRLV L++
Sbjct: 702 TLPTNINLESLSVLNLRGCSKLKRFPFISTQIQFMSLGETAIEKVPSQIKLCSRLVSLEM 761

Query: 541 TNCSGLKSV 549
             C  L+++
Sbjct: 762 AGCKNLRTI 770


>gi|297794599|ref|XP_002865184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311019|gb|EFH41443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1750

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 219/653 (33%), Positives = 334/653 (51%), Gaps = 92/653 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SFRG DVR  F+SH    L  + I+ F D ++ R + I+P L  AI GS+I++V+
Sbjct: 9   YDVFPSFRGADVRKTFLSHFLKELDLKSIKPFKDSEIERSHSIAPELIQAIRGSRIAVVV 68

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG--------- 126
           FSE YA+S+WCL+ELV+IL+ K + GQIV+P+FY +DP        LG  G         
Sbjct: 69  FSENYATSKWCLDELVEILKCKEELGQIVIPIFYDLDPFHVR--KQLGKFGEAFKNTCLN 126

Query: 127 ------------IFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                       + D+            +E  +IE  V+DI  KL++  PS + D  VG+
Sbjct: 127 KTKNEIQLWRQALNDVANLLGYHSHTCNNEPKMIEDIVSDIFHKLNET-PSKDFDNFVGI 185

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM------QN 218
            + I E+   L     E   VGIWG  GIGKTTIA A+++ ++ HF+G  F+      ++
Sbjct: 186 NNHIAEMNLLLCLEYEEARMVGIWGPSGIGKTTIARALFNLLARHFQGKAFIDRAFVSKS 245

Query: 219 IRDESEKVGGLANI--------------------HLNFERRRLSRMKVLIVFYDLTDLKQ 258
           I        G  N+                    HL   R RL   KVLI+  DL DL  
Sbjct: 246 IEGYRRAKTGDHNMKLSLQGSFLSEILGKNIKIEHLGALRERLKHRKVLIIIDDLDDLVV 305

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L G+   F  GSR+I+ T+D  LL+ H    + H+++V   S   +L +F R+AF Q
Sbjct: 306 LEALAGQTQWFGSGSRIIVVTKDKHLLEAHG---IDHIYKVGFPSEKQALEMFCRSAFSQ 362

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           N P  GF+EL++ V  ++ G+PL L +LG  +KG ++E+W   + +L++ P+ DI + L+
Sbjct: 363 NSPPDGFMELASEVAAFSGGLPLGLVILGKVVKGRNKEDWIDMLPRLRKSPNRDIVETLR 422

Query: 379 VSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI---- 433
            SYD LD EE + I    AC F G D   +   L        IG+  L  KSL+ +    
Sbjct: 423 FSYDELDSEEDKAILRHIACLFNGVDVNNIKMMLSDSELDVNIGLKNLADKSLINVVPSW 482

Query: 434 -SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINL 488
            + N + MH L+QEMG ++VR++S K PGKR  L + +DI  VL   T     L   +++
Sbjct: 483 NNTNIVEMHCLVQEMGRDVVRKQSDK-PGKREFLMNSKDICDVLRGCTGTEKVLGISLDI 541

Query: 489 DSLKELYL-----GGCSNLK--RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           D +K++ +      G +NL+  +F + S     L+ K+    +LP    +    + L   
Sbjct: 542 DEVKKVRIHKNAFDGMTNLRFLKFYKSS-----LERKKGFRWDLPERFDDFPDKLKLLSW 596

Query: 542 NCSGLKSVSSRLCN--LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
               ++ + S  C   L  LR  N     KLEKL E +  L  L++++ +E +
Sbjct: 597 PGYPMRCMLSNFCPEYLVELRMPN----SKLEKLWEGVELLTCLKHMDFSESE 645



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 221/706 (31%), Positives = 348/706 (49%), Gaps = 114/706 (16%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
            +DVF SFRG DVR  F+SH    L  + I+ F D ++ R + I+P L  AI GS+I++V+
Sbjct: 755  YDVFPSFRGADVRKTFLSHFLKELDLKSIKPFKDSEIERSHSIAPELIQAIRGSRIAVVV 814

Query: 76   FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG--------- 126
            FSE YA+S+WCL+ELV+IL+ K + GQIV+P+FY +DP        LG  G         
Sbjct: 815  FSENYATSKWCLDELVEILKCKEELGQIVIPIFYALDPFHVR--KQLGKFGEAFKKTCLN 872

Query: 127  ------------IFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                        + D+            SE+ +IE  V+DI  KL++  PS + D  VG+
Sbjct: 873  KTEDERQLWRQALTDVANLLGYHSHTCNSEAKMIEDIVSDIFHKLNET-PSKDFDNFVGI 931

Query: 165  ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM-------- 216
             + I E+   L   S E   VGIWG  GIGKTTIA A+++ +S HF+G  F+        
Sbjct: 932  NNHIAEMNLLLCLESEEARMVGIWGPSGIGKTTIARALFNLLSRHFQGKAFIDRAFVSKS 991

Query: 217  -----------QNIRDE------SEKVGGLANI-HLNFERRRLSRMKVLIVFYDLTDLKQ 258
                        N++        SE +G    I HL   R RL   KVLI+  DL DL  
Sbjct: 992  IEGYRGAKTGDHNMKLSLQGSFLSEILGKNIKIEHLGALRERLKHRKVLIIIDDLDDLVV 1051

Query: 259  IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
            ++ L G+   F  GSR+I+ T+D +LL+ H    V H+++V   S   +L +F R+AF Q
Sbjct: 1052 LEALAGQTQWFGSGSRIIVVTKDKRLLEAH---GVHHIYKVCFPSEKQALEMFCRSAFTQ 1108

Query: 319  NHPAAGFLELSNIVIKYANGVPLALQVLGSYLK---GMSEEEWESAVNKLKRMPHMDIQK 375
            + P  GF+EL++ V   +  +PL L +LG   +   G+S +     ++++K++      +
Sbjct: 1109 SSPPDGFMELASEVAACSGRLPLGLVILGKGTEKVLGISLD-----IDEVKKV------R 1157

Query: 376  VLKVSYDGLDDEEQNIFLDTACFFKGNDQY-LVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            + K ++DG+ +     F  ++   K   ++ L   F D   F  K+ +    G  +  + 
Sbjct: 1158 IHKNAFDGMTNLRFLKFYKSSLERKKGFRWDLPERFND---FPDKLKLLSWPGYPMRCMP 1214

Query: 435  NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN-----------ENTSLP 483
            +N    + +   M              K  +LW   ++   L            E   L 
Sbjct: 1215 SNFCPEYLVELRMPN-----------SKVEKLWEGVELLTCLKHMDFSESENLREIPDLS 1263

Query: 484  TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
            T  NLD+   L L GCS+L    +IS NI  L+L +T+I + PS + +L +LV+L +   
Sbjct: 1264 TATNLDT---LVLNGCSSLVELHDISRNISKLNLSQTSIVKFPSKL-HLEKLVELYMGQT 1319

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD--FEKIPSSMK 601
               +     +  L SL+++  SGC  L++LP ++     LE LNL++     E   S+++
Sbjct: 1320 KN-ERFWEGVQPLPSLKKIVFSGCANLKELP-DLSMATRLETLNLSDCSSLAEVTLSTIQ 1377

Query: 602  QLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTSLKTLSNSS 644
             L+KL  L +  C  L++LPE   LP    ++   C+ L++  N S
Sbjct: 1378 NLNKLMILDMTRCSSLETLPEGINLPSLYRLNLNGCSRLRSFPNIS 1423



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 9/188 (4%)

Query: 438  ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN-LDSLKELYL 496
            + +HD+ + +    + Q SI     +  L    ++Y    +N     G+  L SLK++  
Sbjct: 1280 VELHDISRNISKLNLSQTSIVKFPSKLHLEKLVELYMGQTKNERFWEGVQPLPSLKKIVF 1339

Query: 497  GGCSNLKRFPEIS--CNIEDLDLKETA--IEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
             GC+NLK  P++S    +E L+L + +   E   S+I NL++L+ LD+T CS L+++   
Sbjct: 1340 SGCANLKELPDLSMATRLETLNLSDCSSLAEVTLSTIQNLNKLMILDMTRCSSLETLPEG 1399

Query: 553  LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
            + NL SL RLNL+GC +L   P  I N  ++  LNL +   E++P  ++    L  L + 
Sbjct: 1400 I-NLPSLYRLNLNGCSRLRSFP-NISN--NIAVLNLNQTGVEEVPQWIENFFSLELLEMW 1455

Query: 613  NCKRLQSL 620
             C +L+ +
Sbjct: 1456 ECNQLKCI 1463



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 2/99 (2%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            +LP GINL SL  L L GCS L+ FP IS NI  L+L +T +EE+P  I N   L  L++
Sbjct: 1395 TLPEGINLPSLYRLNLNGCSRLRSFPNISNNIAVLNLNQTGVEEVPQWIENFFSLELLEM 1454

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL--PEEI 577
              C+ LK +S  +  L +L ++  S C +L ++  PEE+
Sbjct: 1455 WECNQLKCISPSIFTLDNLNKVAFSDCEQLTEVIWPEEV 1493


>gi|334188321|ref|NP_001190516.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008726|gb|AED96109.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1181

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 229/710 (32%), Positives = 341/710 (48%), Gaps = 132/710 (18%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSS         +DVF SF G+DVR +F+SHL   L R+ I TFID+ + R + I+P
Sbjct: 1   MASSSSR-----SWTYDVFPSFSGEDVRKSFLSHLLKKLHRKSINTFIDNNIERSHAIAP 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L SAI  S ISIV+FS+ YASS WCLNELV+I +   +  QIV+P+FY VDPSD     
Sbjct: 56  DLLSAINNSMISIVVFSKKYASSTWCLNELVEIHKCYKELTQIVIPIFYEVDPSDVRKQT 115

Query: 117 ------------GYCPSLG--WMGIFDIPTS-----------ESVLIEGNVNDISKKLSD 151
                       G    +   W+   +   S           E+ +IE    D+  KL  
Sbjct: 116 REFGEFFKVTCVGKTEDVKQQWIEALEEVASIAGHDSKNWPNEANMIEHIAKDVLNKLIA 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
              S+    LVG+E+ +K ++S L   S E   VGI G  GI +  +             
Sbjct: 176 TSSSNCFGDLVGIEAHLKAVKSILCLESEEARMVGILGPSGIDQKDL------------- 222

Query: 212 GSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVP 271
                        K+  L  +     ++RL   KVLIV  D+ +L+ +  L+G+   F P
Sbjct: 223 -------------KISQLGVV-----KQRLKHKKVLIVLDDVDNLELLKTLVGQTGWFGP 264

Query: 272 GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNI 331
           GSR+I+TT+D  LLK+H+   + H++EV   S   +L +  R+AF +N P  GF++L+N 
Sbjct: 265 GSRIIVTTQDRILLKSHK---IDHIYEVGYPSRKLALRILCRSAFDRNSPPDGFMQLANE 321

Query: 332 VIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR-MPHMDIQKVLKVSYDGLDDEEQN 390
           V +    +PLAL ++GS LKG  +EEW   +  L+  +   +I K L+VSYD L    Q 
Sbjct: 322 VTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDRLHGNYQE 381

Query: 391 IFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKITMHDLLQEMG 448
           IFL  AC         +++ L     +A IG+  L  KSL+ IS  +  + MH LLQ++G
Sbjct: 382 IFLYIACLLNCCGVEYIISMLGD---NAIIGLKILAEKSLIHISPLDKTVEMHSLLQKLG 438

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLK--------ELYLGG 498
            +IVR ES  +PGKR  L   EDI  V  +NT   T  GI+L++L+        +    G
Sbjct: 439 RKIVRDESFGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSVDDKSFQG 498

Query: 499 CSNLK------------------------------------RFPEISC--------NIED 514
             NL+                                    +FP + C         + +
Sbjct: 499 MHNLQFLKVFENWRRGSGEGILSLPQGLNSLPRKLRLLHWYKFP-LRCMPSNFKAEYLVN 557

Query: 515 LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           L++  + +E L      L  L  +DL+    LK +   L    +L  ++L  C  L  LP
Sbjct: 558 LEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIPD-LSYAVNLEEMDLCSCKSLVTLP 616

Query: 575 EEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             + NL+ L  L ++   + E +P+ +  L  L  L L++C +L+S P++
Sbjct: 617 SSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQI 665



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT +NL+SL  L L GCS L  FP+IS NIE L L +TAIEE+PS I +   L  L +
Sbjct: 798 ALPTDVNLESLHTLDLSGCSKLTTFPKISRNIERLLLDDTAIEEVPSWIDDFFELTTLSM 857

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             C  L+++S+ +C LK +   N S C +L + 
Sbjct: 858 KGCKRLRNISTSICELKCIEVANFSDCERLTEF 890



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 28/158 (17%)

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           DL L E  ++E P+ +  ++ L  LDL  C  L +V S + +L  L  LN+  C  LE L
Sbjct: 742 DLSLSE-KLKEFPN-LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEAL 799

Query: 574 PEEIGNLESLEYLNLA---------------------EKDFEKIPSSMKQLSKLSDLRLQ 612
           P ++ NLESL  L+L+                     +   E++PS +    +L+ L ++
Sbjct: 800 PTDV-NLESLHTLDLSGCSKLTTFPKISRNIERLLLDDTAIEEVPSWIDDFFELTTLSMK 858

Query: 613 NCKRLQ----SLPELPCGSSIHARHCTSLKTLSNSSTL 646
            CKRL+    S+ EL C    +   C  L    ++S +
Sbjct: 859 GCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMV 896



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 25/140 (17%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            L SLK++ L    NLK  P++S   N+E++DL    ++  LPSS+ NL +L  L +++C
Sbjct: 574 QLGSLKKMDLSKSENLKEIPDLSYAVNLEEMDLCSCKSLVTLPSSVRNLDKLRVLRMSSC 633

Query: 544 SGLKSVSSRLCNLKSLRRL---------------------NLSGCLKLEKLPEEIGNLES 582
           S ++ + + L NL+SL  L                     NLSG    E+    I N+  
Sbjct: 634 SNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNLSGTAIDEESSLWIENMSR 692

Query: 583 LEYLNLAEKDFEKIPSSMKQ 602
           L +L       + +PS+ +Q
Sbjct: 693 LTHLRWDFCPLKSLPSNFRQ 712


>gi|224133148|ref|XP_002321494.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222868490|gb|EEF05621.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 538

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 185/534 (34%), Positives = 296/534 (55%), Gaps = 74/534 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           ++SS +++ +    + DVFLSFRG+D RH F  +L  +L ++ I  F+DD  +N+G+EI+
Sbjct: 9   VSSSPAALRL----RWDVFLSFRGEDTRHGFTKNLYDSLSKQDIRVFLDDSGMNQGDEIA 64

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P+L  AIE S +SI+I S  YA+S WCL EL +I E +    ++++PVFY VDPS     
Sbjct: 65  PTLMEAIEDSALSIIILSPRYANSHWCLEELARICELR----RLILPVFYQVDPSHVRRQ 120

Query: 115 ----DAGYCPSLGWMG--------------------IFDIPTSESVLIEGNVNDISKKLS 150
               +  +   +   G                    +FD   SE  LI    N +  +L 
Sbjct: 121 KGPLEQDFMNHMERFGEEKVGKWREAMYKVGGISGFVFDT-RSEDQLIRRLGNRVMTELR 179

Query: 151 DLFPSDNKDQLVGVESIIKEIESQLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
              P       VG++S +++++ + +   S     +G+ G+GGIGKTT+A+A+++ +  H
Sbjct: 180 KT-PVGIATYTVGLDSRVEDLKKRFIDDKSNRVQVLGLHGMGGIGKTTLATALFNKLVGH 238

Query: 210 FEGSYFMQNIRDESEKVGGLANIHLNFERRRLS---------------------RMKVLI 248
           FE   F+ N++D S++ GGL  +  N   R LS                       +VLI
Sbjct: 239 FESRSFILNVKDISKEDGGLVKLQ-NKLLRDLSPNWPLVNNIDKGVAAIKMLVHEKRVLI 297

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  D+ D+ Q++ L+G    F  GSRVI+TTR+  +L  H    V   +EV+EL   ++L
Sbjct: 298 VLDDVDDVSQLNALVGNRSWFGEGSRVIVTTRNKAVLAEH---LVNEFYEVRELGDPEAL 354

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL---KGMSEEEWESAVNKL 365
            LFS +A  ++ P   ++ +S  ++    G+PLAL+V GS L   +G++   WE A+ KL
Sbjct: 355 QLFSYHALRKDKPTEEYMNISKEIVSLTGGLPLALEVFGSTLFNERGLN--RWEDALKKL 412

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTAC-FFK-GNDQYLVMNFLDACRFSAKIGIS 423
           +R+   ++Q VL++SYD LD++ +++FLD AC FFK G  +   ++ L  C FSA+  I 
Sbjct: 413 QRIRPHNLQDVLRISYDELDEDGKHVFLDIACLFFKMGMKREEAIDILKGCGFSAETVIR 472

Query: 424 RLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
            L  K L+ I  ++++ MHD L++MG +IV+ E++ DPG RSRLW   +I   L
Sbjct: 473 VLTSKCLIKIREDDELWMHDQLRDMGRQIVQHENLADPGGRSRLWDRGEIMSTL 526


>gi|356548851|ref|XP_003542812.1| PREDICTED: TMV resistance protein N-like [Glycine max]
 gi|356548853|ref|XP_003542813.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 560

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 205/528 (38%), Positives = 286/528 (54%), Gaps = 61/528 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R +F  +L   L +  I TFI D     G EI  SLS AIE S++ ++
Sbjct: 14  YDVFLSFRGEDTRRSFTGNLYNCLEKRGIHTFIGDYDFESGEEIKASLSEAIEHSRVFVI 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSLG------ 123
           +FSE YASS WCL+ LV+IL+      + V+PVF+ V+PS        Y  +L       
Sbjct: 74  VFSENYASSSWCLDGLVRILDFTEDNHRPVIPVFFDVEPSHVRHQKGIYGEALAMHERRL 133

Query: 124 ---------WMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                    W        +            E  LIE  V DIS K+    P    D+ V
Sbjct: 134 NPESYKVMKWRNALRQAANLSGYAFKHGDGYEYKLIEKIVEDISNKIKISRPV--VDRPV 191

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G+E  + E++  L + S    + +GI GIGGIGKTT+A A+Y + + HF+ S F+ N+R+
Sbjct: 192 GLEYRMLEVDWLLDATSLAGVHMIGICGIGGIGKTTLARAVYHSAAGHFDTSCFLGNVRE 251

Query: 222 ESEKVGGLA-------------NIHL-------NFERRRLSRMKVLIVFYDLTDLKQIDL 261
            + K G +              NI L       +  ++ L R ++L+V  D+ +L  +  
Sbjct: 252 NAMKHGLVHLQQTLLAEIFRENNIRLTSVEQGISLIKKMLPRKRLLLVLDDVCELDDLRA 311

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G  D F PGSRVIITTRD  LLK H    V  V+EV+ L+  ++L L    AF  +  
Sbjct: 312 LVGSPDWFGPGSRVIITTRDRHLLKAHG---VDKVYEVEVLANGEALELLCWKAFRTDRV 368

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              F+   N  I +A+G+PLAL+++GS L G   EEWES +++ ++ P  DI   LK+S+
Sbjct: 369 HPDFINKLNRAITFASGIPLALELIGSSLYGRGIEEWESTLDQYEKNPPRDIHMALKISF 428

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGKSLVTI-SNNKIT 439
           D L   E+ +FLD ACFF G +   + + L A      K  I  LV KSL+ I  + ++ 
Sbjct: 429 DALGYLEKEVFLDIACFFNGFELAEIEHILGAHHGCCLKFHIGALVEKSLIMIDEHGRVQ 488

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGIN 487
           MHDL+Q+MG EIVRQES + PGKRSRLW  EDI  VL +NT   T IN
Sbjct: 489 MHDLIQQMGREIVRQESPEHPGKRSRLWSTEDIVHVLEDNTVSKTEIN 536


>gi|227438229|gb|ACP30604.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1196

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 225/738 (30%), Positives = 351/738 (47%), Gaps = 123/738 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VFLSFRG+DVR  F+SH+      + I  FID+++ RG  + P L  AI  S++ +V+
Sbjct: 17  YHVFLSFRGEDVRKGFLSHVLKEFKSKGINVFIDNEIKRGESVGPELVKAIRHSRVGVVL 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------GYC 119
            S  YASS WCL+ELV+I++ + + GQ V+ +FY VDPS+                 G  
Sbjct: 77  LSRNYASSSWCLDELVEIMKCREEVGQTVMTIFYNVDPSEVRKQTGDFGKAFDETCVGRT 136

Query: 120 PSL--GWMGIFDIPTSESVLIEGN-------VNDISKKLSDLF---PSDNKDQLVGVESI 167
             +   W    +   S +     N       +N ++ K+  +    PS + D  VG+E+ 
Sbjct: 137 EEVKRAWRQALNDVASIAGYDASNCDNEADLINKVASKVMAVLGFTPSKDFDDFVGIEAR 196

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK-V 226
           I EI+S+L+  S E   +GI+G  GIGKTT A  +Y+ +S +F+ + F++NIR   EK  
Sbjct: 197 IMEIKSKLILQSEEVKVIGIFGPAGIGKTTTARVLYNQLSPYFQFNTFLKNIRGSYEKPC 256

Query: 227 GGLANIHLNFER--------------RRLSRM-------KVLIVFYDLTDLKQIDLLIGR 265
           G   ++ LNF++              R L R        KVL+V  ++ +  Q++ +  +
Sbjct: 257 GNDYDLKLNFQKSMLCQIFNKEDIEVRHLGRAQEMLSDKKVLVVLDEVDNWWQLEEMAKQ 316

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
                PGS +IITT D +L K   G  + H++E+K  +  +SL +F + AFGQ  P  GF
Sbjct: 317 PGWVGPGSIIIITTEDRKLFKA-LGLGIDHIYEMKYPTSKESLQIFCQYAFGQKSPDQGF 375

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
             L+  V   A  +PL L+V+GSYL+GMS + W  A+  L+     +I+  L+ SY+ L 
Sbjct: 376 ESLAREVTWLAGDLPLGLRVMGSYLRGMSRDGWIEALPWLRSTLDREIESTLRFSYNALR 435

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQ 445
           D E+ +FL  AC F G    + ++   +C    +I  S+   K LV +         L +
Sbjct: 436 DNERTLFLHLACLFAG----IKVDRFKSCPL--RIWPSKFSCKFLVELIMQYSKFEMLWK 489

Query: 446 EMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGI---------------NLDS 490
             G + +    I D      L    D    L+E TSL                   N   
Sbjct: 490 --GIKPLPCLKILDLSSSQNLKKIPD----LSEATSLEVLCLHKCKSLLELTSSVGNATK 543

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L  L + GC N+K FP +S +I +L+L ET I E+P  I +L RL  L +  C  LK+VS
Sbjct: 544 LYRLDIRGCRNIKDFPNVSDSILELELCETGITEVPPWIESLYRLRKLIMCGCEQLKTVS 603

Query: 551 SRLCNLKSLRRLNLSG------------------------CLKLEKLPE--------EIG 578
             +  L++L  L+L+                           ++E  P+           
Sbjct: 604 PNISKLENLEFLHLTNYDLCDAGDHYNEDNEEIYYNENLFAARIEWGPDFKRSWRLRSDL 663

Query: 579 NLESLEYLNLAEKDF------------EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
           ++  +  ++L EK              + IP  +++LS L  L ++ C+RLQ+LP LP  
Sbjct: 664 DIHYILQISLPEKALTSSLHLRSFNGMKTIPECIRRLSGLIKLDVKECRRLQALPSLPDS 723

Query: 627 -SSIHARHCTSLKTLSNS 643
              I A  C SLK + +S
Sbjct: 724 LQFIDAEGCHSLKRIESS 741


>gi|297837791|ref|XP_002886777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332618|gb|EFH63036.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1023

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 230/695 (33%), Positives = 343/695 (49%), Gaps = 98/695 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +D+F SFRG+DVR NFV H    L R+ I  F D+++ R   + P L  AI  S+I++V+
Sbjct: 17  YDIFPSFRGEDVRKNFVCHFIKELDRKLITAFKDNQIERSRSLDPELKQAIRDSRIAVVV 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GYCPS-- 121
           FS+ YASS WCL+EL++I+  K +YGQ+V+P+FY +DPS                C    
Sbjct: 77  FSKNYASSSWCLDELLEIVRCKKEYGQLVIPIFYRLDPSHVRKQTGEFGKIFEKTCQHKT 136

Query: 122 -----------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                            LG+  +     +E+ +IE   ND+  KL ++ PS + D  VG+
Sbjct: 137 KQVQNRWSRALSHVSNILGYHSV--TWENEAKMIEEITNDVLGKL-NITPSKDFDDFVGM 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM-QNIRDES 223
           E  I E+ S+L   S E   VGIWG  GIGKTTIA A+++ ++ HF GS F+ ++   +S
Sbjct: 194 EGHIAEMSSRLCLESEEVRMVGIWGPSGIGKTTIARALFNRLARHFRGSIFIDRSFLCKS 253

Query: 224 EKVGGLANI--------------------------HLNFERRRLSRMKVLIVFYDLTDLK 257
            K+   AN                           HL   R RL   KVLI+  DL D  
Sbjct: 254 TKIYSKANPDDYNMRLHLQSNFLPEILGQKHIRIDHLGAVRERLKHQKVLILLDDLDDQV 313

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
            +D L+G+   F  GSR+I+ T++  LL+ H    +   +EV   S   +L +FSR AF 
Sbjct: 314 VLDTLVGQTQWFGRGSRIIVITKNKHLLRAH---GICSFYEVGLPSDQLALEMFSRYAFR 370

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           QN P  GF+E S  V K    +PL L +LGSYL+G  +E+W   +++L++  +  I++ L
Sbjct: 371 QNCPLPGFIEFSVEVAKLVGNLPLGLNILGSYLRGRIKEDWIHRLHRLRKGLNKQIEEAL 430

Query: 378 KVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           +V Y+GL   +++ IF   AC F   +   +   L+        G+  L+  SL+     
Sbjct: 431 RVEYEGLGSRKDKAIFRHIACLFNEVEINDIKLLLEDSDLDVITGLHNLLDNSLIHERRK 490

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGI--NLDSLK 492
            + MH L+QEMG E+VR +S K+P KR  L   +DIY VLN N +     GI  NL  L 
Sbjct: 491 TVQMHCLVQEMGKEMVRIQS-KNPAKREFLVDSKDIYDVLNGNANAEKVKGISWNLADLD 549

Query: 493 ELYLG--GCSNLKRFPEISCNIEDLDLK-------ETAIEELPSSIGNLS---------- 533
           EL++       +K    I    + L L           ++ LP  +  LS          
Sbjct: 550 ELHIHKRAFERMKNLDFIRIYDDSLALHIQEKLHFPQGLDYLPPKLRFLSWDGYPMRCLP 609

Query: 534 ------RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
                  LV L + N S L+ + + +   + L  +++ G   L +LP ++    +L  LN
Sbjct: 610 SNFLPEHLVVLRMRN-SKLEKLWNGVHLPRLLEDMDMEGSSNLTELP-DLSWAPNLTTLN 667

Query: 588 LAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L       +IPSS+  L  L  L L++C  L SLP
Sbjct: 668 LRNCPSLAEIPSSIMNLHCLKTLTLEDCTSLVSLP 702



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 3/118 (2%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            SLP  I+L SL  L L GCS   RFP+IS NI  L L +TAIEE+P  I    +L+ ++
Sbjct: 699 VSLPVNIDLISLYRLDLSGCSRFSRFPDISRNISFLILNQTAIEEVPWWINKFPKLICIE 758

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           +  C+ LK +S  +  LK L + + S C  L K    IG    +    +AE +  K+P
Sbjct: 759 MWECTKLKYISGNISELKLLEKADFSNCEALTK-ASWIGRTTVVAM--VAENNHTKLP 813



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 16/157 (10%)

Query: 512 IEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           +ED+D++ ++ + ELP  +     L  L+L NC  L  + S + NL  L+ L L  C  L
Sbjct: 640 LEDMDMEGSSNLTELPD-LSWAPNLTTLNLRNCPSLAEIPSSIMNLHCLKTLTLEDCTSL 698

Query: 571 EKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPC 625
             LP  I +L SL  L+L+    F + P   + +S L    + N   ++ +P    + P 
Sbjct: 699 VSLPVNI-DLISLYRLDLSGCSRFSRFPDISRNISFL----ILNQTAIEEVPWWINKFPK 753

Query: 626 GSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
              I    CT LK +S + + L    K     +FSNC
Sbjct: 754 LICIEMWECTKLKYISGNISELKLLEKA----DFSNC 786


>gi|356517237|ref|XP_003527295.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1098

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 245/761 (32%), Positives = 366/761 (48%), Gaps = 111/761 (14%)

Query: 1   MASSSSSINMIPHP----KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRG 55
           MAS+S++I          ++DVF+SFRG+D R++F   L  AL ++ IE F DDK + +G
Sbjct: 1   MASTSNAIIQCTSSSSSFEYDVFVSFRGEDTRNSFTGFLFEALKKQGIEAFKDDKDIRKG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
             I+P L  AIEGS + +V+FS+ YASS WCL EL  I        ++++P+FY VDPS 
Sbjct: 61  ESIAPELIRAIEGSHVFLVVFSKDYASSTWCLRELAHIWNCIRTSSRLLLPIFYDVDPSQ 120

Query: 116 -----AGYCPSLG---------------WMGI---------FDIPTSES-VLIEGNVNDI 145
                  Y  +                 W  +         +DI   +   +IE  V  I
Sbjct: 121 VRKQSGDYEKAFSQHQQSSRFQEKEIKTWREVLNHVGNLSGWDIRNKQQHAVIEEIVQQI 180

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYS 204
              L   F +   D LVG+ES    +   +  G   +   VGI G+GGIGK+T+  ++Y 
Sbjct: 181 KTILGCKFSTLPYDNLVGMESHFATLSKLICLGPVNDVPVVGITGMGGIGKSTLGRSLYE 240

Query: 205 NISSHFEGSYFMQNIRDESEKVGGLA-------------NIHLN-------FERRRLSRM 244
            IS  F    ++ ++       G L              N+ +           +RL   
Sbjct: 241 RISHRFNSCCYIDDVSKLYRLEGTLGVQKQLLSQSLNERNLEICNVCDGTLLAWKRLPNA 300

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFV-----PGSRVIITTRDVQLLKNHRGSRVGHVFEV 299
           K LIV  ++   KQ+D+  G  +  +      GS VII +RD Q+LK H    V  +++V
Sbjct: 301 KALIVLDNVDQDKQLDMFTGGRNDLLRKCLGKGSIVIIISRDQQILKAH---GVDVIYQV 357

Query: 300 KELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWE 359
           + L+ ND+L LF + AF  N+  + F +L++ V+ +  G PLA++V+GSYL       W 
Sbjct: 358 EPLNDNDALQLFCKKAFKNNYIMSDFEKLTSDVLSHCQGHPLAIEVIGSYLFDKDFSHWR 417

Query: 360 SAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
           SA+  L+      I  VL++S+D L+D  + IFLD ACFF  +D   V   LD   F+ +
Sbjct: 418 SALVSLRENKSKSIMNVLRISFDQLEDTHKEIFLDIACFFNDDDVEYVKEVLDFRGFNPE 477

Query: 420 IGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
             +  LV KSL+T+ + +I MHDLL ++G  IVR++S + P K SRLW  +D ++V+++N
Sbjct: 478 YDLQVLVDKSLITM-DEEIGMHDLLCDLGKYIVREKSPRKPWKWSRLWDIKDFHKVMSDN 536

Query: 480 TSL----------PTGI------------NLDSLKELYLGGCS-----NLK-RFPEISCN 511
                        P  I             + SLK LYLG  +     N      ++S  
Sbjct: 537 KVAENVEVIIIEDPYDILRTRTMRVDALSTMSSLKLLYLGYWNVGFEINFSGTLAKLSNE 596

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDL--TNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
           +  L  ++   E LP S     +LV+L L  +N   L   +  L N  +LR LNLSG   
Sbjct: 597 LGYLSWEKYPFECLPPSF-EPDKLVELRLPYSNIKQLWEGTKPLPN--NLRHLNLSGSKN 653

Query: 570 LEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
           L K+P  IG+   LE L+L      E+I  S+    KL+ L L+NCK L  LP    G  
Sbjct: 654 LIKMP-YIGDALYLESLDLEGCIQLEEIGLSVVLSRKLTSLNLRNCKSLIKLPRF--GED 710

Query: 629 IHARH-----CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           +  ++     C  L+ +  S  LL    K  +  N  NC N
Sbjct: 711 LILKNLDLEGCKKLRHIDPSIGLL----KKLEYLNLKNCKN 747



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 8/147 (5%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD-LKETAIEELPSSIGNLSRLVD 537
            SLP  I  L+SL+ L L GCS L    E+   + D + LK+  I+  P    + S    
Sbjct: 749 VSLPNSILGLNSLQYLILSGCSKLYN-TELFYELRDAEQLKKIDIDGAPIHFQSTSSYSR 807

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
               + S L   S        + +L+LS C  L ++P+ IG +  LE L+L+  +F  +P
Sbjct: 808 QHQKSVSCLMPSSPIF---PCMSKLDLSFC-NLVEIPDAIGIMSCLERLDLSGNNFATLP 863

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELP 624
           + +K+LSKL  L+LQ+CK+L+SLPELP
Sbjct: 864 N-LKKLSKLVCLKLQHCKQLKSLPELP 889



 Score = 45.4 bits (106), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 21/155 (13%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIE------ELPSSIGNLSRLVDLDLTNCS 544
           L  L L  C +L + P      EDL LK   +E       +  SIG L +L  L+L NC 
Sbjct: 690 LTSLNLRNCKSLIKLPRFG---EDLILKNLDLEGCKKLRHIDPSIGLLKKLEYLNLKNCK 746

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKL--EKLPEEIGNLESLEYLNL--AEKDFEKIPSSM 600
            L S+ + +  L SL+ L LSGC KL   +L  E+ + E L+ +++  A   F+   S  
Sbjct: 747 NLVSLPNSILGLNSLQYLILSGCSKLYNTELFYELRDAEQLKKIDIDGAPIHFQSTSSYS 806

Query: 601 KQLSK-LSDLRLQNCKRLQSLPELPCGSSIHARHC 634
           +Q  K +S L       + S P  PC S +    C
Sbjct: 807 RQHQKSVSCL-------MPSSPIFPCMSKLDLSFC 834



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 68/159 (42%), Gaps = 34/159 (21%)

Query: 459 DPGKRSRLWHP-EDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI--SCNIEDL 515
           +P K   L  P  +I Q+      LP     ++L+ L L G  NL + P I  +  +E L
Sbjct: 615 EPDKLVELRLPYSNIKQLWEGTKPLP-----NNLRHLNLSGSKNLIKMPYIGDALYLESL 669

Query: 516 DLKET-AIEELPSSIGNLSR------------------------LVDLDLTNCSGLKSVS 550
           DL+    +EE+  S+  LSR                        L +LDL  C  L+ + 
Sbjct: 670 DLEGCIQLEEIGLSVV-LSRKLTSLNLRNCKSLIKLPRFGEDLILKNLDLEGCKKLRHID 728

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
             +  LK L  LNL  C  L  LP  I  L SL+YL L+
Sbjct: 729 PSIGLLKKLEYLNLKNCKNLVSLPNSILGLNSLQYLILS 767


>gi|224061206|ref|XP_002300370.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222847628|gb|EEE85175.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 503

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 191/512 (37%), Positives = 271/512 (52%), Gaps = 61/512 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D R NF  HL  AL +  I TF DD ++ RG  I   L  AI+ SKISI+
Sbjct: 1   YQVFLSFRGADTRKNFTDHLYKALIQAGIHTFRDDDEIRRGENIDFELQKAIQQSKISII 60

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSL------- 122
           +FS+ YASSRWCL+ELV I+E K     IV+PVFY VDPS  G     +  +        
Sbjct: 61  VFSKDYASSRWCLDELVMIMERKRNDDCIVLPVFYDVDPSQVGRQTGSFAAAFVEHEKSF 120

Query: 123 --------GW----------MGIFDIPTSESVLIEGNVNDISKKLS-DLFPSDNKDQLVG 163
                   GW           G+      E+  ++  V  +SK L   LF        +G
Sbjct: 121 NEEKERVSGWRIALKEVADLAGMVLGDGYEAQFVQSIVEKVSKNLDRKLFHVPL--HFIG 178

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD-- 221
            + ++  I S L  GS +     ++GIGG+GKTTIA ++++     FEG  F+   R   
Sbjct: 179 RDPLVNYINSWLQDGSHDVVIAILYGIGGVGKTTIAKSVFNQNIHKFEGKSFLSKFRSKD 238

Query: 222 ----ESEKVGGL--ANIHLNFERRRLSRMK-------VLIVFYDLTDLKQIDLLIGRLDG 268
               + + +  +    + +N E   + ++K       +LIV  D+    Q + +IG  + 
Sbjct: 239 IVCLQRQLISDILKKTVEINDEDEGILKIKDALCCRRILIVLDDVDKRDQFNKIIGMQNW 298

Query: 269 FVPGSRVIITTRDVQLLKNH--RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
              GS++I+TTR+  L   +   G R     +V+ L    SL LFS NAFGQ HP  GF+
Sbjct: 299 LCKGSKIIVTTRNKGLFSANDIEGVRC----KVEPLDDEKSLELFSWNAFGQAHPVDGFV 354

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD- 385
           E S  ++ + NG+PLAL V+GS L G   E WESA+ +++ +P+ ++QKVL++SYD LD 
Sbjct: 355 EDSWRIVHHCNGLPLALGVIGSSLSGKGREIWESALKQMEVIPNFEVQKVLRISYDFLDG 414

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLL 444
           D  +N+FLD ACFF G D       LD     A+ GI  L+ + LV I+   K+ MH L+
Sbjct: 415 DYPKNLFLDIACFFNGMDVDDAARILDGLDKGARFGIDNLIDRCLVEINVYQKLWMHQLV 474

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           ++MG EI RQES     K  R+W  ED + VL
Sbjct: 475 RDMGREIARQES----PKCQRIWLHEDAFTVL 502


>gi|297791725|ref|XP_002863747.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309582|gb|EFH40006.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 989

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 218/719 (30%), Positives = 361/719 (50%), Gaps = 96/719 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++D+FLSF G+D+R +F+SH    L R+ I  F D+++ RG  + P L  AI  S+I++V
Sbjct: 17  ENDLFLSFSGEDIRKSFLSHFYKELDRKPILVFKDNEIKRGISLGPKLKRAIRDSRIAVV 76

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-------- 126
           IFS  YASS WCLNEL++I+  K ++ Q+V+P+F+ +DP+       +  M         
Sbjct: 77  IFSRKYASSSWCLNELLEIVRCKKEFSQVVIPIFFHLDPTHVRKQTGVFGMNFEKTCHNK 136

Query: 127 --------------IFDIP--------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                         + +I          +E+ +IE  + D+  +L+ L PS + +  VG+
Sbjct: 137 TEKMKIRLRRALTEVANITGYHSSVTCKNEAKMIEAIIADVLGELA-LTPSKDYEDFVGI 195

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ------- 217
           E+ I ++   L   + E   VGI G  GIGKT+IA  +++ +S  F  + F+        
Sbjct: 196 ETHIAKMNFLLHLEAKEVRMVGICGPSGIGKTSIARVLFNRLSRRFRCNVFIDRAFLSKS 255

Query: 218 -------NIRDESEK----------VGGLANI---HLNFERRRLSRMKVLIVFYDLTDLK 257
                  N+ D + K          + G  +I   HL     RL   KVLI   DL    
Sbjct: 256 MEHYSGANLGDYNMKLHLQGIFLSEILGKRDIKICHLGAVGERLKNHKVLIFIDDLEYQV 315

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
            +D L G  D F  GSRV++ T+   LLK H    +G ++EV   S   SL +  + AF 
Sbjct: 316 VLDTLAGHTDWFGCGSRVVVITKYKHLLKAHG---IGRIYEVPLPSNPLSLQILCQYAFR 372

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           QNHP  GF+EL++     A  +PL L VLGS+L+   ++ W   + +  +  H +I++ L
Sbjct: 373 QNHPPDGFMELASETSLRAGNLPLVLNVLGSHLRSRDKKYWMDMLLRFGKGQHGNIEETL 432

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           K+SY+GL+  ++ IF   ACFF G +   + + L        +GI  LV KSL+  + N 
Sbjct: 433 KLSYNGLNKNDEAIFRHIACFFNGEEVDDIKSLLADSDLDVNMGIKNLVDKSLIKETCNT 492

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKE 493
           + MH L+QE+G EI R +S  +PG+R  +   +D++ +L +NT     L   +++D   E
Sbjct: 493 VEMHSLIQEIGKEINRTQS-SEPGEREFIVDSKDVFTILEDNTGTENVLGISLDIDETDE 551

Query: 494 LYLGGCS------------NLKRFPEISCNI-EDLDL----------KETAIEELPSSIG 530
           L++   +            + K   E+  N+ ED D           +   +  +PS+  
Sbjct: 552 LHIHESAFKEMRNLQFLRISTKENKEVRLNLPEDFDYLPPKLRLLSWRGYPLRSMPSTFC 611

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-A 589
             S LV L++   S  + +   +  L +L++++L G   L+++P ++    +LE LNL A
Sbjct: 612 PQS-LVKLEM-RYSYFEMLWDGVQPLTTLKKMDLWGSKNLKEIP-DLSMATNLETLNLGA 668

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
                ++ SS++ L+KL  L L  C+ L++LP    L     ++   C+S+K+  + ST
Sbjct: 669 CSSLVELHSSVQYLNKLKRLNLSYCENLETLPTNFNLQALDCLNLFGCSSIKSFPDIST 727



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 53/87 (60%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT  NL +L  L L GCS++K FP+IS NI  L+L +T IEE+P  I N + L  + +
Sbjct: 698 TLPTNFNLQALDCLNLFGCSSIKSFPDISTNISYLNLSQTRIEEVPWWIENFTELRTIYM 757

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            NC  L+ V+  +  LK L  ++ S C
Sbjct: 758 WNCDKLEYVTLNISKLKHLAIVDFSDC 784



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 81/134 (60%), Gaps = 7/134 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK++ L G  NLK  P++S   N+E L+L   +++ EL SS+  L++L  L+L+ C 
Sbjct: 635 LTTLKKMDLWGSKNLKEIPDLSMATNLETLNLGACSSLVELHSSVQYLNKLKRLNLSYCE 694

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+++ +   NL++L  LNL GC  ++  P+   N+    YLNL++   E++P  ++  +
Sbjct: 695 NLETLPTNF-NLQALDCLNLFGCSSIKSFPDISTNIS---YLNLSQTRIEEVPWWIENFT 750

Query: 605 KLSDLRLQNCKRLQ 618
           +L  + + NC +L+
Sbjct: 751 ELRTIYMWNCDKLE 764


>gi|15223555|ref|NP_176047.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9954758|gb|AAG09109.1|AC009323_20 Putative disease resistance protein [Arabidopsis thaliana]
 gi|332195284|gb|AEE33405.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1096

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 218/715 (30%), Positives = 344/715 (48%), Gaps = 115/715 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +++VF SF G DVR  F+SHL        I  F D ++ R   I+P+L+ AI  S+I+IV
Sbjct: 14  RYNVFTSFHGPDVRKTFLSHLRKQFNYNGITMFDDQRIERSQIIAPALTEAIRESRIAIV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           + S+ YASS WCL+EL++IL+ K + GQIV+ VFY V PSD                   
Sbjct: 74  LLSKNYASSSWCLDELLEILDCKEQLGQIVMTVFYGVHPSDVRKQTGDFGIAFNETCARK 133

Query: 117 ------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  +  +L ++G      F    +E+ +IE   +D+S KL+   PS + D ++G+E
Sbjct: 134 TEEQRQKWSQALTYVGNIAGEHFQNWDNEAKMIEKIASDVSDKLNTT-PSRDFDGMIGLE 192

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           + +++IES L         VGI G  GIGK+TIA A++S +S  F+ + FM N+  ES K
Sbjct: 193 AHLRKIESLLDLDYDGAKIVGISGPAGIGKSTIARALHSVLSKRFQHNCFMDNLH-ESYK 251

Query: 226 VG----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
           +G                      G+   HL   R RL   KVLI+  D+  L Q+D L 
Sbjct: 252 IGLVEYGLRLRLQEQLLSKILNLDGIRIAHLGVIRERLHDQKVLIILDDVESLDQLDAL- 310

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV-FEVKELSYNDSLTLFSRNAFGQNHPA 322
             ++ F PGSRVI+TT + ++L+ H  S + HV F     S  ++L +F  +AF Q  P 
Sbjct: 311 ANIEWFGPGSRVIVTTENKEILQQHGISDIYHVGFP----SSKEALMIFCLSAFRQLSPP 366

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             F+ L+  V K    +PLAL VLGS L+G +  +W   + +L+      I+ VLKV Y+
Sbjct: 367 DRFMNLAAEVAKLCGYLPLALHVLGSSLRGKNYSDWIEELPRLQTCLDGRIESVLKVGYE 426

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK---IT 439
            L +++Q +FL  A FF       V + L     + ++G+  L  + L+ I +     + 
Sbjct: 427 SLHEKDQALFLYIAVFFNYQHADYVTSMLAKTNLNVRLGLKILANRHLIHIGHGAKGIVV 486

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLD-------- 489
           MH LL+ M  +++   S ++P KR  L   ++I  VL   E      GI+ D        
Sbjct: 487 MHRLLKVMARQVI---SKQEPWKRQILVDTQEISYVLENAEGNGSIAGISFDVGEINKLT 543

Query: 490 ---------------SLKELYLGGCSNL----------------------KRFPEISC-- 510
                           + + +  G   +                      K  P   C  
Sbjct: 544 ISAKAFERMHNLLLLKVYDPWFTGKGQVHIPEEMDFLPRLSLLRWDAYTRKTLPRRFCPE 603

Query: 511 NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           N+ +L++ ++ +E+L      L+ L  + L+  S LK + + L N K+L RL+L  C+ L
Sbjct: 604 NLVELNMPDSQLEKLWEGTQLLANLKTMKLSRSSRLKELPN-LSNAKNLERLDLHECVAL 662

Query: 571 EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            +LP  I NL  L +L        ++  ++  L  L D+++  C RL+S P++P 
Sbjct: 663 LELPSSISNLHKLYFLETNHCRRLQVIPTLTNLVSLEDIKMMGCLRLKSFPDIPA 717



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 85/182 (46%), Gaps = 33/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT  NL SL+++ + GC  LK FP+I  NI  L + ET I E P+S+ + S +   D++
Sbjct: 689 IPTLTNLVSLEDIKMMGCLRLKSFPDIPANIIRLSVMETTIAEFPASLRHFSHIESFDIS 748

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK+ S+ L                            S+  L++     E I   +K
Sbjct: 749 GSVNLKTFSTLLPT--------------------------SVTELHIDNSGIESITDCIK 782

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            L  L  L L NCK+L SLP+LP     + A HC SL+ +S    L T ++      +FS
Sbjct: 783 GLHNLRVLALSNCKKLTSLPKLPSSLKWLRASHCESLERVSEP--LNTPNAD----LDFS 836

Query: 661 NC 662
           NC
Sbjct: 837 NC 838


>gi|357499835|ref|XP_003620206.1| Resistance protein [Medicago truncatula]
 gi|355495221|gb|AES76424.1| Resistance protein [Medicago truncatula]
          Length = 777

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 222/577 (38%), Positives = 310/577 (53%), Gaps = 74/577 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SF G D R+ F  HL  AL    I  FIDD + +RG E  P++  AI  S+I+I+
Sbjct: 13  YDVFISFEGFDTRNGFTGHLWKALNDIGILAFIDDTEFSRGEETKPAIFKAIHVSRIAII 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYG--QIVVPVFYLVD---------PSDAGYCPS-- 121
           +FS+ YA S++ L EL  I+++  +    + +VPV+Y ++         P +A +     
Sbjct: 73  VFSDNYAGSKFLLEELAFIVDNFQQSDNLRFIVPVYYNIEASHVRHQSGPFEAAFVKHEE 132

Query: 122 ---------LGWMGI-----------FDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                    L W              FD    E   ++  V +IS++L D  P    D  
Sbjct: 133 RFHENREKVLKWKTALSQVANLPGWHFDGVEYEHQFLQKIVKEISRRL-DRAPLHVADYP 191

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG++S + E+   L   S E  TVGI+GIGGIGKTT+A A+Y+ IS  FE S F+ NIR 
Sbjct: 192 VGLDSRLGEVFRHLELESHEVLTVGIYGIGGIGKTTLARAVYNTISDQFETSCFLSNIRK 251

Query: 222 ES-------------EKVGGLANIHLNFE-------RRRLSRMKVLIVFYDLTDLKQIDL 261
            S              ++ GL +I L          + RL R KVL++  D+  L+Q++ 
Sbjct: 252 SSNTQSLAHLQNILLSEMTGLKDIQLKDTSKGISEIKHRLYRKKVLLILDDVDRLEQMEA 311

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G LD F PGSRV+ITTRD  LL   RG  V   +EV+EL+  D+L L S   F Q   
Sbjct: 312 LAGGLDWFGPGSRVVITTRDRHLLA-FRG--VERRYEVQELNDVDALDLLSHKVFKQGIV 368

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              + EL N  + YA+G+PLAL+V+GS L G+S ++ E A+N+ KR+   DIQK+L+VS+
Sbjct: 369 DPNYTELLNRAVTYASGLPLALEVIGSSLFGLSVDQCEHALNQFKRILPKDIQKLLRVSF 428

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFS--AKIGISRLVGKSLVTISNNKI- 438
           D LD E +NIFLD  C FKG     V   L A R+    K  I  L+ KSL+ I + K+ 
Sbjct: 429 DALDQEVKNIFLDITCCFKGYALADVEQLLCA-RYGHDMKYHIKVLIDKSLINILDGKVT 487

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGG 498
           T H L++ MG EIVR+ES +DPG+RSRLW  EDI +VL  N            K   L G
Sbjct: 488 TTHPLIESMGKEIVREESPEDPGRRSRLWFSEDIVEVLKNN------------KVRLLQG 535

Query: 499 CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
            S+++     S  IED +  E   + LP+S+  L  L
Sbjct: 536 TSSIEIIHLDSPLIEDEEAIEWDGKYLPNSLKVLEWL 572


>gi|227438227|gb|ACP30603.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1056

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 217/726 (29%), Positives = 347/726 (47%), Gaps = 130/726 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VFLSF G DVR  F+SH+   L  + +  F DD++ RG  I   L  AI  S+ +IV+
Sbjct: 15  YHVFLSFHGPDVRKGFLSHVRKELKSKGLIVFFDDEIKRGESIDQELVEAIRQSRTAIVL 74

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----AGYCPSL--------- 122
            S  Y SS WCLNELV+I++ + +  Q V+ +FY VDPSD     G    L         
Sbjct: 75  LSPNYTSSSWCLNELVEIIKCREEDRQTVLTIFYEVDPSDVRKQTGVFGKLFKKTCVGKT 134

Query: 123 -----GW-------MGIFDIPTS----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 W        GI    +S    E+ LI+   +D+   L    PS + D  VG+ +
Sbjct: 135 EKVKKAWKQALEDVAGIAGYHSSNCANEADLIKKVASDVMAVLG-FTPSKDFDDFVGIRA 193

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            I EI+S+L+  S E   +G+ G  GIGKTT A  +Y+ +S  F+ + F++NIR   EK 
Sbjct: 194 RITEIKSKLIIQSEEVKVIGVVGPAGIGKTTTARVLYNQLSPDFQFNTFLENIRGSYEKP 253

Query: 227 ----------------------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
                                 G +  +HL   +  LS  KVL+V  ++ +  Q++ +  
Sbjct: 254 CGNDYQLKLRLQKNLLSQIFNKGDIEVLHLGRAQEMLSDKKVLVVLDEVDNWWQVEEMAK 313

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           +     P S ++ITT D +LL+   G  + H++E+      +SL +F + AFGQ +P  G
Sbjct: 314 QRAWVGPESIIVITTEDRKLLEA-LGLGIDHIYEMTYPISYESLQIFCQYAFGQKYPDNG 372

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F  L++ V   A  +PL L+V+GSYL+GMS ++W  A+  L+     +I+  L+ SY+ L
Sbjct: 373 FESLASEVTCLAGNLPLGLRVMGSYLRGMSRDKWIEALPWLRSTLDREIESTLRFSYNAL 432

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA---KIGISRLVGKSLVTISNNKITMH 441
            D E+ +FL  ACFF G   + V +F   C  S+     G+  L  KSL++I   ++ MH
Sbjct: 433 RDNERTLFLHIACFFDG---FKVDSFKRCCANSSLEVNHGLEVLAQKSLISIEKGRVKMH 489

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINL----------- 488
            LL++MG EIV+++S+++PGK   L   ++I  VL+E+T+     GI L           
Sbjct: 490 RLLRQMGREIVKKQSMENPGKLQFLTDKKEISDVLDEDTATGNVLGIQLRWGEKIQINRS 549

Query: 489 -----------------------------DSLKELYLGGCSNLKRFP---------EISC 510
                                        D+L+ LY   C  L+ +P         E+  
Sbjct: 550 AFQGMNNLQFLYFESFTTTCISEDLDCLPDNLRLLYWRMCP-LRVWPSKFSGKFLVELIM 608

Query: 511 NIEDLDLKETAIEELP-------SSIGNLSRLVDLD---------LTNCSGLKSVSSRLC 554
                ++     + LP       S   NL ++ DL          L +C  L  ++S + 
Sbjct: 609 PNSKFEMLWEGTKPLPCLKIFDLSRSSNLKKVPDLSKATSLEELLLHHCGNLLELTSSIG 668

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
           N   L RL++ GC  ++  P      +S+  L+L     +++P  +K L +L  L ++ C
Sbjct: 669 NATKLYRLDIPGCTHIKDFPNVS---DSILELDLCNTGIKEVPPWIKNLLRLRKLIMRRC 725

Query: 615 KRLQSL 620
           ++L+++
Sbjct: 726 EQLKTI 731



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 39/64 (60%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           N   L  L + GC+++K FP +S +I +LDL  T I+E+P  I NL RL  L +  C  L
Sbjct: 669 NATKLYRLDIPGCTHIKDFPNVSDSILELDLCNTGIKEVPPWIKNLLRLRKLIMRRCEQL 728

Query: 547 KSVS 550
           K++S
Sbjct: 729 KTIS 732


>gi|10177584|dbj|BAB10815.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1160

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 234/721 (32%), Positives = 352/721 (48%), Gaps = 123/721 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VF SF G+DVR+ F+SH    L R+ I +F D+++ R   + P L   I  S+I++V+
Sbjct: 14  YHVFPSFSGEDVRNTFLSHFLKELDRKLIISFKDNEIERSQSLDPELKHGIRNSRIAVVV 73

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YC---- 119
           FS+ YASS WCLNEL++I++ K ++GQ+V+P+FY +DPS       D G      C    
Sbjct: 74  FSKTYASSSWCLNELLEIVKCKKEFGQLVIPIFYNLDPSHVRKQTGDFGKIFEKTCRNKT 133

Query: 120 --PSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W   + D+            +E+ +IE   NDI  K+ ++ PS++ + LVG+E 
Sbjct: 134 VDEKIRWKEALTDVANILGYHIVTWDNEASMIEEIANDILGKM-NISPSNDFEDLVGIED 192

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR-DESEK 225
            I ++ S L   S E   VGIWG  GIGKTTIA A++S +S  F+ S F+  +   +S +
Sbjct: 193 HITKMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSME 252

Query: 226 VGGLAN-------------------------IHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           V   AN                         IH+    + +   K LIV  DL D   +D
Sbjct: 253 VYSGANLVDYNMKLHLQRAFLAEIFDKKDIKIHVGAMEKMVKHRKALIVIDDLDDQDVLD 312

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L  +   F  GSR+I+ T +   L   R +R+ H+++V   S   +L +F R+AF +N 
Sbjct: 313 ALADQTQWFGSGSRIIVVTENKHFL---RANRIDHIYKVCLPSNALALEMFCRSAFKKNS 369

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD--IQKVLK 378
           P   FLELS+ V   A  +PL L VLGS L+G+++  W   ++ L R+  +D  I K L+
Sbjct: 370 PPDDFLELSSEVALRAGNLPLGLNVLGSNLRGINKGYW---IDMLPRLQGLDGKIGKTLR 426

Query: 379 VSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           VSYDGL++ +++ IF   AC F G     +   L        IG+  LV +SL+    N 
Sbjct: 427 VSYDGLNNRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNT 486

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKE 493
           + MH LLQE+G EIVR +S   PG+R  L   +DI  VL  NT     L   +++D   E
Sbjct: 487 LEMHSLLQELGKEIVRTQS-NQPGEREFLVDLKDICDVLEHNTGTKKVLGITLDIDETDE 545

Query: 494 LYL-----GGCSNL------------------------------------KRFPEISC-- 510
           L++      G  NL                                     R+P   C  
Sbjct: 546 LHIHESSFKGMHNLLFLKIYTKKLDQKKKVRWHLPERFDYLPSRLRLLRFDRYPS-KCLP 604

Query: 511 ------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
                 N+  L ++++ +E+L   + +L+ L ++DL     LK +   L    +L  L L
Sbjct: 605 SNFHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPD-LSMATNLETLKL 663

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           S C  L +LP  I  L  L  L+++  D  E IPS +  L  L  L L  C RL+S  ++
Sbjct: 664 SSCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGV-NLKSLDRLNLSGCSRLKSFLDI 722

Query: 624 P 624
           P
Sbjct: 723 P 723



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 59/91 (64%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            +LPTGINLDSL  L L  CS LK FP+IS NI DL+L  TAIEE+P SI  LS L  LD
Sbjct: 805 VTLPTGINLDSLISLDLSHCSQLKTFPDISTNISDLNLSYTAIEEVPLSIEKLSLLCYLD 864

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           +  CS L  VS  +  LK L R + S C++L
Sbjct: 865 MNGCSNLLCVSPNISKLKHLERADFSDCVEL 895



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 52/230 (22%)

Query: 467 WHPEDIYQVLNENTSLPT---GIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE- 519
           +HPE++ ++  + + L     G++ L  L+ + L G  NLK  P++S   N+E L L   
Sbjct: 607 FHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSMATNLETLKLSSC 666

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK---LPEE 576
           +++ ELPSSI  L++L DLD++ C  L+++ S + NLKSL RLNLSGC +L+    +P  
Sbjct: 667 SSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGV-NLKSLDRLNLSGCSRLKSFLDIPTN 725

Query: 577 IG--------------NLESLEYLNLAEK------------------------DFEKIPS 598
           I                L++L+ L L E+                         F ++PS
Sbjct: 726 ISWLDIGQTADIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNPSFVEVPS 785

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           S++ L +L  L + NC+ L +LP    L    S+   HC+ LKT  + ST
Sbjct: 786 SIQNLYQLEHLEIMNCRNLVTLPTGINLDSLISLDLSHCSQLKTFPDIST 835



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 48/181 (26%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA------------------- 521
           ++P+G+NL SL  L L GCS LK F +I  NI  LD+ +TA                   
Sbjct: 695 TIPSGVNLKSLDRLNLSGCSRLKSFLDIPTNISWLDIGQTADIPSNLRLQNLDELILCER 754

Query: 522 -------------------------IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
                                      E+PSSI NL +L  L++ NC  L ++ + + NL
Sbjct: 755 VQLRTPLMTMLSPTLTRLTFSNNPSFVEVPSSIQNLYQLEHLEIMNCRNLVTLPTGI-NL 813

Query: 557 KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
            SL  L+LS C +L+  P+   N+     LNL+    E++P S+++LS L  L +  C  
Sbjct: 814 DSLISLDLSHCSQLKTFPDISTNISD---LNLSYTAIEEVPLSIEKLSLLCYLDMNGCSN 870

Query: 617 L 617
           L
Sbjct: 871 L 871


>gi|42568353|ref|NP_199459.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008006|gb|AED95389.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1127

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 234/721 (32%), Positives = 352/721 (48%), Gaps = 123/721 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VF SF G+DVR+ F+SH    L R+ I +F D+++ R   + P L   I  S+I++V+
Sbjct: 14  YHVFPSFSGEDVRNTFLSHFLKELDRKLIISFKDNEIERSQSLDPELKHGIRNSRIAVVV 73

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YC---- 119
           FS+ YASS WCLNEL++I++ K ++GQ+V+P+FY +DPS       D G      C    
Sbjct: 74  FSKTYASSSWCLNELLEIVKCKKEFGQLVIPIFYNLDPSHVRKQTGDFGKIFEKTCRNKT 133

Query: 120 --PSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W   + D+            +E+ +IE   NDI  K+ ++ PS++ + LVG+E 
Sbjct: 134 VDEKIRWKEALTDVANILGYHIVTWDNEASMIEEIANDILGKM-NISPSNDFEDLVGIED 192

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR-DESEK 225
            I ++ S L   S E   VGIWG  GIGKTTIA A++S +S  F+ S F+  +   +S +
Sbjct: 193 HITKMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSME 252

Query: 226 VGGLAN-------------------------IHLNFERRRLSRMKVLIVFYDLTDLKQID 260
           V   AN                         IH+    + +   K LIV  DL D   +D
Sbjct: 253 VYSGANLVDYNMKLHLQRAFLAEIFDKKDIKIHVGAMEKMVKHRKALIVIDDLDDQDVLD 312

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L  +   F  GSR+I+ T +   L   R +R+ H+++V   S   +L +F R+AF +N 
Sbjct: 313 ALADQTQWFGSGSRIIVVTENKHFL---RANRIDHIYKVCLPSNALALEMFCRSAFKKNS 369

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD--IQKVLK 378
           P   FLELS+ V   A  +PL L VLGS L+G+++  W   ++ L R+  +D  I K L+
Sbjct: 370 PPDDFLELSSEVALRAGNLPLGLNVLGSNLRGINKGYW---IDMLPRLQGLDGKIGKTLR 426

Query: 379 VSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           VSYDGL++ +++ IF   AC F G     +   L        IG+  LV +SL+    N 
Sbjct: 427 VSYDGLNNRKDEAIFRHIACIFNGEKVSDIKLLLANSNLDVNIGLKNLVDRSLICERFNT 486

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKE 493
           + MH LLQE+G EIVR +S   PG+R  L   +DI  VL  NT     L   +++D   E
Sbjct: 487 LEMHSLLQELGKEIVRTQS-NQPGEREFLVDLKDICDVLEHNTGTKKVLGITLDIDETDE 545

Query: 494 LYL-----GGCSNL------------------------------------KRFPEISC-- 510
           L++      G  NL                                     R+P   C  
Sbjct: 546 LHIHESSFKGMHNLLFLKIYTKKLDQKKKVRWHLPERFDYLPSRLRLLRFDRYPS-KCLP 604

Query: 511 ------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
                 N+  L ++++ +E+L   + +L+ L ++DL     LK +   L    +L  L L
Sbjct: 605 SNFHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPD-LSMATNLETLKL 663

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           S C  L +LP  I  L  L  L+++  D  E IPS +  L  L  L L  C RL+S  ++
Sbjct: 664 SSCSSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGV-NLKSLDRLNLSGCSRLKSFLDI 722

Query: 624 P 624
           P
Sbjct: 723 P 723



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 59/91 (64%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            +LPTGINLDSL  L L  CS LK FP+IS NI DL+L  TAIEE+P SI  LS L  LD
Sbjct: 805 VTLPTGINLDSLISLDLSHCSQLKTFPDISTNISDLNLSYTAIEEVPLSIEKLSLLCYLD 864

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           +  CS L  VS  +  LK L R + S C++L
Sbjct: 865 MNGCSNLLCVSPNISKLKHLERADFSDCVEL 895



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 52/230 (22%)

Query: 467 WHPEDIYQVLNENTSLPT---GIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE- 519
           +HPE++ ++  + + L     G++ L  L+ + L G  NLK  P++S   N+E L L   
Sbjct: 607 FHPENLVKLQMQQSKLEKLWDGVHSLAGLRNMDLRGSRNLKEIPDLSMATNLETLKLSSC 666

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK---LPEE 576
           +++ ELPSSI  L++L DLD++ C  L+++ S + NLKSL RLNLSGC +L+    +P  
Sbjct: 667 SSLVELPSSIQYLNKLNDLDMSYCDHLETIPSGV-NLKSLDRLNLSGCSRLKSFLDIPTN 725

Query: 577 IG--------------NLESLEYLNLAEK------------------------DFEKIPS 598
           I                L++L+ L L E+                         F ++PS
Sbjct: 726 ISWLDIGQTADIPSNLRLQNLDELILCERVQLRTPLMTMLSPTLTRLTFSNNPSFVEVPS 785

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           S++ L +L  L + NC+ L +LP    L    S+   HC+ LKT  + ST
Sbjct: 786 SIQNLYQLEHLEIMNCRNLVTLPTGINLDSLISLDLSHCSQLKTFPDIST 835



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 48/181 (26%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA------------------- 521
           ++P+G+NL SL  L L GCS LK F +I  NI  LD+ +TA                   
Sbjct: 695 TIPSGVNLKSLDRLNLSGCSRLKSFLDIPTNISWLDIGQTADIPSNLRLQNLDELILCER 754

Query: 522 -------------------------IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
                                      E+PSSI NL +L  L++ NC  L ++ + + NL
Sbjct: 755 VQLRTPLMTMLSPTLTRLTFSNNPSFVEVPSSIQNLYQLEHLEIMNCRNLVTLPTGI-NL 813

Query: 557 KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
            SL  L+LS C +L+  P+   N+     LNL+    E++P S+++LS L  L +  C  
Sbjct: 814 DSLISLDLSHCSQLKTFPDISTNISD---LNLSYTAIEEVPLSIEKLSLLCYLDMNGCSN 870

Query: 617 L 617
           L
Sbjct: 871 L 871


>gi|357516577|ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1406

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 238/760 (31%), Positives = 361/760 (47%), Gaps = 144/760 (18%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           + DVFLSFRG+D R  F   L  +L ++ +  F+DD+ L+RG+ I+ +L  AI+ S  SI
Sbjct: 16  RWDVFLSFRGEDTRECFTKKLYESLHKQGVRAFMDDEGLDRGDHIATTLLEAIDDSAASI 75

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---------GY------ 118
           VI S  YA S WCL+EL +I + +    ++++PVFY VDPS           G+      
Sbjct: 76  VIISPNYADSHWCLDELNRICDLE----RLIIPVFYKVDPSHVRKQLGPFQDGFNYLEKR 131

Query: 119 --------------CPSLGWMGIFDIPTSESV----LIEGNVNDISKKLSDLFPSDNKDQ 160
                            +G +  F   +S+      LI   V  + K+LS+  P    + 
Sbjct: 132 FANEKDKILKWRDSMLKIGGLAGFVFNSSDDGDHENLIRRLVKRVLKELSNT-PMVVSEF 190

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            VG+   ++++ + L   S     +G++G+GG+GKTT+A A++++    FE   F+ N+R
Sbjct: 191 AVGINERVEKVINLLQLQSNNVKVLGLYGMGGVGKTTLAKALFNSFVGRFERRCFISNVR 250

Query: 221 DESEKVGGLANIHLNFER----------------------RRLSRM-KVLIVFYDLTDLK 257
             + K  GL +I  N  +                      +R+ R  +VL+V  D+  + 
Sbjct: 251 QFASKDDGLVSIQNNIIKDLSSQEGTRSFISDVKVGISTIKRIVRENRVLLVLDDVDHVN 310

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+D LIG+ + F  GS +IITTRD  +L       V  ++EV EL   ++L LFS +A  
Sbjct: 311 QLDALIGKREWFHEGSCIIITTRDTTVLPE---KHVNELYEVTELYAEEALELFSYHALR 367

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKV 376
           +  P   FL  S  ++     +PLAL+V G +L G    +EWE  V KLK +   ++  V
Sbjct: 368 KKDPPPDFLSFSKQIVSLTGRMPLALEVFGCFLFGKRRVDEWEDVVKKLKTIRPGNLHDV 427

Query: 377 LKVSYDGLDDEEQNIFLDTACFF--KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI- 433
           LK+SYDGLD++E+ IFLD ACFF   G  +  V++ L  C F  +I  + LV K L+ + 
Sbjct: 428 LKISYDGLDEQEKCIFLDIACFFVQMGMKRDDVIDVLRGCGFRGEIATTVLVEKCLIKVR 487

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLD-- 489
            +N + MHD +++MG +IV  E+  DPG RSRLW   +I  VL   + T    GI LD  
Sbjct: 488 EDNTLWMHDQIRDMGRQIVLDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGIVLDFK 547

Query: 490 -------------SLKELYLGGCSNLKRF-PEISCNIEDLDLKETAIEELPS-------- 527
                           E Y     + K F P +S  +  ++      + LP         
Sbjct: 548 ERSNQWSKNYPPQPQAEKYNQVMLDTKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWR 607

Query: 528 -------SIGNLSR-LVDLDLTNCSGLKSVSSRLCNLKS------LRRLNLSGCLKLEKL 573
                  S+  L R L  LDL+N   +KS    L  LKS      L  +NLS C +L  +
Sbjct: 608 GCPLECISLDTLPRELAVLDLSNGQKIKS----LWGLKSQKVPENLMVMNLSNCYQLAAI 663

Query: 574 P-----------------------EEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
           P                       E IG+L +L  LNL   ++  ++PS +  L  L  L
Sbjct: 664 PDLSWCLGLEKINLANCINLTRIHESIGSLTTLRNLNLTRCENLIELPSDVSGLKHLESL 723

Query: 610 RLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
            L  C +L++LPE       +     SLKTL+   T + +
Sbjct: 724 ILSECSKLKALPE-------NIGMLKSLKTLAADKTAIVK 756



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 15/176 (8%)

Query: 482  LPTGINL-DSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
            LP  I L ++L  L L  C  LK+ P    N++ L    ++ETA+ +LP S G LS L  
Sbjct: 944  LPVSIGLLENLVNLTLSRCRMLKQLPASIGNLKSLCHLKMEETAMVDLPESFGMLSSLRT 1003

Query: 538  LDLTNCSGLKSVSSR----------LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
            L +     L  +S +           CNL  L  L+        K+P++   L  LE L 
Sbjct: 1004 LRMAKRPHLVPISVKNTGSFVLPPSFCNLTLLHELDARAWRLSGKIPDDFEKLSLLETLK 1063

Query: 588  LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
            L + +F  +PSS+K LS L +L L NC  L SLP LP     ++A +C +L+T+ +
Sbjct: 1064 LDQNNFHSLPSSLKGLSILKELSLPNCTELISLPLLPSSLIKLNASNCYALETIHD 1119



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 28/168 (16%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVD 537
           LP  I  L  L+ L L  CS+L+R P+     C +++L L ET ++ELP+++G L  L  
Sbjct: 757 LPESIFRLTKLERLVLDRCSHLRRLPDCIGKLCALQELSLYETGLQELPNTVGFLKNLEK 816

Query: 538 LDLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           L L  C                       SG+K + S + +L  LR L +  C KL KLP
Sbjct: 817 LSLMGCEGLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSYLRTLLVRKC-KLSKLP 875

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +    L S+  L+L       +P  + +L +L  L + NC  L+SLPE
Sbjct: 876 DSFKTLASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSNLESLPE 923



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 26/166 (15%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  +  L +L++L L GC  L   P+   N+E L       + I+ELPS+IG+LS L  
Sbjct: 804 LPNTVGFLKNLEKLSLMGCEGLTLMPDSIGNLESLTELLASNSGIKELPSTIGSLSYLRT 863

Query: 538 LDLTNC----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           L +  C                      + ++ +  ++  LK LR+L +  C  LE LPE
Sbjct: 864 LLVRKCKLSKLPDSFKTLASIIELDLDGTYIRYLPDQIGELKQLRKLEIGNCSNLESLPE 923

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            IG L SL  LN+   +  ++P S+  L  L +L L  C+ L+ LP
Sbjct: 924 SIGYLTSLNTLNIINGNIRELPVSIGLLENLVNLTLSRCRMLKQLP 969



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 3/137 (2%)

Query: 489 DSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSG 545
           ++L  + L  C  L   P++S    +E ++L     +  +  SIG+L+ L +L+LT C  
Sbjct: 647 ENLMVMNLSNCYQLAAIPDLSWCLGLEKINLANCINLTRIHESIGSLTTLRNLNLTRCEN 706

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L  + S +  LK L  L LS C KL+ LPE IG L+SL+ L   +    K+P S+ +L+K
Sbjct: 707 LIELPSDVSGLKHLESLILSECSKLKALPENIGMLKSLKTLAADKTAIVKLPESIFRLTK 766

Query: 606 LSDLRLQNCKRLQSLPE 622
           L  L L  C  L+ LP+
Sbjct: 767 LERLVLDRCSHLRRLPD 783


>gi|356541551|ref|XP_003539238.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1028

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 231/722 (31%), Positives = 345/722 (47%), Gaps = 121/722 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R  F  HL   L    I TF+DD+ L RG +IS ++  AIE S  +IV
Sbjct: 17  YDVFLSFRGEDTRFGFTGHLYNTLRHRGINTFMDDEALERGEQISEAIFKAIEESGKAIV 76

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS------------- 121
           +FS+ YASS WCL ELVKIL         V P+FY VDPS+  Y  +             
Sbjct: 77  VFSKNYASSTWCLEELVKILSCMKTKELKVYPLFYNVDPSEVRYQRASYGQQLAKHEIKM 136

Query: 122 --------------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                               +GW    D    E   I   V+ +     +L P D  + L
Sbjct: 137 KYSKQKVQNWRLALHEAANLVGWH-FKDGHGYEYEFITRIVDVVGISKPNLLPVD--EYL 193

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ES I +I  +L         VGI G+ GIGKTT+A A+Y++IS  FEGS F+ ++R 
Sbjct: 194 VGIESRIPKIIFRLQMTDPTVIMVGICGVSGIGKTTLAQALYNHISPQFEGSCFLNDVRG 253

Query: 222 ESEKVG------------GLANIHLNFER-------RRLSRMKVLIVFYDLTDLKQIDLL 262
            S K G               NI ++ E        R+L   +VL++  ++  L+Q++ L
Sbjct: 254 SSAKYGLAYLQEGILSDIAGENIKVDNEHKGIPILIRKLHGKRVLLILDNVDKLEQLEYL 313

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G  + F  GSR+IIT+R   +L  H    V ++++V  L Y +++ L S        P 
Sbjct: 314 AGECNWFGLGSRIIITSRCKDVLAAHG---VENIYDVPTLGYYEAVQLLSSKVTTGPVPD 370

Query: 323 AGFLELSNIVIKYANGVPLALQ-----------VLGSYLKGMSEEEWESAVNKLKRMPHM 371
             +  +    +  ++G+PL L+           V+GS L   S +E   A+ + +R+   
Sbjct: 371 Y-YNAIWERAVHCSHGLPLVLKDIGSDLSEKMNVIGSDLSWPSIDELGIALERYERVCDG 429

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           +IQ +LKVSYD L++ E+ IFLD ACFF G     V   L A  F+ +  I+RL+ +SL+
Sbjct: 430 EIQSILKVSYDSLNECEKKIFLDIACFFIGEPVSYVEEILSAIGFNPQHSINRLIDRSLL 489

Query: 432 TI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINL-- 488
           +I S+ ++ MHD +++M  +IV+QE+   P KRSRLW P+D+ QVLNEN  +   + L  
Sbjct: 490 SIDSSGRLMMHDHIKDMAMKIVQQEAPLHPEKRSRLWCPQDVLQVLNENELVVFNLFLLS 549

Query: 489 ---DSLKELYL----GGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSR---- 534
              D ++ + L     G   LK   +   N++ L +   K+     +P  + N  R    
Sbjct: 550 KGSDKIEVMMLVDLPRGNDVLKLSDKAFKNMKSLRMLIIKDAIYSGIPQHLSNSLRVLIW 609

Query: 535 ------------------------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
                                         L  +D T+C  L  V   +  +  LR L L
Sbjct: 610 SGYPSGCLPPDFVKVPSDCLILNNFKNMECLTKMDFTDCEFLSEVPD-ISGIPDLRILYL 668

Query: 565 SGCLKLEKLPEEIGNLESLEYL-NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             C+ L K+ + +G L +LE L  +     + IPS+ K L+ L +L    C RL   PE+
Sbjct: 669 DNCINLIKIHDSVGFLGNLEELTTIGCTSLKIIPSAFK-LASLRELSFSECLRLVRFPEI 727

Query: 624 PC 625
            C
Sbjct: 728 LC 729



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 10/174 (5%)

Query: 469 PEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDL----KETAIEE 524
           P D  +V ++   L    N++ L ++    C  L   P+IS  I DL +        + +
Sbjct: 618 PPDFVKVPSDCLILNNFKNMECLTKMDFTDCEFLSEVPDIS-GIPDLRILYLDNCINLIK 676

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           +  S+G L  L +L    C+ LK + S    L SLR L+ S CL+L + PE +  +E+L+
Sbjct: 677 IHDSVGFLGNLEELTTIGCTSLKIIPSAF-KLASLRELSFSECLRLVRFPEILCEIENLK 735

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHC 634
           YLNL +   E++P S+  L  L  L L  C RL  LP     LP    I A  C
Sbjct: 736 YLNLWQTAIEELPFSIGNLRGLESLNLMECARLDKLPSSIFALPRLQEIQADSC 789



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 27/92 (29%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIG-------- 530
           +P+   L SL+EL    C  L RFPEI C IE+L   +L +TAIEELP SIG        
Sbjct: 701 IPSAFKLASLRELSFSECLRLVRFPEILCEIENLKYLNLWQTAIEELPFSIGNLRGLESL 760

Query: 531 ----------------NLSRLVDLDLTNCSGL 546
                            L RL ++   +C G 
Sbjct: 761 NLMECARLDKLPSSIFALPRLQEIQADSCRGF 792


>gi|357505215|ref|XP_003622896.1| TMV resistance protein N [Medicago truncatula]
 gi|355497911|gb|AES79114.1| TMV resistance protein N [Medicago truncatula]
          Length = 1197

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 194/528 (36%), Positives = 292/528 (55%), Gaps = 83/528 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R  F+SHL  +L    I  F D D++ RG++IS SL  AIE  +ISIV
Sbjct: 344 YDVFLSFRGIDCRAKFISHLYTSLQNAGIHVFKDNDEIQRGDQISFSLLKAIEECRISIV 403

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           + S  YA+SRWC++EL  I++   + G++V+PVFY VDPS+  +                
Sbjct: 404 VLSSNYANSRWCMSELDNIMKVSRREGRMVIPVFYEVDPSEVRHQTGMFGDGFEKLISRI 463

Query: 119 ----CPSLGW-MGIFDIPTSESVLIEGNVN---DISKKL---------SDLFPSDNKDQL 161
                  + W   + ++ ++  V+I  + N   DI K +         ++LF +D+    
Sbjct: 464 PVDKYTKMNWKTALLEVGSTAGVVILNSRNESEDIRKVVAHVTKLLDRTELFVADHP--- 520

Query: 162 VGVESIIKEIESQLLS--GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           VGV+S ++++  QLL+   S +   +GIWG+GGIGKTTIA A Y+ I   F+   F+ N+
Sbjct: 521 VGVDSRVQDV-VQLLNCHESKDPLLLGIWGMGGIGKTTIAKAAYNKIRHDFDAKSFLLNV 579

Query: 220 RDESEKVGG--------LANIHLNFE-------------RRRLSRMKVLIVFYDLTDLKQ 258
           R++ E   G        L++I+   E             + RL + K+ +V  D+    Q
Sbjct: 580 REDWEHDNGQVSLQQRLLSDIYKTTEIKIRTLESGKMILKERLQKKKIFLVLDDVNKEDQ 639

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L G  + F  GSR+IITTRD  LL      +V +V+ +KE+  N+SL LFS +AF Q
Sbjct: 640 LNALCGSHEWFGEGSRIIITTRDDDLLSR---LKVHYVYRMKEMDDNESLELFSWHAFKQ 696

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSY-LKGMSEEEWESAVNKLKRMPHMDIQKVL 377
            +P  GF  LS  V+KY+ G+PLALQV+GS+ L    ++EW S + KLK +P+  + + L
Sbjct: 697 PNPIKGFGNLSTDVVKYSGGLPLALQVIGSFLLTRRRKKEWTSLLEKLKLIPNDKVLEKL 756

Query: 378 KVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           ++S+DGL DD+ + IFLD A FF G +Q  V   L+ C     IGIS LV          
Sbjct: 757 QLSFDGLSDDDMKEIFLDIAFFFIGMNQEEVTTILEHCGHHPDIGISVLVQ--------- 807

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT 484
                   Q MG  IVR++S +   + SRLW  +D++ VL+++T L +
Sbjct: 808 --------QNMGRVIVRKKSREGGKEPSRLWRYKDVHYVLSKDTLLES 847



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 187/336 (55%), Gaps = 45/336 (13%)

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSG--STEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           ++LF +D+    VGVES ++E+  QLL+   S E   +GI G GGIGKTTIA A+Y+ I 
Sbjct: 10  TNLFVADHP---VGVESRVQEV-IQLLNTEPSEETRVIGICGTGGIGKTTIAKAVYNKIH 65

Query: 208 SHFEGSYFMQNIRDESEKVGG--------LANIHLNFERRR--------------LSRMK 245
            HFE   F+ N+R   E+  G        L++I+   + ++              L + +
Sbjct: 66  HHFEAKSFLLNVRQVWEQDNGEVSLQQQLLSDIYKTTDIKKIETVESGKMILQEMLPQKR 125

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           +L+V  ++ +  Q+D L      F  GS +IITTR   +L          V++++ ++ +
Sbjct: 126 MLLVVDNVNEQHQLDALCISCKWFGQGSIIIITTRHSYML-------YYRVYKMEPMNIH 178

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY-LKGMSEEEWESAVNK 364
           +SL LFS  AF Q +P   F +LS  V+   +G+PL+L+V+GS+ L    + EW S + K
Sbjct: 179 ESLELFSLYAFKQPNPIEDFADLSREVVMNCHGLPLSLEVIGSFLLTTRRKTEWNSVLEK 238

Query: 365 LK---RMPHMD---IQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFL-DACRF 416
           L+   RM H+    +Q+++++S+ GL D + +N+FLD A    G DQ  V+  L D+  +
Sbjct: 239 LQQINRMYHLSHARVQEIIRISFHGLRDGDVENMFLDIALNLCGMDQDDVIKILKDSVYY 298

Query: 417 SAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEI 451
           SA+I I  L+ + LVT+ S N+I M+  +Q  G +I
Sbjct: 299 SAEIRIRVLLQRRLVTVDSKNRICMYGPVQHFGRDI 334


>gi|359473396|ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 233/752 (30%), Positives = 357/752 (47%), Gaps = 156/752 (20%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           + DVFLSFRG+D R  F   L   L  + +  F D++ LNRG++I   L  AIE S   I
Sbjct: 20  RWDVFLSFRGEDTRGTFTDCLYTRLQHKGVRAFRDNEGLNRGDKIDRCLLDAIEDSAAFI 79

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------ 115
            I S  YA+SRWCL EL K+ E      ++++PVFY VDPS                   
Sbjct: 80  AIISPNYANSRWCLEELAKVCEC----NRLILPVFYNVDPSHVRGQRGPFLQHFKDLEAR 135

Query: 116 ------AGYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                 + +  ++ ++G     + +    E+ +I+  +N++  +LS    S      VG+
Sbjct: 136 FGEEDVSKWRKAMKYVGGLAGFVVNGFGDEADVIQTLLNNVLAELSKW--SGVAAFTVGL 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S ++E+   L   S     +G++G GG+GK+T+A A+Y+ + +HFE   F+ N++    
Sbjct: 194 DSRVEEVLELLDLKSNSIRVLGLYGPGGVGKSTLAKALYNKLVAHFENRSFISNVKKYLA 253

Query: 225 KVGGLANI-------------HLNFERRRLSRMK-------VLIVFYDLTDLKQIDLLIG 264
           +  GL ++             H+N     L  +K       VLI+  D+ D  Q+  + G
Sbjct: 254 QENGLLSLQIKLIGDLSGMASHVNEVNAGLVAIKSIVQEKRVLIILDDVDDASQLTAIAG 313

Query: 265 R---LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           R      F  GSR+IITTRD ++L     +    ++EVK+L+  +SL LFS  A G+  P
Sbjct: 314 RKKWRKWFYEGSRIIITTRDREVLHELHEN---ELYEVKQLNSPESLQLFSHYALGRVKP 370

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKVLKVS 380
              +L LS  ++    G+PLAL+V GS L    + EEWE A+ KLK++  MD+Q VLK+S
Sbjct: 371 TPDYLPLSKQIVSLTGGLPLALEVFGSSLYDKRKIEEWEDALQKLKQIRPMDLQGVLKIS 430

Query: 381 YDGLDDEEQNIFLDTACFF--KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-K 437
           YDGLD++E+ +FLD AC F   G  +   ++ L  C F A+IGI  LV KSL+ I+ +  
Sbjct: 431 YDGLDEQEKCVFLDIACLFIKMGMKKEDAIDILKGCGFRAEIGIKVLVDKSLLKIAEDYT 490

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLKELY 495
           + MHD L++MG +IV  E+ +D G RSRLW   +I +VL  N  +    G+ LD + +++
Sbjct: 491 LWMHDQLRDMGRQIVLHENHEDLGMRSRLWDRSEILRVLQNNLGSRCIQGMVLDFVSDIF 550

Query: 496 L----GGCSNLKRFPEISCNIEDLDLKETAIEELP----------------SSIGNLSRL 535
           +          +  P  +  +    LKET  E                    S+ NL RL
Sbjct: 551 MKDSAAAWGRFRGTPNFTTAVT--WLKETYKEYFQHAAEKERELILQTKSFESMINL-RL 607

Query: 536 VDLDLTNCSG--------LKSVSSRLCNLKSLRR-------------------------- 561
           + +D     G        LK +  R C LK+L                            
Sbjct: 608 LQIDNVQLEGEFKLMPAELKWLQWRGCPLKTLPSDFCPQGLRVLDLSESKNIERLWGESW 667

Query: 562 -------LNLSGCLKLEKLPE-----------------------EIGNLESLEYLNLAE- 590
                  +NL GC  L  +P+                        IG++ SL +L+L+E 
Sbjct: 668 VGENLMVMNLHGCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSEC 727

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           K+  + PS +  L  L  L L  C +L+ LPE
Sbjct: 728 KNLVEFPSDVSGLKNLQTLILSGCSKLKELPE 759



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 81/136 (59%), Gaps = 3/136 (2%)

Query: 489 DSLKELYLGGCSNLKRFPEISCN--IEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSG 545
           ++L  + L GC NL   P++S N  +E L L+    + ++  SIG++  L+ LDL+ C  
Sbjct: 670 ENLMVMNLHGCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKN 729

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L    S +  LK+L+ L LSGC KL++LPE I  ++SL  L L     EK+P S+ +L++
Sbjct: 730 LVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTR 789

Query: 606 LSDLRLQNCKRLQSLP 621
           L  L L NC+ L+ LP
Sbjct: 790 LERLSLNNCQSLKQLP 805



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 44/286 (15%)

Query: 414  CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG-EIVRQESIKDPGKRSRLWHPEDI 472
            CRF +K+  S     S+V +  +  ++ DL  ++GG + +R+  ++   +   L  PE I
Sbjct: 892  CRFLSKLPASIEGLASMVVLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESL--PEAI 949

Query: 473  YQVLNENT---------SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKE 519
              + + NT          LP  I  L++L  L L  C  L+R P    N++ L    ++E
Sbjct: 950  GSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLPGSIGNLKSLHHLKMEE 1009

Query: 520  TAIEELPSSIGNLSRLV--------DLDLTNCSG--------------LKSVSSRLCNLK 557
            TA+ +LP S G L+ L+         L+L    G              L  + +   NL 
Sbjct: 1010 TAVRQLPESFGMLTSLMRLLMAKRPHLELPQALGPTETKVLGAEENSELIVLPTSFSNLS 1069

Query: 558  SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
             L  L+        K+P++   L SLE LNL   +F  +PSS++ LS L  L L +C+ L
Sbjct: 1070 LLYELDARAWKISGKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSILRKLLLPHCEEL 1129

Query: 618  QSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            ++LP LP     ++A +C +L+ +S+ S L +         N +NC
Sbjct: 1130 KALPPLPSSLMEVNAANCYALEVISDLSNLESLQE-----LNLTNC 1170



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 26/161 (16%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNC 543
           +L +L+ L L  C ++   P+   N++ L    +  + + ELP+SIG+LS L DL + +C
Sbjct: 833 SLTNLERLSLMRCQSIYAIPDSVRNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGHC 892

Query: 544 ----------SGLKSV-------------SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
                      GL S+               ++  LK+LRRL +  C +LE LPE IG++
Sbjct: 893 RFLSKLPASIEGLASMVVLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSM 952

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            SL  L + +    ++P S+ +L  L  L L  CKRL+ LP
Sbjct: 953 GSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLP 993



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 27/138 (19%)

Query: 488 LDSLKELYLGGCSNLKRFPE-ISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L +L+ L L GCS LK  PE IS   ++ +L L  T IE+LP S+  L+RL  L L NC 
Sbjct: 740 LKNLQTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQ 799

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK                        +LP  IG LESL  L+  +   E+IP S   L+
Sbjct: 800 SLK------------------------QLPTCIGKLESLRELSFNDSALEEIPDSFGSLT 835

Query: 605 KLSDLRLQNCKRLQSLPE 622
            L  L L  C+ + ++P+
Sbjct: 836 NLERLSLMRCQSIYAIPD 853



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 26/163 (15%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L  L+ L L  C +LK+ P     +E   +L   ++A+EE+P S G+L+ L  L L  
Sbjct: 785 LRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMR 844

Query: 543 CSGLKSVSSRLCNLK-----------------------SLRRLNLSGCLKLEKLPEEIGN 579
           C  + ++   + NLK                       +L+ L++  C  L KLP  I  
Sbjct: 845 CQSIYAIPDSVRNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGHCRFLSKLPASIEG 904

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           L S+  L L       +P  +  L  L  L ++ CKRL+SLPE
Sbjct: 905 LASMVVLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPE 947


>gi|27764545|gb|AAO23075.1| R 5 protein [Glycine max]
          Length = 907

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 236/728 (32%), Positives = 359/728 (49%), Gaps = 121/728 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEIS 59
           MA+++ S   I    +DVFLSFRG+D R+ F  +L  ALC + I TF D DKL+ G EI+
Sbjct: 1   MAAATRSRASI----YDVFLSFRGEDTRYGFTGNLYKALCDKGIHTFFDEDKLHSGEEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
           P+L  AI+ S+I+I + SE +ASS +CL+EL  IL      G +V+PVFY V P D  + 
Sbjct: 57  PALLKAIQDSRIAITVLSEDFASSSFCLDELATILFCAQYNGMMVIPVFYKVYPCDVRHQ 116

Query: 119 ----------------------------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLS 150
                                         +L  +   D    E   I   V  +S+K++
Sbjct: 117 KGTYGEALAKHKKRFPDKLQKWERALRQVANLSGLHFKDRDEYEYKFIGRIVASVSEKIN 176

Query: 151 DLFPSD--NKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN-- 205
              P+     D  VG+ES ++E+   L  G+ +    +GI G+GGIGK+T+A A+Y++  
Sbjct: 177 ---PASLHVADLPVGLESKVQEVRKLLDVGNHDGVCMIGIHGMGGIGKSTLARAVYNDLI 233

Query: 206 ISSHFEGSYFMQNIRDESEKVGGL------------ANIHLNFERRRLSRM-------KV 246
           I+ +F+G  F++N+R+ S   G               +I +  +++ +S++       KV
Sbjct: 234 ITENFDGLCFLENVRESSNNHGLQHLQSILLSEILGEDIKVRSKQQGISKIQSMLKGKKV 293

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D+   +Q+  + GR D F PGS +IITTRD QLL  H    V   +EV+ L+ N 
Sbjct: 294 LLILDDVDKPQQLQTIAGRRDWFGPGSIIIITTRDKQLLAPHG---VKKRYEVEVLNQNA 350

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L + NAF +      + ++ N V+ YA+G+PLAL+V+GS + G    EW+SAV   K
Sbjct: 351 ALQLLTWNAFKREKIDPSYEDVLNRVVTYASGLPLALEVIGSNMFGKRVAEWKSAVEHYK 410

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGI 422
           R+P+ +I ++LKVS+D L +E++N+FLD AC FKG      ++++    + C    K  I
Sbjct: 411 RIPNDEILEILKVSFDALGEEQKNVFLDIACCFKGCKLTEVEHMLRGLYNNC---MKHHI 467

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
             LV KSL+ + +  + MHDL+Q +G EI RQ S ++PGK  RLW P+DI QVL  NT  
Sbjct: 468 DVLVDKSLIKVRHGTVNMHDLIQVVGREIERQISPEEPGKCKRLWLPKDIIQVLKHNTGT 527

Query: 483 P-----------------------TGINLDSLKELYLGGCSNLK---RFPE--------- 507
                                     + +++LK L +      K    FPE         
Sbjct: 528 SKIEIICLDFSISDKEQTVEWNQNAFMKMENLKILIIRNGKFSKGPNYFPEGLRVLEWHR 587

Query: 508 --ISCNIEDLDLKETAIEELPSS---------IGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
               C   +       I +LP S               L  L   NC  L  +   + +L
Sbjct: 588 YPSKCLPSNFHPNNLLICKLPDSSMASFEFHGSSKFGHLTVLKFDNCKFLTQIPD-VSDL 646

Query: 557 KSLRRLNLSGCLKLEKLPEEIGNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
            +LR L+  GC  L  + + IG L  L+ LN    +     P     L+ L  L+L  C 
Sbjct: 647 PNLRELSFKGCESLVAVDDSIGFLNKLKKLNAYGCRKLTSFPPL--NLTSLETLQLSGCS 704

Query: 616 RLQSLPEL 623
            L+  PE+
Sbjct: 705 SLEYFPEI 712



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 39/216 (18%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
           TS P  +NL SL+ L L GCS+L+ FPEI     NI+ L L++  I+ELP S  NL  L 
Sbjct: 685 TSFPP-LNLTSLETLQLSGCSSLEYFPEILGEMENIKQLVLRDLPIKELPFSFQNLIGLQ 743

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-----LKLEKLPEEIGNLES--------- 582
            L L +C  +  +  RL  +  L +L++  C     ++ E+  E++G++ S         
Sbjct: 744 VLYLWSCL-IVELPCRLVMMPELFQLHIEYCNRWQWVESEEGEEKVGSILSSKARWFRAM 802

Query: 583 ------------------LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                             +EYL+L+  +F  +P   K+L  L  L + +C+ LQ +  LP
Sbjct: 803 NCNLCDDFFLTGSKRFTHVEYLDLSGNNFTILPEFFKELKFLRTLDVSDCEHLQKIRGLP 862

Query: 625 CG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
                  A +C SL T S+ S LL +    +++++ 
Sbjct: 863 PNLKDFRAINCASL-TSSSKSMLLNQVLSFYNVYDL 897



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 31/161 (19%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T +P   +L +L+EL   GC +L                  A+++   SIG L++L  L+
Sbjct: 638 TQIPDVSDLPNLRELSFKGCESL-----------------VAVDD---SIGFLNKLKKLN 677

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
              C  L S      NL SL  L LSGC  LE  PE +G +E+++ L L +   +++P S
Sbjct: 678 AYGCRKLTSFPP--LNLTSLETLQLSGCSSLEYFPEILGEMENIKQLVLRDLPIKELPFS 735

Query: 600 MKQLSKLSDLRLQNCK------RLQSLPELPCGSSIHARHC 634
            + L  L  L L +C       RL  +PEL     +H  +C
Sbjct: 736 FQNLIGLQVLYLWSCLIVELPCRLVMMPEL---FQLHIEYC 773


>gi|357500597|ref|XP_003620587.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|357500703|ref|XP_003620640.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495602|gb|AES76805.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495655|gb|AES76858.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1094

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 235/728 (32%), Positives = 364/728 (50%), Gaps = 122/728 (16%)

Query: 1   MASSS-SSINMIPHPK---HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRG 55
           MASS+ SS+ ++   +   +DVF++FRG+D R+NF   L  AL  + I  F DD  L +G
Sbjct: 1   MASSNNSSLALVTSSRNNYYDVFVTFRGEDTRNNFTDFLFDALETKGIFAFRDDTNLQKG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS- 114
             I P L  AIEGS++ + +FS  YASS WCL EL KI +   +  + ++PVFY VDPS 
Sbjct: 61  ESIEPELLRAIEGSRVFVAVFSRNYASSTWCLQELEKICKCVQRSRKHILPVFYDVDPSV 120

Query: 115 ----DAGYCPSL----------------------------GWMGIFDIPTSESVLIEGNV 142
                  YC +                             GW  + D P +      G +
Sbjct: 121 VRKQSGIYCEAFVKHEQRFQQDFEMVSRWREALKHVGSISGW-DLRDKPQA------GVI 173

Query: 143 NDISKKLSDLFPSDNK---DQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTI 198
             I +K+  +    +      LVG++S I+ +++ LL  S +    +GI G+GGIGKTT+
Sbjct: 174 KKIVQKIMSILECKSSYISKDLVGIDSPIEALKNHLLLDSVDCVCAIGISGMGGIGKTTL 233

Query: 199 ASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFE--------------------- 237
           A A+Y  IS  F  S ++    D+  K+  L +  LN +                     
Sbjct: 234 AMALYDQISHRFSASCYI----DDVTKIYSLHDGPLNAQKQILFQTLGIEHHLISNRYNA 289

Query: 238 ----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
               RRRL R KVL++  ++ +++Q++ +    +    GSR+++ +RD  +LK +    V
Sbjct: 290 TDLIRRRLRREKVLLILDNVNEVEQLEKIAVHREWLGAGSRIVVISRDEHILKEYG---V 346

Query: 294 GHVFEVKELSYNDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
              ++V  L+  +S  LF R AF  +N     +  L++ ++ YANG+PLA+ +LGS+L G
Sbjct: 347 DVFYKVPLLNMAESHKLFCRKAFKLENIILGNYQNLADEILSYANGLPLAITILGSFLFG 406

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            +  EW+SA+ +L+  P+ D+  VL +S+DGL++ EQ IFLD ACFF       V N L+
Sbjct: 407 RNVTEWKSALARLRESPNKDVMNVLHLSFDGLEETEQEIFLDIACFFNSWPMEEVKNILN 466

Query: 413 ACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI 472
            C F A IG+  L  KSL+  + + I +H LL+E+G +IV++ S K+  K SR+W  + +
Sbjct: 467 CCGFHADIGLRVLNDKSLINTNYSHIEIHSLLEELGRKIVQENSSKEQRKWSRVWSKKQL 526

Query: 473 YQVLNENTS-------LPTGINLDS--------LKELYL--GGC---------SNLKR-- 504
           Y V+ EN         L   I++++        L+ L    GGC         + LK   
Sbjct: 527 YNVMVENMQKHVEAIVLNEEIDMNAEHVSKMNNLRFLIFKYGGCISGSPWSFSNKLKYVD 586

Query: 505 -----FPEISCNIE-----DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC 554
                F  +  N       +L LK + IE+L ++   L  L  LDL +   L  +     
Sbjct: 587 WHEYPFKYLPSNFHPNELVELILKSSKIEQLWTNKKYLPNLKHLDLRHSLELVKILD-FG 645

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQN 613
              +L +LNL GC+ L +L   IG L  L YLNL E K+   IP+++  LS L DL +  
Sbjct: 646 EFPNLEKLNLEGCINLVELDPSIGLLRKLVYLNLYECKNLVSIPNNIFSLSSLEDLNMYG 705

Query: 614 CKRLQSLP 621
           C ++   P
Sbjct: 706 CSKVFKNP 713



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 6/84 (7%)

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L S+ S +C    LR +++S C  L ++P+ I  L SLE LNL   +F  +PS +++LSK
Sbjct: 757 LPSLHSLVC----LRDVDISFC-HLSQVPDAIECLYSLERLNLEGNNFVTLPS-LRKLSK 810

Query: 606 LSDLRLQNCKRLQSLPELPCGSSI 629
           L  L LQ+C  L+SLP+LP  ++I
Sbjct: 811 LVYLNLQHCMLLESLPQLPSPTNI 834


>gi|351727991|ref|NP_001235644.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452593|gb|ACM89623.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 1552

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 227/705 (32%), Positives = 346/705 (49%), Gaps = 109/705 (15%)

Query: 15   KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
            ++DVF+SFRG+D R++F   L  AL ++ IE F DDK + +G  I+P L  AIEGS + +
Sbjct: 473  EYDVFVSFRGEDTRNSFTGFLFEALKKQGIEAFKDDKDIRKGESIAPELIRAIEGSHVFL 532

Query: 74   VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
            V+FS+ YASS WCL EL  I +   K  + ++P+FY VDPS        Y  +       
Sbjct: 533  VVFSKDYASSTWCLRELAHIWDCIQKSPRHLLPIFYDVDPSQVRKQSGDYEKAFAQHQQS 592

Query: 124  ----------WMGI---------FDIPTSES-VLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                      W  +         +DI   +   +IE  V  I   L   F +   D LVG
Sbjct: 593  SRFEDKEIKTWREVLNDVGNLSGWDIKNKQQHAVIEEIVQQIKNILGCKFSTLPYDNLVG 652

Query: 164  VESIIKEIESQLLSG--STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM----- 216
            +ES    +   +  G  + +   VGI G+GGIGK+T+  A+Y  IS  F    ++     
Sbjct: 653  MESHFATLSKLICLGLVNDDVRVVGITGMGGIGKSTLGQALYERISHQFNSRCYIDDVSK 712

Query: 217  ----------------QNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
                            Q++ +++ K+  ++N  L     RLS  K LI+  ++   KQ+D
Sbjct: 713  LYQGYGTLGVQKELLSQSLNEKNLKICNVSNGTL-LVWERLSNAKALIILDNVDQDKQLD 771

Query: 261  LLIGRLDGFV-----PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
            +  G  +  +      GS VII +RD Q+LK H    V  ++ V+ L+ ND+L LF + A
Sbjct: 772  MFTGGRNDLLRKCLGKGSIVIIISRDQQILKAH---GVDVIYRVEPLNDNDALGLFCKKA 828

Query: 316  FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
            F  N+  + F +L++ V+ +  G PLA++VLGS L       W SA+  L+      I  
Sbjct: 829  FKNNYMMSDFEKLTSDVLSHCQGHPLAIEVLGSSLFDKDVLHWRSALALLRENKSKSIMN 888

Query: 376  VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
            VL++S+D L+D  + IFLD ACFF       V   LD   F+ + G+  LV KSL+T+ +
Sbjct: 889  VLRISFDQLEDTHKEIFLDIACFFNHYPVKYVKEVLDFRGFNPEYGLQVLVDKSLITMDS 948

Query: 436  NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELY 495
             +I MHDLL ++G  IVR++S + P K SRLW  +DI +V+++N +       D+++ ++
Sbjct: 949  RQIQMHDLLCDLGKYIVREKSPRKPWKWSRLWDVKDILKVMSDNKA------ADNVEAIF 1002

Query: 496  LGGCSNLKR---------FPEISC---------------------------NIEDLDLKE 519
            L   S++ R            +SC                            +  L  ++
Sbjct: 1003 LIEKSDILRTISTMRVDVLSTMSCLKLLKLDHLDFNVKINFFSGTLVKLSNELGYLGWEK 1062

Query: 520  TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
               E LP S     +LV+L L   S +K +      L +LRRL+LSG   L K+P  IG+
Sbjct: 1063 YPFECLPPSF-EPDKLVELILPK-SNIKQLWEGTKPLPNLRRLDLSGSKNLIKMP-YIGD 1119

Query: 580  LESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
               LE L+L      E+I  S+    KL+ L L+NCK L  LP+ 
Sbjct: 1120 ALYLESLDLEGCIQLEEIGLSIVLSPKLTSLNLRNCKSLIKLPQF 1164



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 10/148 (6%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD-LKETAIEELPSSIGNLSRLVD 537
             SLP  I  L+SL++L L GCS L    E+   + D + LK+  I+  P    + S    
Sbjct: 1206 VSLPNSILGLNSLEDLNLSGCSKLYN-TELLYELRDAEQLKKIDIDGAPIHFQSTSSYSR 1264

Query: 538  LDLTNCSGLKSVSSRL-CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
                + S L   S    C LK    L+LS C  L ++P+ IG +  L+ L+L+  +F  +
Sbjct: 1265 EHKKSVSCLMPSSPIFPCMLK----LDLSFC-NLVEIPDAIGIMCCLQRLDLSGNNFATL 1319

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            P+ +K+LSKL  L+LQ+CK+L+SLPELP
Sbjct: 1320 PN-LKKLSKLVCLKLQHCKQLKSLPELP 1346



 Score = 43.9 bits (102), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 10/163 (6%)

Query: 459  DPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI--SCNIEDLD 516
            +P K   L  P+   + L E T       L +L+ L L G  NL + P I  +  +E LD
Sbjct: 1073 EPDKLVELILPKSNIKQLWEGTK-----PLPNLRRLDLSGSKNLIKMPYIGDALYLESLD 1127

Query: 517  LKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            L+    +EE+  SI    +L  L+L NC  L  +     +L  L +L L GC KL  +  
Sbjct: 1128 LEGCIQLEEIGLSIVLSPKLTSLNLRNCKSLIKLPQFGEDL-ILEKLLLGGCQKLRHIDP 1186

Query: 576  EIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
             IG L+ L  LNL   K+   +P+S+  L+ L DL L  C +L
Sbjct: 1187 SIGLLKKLRRLNLKNCKNLVSLPNSILGLNSLEDLNLSGCSKL 1229


>gi|224113819|ref|XP_002332483.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832734|gb|EEE71211.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 504

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 195/523 (37%), Positives = 269/523 (51%), Gaps = 82/523 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG+D R NF  HL  AL    I TF DD ++ RG  I   L  AI+ SKISI+
Sbjct: 1   YQVFLSFRGEDTRRNFTDHLYKALVDAGIHTFRDDDEIRRGESIDFELQMAIQQSKISII 60

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           +FS  YASSRWCL+ELV I+E K     IV+PVFY VDPS  G                 
Sbjct: 61  VFSIDYASSRWCLDELVMIMERKRNDDCIVLPVFYDVDPSQVGRQTGSFAATFVEHEKSF 120

Query: 119 ----------------CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSD-LF--PSDNKD 159
                              L  M + D    E+  ++  V  +SKKL   +F  P     
Sbjct: 121 NEDMERVNRWRIALKEVADLAGMVLGD--GYEAQFVQSIVEKVSKKLDQKMFHLPL---- 174

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
             +G + ++  I S L  GS +     ++GIGG+GKT IA ++++     FEG  F+ N 
Sbjct: 175 HFIGRDPLVNYINSWLQEGSHDAAIAILYGIGGVGKTIIAKSVFNQNIHKFEGKSFLSNF 234

Query: 220 R------------------------DESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTD 255
           R                        DE E   G+  I     +  L   K LIV  D+  
Sbjct: 235 RSKDIVCLQRQLLSDILKKTIDEINDEDE---GILKI-----KDALCCRKTLIVLDDVDK 286

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
             Q + +IG  +    GS++I+TTR+  L   +   RV   F+V+ L    SL LFS NA
Sbjct: 287 RDQFNKIIGMQNWLCKGSKIIVTTRNKGLFSANDIERVE--FKVEPLDNEKSLELFSWNA 344

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
           FGQ  P  GF+E S  ++ + NG+PLAL+V+GS L G   E WESA+ +++ + + ++QK
Sbjct: 345 FGQADPVDGFVEDSWRIVHHCNGLPLALRVIGSLLSGKGREIWESALQQMEVILNFEVQK 404

Query: 376 VLKVSYDGLD-DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
           VL++SYD LD D  +N+FLD ACFF G D    +  LD     A+ GI  L+ + LV I+
Sbjct: 405 VLRISYDFLDGDYPKNLFLDIACFFNGMDVDDAVRILDGLDKGARFGIDNLIDRCLVEIN 464

Query: 435 NN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           N+ ++ MH L+++MG EI RQES     K  R+W  ED + VL
Sbjct: 465 NDQRLWMHQLVRDMGREIARQEST----KCQRIWRHEDAFTVL 503


>gi|255587945|ref|XP_002534449.1| transferrin, putative [Ricinus communis]
 gi|223525271|gb|EEF27935.1| transferrin, putative [Ricinus communis]
          Length = 597

 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 167/414 (40%), Positives = 234/414 (56%), Gaps = 60/414 (14%)

Query: 80  YASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSESVLIE 139
           YASS W L+ELVKI+E K   GQ V+PVFY VDP+D             D         +
Sbjct: 222 YASSSWSLDELVKIVECKETIGQKVLPVFYQVDPTDVQELTG----SFADAFVKHRKEFK 277

Query: 140 GNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE--FNTVGIWGIGGIGKTT 197
            N++ + K    L    N   L G +S + + ES+L+          + +WG+ GIGKTT
Sbjct: 278 HNLDKVEKWSQALMEIAN---LKGWDSQVIKPESKLIEEIVADISKKLSVWGMAGIGKTT 334

Query: 198 IASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLK 257
           IA AI+  IS+ FEG +F+ ++R+E ++              +LS+ K+LIV  D+T  +
Sbjct: 335 IAGAIFDRISAEFEGKFFVPDVREELKRA----------RWNKLSKKKILIVLDDVTSSQ 384

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+  LIG L  +  G+R+I+T+RD Q+LKN        ++EVK+L+Y+++L LF  +AF 
Sbjct: 385 QLKSLIGELSLYGLGTRIIVTSRDKQVLKNG----CTKIYEVKKLNYSEALYLFRIHAFK 440

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           QNHP  G +ELS   + YA G+PLAL+VLGS L     EEWES + KL+  P M+IQ +L
Sbjct: 441 QNHPTEGLMELSKRSVNYAKGIPLALKVLGSDLCDQGIEEWESELAKLQGSPKMEIQNIL 500

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           K+SYDGLD+ E+NIFLD ACFFKG                                   +
Sbjct: 501 KISYDGLDENEKNIFLDIACFFKG-----------------------------------E 525

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           + MH+LLQ+MG  IV Q+ IK PGKRSRLW+ +DIY VL ++  +    GI+ D
Sbjct: 526 LGMHNLLQQMGKRIVYQQCIKQPGKRSRLWNYKDIYHVLTKDKGIEAVEGISAD 579


>gi|30684793|ref|NP_849410.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658793|gb|AEE84193.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 231/714 (32%), Positives = 340/714 (47%), Gaps = 125/714 (17%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVF+SFRG D RH+F SHL   L  + I+ F D KL RG E    L   IE SK+SIV+F
Sbjct: 18  DVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKL-RGGEYISLLFDRIEQSKMSIVVF 76

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPT---- 132
           SE YA+S WCL E+ KI++ + ++   V+P+FY V  SD     +  +  +F  PT    
Sbjct: 77  SEDYANSWWCLEEVGKIMQRRKEFNHGVLPIFYKVSKSDVSN-QTGSFEAVFQSPTKIFN 135

Query: 133 ----------------------------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                                       SE   ++  V +  + L++L P    D L G+
Sbjct: 136 GDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKNTFRMLNELSPCVIPDDLPGI 195

Query: 165 ESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ES  KE+E  L+  + E    VG+ G+ GIGKTT+A  +Y      F+G  F+++I D S
Sbjct: 196 ESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNS 255

Query: 224 EKVG-------------GLANIHLNFERRR---LSRMKVLIVFYDLTDLKQIDLLIGRLD 267
           ++ G                N+ +  + R    L   K+ IV  ++T+ KQI+ LIG+ +
Sbjct: 256 KRYGLPYLYQKLLHKLLDGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKN 315

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            +  GSR++I TRD +LL+ +  +     + V  L+  +++ LF    FG ++P   F++
Sbjct: 316 VYRQGSRIVIITRDKKLLQKNADA----TYVVPRLNDREAMELFCLQVFGNHYPTEEFVD 371

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LSN  + YA G+PLAL++LG  L       W+  +  L+  P  ++QK LK SY  LDD+
Sbjct: 372 LSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELKSSYKALDDD 431

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           ++++FLD ACFF+      V + L +    AK  +  L  K LVTIS ++I MHDLL  M
Sbjct: 432 QKSVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTISYDRIEMHDLLHAM 491

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-------------------LPTGIN- 487
           G EI +++SI+  G+R RLW+ +DI  +L  NT                     P     
Sbjct: 492 GKEIGKEKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTM 551

Query: 488 LDSLKEL--------------YLGGCSNL-KRFPE-----------ISCNIEDLDLKE-- 519
           L  LK L              ++  CS +   FP+             C   D D KE  
Sbjct: 552 LSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELV 611

Query: 520 ------TAIEELPSSIGNLS--RLVDL----DLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
                 + I++L     N    R VDL    DL N SGL          K+L RL+L GC
Sbjct: 612 DLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRA-------KNLERLDLEGC 664

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
             L+ L   +  +  L YLNL +    E +P   K +  L  L L  C +L+  
Sbjct: 665 TSLDLLG-SVKQMNELIYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDF 716



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP G  + SLK L L GC  LK F  IS +IE L L+ TAIE +   I +L  L+ L+L
Sbjct: 692 SLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLHLEGTAIERVVEHIESLHSLILLNL 751

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK + + L  LKSL+ L LSGC  LE LP     +E LE L +     ++ P   
Sbjct: 752 KNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTP--- 808

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            ++S LS+L++  C   + + +   G  + A  C SL+ +S   T+   + +    F F+
Sbjct: 809 -EMSCLSNLKI--CSFCRPVIDDSTGLYLDAHGCGSLENVSKPLTIPLVTERMHTTFIFT 865

Query: 661 NC 662
           +C
Sbjct: 866 DC 867



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 6/137 (4%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           N +SL+ + LG   +L     +S   N+E LDL+     +L  S+  ++ L+ L+L +C+
Sbjct: 629 NTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCT 688

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S+      +KSL+ L LSGCLKL+     I + ES+E L+L     E++   ++ L 
Sbjct: 689 SLESLPKGF-KIKSLKTLILSGCLKLKDF--HIIS-ESIESLHLEGTAIERVVEHIESLH 744

Query: 605 KLSDLRLQNCKRLQSLP 621
            L  L L+NC++L+ LP
Sbjct: 745 SLILLNLKNCEKLKYLP 761


>gi|356514970|ref|XP_003526174.1| PREDICTED: TMV resistance protein N [Glycine max]
          Length = 1113

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 221/712 (31%), Positives = 345/712 (48%), Gaps = 111/712 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG+D R+NF + L  AL    I  F DD  L +G  I+P L  AI+ S++ +V
Sbjct: 23  YDVFVSFRGEDTRNNFTAFLFDALFENGIHAFKDDTHLQKGESIAPELLLAIQESRLFLV 82

Query: 75  IFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPSDAGYCPSLGWMGI------ 127
           +FS+ YASS WCL EL  I           V+P+FY VDPS+       G+ GI      
Sbjct: 83  VFSKNYASSTWCLRELAHICNCTIEPSSSRVLPIFYDVDPSEVR--KQSGYYGIAFAEHE 140

Query: 128 ----------------------------FDIPT-SESVLIEGNVNDISKKLSDLFPSDNK 158
                                       +DI   S+  +I+  V  I  +L   F +   
Sbjct: 141 RRFREDIEKMEEVQRWREALIQVANISGWDIQNESQPAMIKEIVQKIKCRLGSKFQNLPN 200

Query: 159 DQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
             LVG+ES +KE+E  L L   ++   VGI G+GGIGKTT+ASA+Y  I+  F+   F+ 
Sbjct: 201 GNLVGMESRVKELEKCLKLESVSDVRVVGISGMGGIGKTTLASALYEKIAYQFDFHCFVD 260

Query: 218 NIRDESEKVGGL--------------------ANIHLNFERRRLSRMKVLIVFYDLTDLK 257
           ++     + G L                    A++       RL   + LIVF ++  ++
Sbjct: 261 DVNYIYRRSGSLGVQKQLLSQCLNDKNLEICNASVGTYLIGTRLRNKRGLIVFDNVNQVE 320

Query: 258 QIDLLIGR-----LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
           Q+ +  G      L+    GSR+II +RD  +L+ H    V HV+EV+ L  ++++ LF 
Sbjct: 321 QLRMFTGSRETLLLECLGGGSRIIIISRDEHILRTHG---VHHVYEVQPLEDDNAVQLFC 377

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
           +NAF  ++  + +  L+  V+ +A+G PLA++V+G  L G +  +W   + +L      D
Sbjct: 378 KNAFKCDYIMSDYKMLTYDVLSHADGHPLAIEVIGKSLHGRNVSQWRGILVRLSDNKSKD 437

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGND-QYLVMNFLDACRFSAKIGISRLVGKSLV 431
           I  VL++SYD L++ ++ IFLD ACFF  +  ++     LD   F+ +IG+  LV KSL+
Sbjct: 438 IMDVLRISYDDLEENDREIFLDIACFFDQDYFEHCEEEILDFRGFNPEIGLQILVDKSLI 497

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD 489
           TI + +I MH LL+++G  IVR++S K+P K SRLW  ED+Y+V++ N        I +D
Sbjct: 498 TIFDGRIYMHSLLRDLGKCIVREKSPKEPRKWSRLWECEDLYKVMSNNMEAKNLEAIVVD 557

Query: 490 SLKELYLGGCSNL-----------KRFPEIS----------CNIEDLDLKETAIEELPSS 528
               ++      +            + PE            C     D     +  L + 
Sbjct: 558 DKSWMFFNTIMRVDALSKMKNLKLLKLPEYDSLYGDEEEELCTYTKKDFFSGNLNYLSNE 617

Query: 529 IGNL----------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
           +G L                  L +LDL+  S ++ +      + +LRRLN+S C  L +
Sbjct: 618 LGYLIWQCYPFNSLPQCFQPHNLFELDLS-WSSIQHLWDSTQPIPNLRRLNVSYCKYLIE 676

Query: 573 LPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +P   G   +L +LNL       +I  S+  L KL+ L L++CK L +LP  
Sbjct: 677 VP-NFGEALNLYWLNLEGCVQLRQIHPSIGHLRKLTALNLKDCKSLVNLPHF 727



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 23/164 (14%)

Query: 483 PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS---SIGNLSRLVDLD 539
           P+  +L  L  L L  C +L   P     +   +L     EEL     SIG L +L  L+
Sbjct: 702 PSIGHLRKLTALNLKDCKSLVNLPHFVEELNLEELNLKGCEELRQIDPSIGRLRKLTALN 761

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
           LT+C  L ++   + +L +L+ LNL GC++L ++   IG+L  L  LNL + K    +P 
Sbjct: 762 LTDCKSLVNLPHFVEDL-NLQELNLKGCVQLRQIHSSIGHLRKLTALNLIDCKSLVNLPH 820

Query: 599 SMKQLS------------------KLSDLRLQNCKRLQSLPELP 624
            ++ L+                  KL  L LQ+CKRL+ LPELP
Sbjct: 821 FVEDLNLEELNLKGCEELSLKELSKLLHLNLQHCKRLRYLPELP 864



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 25/137 (18%)

Query: 511 NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           N+ +LDL  ++I+ L  S   +  L  L+++ C  L  V +      +L  LNL GC++L
Sbjct: 639 NLFELDLSWSSIQHLWDSTQPIPNLRRLNVSYCKYLIEVPN-FGEALNLYWLNLEGCVQL 697

Query: 571 EKLPEEIGNLESLEYLNLAE------------------------KDFEKIPSSMKQLSKL 606
            ++   IG+L  L  LNL +                        ++  +I  S+ +L KL
Sbjct: 698 RQIHPSIGHLRKLTALNLKDCKSLVNLPHFVEELNLEELNLKGCEELRQIDPSIGRLRKL 757

Query: 607 SDLRLQNCKRLQSLPEL 623
           + L L +CK L +LP  
Sbjct: 758 TALNLTDCKSLVNLPHF 774


>gi|42562922|ref|NP_176590.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196067|gb|AEE34188.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 997

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 226/712 (31%), Positives = 352/712 (49%), Gaps = 118/712 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR +F+SH         I  F D ++ RG  ISP+L+ AI  S+ISIV
Sbjct: 13  RYRVFTSFHGSDVRTSFLSHFRKQFNNNGITMFDDQRILRGETISPALTQAIRESRISIV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           + S+ YASS WCL+EL++IL+ K+  GQIV+ VFY VDPSD                   
Sbjct: 73  LLSKNYASSGWCLDELLEILKCKDDMGQIVMTVFYGVDPSDVRKQTGEFGIAFNETCACR 132

Query: 117 ------GYCPSLGWMGIFDIP-------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                  +  +L ++G  +I         +E+ +IE    D+S+KL ++ P  + D +VG
Sbjct: 133 TEEERQKWSQALNYVG--NIAGEHLLNWDNEAKMIEKIARDVSEKL-NVTPCRDFDGMVG 189

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +E+ +++I+S L   + E   V I G  GIGK+TI  A++S +S+ F  + F+ N+R  S
Sbjct: 190 IEAHLRKIQSLLDLDNDEVKMVAISGPAGIGKSTIGRALHSLLSNRFHHTCFVDNLRG-S 248

Query: 224 EKVG----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
             +G                      G    HL   + RL  MKV I+  D+ D+KQ++ 
Sbjct: 249 HPIGLDEYGLKLRLQEQLLSKILNQDGSRICHLGAIKERLCDMKVFIILDDVNDVKQLEA 308

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L    + F PGSR+I+TT + +LLK H    + + + V   S  +++ +  R AF Q+  
Sbjct: 309 LANESNWFGPGSRIIVTTENKELLKQHG---INNTYYVGFPSDEEAIKILCRYAFRQSSS 365

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF +L+  V +    +PL L+V+GS L G +EEEWE  + +L+ +   DI++VL+V Y
Sbjct: 366 RHGFKKLTRSVTELCGKLPLGLRVVGSSLHGKNEEEWEYVIRRLETIIDRDIEQVLRVGY 425

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITM 440
           + L + EQ++FL  A FF   D  LV   L       +  ++ LV KSL+ IS + +I M
Sbjct: 426 ESLHENEQSLFLHIAIFFNYEDGDLVKAMLAENDLDIEHELNILVNKSLIYISTDGRIRM 485

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL---------PTGINLDSL 491
           H LLQ +G +  ++E   +P KR  L   ++I  VL  +             +GIN  S+
Sbjct: 486 HKLLQLVGRQANQRE---EPWKRRILIDAQEICHVLENDIGTGAVSGILFDTSGINEVSI 542

Query: 492 KELYLGGCSNLK---------------------RFP-----------EISC--------N 511
               L    NL+                      FP              C        N
Sbjct: 543 SNKALRRMCNLRFLSVYKTKHDGYNRMDIPEDMEFPPRLRLLHWDAYPSKCLPLKFRAEN 602

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           + +LD+K++ +E L      L++L  L+L     LK +   L N  +L  L+LS CL L 
Sbjct: 603 LVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPD-LSNATNLEMLDLSVCLALA 661

Query: 572 KLPEEIGNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +LP  I NL  L+  Y++L E     IP+++  L+ L  + +  C +L++ P
Sbjct: 662 ELPSSIKNLHKLDVIYMDLCE-SLHMIPTNI-NLASLETMYMTGCPQLKTFP 711



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 97/194 (50%), Gaps = 36/194 (18%)

Query: 472 IYQVLNENTSL-PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
           IY  L E+  + PT INL SL+ +Y+ GC  LK FP  S  I+ L L  T +EE+P+SI 
Sbjct: 676 IYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFPAFSTKIKRLYLVRTGVEEVPASIT 735

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
           + SRL+ +DL+    LKS++                      LP       SL+ L+L+ 
Sbjct: 736 HCSRLLKIDLSGSRNLKSIT---------------------HLPS------SLQTLDLSS 768

Query: 591 KDFEKIPSS-MKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLT 648
            D E I  S +K L +L  LRL  C++L+SLPELP     + A  C SL+ ++      T
Sbjct: 769 TDIEMIADSCIKDLQRLDHLRLCRCRKLKSLPELPASLRLLTAEDCESLERVTYPLNTPT 828

Query: 649 RSSKHWDIFNFSNC 662
                    NF+NC
Sbjct: 829 GQ------LNFTNC 836


>gi|357500665|ref|XP_003620621.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495636|gb|AES76839.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1057

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 230/711 (32%), Positives = 357/711 (50%), Gaps = 119/711 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R+NF   L  AL  + I  F D   L +G  I P L  AIE S++ + 
Sbjct: 20  YDVFVTFRGEDTRNNFTDFLFDALETKGIMVFRDVINLQKGECIGPELFRAIEISQVYVA 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG-----YCPSL------- 122
           IFS+ YASS WCL EL KI E     G+ V+PVFY VDPS+       Y  +        
Sbjct: 80  IFSKNYASSTWCLQELEKICECIKGSGKHVLPVFYDVDPSEVRKQSGIYSEAFVKHEQRF 139

Query: 123 ---------------------GWMGIFDIPTSESV--LIEGNVNDISKKLSDLFPSDNKD 159
                                GW  + D P +  +  +++  +N +  K S +    +KD
Sbjct: 140 QQDSMKVSRWREALEQVGSISGW-DLRDEPLAREIKEIVQKIINILECKYSCV----SKD 194

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
            LVG++S I+ +++ LL  S +    +GI G+GGIGKTT+A+ +Y  IS  F  S F+  
Sbjct: 195 -LVGIDSPIQALQNHLLLNSVDGVRAIGICGMGGIGKTTLATTLYGQISHQFSASCFI-- 251

Query: 219 IRDESEKVGGLANIHLNFER-------------------------RRLSRMKVLIVFYDL 253
             D+  K+ GL +  L+ ++                         R+L   + L++  ++
Sbjct: 252 --DDVTKIYGLHDDPLDVQKQILFQTLGIEHQQICNRYHATTLIQRKLCHERTLMILDNV 309

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             ++Q++ +    +   PGSR+II +RD  +LK +    V  V++V  L +N++  LF R
Sbjct: 310 DQVEQLEKIAVHREWLGPGSRIIIISRDEHVLKAYG---VDVVYKVSLLDWNEAHMLFCR 366

Query: 314 NAF-GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
            AF  +    + +  L + ++ YA G+PLA++VLGS+L G +  EW+SA+ +L++ P  D
Sbjct: 367 KAFKDEKIIMSNYQNLVDQILHYAKGLPLAIKVLGSFLFGRNVTEWKSALTRLRQSPVKD 426

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           +  VL++S+DGL++ E++IFL  ACFF  + +  V N L+ C F A IG+  L+ KSLV+
Sbjct: 427 VMDVLQLSFDGLNETEKDIFLHIACFFNNDSEEDVKNILNCCGFHADIGLRVLIDKSLVS 486

Query: 433 ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLK 492
           IS + I MH LL+E+G +IV+  S K+P K SRLW  E +Y V+ EN        +   K
Sbjct: 487 ISYSIINMHSLLEELGRKIVQNSSSKEPRKWSRLWSTEQLYDVMLENMEKHVEAIVLYYK 546

Query: 493 E------LYLGGCSNLKR------------FPEISCN----------------------- 511
           E       +L   SNL+             FP    N                       
Sbjct: 547 EDEEADFEHLSKMSNLRLLFIANYISTMLGFPSCLSNKLRFVHWFRYPSKYLPSNFHPNE 606

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           + +L L E+ I++L  +   L  L  LDL +   L+ +        +L RL+L GC+ L 
Sbjct: 607 LVELILTESNIKQLWKNKKYLPNLRTLDLRHSRNLEKIID-FGEFPNLERLDLEGCINLV 665

Query: 572 KLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +L   IG L  L YLNL + K    IP+++  LS L  L +  C ++ + P
Sbjct: 666 ELDPSIGLLRKLVYLNLKDCKSLVSIPNNIFGLSSLQYLNMCGCSKVFNNP 716



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 19/153 (12%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPE-------ISCNIEDLDLKETAIEELPSSIGN 531
            S+P  I  L SL+ L + GCS +   P         S   +  D++E+A   LP     
Sbjct: 689 VSIPNNIFGLSSLQYLNMCGCSKVFNNPRRLMKSGISSEKKQQHDIRESASHHLPGL--- 745

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
             + + L   +   L S+ S  C    LR++++S C  L  +P+ I  L  LE LNLA  
Sbjct: 746 --KWIILAHDSSHMLPSLHSLCC----LRKVDISFCY-LSHVPDAIECLHWLERLNLAGN 798

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           DF  +PS +++LSKL  L L++CK L+SLP+LP
Sbjct: 799 DFVTLPS-LRKLSKLVYLNLEHCKLLESLPQLP 830


>gi|317415954|emb|CAR94519.1| nematode resistance-like protein [Prunus cerasifera]
          Length = 1625

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 254/782 (32%), Positives = 379/782 (48%), Gaps = 162/782 (20%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSK 70
           P PK++VFLSFRG D    F  +L  AL    I TF+D ++L  G  +S  L  A E S 
Sbjct: 19  PPPKYEVFLSFRGLDTGKGFTDNLYKALIHYGIHTFMDAEQLESGEPVSTELFKATEESL 78

Query: 71  ISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDA------------- 116
           IS++I S  YA+S WCLNELV ++E ++N   ++V+PVFY V PS A             
Sbjct: 79  ISVIILSTKYATSTWCLNELVTMVELAENNESRLVLPVFYDVTPSKARKQIGVHFEEEFA 138

Query: 117 ----------------GYCPSLGWMGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNK 158
                                +  +  +DI    +E+++IE  V  I   L + F +D K
Sbjct: 139 QHNDIEGEPGKVARWKKSLTEIANLSGYDIRNYRNEAIVIEEIVERIFGVLINTFSNDLK 198

Query: 159 DQLVGVESIIKEIESQ--LLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           D  VG++ +  EI+S+  L   S E   +GI GI GIGK+T+A A+   I S F+   F+
Sbjct: 199 D-FVGMDRV-NEIKSKMSLCMDSEEVRVIGICGIPGIGKSTVAKALSQRIRSQFDAISFI 256

Query: 217 QNIRDESEKVGGLANI------HLNFER-----------RRLSRMKVLIVFYDLTDLKQI 259
             +   S+K  GL +I      HL  ++           +RL   +VLI+  ++ +L+QI
Sbjct: 257 SKVGQISKK-KGLFHIKKQLCDHLLDKKVTTKDVDDVICKRLRDKRVLIILDNVDELEQI 315

Query: 260 DLLIGRLDG-----FVPGSRVIITTRDVQLL--KNHRGSRVGHVFEVKELSYNDSLTLFS 312
             + G         F  GSR+I+TT D +LL   NHR      ++++++L+ + +L LF 
Sbjct: 316 KAVAGNDSAGLSNRFGKGSRIIVTTTDERLLIYYNHR-----EIYKIEKLTPDQALLLFC 370

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
           R A   +HP   F +LSN  + Y +G PLAL+V G  L+   E+ W + +  LK   +  
Sbjct: 371 RKALKTDHPTDAFKKLSNEFVDYIDGHPLALEVFGRSLRDRKEDYWSTKLKSLKDNNYSG 430

Query: 373 IQK---VLKVSYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
            +K   VLK S+DGL+++EQ ++FLDTACFFKG D   +    ++C +   I I  L  K
Sbjct: 431 EEKIIGVLKASFDGLENQEQKDMFLDTACFFKGKDVCRLGKIFESCGYHPGINIDILCEK 490

Query: 429 SLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI 486
            L+++   K+ MHDLLQ+MG +IVR ES K+ G+RSRLWH      VL +N    T  GI
Sbjct: 491 YLISMVGGKLWMHDLLQKMGRDIVRGESKKE-GERSRLWHHTVALPVLKKNKGTKTVEGI 549

Query: 487 ------------------NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS 528
                             N+D+L+ L +           +S  +  L+  +  ++ LPSS
Sbjct: 550 FLSSSQPDKVHLKKDPFSNMDNLRLLKIYNVEFSGCLEYLSDELSLLEWHKCPLKSLPSS 609

Query: 529 -------------------------------IGNLS------RLVDLD---------LTN 542
                                          + NLS      +  D D         L  
Sbjct: 610 FEPDKLVELNLSESEIEELWEEIERPLEKLAVLNLSDCQKLIKTPDFDKVPNLEQLILQG 669

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C+ L +V   + NL+SL    LSGC KL+KLPE   +++ L  L++     E++P+S+  
Sbjct: 670 CTSLSAVPDNI-NLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHVDGTAIEELPTSINH 728

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           L+ L+ L L++CK L SLP++          CTSL +L               I N S C
Sbjct: 729 LNGLTLLNLRDCKSLLSLPDVI---------CTSLTSLQ--------------ILNVSGC 765

Query: 663 SN 664
           SN
Sbjct: 766 SN 767



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 108/197 (54%), Gaps = 27/197 (13%)

Query: 472 IYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSS 528
           I Q     +++P  INL SL    L GCS LK+ PEI  +++    L +  TAIEELP+S
Sbjct: 666 ILQGCTSLSAVPDNINLRSLTNFILSGCSKLKKLPEIGEDMKQLRKLHVDGTAIEELPTS 725

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLC-NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
           I +L+ L  L+L +C  L S+   +C +L SL+ LN+SGC  L +LPE +G+LE L+ L 
Sbjct: 726 INHLNGLTLLNLRDCKSLLSLPDVICTSLTSLQILNVSGCSNLNELPENLGSLECLQELY 785

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
            +    + +P+S K L+ L+ L L+ CK L +LP++          CT+L +L       
Sbjct: 786 ASRTPIQVLPTSSKHLTDLTLLNLRECKNLLTLPDVI---------CTNLTSLQ------ 830

Query: 648 TRSSKHWDIFNFSNCSN 664
                   I N S CSN
Sbjct: 831 --------ILNLSGCSN 839



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 8/151 (5%)

Query: 481 SLPTGI--NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
           SLP  I  +L SL+ L + GCSNL   PE    + C +++L    T I+ LP+S  +L+ 
Sbjct: 745 SLPDVICTSLTSLQILNVSGCSNLNELPENLGSLEC-LQELYASRTPIQVLPTSSKHLTD 803

Query: 535 LVDLDLTNCSGLKSVSSRLC-NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
           L  L+L  C  L ++   +C NL SL+ LNLSGC  L +LPE +G+LESL+ L  +    
Sbjct: 804 LTLLNLRECKNLLTLPDVICTNLTSLQILNLSGCSNLNELPENLGSLESLQELYASGTAI 863

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            ++P S+ QLS+L +L    C +LQSLP LP
Sbjct: 864 SQVPESISQLSQLEELVFDGCSKLQSLPRLP 894


>gi|357499453|ref|XP_003620015.1| Resistance protein [Medicago truncatula]
 gi|355495030|gb|AES76233.1| Resistance protein [Medicago truncatula]
          Length = 1065

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 227/731 (31%), Positives = 370/731 (50%), Gaps = 108/731 (14%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK---LNRGNEISPSLSSAIEGSKISI 73
           DVFL  +G D R+ F  +L  AL  + I TF DD    L R ++++P +   IE S+I I
Sbjct: 19  DVFLICKGTDTRYGFTGNLLKALIDKGIRTFHDDDDSDLQRRDKVTPII---IEESRILI 75

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
            IFS  YASS  CL+ LV I+      G +V+PVF+ V+P+D       Y  +L      
Sbjct: 76  PIFSANYASSSSCLDTLVHIIHCYKTKGCLVLPVFFGVEPTDVRHHTGRYGKALAEHENR 135

Query: 124 -------------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSD------LF 153
                        W     +  +           E  LI   V  IS K+S        +
Sbjct: 136 FQNDTKNMERLQQWKVALSLAANLPSYHDDSHGYEYELIGKIVKYISNKISRQSLHVATY 195

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
           P       VG++S +++++S L  G  +  + VGI+GIGG GK+T+A AIY+ ++  FEG
Sbjct: 196 P-------VGLQSRVQQVKSLLDEGPDDGVHMVGIYGIGGSGKSTLARAIYNFVADQFEG 248

Query: 213 SYFMQNIRDESEKVG-----------------GLANIH--LNFERRRLSRMKVLIVFYDL 253
             F++ +R+ S                      LA++   ++  + RL R K+L++  D+
Sbjct: 249 LCFLEQVRENSASNSLKRFQEMLLSKTLQLKIKLADVSEGISIIKERLCRKKILLILDDV 308

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            ++KQ++ L G +D F PGSRVIITTRD  LL  H    +   + VK L+  ++L L   
Sbjct: 309 DNMKQLNALAGGVDWFGPGSRVIITTRDKHLLACHE---IEKTYAVKGLNVTEALELLRW 365

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF  +   + + ++ N V+ YA+G+P+ ++++GS L G + EE ++ ++  +++P+ +I
Sbjct: 366 MAFKNDKVPSSYEKILNRVVAYASGLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEI 425

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG--ISRLVGKSLV 431
           Q++LKVSYD L++EEQ++FLD AC FKG     V   L A  +   I   +  LV K L+
Sbjct: 426 QRILKVSYDSLEEEEQSVFLDIACCFKGCKWEKVKEILHA-HYGHCINHHVEVLVEKCLI 484

Query: 432 TI--SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TG 485
                ++ +++H+L++ MG E+VR ES  +PGKRSRLW  +DI++VL ENT         
Sbjct: 485 DHFEYDSHVSLHNLIENMGKELVRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIY 544

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +NL S++ +        K+   +   I +      +++ LP S+  +   +         
Sbjct: 545 MNLHSMESVIDKNGKAFKKMTHLKTFITENGYHIQSLKYLPRSLRVMKGCI--------- 595

Query: 546 LKSVSSRLCN--LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQ 602
           L+S SS   N  L++++ L    C  L   P ++  L +LE  + A   +   I +S++ 
Sbjct: 596 LRSPSSSSLNKKLENMKVLIFDNCQDLIYTP-DVSWLPNLEKFSFARCHNLVTIHNSLRY 654

Query: 603 LSKLSDLRLQNCKRLQSLPEL--PCGSSIHARHCTSLKTLSN--------SSTLLTRSSK 652
           L++L  L  + C++L+S P L  P   ++   +C SLK+            S LL  +S 
Sbjct: 655 LNRLEILNAEGCEKLESFPPLQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSI 714

Query: 653 HWDIFNFSNCS 663
               F+F N S
Sbjct: 715 GEFPFSFQNLS 725



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 11/147 (7%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L+++K L    C +L   P++S   N+E         +  + +S+  L+RL  L+   C 
Sbjct: 608 LENMKVLIFDNCQDLIYTPDVSWLPNLEKFSFARCHNLVTIHNSLRYLNRLEILNAEGCE 667

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S         SL+ L LS C  L+  PE +  + +++ + L E    + P S + LS
Sbjct: 668 KLESFPP--LQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIGEFPFSFQNLS 725

Query: 605 KLSDLRLQ------NCKRLQSLPELPC 625
           +L  L +       N  R+  L E  C
Sbjct: 726 ELRHLTISGDNLKINLLRILRLDECKC 752


>gi|6692110|gb|AAF24575.1|AC007764_17 F22C12.17 [Arabidopsis thaliana]
          Length = 1195

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 226/712 (31%), Positives = 352/712 (49%), Gaps = 118/712 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR +F+SH         I  F D ++ RG  ISP+L+ AI  S+ISIV
Sbjct: 211 RYRVFTSFHGSDVRTSFLSHFRKQFNNNGITMFDDQRILRGETISPALTQAIRESRISIV 270

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           + S+ YASS WCL+EL++IL+ K+  GQIV+ VFY VDPSD                   
Sbjct: 271 LLSKNYASSGWCLDELLEILKCKDDMGQIVMTVFYGVDPSDVRKQTGEFGIAFNETCACR 330

Query: 117 ------GYCPSLGWMGIFDIP-------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                  +  +L ++G  +I         +E+ +IE    D+S+KL ++ P  + D +VG
Sbjct: 331 TEEERQKWSQALNYVG--NIAGEHLLNWDNEAKMIEKIARDVSEKL-NVTPCRDFDGMVG 387

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +E+ +++I+S L   + E   V I G  GIGK+TI  A++S +S+ F  + F+ N+R  S
Sbjct: 388 IEAHLRKIQSLLDLDNDEVKMVAISGPAGIGKSTIGRALHSLLSNRFHHTCFVDNLRG-S 446

Query: 224 EKVG----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
             +G                      G    HL   + RL  MKV I+  D+ D+KQ++ 
Sbjct: 447 HPIGLDEYGLKLRLQEQLLSKILNQDGSRICHLGAIKERLCDMKVFIILDDVNDVKQLEA 506

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L    + F PGSR+I+TT + +LLK H    + + + V   S  +++ +  R AF Q+  
Sbjct: 507 LANESNWFGPGSRIIVTTENKELLKQHG---INNTYYVGFPSDEEAIKILCRYAFRQSSS 563

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF +L+  V +    +PL L+V+GS L G +EEEWE  + +L+ +   DI++VL+V Y
Sbjct: 564 RHGFKKLTRSVTELCGKLPLGLRVVGSSLHGKNEEEWEYVIRRLETIIDRDIEQVLRVGY 623

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITM 440
           + L + EQ++FL  A FF   D  LV   L       +  ++ LV KSL+ IS + +I M
Sbjct: 624 ESLHENEQSLFLHIAIFFNYEDGDLVKAMLAENDLDIEHELNILVNKSLIYISTDGRIRM 683

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL---------PTGINLDSL 491
           H LLQ +G +  ++E   +P KR  L   ++I  VL  +             +GIN  S+
Sbjct: 684 HKLLQLVGRQANQRE---EPWKRRILIDAQEICHVLENDIGTGAVSGILFDTSGINEVSI 740

Query: 492 KELYLGGCSNLK---------------------RFP-----------EISC--------N 511
               L    NL+                      FP              C        N
Sbjct: 741 SNKALRRMCNLRFLSVYKTKHDGYNRMDIPEDMEFPPRLRLLHWDAYPSKCLPLKFRAEN 800

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           + +LD+K++ +E L      L++L  L+L     LK +   L N  +L  L+LS CL L 
Sbjct: 801 LVELDMKDSRLEYLWPGTQLLTKLKKLNLEGSYNLKELPD-LSNATNLEMLDLSVCLALA 859

Query: 572 KLPEEIGNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +LP  I NL  L+  Y++L E     IP+++  L+ L  + +  C +L++ P
Sbjct: 860 ELPSSIKNLHKLDVIYMDLCE-SLHMIPTNI-NLASLETMYMTGCPQLKTFP 909



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 97/194 (50%), Gaps = 36/194 (18%)

Query: 472  IYQVLNENTSL-PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG 530
            IY  L E+  + PT INL SL+ +Y+ GC  LK FP  S  I+ L L  T +EE+P+SI 
Sbjct: 874  IYMDLCESLHMIPTNINLASLETMYMTGCPQLKTFPAFSTKIKRLYLVRTGVEEVPASIT 933

Query: 531  NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
            + SRL+ +DL+    LKS++                      LP       SL+ L+L+ 
Sbjct: 934  HCSRLLKIDLSGSRNLKSIT---------------------HLPS------SLQTLDLSS 966

Query: 591  KDFEKIPSS-MKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLT 648
             D E I  S +K L +L  LRL  C++L+SLPELP     + A  C SL+ ++      T
Sbjct: 967  TDIEMIADSCIKDLQRLDHLRLCRCRKLKSLPELPASLRLLTAEDCESLERVTYPLNTPT 1026

Query: 649  RSSKHWDIFNFSNC 662
                     NF+NC
Sbjct: 1027 GQ------LNFTNC 1034


>gi|357471469|ref|XP_003606019.1| Resistance protein [Medicago truncatula]
 gi|357499467|ref|XP_003620022.1| Resistance protein [Medicago truncatula]
 gi|355495037|gb|AES76240.1| Resistance protein [Medicago truncatula]
 gi|355507074|gb|AES88216.1| Resistance protein [Medicago truncatula]
          Length = 822

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 227/731 (31%), Positives = 370/731 (50%), Gaps = 108/731 (14%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK---LNRGNEISPSLSSAIEGSKISI 73
           DVFL  +G D R+ F  +L  AL  + I TF DD    L R ++++P +   IE S+I I
Sbjct: 19  DVFLICKGTDTRYGFTGNLLKALIDKGIRTFHDDDDSDLQRRDKVTPII---IEESRILI 75

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
            IFS  YASS  CL+ LV I+      G +V+PVF+ V+P+D       Y  +L      
Sbjct: 76  PIFSANYASSSSCLDTLVHIIHCYKTKGCLVLPVFFGVEPTDVRHHTGRYGKALAEHENR 135

Query: 124 -------------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSD------LF 153
                        W     +  +           E  LI   V  IS K+S        +
Sbjct: 136 FQNDTKNMERLQQWKVALSLAANLPSYHDDSHGYEYELIGKIVKYISNKISRQSLHVATY 195

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
           P       VG++S +++++S L  G  +  + VGI+GIGG GK+T+A AIY+ ++  FEG
Sbjct: 196 P-------VGLQSRVQQVKSLLDEGPDDGVHMVGIYGIGGSGKSTLARAIYNFVADQFEG 248

Query: 213 SYFMQNIRDESEKVG-----------------GLANIH--LNFERRRLSRMKVLIVFYDL 253
             F++ +R+ S                      LA++   ++  + RL R K+L++  D+
Sbjct: 249 LCFLEQVRENSASNSLKRFQEMLLSKTLQLKIKLADVSEGISIIKERLCRKKILLILDDV 308

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            ++KQ++ L G +D F PGSRVIITTRD  LL  H    +   + VK L+  ++L L   
Sbjct: 309 DNMKQLNALAGGVDWFGPGSRVIITTRDKHLLACHE---IEKTYAVKGLNVTEALELLRW 365

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF  +   + + ++ N V+ YA+G+P+ ++++GS L G + EE ++ ++  +++P+ +I
Sbjct: 366 MAFKNDKVPSSYEKILNRVVAYASGLPVVIEIVGSNLFGKNIEECKNTLDWYEKIPNKEI 425

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG--ISRLVGKSLV 431
           Q++LKVSYD L++EEQ++FLD AC FKG     V   L A  +   I   +  LV K L+
Sbjct: 426 QRILKVSYDSLEEEEQSVFLDIACCFKGCKWEKVKEILHA-HYGHCINHHVEVLVEKCLI 484

Query: 432 TI--SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TG 485
                ++ +++H+L++ MG E+VR ES  +PGKRSRLW  +DI++VL ENT         
Sbjct: 485 DHFEYDSHVSLHNLIENMGKELVRLESPFEPGKRSRLWFEKDIFEVLEENTGTSKIEMIY 544

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +NL S++ +        K+   +   I +      +++ LP S+  +   +         
Sbjct: 545 MNLHSMESVIDKNGKAFKKMTHLKTFITENGYHIQSLKYLPRSLRVMKGCI--------- 595

Query: 546 LKSVSSRLCN--LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQ 602
           L+S SS   N  L++++ L    C  L   P ++  L +LE  + A   +   I +S++ 
Sbjct: 596 LRSPSSSSLNKKLENMKVLIFDNCQDLIYTP-DVSWLPNLEKFSFARCHNLVTIHNSLRY 654

Query: 603 LSKLSDLRLQNCKRLQSLPEL--PCGSSIHARHCTSLKTLSN--------SSTLLTRSSK 652
           L++L  L  + C++L+S P L  P   ++   +C SLK+            S LL  +S 
Sbjct: 655 LNRLEILNAEGCEKLESFPPLQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSI 714

Query: 653 HWDIFNFSNCS 663
               F+F N S
Sbjct: 715 GEFPFSFQNLS 725



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 11/147 (7%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L+++K L    C +L   P++S   N+E         +  + +S+  L+RL  L+   C 
Sbjct: 608 LENMKVLIFDNCQDLIYTPDVSWLPNLEKFSFARCHNLVTIHNSLRYLNRLEILNAEGCE 667

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S         SL+ L LS C  L+  PE +  + +++ + L E    + P S + LS
Sbjct: 668 KLESFPP--LQSPSLQNLELSNCKSLKSFPELLCKMTNIKSILLKETSIGEFPFSFQNLS 725

Query: 605 KLSDLRLQ------NCKRLQSLPELPC 625
           +L  L +       N  R+  L E  C
Sbjct: 726 ELRHLTISGDNLKINLLRILRLDECKC 752


>gi|15239700|ref|NP_199688.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758876|dbj|BAB09430.1| disease resistance protein [Arabidopsis thaliana]
 gi|332008339|gb|AED95722.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1190

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 228/694 (32%), Positives = 329/694 (47%), Gaps = 94/694 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R   VSHL AAL  + I TF DD+ L  G+ IS  L  AIEGSK ++V
Sbjct: 14  YDVFLSFRGEDTRRTIVSHLYAALGAKGIITFKDDQDLEVGDHISSHLRRAIEGSKFAVV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------- 118
           + SE Y +SRWCL EL  I+E  N     V+P+FY VDPSD  +                
Sbjct: 74  VLSERYTTSRWCLMELQLIMELYNLGKLKVLPLFYEVDPSDVRHQRGSFGLERYQGPEFA 133

Query: 119 ----------CPSLGWMGIFD-IPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                     C      G+       E++++E  V  IS +L+ +  +  +D LVG+E+ 
Sbjct: 134 DIVQRWRVALCMVANLSGMVSRYCADEAMMLEEIVEVISSRLASMQATSFED-LVGMEAH 192

Query: 168 IKEIESQLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
           ++ I   L      E   VGIWG+GGIGKTTIA  +Y  ++S F    F++++    +KV
Sbjct: 193 MENIRPLLKKDFDAEVCMVGIWGMGGIGKTTIAKYLYEQLASQFPAHSFIEDVGQICKKV 252

Query: 227 G------------------GLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRL 266
                               L +I    N  R RL  +KVL V   +  ++Q+  L    
Sbjct: 253 DLKCIQQQLLCDILSTKRVALMSIQNGANLIRSRLGTLKVLFVLDGVDKVEQLHALAKEA 312

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA-GF 325
             F PGSR+IITTRD +LL +    RV + +EVK L   DSL +    AF    P   G+
Sbjct: 313 SWFGPGSRIIITTRDRRLLDS---CRVTNKYEVKCLQNEDSLKIVKNIAFAGGVPTLDGY 369

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
              +    + A G+PLAL   GS+L+G +  +EWE A++ L+  PH +I  +L+ SY  L
Sbjct: 370 ERFAIRASQLAQGLPLALVAFGSFLRGATSIDEWEDAIDTLETAPHQNIMDILRSSYTNL 429

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDL 443
           D  ++ IF+  AC F G     V   L       K  I  L  KSL+ IS +  I +H L
Sbjct: 430 DLRDKTIFIRVACLFNGEPVSRVSTLLS----ETKRRIKGLAEKSLIHISKDGYIDIHSL 485

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-------------SLPTGINLDS 490
           +++M  EIV +ES+  P ++  LW P + Y VL   T              LP   ++D 
Sbjct: 486 IKQMAREIVVEESLYIPRQQRILWDPHNSYGVLESKTGTERIQGMTLHMCELPRAASIDG 545

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG----------------NLSR 534
                +     LK F  ++     L++       LP S+                  LSR
Sbjct: 546 SAFEQMENLIFLKFFKHLNDRESKLNINSKNRMVLPRSLRLLHWDAYPLTTLLPTFPLSR 605

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           LV+L L   S L+++     +L  LR L+++G   L KLP+     +  E +       E
Sbjct: 606 LVELHL-RYSNLENLWDGKMSLLELRMLDVTGSKNLTKLPDLSRATKLEELIAKGCTRLE 664

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLP----ELP 624
           +IP ++  L  L  L + +C RL +L     ELP
Sbjct: 665 QIPETIGSLPSLKKLDVSHCDRLINLQMIIGELP 698



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 15/120 (12%)

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           L  LNL   L +E +P++IG L+ L+ L+L+  DF  +P+ M+ LS +  LRL NC +LQ
Sbjct: 805 LTELNLIN-LNIESIPDDIGLLQVLQKLDLSGNDFTCLPTDMENLSSMKSLRLCNCLKLQ 863

Query: 619 SLPELPCGSSIHARHCTSLKTLSNSSTLLT-----RSSKHW-----DIF----NFSNCSN 664
           +LP+LP   ++   +C  L++    S         R ++ W     D+F     FS+C+N
Sbjct: 864 TLPKLPQLETLKLSNCILLQSPLGHSAARKDERGYRLAELWLDNCNDVFELSYTFSHCTN 923



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 43/204 (21%)

Query: 469 PEDI--YQVL-------NENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLK 518
           P+DI   QVL       N+ T LPT + NL S+K L L  C  L+  P+           
Sbjct: 819 PDDIGLLQVLQKLDLSGNDFTCLPTDMENLSSMKSLRLCNCLKLQTLPK----------- 867

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS-----LRRLNLSGCLKLEKL 573
                        L +L  L L+NC  L+S        K      L  L L  C  + +L
Sbjct: 868 -------------LPQLETLKLSNCILLQSPLGHSAARKDERGYRLAELWLDNCNDVFEL 914

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHAR 632
                +  +L YL+L+  D   +P +++ L  L+ L L +CK+L+S+ +LP   +S++AR
Sbjct: 915 SYTFSHCTNLTYLDLSGNDMVTMPVTIRFLRLLNTLCLNDCKKLKSMVQLPPNLTSLYAR 974

Query: 633 HCTSLKTLSNSSTLLTRSSKHWDI 656
            CTSL+ +      L  S KH D+
Sbjct: 975 GCTSLEIIHLP---LDHSIKHVDL 995


>gi|297836995|ref|XP_002886379.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332220|gb|EFH62638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1092

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 227/714 (31%), Positives = 347/714 (48%), Gaps = 95/714 (13%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VF SF G DVR   +SH+     R  I  F D+K+ R   I+PSL   I  S+ISIVI 
Sbjct: 18  NVFASFHGPDVRKTLLSHMRKQFNRNGITMFDDEKIERSATIAPSLIGGIRDSRISIVIL 77

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGI--------- 127
           S+ YASS WCL+ELV+ILE K   GQIV+ +FY  DPSD      LG  GI         
Sbjct: 78  SKKYASSSWCLDELVEILECKKVMGQIVMTIFYGADPSDVR--KQLGEFGIAFDETCAHK 135

Query: 128 ----------------------FDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                                 F+   +E+ +I+    D+S KL +  PS   D +VG+ 
Sbjct: 136 TDEERKKWSEALNEVGNIAGEDFNRWDNEANMIKKIAEDVSDKL-NATPSRVFDGMVGLT 194

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE--- 222
           + ++++ES L   + E   V I G  GIGKTTIA A+ + +S+ F+ + F+ N+R     
Sbjct: 195 AHLRKMESLLDLDNDEVKMVAITGPAGIGKTTIARALQTLLSNKFQLTCFVDNLRGSYYN 254

Query: 223 -------SEKV-------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
                   E+         GL   H      RL + +VLI+  D+ ++KQ+  L      
Sbjct: 255 GLDVVRLQEQFLSNLLNQDGLRIRHSGVIEERLCKQRVLIILDDVNNIKQLMALANETTW 314

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F PGSR+++TT + +LL+ H    + +++ V   S  D++ +  + AF +N    GF +L
Sbjct: 315 FGPGSRIVVTTENKELLQQH---GIDNMYHVGFPSDEDAIKILCKYAFRKNSLYHGFKKL 371

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           +  VI+    +PL L V+GS L+G +EEEWE  ++KL+   + DI++VL++ Y+ LD+ E
Sbjct: 372 AKRVIELCCNLPLGLCVVGSSLRGKNEEEWEQVIHKLETNLNQDIEEVLRIGYESLDENE 431

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKITMHDLLQE 446
           Q++FL  A FF   D   +           K G+  LV +SLV IS  + +I MH LLQ+
Sbjct: 432 QSLFLHIAVFFNHKDGDHMKTMFAESDLDVKHGLKILVNRSLVEISTYDGRIMMHRLLQQ 491

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP---------TGINLDSLKELYLG 497
           +G + + ++   +P KR  L    DI  VL   T            +GIN  S+ +    
Sbjct: 492 VGKKAIHKQ---EPWKRKILLDAPDICDVLERATGTRAMSGISFDISGINEVSISKKAFQ 548

Query: 498 GCSNLK---------------RFP---EISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
              NL+                 P   E    +  LD +E   + L  +  +   LV+L+
Sbjct: 549 RMPNLRFLRVYKSRVDGNDRVHIPEGMEFPHRLRLLDWEEYPRKSLHPTF-HPEYLVELN 607

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFEKIP 597
             N S L+ +      L +L+++NL+    L+KLP+     NLE L  L    +  E IP
Sbjct: 608 FEN-SKLEKLWEGREVLTNLKKINLALSRNLKKLPDLTYATNLEELSLLRC--ESLEAIP 664

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSSTLLT 648
           SS   L KL  L + +C  ++ +P    L     +    C+SL+ +   ST +T
Sbjct: 665 SSFSHLHKLHRLLMNSCISIEVIPAHMNLASLEQVSMAGCSSLRNIPLMSTNIT 718



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 85/160 (53%), Gaps = 28/160 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P  +NL SL+++ + GCS+L+  P +S NI +L + +T +E LP+SIG  SRL  L +T
Sbjct: 687 IPAHMNLASLEQVSMAGCSSLRNIPLMSTNITNLYISDTEVEYLPASIGLCSRLEFLHIT 746

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                             R  N  G   L  LP       SL  LNL   D E+IP  +K
Sbjct: 747 ------------------RNRNFKG---LSHLP------TSLRTLNLRGTDIERIPDCIK 779

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
            L +L  L L  C++L SLPELP   SS+ AR C SL+T+
Sbjct: 780 DLHRLETLDLSECRKLASLPELPGSLSSLMARDCESLETV 819


>gi|227438223|gb|ACP30601.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1207

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 223/727 (30%), Positives = 345/727 (47%), Gaps = 110/727 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G DVR  F+SHL     ++ I  F D+++ R   + P L  AI+ S+I++VI
Sbjct: 17  YDVFPSFSGVDVRVTFLSHLLKEFDKKLITAFKDNEIERSRSLDPELKQAIKDSRIAVVI 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAG-----YCPS-- 121
           FS+ YASS WCLNEL++I+    K GQ+V+PVFY +DPS       D G      C +  
Sbjct: 77  FSQNYASSSWCLNELLEIV----KCGQMVIPVFYRLDPSHVRKQTGDFGKIFEETCKNQT 132

Query: 122 -----LGW-MGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                + W   + D+  +          E+ +IE   ND+  KL  L  S + +  VG+E
Sbjct: 133 EEVIIIQWRRALTDVANTLGYHSVNWGNEAAMIEEIANDVLDKLL-LTSSKDSENFVGIE 191

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM--------- 216
             + ++   L   + E   VG+WG  GIGKTTIA  ++  +S HF GS F+         
Sbjct: 192 DHVAKLSVLLQLDAEEVRMVGLWGSSGIGKTTIARVLFQRLSQHFRGSIFIDRAFVSKTM 251

Query: 217 ------------------QNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQ 258
                             +N   E    G +   HL+    RL   KVLI   D  D   
Sbjct: 252 EIFKEANPDDYNMKLHLQRNFLSEILGKGDIKINHLSAVGERLKNQKVLIFIDDFDDQVV 311

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L+G+   F  GSR+++ T D Q L+ H    + H++EV   +   ++ +  R+AF +
Sbjct: 312 LEALVGQTQWFGSGSRIVVVTNDKQYLRAH---GINHIYEVYLPTEELAVEMLCRSAFRK 368

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
                GF EL   V   A  +PL L VLGS L+G  +E W   + +L+      I+K L+
Sbjct: 369 KAAPEGFEELVAKVTGLAGSLPLGLNVLGSSLRGRDKEYWMDLLPRLQNGLDGKIEKTLR 428

Query: 379 VSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           VSYDGL  EE + +F   AC F+      +   L     S  +G+  L  KSL+ +  + 
Sbjct: 429 VSYDGLTSEEDKALFRHIACLFQWEKVTYLKLLLADSGLSVTVGLENLADKSLIHVREDY 488

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKE 493
           + MH LL+EMG  IVR E   +P KR  L   +DI  VL+++T     L   +N+D + E
Sbjct: 489 VKMHRLLEEMGRGIVRLE---EPEKREFLVDAQDICDVLSQDTGTHKILGIKLNIDEIDE 545

Query: 494 L-----YLGGCSNLKRFPEISC------------------------NIEDLDLKETAIEE 524
           L        G  NL RF EI                           ++ LD     +  
Sbjct: 546 LNVHENAFKGMRNL-RFLEIHSKKRYEIGNEEVTIHLPENFDYLPPKLKILDWFGYPMRC 604

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           LPS      +LV L + N S L+ +   + +L  L+ +++ G   L ++P ++    +LE
Sbjct: 605 LPSKF-RPEKLVKLKMVN-SKLEKLWEGIVSLTCLKEMDMWGSTNLIEMP-DLSKATNLE 661

Query: 585 YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTL 640
            L L +     K+PSS+   +KL  L L+NC+ ++++P    L     ++ + C+ ++T 
Sbjct: 662 TLKLRKCYSLVKLPSSIPHPNKLKKLDLRNCRNVETIPTGISLKSLKDLNTKGCSRMRTF 721

Query: 641 SNSSTLL 647
              S+ +
Sbjct: 722 PQISSTI 728



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 53/79 (67%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL  + L GCS L+ FP+IS NI++LDL ET IEE+P  I   SRL  L +
Sbjct: 830 TLPTGINLGSLSRVDLSGCSRLRTFPQISTNIQELDLSETGIEEVPCWIEKFSRLNSLQM 889

Query: 541 TNCSGLKSVSSRLCNLKSL 559
             C+ L+ V+  + + KSL
Sbjct: 890 KGCNNLEYVNLNISDCKSL 908



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 110/258 (42%), Gaps = 79/258 (30%)

Query: 434 SNNKITMHDLLQEMGGEIVR----------QESIKDPGKRSRLWHPEDIYQVLNENTSLP 483
           S N I M DL +    E ++            SI  P K  +L    D+    N  T +P
Sbjct: 645 STNLIEMPDLSKATNLETLKLRKCYSLVKLPSSIPHPNKLKKL----DLRNCRNVET-IP 699

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG----NL------- 532
           TGI+L SLK+L   GCS ++ FP+IS  IED+D+  T IEE+ S++     NL       
Sbjct: 700 TGISLKSLKDLNTKGCSRMRTFPQISSTIEDVDIDATFIEEIRSNLSLCFENLHTFTMHS 759

Query: 533 -------------------------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
                                            L  LDL++  GL  + S   NL +L R
Sbjct: 760 PKKLWERVQVCYIVFIGGKKSSAEYDFVYLSPSLWHLDLSDNPGLVELPSSFKNLHNLSR 819

Query: 562 LNLSGCLKLEKLPEEIGNLESL---------------------EYLNLAEKDFEKIPSSM 600
           L +  C+ LE LP  I NL SL                     + L+L+E   E++P  +
Sbjct: 820 LKIRNCVNLETLPTGI-NLGSLSRVDLSGCSRLRTFPQISTNIQELDLSETGIEEVPCWI 878

Query: 601 KQLSKLSDLRLQNCKRLQ 618
           ++ S+L+ L+++ C  L+
Sbjct: 879 EKFSRLNSLQMKGCNNLE 896


>gi|2853078|emb|CAA16928.1| TMV resistance protein N-like [Arabidopsis thaliana]
 gi|7268747|emb|CAB78953.1| TMV resistance protein N-like [Arabidopsis thaliana]
          Length = 1164

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 231/714 (32%), Positives = 340/714 (47%), Gaps = 125/714 (17%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVF+SFRG D RH+F SHL   L  + I+ F D KL RG E    L   IE SK+SIV+F
Sbjct: 25  DVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKL-RGGEYISLLFDRIEQSKMSIVVF 83

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPT---- 132
           SE YA+S WCL E+ KI++ + ++   V+P+FY V  SD     +  +  +F  PT    
Sbjct: 84  SEDYANSWWCLEEVGKIMQRRKEFNHGVLPIFYKVSKSDVSN-QTGSFEAVFQSPTKIFN 142

Query: 133 ----------------------------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                                       SE   ++  V +  + L++L P    D L G+
Sbjct: 143 GDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKNTFRMLNELSPCVIPDDLPGI 202

Query: 165 ESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ES  KE+E  L+  + E    VG+ G+ GIGKTT+A  +Y      F+G  F+++I D S
Sbjct: 203 ESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNS 262

Query: 224 EKVG-------------GLANIHLNFERRR---LSRMKVLIVFYDLTDLKQIDLLIGRLD 267
           ++ G                N+ +  + R    L   K+ IV  ++T+ KQI+ LIG+ +
Sbjct: 263 KRYGLPYLYQKLLHKLLDGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKN 322

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            +  GSR++I TRD +LL+ +  +     + V  L+  +++ LF    FG ++P   F++
Sbjct: 323 VYRQGSRIVIITRDKKLLQKNADA----TYVVPRLNDREAMELFCLQVFGNHYPTEEFVD 378

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LSN  + YA G+PLAL++LG  L       W+  +  L+  P  ++QK LK SY  LDD+
Sbjct: 379 LSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELKSSYKALDDD 438

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           ++++FLD ACFF+      V + L +    AK  +  L  K LVTIS ++I MHDLL  M
Sbjct: 439 QKSVFLDIACFFRSEKADFVSSILKSDDIDAKDVMRELEEKCLVTISYDRIEMHDLLHAM 498

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-------------------LPTGIN- 487
           G EI +++SI+  G+R RLW+ +DI  +L  NT                     P     
Sbjct: 499 GKEIGKEKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTM 558

Query: 488 LDSLKEL--------------YLGGCSNL-KRFPE-----------ISCNIEDLDLKE-- 519
           L  LK L              ++  CS +   FP+             C   D D KE  
Sbjct: 559 LSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELV 618

Query: 520 ------TAIEELPSSIGNLS--RLVDL----DLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
                 + I++L     N    R VDL    DL N SGL          K+L RL+L GC
Sbjct: 619 DLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRA-------KNLERLDLEGC 671

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
             L+ L   +  +  L YLNL +    E +P   K +  L  L L  C +L+  
Sbjct: 672 TSLDLLG-SVKQMNELIYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDF 723



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 6/182 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP G  + SLK L L GC  LK F  IS +IE L L+ TAIE +   I +L  L+ L+L
Sbjct: 699 SLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLHLEGTAIERVVEHIESLHSLILLNL 758

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK + + L  LKSL+ L LSGC  LE LP     +E LE L +     ++ P   
Sbjct: 759 KNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEILLMDGTSIKQTP--- 815

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            ++S LS+L++  C   + + +   G  + A  C SL+ +S   T+   + +    F F+
Sbjct: 816 -EMSCLSNLKI--CSFCRPVIDDSTGLYLDAHGCGSLENVSKPLTIPLVTERMHTTFIFT 872

Query: 661 NC 662
           +C
Sbjct: 873 DC 874



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 6/137 (4%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           N +SL+ + LG   +L     +S   N+E LDL+     +L  S+  ++ L+ L+L +C+
Sbjct: 636 NTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCT 695

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S+      +KSL+ L LSGCLKL+     I + ES+E L+L     E++   ++ L 
Sbjct: 696 SLESLPKGF-KIKSLKTLILSGCLKLKDF--HIIS-ESIESLHLEGTAIERVVEHIESLH 751

Query: 605 KLSDLRLQNCKRLQSLP 621
            L  L L+NC++L+ LP
Sbjct: 752 SLILLNLKNCEKLKYLP 768


>gi|399920222|gb|AFP55569.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1134

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 240/702 (34%), Positives = 361/702 (51%), Gaps = 98/702 (13%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISP 60
           ASSSS++      K+DVFLSFRG+D R  F  +L   L R+ I TF DD +L RG  ISP
Sbjct: 9   ASSSSALQW----KYDVFLSFRGEDTRKGFTDYLYIELQRQGIRTFRDDPQLERGTAISP 64

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L +AIE S+ +IV+ S  YA+S WCL EL KILE   + G I+ P+FY VDPS      
Sbjct: 65  ELLTAIEQSRFAIVVLSPKYATSTWCLRELSKILECMEERGTIL-PIFYEVDPSHVRHQR 123

Query: 117 ----------------------GYCPSLGWMGIFDIPTSESVLIEGNV-NDISKKL-SDL 152
                                 G+  +L  +      TSES   E  +  +I ++L S +
Sbjct: 124 GSFAEAFQEHEEKFGVGNKEVEGWRDALTKVASLAGWTSESYRYETQIIKEIVQELWSKV 183

Query: 153 FPS----DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
            PS     + ++L G+++  +EI+  L   + +   +GIWG+GG+GKTT+A  +Y  IS 
Sbjct: 184 HPSLTVFGSSEKLFGMDTKWEEIDVLLDKEANDVRFIGIWGMGGMGKTTLARLVYEKISY 243

Query: 209 HFEGSYFMQNIRDESEKVG------------------GLANIH--LNFERRRLSRMKVLI 248
            F+   F+ ++R      G                   + N++  + + +R +    VL+
Sbjct: 244 QFDVCIFLDDVRKAHADHGLVYLTKTILSQLLKEENVQVWNVYSGIAWIKRCVCNKAVLL 303

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  ++   +Q++ L+G  D F   SR+IITTR+  +L  H    V   +E+K L+ +++L
Sbjct: 304 VLDNVDQSEQLEKLVGEKDWFGLRSRIIITTRNQLVLVTHG---VEKPYELKGLNNDEAL 360

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL-KGMSEEEWESAVNKLKR 367
            LFS  AF +  P   +++ S    +YA G PLAL+ LGS L    S   W SA+ KL+ 
Sbjct: 361 QLFSWKAFRKYEPEVDYVKHSMSFARYAGGHPLALKTLGSLLYNKRSLHSWSSALAKLQN 420

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACF------FKGNDQYLVMNFLDACRFSAKIG 421
            P   +  +LKVSYD LD  E+ IFLD ACF      +  +D++++       +F ++I 
Sbjct: 421 TPDKTVFDLLKVSYDELDKMEKKIFLDIACFRRFRRLYDDDDEFMIEQVY---KFESRIA 477

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
           I  L  +SL+TIS+N I MHDL++EMG EIVRQE+ ++PG RSRLW   DI+ V   NT 
Sbjct: 478 IDVLADRSLLTISHNHIYMHDLIREMGCEIVRQEN-EEPGGRSRLWLRNDIFHVFTNNTG 536

Query: 482 LPT--GINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL- 538
                GI LD L EL      NL+ F ++ C ++ L L    +   P  + N  R ++  
Sbjct: 537 TEAIEGILLD-LAELEEADW-NLEAFSKM-CKLKLLYLHNLKLSVGPKFLPNALRFLNWS 593

Query: 539 --------------DLTNCSGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNL 580
                         +LT  S + S    L N     ++L+ ++LS  + L + P+  G +
Sbjct: 594 WYPSKSLPPCFQPDELTELSLVHSNIDHLWNGIKCSRNLKSIDLSYSINLTRTPDFTG-I 652

Query: 581 ESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +LE L L    +  KI  S+  L +L     +NCK ++SLP
Sbjct: 653 PNLEKLVLEGCTNLVKIHPSITLLKRLKIWNFRNCKSIKSLP 694



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 40/228 (17%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR ++W+  +   +     SLP+ +N++ L+   + GCS LK  PE    +  +  L + 
Sbjct: 677 KRLKIWNFRNCKSI----KSLPSEVNMEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIG 732

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNC----------------------------SGLKSV 549
            +A+E LPSS   LS+ LV+LDL                                 L  +
Sbjct: 733 GSAVENLPSSFERLSKSLVELDLNGIVIREQPYSLFLKQNLRVSFFGLFPRKSPCPLTPL 792

Query: 550 SSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            + L +  SL +L L+ C   E ++P +IG L SLE L L   +F  +P+S+  LSKL  
Sbjct: 793 LASLKHFSSLTQLKLNDCNLCEGEIPNDIGYLSSLELLQLRGNNFVNLPASIHLLSKLKR 852

Query: 609 LRLQNCKRLQSLPELPCGSSIH--ARHCTSLKTLSNSSTLLTRSSKHW 654
           + ++NCKRLQ LPELP    +     +CTSL+   +    L+R  + W
Sbjct: 853 INVENCKRLQQLPELPATDELRVVTDNCTSLQVFPDPPN-LSRCPEFW 899



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 4/119 (3%)

Query: 490 SLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +LK + L    NL R P+ +   N+E L L+  T + ++  SI  L RL   +  NC  +
Sbjct: 631 NLKSIDLSYSINLTRTPDFTGIPNLEKLVLEGCTNLVKIHPSITLLKRLKIWNFRNCKSI 690

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           KS+ S + N++ L   ++SGC KL+ +PE +G  ++L  L +     E +PSS ++LSK
Sbjct: 691 KSLPSEV-NMEFLETFDVSGCSKLKMIPEFVGQTKTLSKLCIGGSAVENLPSSFERLSK 748


>gi|13509217|emb|CAC35328.1| N1-B protein [Linum usitatissimum]
          Length = 1108

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 232/757 (30%), Positives = 374/757 (49%), Gaps = 114/757 (15%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S   ++ ++P  +++VFLSFRG DVR  F  HL A L R KI TF D++ L +G  I  
Sbjct: 17  SSVDPTLPLLPSGEYEVFLSFRGPDVRQTFADHLYAWLVRSKIRTFRDEEGLQKGETIGS 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILES-KNKYG----QIVVPVFYLVDPSD 115
           SL  AI  SKI I I ++ YASS+WCL EL K+++  KN  G     I++PVFY +DP D
Sbjct: 77  SLIQAITESKIYIPILTQNYASSKWCLQELAKMVDCWKNGGGGKGQHIILPVFYFMDPRD 136

Query: 116 AGYCPSLGWMGIFDIPT----SESVL-----------IEG-NVNDISKK---LSDLFPSD 156
             +  S  +   F+        E++L           ++G ++N+++ +   +  +F + 
Sbjct: 137 VRHPDSGPYKEAFEQHNMKHDPETILEWKEALQDVGKMKGWHINELTGQGAVVDKIFTTI 196

Query: 157 N----------KDQLVGVESIIKEI-ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
                       D+LVG++S ++E+ E   L  ST    +GI+G+GG+GKTT+A A+++ 
Sbjct: 197 EFHLRANYTLATDELVGIDSSVEEVMELMNLDHSTSERIIGIYGMGGLGKTTLAKAVFNQ 256

Query: 206 ISSHFEGSYFMQNIRD---ESEKVGGLANIHLNFERRRLSRM------------------ 244
           +S  FE   F+ NIR+    ++ V  L N  ++   R+ S                    
Sbjct: 257 VSMQFERCCFLDNIRETLLRNDGVVALQNKVISDILRKDSDQAKNASDGVRIIRERVRRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+ +V  D+ +    D + G+L  F   SR +ITTRD + L+     ++   F ++E+S+
Sbjct: 317 KIFVVLDDIDESFHFDEIFGKLGDFSTDSRFLITTRDARTLELLNECKM---FGLEEMSH 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SL LFS++AFG ++P   +  L    I+ A+G+PLAL+V+GS L    +  WE  + +
Sbjct: 374 DHSLQLFSKHAFGVDYPPEDYASLCEEFIQVASGLPLALKVIGSLLFKSDKRFWEDKLIE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK +P   +Q+ LKVSY+ L   E+ IFLD AC F G  + + M     C       +  
Sbjct: 434 LKAIPSAKVQERLKVSYNELTHNEKQIFLDIACLFVGAKKEVPMYMWSDCDLYPASTLRT 493

Query: 425 LVGKSLVTISNNKI-TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTS 481
           LV +SLV + +NKI  MHD ++++G  IVR+E+ ++P KRSR+W   D   +L   E   
Sbjct: 494 LVQRSLVRMDDNKIFWMHDHIRDLGRTIVREENSQNPYKRSRIWSNNDAIDILKNREGND 553

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP----------EISCNIEDL--DLKETAIEEL-PSS 528
               + +D   E Y        +F           ++S N +++  +L+   +    PS 
Sbjct: 554 CVEALRVDMKGEGYALTNKEFNQFSRLRFLEVLNGDLSGNFKNILPNLRWLRVYRGDPSP 613

Query: 529 IG-NLSRLVDLDLTNCSGLKSVS--SRLCNLKSLRRLNLSGCLKLEKLPE---------- 575
            G NL++LV L+L  C    S    + +     L+ +NL+ C  LEK+P+          
Sbjct: 614 SGLNLNKLVILELDGCYVTHSWKGWNEIKAAGKLKVVNLTSCGILEKVPDLSTCRGLELL 673

Query: 576 ------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                       +IG  + L+ L++ + +   I   ++ L  L  L +        L E+
Sbjct: 674 CFHKCQWMRGELDIGTFKDLKVLDINQTEITTIKGEVESLQNLQQLDVGR----SGLIEV 729

Query: 624 PCG----SSIHARHCTSLK-----TLSNSSTLLTRSS 651
           P G    SS+     TS+K      L N   LL  SS
Sbjct: 730 PAGISKLSSLEFLDLTSVKHDEVEMLPNGLKLLVISS 766



 Score = 40.0 bits (92), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 32/187 (17%)

Query: 489  DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKS 548
            DSL  L +  C  L         + DL      +  L SS   L+ ++ L L+  + L++
Sbjct: 889  DSLSHLDISWCPRL--------TVMDLLHSLLKLGTLVSSGFELTNILPLSLSIYTKLRT 940

Query: 549  VSSR------LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK- 601
            +  R      L NLK+LR L ++GC +L     EI  L +LE  +L E   E+ PS  K 
Sbjct: 941  LEVRSSQLPDLTNLKNLRDLTITGCREL----IEIAGLHTLE--SLEELSMERCPSVRKL 994

Query: 602  ---QLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSLKTLSNSSTLLTRSSKHWD 655
                L KL  + +  C RL  +  L    S+       C S+K L N S L     K+  
Sbjct: 995  DLAGLIKLKTIHIHICTRLTEIRGLGGLESLQMLFMSGCQSIKELPNLSGL-----KNLK 1049

Query: 656  IFNFSNC 662
             F+   C
Sbjct: 1050 YFSLKEC 1056


>gi|10177430|dbj|BAB10522.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1055

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 227/702 (32%), Positives = 342/702 (48%), Gaps = 92/702 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F+SHL+     + I  F D ++ RG+ I P L  AI  S++SIV
Sbjct: 11  RYHVFSSFHGPDVRSGFLSHLHNHFESKGITPFKDQEIERGHTIGPELIQAIRESRVSIV 70

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSE 134
           + SE YASS WCL+ELV+IL+ K   G  V+ +FY VDPS         W    D  ++ 
Sbjct: 71  VLSEKYASSGWCLDELVEILKCKEASGHAVMTIFYKVDPSSV----RKQWG---DFGSTF 123

Query: 135 SVLIEGNVNDISKKLSDLFPS------------DNKDQLVGVESIIKEIESQL-LSGSTE 181
               EG   ++ ++ S                 DN+ +++  + I  ++ ++L ++ S +
Sbjct: 124 KKTCEGKTEEVKQRWSKALAYIATVAGEHSLNWDNEAEMI--QKIAIDVSNKLNVTPSRD 181

Query: 182 F-------NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI----RDESEKVGG-- 228
           F         +GIWG  GIGKTTIA A+++ + + F  S FM NI     D   ++    
Sbjct: 182 FEGMCDDVKMIGIWGPAGIGKTTIARALFNQLFTGFRHSCFMGNIDVNNYDSKLRLHNML 241

Query: 229 LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITT 279
           L+ I         HL      L   +VLIV  D+ DL+Q+++L      F PGSRVI+T 
Sbjct: 242 LSKILNQKDMKIHHLGAIEEWLRNQRVLIVLDDVDDLEQLEVLAKESFWFGPGSRVIVTL 301

Query: 280 RDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGV 339
           +D ++L  H    +  ++ V   S   +L +F  +AF Q+ P  GF EL+  V++    +
Sbjct: 302 KDKKILMAHG---INDIYHVDYPSQKKALEIFCLSAFKQSSPQDGFEELARKVVELCGNL 358

Query: 340 PLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF 399
           PLAL+V+GS   G SE+EW   +  ++      I+ VL+V YD L ++ Q++FL  ACFF
Sbjct: 359 PLALRVVGSSFYGESEDEWRLQLYGIETNLDRKIEHVLRVGYDKLLEKHQSLFLHIACFF 418

Query: 400 KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITMHDLLQEMGGEIVRQESIK 458
                  V   L       + G+  L  KSLV IS +  + MH LLQ++G ++V Q+S  
Sbjct: 419 NHESVDYVSTMLADSTLDVENGLKTLAAKSLVHISTHGLVRMHCLLQQLGRQVVVQQS-G 477

Query: 459 DPGKRSRLWHPEDIYQVLNENTSLPTG------------INLDSLKELYLGGCSNL---- 502
           +PGKR  L   ++I  VL   T    G             NL  LK  Y G  S L    
Sbjct: 478 EPGKRQFLVEAKEIRDVLANETMSKIGEFSIRKRVFEGMHNLKFLK-FYNGNVSLLEDMK 536

Query: 503 ---------------KRFP---EISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
                          KR P   +  C +E L L  + +E+L   I  L+ L  ++L   S
Sbjct: 537 YLPRLRLLHWDSYPRKRLPLTFQPECLVE-LYLVSSKLEKLWGGIQPLTNLKKINLEYSS 595

Query: 545 GLKSVS--SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMK 601
            LK +   S+  NL++LR   L+GC  L ++P  I NL  LE L+ +       IP+ + 
Sbjct: 596 NLKEIPNLSKATNLETLR---LTGCESLMEIPSSISNLHKLEVLDASGCSKLHVIPTKI- 651

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNS 643
            LS L  + + +C RL+S P++     I +   T +K    S
Sbjct: 652 NLSSLKMVGMDDCSRLRSFPDISTNIKILSIRGTKIKEFPAS 693



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 33/164 (20%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLDL 540
           +PT INL SLK + +  CS L+ FP+IS NI+ L ++ T I+E P+SI G L        
Sbjct: 647 IPTKINLSSLKMVGMDDCSRLRSFPDISTNIKILSIRGTKIKEFPASIVGGL-------- 698

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
               G+  + SR     SL+RL          +PE      S+ YL+L+  D + IP  +
Sbjct: 699 ----GILLIGSR-----SLKRLT--------HVPE------SVSYLDLSHSDIKMIPDYV 735

Query: 601 KQLSKLSDLRLQNCKRLQSLP-ELPCGSSIHARHCTSLKTLSNS 643
             L  L  L + NC++L S+    P   SI A  C SL+++  S
Sbjct: 736 IGLPHLQHLTIGNCRKLVSIEGHSPSLESIVAYRCISLESMCCS 779


>gi|13509209|emb|CAC35323.1| Ngc-A protein [Linum usitatissimum]
          Length = 1075

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 213/735 (28%), Positives = 347/735 (47%), Gaps = 130/735 (17%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGS 69
           +P  +++VFLSFRG DVR  F  HL  +L R KI TF D++ L +G  I PSL  AI  S
Sbjct: 26  LPSGEYEVFLSFRGPDVRQTFADHLYTSLVRSKIRTFRDEEGLQKGETIGPSLIQAITES 85

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQ-----IVVPVFYLVDPSDAGYCPS--- 121
           KI I I ++ YASS+WCL EL K++      G+     I++PVFY +DP D  +  S   
Sbjct: 86  KIYIPILTQNYASSKWCLQELAKMVNCWKNGGEAKGQHIIIPVFYFMDPRDVRHPDSGPY 145

Query: 122 ----------------LGWMGIFDIP-----------TSESVLIEGNVNDISKKLSDLFP 154
                           L W G                T +  +++    ++   L   + 
Sbjct: 146 KESFEQHNLKHDPETILEWKGALQEVGKMKGWHISELTGQGAVVDKIFTEVELHLRANY- 204

Query: 155 SDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
           +   D+LVG++  + E+   L   ST    +GI+G+G +GKTT+A+A+Y+ +S  FE   
Sbjct: 205 TLATDELVGIDFSVDEMVKLLNLDSTSEKIIGIYGMGRLGKTTLATAVYNKVSMQFERCC 264

Query: 215 FMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDL 253
           F+ NIR+   K  G+  +                      +   R R+SR K+ +V  D+
Sbjct: 265 FLDNIRETLLKNDGVVALQNKVISDILRKDFCQAKNASDGVQMIRERVSRHKIFVVLDDV 324

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            +  + D + G+L  F   SR ++TTRD + L+  RG +   +F+ + +S++ SL LFS+
Sbjct: 325 NESFRFDDIFGKLTAFSADSRFLVTTRDARTLERLRGCK---LFKHEGMSHDHSLKLFSK 381

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AFG ++P   +  L    ++  +G+PLAL+V+GS L    +  W+  + +LK +P +++
Sbjct: 382 HAFGVDYPPEDYASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWKDKLIELKAIPAVNV 441

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           Q  LK+SY+ L D E+ IFLD AC F G  + + +     C F     I  LV +SLV I
Sbjct: 442 QYRLKISYNELTDNEKQIFLDVACLFVGAKKEIPIYMWSDCGFYPTTTIRTLVQRSLVRI 501

Query: 434 SNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLDS 490
           ++N +  MHD ++++G  IV +ES ++  KRSR+W   D   +L   E       + +D 
Sbjct: 502 NDNEEFWMHDHIRDLGRAIVCEES-QNLYKRSRIWSNNDAIDILKNREGNDCVEALRVDM 560

Query: 491 LKELYLGGCSNLKRFP----------EISCNIED-------------------LDLKETA 521
             E +       K+F           ++S N ++                   L+L +  
Sbjct: 561 RGEGFALTNEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWLRVYHGDPCPSGLNLNKLM 620

Query: 522 IEELPSS-----------IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           I EL  S           I    +L  + L  C GL+ V   L   + L  L  S C ++
Sbjct: 621 ILELEVSDVTDSWEGWNEIKAAGKLKVVHLMCCKGLEKVPD-LSTCRGLELLRFSICRRM 679

Query: 571 E----------------------KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
                                   L  E+ +L++L+ L++      ++P+ + +LS L  
Sbjct: 680 HGELDIRNFKDLKVLDIFQTRITALKGEVESLQNLQQLDVGSSGLIEVPAGISKLSSLEY 739

Query: 609 LRLQNCK--RLQSLP 621
           L L N K  ++++LP
Sbjct: 740 LNLTNIKHDKVETLP 754


>gi|13509223|emb|CAC35331.1| N2-A protein [Linum usitatissimum]
          Length = 1075

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 213/735 (28%), Positives = 347/735 (47%), Gaps = 130/735 (17%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGS 69
           +P  +++VFLSFRG DVR  F  HL  +L R KI TF D++ L +G  I PSL  AI  S
Sbjct: 26  LPSGEYEVFLSFRGPDVRQTFADHLYTSLVRSKIRTFRDEEGLQKGETIGPSLIQAITES 85

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQ-----IVVPVFYLVDPSDAGYCPS--- 121
           KI I I ++ YASS+WCL EL K++      G+     I++PVFY +DP D  +  S   
Sbjct: 86  KIYIPILTQNYASSKWCLQELAKMVNCWKNGGEAKGQHIIIPVFYFMDPRDVRHPDSGPY 145

Query: 122 ----------------LGWMGIFDIP-----------TSESVLIEGNVNDISKKLSDLFP 154
                           L W G                T +  +++    ++   L   + 
Sbjct: 146 KESFEQHNLKHDPETILEWKGALQEVGKMKGWHISELTGQGAVVDKIFTEVELHLRANY- 204

Query: 155 SDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSY 214
           +   D+LVG++  + E+   L   ST    +GI+G+G +GKTT+A+A+Y+ +S  FE   
Sbjct: 205 TLATDELVGIDFSVDEMVKLLNLDSTSEKIIGIYGMGRLGKTTLATAVYNKVSMQFERCC 264

Query: 215 FMQNIRDESEKVGGLANIH---------------------LNFERRRLSRMKVLIVFYDL 253
           F+ NIR+   K  G+  +                      +   R R+SR K+ +V  D+
Sbjct: 265 FLDNIRETLLKNDGVVALQNKVISDILRKDFCQAKNASDGVQMIRERVSRHKIFVVLDDV 324

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            +  + D + G+L  F   SR ++TTRD + L+  RG +   +F+ + +S++ SL LFS+
Sbjct: 325 NESFRFDDIFGKLTAFSADSRFLVTTRDARTLERLRGCK---LFKHEGMSHDHSLKLFSK 381

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AFG ++P   +  L    ++  +G+PLAL+V+GS L    +  W+  + +LK +P +++
Sbjct: 382 HAFGVDYPPEDYASLCEEFVQVGSGLPLALKVIGSLLFRTEKSFWKDKLIELKAIPAVNV 441

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
           Q  LK+SY+ L D E+ IFLD AC F G  + + +     C F     I  LV +SLV I
Sbjct: 442 QYRLKISYNELTDNEKQIFLDVACLFVGAKKEIPIYMWSDCGFYPTTTIRTLVQRSLVRI 501

Query: 434 SNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLDS 490
           ++N +  MHD ++++G  IV +ES ++  KRSR+W   D   +L   E       + +D 
Sbjct: 502 NDNEEFWMHDHIRDLGRAIVCEES-QNLYKRSRIWSNNDAIDILKNREGNDCVEALRVDM 560

Query: 491 LKELYLGGCSNLKRFP----------EISCNIED-------------------LDLKETA 521
             E +       K+F           ++S N ++                   L+L +  
Sbjct: 561 RGEGFALTNEEFKQFSRLRFLEVLNGDLSGNFKNVLPSLRWLRVYHGDPCPSGLNLNKLM 620

Query: 522 IEELPSS-----------IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           I EL  S           I    +L  + L  C GL+ V   L   + L  L  S C ++
Sbjct: 621 ILELEVSDVTDSWEGWNEIKAAGKLKVVHLMCCKGLEKVPD-LSTCRGLELLRFSICRRM 679

Query: 571 E----------------------KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
                                   L  E+ +L++L+ L++      ++P+ + +LS L  
Sbjct: 680 HGELDIRNFKDLKVLDIFQTRITALKGEVESLQNLQQLDVGSSGLIEVPAGISKLSSLEY 739

Query: 609 LRLQNCK--RLQSLP 621
           L L N K  ++++LP
Sbjct: 740 LNLTNIKHDKVETLP 754



 Score = 39.7 bits (91), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 69/130 (53%), Gaps = 6/130 (4%)

Query: 479  NTSLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLV 536
            ++ LP   NL +L+ L + GC N     ++    ++E+L +  ++I +L   +  L +L 
Sbjct: 943  DSQLPDLTNLKNLRCLKICGCDNFIEITDLHTLESLEELRVMGSSIRKL--DLTGLVKLE 1000

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
             L   +C+ L  +   L  L+SL+RL++S C  +++LP  +  L+ L Y+ L +    K 
Sbjct: 1001 ILQFDSCTQLTEIRG-LGGLESLQRLHMSRCQSIKELP-NLSGLKILSYIILEKCRHLKE 1058

Query: 597  PSSMKQLSKL 606
               +++L +L
Sbjct: 1059 VYRLEELKRL 1068


>gi|357509573|ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
 gi|355500090|gb|AES81293.1| TMV resistance protein N [Medicago truncatula]
          Length = 1579

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 219/593 (36%), Positives = 311/593 (52%), Gaps = 64/593 (10%)

Query: 110 LVDPSDAGYCPSLGWMGIFDIP-TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESII 168
           +++PSD      L   GI       E+ LIE  V D+ KKL   F S   D+LVG++S I
Sbjct: 188 MIEPSDLIPLSGLEGSGIITFGFERETELIEEIVADVWKKLQPKF-SHYDDELVGIDSRI 246

Query: 169 KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG 228
             + S L + S E    GIWG+GGIGKTT+A  IY  I + F+ S F++N+R+ S +  G
Sbjct: 247 NNMCSLLRTDSEEIRFEGIWGMGGIGKTTLAKHIYKKIHNQFDVSCFLENVRELSSERDG 306

Query: 229 LANI------HLNFERRRLSRM--------------KVLIVFYDLTDLKQIDLLIGRLDG 268
           L  +      HL     R+  +              KVL+V  DL+   Q++ L G+   
Sbjct: 307 LLCLQRKLLSHLKISSMRIESLDQGKEIIRNLLFNKKVLLVLDDLSSDIQLENLAGK-QW 365

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           F PGSRVIITTRD  LL +     V  +++ + L+ ++SL LFS+ AF    P  GF+EL
Sbjct: 366 FGPGSRVIITTRDKHLLVS---LSVCEIYDAQILNSHESLQLFSQKAFRSGKPEEGFVEL 422

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           S   ++ A G+PLAL+VLGS+L G     WE A+  L++    DI K L++SYDGL D E
Sbjct: 423 SKQAVQCAGGIPLALKVLGSFLCGRKASVWEDALKMLQQDLQNDIYKTLRISYDGLRDME 482

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMG 448
           + IFLD ACFFKG+ +  V   L+ C  +  IGI  L+ KSL+T     + MHDLLQEMG
Sbjct: 483 KAIFLDIACFFKGSRKDHVTQILENCGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQEMG 542

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVLNEN----TSLPTGINLDSLKEL-----YLGGC 499
             IV  ES+ D GK+SRLW  +DI QVL  N    ++    +NL    E           
Sbjct: 543 RNIVLHESLNDAGKQSRLWSLKDIDQVLRNNKGTESTQAVVLNLSEAFEASWNPEAFAKM 602

Query: 500 SNLKRF---------PEISC---NIEDLDLKETAIEELPSSIGNLS-RLVDLDLTNCSGL 546
            NL+             + C    ++ L  KE  +E LP  IG+ S  LVDLD+ + S +
Sbjct: 603 GNLRLLMILNKLQLQHGLKCLPSGLKVLVWKECPLESLP--IGDQSDELVDLDMCH-SKI 659

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEY---LNLAEKDFEKIPSSMK 601
           K +      L +L+ +NL     L + P+  G  NLE L+    +NL E     + +S+ 
Sbjct: 660 KHLWKGTKLLGNLKTINLKNSKYLHQTPDFTGIPNLEKLDLEGCINLVE-----VHASLG 714

Query: 602 QLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSSTLLTRSS 651
            L K+S + L++CK L+SLP   E+     +    CTS++ L +    +T  S
Sbjct: 715 LLKKISYVTLEDCKNLKSLPGKLEMNSLKRLILTGCTSVRKLPDFGESMTNLS 767



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 71/111 (63%), Gaps = 1/111 (0%)

Query: 9   NMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIE 67
           N  P  K  VFLSFRG + R+ F  HL AA  R  +  F DD +L RG  I+P L ++IE
Sbjct: 5   NTSPSWKFHVFLSFRGVETRNKFTDHLYAAFIRTGLTVFKDDTELQRGQLIAPELLNSIE 64

Query: 68  GSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
            S  S+VI S  YASSRWCL+EL+ IL S+  +G+ V PVFY VDP+D  +
Sbjct: 65  QSLSSVVILSPDYASSRWCLDELLTILRSRIDFGRFVFPVFYDVDPTDVRH 115



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 84/152 (55%), Gaps = 6/152 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVD 537
           SLP  + ++SLK L L GC+++++ P+      N+  L L E  + ELP +IG L+ L  
Sbjct: 732 SLPGKLEMNSLKRLILTGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLTGLNS 791

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L +C  + S+      LKSL+RLNLSGC K  KLP+ +   E+LE LN++     ++P
Sbjct: 792 LLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVP 851

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE---LPCG 626
           SS+  L  L  L    CK L    E   LP G
Sbjct: 852 SSIVHLKNLISLLFHGCKGLARNSESSLLPLG 883



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 97/193 (50%), Gaps = 31/193 (16%)

Query: 481 SLP-TGINLDSLKELYLGGCSNLKRFPE-ISCN--IEDLDLKETAIEELPSSIGNLSRLV 536
           SLP T   L SLK L L GCS   + P+ +  N  +E L++  TAI E+PSSI +L  L+
Sbjct: 802 SLPDTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLI 861

Query: 537 DLDLTNCSGL------------------------KSVSSRLCNLKSLRRLNLSGC-LKLE 571
            L    C GL                        K +      L SL++L+LS C L  E
Sbjct: 862 SLLFHGCKGLARNSESSLLPLGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDE 921

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKI-PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-I 629
            +P+++G L SL  L+++  +F  +    + +L KL  L L +C+ LQSLP LP     +
Sbjct: 922 SIPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFV 981

Query: 630 HARHCTSLKTLSN 642
           +   C+SLK LS+
Sbjct: 982 NTSDCSSLKPLSD 994


>gi|13509211|emb|CAC35325.1| Ngc-B protein [Linum usitatissimum]
 gi|13509232|emb|CAC35336.1| Nbi-B protein [Linum usitatissimum]
          Length = 1108

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 231/757 (30%), Positives = 374/757 (49%), Gaps = 114/757 (15%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S   ++ ++P  +++VFLSFRG DVR  F  HL A L R KI TF D++ L +G  I  
Sbjct: 17  SSVDPTLPLLPSGEYEVFLSFRGPDVRQTFADHLYAWLVRSKIRTFRDEEGLQKGETIGS 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILES-KNKYG----QIVVPVFYLVDPSD 115
           SL  AI  SKI I I ++ YASS+WCL EL K+++  KN  G     I++PVFY +DP D
Sbjct: 77  SLIQAITESKIYIPILTQNYASSKWCLQELAKMVDCWKNGGGGKGQHIILPVFYFMDPRD 136

Query: 116 AGYCPSLGWMGIFDIPT----SESVL-----------IEG-NVNDISKK---LSDLFPSD 156
             +  S  +   F+        E++L           ++G ++N+++ +   +  +F + 
Sbjct: 137 VRHPDSGPYKEAFEQHNLKHDPETILEWKEALQDVGKMKGWHINELTGQGAVVDKIFTTI 196

Query: 157 N----------KDQLVGVESIIKEI-ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
                       D+LVG++S ++E+ E   L  ST    +GI+G+GG+GKTT+A A+++ 
Sbjct: 197 EFHLRANYTLATDELVGIDSSVEEVMELMNLDHSTSERIIGIYGMGGLGKTTLAKAVFNK 256

Query: 206 ISSHFEGSYFMQNIRD---ESEKVGGLANIHLNFERRRLSRM------------------ 244
           +S  FE   F+ NIR+    ++ V  L N  ++   R+ S                    
Sbjct: 257 VSMQFERCCFLDNIRETLLRNDGVVALQNKVISDILRKDSDQAKNASDGVRIIRERVRRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+ +V  D+ +    D + G+L  F   SR +ITTRD + L+     ++   F ++E+S+
Sbjct: 317 KIFVVLDDIDESFHFDEIFGKLGDFSTDSRFLITTRDARTLELLNECKM---FGLEEMSH 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SL LFS++AFG ++P   +  L    I+ A+G+PLAL+V+GS L    +  WE  + +
Sbjct: 374 DHSLQLFSKHAFGVDYPPEDYASLCEEFIQVASGLPLALKVIGSLLFKSDKRFWEDKLIE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK +P   +Q+ LKVSY+ L   E+ IFLD AC F G  + + M     C       +  
Sbjct: 434 LKAIPSAKVQERLKVSYNELTHNEKQIFLDIACLFVGAKKEVPMYMWSDCDLYPASTLRT 493

Query: 425 LVGKSLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTS 481
           LV +SLV + +N K  MHD ++++G  IVR+E+ ++P KRSR+W   D   +L   E   
Sbjct: 494 LVQRSLVRMDDNKKFWMHDHIRDLGRTIVREENSQNPYKRSRIWSNNDAIDILKNREGND 553

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP----------EISCNIEDL--DLKETAIEEL-PSS 528
               + +D   E Y       K+F           ++S N +++  +L+   +    PS 
Sbjct: 554 CVEALRVDMKGEGYALTNKEFKQFSRLRFLEVLNGDLSGNFKNILPNLRWLRVYRGDPSP 613

Query: 529 IG-NLSRLVDLDLTNCSGLKSVS--SRLCNLKSLRRLNLSGCLKLEKLPE---------- 575
            G NL++LV L+L  C    S    + +     L+ +NL+ C  LEK+P+          
Sbjct: 614 SGLNLNKLVILELDGCYVTHSWKGWNEIKAAGKLKVVNLTSCGILEKVPDLSTCRGLELL 673

Query: 576 ------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                       +IG  + L+ L++ + +   +   ++ L  L  L +        L E+
Sbjct: 674 CFHKCQWMRGELDIGTFKDLKVLDINQTEITTLKGEVESLQNLQQLDVGR----SGLIEV 729

Query: 624 PCG----SSIHARHCTSLK-----TLSNSSTLLTRSS 651
           P G    SS+     TS+K      L N   LL  SS
Sbjct: 730 PAGISKLSSLEFLDLTSVKHDEVEMLPNGLKLLVISS 766


>gi|357499531|ref|XP_003620054.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
 gi|355495069|gb|AES76272.1| Disease resistance-like protein GS3-3 [Medicago truncatula]
          Length = 1101

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 229/695 (32%), Positives = 342/695 (49%), Gaps = 106/695 (15%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVI 75
           DVF+SFRG D R  F  +L  AL  + I TFIDDK L  G+EI+PSL  +IE S+I+I+I
Sbjct: 19  DVFISFRGTDTRFGFTGNLYKALSDKGIHTFIDDKELPTGDEITPSLRKSIEESRIAIII 78

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------- 123
           FS+ YA+S +CL+ELV I+    +    V+PVFY  +PS     +  Y  +L        
Sbjct: 79  FSKNYATSSFCLDELVHIIHCFREKVTKVIPVFYGTEPSHVRKLEDSYGEALAKHEVEFQ 138

Query: 124 ---------------------WMGIFD--IPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                                W+ +F   +   E   IE  V D+S K++        + 
Sbjct: 139 NDMENMERLLKWKEALHQFHSWVPLFISILNKYEYKFIEEIVTDVSNKINRCH-LHVAEY 197

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIG-----KTTIASAIYSNISSHFEGSYF 215
           LVG+ES I E+ S L  G T+    G++ IG +G     KTT+A A+Y++I + FE   F
Sbjct: 198 LVGLESRISEVNSLLDLGCTD----GVYIIGILGTGGLGKTTLAEAVYNSIVNQFECRCF 253

Query: 216 MQNIRDESEK--------------VGGLANIHLNFE-----RRRLSRMKVLIVFYDLTDL 256
           + N+R+ S K              +G    +  + E     ++RL R KVL++  D+   
Sbjct: 254 LYNVRENSFKHSLKYLQEQLLSKSIGYDTPLEHDNEGIEIIKQRLCRKKVLLILDDVDKP 313

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q++ L+G    F  GSRVIITTRD  LL  H    +  ++E   L+  +SL L  +  F
Sbjct: 314 NQLEKLVGEPGWFGQGSRVIITTRDRYLLSCHG---ITKIYEADSLNKEESLELLRKMTF 370

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
             +   + +  + N  ++YA+G+PLAL+V+GS L G S  + ES ++K +R+P  DIQK+
Sbjct: 371 KND---SSYDYILNRAVEYASGLPLALKVVGSNLFGKSIADCESTLDKYERIPPEDIQKI 427

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           LKVS+D L++E+Q++FLD AC FKG D        +    SA               ++ 
Sbjct: 428 LKVSFDTLEEEQQSVFLDIACCFKGCDWQKFQRHFNFIMISAPDPY----------YTSY 477

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP----TGINLDSLK 492
            +T+HDL++ MG EIVRQESIK+PG+R+RLW  +DI  VL +NT         +N  S++
Sbjct: 478 IVTLHDLIEYMGIEIVRQESIKEPGERTRLWRHDDIAHVLKQNTGTSKIEMIYLNCSSME 537

Query: 493 ELYLGGCSNLKRFPEISCNIED----------------LDLKETAIEELPSSIGNLSRLV 536
            + +   +  K     +  IE                 L  K    E L        +L+
Sbjct: 538 PININEKAFKKMKKLKTLIIEKGYFSKGLKYLPKSLIVLKWKGFTSEPLSFCFSFKKKLM 597

Query: 537 DLDLT--NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDF 593
           +L +   +CS   +    +  L  L RL+   C  L  +   +G L  LE L+    +  
Sbjct: 598 NLRILTFDCSDYLTHIPDVSGLPELIRLSFQNCKNLTTIHNSVGYLYKLEILDATMCRKL 657

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
           +  P     L  L  L L  C+ L+S PEL C  S
Sbjct: 658 KSFPPLC--LPSLKKLELHFCRSLKSFPELLCKMS 690



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 7/99 (7%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK+L L  C +LK FPE+ C   NI+++ L +T+IEE+P S  NL+ L  L + +  
Sbjct: 665 LPSLKKLELHFCRSLKSFPELLCKMSNIKEIWLCDTSIEEMPFSFKNLNELQKLVIMD-K 723

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEK---LPEEIGNL 580
             K +   L     L  L L  C  LE+   +P  + NL
Sbjct: 724 NFKILPKCLSECHYLEHLYLDYCESLEEIRGIPPNLTNL 762


>gi|15238104|ref|NP_198969.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10178008|dbj|BAB11460.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007307|gb|AED94690.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1038

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 220/731 (30%), Positives = 344/731 (47%), Gaps = 124/731 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSS+ +      K+ VF SF G DVR  F+SHL      + I  F D ++ RG  I P
Sbjct: 1   MASSSTHVR-----KYHVFPSFHGSDVRRKFLSHLRFHFAIKGIVAFKDQEIERGQRIGP 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L  AI  S++S+V+ S+ Y SS WCL+ELV+IL+ K    QIV+P+FY +DPSD     
Sbjct: 56  ELVQAIRESRVSLVVLSKNYPSSSWCLDELVEILKCKEDQEQIVMPIFYEIDPSDVRKQS 115

Query: 117 --------------------------------GYCPSLGWMGIFDIPTSESVLIEGNVND 144
                                           G   SL W       T E+ +IE  V D
Sbjct: 116 GDFGKAFGKTCVGKTKEVKQRWTNALTEAANIGGEHSLNW-------TDEAEMIEKIVAD 168

Query: 145 ISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYS 204
           +S KL ++ PS + +++VG+++ +++++S L   S E   +GIWG  GIGKTTIA A+Y+
Sbjct: 169 VSNKL-NVIPSRDFEEMVGLDAHLRKLDSLLCLNSDEVKMIGIWGPAGIGKTTIARALYN 227

Query: 205 NISSHFEGSYFMQNIRDESEKVG-GLANIHLNFERRRLSRM------------------- 244
            +S++F+   FM N++   + +G    +  LN + + LS++                   
Sbjct: 228 QLSTNFQFKCFMGNLKGSYKSIGVDNYDWKLNLQNQLLSKILNQNDVKTDHLGGIKDWLE 287

Query: 245 --KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             KVLIV  D+ DL+Q+  L      F  GSR+I+TT+D  ++K    +   + + V   
Sbjct: 288 DKKVLIVIDDVDDLEQLLALAKEPSWFGSGSRIIVTTKDKTIMKTLLVND-NNFYHVGYP 346

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           +   +L +   +AF ++ P  GF EL+  V      +PL L V+GS L+G S+  W+   
Sbjct: 347 TNKVALEILCLSAFQKSFPRDGFEELARKVAYLCGNLPLCLSVVGSSLRGQSKHRWKLQS 406

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           ++L+      I+ VLK +Y+ L  +EQ +FL  ACFF      +V   L       + G+
Sbjct: 407 DRLETSLDRKIEDVLKSAYEKLSKKEQVLFLHIACFFNNTYISVVKTLLADSNLDVRNGL 466

Query: 423 SRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
             L  K LV IS  ++I MH LLQ++G  IV ++S  +P KR  L   E+I  VL   T 
Sbjct: 467 KTLADKCLVHISRVDRIFMHPLLQQLGRYIVLEQS-DEPEKRQFLVEAEEIRDVLANETG 525

Query: 482 LPT--GINLD-----------------------------SLKELYLGGCSNLKRFPEISC 510
             +  GI+ D                             S K++ L    ++K  P +  
Sbjct: 526 TGSVLGISFDMSKVSEFSISGRAFEAMRNLRFLRIYRRSSSKKVTLRIVEDMKYLPRLRL 585

Query: 511 ------------------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
                              +  L +  + +E+L   I +L+ L ++DL+    LK + + 
Sbjct: 586 LHWEHYPRKSLPRRFQPERLVVLHMPHSNLEKLWGGIQSLTNLKNIDLSFSRKLKEIPN- 644

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           L N  +L  L L  C  L +LP  I NL+ L+ L +      K+  +   L  L  + + 
Sbjct: 645 LSNATNLETLTLIKCSSLVELPSSISNLQKLKALMMFGCKMLKVVPTNINLVSLEKVSMT 704

Query: 613 NCKRLQSLPEL 623
            C +L S P++
Sbjct: 705 LCSQLSSFPDI 715



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 30/159 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL-SRLVDLDL 540
           +PT INL SL+++ +  CS L  FP+IS NI+ LD+ +T IEE+P S+    SRL  L L
Sbjct: 689 VPTNINLVSLEKVSMTLCSQLSSFPDISRNIKSLDVGKTKIEEVPPSVVKYWSRLDQLSL 748

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             C  LK                     +L  +P       S+  L+L+  D E IP  +
Sbjct: 749 -ECRSLK---------------------RLTYVPP------SITMLSLSFSDIETIPDCV 780

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
            +L++L  L ++ C++L SLP LP     + A HC SL+
Sbjct: 781 IRLTRLRTLTIKCCRKLVSLPGLPPSLEFLCANHCRSLE 819



 Score = 46.2 bits (108), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 26/162 (16%)

Query: 511 NIEDLDLK-ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
           N++++DL     ++E+P+ + N + L  L L  CS L  + S + NL+ L+ L + GC  
Sbjct: 627 NLKNIDLSFSRKLKEIPN-LSNATNLETLTLIKCSSLVELPSSISNLQKLKALMMFGCKM 685

Query: 570 LEKLPEEIGNLESLEY---------------------LNLAEKDFEKIPSS-MKQLSKLS 607
           L+ +P  I NL SLE                      L++ +   E++P S +K  S+L 
Sbjct: 686 LKVVPTNI-NLVSLEKVSMTLCSQLSSFPDISRNIKSLDVGKTKIEEVPPSVVKYWSRLD 744

Query: 608 DLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
            L L+ C+ L+ L  +P   ++ +   + ++T+ +    LTR
Sbjct: 745 QLSLE-CRSLKRLTYVPPSITMLSLSFSDIETIPDCVIRLTR 785


>gi|37574597|gb|AAQ93075.1| TIR-NBS-LRR type R protein 7 [Malus baccata]
          Length = 1095

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 186/508 (36%), Positives = 270/508 (53%), Gaps = 63/508 (12%)

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+ S I++I S+L SG +    VGIWG+GG+GKTT A AIY+ I   F+   F+ ++ +
Sbjct: 214 VGINSRIQDIISRLSSGGSNVIMVGIWGMGGLGKTTAAKAIYNQIHHEFQFKSFLPDVGN 273

Query: 222 ESEKVG------------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLK 257
            + K G                        G+  I   F  RR     VL++  ++ ++ 
Sbjct: 274 AASKHGLVYLQKELIYDILKTKSKISSVDEGIGLIEDQFRHRR-----VLVIMDNIDEVG 328

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+D ++G  D F PGSR+IITTRD  LLK     +V   +  ++L   ++L LFS +AFG
Sbjct: 329 QLDAIVGNPDWFGPGSRIIITTRDEHLLK-----QVDKTYVAQKLDEREALELFSWHAFG 383

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
            N P   +LELS  V+ Y  G+PLAL+VLGS+L      EW+S + KLKR P   I K L
Sbjct: 384 NNWPNEEYLELSEKVVSYCGGLPLALEVLGSFLFKRPIAEWKSQLEKLKRTPEGKIIKSL 443

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           ++S++GLDD ++ IFLD +CFF G D+  V   LD C F A IGIS L  + LVT+ +NK
Sbjct: 444 RISFEGLDDAQKAIFLDISCFFIGEDKDYVAKVLDGCGFYATIGISVLRERCLVTVEHNK 503

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--------ENTSLPTGINLD 489
           + MHDLL+EM   I+ ++S  DPGK SRLW   ++  VL         E  +LP G   D
Sbjct: 504 LNMHDLLREMAKVIISEKSPGDPGKWSRLWDKREVINVLTNKSGTEEVEGLALPWGYRHD 563

Query: 490 SLKELYLGGCSNLKRFPEIS-CNIE-------------DLDLKETAIEELPSSIGNLSRL 535
           +         +NLK+   +  C +E              L   E  ++ +P    N  +L
Sbjct: 564 T--AFSTEAFANLKKLRLLQLCRVELNGEYKHLPKELIWLHWFECPLKSIPDDFFNQDKL 621

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDF 593
           V L++   S L  V     +L +L+ L+LS    L+K P+  ++ NLE L   N   K+ 
Sbjct: 622 VVLEM-QWSKLVQVWEGSKSLHNLKTLDLSESRSLQKSPDFSQVPNLEELILYNC--KEL 678

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +I  S+  L +LS + L+ C +L SLP
Sbjct: 679 SEIHPSIGHLKRLSLVNLEWCDKLISLP 706



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 56/100 (56%), Positives = 75/100 (75%), Gaps = 1/100 (1%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGSKISIV 74
           +D+FLSFRG+D R+ F  HL+AAL     + ++D D LNRG EI   L  AIEGS+ISI+
Sbjct: 23  YDLFLSFRGEDTRNGFTGHLHAALKDRGYQAYMDQDDLNRGEEIKEELFRAIEGSRISII 82

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
           +FS+ YA S WCL+ELVKI+E ++K G+ V+P+FY VDPS
Sbjct: 83  VFSKRYADSSWCLDELVKIMECRSKLGRHVLPIFYHVDPS 122



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 91/162 (56%), Gaps = 7/162 (4%)

Query: 490 SLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           S++ L L GC  L+   E      ++  L+ + T I E+P SI  L  L  L L++   +
Sbjct: 714 SVEALLLNGCLILRELHEDIGEMISLRTLEAEYTDIREVPPSIVRLKNLTRLSLSSVESI 773

Query: 547 KSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
               S L  L SLR LNLS   L  +++P+++G+L SL+ LNL   DF  +P S+  LSK
Sbjct: 774 HLPHS-LHGLNSLRELNLSSFELADDEIPKDLGSLISLQDLNLQRNDFHTLP-SLSGLSK 831

Query: 606 LSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
           L  LRL +C++L+++ +LP     + A  C +L+T+ N S +
Sbjct: 832 LETLRLHHCEQLRTITDLPTNLKFLLANGCPALETMPNFSEM 873



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 11/161 (6%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           +L +LK L L    +L++ P+ S   N+E+L L     + E+  SIG+L RL  ++L  C
Sbjct: 640 SLHNLKTLDLSESRSLQKSPDFSQVPNLEELILYNCKELSEIHPSIGHLKRLSLVNLEWC 699

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L S+       KS+  L L+GCL L +L E+IG + SL  L     D  ++P S+ +L
Sbjct: 700 DKLISLPGDFYKSKSVEALLLNGCLILRELHEDIGEMISLRTLEAEYTDIREVPPSIVRL 759

Query: 604 SKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSS 644
             L+ L L + + +  LP      S+H     SL+ L+ SS
Sbjct: 760 KNLTRLSLSSVESIH-LPH-----SLHG--LNSLRELNLSS 792


>gi|4588068|gb|AAD25975.1|AF093648_2 flax rust resistance protein [Linum usitatissimum]
          Length = 1291

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 180/530 (33%), Positives = 278/530 (52%), Gaps = 64/530 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           ++ S++     P  +++VFLSFRG D R  F   L   LCR KI TF DD +L +G EI 
Sbjct: 46  ISDSTNPSGSFPSVEYEVFLSFRGPDTREQFTDFLYHFLCRYKIHTFRDDDELRKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDL----FPSDNK------------- 158
              C    +    +    E++    N  D  KK+ DL       D+K             
Sbjct: 166 QTGCYKKAFRKHANKFNGETI---QNWKDALKKVGDLKGWHIGKDDKQGAIADEVLADIW 222

Query: 159 ------------DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
                       D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ I
Sbjct: 223 SHISKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKI 282

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIHLNFE-----------------------RRRLSR 243
           SS F+   F+ NIR+  ++  G+  +                            + R+SR
Sbjct: 283 SSCFDCCCFIDNIRETQDQKDGVVVLQKKLVSEILRIDSGSVGFINDSGGRKMIKERVSR 342

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            K+L+V  D+ +  + + ++G    F+  SR IIT+R V++L     ++   ++EV  LS
Sbjct: 343 FKILVVLDDVDEKFKFEDMLGNHKDFISQSRFIITSRSVRVLSTLNENQC-KLYEVGSLS 401

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
              SL LFS++AF +N P + +  L+N V+  A G+PL L+V+GS L       WE  + 
Sbjct: 402 KPHSLELFSKHAFKKNTPPSYYETLANDVVYTAAGLPLTLKVIGSLLFKQEIAVWEDTLE 461

Query: 364 KLKRMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           +L+R  ++D +   LK+SYD L  E + IFLD ACFF G ++         C F     I
Sbjct: 462 QLRRTLNLDEVYDRLKISYDALKPEAKEIFLDIACFFIGKNKEEPYYMWTDCNFYPASNI 521

Query: 423 SRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           + L+ K ++ +  ++K  MHD L++MG EIVR+E ++ P KRSR+W  E+
Sbjct: 522 TFLIQKCMIQVGDDDKFKMHDQLRDMGREIVRREDVR-PWKRSRIWSREE 570



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 33/229 (14%)

Query: 444  LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLK 503
            LQ++   +V+  S+++      L   +D+Y  L   TSL   + L+ LKEL +GGC +L 
Sbjct: 1064 LQKLTTLVVKVPSLREIEGLEELKSLQDLY--LEGCTSLGR-LRLEKLKELDIGGCPDLT 1120

Query: 504  RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK--SVSSRLCNLKSLRR 561
                                EL  ++  +  L  L + +C  L+   +   L N   L  
Sbjct: 1121 --------------------ELVQTVVAVPSLRGLTIRDCPRLEVGPMIQSLPNFPMLDE 1160

Query: 562  LNLSGCLKLEKLPEEIGNLESLEYLNLAEKD----FEKIPSSMKQLSKLSDLRLQ--NCK 615
            L LS  +  E   + IG+LE L  L L   D     E+I +S+ +L KL+ L ++  + +
Sbjct: 1161 LTLSMVIITEDDLDVIGSLEELGRLELVLDDTSSGIERI-ASLSKLQKLTTLIVEVPSLR 1219

Query: 616  RLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
             ++ L EL     ++ + CTSL+ L      L    K ++I N   C +
Sbjct: 1220 EIEGLAELKSLQRLYLQRCTSLERLWPDQQQLGSLEKLYEI-NIRGCKS 1267



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 12/122 (9%)

Query: 504 RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
           RFP+   +IE L +   AIE +   IG L +L  L L +C   K        LK L  LN
Sbjct: 705 RFPK---SIEVLSM--IAIEMVEVDIGELKKLKTLVLESCKIQKISGGTFGMLKGLIELN 759

Query: 564 LSG--CLKLEKLPEEIGNLESLEYLN---LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           L    C  L ++  +IG L SL+ L    + E + ++ PS +K+LS  S  R+ N  +L 
Sbjct: 760 LQSLKCTNLREVVADIGQLSSLKVLKTPGVEEVEIKEFPSGLKELSTSS--RIPNLSQLL 817

Query: 619 SL 620
            L
Sbjct: 818 DL 819


>gi|3947733|emb|CAA08797.1| NL25 [Solanum tuberosum]
          Length = 533

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 184/516 (35%), Positives = 272/516 (52%), Gaps = 62/516 (12%)

Query: 13  HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKI 71
           H K+ VFLSFRG D R  F SHL   L    I TF DDK L +G+ I   L  AIE S++
Sbjct: 18  HWKYHVFLSFRGDDTRKTFTSHLFEGLKHRGIFTFQDDKRLEKGDSIPEELLKAIEESQV 77

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA--------------- 116
           ++VIFS+ YA+SRWCLNELVKI+E K    QIV+PVFY VDPSD                
Sbjct: 78  ALVIFSKNYATSRWCLNELVKIMECKEVKKQIVMPVFYDVDPSDVRHQTGSFAEAFSKHK 137

Query: 117 --------GYCPSLGWMGIF---------DIPTS-ESVLIEGNVNDISKKLSDLFPSDNK 158
                   G     GW             ++P   ES  I   V+ +S KL     S + 
Sbjct: 138 SRYKDDVDGMQMVQGWRTALSAAADLSGTNVPGRIESECIRELVDAVSSKLCKT-SSSSS 196

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           +  VG+++ +KE++S L   S +   +GIWG+GG+GKTT+A A++  +S  F+ + F++N
Sbjct: 197 EYTVGIDTHLKEVKSLLEMESGDVRILGIWGMGGVGKTTLARAVFDTLSPRFQYASFLEN 256

Query: 219 IRD----------------ESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
           +++                E +K             +RL  MKVLIV  D+     ++ L
Sbjct: 257 VKETNINEIQNKLLSELLREDKKHVDNKTEGKRLMAKRLRFMKVLIVLDDINHCDHLEYL 316

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF-GQNHP 321
            G L  F  GSR+I TTR+ ++L  +       V +V  L   D++ LF+  AF G   P
Sbjct: 317 AGDLCWFGSGSRIIATTRNREILGMNNV-----VHQVTTLLEPDAIQLFNHYAFKGLFSP 371

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
                +L+   + +A G+PLAL++ G +L    +  W  AV+ ++R    D+   LK+S+
Sbjct: 372 DEHMKKLALEAVSHAKGLPLALKLWGIWLNNKDKTLWREAVDMIRRESSEDVVNNLKISF 431

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITM 440
           +GL D+E+ IFLD ACFF+G  +   +  L +    A I +  ++ KSLV+IS    + M
Sbjct: 432 EGLQDKEKTIFLDIACFFRGMRKDKTIEILKSYDLDAHIRLHGIIEKSLVSISEYETLQM 491

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           HDL+Q+MG  +V+++     G RSR+W+ ED   V+
Sbjct: 492 HDLIQDMGRYVVKEQ----KGSRSRVWNVEDFEDVM 523


>gi|87241451|gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 213/568 (37%), Positives = 302/568 (53%), Gaps = 63/568 (11%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           E+ LIE  V D+ KKL   F S   D+LVG++S I  + S L + S E    GIWG+GGI
Sbjct: 30  ETELIEEIVADVWKKLQPKF-SHYDDELVGIDSRINNMCSLLRTDSEEIRFEGIWGMGGI 88

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANI------HLNFERRRLSRM--- 244
           GKTT+A  IY  I + F+ S F++N+R+ S +  GL  +      HL     R+  +   
Sbjct: 89  GKTTLAKHIYKKIHNQFDVSCFLENVRELSSERDGLLCLQRKLLSHLKISSMRIESLDQG 148

Query: 245 -----------KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
                      KVL+V  DL+   Q++ L G+   F PGSRVIITTRD  LL +     V
Sbjct: 149 KEIIRNLLFNKKVLLVLDDLSSDIQLENLAGK-QWFGPGSRVIITTRDKHLLVS---LSV 204

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
             +++ + L+ ++SL LFS+ AF    P  GF+ELS   ++ A G+PLAL+VLGS+L G 
Sbjct: 205 CEIYDAQILNSHESLQLFSQKAFRSGKPEEGFVELSKQAVQCAGGIPLALKVLGSFLCGR 264

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
               WE A+  L++    DI K L++SYDGL D E+ IFLD ACFFKG+ +  V   L+ 
Sbjct: 265 KASVWEDALKMLQQDLQNDIYKTLRISYDGLRDMEKAIFLDIACFFKGSRKDHVTQILEN 324

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           C  +  IGI  L+ KSL+T     + MHDLLQEMG  IV  ES+ D GK+SRLW  +DI 
Sbjct: 325 CGLNPLIGIDVLIEKSLITYDGWHLGMHDLLQEMGRNIVLHESLNDAGKQSRLWSLKDID 384

Query: 474 QVLNEN----TSLPTGINLDSLKEL-----YLGGCSNLKRF---------PEISC---NI 512
           QVL  N    ++    +NL    E            NL+             + C    +
Sbjct: 385 QVLRNNKGTESTQAVVLNLSEAFEASWNPEAFAKMGNLRLLMILNKLQLQHGLKCLPSGL 444

Query: 513 EDLDLKETAIEELPSSIGNLS-RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           + L  KE  +E LP  IG+ S  LVDLD+ + S +K +      L +L+ +NL     L 
Sbjct: 445 KVLVWKECPLESLP--IGDQSDELVDLDMCH-SKIKHLWKGTKLLGNLKTINLKNSKYLH 501

Query: 572 KLPEEIG--NLESLEY---LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---EL 623
           + P+  G  NLE L+    +NL E     + +S+  L K+S + L++CK L+SLP   E+
Sbjct: 502 QTPDFTGIPNLEKLDLEGCINLVE-----VHASLGLLKKISYVTLEDCKNLKSLPGKLEM 556

Query: 624 PCGSSIHARHCTSLKTLSNSSTLLTRSS 651
                +    CTS++ L +    +T  S
Sbjct: 557 NSLKRLILTGCTSVRKLPDFGESMTNLS 584



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 84/152 (55%), Gaps = 6/152 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVD 537
           SLP  + ++SLK L L GC+++++ P+      N+  L L E  + ELP +IG L+ L  
Sbjct: 549 SLPGKLEMNSLKRLILTGCTSVRKLPDFGESMTNLSTLALDEIPLAELPPTIGYLTGLNS 608

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L +C  + S+      LKSL+RLNLSGC K  KLP+ +   E+LE LN++     ++P
Sbjct: 609 LLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVP 668

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE---LPCG 626
           SS+  L  L  L    CK L    E   LP G
Sbjct: 669 SSIVHLKNLISLLFHGCKGLARNSESSLLPLG 700



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 97/193 (50%), Gaps = 31/193 (16%)

Query: 481 SLP-TGINLDSLKELYLGGCSNLKRFPE-ISCN--IEDLDLKETAIEELPSSIGNLSRLV 536
           SLP T   L SLK L L GCS   + P+ +  N  +E L++  TAI E+PSSI +L  L+
Sbjct: 619 SLPDTFSKLKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLI 678

Query: 537 DLDLTNCSGL------------------------KSVSSRLCNLKSLRRLNLSGC-LKLE 571
            L    C GL                        K +      L SL++L+LS C L  E
Sbjct: 679 SLLFHGCKGLARNSESSLLPLGRIFGFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDE 738

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKI-PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-I 629
            +P+++G L SL  L+++  +F  +    + +L KL  L L +C+ LQSLP LP     +
Sbjct: 739 SIPDDLGCLSSLVTLDISGNNFVNLRDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFV 798

Query: 630 HARHCTSLKTLSN 642
           +   C+SLK LS+
Sbjct: 799 NTSDCSSLKPLSD 811


>gi|105923156|gb|ABF81460.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 697

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 263/491 (53%), Gaps = 68/491 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           MA   SS   IP   +DVFLSFRG+D R  F  HL AAL + KI TF DD +L RG EIS
Sbjct: 55  MAEPESS-RSIPEWTYDVFLSFRGEDTRKTFTDHLYAALVQAKIHTFRDDDELPRGEEIS 113

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPSD--- 115
             +  AI+ SKISIV+FS+GYASSRWCL+ELV+IL+ K  K GQIV+P+FY +DP D   
Sbjct: 114 DHVLRAIQESKISIVVFSKGYASSRWCLDELVEILKCKRKKTGQIVLPIFYDIDPLDVRK 173

Query: 116 --AGYCPSL--------------------------GWMGIFDIPTS-ESVLIEGNVNDIS 146
               +  +                           GW  + D+    E+  ++  + D+ 
Sbjct: 174 QTGRFAEAFVKHEERFEEKLVKEWRKALKEAGNLSGW-NLNDMANGPEANFVKEIIKDVL 232

Query: 147 KKL--SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYS 204
            KL    L+  ++   LVG++ + + I   L +   +   VGI G+ GIGKTTIA  +++
Sbjct: 233 NKLGPKHLYVPEH---LVGMDRLSRNIFYFLSTAIDDVQIVGIHGMLGIGKTTIAKVVFN 289

Query: 205 NISSHFEGSYFMQNIRDESEKVGGLANIHLNFE---------------------RRRLSR 243
            + + FEGS F+ +I ++S++  GLA +                          + RL R
Sbjct: 290 QLCNGFEGSCFLSDINEKSKQFNGLALLQEQLLHNILKQDVANINCVDRGKVLIKERLCR 349

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            +VL+V  D+    Q++ L+G    F PGSRVIITTRD  LL+            ++EL 
Sbjct: 350 KRVLLVADDVARQDQLNALMGERSWFGPGSRVIITTRDSNLLRE-----ADQTNRIEELE 404

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            +++L LFS +AF    PA  ++ELS   + Y  G+P AL+V+G+ L G +   WES ++
Sbjct: 405 PDEALQLFSWHAFKDTKPAKDYIELSKKAVDYCGGLPFALEVIGARLSGKNRVTWESEID 464

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGI 422
            L R+P+ DIQ  L  SY  LD E Q  FLD ACFF G ++  V   L A C ++ ++ +
Sbjct: 465 NLSRIPNQDIQGKLLTSYHALDGELQRAFLDIACFFIGKEKEYVAKLLGARCGYNPEVVL 524

Query: 423 SRLVGKSLVTI 433
             L  +S++ +
Sbjct: 525 ETLHERSMIKV 535


>gi|357474807|ref|XP_003607689.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508744|gb|AES89886.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1043

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 226/688 (32%), Positives = 342/688 (49%), Gaps = 104/688 (15%)

Query: 1   MASSS--SSINMIPHPK-----HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KL 52
           MASS+  SS+ ++  PK     +DVF+SFRG+D R+NF   L  AL  + +  F DD  L
Sbjct: 1   MASSNNPSSLALVTLPKKKKNFYDVFVSFRGEDTRNNFTDFLFDALEEKGVFAFRDDTNL 60

Query: 53  NRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVD 112
            +G  I+P L  AIEGS++ +V+ S+ YA S WCL EL  IL       + V+PVFY VD
Sbjct: 61  QKGESIAPELFHAIEGSQVFVVVLSKNYAFSTWCLKELEYILCCVQASKKYVLPVFYDVD 120

Query: 113 PS-----DAGYCPS---------------LGWMG----IFDIP------TSESVLIEGNV 142
           PS        Y  +               L W      + D+         +S+ I+  V
Sbjct: 121 PSLVRKQTGIYSEAFVQHGHRFKQDSQMVLRWRAALTQVADLSGWDLRDKRQSLEIKKIV 180

Query: 143 NDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASA 201
             I   L     S   + LVG++S  +E+E  LL  S +  + VGI G+GGIGKTT+   
Sbjct: 181 QRIITILDSKLSSSASNDLVGMDSPRQELEKLLLLDSVDDVHVVGICGMGGIGKTTLGMV 240

Query: 202 IYSNISSHFEGSYFM----------------------QNIRDESEKVGGLANIHLNFERR 239
           +Y  IS  F    F+                      Q + +   ++  L+    N  RR
Sbjct: 241 LYDRISHQFGACCFIDDVSKMFRLHDGPLDVQKQILHQTLGENHNQICNLSTAS-NLIRR 299

Query: 240 RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEV 299
           RL R +VL++F ++  ++Q++ +    +    GS++II +RD  +LKN+    V  V++V
Sbjct: 300 RLCRQRVLMIFDNVDKVEQLEKIGVCREWLGEGSKIIIISRDEHILKNYG---VDEVYKV 356

Query: 300 KELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWE 359
             L + +SL L  R AF  +H    +  L N ++ YANG+PLA++VLGS+L G    EW 
Sbjct: 357 PLLDWTNSLQLLCRKAFKLDHILNSYEGLVNGILHYANGLPLAIKVLGSFLFGRDISEWR 416

Query: 360 SAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
           SA+ +LK  P  D+  VL++S+DGL ++E+ IFL  ACFF       + N L+ C F A 
Sbjct: 417 SALARLKESPEKDVMDVLRLSFDGLKEQEKEIFLHIACFFNQVWGKYLKNVLNCCGFHAD 476

Query: 420 IGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ---- 474
           IG+  L+ KSL++I ++  I MH LL+E+G EIV++ S K+     R+W  + +      
Sbjct: 477 IGLRVLIDKSLISIDADGFIHMHGLLEELGREIVQENSSKEQRNWRRIWFVKQVNDVMLE 536

Query: 475 ---------VLNENTSLPTGINLDSLKELYLGGCSNLK----RFP-----EISCNIEDL- 515
                    VLN          + ++ E +L    +L+    R P      +SC  ++L 
Sbjct: 537 KMEKNVEAIVLNHENDGEDDAKMVTIVE-HLSKMRHLRLLIVRCPVNTSGNLSCFSKELR 595

Query: 516 --DLKETAIEELPSSIGNLSRLVDLDLTNCS-----GLKSVSSRLCNL------KSLRRL 562
             +  E   + LPSS  + ++LV+L L   S       KS S  L  +       +L RL
Sbjct: 596 YVEWSEYPFKYLPSSFDS-NQLVELILEYSSIEQLWKGKSHSKNLIKMPHFGEFPNLERL 654

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAE 590
           +L GC+KL +L   +  L  L YLNL +
Sbjct: 655 DLEGCIKLVQLDPSLSLLTKLVYLNLKD 682



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 47/185 (25%)

Query: 490 SLKELYLGGC--SNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           S+++L+ G     NL + P      N+E LDL+    + +L  S+  L++LV L+L +C 
Sbjct: 625 SIEQLWKGKSHSKNLIKMPHFGEFPNLERLDLEGCIKLVQLDPSLSLLTKLVYLNLKDCK 684

Query: 545 ---GLKSVSSRLCNLK-------------------------------------SLRRLNL 564
              GL S + R  N++                                     SL  LNL
Sbjct: 685 CIIGLLSNNPRPLNIRASHSSSTTPSSLKRNMLPKHSSLQTPTTHTNLFSSLHSLCELNL 744

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           S C  L ++P  IG L  LE LNL   +F  +PS +++LSKL  L L++CK L+SLP LP
Sbjct: 745 SFC-NLLQIPNAIGCLYWLEALNLGGNNFVTVPS-LRELSKLVYLSLEHCKLLKSLPVLP 802

Query: 625 CGSSI 629
             ++I
Sbjct: 803 SPTAI 807


>gi|13509225|emb|CAC35332.1| N2-B protein [Linum usitatissimum]
          Length = 1108

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 230/757 (30%), Positives = 374/757 (49%), Gaps = 114/757 (15%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISP 60
           +S   ++ ++P  +++VFLSFRG DVR  F  HL A L R KI TF D++ L +G  I  
Sbjct: 17  SSVDPTLPLLPSGEYEVFLSFRGPDVRQTFADHLYAWLVRSKIRTFRDEEGLQKGETIGS 76

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILES-KNKYG----QIVVPVFYLVDPSD 115
           SL  AI  SKI I I ++ YASS+WCL EL K+++  KN  G     I++PVFY +DP D
Sbjct: 77  SLIQAITESKIYIPILTQNYASSKWCLQELAKMVDCWKNGGGGKGQHIILPVFYFMDPRD 136

Query: 116 AGYCPSLGWMGIFDIPT----SESVL-----------IEG-NVNDISKK---LSDLFPSD 156
             +  S  +   F+        E++L           ++G ++N+++ +   +  +F + 
Sbjct: 137 VRHPDSGPYKEAFEQHNLKHDPETILEWKEALQDVGKMKGWHINELTGQGAVVDKIFTTI 196

Query: 157 N----------KDQLVGVESIIKEI-ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
                       D+LVG++S ++E+ E   L  ST    +GI+G+GG+GKTT+A A+++ 
Sbjct: 197 EFHLRANYTLATDELVGIDSSVEEVMELMNLDHSTSERIIGIYGMGGLGKTTLAKAVFNK 256

Query: 206 ISSHFEGSYFMQNIRD---ESEKVGGLANIHLNFERRRLSRM------------------ 244
           +S  FE   F+ NIR+    ++ V  L N  ++   R+ S                    
Sbjct: 257 VSMQFERCCFLDNIRETLLRNDGVVALQNKVISDILRKDSDQAKNASDGVRIIRERVRRH 316

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           K+ +V  D+ +    D + G+L  F   SR +ITTRD + L+     ++   F ++E+S+
Sbjct: 317 KIFVVLDDIDESFHFDEIFGKLGDFSTDSRFLITTRDARTLELLNECKM---FGLEEMSH 373

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           + SL LFS++AFG ++P   +  L    I+ A+G+PLAL+V+GS L    +  WE  + +
Sbjct: 374 DHSLQLFSKHAFGVDYPPEDYASLCEEFIQVASGLPLALKVIGSLLFKSDKRFWEDKLIE 433

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           LK +P   +Q+ LKVSY+ L   E+ IFLD AC F G  + + M     C       +  
Sbjct: 434 LKAIPSAKVQERLKVSYNELTHNEKQIFLDIACLFVGAKKEVPMYMWSDCDLYPASTLRT 493

Query: 425 LVGKSLVTISNNKI-TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTS 481
           LV +SLV + +NK+  MHD ++++G  IVR+E+ ++P KRSR+W   D   +L   E   
Sbjct: 494 LVQRSLVRMDDNKMFWMHDHIRDLGRTIVREENSQNPYKRSRIWSNNDAIDILKNREGND 553

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP----------EISCNIEDL--DLKETAIEEL-PSS 528
               + +D   E Y        +F           ++S N +++  +L+   +    PS 
Sbjct: 554 CVEALRVDMKGEGYALTNKEFNQFSRLRFLEVLNGDLSGNFKNILPNLRWLRVYRGDPSP 613

Query: 529 IG-NLSRLVDLDLTNCSGLKSVS--SRLCNLKSLRRLNLSGCLKLEKLPE---------- 575
            G NL++LV L+L  C    S    + +     L+ +NL+ C  LEK+P+          
Sbjct: 614 SGLNLNKLVILELDGCYVTHSWKGWNEIKAAGKLKVVNLTSCGILEKVPDLSTCRGLELL 673

Query: 576 ------------EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                       +IG  + L+ L++ + +   +   ++ L  L  L +        L E+
Sbjct: 674 CFHKCQWMRGELDIGTFKDLKVLDINQTEITTLKGEVESLQNLQQLDVGR----SGLIEV 729

Query: 624 PCG----SSIHARHCTSLK-----TLSNSSTLLTRSS 651
           P G    SS+     TS+K      L N   LL  SS
Sbjct: 730 PAGISKLSSLEFLDLTSVKHDEVEMLPNGLKLLVISS 766


>gi|297794605|ref|XP_002865187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311022|gb|EFH41446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1162

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 234/736 (31%), Positives = 345/736 (46%), Gaps = 129/736 (17%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPS 61
           +SSS+S N +    +DVF SF G+DVR  F+SH    L R+ I  F D+++ R   + P 
Sbjct: 3   SSSSTSRNWV----YDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPE 58

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----- 116
           L  AI  S+I++V+FSE Y SS WCL+EL++I+  K + GQ+V+PVFY +DPS A     
Sbjct: 59  LKQAIRTSRIAVVVFSEKYPSSSWCLDELLEIVRCKEELGQLVIPVFYGLDPSHARKQTG 118

Query: 117 -------GYC-------PSLGWMGIFDIPT----------SESVLIEGNVNDISKKLSDL 152
                    C         L    + D+            +E+ +IE   N++  KL+ +
Sbjct: 119 KFGEAFVKTCQRKTEDETKLWRQSLTDVANVLGYHSQNWPNEAQMIEAIANNVLGKLNSI 178

Query: 153 FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
             +D KD  VG+E  I ++ + L   S E   VGIWG  GIGKT+IA  +YS +S  F+ 
Sbjct: 179 PTNDFKD-FVGMEDHIAKMSALLHLESKEVRMVGIWGSSGIGKTSIARVLYSRLSHRFQS 237

Query: 213 SYFMQ-------------------NIRDESEKVGGLANI---------HLNFERRRLSRM 244
           S F+                    N++   +KV  L+ I         HL     RL   
Sbjct: 238 SVFVDRAFISKSTEIYNSANSDDYNMKLHLQKVF-LSKILDKKDIKIHHLGAVEERLKHH 296

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KVLI   DL D   +D L G    F  GSR+I+ T+D   L+ H    + +++ V   S 
Sbjct: 297 KVLIFIDDLDDQVVLDTLAGLTQWFGYGSRIIVITKDKHFLRAHG---IEYIYNVCLPSN 353

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
             +L +F R+AF +N+P  G +EL++ V   A  +PL L VLGS+L+G  +E+    + +
Sbjct: 354 ELALKIFCRSAFRKNYPPDGLMELASEVALCAGNLPLGLNVLGSHLRGRDKEDLMDMLPR 413

Query: 365 LKRMPHMDIQKVLKVSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           L+      I+K L+VSY+GL+++ ++ IF   AC F G     +   L        IG+ 
Sbjct: 414 LRNGLDGKIEKTLRVSYNGLNNQKDKAIFRHIACLFNGEKVDDIKLLLADSGLDVNIGLK 473

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-- 481
            LV KSL+ +    + MH LLQEMG EIVR +S  +PG+R  L   +DI  +L ++T   
Sbjct: 474 NLVDKSLIHVREEIVEMHSLLQEMGKEIVRSQS-NEPGEREFLMDAKDICDLLEDSTGTK 532

Query: 482 -----------------------------------------------LPTGINL--DSLK 492
                                                          LP G N     L+
Sbjct: 533 KVLGITLDMDEIDELHIHENAFKGMHNLLFLKVYTKKWDKKTEVRWHLPKGFNYLPHKLR 592

Query: 493 ELYLGG----CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKS 548
            L L G    C   K  PE   N+  L++  + +E L   + +   L D+DL     LK 
Sbjct: 593 FLRLDGYPMRCMPSKFRPE---NLVKLEMSGSKLERLWEGVHSFRGLRDIDLQKSENLKE 649

Query: 549 VSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLS 607
           +   L    SL+ LNL  C  L +LP  I  L  LE L ++   + E +P  +  L  L 
Sbjct: 650 IPD-LSMATSLKTLNLCDCSNLVELPLSIQYLNKLEKLEMSGCINLENLPIGI-NLKSLG 707

Query: 608 DLRLQNCKRLQSLPEL 623
            L L  C RL+  P++
Sbjct: 708 RLNLGGCSRLKIFPDI 723



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 26/171 (15%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LP GINL SL  L LGGCS LK FP+IS NI  L L ET IE  PS++           
Sbjct: 696 NLPIGINLKSLGRLNLGGCSRLKIFPDISTNISWLILDETGIETFPSNL----------- 744

Query: 541 TNCSGLKSVSSRLCNLKSLR---RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
                L+++   LC +KS +   R+       +  LP  +  L   +  +L E     +P
Sbjct: 745 ----PLENLFLHLCEMKSEKLWGRVQQPLTPLMTILPHSLARLFLSDIPSLVE-----LP 795

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTSLKTLSNSST 645
           +S++  +KL+ L ++NC  L++LP     P    +  R C+ L+T  + ST
Sbjct: 796 ASIQNFTKLNRLAIENCINLETLPSGINFPLLLDLDLRGCSRLRTFPDIST 846



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 54/92 (58%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LP+GIN   L +L L GCS L+ FP+IS NI  L++  T IEE+P  I   S LV L +
Sbjct: 817 TLPSGINFPLLLDLDLRGCSRLRTFPDISTNIYMLNVPRTGIEEVPWWIEKFSNLVRLCM 876

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
             C+ L+ VS  +  LK L  ++ S C  L K
Sbjct: 877 GGCNKLQCVSLHISKLKHLGDVDFSDCGALTK 908



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
           ++ ELP+SI N ++L  L + NC  L+++ S + N   L  L+L GC +L   P+   N+
Sbjct: 790 SLVELPASIQNFTKLNRLAIENCINLETLPSGI-NFPLLLDLDLRGCSRLRTFPDISTNI 848

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
                LN+     E++P  +++ S L  L +  C +LQ +
Sbjct: 849 Y---MLNVPRTGIEEVPWWIEKFSNLVRLCMGGCNKLQCV 885


>gi|297794603|ref|XP_002865186.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311021|gb|EFH41445.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1216

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 236/737 (32%), Positives = 352/737 (47%), Gaps = 110/737 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           + SSSSS+N +    +DVFLSFRG+DVR +F SH    L R+ I  F D+++ + + + P
Sbjct: 2   VCSSSSSLNWV----YDVFLSFRGEDVRVSFRSHFLKELDRKLITAFKDNEIKKSHSLWP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------ 114
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   IV+PVFY VDPS      
Sbjct: 58  ELVQAIKESRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IVIPVFYGVDPSHVRNQT 114

Query: 115 -DAGYC--------------------PSLGWMGIFDIPT--SESVLIEGNVNDISKKLSD 151
            D G                        +  M  F   T   E+ +IE   ND+  KL  
Sbjct: 115 GDFGRIFEETCEKNTEQVKNRWKKALSDVANMFGFHSATWDDEAKMIEEIANDVLGKLL- 173

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           L  S +    VG+E  I E+   L   S E   VGIWG  GIGKTTIA A+++ +S +F+
Sbjct: 174 LTTSKDFVNFVGIEDHIAEMSLLLQLESEEVRMVGIWGSSGIGKTTIARALFNQLSRNFQ 233

Query: 212 GSYFM---------------------------QNIRDESEKVGGLANIHLNFERRRLSRM 244
            S F+                           ++   ES ++  +   HL     RL   
Sbjct: 234 VSKFIDKAFVYKSREIYSGANPDDYNMKLHLQESFLSESLRMEDIKIDHLGVLGERLQHQ 293

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KVLI+  DL     +D L+G+   F  GSR+I+ T D   L+ H   R+ H++EV   + 
Sbjct: 294 KVLIIVDDLDGQVILDSLVGQTQWFGSGSRIIVVTNDKHFLRAH---RIDHIYEVTFPTE 350

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
                +  ++AF QN+   GF +L   V ++A  +PL L VLGSYL+G  +E W   + +
Sbjct: 351 VQGFQMLCQSAFRQNYAPEGFGKLVVDVARHAGRLPLGLNVLGSYLRGRDKEYWIDMLPR 410

Query: 365 LKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           L+      I+K+L++SYDGL   E+Q  F   AC F   +   + + L     S  I + 
Sbjct: 411 LQNGLDDKIEKILRISYDGLVSAEDQATFRHIACLFNHMEVTTIKSLLGDSDVS--IALQ 468

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-- 481
            L  KSL+ +    + MH  LQEMG +IVR + I  PGK+  L  P DI  VL E     
Sbjct: 469 NLADKSLIHVRQGYVVMHRSLQEMGRKIVRTQFIDKPGKQEFLVDPNDICYVLREGIGTK 528

Query: 482 --LPTGINLDSLKELYL-----GGCSNLKRFPEISCN-----IEDLDLKETAIEELPSSI 529
             L    N   + EL++      G  NL RF +I  +      E L L E + + LP ++
Sbjct: 529 KVLGISFNTSEIDELHIHESAFTGMRNL-RFLDIDSSKNFRKKERLHLPE-SFDYLPPTL 586

Query: 530 GNL----------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             L                  LV L +   S L  +   + +   L+ +++ G   L+++
Sbjct: 587 KLLCWSKYPMSGMPSNFRPDNLVKLRMRK-SKLHKLWEGVVSFTCLKEMDMLGSKYLKEI 645

Query: 574 PE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSS 628
           P+     NLE+L + N   +   ++ SS++ L+KL  L +  CK L  LP    L     
Sbjct: 646 PDLSMATNLETLCFRNC--ESLVELSSSIRNLNKLLRLDMGMCKTLTILPTGFNLKSLDH 703

Query: 629 IHARHCTSLKTLSNSST 645
           ++   C+ L+T    ST
Sbjct: 704 LNLGSCSELRTFPELST 720



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 2/121 (1%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPTGINL SL +L   GC  L+ FPEIS NI  L+L+ETAIEE+P  I   S L  L +
Sbjct: 813 TLPTGINLLSLDDLDFNGCQQLRSFPEISTNILRLELEETAIEEVPWWIEKFSNLTRLIM 872

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK--LPEEIGNLESLEYLNLAEKDFEKIPS 598
            +CS LK VS  +  LK L  ++ S C  L +  L      +E +E  N++E+    +P 
Sbjct: 873 GDCSRLKCVSLNISKLKHLGEVSFSNCAALTRVDLSGYPSLMEMMEVDNISEEASSSLPD 932

Query: 599 S 599
           S
Sbjct: 933 S 933



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 82/153 (53%), Gaps = 11/153 (7%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           T LPTG NL SL  L LG CS L+ FPE+S N+ DL L  T IEE PS++ +L  LV L 
Sbjct: 690 TILPTGFNLKSLDHLNLGSCSELRTFPELSTNVSDLYLFGTNIEEFPSNL-HLKNLVSLT 748

Query: 540 LT-------NCSGLKSVSSRLCNLK-SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
           ++          G+K  +  +  L  +L  L L     L +LP    NL  L+ L +   
Sbjct: 749 ISKKNNDGKQWEGVKPFTPFMAMLSPTLTHLWLDSIPSLVELPSSFQNLNQLKKLTIRNC 808

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           ++ + +P+ +  LS L DL    C++L+S PE+
Sbjct: 809 RNLKTLPTGINLLS-LDDLDFNGCQQLRSFPEI 840


>gi|357499833|ref|XP_003620205.1| Disease resistance protein [Medicago truncatula]
 gi|355495220|gb|AES76423.1| Disease resistance protein [Medicago truncatula]
          Length = 1318

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 245/747 (32%), Positives = 367/747 (49%), Gaps = 137/747 (18%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+D+FLSFRG+D RH F  +L  AL    I TF+DD+ L +G EI+PSL  AIE S ++I
Sbjct: 9   KYDLFLSFRGEDTRHGFTGNLWKALSDRGIHTFMDDEELQKGEEITPSLIKAIEDSNMAI 68

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSL------ 122
           ++ S+ YASS +CL EL  IL S    G+ V PVFY V+PSD       Y  ++      
Sbjct: 69  IVLSKNYASSTFCLKELSTILYSIKDKGRCVWPVFYDVEPSDVRKLKRSYGEAMVEHEAR 128

Query: 123 ---------GWMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSD--NKD 159
                     W    +   +            E V I   V  +S+   ++ P+     D
Sbjct: 129 DHSNMDLLQKWKNALNQVANLSGFHFKNGDEYEHVFIGKIVEQVSR---EIIPATLPVPD 185

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
            LVG+E   + + S L  G  +    VGI GIGGIGKTT+A A+Y++I   F+GS F++ 
Sbjct: 186 YLVGLEYQKQHVTSLLNDGPNDKVQMVGIHGIGGIGKTTLALAVYNSIVHQFQGSCFLEK 245

Query: 219 IRDESEKVG-------------GLANIHLNFER-------RRLSRMKVLIVFYDLTDLKQ 258
           +R+ S+K G             G  NI L   R       +R  + KVL++  D+   +Q
Sbjct: 246 VRENSDKNGLIHLQKILLSQVVGEKNIELTSVRQGISILQKRFHQKKVLLLLDDVDKEEQ 305

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV--------FEVKEL-------- 302
           ++ + GR D F  GSRVIITTRD +LL  H   R   V        FE+  L        
Sbjct: 306 LEAIAGRSDWFGRGSRVIITTRDKRLLTYHGVERTYEVNGLNDQDAFELVILKAFKNKFS 365

Query: 303 -SYNDSL-----TLFSRN------AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL 350
            SY D+L     +L   N      AF  +   +G++ +    I YA+G+PLAL+V+GS+ 
Sbjct: 366 PSYKDALFAQYGSLLDVNKLPRLKAFKTDEVFSGYVHVILRAISYASGLPLALEVIGSHF 425

Query: 351 KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF 410
              + E+ + A+++ +R+P   IQ +L++S+D L +EE+++FLD AC FKG     V   
Sbjct: 426 FNKTIEQCKYALDRYERIPDKKIQTILQLSFDALQEEEKSVFLDIACCFKGYKWTRVEQI 485

Query: 411 LDACRFS-AKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
           L+A   +  K  I  LV KSL+  S +  +T+HDL+++MG EIVRQES +DPGKRSRLW 
Sbjct: 486 LNAHYDNIMKDHIDVLVEKSLIKTSMSGNVTLHDLIEDMGKEIVRQESPEDPGKRSRLWS 545

Query: 469 PEDIYQVLNENTS-------LPTG-INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET 520
            +DI QVL ENT         P+  I ++  +E +       K+      N+  L + + 
Sbjct: 546 SKDIIQVLEENTGTSKIEIICPSSRIEVEWDEEAF-------KKME----NLRTLIIMDG 594

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKS-----------------------VSSRLCNLK 557
              E P ++ N  R+++  L    GL S                          +    K
Sbjct: 595 QFTESPKNLPNSLRILEHHLYPSWGLPSQFYPRKLAICKIPSYSTSFAWDDFFKKASKFK 654

Query: 558 SLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           ++R L+      L ++P+  G  NLE L + +    +   +  S+  L  L  LR   C 
Sbjct: 655 NIRVLSFDHHKSLTRIPDISGLVNLEELSFQDCV--NLITVDDSVGFLGNLKTLRAMRCI 712

Query: 616 RLQSLPELPCGS--SIHARHCTSLKTL 640
           +L+S+P L   S   +    C+ L++ 
Sbjct: 713 KLRSIPPLKLASLEELDLSQCSCLESF 739



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 26/191 (13%)

Query: 480  TSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLV 536
            TS+P+ + L SL+   L  C +L+RFP+I     NI ++ L  T I+ELP    NL+   
Sbjct: 856  TSIPS-LRLTSLERFNLSHCLSLERFPKILGEMNNITEIHLDNTLIQELPFPFQNLTPPQ 914

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSG---------------CLKLEKLPEEIGN-- 579
             L   NC G+  +S+R   +  L    +                 CL+  K  +E  +  
Sbjct: 915  TLYQCNC-GVVYLSNRAAVMSKLAEFTIQAEEKVSPMQSSHVEYICLRNCKFSDEYLSTG 973

Query: 580  ---LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL-PCGSSIHARHCT 635
                 +++ L+L++  F+ +P S+++   L  L L NC+ LQ +  + PC  ++ A +C 
Sbjct: 974  LMLFTNVKELHLSDNQFKILPKSIEKCHFLQRLVLDNCEELQEIEGIPPCLKTLSALNCK 1033

Query: 636  SLKTLSNSSTL 646
            SL +   S  L
Sbjct: 1034 SLTSPCKSKLL 1044



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 7/139 (5%)

Query: 481 SLPTGIN--LDSLKELYLGGCSNLKRFPEISCN-IEDLDLKET-AIEELPSSI-GNLSRL 535
           S P  ++  L  LK L +  C NL+  P +  + +E LDL    ++E  P+ + G L +L
Sbjct: 785 SFPLVVDGFLGKLKILLVKYCRNLRSIPPLRLDSLEKLDLSHCYSLESFPTVVDGLLDKL 844

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
             L + +C  L S+ S    L SL R NLS CL LE+ P+ +G + ++  ++L     ++
Sbjct: 845 KFLSMEHCVKLTSIPS--LRLTSLERFNLSHCLSLERFPKILGEMNNITEIHLDNTLIQE 902

Query: 596 IPSSMKQLSKLSDLRLQNC 614
           +P   + L+    L   NC
Sbjct: 903 LPFPFQNLTPPQTLYQCNC 921



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 391  IFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG 449
             FLD  C FKG +   V N L     ++ K  I   + +SL+        +HDL+++M  
Sbjct: 1232 FFLDIVCCFKGYESIKVQNTLCTHHSYNVKDQIKVPIDESLI--------IHDLIEKMAK 1283

Query: 450  EIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
            E+V +ES  + GK  RLW  ED   VL EN
Sbjct: 1284 ELVHRESPMESGKCGRLWLLEDTIYVLMEN 1313



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 17/169 (10%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAI------EELPSSIGNLSR 534
           S+P  + L SL+EL L  CS L+ FP +   + D  LK   +        +P+    L+ 
Sbjct: 716 SIPP-LKLASLEELDLSQCSCLESFPPVVDGLVD-KLKTMTVRSCVKLRSIPTL--KLTS 771

Query: 535 LVDLDLTNCSGLKSVSSRLCN-LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
           L +LDL+NC  L+S    +   L  L+ L +  C  L  +P     L+SLE L+L+    
Sbjct: 772 LEELDLSNCFSLESFPLVVDGFLGKLKILLVKYCRNLRSIPP--LRLDSLEKLDLSHCYS 829

Query: 593 FEKIPSSMKQ-LSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLK 638
            E  P+ +   L KL  L +++C +L S+P L   S    +  HC SL+
Sbjct: 830 LESFPTVVDGLLDKLKFLSMEHCVKLTSIPSLRLTSLERFNLSHCLSLE 878


>gi|124360568|gb|ABD33387.2| TIR [Medicago truncatula]
          Length = 1208

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 203/565 (35%), Positives = 305/565 (53%), Gaps = 66/565 (11%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           ES  I+  V D+ +KL+   P +   +LVG+E   +EIE    +GS +  T+G+WG+GGI
Sbjct: 298 ESDFIKDIVKDVLEKLNQRRPVEANKELVGIEKKYEEIELLTNNGSNDVRTLGLWGMGGI 357

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG-------------GLANIHLNFE--- 237
           GKT +A  +Y N  S FE   F++N+R+ES K G              L +    FE   
Sbjct: 358 GKTALAKKLYDNYCSQFEYHCFLENVREESTKCGLKVVRKKLFSTLLKLGHDAPYFENPI 417

Query: 238 -RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV 296
            ++RL R K LIV  D+  L+Q + L     G  PGSRVI+TTRD Q+     G  V   
Sbjct: 418 FKKRLERAKCLIVLDDVATLEQAENL---KIGLGPGSRVIVTTRDSQICHQFEGFVVR-- 472

Query: 297 FEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE 356
            EVK+L+ ++SL LFS NAF + H   G+ ELS   I Y  G PLAL+VLG+ L   S+E
Sbjct: 473 -EVKKLNEDESLQLFSCNAFQEKHAKEGYEELSKSAIGYCRGNPLALKVLGANLCAKSKE 531

Query: 357 EWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGN----DQY----LVM 408
            WES + K+K +P+  I  VLK+S+  LD  +++IFLD ACFF       D Y     ++
Sbjct: 532 AWESELEKIKEIPYAGIHDVLKLSFYDLDRTQRDIFLDIACFFYPTINEFDCYTQREYII 591

Query: 409 NFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLW 467
           +  +AC+F     I  L+ KSL+T    ++I MHDL+ EMG EIV+QE+ KDPGKRSRLW
Sbjct: 592 DLFNACKFYPATSIEVLLHKSLMTFGYCDRIQMHDLVVEMGREIVKQEAPKDPGKRSRLW 651

Query: 468 HPEDIYQVL--NENTSLPTGINLDSLK--ELYLGG-----------------CSNL---K 503
            PE IY+V   N+ T     I  D+ K  ++YL                   C+N+   +
Sbjct: 652 DPELIYEVFKYNKGTDAVEVILFDTSKIGDVYLSSRSFESMINLRLLHIANKCNNVHLQE 711

Query: 504 RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
               +S  +  L  +   +E LPS+     +LV+L +T+ S L+ +  R+  L +L  + 
Sbjct: 712 GLEWLSDKLSYLHWESFPLESLPSTFCP-QKLVELSMTH-SKLRKLWDRIQKLDNLTIIK 769

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           L     L ++P ++    +L+ L+LA      ++  S+    KL +L L+ C +++SL  
Sbjct: 770 LDNSEDLIEIP-DLSRAPNLKILSLAYCVSLHQLHPSIFSAPKLRELCLKGCTKIESLV- 827

Query: 623 LPCGSSIHARHCTSLKTLSNSSTLL 647
               + IH++   +L  L++ S+L+
Sbjct: 828 ----TDIHSKSLLTLD-LTDCSSLV 847



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/115 (59%), Positives = 83/115 (72%), Gaps = 1/115 (0%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           + +SSSS   +     DVF+SFRG D R  F SHLN AL +  ++TFIDD +L +G+EIS
Sbjct: 109 IGASSSSTLEVASNSFDVFISFRGDDTRRKFTSHLNEALKKSGVKTFIDDSELKKGDEIS 168

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
            +L  AIE S  SIVIFSE YASS+WCLNELVKILE K   GQIV+P+FY +DPS
Sbjct: 169 SALIKAIEESCASIVIFSEDYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPS 223



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 7/166 (4%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SL T I+  SL  L L  CS+L +F   S  +  L L+ T I E  S +   S+L  LDL
Sbjct: 825 SLVTDIHSKSLLTLDLTDCSSLVQFCVTSEEMTWLSLRGTTIHEFSSLMLRNSKLDYLDL 884

Query: 541 TNCSGLKSVSSRLCN---LKSLRRLNLSGCLKLEKLPEE--IGNLESLEYLNLAE-KDFE 594
           ++C  L  V  +L N   L+SL  LNLSGC ++  L     +    SLE+L L    + E
Sbjct: 885 SDCKKLNFVGKKLSNDRGLESLSILNLSGCTQINTLSMSFILDGARSLEFLYLRNCCNLE 944

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
            +P +++    LS L L  C  L SLP+LP     + A +CT L T
Sbjct: 945 TLPDNIQNCLMLSFLELDGCINLNSLPKLPASLEDLSAINCTYLDT 990


>gi|62319955|dbj|BAD94052.1| disease resistance - like protein [Arabidopsis thaliana]
          Length = 1007

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 229/736 (31%), Positives = 346/736 (47%), Gaps = 130/736 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 47  KHDVFPSFHGADVRRTFLSHIKESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 106

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-------- 126
           + S  YASS WCL+EL +I++ +   GQIV+ +FY V+P+D       G  G        
Sbjct: 107 LLSRKYASSSWCLDELAEIMKCREMVGQIVMTIFYEVEPTDIK--KQTGEFGKAFTKTCR 164

Query: 127 -------------IFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                        + D+ T           E+ +IE    D+SK   D          VG
Sbjct: 165 GKTKEHIERWRKALEDVATIAGYHSHKWCDEAEMIEKISTDVSKDFDDF---------VG 215

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD-- 221
           + + ++  E  L     E   +GI G  GIGKTTIA+ ++   S  F  +  M +IR+  
Sbjct: 216 MAAHMERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCMFDRFSRRFPFAAIMTDIRECY 275

Query: 222 --------------ESEKVGGLANI------HLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                         + + +  + N       HL     RL   KV +V  ++  L Q+D 
Sbjct: 276 PRLCLNERNAQLKLQEQMLSQIFNQKDTMISHLGVAPERLKDKKVFLVLDEVGHLGQLDA 335

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L      F PGSR+IITT D+ +LK H    + HV++V   S +++  +F  NAFGQ  P
Sbjct: 336 LAKETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVGYPSNDEAFQIFCMNAFGQKQP 392

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF +L+  V   A  +PL L+VLGS L+GMS+ EWE  + +L+      I  +++ SY
Sbjct: 393 CEGFCDLAWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFSY 452

Query: 382 DGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           D L DE++ +FL  AC F        + L+  FLD      K G+  L  KSL++     
Sbjct: 453 DALCDEDKYLFLYIACLFNYESTTKVKELLGKFLD-----VKQGLHVLAQKSLISFYGET 507

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENT---SLPTGINLD---S 490
           I MH LL++ G E   ++ +    ++ +L   E DI +VL+++T       GINLD   +
Sbjct: 508 IRMHTLLEQFGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTRDNRRFIGINLDLRKN 567

Query: 491 LKELYLGGCSNLKRF----------------------------PE-ISCNIEDLDLKETA 521
            KEL +     L+R                             PE +   +EDL      
Sbjct: 568 EKELKISE-KTLERMHDFQFVRINDVFTHKERQKLLHFKIIHQPERVQLALEDLIYHSPR 626

Query: 522 IEE----------LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           I            LPS+  N   LV+LD+++ S L+ +      L++L+ ++LS    L+
Sbjct: 627 IRSLKWFGYQNICLPSTF-NPEFLVELDMSS-SKLRKLWEGTKQLRNLKWMDLSDSEDLK 684

Query: 572 KLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH 630
           +LP  +    +LE L L       ++PSS+++L+ L  L L +C  L  LP     + + 
Sbjct: 685 ELP-NLSTATNLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNATKLE 743

Query: 631 A---RHCTSLKTLSNS 643
                +C+SL  L  S
Sbjct: 744 KLDLENCSSLVKLPPS 759



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 95/173 (54%), Gaps = 15/173 (8%)

Query: 476 LNENTSLPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE-TAIEELPSSIGN 531
           L E  +L T  NL+ LK   L  CS+L   P   E   +++ LDL   +++ ELPS  GN
Sbjct: 683 LKELPNLSTATNLEELK---LRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELPS-FGN 738

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--EEIGNLESLEYLNLA 589
            ++L  LDL NCS L  +   + N  +L+ L+L  C ++ +LP  E   NL  L+  N +
Sbjct: 739 ATKLEKLDLENCSSLVKLPPSI-NANNLQELSLRNCSRVVELPAIENATNLRELKLQNCS 797

Query: 590 EKDFEKIP-SSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
                ++P S +K++S+L  L L NC  L SLP+LP     I+A +C SL+ L
Sbjct: 798 --SLIELPLSWVKRMSRLRVLTLNNCNNLVSLPQLPDSLDYIYADNCKSLERL 848



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 100/195 (51%), Gaps = 15/195 (7%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETA-IEELPSSIGNLS 533
           +N  LP+  N + L EL +   S L++  E +  + +L   DL ++  ++ELP+ +   +
Sbjct: 636 QNICLPSTFNPEFLVELDMSS-SKLRKLWEGTKQLRNLKWMDLSDSEDLKELPN-LSTAT 693

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
            L +L L  CS L  + S +  L SL+ L+L  C  L +LP   GN   LE L+L     
Sbjct: 694 NLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELPS-FGNATKLEKLDLENCSS 752

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTLSNSSTLLTR 649
             K+P S+   + L +L L+NC R+  LP +   +++     ++C+SL  L  S   + R
Sbjct: 753 LVKLPPSINA-NNLQELSLRNCSRVVELPAIENATNLRELKLQNCSSLIELPLS--WVKR 809

Query: 650 SSKHWDIFNFSNCSN 664
            S+   +   +NC+N
Sbjct: 810 MSR-LRVLTLNNCNN 823


>gi|15229962|ref|NP_190026.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|186510665|ref|NP_001118772.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|7529774|emb|CAB86918.1| disease resistence-like protein [Arabidopsis thaliana]
 gi|332644378|gb|AEE77899.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332644379|gb|AEE77900.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1007

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 229/736 (31%), Positives = 346/736 (47%), Gaps = 130/736 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SF G DVR  F+SH+  +  R+ I+TFID+ + R   I P L  AI+GSKI+IV
Sbjct: 47  KHDVFPSFHGADVRRTFLSHIKESFRRKGIDTFIDNNIERSKSIGPELKEAIKGSKIAIV 106

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-------- 126
           + S  YASS WCL+EL +I++ +   GQIV+ +FY V+P+D       G  G        
Sbjct: 107 LLSRKYASSSWCLDELAEIMKCREMVGQIVMTIFYEVEPTDIK--KQTGEFGKAFTKTCR 164

Query: 127 -------------IFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                        + D+ T           E+ +IE    D+SK   D          VG
Sbjct: 165 GKTKEHIERWRKALEDVATIAGYHSHKWCDEAEMIEKISTDVSKDFDDF---------VG 215

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD-- 221
           + + ++  E  L     E   +GI G  GIGKTTIA+ ++   S  F  +  M +IR+  
Sbjct: 216 MAAHMERTEQLLRLDLDEVRMIGILGPPGIGKTTIATCMFDRFSRRFPFAAIMTDIRECY 275

Query: 222 --------------ESEKVGGLANI------HLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                         + + +  + N       HL     RL   KV +V  ++  L Q+D 
Sbjct: 276 PRLCLNERNAQLKLQEQMLSQIFNQKDTMISHLGVAPERLKDKKVFLVLDEVGHLGQLDA 335

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L      F PGSR+IITT D+ +LK H    + HV++V   S +++  +F  NAFGQ  P
Sbjct: 336 LAKETRWFGPGSRIIITTEDLGVLKAHG---INHVYKVGYPSNDEAFQIFCMNAFGQKQP 392

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF +L+  V   A  +PL L+VLGS L+GMS+ EWE  + +L+      I  +++ SY
Sbjct: 393 CEGFCDLAWEVKALAGELPLGLKVLGSALRGMSKPEWERTLPRLRTSLDGKIGNIIQFSY 452

Query: 382 DGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           D L DE++ +FL  AC F        + L+  FLD      K G+  L  KSL++     
Sbjct: 453 DALCDEDKYLFLYIACLFNYESTTKVKELLGKFLD-----VKQGLHVLAQKSLISFYGET 507

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE-DIYQVLNENT---SLPTGINLD---S 490
           I MH LL++ G E   ++ +    ++ +L   E DI +VL+++T       GINLD   +
Sbjct: 508 IRMHTLLEQFGRETSCKQFVHHGYRKHQLLVGERDICEVLDDDTRDNRRFIGINLDLRKN 567

Query: 491 LKELYLGGCSNLKRF----------------------------PE-ISCNIEDLDLKETA 521
            KEL +     L+R                             PE +   +EDL      
Sbjct: 568 EKELKISE-KTLERMHDFQFVRINDVFTHKERQKLLHFKIIHQPERVQLALEDLIYHSPR 626

Query: 522 IEE----------LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           I            LPS+  N   LV+LD+++ S L+ +      L++L+ ++LS    L+
Sbjct: 627 IRSLKWFGYQNICLPSTF-NPEFLVELDMSS-SKLRKLWEGTKQLRNLKWMDLSDSEDLK 684

Query: 572 KLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH 630
           +LP  +    +LE L L       ++PSS+++L+ L  L L +C  L  LP     + + 
Sbjct: 685 ELP-NLSTATNLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELPSFGNATKLE 743

Query: 631 A---RHCTSLKTLSNS 643
                +C+SL  L  S
Sbjct: 744 KLDLENCSSLVKLPPS 759



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 95/173 (54%), Gaps = 15/173 (8%)

Query: 476 LNENTSLPTGINLDSLKELYLGGCSNLKRFP---EISCNIEDLDLKE-TAIEELPSSIGN 531
           L E  +L T  NL+ LK   L  CS+L   P   E   +++ LDL   +++ ELPS  GN
Sbjct: 683 LKELPNLSTATNLEELK---LRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELPS-FGN 738

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--EEIGNLESLEYLNLA 589
            ++L  LDL NCS L  +   + N  +L+ L+L  C ++ +LP  E   NL  L+  N +
Sbjct: 739 ATKLEKLDLENCSSLVKLPPSI-NANNLQELSLRNCSRVVELPAIENATNLRELKLQNCS 797

Query: 590 EKDFEKIP-SSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
                ++P S +K++S+L  L L NC  L SLP+LP     I+A +C SL+ L
Sbjct: 798 --SLIELPLSWVKRMSRLRVLTLNNCNNLVSLPQLPDSLDYIYADNCKSLERL 848



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 100/195 (51%), Gaps = 15/195 (7%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETA-IEELPSSIGNLS 533
           +N  LP+  N + L EL +   S L++  E +  + +L   DL ++  ++ELP+ +   +
Sbjct: 636 QNICLPSTFNPEFLVELDMSS-SKLRKLWEGTKQLRNLKWMDLSDSEDLKELPN-LSTAT 693

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
            L +L L  CS L  + S +  L SL+ L+L  C  L +LP   GN   LE L+L     
Sbjct: 694 NLEELKLRRCSSLVELPSSIEKLTSLQILDLHSCSSLVELPS-FGNATKLEKLDLENCSS 752

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTLSNSSTLLTR 649
             K+P S+   + L +L L+NC R+  LP +   +++     ++C+SL  L  S   + R
Sbjct: 753 LVKLPPSINA-NNLQELSLRNCSRVVELPAIENATNLRELKLQNCSSLIELPLS--WVKR 809

Query: 650 SSKHWDIFNFSNCSN 664
            S+   +   +NC+N
Sbjct: 810 MSR-LRVLTLNNCNN 823


>gi|15222556|ref|NP_176571.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12325008|gb|AAG52450.1|AC010852_7 putative disease resistance protein; 28811-33581 [Arabidopsis
           thaliana]
 gi|332196041|gb|AEE34162.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1031

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 229/727 (31%), Positives = 352/727 (48%), Gaps = 95/727 (13%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL 62
           SS SS N     + +VF SF G +VR   +SH+        I  F D  + R  EI PSL
Sbjct: 8   SSISSCNY----RFNVFSSFHGPNVRKTLLSHMRKQFNFNGITMFDDQGIERSEEIVPSL 63

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------ 116
             AI+ S+ISIVI S+ YA SRWCL+ELV+IL+ K   G IV+ +FY V+PSD       
Sbjct: 64  KKAIKESRISIVILSKKYALSRWCLDELVEILKCKEVMGHIVMTIFYGVEPSDVRKQTGE 123

Query: 117 ------------------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLF 153
                              +  +L  +G      F    +E+ +IE    D+S KL+   
Sbjct: 124 FGFHFNETCAHRTDEDKQNWSKALKDVGNIAGEDFLRWDNEAKMIEKIARDVSDKLNAT- 182

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           PS + + +VG+E+ + E+ES L         VGI G  GIGKTTIA A+ S +S+ F+ +
Sbjct: 183 PSRDFNGMVGLEAHLTEMESLLDLDYDGVKMVGISGPAGIGKTTIARALQSRLSNKFQLT 242

Query: 214 YFMQNIRDES--------------EKV---GGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
            F+ N+++                 KV    G+   H      RL + +VLI+  D+  +
Sbjct: 243 CFVDNLKESFLNSLDELRLQEQFLAKVLNHDGIRICHSGVIEERLCKQRVLIILDDVNHI 302

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
            Q++ L      F  GSR+++TT + ++L+ H    +  ++ V   S   +  +  R AF
Sbjct: 303 MQLEALANETTWFGSGSRIVVTTENKEILQQHG---INDLYHVGFPSDEQAFEILCRYAF 359

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR-MPHMDIQK 375
            +   + GF +L+  V K    +PL L+VLGS L+G +EEEWE  + +L+  + H DI++
Sbjct: 360 RKTTLSHGFEKLARRVTKLCGNLPLGLRVLGSSLRGKNEEEWEEVIRRLETILDHQDIEE 419

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           VL+V Y  L + EQ++FL  A FF   D  LV           K G+  L  KSL+ ISN
Sbjct: 420 VLRVGYGSLHENEQSLFLHIAVFFNYTDGDLVKAMFTDNNLDIKHGLKILADKSLINISN 479

Query: 436 NK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLD--S 490
           N+ I +H LLQ+ G + V +E   +P K   L H  +I  VL     T   +GI+ D   
Sbjct: 480 NREIVIHKLLQQFGRQAVHKE---EPWKHKILIHAPEICDVLEYATGTKAMSGISFDISG 536

Query: 491 LKELYLGGCSNLKRFP------------------------EISCNIEDLDLKETAIEELP 526
           + E+ + G S  KR P                        E    +  L  +    + LP
Sbjct: 537 VDEVVISGKS-FKRIPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWEAYPCKSLP 595

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
            +      LV+L + + S L+ +      L  L+++NL     L++LP ++ N  +LE +
Sbjct: 596 PTF-QPQYLVELYMPS-SQLEKLWEGTQRLTHLKKMNLFASRHLKELP-DLSNATNLERM 652

Query: 587 NLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTSLKTLSN 642
           +L+  +   +IPSS   L KL  L + NC  LQ +P    L    +++ R C+ L+ +  
Sbjct: 653 DLSYCESLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHMNLASLETVNMRGCSRLRNIPV 712

Query: 643 SSTLLTR 649
            ST +T+
Sbjct: 713 MSTNITQ 719



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 34/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P  +NL SL+ + + GCS L+  P +S NI  L +  TA+E +P SI   SRL  L ++
Sbjct: 687 IPAHMNLASLETVNMRGCSRLRNIPVMSTNITQLYVSRTAVEGMPPSIRFCSRLERLSIS 746

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +   LK ++                      LP       SL+ L+L + D E IP  +K
Sbjct: 747 SSGKLKGIT---------------------HLP------ISLKQLDLIDSDIETIPECIK 779

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            L  L  L L  C+RL SLPELP     + A  C SL+T+     L T  ++     NF+
Sbjct: 780 SLHLLYILNLSGCRRLASLPELPSSLRFLMADDCESLETV--FCPLNTPKAE----LNFT 833

Query: 661 NC 662
           NC
Sbjct: 834 NC 835



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 35/231 (15%)

Query: 421 GISRLV--GKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
           G+  +V  GKS   I N +       ++ G + V      +  +R RL H E  Y     
Sbjct: 536 GVDEVVISGKSFKRIPNLRFLKVFKSRDDGNDRVHIPEETEFPRRLRLLHWE-AYPC--- 591

Query: 479 NTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD----LKETAIEELPSSIGNLSR 534
             SLP       L ELY+   S L++  E +  +  L          ++ELP  + N + 
Sbjct: 592 -KSLPPTFQPQYLVELYMPS-SQLEKLWEGTQRLTHLKKMNLFASRHLKELPD-LSNATN 648

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL------ 588
           L  +DL+ C  L  + S   +L  L  L ++ C+ L+ +P  + NL SLE +N+      
Sbjct: 649 LERMDLSYCESLVEIPSSFSHLHKLEWLEMNNCINLQVIPAHM-NLASLETVNMRGCSRL 707

Query: 589 ---------------AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                          +    E +P S++  S+L  L + +  +L+ +  LP
Sbjct: 708 RNIPVMSTNITQLYVSRTAVEGMPPSIRFCSRLERLSISSSGKLKGITHLP 758


>gi|5302806|emb|CAB46047.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268445|emb|CAB80965.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1103

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 239/697 (34%), Positives = 344/697 (49%), Gaps = 99/697 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF SF G DVR  F+SHL  AL R  I TF+D  + R   I+  L +AI  ++ISIV
Sbjct: 5   RYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADELITAIREARISIV 64

Query: 75  IFSEGYASSRWCLNELVKILES-KNK-YGQIVVPVFYLVDPS------------------ 114
           IFSE YASS WCLNELV+I +  K+K   Q+V+PVFY VDPS                  
Sbjct: 65  IFSENYASSTWCLNELVEIHKCHKDKDLDQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCE 124

Query: 115 DAGYCPSLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
           D        W+  + DI            SE+ ++    ND+S KL  L P    D LVG
Sbjct: 125 DKPEDQKQRWVKALTDISNLAGEDLRNGPSEAAMVVKIANDVSNKLFPL-PKGFGD-LVG 182

Query: 164 VESIIKEIESQLLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           +E  I+ I+ +L   S E    VGIWG  GIGK+TI  A++S +SS F    F+      
Sbjct: 183 IEDHIEAIKLKLCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTS 242

Query: 223 SEKVGG---------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
              V G         L+ I         H     +RL   KVLI+  D+ +L+ +  L+G
Sbjct: 243 GSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVG 302

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           + + F  GSR+I+ T+D QLLK H    +  ++EVK  S   +L +  + AFG+  P   
Sbjct: 303 KAEWFGSGSRIIVITQDRQLLKAHE---IDLIYEVKLPSQGLALKMICQYAFGKYSPPDD 359

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           F EL+  V K A  +PL L VLGS LK  S+EEW   + +L+   + DI K L+VSY  L
Sbjct: 360 FKELAFEVAKLAGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRL 419

Query: 385 DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDL 443
           D ++Q+IF   A  F G     + +FL     +  I +  L  KSL+ ++ N+ I MH+L
Sbjct: 420 DPKDQDIFHYIAWLFNGWKVKSIKDFL-GDGVNVNIRLKTLDDKSLIRLTPNDTIEMHNL 478

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD-------------- 489
           LQ++  EI R+ES  +PGKR  L + E+I  V  +NT     + +D              
Sbjct: 479 LQKLATEIDREESNGNPGKRRFLENAEEILDVFTDNTGTEKLLGIDFSTSSDSQIDKPFI 538

Query: 490 SLKELYLGGCSNLK-----------------RFPE----ISCNIEDLDLKETAIEELPSS 528
           S+ E    G  NL+                 R P     +   ++ L  +   ++ LPS+
Sbjct: 539 SIDENSFQGMLNLQFLNIHDHYWWQPRETRLRLPNGLVYLPRKLKWLRWENCPLKRLPSN 598

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYL 586
                 LV+L + N S L+ + +    L SL+++NL     L+++P+     NLE L+  
Sbjct: 599 F-KAEYLVELRMEN-SALEKLWNGTQPLGSLKKMNLRNSNNLKEIPDLSLATNLEELDLC 656

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           N   +  E  PS +   S L  L L  C RL++ PE+
Sbjct: 657 NC--EVLESFPSPLNSES-LKFLNLLLCPRLRNFPEI 690



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 8/140 (5%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
           +L  LK + L  C N+   P++S   N+E LDL    ++  LPS+IGNL +L  L++  C
Sbjct: 756 SLGKLKRVDLSECENMIEIPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEEC 815

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
           +GLK +   + NL SL  ++L GC  L  +P+     +S+  LNL +   E++P   +  
Sbjct: 816 TGLKVLPMDI-NLSSLHTVHLKGCSSLRFIPQIS---KSIAVLNLDDTAIEEVPC-FENF 870

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
           S+L +L ++ CK L+  P++
Sbjct: 871 SRLMELSMRGCKSLRRFPQI 890



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 28/139 (20%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  INL SL  ++L GCS+L+  P+IS +I  L+L +TAIEE+P    N SRL++L + 
Sbjct: 821 LPMDINLSSLHTVHLKGCSSLRFIPQISKSIAVLNLDDTAIEEVP-CFENFSRLMELSMR 879

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
            C             KSLRR              +I    S++ LNLA+   E++P  ++
Sbjct: 880 GC-------------KSLRRF------------PQIST--SIQELNLADTAIEQVPCFIE 912

Query: 602 QLSKLSDLRLQNCKRLQSL 620
           + S+L  L +  CK L+++
Sbjct: 913 KFSRLKVLNMSGCKMLKNI 931



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 55/86 (63%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P   N   L EL + GC +L+RFP+IS +I++L+L +TAIE++P  I   SRL  L+++
Sbjct: 864 VPCFENFSRLMELSMRGCKSLRRFPQISTSIQELNLADTAIEQVPCFIEKFSRLKVLNMS 923

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGC 567
            C  LK++S  +  L  L +++ + C
Sbjct: 924 GCKMLKNISPNIFRLTRLMKVDFTDC 949



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 44/186 (23%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI-------------------------------- 508
           S P+ +N +SLK L L  C  L+ FPEI                                
Sbjct: 663 SFPSPLNSESLKFLNLLLCPRLRNFPEIIMQSFIFTDEIEIEVADCLWNKNLPGLDYLDC 722

Query: 509 --SCN--------IEDLDLK-ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
              CN        +++L ++    +E+L   + +L +L  +DL+ C  +  +   L    
Sbjct: 723 LRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSECENMIEIPD-LSKAT 781

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           +L  L+LS C  L  LP  IGNL+ L  LN+ E    K+      LS L  + L+ C  L
Sbjct: 782 NLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDINLSSLHTVHLKGCSSL 841

Query: 618 QSLPEL 623
           + +P++
Sbjct: 842 RFIPQI 847


>gi|224121242|ref|XP_002318534.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222859207|gb|EEE96754.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1360

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 221/680 (32%), Positives = 351/680 (51%), Gaps = 90/680 (13%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVI 75
           DVFLSFRG+D R +F  HL  +L +++I  F+D   + +G+EI+P+L  AI+ S  SI+I
Sbjct: 19  DVFLSFRGEDTRDSFTKHLYDSLNKQEIRVFLDASGMIQGDEIAPTLMEAIQDSASSIII 78

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------G 117
            S  YA+S WCL EL +I E +    ++++PVFY VDPS+                   G
Sbjct: 79  LSPRYANSHWCLEELARICELR----RLILPVFYQVDPSNVRRQKGPFEQDFESHSKRFG 134

Query: 118 YCPSLGWMG-----------IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W             +FD  + E  LI   VN + ++L    P       VG++S
Sbjct: 135 DDKVVKWRAAMNKVGGISGFVFDT-SGEDHLIRRLVNRVLQELRKT-PVGIATYTVGLDS 192

Query: 167 IIKEIESQLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
            +++++ +     S     +G++G+GGIGKTT+A+A+++ +  HFE   F+ NI+D S++
Sbjct: 193 RLEKLKMRFTDDKSNRVQVLGLYGMGGIGKTTLATALFNKLVGHFESRCFISNIKDISQE 252

Query: 226 VGGLANIH------LNFERRRLSRMK-VLIVFYDLTDLK-------------QIDLLIGR 265
            GGL  +       L  +R  ++ +   + V  +L   K             Q+++L G+
Sbjct: 253 DGGLVTLQNKLLGDLFPDRPPVNDINDGIAVIKELCHEKRVLVVLDDVDDVNQLNVLAGK 312

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            D F  GSRVI+TTR+  +L  H    V   +EV+EL  +++L LFS +A  +++P   +
Sbjct: 313 RDWFGEGSRVIVTTRNRDVLVEH---LVNEFYEVRELGSSEALKLFSYHALRRDNPTEEY 369

Query: 326 LELSNIVIKYANGVPLALQVLGSYL---KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
           L +S  ++    G+PLAL+V GS L   +G+  ++WE  + KL+ +   ++Q VL++S+D
Sbjct: 370 LNISKEIVSLTGGLPLALEVFGSTLFNERGI--KKWEDVLKKLREIRPGNLQDVLRISFD 427

Query: 383 GLDDEEQNIFLDTACFF--KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KIT 439
           GLDDEE+ +FLD AC F      +   ++ L+ C F A+  I+ L  K L+ I  + ++ 
Sbjct: 428 GLDDEEKCVFLDIACLFIKMRMKREEAIDILNGCGFRAETAITVLTVKCLIKIGGDYELW 487

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKELY-- 495
           MHD L++MG +IVR E++ DPG RSRLW   DI  +L   + T    G+ LD  K+ Y  
Sbjct: 488 MHDQLRDMGRQIVRDENLLDPGMRSRLWDRGDIMTMLKHKKGTRHVQGLILDFEKKNYVR 547

Query: 496 ---------LGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLDLTNCSG 545
                    L   S+L    E  C    L L+  A E EL      L  LV+L L   + 
Sbjct: 548 TQKISWVKALNPSSSLDYLIE-KCK---LFLQLRAEEGELILDTEALKSLVNLRLLQINH 603

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI--PSSMKQL 603
            K          SL+ L    C  L+KLP +    E L  L+L+E   +++   +  K  
Sbjct: 604 AKVKGKFKSFPASLKWLQWKNC-PLKKLPSDYAPHE-LAVLDLSESGIQRVWGWTRNKVA 661

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
             L  + L+ C  L++ P+L
Sbjct: 662 ENLMVMNLRRCYNLEASPDL 681



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 81/137 (59%), Gaps = 3/137 (2%)

Query: 489 DSLKELYLGGCSNLKRFPEIS-CN-IEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSG 545
           ++L  + L  C NL+  P++S C  +E LD K    + ++  S+GN+  L+ L+L  C  
Sbjct: 662 ENLMVMNLRRCYNLEASPDLSGCKKLEKLDFKGCIQLTKIHESLGNVRTLLQLNLDKCIN 721

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L      +  L+ L+ L LS CLKLE+LP++IG++ SL+ L + E     +P S+ +L+K
Sbjct: 722 LVEFPRDVSGLRLLQNLILSSCLKLEELPQDIGSMNSLKELVVDETAISMLPQSLYRLTK 781

Query: 606 LSDLRLQNCKRLQSLPE 622
           L  L L +CK ++ LPE
Sbjct: 782 LEKLSLNDCKFIKRLPE 798



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 48/252 (19%)

Query: 401 GNDQYLVMNFLDAC----RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQES 456
           GN + L+   LD C     F   +   RL+   +++   + + + +L Q++G     +E 
Sbjct: 706 GNVRTLLQLNLDKCINLVEFPRDVSGLRLLQNLILS---SCLKLEELPQDIGSMNSLKEL 762

Query: 457 IKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNI---E 513
           + D    S L  P+ +Y+             L  L++L L  C  +KR PE   N+   +
Sbjct: 763 VVDETAISML--PQSLYR-------------LTKLEKLSLNDCKFIKRLPERLGNLISLK 807

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS-------- 565
           +L L  +A+EELP SIG+LS L  L L  C  L ++   + NL+SL  ++++        
Sbjct: 808 ELSLNHSAVEELPDSIGSLSNLEKLSLMRCQSLTTIPESIRNLQSLMEVSITSSAIKELP 867

Query: 566 ---------------GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
                          GC  L KLP+ IG L S+  L L      ++P  ++ L  +  L 
Sbjct: 868 AAIGSLPYLKTLFAGGCHFLSKLPDSIGGLASISELELDGTSISELPEQIRGLKMIEKLY 927

Query: 611 LQNCKRLQSLPE 622
           L+ C  L+ LPE
Sbjct: 928 LRKCTSLRELPE 939



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 27/167 (16%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP  I +L +L++L L  C +L   PE   N++ L    +  +AI+ELP++IG+L  L  
Sbjct: 819 LPDSIGSLSNLEKLSLMRCQSLTTIPESIRNLQSLMEVSITSSAIKELPAAIGSLPYLKT 878

Query: 538 LDLTNC----------SGLKSVSS-------------RLCNLKSLRRLNLSGCLKLEKLP 574
           L    C           GL S+S              ++  LK + +L L  C  L +LP
Sbjct: 879 LFAGGCHFLSKLPDSIGGLASISELELDGTSISELPEQIRGLKMIEKLYLRKCTSLRELP 938

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           E IGN+ +L  +NL   +  ++P S  +L  L  L L  CKRL  LP
Sbjct: 939 EAIGNILNLTTINLFGCNITELPESFGRLENLVMLNLDECKRLHKLP 985



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 103/243 (42%), Gaps = 65/243 (26%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRL 535
            + LP  I  L  +++LYL  C++L+  PE   NI +L   +L    I ELP S G L  L
Sbjct: 911  SELPEQIRGLKMIEKLYLRKCTSLRELPEAIGNILNLTTINLFGCNITELPESFGRLENL 970

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRL---------------NLSGCLKLE--------- 571
            V L+L  C  L  +   + NLKSL  L               NLS  + L+         
Sbjct: 971  VMLNLDECKRLHKLPVSIGNLKSLCHLLMEKTAVTVLPENFGNLSSLMILKMQKDPLEYL 1030

Query: 572  -------------------------------KLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
                                           KLP++   L SL+ L+L   +F  +PSS+
Sbjct: 1031 RTQEQLVVLPNSFSKLSLLEELNARAWRISGKLPDDFEKLSSLDILDLGHNNFSSLPSSL 1090

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
              LS L  L L +C+ L+SLP LP     +   +C  L+T+S+ S L     +   + N 
Sbjct: 1091 CGLSLLRKLLLPHCEELKSLPPLPPSLEELDVSNCFGLETISDVSGL-----ERLTLLNI 1145

Query: 660  SNC 662
            +NC
Sbjct: 1146 TNC 1148



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 499  CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
            C  LK  P +  ++E+LD+      E  S +  L RL  L++TNC  +  +    C LK 
Sbjct: 1104 CEELKSLPPLPPSLEELDVSNCFGLETISDVSGLERLTLLNITNCEKVVDIPGIGC-LKF 1162

Query: 559  LRRLNLSGC 567
            L+RL +S C
Sbjct: 1163 LKRLYMSSC 1171


>gi|15242954|ref|NP_200620.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759538|dbj|BAB11004.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332009616|gb|AED96999.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 225/691 (32%), Positives = 344/691 (49%), Gaps = 98/691 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF +F G DVR  F+SHL        I  F D  + R   I P+L+ AI+ S+ISIV
Sbjct: 14  RYRVFTNFHGPDVRKTFLSHLRKQFSYNGISMFNDQSIERSQTIVPALTGAIKESRISIV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGI------- 127
           + S+ YASSRWCL+EL++IL+ +   GQIV+ VFY VDPSD       G  GI       
Sbjct: 74  VLSKNYASSRWCLDELLEILKCREDIGQIVMTVFYGVDPSDVR--KQTGEFGIAFNKTCE 131

Query: 128 ------------------------FDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                                   F    +E+ +IE    D+S KL+     D +D +VG
Sbjct: 132 GKTNEETQKWSKALNDVGNIAGEHFFNWDNEAKMIEKIARDVSNKLNATISWDFED-MVG 190

Query: 164 VESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR-- 220
           +E+ +++++S L L        VGI+G  GIGKTTIA A++S +SS F+ + FM+NIR  
Sbjct: 191 IEAHLQKMQSLLHLDYEDGAMIVGIYGPAGIGKTTIARALHSRLSSSFQLTCFMENIRGS 250

Query: 221 -----DE-------SEKV-------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                DE        E++        G+   HL     RL   KVLI+  D+ DL+Q++ 
Sbjct: 251 YNSGLDEYGLKLRLQEQLLSKVLNHDGIRINHLGAIPERLCDQKVLIILDDVDDLQQLEA 310

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV-FEVKELSYNDSLTLFSRNAFGQNH 320
           L    + F PGSR+I+TT D +LL+ H  ++  HV F  +E    ++  +F   AF ++ 
Sbjct: 311 LANETNWFGPGSRIIVTTEDQELLEQHDVNKKYHVDFPTRE----EACKIFCTYAFRRSF 366

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
              GF +L+  V    + +PL L+V+GS L+G  E++WE  + +L+      I  VL+V 
Sbjct: 367 APYGFEKLAERVTWLCSNLPLGLRVMGSTLRGKKEDDWEGILRRLENSLDRKIDGVLRVG 426

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKIT 439
           YD L +++Q ++L  A FF   D   V   L       K+G+  L  KSL+ IS    I 
Sbjct: 427 YDHLCEDDQFLYLLIAFFFNYVDDDHVKAMLVEDNLDVKLGLKTLAYKSLIQISAEGNIV 486

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLDS--LKELY 495
           MH LLQ +G E ++++   +P KR  L    +I  VL   + TS  +GI+ D+  + E+ 
Sbjct: 487 MHKLLQRVGREAIQRQ---EPTKRRILIDAREICDVLRYGKGTSNVSGISFDTSDMSEVT 543

Query: 496 LGGCSNLKRFP------------------------EISCNIEDLDLKETAIEELPSSIGN 531
           +      KR                          E  C +  L  +    + LP +  N
Sbjct: 544 ISD-DAFKRLHDLRFLKVTKSRYDGKYRMHIPAGIEFPCLLRLLHWEAYPSKCLPPTF-N 601

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
              LV+L++   S L+ + S   +L++L+ ++L     L++LP ++ N  +LE LNL   
Sbjct: 602 PEFLVELNMQG-SQLEHLWSGTQSLRNLKNMDLGWSPNLKELP-DLTNATNLEDLNLNSC 659

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +   +IPSS   L KL +L +  C  LQ +P
Sbjct: 660 ESLVEIPSSFSHLHKLKNLWMSYCINLQVIP 690



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 55/223 (24%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
           +L +LK + LG   NLK  P+++   N+EDL+L    ++ E+PSS  +L +L +L ++ C
Sbjct: 624 SLRNLKNMDLGWSPNLKELPDLTNATNLEDLNLNSCESLVEIPSSFSHLHKLKNLWMSYC 683

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP---EEIGNLE------------------S 582
             L+ + + + NL SL R+ ++GC +  K+P     I  L+                   
Sbjct: 684 INLQVIPAHM-NLVSLERVTMTGCSRFRKIPVISTHINYLDIAHNTEFEVVHASIALWCR 742

Query: 583 LEYLNLAEK---------------------DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L YLN++                       D E+IP  +K L +L  L L  C+RL SLP
Sbjct: 743 LHYLNMSYNENFMGLTHLPMSLTQLILRYSDIERIPDCIKALHQLFSLDLTGCRRLASLP 802

Query: 622 ELPCGS--SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           ELP GS   + A  C SL+T+   S L T  +    + NF+NC
Sbjct: 803 ELP-GSLLDLEAEDCESLETV--FSPLHTPRA----LLNFTNC 838


>gi|13517472|gb|AAK28808.1|AF310961_1 resistance-like protein P3-A [Linum usitatissimum]
          Length = 1110

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 175/506 (34%), Positives = 274/506 (54%), Gaps = 50/506 (9%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVFL FRG D R  F SHL +AL  +KI  FID+KL +   I   L S ++   +S+V
Sbjct: 22  EYDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESID-ELISILQRCPLSVV 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----AGYCPSLGWMGIFDI 130
           +FSE +A S WCL E+V I E   K G  V+PVFY VDPSD    +       WM     
Sbjct: 81  VFSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKSHRTGPKRWMDALKA 140

Query: 131 PTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSG 178
                         ES LI+  V  + K+L D+ PS N++ LV + S I E+E  L +  
Sbjct: 141 VAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMGSRIFEVERLLAMDK 200

Query: 179 STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG--SYFMQNIRDESEKVGGLANI---- 232
             +   +G+W +GG+GKTT+A A Y  ++S  +G    F++N+ +  EK  G+  I    
Sbjct: 201 LDDTCIIGLWEMGGVGKTTLAEACYDRVTSSNKGIKHLFVRNVNEICEKHHGVEKIVHKL 260

Query: 233 ---------------HLNFERRRLSRMKVLIVFYDLTDLKQIDL--LIGRLDGFVPGSRV 275
                          ++ + R RLSR +V +V  ++  L+Q+ L  +      F  GSR+
Sbjct: 261 YSKLLDENNIDREDLNIGYRRERLSRSRVFVVLDNVETLEQLALGYVFNLSKVFAAGSRI 320

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           IITTR+ ++L+N     +  ++ V+ L+  +S  LFS +AF Q+ P   ++  S +   Y
Sbjct: 321 IITTRNKKVLQN----AMAKIYNVECLNDEESTRLFSLHAFKQDRPQDNWMGKSRLATSY 376

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
             G PLAL++LG  L G     W S +  L++  ++ I+ +L+ SYD L  EE+ IF+D 
Sbjct: 377 CKGNPLALKILGGALYGEDIHYWRSFLTGLRQPGNLGIENILRRSYDKLGKEEKKIFMDV 436

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI----SNNKITMHDLLQEMGGEI 451
           AC   G  +  +++++     S+ + +  L+ KSL+T     + +KI +HDLL+EM   I
Sbjct: 437 ACLLYGMSRSRLIDYMATMYSSSYVRVKDLIDKSLLTCVSSKNEDKIEVHDLLKEMAWNI 496

Query: 452 VRQESIKDPGKRSRLWHPEDIYQVLN 477
           V++E     GKRSRL  P+D++++L+
Sbjct: 497 VKEEP--KLGKRSRLVDPDDVHKLLS 520



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 7/149 (4%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCS 544
            + +L  L++  C +L   P    N+  L    L ET I+ LPSSI  L +L  +DL +C 
Sbjct: 889  MSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCK 948

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+S+ + +  L  L  L++SGC  +  LPE   NL++L       K  + +PS+  +L 
Sbjct: 949  SLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKTLNVSGC--KSLQALPSNTCKLL 1006

Query: 605  KLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
             L+ +    C +L Q++P E      +HA
Sbjct: 1007 YLNTIHFDGCPQLDQAIPGEFVANFLVHA 1035



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 52/186 (27%)

Query: 488 LDSLKELYLGGCSNLKRFP----------------EISC-------NIEDLDLKETAIEE 524
           L  L  L +  C NLKR P                E++C        +E+ DL  T++ E
Sbjct: 722 LTKLVTLDINYCKNLKRLPPKLDSKLLKHVRMKNLEVTCCPEIDSRELEEFDLSGTSLGE 781

Query: 525 LPSSIGNLS-----RLVDLDLTNCSGLKSVSSRL------------------------CN 555
           LPS+I N+      RL   ++T   G+ ++  R                           
Sbjct: 782 LPSAIYNVKQNGVLRLHGKNITKFPGITTILKRFKLSGTSIREIDLADYHQQHQTSDGLL 841

Query: 556 LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           L     L+L+G  +LE LP  I N+ S E    +    E +P   + +S L+ L +  C+
Sbjct: 842 LPKFHNLSLTGNRQLEVLPNSIWNMISEELFICSSPLIESLPEISEPMSTLTSLHVFCCR 901

Query: 616 RLQSLP 621
            L S+P
Sbjct: 902 SLTSIP 907


>gi|14532598|gb|AAK64027.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|25054971|gb|AAN71957.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 703

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 194/555 (34%), Positives = 302/555 (54%), Gaps = 72/555 (12%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG DVR NF+SH+     R+ I  FID+++ RG  I P L  AI  SKI+IV+
Sbjct: 80  HHVFPSFRGDDVRRNFLSHIQKEFRRKGITPFIDNEIRRGESIGPELIKAIRESKIAIVL 139

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS-------------- 121
            S  YASS+WCL ELV+I++ K ++G  V  +FY VDPS                     
Sbjct: 140 LSRNYASSKWCLEELVEIMKCKKEFGLTVFAIFYEVDPSHVKKLTGEFGAVFQKTCKGRT 199

Query: 122 ----LGWMGIFD-IPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W   F+ + T          +E+ +IE    +ISK+L +  P    + L+G+++
Sbjct: 200 KENIMRWRQAFEEVATIAGYDSRNWENEAAMIEEIAIEISKRLINSSPFSGFEGLIGMKA 259

Query: 167 IIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
            I++++  L L  + E  TVGI G  GIGK+TIA  +++ IS  F+ S FM+     +  
Sbjct: 260 HIEKMKQLLCLDSTDERRTVGISGPSGIGKSTIARVLHNQISDGFQMSVFMKFKPSYTRP 319

Query: 226 V-GGLANIHLNFERRRLSRM---------------------KVLIVFYDLTDLKQIDLLI 263
           +     ++ L  E++ L+++                     KVLIV   +  L Q+ L +
Sbjct: 320 ICSDDHDVKLQLEQQFLAQLINQEDIKIHQLGTAQNFVMGKKVLIVLDGVDQLVQL-LAM 378

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
            +     PGSR+IITT+D QLLK     ++ H++ V     +++L +F  +AFG + P  
Sbjct: 379 PKAVCLGPGSRIIITTQDQQLLK---AFQIKHIYNVDFPPDHEALQIFCIHAFGHDSPDD 435

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF +L+  V + A  +PL L+V+GS+ +GMS+E+W+  + +L+     +I  +LK SYD 
Sbjct: 436 GFEKLATKVTRLAGNLPLGLRVMGSHFRGMSKEDWKGELPRLRIRLDGEIGSILKFSYDV 495

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACR--FS-AKIGISRLVGKSLVTISNNKITM 440
           LDDE++++FL  ACFF  ND+ +   F D  R  FS  + G+  LV +SL++    +  M
Sbjct: 496 LDDEDKDLFLHIACFF--NDEGIDHTFEDTLRHKFSNVQRGLQVLVQRSLISEDLTQ-PM 552

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD---SLKELY 495
           H+LL ++G EIVR +S+ +PGKR  L   ++I +VL  +T   +  GIN +   S+ EL 
Sbjct: 553 HNLLVQLGREIVRNQSVYEPGKRQFLVDGKEICEVLTSHTGSESVIGINFEVYWSMDELN 612

Query: 496 LG-----GCSNLKRF 505
           +      G SNL+ F
Sbjct: 613 ISDRVFEGMSNLQFF 627


>gi|227438253|gb|ACP30616.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1791

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 216/689 (31%), Positives = 343/689 (49%), Gaps = 89/689 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F+SHL        I  F D  + R + I+P+L+ AI  S+ISIV
Sbjct: 13  RYRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAGYC-------- 119
           + ++ YASS WCL+EL++IL+ K + GQIV+ +FY VDPS       D G          
Sbjct: 73  VLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGK 132

Query: 120 ---PSLGW-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+             ES +IE    D+S KL+     D +D +VG+E
Sbjct: 133 TEEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFED-MVGIE 191

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           + + +++S L S       VGI G  GIGKTTIA A++S +SS F+ + FM+N+R     
Sbjct: 192 AHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNS 251

Query: 226 VG----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
            G                      G+   HL     RL  +KVLI+  D+ DL+Q++ L 
Sbjct: 252 GGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALA 311

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
              + F  GSR+I+TT D +LL+ H  + + HV    E    ++  +F R AF Q+ P  
Sbjct: 312 DETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTE---KEARKIFCRYAFRQSLPPY 368

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           G+  L+    +    +P  L+V+GS L+G  E++WES + +L+      I+ VL+V YD 
Sbjct: 369 GYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDS 428

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHD 442
           L +++Q +F   A FF   +   V   L       ++G+  L  KSL+ IS+  ++ MH 
Sbjct: 429 LHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHK 488

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD----------- 489
           LLQ++G + ++++   +P KR  L   +DI  VL  ++   +  GI+ D           
Sbjct: 489 LLQQVGRQAIQRQ---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDIS 545

Query: 490 -----SLKELYLGGCSNLKRFPEISCNI-EDLD----LKETAIEELPSSIGNLS----RL 535
                S++ L      N +    +  ++ ED++    LK    E  P      +     L
Sbjct: 546 ARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHL 605

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
           V+L LT+ + L+ +      L SL+++ L  CL L++LP ++ N  +LE L++   +   
Sbjct: 606 VELHLTD-TQLEQLWEGTQPLTSLKKMVLVSCLCLKELP-DLANATNLEILDVCGCQSLV 663

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +I SS+  L +L  L +  CK+LQ +P L
Sbjct: 664 EIHSSVGNLHRLQSLDMIFCKKLQVVPTL 692



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 252/567 (44%), Gaps = 113/567 (19%)

Query: 134  ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLL---SGSTEFNTVGIWGI 190
            ES +IE    D+S KL+    +D +D +VG+E+ +++++S L     G   F  VGI G 
Sbjct: 1024 ESEMIEKIARDVSNKLNSTVSTDFED-MVGIEAHLEKMQSLLHLDDEGGAMF--VGICGP 1080

Query: 191  GGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG----------------------G 228
             GIGKTTIA A++S +SS F+ S FM+N+R      G                      G
Sbjct: 1081 AGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNG 1140

Query: 229  LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
            +   HL     RL   KVLI+  D+ DLKQ++ L      F  GSRVI+           
Sbjct: 1141 MRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGSRVIL----------- 1189

Query: 289  RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
                   + E+      D+  +F R AF Q     GF +L   V+   + +PL L+V+GS
Sbjct: 1190 -------MLEL------DARQIFCRIAFRQLSAPHGFEKLVERVVNLCSNLPLGLRVMGS 1236

Query: 349  YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVM 408
             L+    ++WE+ + +L+   + DI+ VL+V YD L  ++Q +F   ACFF   D   V 
Sbjct: 1237 SLRRKKVDDWEAILQRLENSLNRDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQDDDRVK 1296

Query: 409  NFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLW 467
              L       ++G+  L  KSL+ IS    I MH LLQ++G E V    +++P KR  L 
Sbjct: 1297 AMLVDSNLDVRLGLKTLSYKSLIQISAEGTIVMHKLLQQVGREAVH---LQEPRKRQILI 1353

Query: 468  HPEDIYQVLN-------------ENTSLPTGINLDSLK---------------------- 492
                I  VL              + +++P G+ + +                        
Sbjct: 1354 DAHQICDVLENDYDSASVMGISFDTSTIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVR 1413

Query: 493  ------------------ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR 534
                              E+Y G C      PE   ++ +L    + +E+L   I  L+ 
Sbjct: 1414 MHLPEDMSFPPLLRLLHWEVYPGKCLPHTLRPE---HLVELCFVNSKLEQLWQGIQPLTN 1470

Query: 535  LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
            L  +DL+    LK V   L N   L+RLNL+GC  L ++P  IG+L  LE L +      
Sbjct: 1471 LKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISL 1529

Query: 595  KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            ++  S   L+ L  L +  C +L+ +P
Sbjct: 1530 QVFPSHLNLASLETLEMVGCWQLRKIP 1556



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 47/199 (23%)

Query: 488 LDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK++ L  C  LK  P++  + N+E LD+    ++ E+ SS+GNL RL  LD+  C 
Sbjct: 625 LTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCK 684

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----------------EEI-------GNLE 581
            L+ V + L NL SL  L + G  ++ +LP                EE         +L+
Sbjct: 685 KLQVVPT-LFNLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQ 743

Query: 582 SLEYLNLA-------------------EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            LE    A                       E+IP  +K L  L +L +  C +L SLPE
Sbjct: 744 CLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLPE 803

Query: 623 LPCG-SSIHARHCTSLKTL 640
           LP   +++    C SL+TL
Sbjct: 804 LPRSLTTLTVYKCPSLETL 822



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 14/149 (9%)

Query: 460  PGK-RSRLWHPEDIYQVLNENTSLPT---GIN-LDSLKELYLGGCSNLKRFPEIS--CNI 512
            PGK       PE + ++   N+ L     GI  L +LK++ L G  +LK  P++S   ++
Sbjct: 1435 PGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHL 1494

Query: 513  EDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
            + L+L    ++ E+PSSIG+L +L +L++  C  L+   S L NL SL  L + GC +L 
Sbjct: 1495 KRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLR 1553

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            K+P       S + L + +   E+ P S+
Sbjct: 1554 KIP-----YVSTKSLVIGDTMLEEFPESL 1577


>gi|297826151|ref|XP_002880958.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297326797|gb|EFH57217.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 986

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 216/705 (30%), Positives = 344/705 (48%), Gaps = 94/705 (13%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLS 63
           +SSS++ I   ++ VF SF G DVR  F+SHL+     + I TF D+K++RG  I P L 
Sbjct: 2   ASSSLSCIK--RYHVFSSFHGPDVRRGFLSHLHNLFASKGITTFNDEKIDRGQPIGPELV 59

Query: 64  SAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------- 116
            AI  S++SIV+ S+ YASS WCL+EL++IL+ K   GQI++ +FY V+PS         
Sbjct: 60  QAIRESRVSIVLLSKKYASSSWCLDELLEILKCKEDDGQILMTIFYDVNPSHVKKQRGEF 119

Query: 117 -----------------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLF 153
                                   +  ++      + P  E+ +I+    D+  KL +L 
Sbjct: 120 GKAFEKTCQGKTEELKQRWSKALAHVATIAGEHSLNWPY-EAEMIQKIATDVLNKL-NLT 177

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           PS + D +VG+E+ + ++ S L   S E   +GIWG  GIGK+TIA A+ + +SS F+  
Sbjct: 178 PSKDFDGMVGLEAHLAKLNSLLCLESDEVKMIGIWGPAGIGKSTIARALNNQLSSSFQLK 237

Query: 214 YFMQNIRDESE---------KVGGLANI---HLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            +  +   +S+         K+    N+   HL   + RL   +VLI+  D+ DLK++++
Sbjct: 238 LWGTSREHDSKLWLQNHLLSKILNQENMKIHHLGAIKERLHDQRVLIILDDVDDLKKLEV 297

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L      F  GSR+I+TT D ++L+ H    +  ++ V   S  ++L +   +AF Q+  
Sbjct: 298 LAEERSWFGFGSRIIVTTEDKKILEAHG---IKDIYHVDFPSEEEALEILCLSAFKQSSV 354

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF E++N V +    +PL L V+G  L G S++EWE  ++ ++      I+ +LKV Y
Sbjct: 355 PDGFEEVANKVAELCGNLPLGLCVVGKSLCGESKQEWELQLSSIEASLDRGIEDILKVGY 414

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITM 440
           D L  + Q++FL  ACFF       V   L       + G+  L  KSLV  S    I M
Sbjct: 415 DRLTKKNQSLFLHIACFFNYEKVDYVTTMLADSNLDVRNGLKTLADKSLVHKSTYGHIVM 474

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS--LKELYL 496
           H LLQ++G +IV ++S  +PGK   L   ++I  VL   T   +  GI+ D+  + E+ +
Sbjct: 475 HHLLQQLGRQIVHEQS-DEPGKHQFLTEADEICDVLTTETGTGSVLGISFDTSNIGEVSV 533

Query: 497 G-----GCSNL--------------------------KRFPEISCNIE-------DLDLK 518
           G     G  NL                          K +P  S  +         L ++
Sbjct: 534 GKGAFEGMRNLRFLTIYRSLQIPEDLDYLPLLRLLHWKYYPRKSLPLRFQPERLVKLRMR 593

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            + +E+L   I +L  L  +DL   S LK + + L    +L  L L  C  L +LP  I 
Sbjct: 594 HSNLEKLWGGIQSLPNLKIIDLKLSSELKEIPN-LSKSTNLEELTLEYCTSLVELPSSIK 652

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           NL+ L+ LN+      ++  +   L+ L  L +  C RL + P++
Sbjct: 653 NLQKLKILNVDYCSMLQVIPTNINLASLERLDMGGCSRLTTFPDI 697



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 30/162 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP-SSIGNLSRLVDLDL 540
           +PT INL SL+ L +GGCS L  FP+IS NIE L+L +T IE++P S+ G LSRL  L++
Sbjct: 671 IPTNINLASLERLDMGGCSRLTTFPDISSNIEFLNLGDTDIEDVPPSAAGCLSRLDHLNI 730

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             CS             SL+RL          +P  I NL       L   D E IP  +
Sbjct: 731 --CS------------TSLKRLT--------HVPLFITNLV------LDGSDIETIPDCV 762

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLS 641
             L++L  L +++C +L+S+P LP     + A +C SLK+ S
Sbjct: 763 ICLTRLEWLSVESCTKLESIPGLPPSLRLLEADNCVSLKSFS 804



 Score = 42.4 bits (98), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 27/136 (19%)

Query: 511 NIEDLDLK-ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
           N++ +DLK  + ++E+P+ +   + L +L L  C+ L  + S + NL+ L+ LN+  C  
Sbjct: 609 NLKIIDLKLSSELKEIPN-LSKSTNLEELTLEYCTSLVELPSSIKNLQKLKILNVDYCSM 667

Query: 570 LEKLPEEIGNLESL---------------------EYLNLAEKDFEKI-PSSMKQLSKLS 607
           L+ +P  I NL SL                     E+LNL + D E + PS+   LS+L 
Sbjct: 668 LQVIPTNI-NLASLERLDMGGCSRLTTFPDISSNIEFLNLGDTDIEDVPPSAAGCLSRLD 726

Query: 608 DLRL--QNCKRLQSLP 621
            L +   + KRL  +P
Sbjct: 727 HLNICSTSLKRLTHVP 742


>gi|227438147|gb|ACP30563.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1799

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 216/689 (31%), Positives = 343/689 (49%), Gaps = 89/689 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F+SHL        I  F D  + R + I+P+L+ AI  S+ISIV
Sbjct: 13  RYRVFTSFHGPDVRKTFLSHLRKQFACNGISMFNDQAIERSHTIAPALTQAIRESRISIV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------DAGYC-------- 119
           + ++ YASS WCL+EL++IL+ K + GQIV+ +FY VDPS       D G          
Sbjct: 73  VLTKNYASSSWCLDELLEILKCKEEMGQIVMTIFYGVDPSHVRKQTGDFGKVLKKTCSGK 132

Query: 120 ---PSLGW-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+             ES +IE    D+S KL+     D +D +VG+E
Sbjct: 133 TEEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFED-MVGIE 191

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           + + +++S L S       VGI G  GIGKTTIA A++S +SS F+ + FM+N+R     
Sbjct: 192 AHLDKMQSLLHSDEDGAMIVGICGPAGIGKTTIARALHSRLSSGFQLTCFMENLRGSCNS 251

Query: 226 VG----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
            G                      G+   HL     RL  +KVLI+  D+ DL+Q++ L 
Sbjct: 252 GGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDLKVLIILDDVDDLQQLEALA 311

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
              + F  GSR+I+TT D +LL+ H  + + HV    E    ++  +F R AF Q+ P  
Sbjct: 312 DETNWFGDGSRIIVTTEDQELLEQHGITNIYHVDLPTE---KEARKIFCRYAFRQSLPPY 368

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           G+  L+    +    +P  L+V+GS L+G  E++WES + +L+      I+ VL+V YD 
Sbjct: 369 GYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGYDS 428

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHD 442
           L +++Q +F   A FF   +   V   L       ++G+  L  KSL+ IS+  ++ MH 
Sbjct: 429 LHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVMHK 488

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD----------- 489
           LLQ++G + ++++   +P KR  L   +DI  VL  ++   +  GI+ D           
Sbjct: 489 LLQQVGRQAIQRQ---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMDIS 545

Query: 490 -----SLKELYLGGCSNLKRFPEISCNI-EDLD----LKETAIEELPSSIGNLS----RL 535
                S++ L      N +    +  ++ ED++    LK    E  P      +     L
Sbjct: 546 ARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPEHL 605

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFE 594
           V+L LT+ + L+ +      L SL+++ L  CL L++LP ++ N  +LE L++   +   
Sbjct: 606 VELHLTD-TQLEQLWEGTQPLTSLKKMVLVSCLCLKELP-DLANATNLEILDVCGCQSLV 663

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +I SS+  L +L  L +  CK+LQ +P L
Sbjct: 664 EIHSSVGNLHRLQSLDMIFCKKLQVVPTL 692



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 252/567 (44%), Gaps = 113/567 (19%)

Query: 134  ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLL---SGSTEFNTVGIWGI 190
            ES +IE    D+S KL+    +D +D +VG+E+ +++++S L     G   F  VGI G 
Sbjct: 1080 ESEMIEKIARDVSNKLNSTVSTDFED-MVGIEAHLEKMQSLLHLDDEGGAMF--VGICGP 1136

Query: 191  GGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG----------------------G 228
             GIGKTTIA A++S +SS F+ S FM+N+R      G                      G
Sbjct: 1137 AGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNG 1196

Query: 229  LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
            +   HL     RL   KVLI+  D+ DLKQ++ L      F  GSRVI+           
Sbjct: 1197 MRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGSRVIL----------- 1245

Query: 289  RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
                   + E+      D+  +F R AF Q     GF +L   V+   + +PL L+V+GS
Sbjct: 1246 -------MLEL------DARQIFCRIAFRQLSAPHGFEKLVERVVNLCSNLPLGLRVMGS 1292

Query: 349  YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVM 408
             L+    ++WE+ + +L+   + DI+ VL+V YD L  ++Q +F   ACFF   D   V 
Sbjct: 1293 SLRRKKVDDWEAILQRLENSLNRDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQDDDRVK 1352

Query: 409  NFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLW 467
              L       ++G+  L  KSL+ IS    I MH LLQ++G E V    +++P KR  L 
Sbjct: 1353 AMLVDSNLDVRLGLKTLSYKSLIQISAEGTIVMHKLLQQVGREAVH---LQEPRKRQILI 1409

Query: 468  HPEDIYQVLN-------------ENTSLPTGINLDSLK---------------------- 492
                I  VL              + +++P G+ + +                        
Sbjct: 1410 DAHQICDVLENDYDSASVMGISFDTSTIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVR 1469

Query: 493  ------------------ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR 534
                              E+Y G C      PE   ++ +L    + +E+L   I  L+ 
Sbjct: 1470 MHLPEDMSFPPLLRLLHWEVYPGKCLPHTLRPE---HLVELCFVNSKLEQLWQGIQPLTN 1526

Query: 535  LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
            L  +DL+    LK V   L N   L+RLNL+GC  L ++P  IG+L  LE L +      
Sbjct: 1527 LKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISL 1585

Query: 595  KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            ++  S   L+ L  L +  C +L+ +P
Sbjct: 1586 QVFPSHLNLASLETLEMVGCWQLRKIP 1612



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 47/199 (23%)

Query: 488 LDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK++ L  C  LK  P++  + N+E LD+    ++ E+ SS+GNL RL  LD+  C 
Sbjct: 625 LTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCK 684

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----------------EEI-------GNLE 581
            L+ V + L NL SL  L + G  ++ +LP                EE         +L+
Sbjct: 685 KLQVVPT-LFNLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQ 743

Query: 582 SLEYLNLA-------------------EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            LE    A                       E+IP  +K L  L +L +  C +L SLPE
Sbjct: 744 CLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLPE 803

Query: 623 LPCG-SSIHARHCTSLKTL 640
           LP   +++    C SL+TL
Sbjct: 804 LPRSLTTLTVYKCPSLETL 822



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 14/149 (9%)

Query: 460  PGK-RSRLWHPEDIYQVLNENTSLPT---GIN-LDSLKELYLGGCSNLKRFPEIS--CNI 512
            PGK       PE + ++   N+ L     GI  L +LK++ L G  +LK  P++S   ++
Sbjct: 1491 PGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHL 1550

Query: 513  EDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
            + L+L    ++ E+PSSIG+L +L +L++  C  L+   S L NL SL  L + GC +L 
Sbjct: 1551 KRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLR 1609

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            K+P       S + L + +   E+ P S+
Sbjct: 1610 KIP-----YVSTKSLVIGDTMLEEFPESL 1633


>gi|2245043|emb|CAB10461.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
 gi|7268437|emb|CAB80957.1| disease resistance RPP5 like protein [Arabidopsis thaliana]
          Length = 1256

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 241/692 (34%), Positives = 348/692 (50%), Gaps = 85/692 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF SF G DVR  F+SHL  AL R  I TF+D  + R   I+ +L +AI  ++ISIV
Sbjct: 12  RYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------------------DA 116
           IFSE YASS WCLNELV+I +   K  Q+V+PVFY VDPS                  D 
Sbjct: 72  IFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDK 131

Query: 117 GYCPSLGWM-GIFDI-----------PTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                  W+  + DI           PT E+ +++   ND+S KL  L P    D  VG+
Sbjct: 132 PEDQKQRWVKALTDISNLAGEDLRNGPT-EAFMVKKIANDVSNKLFPL-PKGFGD-FVGI 188

Query: 165 ESIIKEIESQLLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           E  IK I+S L   S E    VGIWG  GIGK+TI  A++S +SS F    F+       
Sbjct: 189 EDHIKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSG 248

Query: 224 EKVGG---------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
             V G         L+ I         H     +RL   KVLI+  D+ +L+ +  L+G+
Sbjct: 249 SDVSGMKLSWEKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGK 308

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            + F  GSR+I+ T+D QLLK H    +  V+EV+  S   +L + S+ AFG++ P   F
Sbjct: 309 AEWFGSGSRIIVITQDKQLLKAHE---IDLVYEVELPSQGLALKMISQYAFGKDSPPDDF 365

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            EL+  V +    +PL L VLGS LKG  ++EW   + +L+      I++ L+V YD L+
Sbjct: 366 KELAFEVAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLN 425

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLL 444
            + + +F   ACFF G     V   L+       +G++ L  KSL+ I+ +  I MH+LL
Sbjct: 426 KKNRELFKCIACFFNGFKVSNVKELLE-----DDVGLTMLADKSLIRITPDGDIEMHNLL 480

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GIN-----LDSLKELYLG 497
           +++G EI R +S  +P KR  L + EDI +V+ E T   T  GI      L S + L + 
Sbjct: 481 EKLGREIDRAKSKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVI 540

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
              + K       N++ L++   +  +LP  +  L   + L   N   LKS+ S     K
Sbjct: 541 NEESFKGMR----NLQYLEIGHWSEIDLPQGLVYLPLKLKLLKWNYCPLKSLPS---TFK 593

Query: 558 SLRRLNL-SGCLKLEKLPEEIGNLESLEYLNLA-EKDFEKIPSSMKQLSKLSDLRLQNCK 615
           +   +NL     KLEKL E    L SL+ ++L    + ++IP  +     L +L L  C+
Sbjct: 594 AEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIP-DLSLAINLEELNLSKCE 652

Query: 616 RLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
            L +LP     SSI  ++   L+TL  S  LL
Sbjct: 653 SLVTLP-----SSI--QNAIKLRTLYCSGVLL 677



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 53/86 (61%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS  IE L L+ TAIEE+P  I +L+RL  L + 
Sbjct: 978  LPTDVNLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLTRLSVLLMY 1037

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L SL   + + C
Sbjct: 1038 CCQRLKNISPNIFRLTSLMVADFTDC 1063



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 7/137 (5%)

Query: 487  NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            +L SLK + L    NL   P++S   N++ L L    ++  LPS+IGNL RLV L++  C
Sbjct: 913  SLGSLKRMDLSESENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKEC 972

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            +GL+ + + + NL SL  L+LSGC  L   P     +E L   N A    E++P  ++ L
Sbjct: 973  TGLELLPTDV-NLSSLIILDLSGCSSLRTFPLISTRIECLYLENTA---IEEVPCCIEDL 1028

Query: 604  SKLSDLRLQNCKRLQSL 620
            ++LS L +  C+RL+++
Sbjct: 1029 TRLSVLLMYCCQRLKNI 1045



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 4/90 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLKE+YL G   LK  P++S   N+E L L    ++  LPSSI N ++L++LD+ +C 
Sbjct: 754 LGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCK 813

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L+S  + L NL+SL  LNL+GC  L   P
Sbjct: 814 KLESFPTDL-NLESLEYLNLTGCPNLRNFP 842



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 25/195 (12%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
           S PT +NL+SL+ L L GC NL+ FP I       ++ +   E E+     N +    LD
Sbjct: 817 SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLD 876

Query: 540 LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             +C     +    C  +   L  L++SGC K EKL E I +L SL+ ++L+E ++  +I
Sbjct: 877 YLDC----LMRCMPCEFRPEYLTFLDVSGC-KHEKLWEGIQSLGSLKRMDLSESENLTEI 931

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLS---NSSTLLTR 649
           P  + + + L  L L  CK L +LP     L     +  + CT L+ L    N S+L+  
Sbjct: 932 P-DLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSSLI-- 988

Query: 650 SSKHWDIFNFSNCSN 664
                 I + S CS+
Sbjct: 989 ------ILDLSGCSS 997



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 41/194 (21%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDL-KETAIEELPSSIGNLSRLVD 537
           +LP G    SLK++ LG  +NLK  P++S   N+E+L+L K  ++  LPSSI N  +L  
Sbjct: 614 TLPLG----SLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKLRT 669

Query: 538 LDLTNCSG-----LKSVSSRLCNL--------------------KSLRRLNLSGCLKLEK 572
           L    CSG     LKS+   +CNL                    + L+RL    C  +++
Sbjct: 670 L---YCSGVLLIDLKSLEG-MCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYC-PVKR 724

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR 632
           LP      E L  L +   D EK+    + L  L ++ L   K L+ +P+L    ++   
Sbjct: 725 LPSNF-KAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERL 783

Query: 633 H---CTSLKTLSNS 643
           +   C SL TL +S
Sbjct: 784 YLFGCESLVTLPSS 797


>gi|13517468|gb|AAK28805.1|AF310960_1 resistance-like protein P2-A [Linum usitatissimum]
          Length = 1196

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 175/506 (34%), Positives = 274/506 (54%), Gaps = 50/506 (9%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVFL FRG D R  F SHL +AL  +KI  FID+KL +   I   L S ++   +S+V
Sbjct: 22  EYDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESID-ELISILQRCPLSVV 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----AGYCPSLGWMGIFDI 130
           +FSE +A S WCL E+V I E   K G  V+PVFY VDPSD    +       WM     
Sbjct: 81  VFSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKSHRTGPKRWMDALKA 140

Query: 131 PTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSG 178
                         ES LI+  V  + K+L D+ PS N++ LV + S I E+E  L +  
Sbjct: 141 VAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMGSRIFEVERLLAMDK 200

Query: 179 STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG--SYFMQNIRDESEKVGGLANI---- 232
             +   +G+W +GG+GKTT+A A Y  ++S  +G    F++N+ +  EK  G+  I    
Sbjct: 201 LDDTCIIGLWEMGGVGKTTLAEACYDRVTSSNKGIKHLFVRNVNEICEKHHGVEKIVHKL 260

Query: 233 ---------------HLNFERRRLSRMKVLIVFYDLTDLKQIDL--LIGRLDGFVPGSRV 275
                          ++ + R RLSR +V +V  ++  L+Q+ L  +      F  GSR+
Sbjct: 261 YSKLLDENNIDREDLNIGYRRERLSRSRVFVVLDNVETLEQLALGYVFNLSKVFAAGSRI 320

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           IITTR+ ++L+N     +  ++ V+ L+  +S  LFS +AF Q+ P   ++  S +   Y
Sbjct: 321 IITTRNKKVLQN----AMAKIYNVECLNDEESTRLFSLHAFKQDRPQDNWMGKSRLATSY 376

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
             G PLAL++LG  L G     W S +  L++  ++ I+ +L+ SYD L  EE+ IF+D 
Sbjct: 377 CKGNPLALKILGGALYGEDIHYWRSFLTGLRQPGNLGIENILRRSYDKLGKEEKKIFMDV 436

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI----SNNKITMHDLLQEMGGEI 451
           AC   G  +  +++++     S+ + +  L+ KSL+T     + +KI +HDLL+EM   I
Sbjct: 437 ACLLYGMSRSRLIDYMATMYSSSYVRVKDLIDKSLLTCVSSKNEDKIEVHDLLKEMAWNI 496

Query: 452 VRQESIKDPGKRSRLWHPEDIYQVLN 477
           V++E     GKRSRL  P+D++++L+
Sbjct: 497 VKEEP--KLGKRSRLVDPDDVHKLLS 520



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 7/149 (4%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCS 544
            + +L  L++  C +L   P    N+  L    L ET I+ LPSSI  L +L  +DL +C 
Sbjct: 891  MSTLTSLHVFCCRSLTSIPTSISNLRSLISLCLVETGIKSLPSSIQELRQLFSIDLRDCK 950

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+S+ + +  L  L  L++SGC  +  LPE   NL++L       K  + +PS+  +L 
Sbjct: 951  SLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKTLNVSGC--KSLQALPSNTCKLL 1008

Query: 605  KLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
             L+ +    C +L Q++P E      +HA
Sbjct: 1009 YLNTIHFDGCPQLDQAIPGEFVANFLVHA 1037



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 73/188 (38%), Gaps = 54/188 (28%)

Query: 488 LDSLKELYLGGCSNLKRFP----------------EISC-------NIEDLDLKETAIEE 524
           L  L  L +  C NLKR P                E++C        +E+ DL  T++ E
Sbjct: 722 LTKLVTLDINYCKNLKRLPPKLDSKLLKHVRMKNLEVTCCPEIDSRELEEFDLSGTSLGE 781

Query: 525 LPSSIGNLS-----RLVDLDLTNCSGLKSVSSRL-------------------------- 553
           LPS+I N+      RL   ++T   G+ ++  R                           
Sbjct: 782 LPSAIYNVKQNGVLRLHGKNITKFPGITTILKRFKLSLSGTSIREIDLADYHQQHQTSDG 841

Query: 554 CNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
             L     L+L+G  +LE LP  I N+ S E    +    E +P   + +S L+ L +  
Sbjct: 842 LLLPKFHNLSLTGNRQLEVLPNSIWNMISEELFICSSPLIESLPEISEPMSTLTSLHVFC 901

Query: 614 CKRLQSLP 621
           C+ L S+P
Sbjct: 902 CRSLTSIP 909


>gi|147774849|emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]
          Length = 1478

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 188/541 (34%), Positives = 290/541 (53%), Gaps = 68/541 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           + DVFLSFRG+D R  F   L   L  + +  F D++ LNRG++I   L  AIE S   I
Sbjct: 20  RWDVFLSFRGEDTRGTFTDCLYTRLQHKGVRAFRDNEGLNRGDKIDRCLLDAIEDSAAFI 79

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------ 115
            I S  YA+SRWCL EL K+ E      ++++PVFY VDPS                   
Sbjct: 80  AIISPNYANSRWCLEELAKVCEC----NRLILPVFYNVDPSHVRGQRGPFLQHFKDLEAR 135

Query: 116 ------AGYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                 + +  ++ ++G     + +    E+ +I+  +N++  +LS    S      VG+
Sbjct: 136 FGEEDVSKWRKAMKYVGGLAGFVVNGFGDEADVIQTLLNNVLAELSKW--SGVPAFTVGL 193

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           +S ++E+   L   S     +G++G GG+GK+T+A A+Y+ + +HFE   F+ N++    
Sbjct: 194 DSRVEEVLELLDLKSNSIRVLGLYGPGGVGKSTLAKALYNKLVAHFENRSFISNVKKYLA 253

Query: 225 KVGGLANI-------------HLNFERRRLSRMK-------VLIVFYDLTDLKQIDLLIG 264
           +  GL ++             H+N     L  +K       VLI+  D+ D  Q+  + G
Sbjct: 254 QENGLLSLQIKLIGDLSGMASHVNEVNAGLVAIKSIVQEKRVLIILDDVDDASQLTAIXG 313

Query: 265 R---LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           R      F  GSR+IITTRD ++L     +    ++EVK+L+  +SL LFS  A G+  P
Sbjct: 314 RKKWRKWFYEGSRIIITTRDREVLHELHEN---ELYEVKQLNSPESLQLFSHYALGRVKP 370

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKVLKVS 380
              +L LS  ++    G+PLAL+V GS L    + EEWE A+ KLK++  MD+Q VLK+S
Sbjct: 371 TPDYLPLSKQIVSLTGGLPLALEVFGSSLYDKRKIEEWEDALQKLKQIRPMDLQGVLKIS 430

Query: 381 YDGLDDEEQNIFLDTACFF--KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-K 437
           YDGLD++E+  FLD AC F   G  +   ++ L  C F A+IGI  LV KSL+ I+ +  
Sbjct: 431 YDGLDEQEKCXFLDIACLFIKMGMKKEDAIDILKGCGFRAEIGIKVLVDKSLLKIAEDYT 490

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLKELY 495
           + MHD L++MG +IV  E+ +D G RSRLW   +I +VL  N  +    G+ LD + +++
Sbjct: 491 LWMHDQLRDMGRQIVLHENHEDLGMRSRLWDRSEILRVLQNNLGSRCIQGMVLDFVSDIF 550

Query: 496 L 496
           +
Sbjct: 551 M 551



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 3/127 (2%)

Query: 498 GCSNLKRFPEISCN--IEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC 554
           GC NL   P++S N  +E L L+    + ++  SIG++  L+ LDL+ C  L    S + 
Sbjct: 726 GCCNLTAIPDLSGNQALEKLILQHCHGLVKIHKSIGDIISLLHLDLSECKNLVEFPSDVS 785

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
            LK+L  L LSGC KL++LPE I  ++SL  L L     EK+P S+ +L++L  L L NC
Sbjct: 786 GLKNLXTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNC 845

Query: 615 KRLQSLP 621
           + L+ LP
Sbjct: 846 QSLKQLP 852



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 44/286 (15%)

Query: 414  CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG-EIVRQESIKDPGKRSRLWHPEDI 472
            CRF +K+  S     S+V +  +  ++ DL  ++GG + +R+  ++   +   L  PE I
Sbjct: 939  CRFLSKLPASIEGLASMVXLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESL--PEAI 996

Query: 473  YQVLNENT---------SLPTGI-NLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKE 519
              + + NT          LP  I  L++L  L L  C  L+R P       ++  L ++E
Sbjct: 997  GSMGSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLPGSIGXLKSLHHLXMEE 1056

Query: 520  TAIEELPSSIGNLSRLV--------DLDLTNCSG--------------LKSVSSRLCNLK 557
            TA+ +LP S G L+ L+         L+L    G              L  + +   NL 
Sbjct: 1057 TAVRQLPESFGMLTSLMRLLMAKRPHLELPQALGPTETKVLGAEENSELIVLPTSFSNLS 1116

Query: 558  SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
             L  L+        K+P++   L SLE LNL   +F  +PSS++ LS L  L L +C+ L
Sbjct: 1117 LLYELDARAWKISGKIPDDFDKLSSLEILNLGRNNFSSLPSSLRGLSILRKLLLPHCEEL 1176

Query: 618  QSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            ++LP LP     ++A +C +L+ +S+ S L +         N +NC
Sbjct: 1177 KALPPLPSSLMEVNAANCYALEVISDLSNLESLQE-----LNLTNC 1217



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 26/161 (16%)

Query: 487  NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNC 543
            +L +L+ L L  C ++   P+   N++ L    +  + + ELP+SIG+LS L DL +  C
Sbjct: 880  SLTNLERLSLMRCQSIYAIPDSVXNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGXC 939

Query: 544  ----------SGLKSV-------------SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
                       GL S+               ++  LK+LRRL +  C +LE LPE IG++
Sbjct: 940  RFLSKLPASIEGLASMVXLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPEAIGSM 999

Query: 581  ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             SL  L + +    ++P S+ +L  L  L L  CKRL+ LP
Sbjct: 1000 GSLNTLIIVDAPMTELPESIGKLENLIMLNLNKCKRLRRLP 1040



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 26/163 (15%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           + L  L+ L L  C +LK+ P     +E   +L   ++A+EE+P S G+L+ L  L L  
Sbjct: 832 LRLTRLERLSLNNCQSLKQLPTCIGKLESLRELSFNDSALEEIPDSFGSLTNLERLSLMR 891

Query: 543 CSGLKSVSSRLCNLK-----------------------SLRRLNLSGCLKLEKLPEEIGN 579
           C  + ++   + NLK                       +L+ L++  C  L KLP  I  
Sbjct: 892 CQSIYAIPDSVXNLKLLTEFLMNGSPVNELPASIGSLSNLKDLSVGXCRFLSKLPASIEG 951

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           L S+  L L       +P  +  L  L  L ++ CKRL+SLPE
Sbjct: 952 LASMVXLQLDGTSIMDLPDQIGGLKTLRRLEMRFCKRLESLPE 994



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 66/138 (47%), Gaps = 27/138 (19%)

Query: 488 LDSLKELYLGGCSNLKRFPE-ISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L +L  L L GCS LK  PE IS   ++ +L L  T IE+LP S+  L+RL  L L NC 
Sbjct: 787 LKNLXTLILSGCSKLKELPENISYMKSLRELLLDGTVIEKLPESVLRLTRLERLSLNNCQ 846

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LK                        +LP  IG LESL  L+  +   E+IP S   L+
Sbjct: 847 SLK------------------------QLPTCIGKLESLRELSFNDSALEEIPDSFGSLT 882

Query: 605 KLSDLRLQNCKRLQSLPE 622
            L  L L  C+ + ++P+
Sbjct: 883 NLERLSLMRCQSIYAIPD 900


>gi|311992493|gb|ABR67409.2| TIR-NBS-LRR disease resistance protein [Cucumis melo subsp. melo]
          Length = 947

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 233/740 (31%), Positives = 356/740 (48%), Gaps = 176/740 (23%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R NF SHL+ AL ++ +  FIDDKL RG +IS +L  +I+ + ISIVI
Sbjct: 17  YDVFLSFRGEDTRTNFTSHLDMALRQKGVNVFIDDKLERGEQISETLFKSIQEALISIVI 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG-WMGIFD 129
           FS+ YASS WCL+ELV I+E K   GQIV+PVFY VDPSD       +  +L      F 
Sbjct: 77  FSQNYASSSWCLDELVNIIECKKSKGQIVLPVFYKVDPSDIRTQTGSFGEALAKHQAKFQ 136

Query: 130 IPTS---ESVLIEGN--------------VNDISKK-LSDL----FPSDNKDQLVGVESI 167
           I T    E++    N              + D+ KK LS L     P       V ++SI
Sbjct: 137 IKTQIWREALTTAANLSGWDLGTRKEANLIGDLVKKVLSTLNRTCTPLYVAKYPVAIDSI 196

Query: 168 IKEIESQ----LLSGSTEF--------------NTVGIWGIGGIGKTTIASAIYSNISSH 209
           ++ ++ +    L   S +F              N VGI+GIGGIGKTT+A A+Y+ I+S 
Sbjct: 197 LEYMKLRSHINLFEKSNKFHYQTQHEYEFDTDVNMVGIYGIGGIGKTTLAKALYNKIASQ 256

Query: 210 FEGSYFMQNIRDESEKVGGLANIH--------------LNFER------RRLSRMKVLIV 249
           FEG  F+ N+R+ S++  GLA +               +NF+R       RL   KVLIV
Sbjct: 257 FEGCCFLSNVREASKQFNGLAQLQESLLYEILTIYLKVVNFDRGINIIRNRLCSKKVLIV 316

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+  L+Q++ L+G  D F  GSR+I+TTR+  LL +H    + ++  + E     ++ 
Sbjct: 317 LDDVDKLEQLEALVGGRDWFGQGSRIIVTTRNKHLLSSHGFDEIHNILGLNE---EKAIE 373

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           LFS +AF +NHP++ +L LS     Y  G PLAL VLGS+L    + EW S +++ +   
Sbjct: 374 LFSWHAFKKNHPSSNYLNLSKRATSYCRGHPLALVVLGSFLCTRDQVEWCSILDEFENSL 433

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           + DI+ +L++S+DGL+D                                K+G   + G+S
Sbjct: 434 NKDIKDILQLSFDGLED--------------------------------KMGHKIVCGES 461

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------- 482
           L                            + GKRSRLW  +D++ VL  N+         
Sbjct: 462 L----------------------------ELGKRSRLWLVQDVWDVLVNNSGTDAVKAIK 493

Query: 483 -----PTGINLD-----SLKELYL------GGCSNLKRFPE------------------- 507
                PT +++D      +K L L        C+ ++  P+                   
Sbjct: 494 LDFPNPTKLDVDLQAFRKMKNLRLLIVQNARFCTKIEYLPDSLKWIKWHGFPQSTLPSCF 553

Query: 508 ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
           I+ N+  LDL+ + I+     + +  RL  +DL+  + L+ +        +L  L L  C
Sbjct: 554 ITKNLVGLDLQHSFIKTFEKRLKDCERLKHVDLSYSTLLEQIPD-FSAASNLGELYLINC 612

Query: 568 LKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
             L  + + + +L +L  LNL    + +K P     LS L +LRL  CK+L+ +P+L   
Sbjct: 613 TNLGMIDKSLFSLNNLIVLNLDGCSNLKKFPRGYFMLSSLKELRLSYCKKLEKIPDLSAA 672

Query: 627 SS---IHARHCTSLKTLSNS 643
           S+   ++ + CT+L+ +  S
Sbjct: 673 SNLERLYLQECTNLRLIHES 692



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 5/144 (3%)

Query: 482 LPTG-INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVD 537
            P G   L SLKEL L  C  L++ P++S   N+E L L+E T +  +  S+G+L +L  
Sbjct: 642 FPRGYFMLSSLKELRLSYCKKLEKIPDLSAASNLERLYLQECTNLRLIHESVGSLDKLDH 701

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL  C+ L  + S L  LKSL+ L LS C KLE  P    N++SL +L+L     +++P
Sbjct: 702 LDLRQCTNLSKLPSHL-RLKSLQNLELSRCCKLESFPTIDENMKSLRHLDLDFTAIKELP 760

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP 621
           SS+  L++L  L L +C  L SLP
Sbjct: 761 SSIGYLTELCTLNLTSCTNLISLP 784



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 108/255 (42%), Gaps = 66/255 (25%)

Query: 444 LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLK 503
           LQE     +  ES+    K   L    D+ Q  N  + LP+ + L SL+ L L  C  L+
Sbjct: 680 LQECTNLRLIHESVGSLDKLDHL----DLRQCTNL-SKLPSHLRLKSLQNLELSRCCKLE 734

Query: 504 RFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
            FP I  N++ L   DL  TAI+ELPSSIG L+ L  L+LT+C+ L S+ + +  L++L 
Sbjct: 735 SFPTIDENMKSLRHLDLDFTAIKELPSSIGYLTELCTLNLTSCTNLISLPNTIYLLRNLD 794

Query: 561 RLNLSGCLKLEKLPEE-------------------------------------------- 576
            L LSGC +    P +                                            
Sbjct: 795 ELLLSGCSRFRIFPHKWDRSIQPVCSPTKMIETTSWSLEFPHLLVPNESLFSHFTLLDLK 854

Query: 577 ---IGNLESLEY----------LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
              I N + LE           L L+E  F  +PS + +   L +L L+NCK LQ +P L
Sbjct: 855 SCNISNAKFLEILCDVAPFLSDLRLSENKFSSLPSCLHKFMSLWNLELKNCKFLQEIPNL 914

Query: 624 PCG-SSIHARHCTSL 637
           P     + A  C SL
Sbjct: 915 PKNIQKMDASGCESL 929



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 114/274 (41%), Gaps = 72/274 (26%)

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------------PT 484
           +++   L  +MG +IV  ES+ + GKRSRLW  +D++ VL  N+              PT
Sbjct: 442 QLSFDGLEDKMGHKIVCGESL-ELGKRSRLWLVQDVWDVLVNNSGTDAVKAIKLDFPNPT 500

Query: 485 GINLD-----SLKELYL------GGCSNLKRFPE-------------------ISCNIED 514
            +++D      +K L L        C+ ++  P+                   I+ N+  
Sbjct: 501 KLDVDLQAFRKMKNLRLLIVQNARFCTKIEYLPDSLKWIKWHGFPQSTLPSCFITKNLVG 560

Query: 515 LDLKETAIEELPSSIGNLSRLVDLDLT-----------------------NCSGLKSVSS 551
           LDL+ + I+     + +  RL  +DL+                       NC+ L  +  
Sbjct: 561 LDLQHSFIKTFEKRLKDCERLKHVDLSYSTLLEQIPDFSAASNLGELYLINCTNLGMIDK 620

Query: 552 RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLR 610
            L +L +L  LNL GC  L+K P     L SL+ L L+  K  EKIP  +   S L  L 
Sbjct: 621 SLFSLNNLIVLNLDGCSNLKKFPRGYFMLSSLKELRLSYCKKLEKIP-DLSAASNLERLY 679

Query: 611 LQNCKRL----QSLPELPCGSSIHARHCTSLKTL 640
           LQ C  L    +S+  L     +  R CT+L  L
Sbjct: 680 LQECTNLRLIHESVGSLDKLDHLDLRQCTNLSKL 713


>gi|20270890|gb|AAM18462.1|AF440696_1 disease resistance protein RPP4 [Arabidopsis thaliana]
          Length = 1135

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 241/692 (34%), Positives = 348/692 (50%), Gaps = 85/692 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF SF G DVR  F+SHL  AL R  I TF+D  + R   I+ +L +AI  ++ISIV
Sbjct: 12  RYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------------------DA 116
           IFSE YASS WCLNELV+I +   K  Q+V+PVFY VDPS                  D 
Sbjct: 72  IFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDK 131

Query: 117 GYCPSLGWM-GIFDI-----------PTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                  W+  + DI           PT E+ +++   ND+S KL  L P    D  VG+
Sbjct: 132 PEDQKQRWVKALTDISNLAGEDLRNGPT-EAFMVKKIANDVSNKLFPL-PKGFGD-FVGI 188

Query: 165 ESIIKEIESQLLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           E  IK I+S L   S E    VGIWG  GIGK+TI  A++S +SS F    F+       
Sbjct: 189 EDHIKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSG 248

Query: 224 EKVGG---------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
             V G         L+ I         H     +RL   KVLI+  D+ +L+ +  L+G+
Sbjct: 249 SDVSGMKLSWEKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGK 308

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            + F  GSR+I+ T+D QLLK H    +  V+EV+  S   +L + S+ AFG++ P   F
Sbjct: 309 AEWFGSGSRIIVITQDKQLLKAHE---IDLVYEVELPSQGLALKMISQYAFGKDSPPDDF 365

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            EL+  V +    +PL L VLGS LKG  ++EW   + +L+      I++ L+V YD L+
Sbjct: 366 KELAFEVAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLN 425

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLL 444
            + + +F   ACFF G     V   L+       +G++ L  KSL+ I+ +  I MH+LL
Sbjct: 426 KKNRELFKCIACFFNGFKVSNVKELLE-----DDVGLTMLADKSLIRITPDGDIEMHNLL 480

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GIN-----LDSLKELYLG 497
           +++G EI R +S  +P KR  L + EDI +V+ E T   T  GI      L S + L + 
Sbjct: 481 EKLGREIDRAKSKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVI 540

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
              + K       N++ L++   +  +LP  +  L   + L   N   LKS+ S     K
Sbjct: 541 NEESFKGMR----NLQYLEIGHWSEIDLPQGLVYLPLKLKLLKWNYCPLKSLPS---TFK 593

Query: 558 SLRRLNL-SGCLKLEKLPEEIGNLESLEYLNLA-EKDFEKIPSSMKQLSKLSDLRLQNCK 615
           +   +NL     KLEKL E    L SL+ ++L    + ++IP  +     L +L L  C+
Sbjct: 594 AEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIP-DLSLAINLEELNLSKCE 652

Query: 616 RLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
            L +LP     SSI  ++   L+TL  S  LL
Sbjct: 653 SLVTLP-----SSI--QNAIKLRTLYCSGVLL 677



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 53/86 (61%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS  IE L L+ TAIEE+P  I +L+RL  L + 
Sbjct: 978  LPTDVNLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLTRLSVLLMY 1037

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L SL   + + C
Sbjct: 1038 CCQRLKNISPNIFRLTSLMVADFTDC 1063



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 7/137 (5%)

Query: 487  NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            +L SLK + L    NL   P++S   N++ L L    ++  LPS+IGNL RLV L++  C
Sbjct: 913  SLGSLKRMDLSESENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKEC 972

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            +GL+ + + + NL SL  L+LSGC  L   P     +E L   N A    E++P  ++ L
Sbjct: 973  TGLELLPTDV-NLSSLIILDLSGCSSLRTFPLISTRIECLYLENTA---IEEVPCCIEDL 1028

Query: 604  SKLSDLRLQNCKRLQSL 620
            ++LS L +  C+RL+++
Sbjct: 1029 TRLSVLLMYCCQRLKNI 1045



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 4/90 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLKE+YL G   LK  P++S   N+E L L    ++  LPSSI N ++L++LD+ +C 
Sbjct: 754 LGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCK 813

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L+S  + L NL+SL  LNL+GC  L   P
Sbjct: 814 KLESFPTDL-NLESLEYLNLTGCPNLRNFP 842



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 25/195 (12%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
           S PT +NL+SL+ L L GC NL+ FP I       ++ +   E E+     N +    LD
Sbjct: 817 SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLD 876

Query: 540 LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             +C     +    C  +   L  L++SGC K EKL E I +L SL+ ++L+E ++  +I
Sbjct: 877 YLDC----LMRCMPCEFRPEYLTFLDVSGC-KHEKLWEGIQSLGSLKRMDLSESENLTEI 931

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLS---NSSTLLTR 649
           P  + + + L  L L  CK L +LP     L     +  + CT L+ L    N S+L+  
Sbjct: 932 P-DLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSSLI-- 988

Query: 650 SSKHWDIFNFSNCSN 664
                 I + S CS+
Sbjct: 989 ------ILDLSGCSS 997



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 41/194 (21%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDL-KETAIEELPSSIGNLSRLVD 537
           +LP G    SLK++ LG  +NLK  P++S   N+E+L+L K  ++  LPSSI N  +L  
Sbjct: 614 TLPLG----SLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKLRT 669

Query: 538 LDLTNCSG-----LKSVSSRLCNL--------------------KSLRRLNLSGCLKLEK 572
           L    CSG     LKS+   +CNL                    + L+RL    C  +++
Sbjct: 670 L---YCSGVLLIDLKSLEG-MCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYC-PVKR 724

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR 632
           LP      E L  L +   D EK+    + L  L ++ L   K L+ +P+L    ++   
Sbjct: 725 LPSNF-KAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERL 783

Query: 633 H---CTSLKTLSNS 643
           +   C SL TL +S
Sbjct: 784 YLFGCESLVTLPSS 797


>gi|13517469|gb|AAK28806.1|AF310960_2 P2 rust resistance protein [Linum usitatissimum]
          Length = 1211

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 183/539 (33%), Positives = 289/539 (53%), Gaps = 73/539 (13%)

Query: 4   SSSSINMIPHP---KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           SSS+    P+    ++DVFL FRG D RH F SHL +AL  ++I TFID KL +   I  
Sbjct: 6   SSSAPRTSPYTGEWEYDVFLCFRG-DTRHGFTSHLLSALSDKQIRTFIDHKLAKTESID- 63

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L S ++   +S+V+FSE +A S WCL E+V I E   K G  V+PVFY VDP D     
Sbjct: 64  ELISILQRCALSVVVFSEKFADSEWCLEEVVTIAERMKKVGHRVLPVFYKVDPFDVTDEP 123

Query: 117 -GYCPSLG---------------WMGIFDIPTS-----------ESVLIEGNVNDISKKL 149
             Y  ++                WM   +   +           ES LI+  V  + K+L
Sbjct: 124 RSYMATIDREYKARSSFLEDKKRWMDAVNAVANCAGHTSQAIKIESELIKAVVETVQKQL 183

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
            D+ PS N++ LV + S I EIE  L +    +   +G+WG+GG+GKTT+A A Y  ++S
Sbjct: 184 IDMSPSINRNNLVAMGSRIFEIERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYERVTS 243

Query: 209 HFEG--SYFMQNIRDESEKVGGLANI-------------------HLNFERRRLSRMKVL 247
             +G    F++N+ +  EK  G+  I                   ++ + R RLSR +V 
Sbjct: 244 SNKGIKHLFVRNVNEICEKHHGVEKIVHKLYSKLLDENNIDREDLNIGYRRERLSRSRVF 303

Query: 248 IVFYDLTDLKQID-LLIGRL----DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
           +V  ++  L+Q++ L +G +      F  GSR+IITTR+ ++L+N     +  ++ V+ L
Sbjct: 304 VVLDNVETLEQLEQLALGYVFNLSKVFAAGSRIIITTRNKKVLQN----AMAKIYNVECL 359

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           +  +S+ LFS +AF Q+ P   + + S++ I Y  G PLAL++LG  L G     W S +
Sbjct: 360 NNKESIRLFSLHAFKQDRPQDNWTDKSHLAISYCKGNPLALKILGGALFGEDVHYWRSLL 419

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
             L++  ++ I+ +L+ SYD L  EE+ IF+D AC   G  +  +++++     S+ + +
Sbjct: 420 TGLRQSGNLGIESILRRSYDKLGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRV 479

Query: 423 SRLVGKSLVTI----SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
             L+ KSL+T     +   I +HDLL+EM   IV++E     GKRSRL  P+D++++L+
Sbjct: 480 KDLIDKSLLTCVPSENGEMIEVHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLS 536



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 24/159 (15%)

Query: 492  KELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSS 551
            +ELY+G    ++  PEIS                      +S L  L +  C  L S+ +
Sbjct: 885  EELYIGRSPLIESLPEIS--------------------EPMSTLTSLHVFCCRSLTSIPT 924

Query: 552  RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLR 610
             + NL+SLR L L     ++ LP  I  L  L  + L + K  E IP+S+ +LSKL    
Sbjct: 925  SISNLRSLRSLRLVET-GIKSLPSSIHELRQLHSICLRDCKSLESIPNSIHKLSKLGTFS 983

Query: 611  LQNCKRLQSLPELPCG-SSIHARHCTSLKTL-SNSSTLL 647
            +  C+ + SLPELP     +  R C SL+ L SN+  LL
Sbjct: 984  MYGCESIPSLPELPPNLKELEVRDCKSLQALPSNTCKLL 1022



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 7/149 (4%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            + +L  L++  C +L   P    N+  L    L ET I+ LPSSI  L +L  + L +C 
Sbjct: 905  MSTLTSLHVFCCRSLTSIPTSISNLRSLRSLRLVETGIKSLPSSIHELRQLHSICLRDCK 964

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+S+ + +  L  L   ++ GC  +  LPE   NL+ LE  +   K  + +PS+  +L 
Sbjct: 965  SLESIPNSIHKLSKLGTFSMYGCESIPSLPELPPNLKELEVRDC--KSLQALPSNTCKLL 1022

Query: 605  KLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
             L+ +  + C ++ Q++P E      +HA
Sbjct: 1023 YLNRIYFEECPQVDQTIPAEFMANFLVHA 1051


>gi|13517480|gb|AAK28811.1|AF310966_1 resistance-like protein P-B [Linum usitatissimum]
          Length = 1211

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 183/539 (33%), Positives = 289/539 (53%), Gaps = 73/539 (13%)

Query: 4   SSSSINMIPHP---KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           SSS+    P+    ++DVFL FRG D RH F SHL +AL  ++I TFID KL +   I  
Sbjct: 6   SSSAPRTSPYTGEWEYDVFLCFRG-DTRHGFTSHLLSALSDKQIRTFIDHKLAKTESID- 63

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L S ++   +S+V+FSE +A S WCL E+V I E   K G  V+PVFY VDP D     
Sbjct: 64  ELISILQRCALSVVVFSEKFADSEWCLEEVVTIAERMKKVGHRVLPVFYKVDPFDVTDEP 123

Query: 117 -GYCPSLG---------------WMGIFDIPTS-----------ESVLIEGNVNDISKKL 149
             Y  ++                WM   +   +           ES LI+  V  + K+L
Sbjct: 124 RSYMATIDREYKARSSFLEDKKRWMDAVNAVANCAGHTSQAIKIESELIKAVVETVQKQL 183

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
            D+ PS N++ LV + S I EIE  L +    +   +G+WG+GG+GKTT+A A Y  ++S
Sbjct: 184 IDMSPSINRNNLVAMGSRIFEIERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYERVTS 243

Query: 209 HFEG--SYFMQNIRDESEKVGGLANI-------------------HLNFERRRLSRMKVL 247
             +G    F++N+ +  EK  G+  I                   ++ + R RLSR +V 
Sbjct: 244 SNKGIKHLFVRNVNEICEKHHGVEKIVHKLYSKLLDENNIDREDLNIAYRRERLSRSRVF 303

Query: 248 IVFYDLTDLKQID-LLIGRL----DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
           +V  ++  L+Q++ L +G +      F  GSR+IITTR+ ++L+N     +  ++ V+ L
Sbjct: 304 VVLDNVETLEQLEQLALGYVFNLSKVFAAGSRIIITTRNKKVLQN----AMAKIYNVECL 359

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           +  +S+ LFS +AF Q+ P   + + S++ I Y  G PLAL++LG  L G     W S +
Sbjct: 360 NNKESIRLFSLHAFKQDRPQDNWTDKSHLAISYCKGNPLALKILGGALFGEDVHYWRSLL 419

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
             L++  ++ I+ +L+ SYD L  EE+ IF+D AC   G  +  +++++     S+ + +
Sbjct: 420 TGLRQSGNLGIESILRRSYDKLGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVRV 479

Query: 423 SRLVGKSLVTI----SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
             L+ KSL+T     +   I +HDLL+EM   IV++E     GKRSRL  P+D++++L+
Sbjct: 480 KDLIDKSLLTCVPSENGEMIEVHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLS 536



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 7/149 (4%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            + +L  L++  C +L   P    N+  L    L ET I+ LPSSI  L +L  + L +C 
Sbjct: 905  MSTLTSLHVFCCRSLTSIPTSISNLRSLRSLRLVETGIKSLPSSIHELRQLHSICLRDCK 964

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+S+ + +  L  L   ++SGC  +  LPE   NL+ LE  +   K  + +PS+  +L 
Sbjct: 965  SLESIPNSIHKLSKLGTFSMSGCESIPSLPELPPNLKELEVRDC--KSLQALPSNTCKLL 1022

Query: 605  KLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
             L+ +  + C ++ Q++P E      +HA
Sbjct: 1023 YLNRIYFEECPQVDQTIPAEFMANFLVHA 1051


>gi|105922722|gb|ABF81433.1| TIR-NBS-TIR type disease resistance protein [Populus trichocarpa]
          Length = 1446

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 225/747 (30%), Positives = 348/747 (46%), Gaps = 195/747 (26%)

Query: 44  IETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQ 102
           I+ ++DD+ L RG  I P+L  AIE S+ S++IFS  YASS WCL+ELVKI++   + GQ
Sbjct: 96  IDVYMDDRELERGKAIEPALWKAIEESRFSVIIFSRDYASSPWCLDELVKIVQCMKEMGQ 155

Query: 103 IVVPVFYLVDPSDAG-----YCPSLG---------------W---------MGIFDIPT- 132
            V+PVFY VDPS+       Y  + G               W         +  +DI   
Sbjct: 156 TVLPVFYDVDPSEVTERKRKYEEAFGEHEQNFKENLEKVRNWKDCLSTVANLSGWDIRNR 215

Query: 133 SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGG 192
           +ES  I+     IS KLS   P+ +K +LVG++S ++ +                   G 
Sbjct: 216 NESESIKIIAEYISYKLSVTMPTISK-KLVGIDSRVEVLN------------------GY 256

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH------LNFER-------- 238
           IG+    +           GS F++N+R++  K  G   +       +  ER        
Sbjct: 257 IGEEGGKAIFIGICGMGGIGSCFLENVREDFAKKDGPRRLQEQLLSEILMERASVWDSYR 316

Query: 239 -----RRLSRMK-VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
                +R SR+K +L +  D+ D KQ++        F PGSR+IIT+RD  +L  +  ++
Sbjct: 317 GIEMIKRRSRLKKILHILDDVDDKKQLEFFAAEPGWFGPGSRIIITSRDTNVLTGNDDTK 376

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           +   +E ++L+ +D+L LFS+ AF  + P   F+ELS  V+ YANG+PLA++V+GS+L  
Sbjct: 377 I---YEAEKLNDDDALMLFSQKAFKNDQPDEDFVELSKQVVGYANGLPLAIEVIGSFLYA 433

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            S  EW  A+N++  +P   I  VL++S+DGL + ++ IFLD ACF  G     +   L+
Sbjct: 434 RSIPEWRGAINRMNEIPDGKIIDVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRILE 493

Query: 413 ACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKD------------- 459
           +  F A IGI  L+ +SL+++S +++ MH+LLQ MG EIVR ES ++             
Sbjct: 494 SRGFHAGIGIPVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 553

Query: 460 --------------------PGKRSRLWH-----------------------PEDIYQVL 476
                               PG +   W+                       PED+   L
Sbjct: 554 CLALMDSTGKEKIEAIFLDMPGIKEAQWNMEAFSKMSKLRLLKINNVQLSEGPEDLSNKL 613

Query: 477 N-------ENTSLPTGINLDSLKELYLG---------GCS---NLK-------------- 503
                    + SLP G+ +D L EL++          GC    NLK              
Sbjct: 614 RFLEWHSYPSKSLPAGLQVDELVELHMANSRIEQLWYGCKSAVNLKIINLSNSLNLIKTL 673

Query: 504 ---RFPEISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
              R P    N+E+L L+  T++ E+  S+    +L  + L +C  ++ + S L  ++SL
Sbjct: 674 DFTRIP----NLENLILEGCTSLSEVHPSLARHKKLEYVTLMDCVSIRILPSNL-EMESL 728

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAE------------------------KDFEK 595
           +   L GC KLEK P+ +GN+  L  L+L E                        K+ E 
Sbjct: 729 KVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVLSMNNCKNLES 788

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           IPSS++ L  L  L L  C  LQ++P+
Sbjct: 789 IPSSIRCLKSLKKLDLSGCSELQNIPQ 815



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 3/143 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GCS L++FP+I  N+  L    L ET I +L SSI +L  L  L
Sbjct: 719 LPSNLEMESLKVCILDGCSKLEKFPDIVGNMNKLTVLHLDETGITKLSSSIHHLIGLEVL 778

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + NC  L+S+ S +  LKSL++L+LSGC +L+ +P+ +G +E LE ++++     + P+
Sbjct: 779 SMNNCKNLESIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPA 838

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L  L  L L  CKR+   P
Sbjct: 839 SIFLLKSLKVLSLDGCKRIAVNP 861



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 11/177 (6%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L GCS L+  P+    +E   ++D+  T+I + P+SI  L  L 
Sbjct: 788 SIPSSIRCLKSLKKLDLSGCSELQNIPQNLGKVEGLEEIDVSGTSIRQPPASIFLLKSLK 847

Query: 537 DLDLTNCS--GLKSVSSRLCNLK---SLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAE 590
            L L  C    +     RL +L    SL  L+L  C L+   LPE+IG L SL+ L+L++
Sbjct: 848 VLSLDGCKRIAVNPTGDRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSQ 907

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
            +F  +P S+ QLS L  L L++C+ L+SLPE+P    +++   C  LK + +   L
Sbjct: 908 NNFVSLPESINQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCIRLKEIPDPIKL 964


>gi|297801406|ref|XP_002868587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314423|gb|EFH44846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1053

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 225/722 (31%), Positives = 364/722 (50%), Gaps = 129/722 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G+DVR  F+SHL+     + I TF D K+ RG+ I P L  AI  S++SIV
Sbjct: 14  RYHVFPSFHGEDVRRGFLSHLHYHFASKGIMTFNDQKIERGHTIGPELVRAIRESRVSIV 73

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG------------YCP-- 120
           + S+ YASS WCL+EL++IL+ K   GQIV+ +FY VDPSD               C   
Sbjct: 74  VLSKRYASSSWCLDELLEILKCKEDDGQIVLTIFYQVDPSDVRKQRGDFGSAFEITCQGK 133

Query: 121 ----SLGWM-GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                L W   +  + T          +E+ +I+    D+S KL +L P  + D +VG+E
Sbjct: 134 PEEVKLRWSNALAHVATIAGEHSLHWPNETEMIQKIATDVSNKL-NLTPLRDFDGMVGLE 192

Query: 166 SIIKEIESQLLSGSTEFN--TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           + + ++ S L  G  +     +GIWG+ GIGKTTIA A+++ +SS F+ + FM N++   
Sbjct: 193 AHLTKLHSLLWLGCDDAKPKMIGIWGLAGIGKTTIARALFNRLSSSFQLNCFMDNLKGSF 252

Query: 224 EKVGGLANIH--LNFERRRLSRM---------------------KVLIVFYDLTDLKQID 260
           + V  + + +  L+ + + LS++                     +VLI+  D+ DL+Q++
Sbjct: 253 KSVMDVDDYYSKLSLQTQLLSKILNQEDMKTYDLGAIKEWLQDQRVLIILDDVDDLEQLE 312

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L   L  F  GSR+I+TT D ++LK H    +  ++ V   S  ++L +  R+AF Q+ 
Sbjct: 313 ALAKELSWFGSGSRIIVTTEDNKILKAHG---IQDIYHVDYPSEKEALEILCRSAFKQSS 369

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
              GF EL+N V  +   +PLAL V+GS L G ++ EWE  ++++K      I+ +LKV 
Sbjct: 370 VPYGFEELANKVAAFCGKLPLALCVVGSSLHGETKYEWELQLSRIKASLDGKIETILKVG 429

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KIT 439
           YD L +++Q++FL  ACFF  N++ +++                L  KSLV IS + +I 
Sbjct: 430 YDRLSEKDQSLFLHIACFF--NNEVVLL----------------LADKSLVHISTDGRIV 471

Query: 440 MHD-LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLKELYL 496
           MH  LLQ++G +IV +        R  L    +I  VL   T   +  GI+ D+ K   +
Sbjct: 472 MHHYLLQKLGRQIVLE--------RQFLIEAAEIRDVLTNKTGTGSVIGISFDTSK---I 520

Query: 497 GGCSNLKRFPEISCNIEDLDLKET-----AIEELPSSIGNL------------------- 532
           G  S  K   E  CN++ L +  +        ++P S+  L                   
Sbjct: 521 GKVSVSKGAFEGMCNLQFLRIYSSLFGGEGTLQIPKSMKYLPENLKLLHWEHYPRKSRLP 580

Query: 533 -----SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
                 RLV+L + + S L+     L NLKS   ++LS   +L+++P  + N  +LE L 
Sbjct: 581 LRFQPERLVELHMPH-SNLEGGIKPLPNLKS---IDLSFSSRLKEIP-NLSNATNLETLT 635

Query: 588 LAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNS 643
           L       ++P S+  L KLS L+++ C++L+ +P    L     +   +C+ L +  + 
Sbjct: 636 LVRCTSLTELPFSISNLHKLSKLKMRVCEKLRVIPTNINLASLEEVDMNYCSQLSSFPDI 695

Query: 644 ST 645
           S+
Sbjct: 696 SS 697



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 30/159 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLDL 540
           +PT INL SL+E+ +  CS L  FP+IS NI+ L +  T IE++P S+ G  SRL  L++
Sbjct: 669 IPTNINLASLEEVDMNYCSQLSSFPDISSNIKTLGVGNTKIEDVPPSVAGCWSRLDCLEI 728

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            +              +SL RL  +                S+ +L+L+  + ++IP  +
Sbjct: 729 GS--------------RSLNRLTHAP--------------HSITWLDLSNSNIKRIPDCV 760

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
             L  L +L ++NC++L ++P LP    S++A  C SL+
Sbjct: 761 ISLPHLKELIVENCQKLVTIPALPPSLKSLNANECVSLE 799


>gi|13517466|gb|AAK28804.1|AF310959_1 resistance-like protein P1-B [Linum usitatissimum]
          Length = 1196

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 178/523 (34%), Positives = 284/523 (54%), Gaps = 56/523 (10%)

Query: 4   SSSSINMIPHP---KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           SSS+    P+    ++DVFL FRG D R  F SHL +AL  +KI  FID+KL +   I  
Sbjct: 6   SSSAPRTSPYTGEWEYDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESID- 64

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----A 116
            L S ++   +S+V+FSE +A S WCL E+V I E   K G  V+PVFY VDPSD    +
Sbjct: 65  ELISILQRCPLSVVVFSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKS 124

Query: 117 GYCPSLGWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  WM                   ES LI+  V  + K+L D+ PS N++ LV + 
Sbjct: 125 HRTGPKRWMDALKAVAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMG 184

Query: 166 SIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG--SYFMQNIRDE 222
           S I E+E  L +    +   +G+WG+GG+GKTT+A A Y  ++S  +G    F++N+ + 
Sbjct: 185 SRIFEVERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEM 244

Query: 223 SEKVGGLANI-------------------HLNFERRRLSRMKVLIVFYDLTDLKQID-LL 262
            EK  G+  I                   ++ + R RLSR++V +V  ++  L+Q++ L 
Sbjct: 245 CEKHHGVDKIVHKLYSKLLDENNIDREDLNIAYRRERLSRLRVFVVLDNVETLEQLEKLA 304

Query: 263 IGRL----DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +G +      F  GSR+IITTR+ ++L+N     +  ++ V+ L+  +S+ LFS +AF Q
Sbjct: 305 LGYVFNLSKVFAAGSRIIITTRNKKVLQN----AMAKIYNVECLNDKESIRLFSLHAFKQ 360

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           + P   ++  S +   Y  G PLAL++LG  L       W+S +  L++  ++ ++ +L+
Sbjct: 361 DRPQDNWMGKSRLATSYCKGNPLALKILGGALFDEDVHYWKSLLTGLRQSGNLGMETILR 420

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI----S 434
            SYD L  EE+ IF+D AC   G  +  +++++     S+ + +  L+ KSL+T     +
Sbjct: 421 RSYDKLGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVKVKDLIDKSLLTCVPSEN 480

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
              I +HDLL+EM   IV++E     GKRSRL  P+D++++L+
Sbjct: 481 GEMIEVHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLS 521



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 21/222 (9%)

Query: 429  SLVTISNNKITMHDLLQEM----GGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN----- 479
            SL++ S  +I + D  Q+     G  + R +++   G R     P  I+ +++E+     
Sbjct: 817  SLISTSIREIDLADYHQQHQTSDGLLLPRFQNLFLAGNRQLEVLPNGIWNMISEDLLIGR 876

Query: 480  ----TSLP-TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLK---ETAIEELPSSIGN 531
                 SLP     +++L  L +  C +L   P    N+  L      +T I+ LPSSI  
Sbjct: 877  SPLIESLPEISEPMNTLTSLEVFYCRSLTSIPTSISNLRSLRSLRLSKTGIKSLPSSIHE 936

Query: 532  LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
            L +L  +DL NC  L+S+ + + NL SL   ++SGC  +  LPE   NL++L       K
Sbjct: 937  LRQLYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELPPNLKTLNVSGC--K 994

Query: 592  DFEKIPSSMKQLSKLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
              + +PS+  +L  L+ +  + C ++ Q++P E      +HA
Sbjct: 995  SLQALPSNTCKLLYLNRIYFEECPQVDQTIPAEFMANFLVHA 1036



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 51/198 (25%)

Query: 500  SNLKRFPEISCNIEDLDLKE------------------------TAIEELPSSIGN---- 531
            + LK F  IS +I ++DL +                          +E LP+ I N    
Sbjct: 811  TTLKHFSLISTSIREIDLADYHQQHQTSDGLLLPRFQNLFLAGNRQLEVLPNGIWNMISE 870

Query: 532  -------------------LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
                               ++ L  L++  C  L S+ + + NL+SLR L LS    ++ 
Sbjct: 871  DLLIGRSPLIESLPEISEPMNTLTSLEVFYCRSLTSIPTSISNLRSLRSLRLSKT-GIKS 929

Query: 573  LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
            LP  I  L  L  ++L   K  E IP+S+  LS L    +  CK + SLPELP    +++
Sbjct: 930  LPSSIHELRQLYSIDLRNCKSLESIPNSIHNLSSLVTFSMSGCKIIISLPELPPNLKTLN 989

Query: 631  ARHCTSLKTL-SNSSTLL 647
               C SL+ L SN+  LL
Sbjct: 990  VSGCKSLQALPSNTCKLL 1007


>gi|357500591|ref|XP_003620584.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495599|gb|AES76802.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1392

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 225/682 (32%), Positives = 351/682 (51%), Gaps = 89/682 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R+NF   L  AL  + I  F DD  L +G  I P L  AIEGS++ + 
Sbjct: 20  YDVFVTFRGEDTRNNFTDFLFDALQTKGIIVFSDDTNLPKGESIGPELLRAIEGSQVFVA 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL------------ 122
           +FS  YASS WCL EL KI E     G+ V+PVFY VDPS+      +            
Sbjct: 80  VFSINYASSTWCLQELEKICECVKGSGKHVLPVFYDVDPSEVRKQSGIYGEAFMKHEQRF 139

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK--- 158
                                GW  + D P +      G +  I +K+       +    
Sbjct: 140 QQEHQKVSKWRDALKQVGSISGW-DLRDKPQA------GEIKKIVQKIMSTLECKSSCVS 192

Query: 159 DQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
             LV ++S ++ +++  L    +    +GIWG+GGIGKTT+A  +Y  I   F+ S F+ 
Sbjct: 193 KDLVAIDSRLEALQNHFLLDMVDGVRAIGIWGMGGIGKTTLAMNLYGQICHRFDASCFID 252

Query: 218 NIR----------DESEKVG----GLANIHL-------NFERRRLSRMKVLIVFYDLTDL 256
           ++           D  +++     G+ +  +       +  R RLSR K L++  ++  +
Sbjct: 253 DVSKIFRLHDGPIDAQKQILHQTLGIEHHQICNHYSATDLIRNRLSREKTLLILDNVDQV 312

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           +Q++ +    +    GSR++I +RD  +LK +    V  V++V  L++ ++  LF R AF
Sbjct: 313 EQLERIGVHREWLGAGSRIVIISRDEHILKEYG---VDVVYKVPLLNWAEAHKLFCRKAF 369

Query: 317 -GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
             +    + +  L+N +++YANG+PLA++VLGSYL G +  EW+S +  L+  P  D+  
Sbjct: 370 KAEKIIMSNYKNLANEILRYANGLPLAIKVLGSYLFGRNVTEWKSTLASLRESPDNDVMD 429

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
           VL++S+DGL + E+ IFLD ACF    ++  V N L+ C F A IG+S L+ KSL++ISN
Sbjct: 430 VLQLSFDGLKEMEKEIFLDIACFSTFRNEKYVKNILNCCGFHADIGLSVLIAKSLISISN 489

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT-GINLD--SLK 492
           ++I MH LLQE+G +IV+  S K+P K SRLW  +  Y V  EN       I LD   + 
Sbjct: 490 SRIIMHSLLQELGRKIVQNSSCKEPRKWSRLWSAKQFYNVKMENMEKQVKAIVLDDEEVD 549

Query: 493 ELYLGGCSNLK----RF-------PE-ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
              L   SNL+    R+       P  +S  +  ++  E   + LPSS  + + LV+L L
Sbjct: 550 VEQLSKMSNLRLLIIRYGMYISGSPSCLSNKLRYVEWDEYPSKYLPSSF-HPNELVELIL 608

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSS 599
              S +  +      L +LR L+LS  ++LEK+  + G   +LE+LNL    +  ++  S
Sbjct: 609 VK-SNITQLWKNKKYLPNLRTLDLSHSIELEKII-DFGEFPNLEWLNLEGCTNLVELDPS 666

Query: 600 MKQLSKLSDLRLQNCKRLQSLP 621
           +  L  L  L L+NC  L S+P
Sbjct: 667 IGLLRNLVYLNLENCYNLVSIP 688



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 6/93 (6%)

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           T+ S L S+ S  C    LR +++S C  L ++P  I  L  LE LNL   DF  +PS +
Sbjct: 754 THTSLLPSLRSLHC----LRNVDISFCY-LRQVPGTIECLHWLERLNLGGNDFVTLPS-L 807

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH 633
           ++LSKL  L L++C+ L+SLP+LP  +SI   H
Sbjct: 808 RKLSKLVYLNLEHCRLLESLPQLPSPTSIGRDH 840



 Score = 42.4 bits (98), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE-TAIEELPSSI 529
           +I Q+      LP    LD    + L    +   FP    N+E L+L+  T + EL  SI
Sbjct: 612 NITQLWKNKKYLPNLRTLDLSHSIELEKIIDFGEFP----NLEWLNLEGCTNLVELDPSI 667

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           G L  LV L+L NC  L S+ + +  L SL  LN+S C K+   P
Sbjct: 668 GLLRNLVYLNLENCYNLVSIPNTIFGLGSLEDLNISCCSKVFNKP 712


>gi|13517474|gb|AAK28809.1|AF310962_1 resistance-like protein P3-B [Linum usitatissimum]
          Length = 1188

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 178/523 (34%), Positives = 284/523 (54%), Gaps = 56/523 (10%)

Query: 4   SSSSINMIPHP---KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           SSS+    P+    ++DVFL FRG D R  F SHL +AL  +KI  FID+KL +   I  
Sbjct: 6   SSSAPRTSPYTGEWEYDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESID- 64

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----A 116
            L S ++   +S+V+FSE +A S WCL E+V I E   K G  V+PVFY VDPSD    +
Sbjct: 65  ELISILQRCPLSVVVFSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKS 124

Query: 117 GYCPSLGWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  WM                   ES LI+  V  + K+L D+ PS N++ LV + 
Sbjct: 125 HRTGPKRWMDALKAVAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMG 184

Query: 166 SIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG--SYFMQNIRDE 222
           S I E+E  L +    +   +G+WG+GG+GKTT+A A Y  ++S  +G    F++N+ + 
Sbjct: 185 SRIFEVERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEM 244

Query: 223 SEKVGGLANI-------------------HLNFERRRLSRMKVLIVFYDLTDLKQID-LL 262
            EK  G+  I                   ++ + R RLSR++V +V  ++  L+Q++ L 
Sbjct: 245 CEKHHGVDKIVHKLYSKLLDENNIDREDLNIAYRRERLSRLRVFVVLDNVETLEQLEKLA 304

Query: 263 IGRL----DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           +G +      F  GSR+IITTR+ ++L+N     +  ++ V+ L+  +S+ LFS +AF Q
Sbjct: 305 LGYVFNLSKVFAAGSRIIITTRNKKVLQN----AMAKIYNVECLNDEESIRLFSLHAFKQ 360

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
           + P   ++  S +   Y  G PLAL++LG  L       W+S +  L++  ++ ++ +L+
Sbjct: 361 DRPQDNWMGKSCLATSYCKGNPLALKILGGALFDEDVHYWKSLLTGLRQSGNLGMETILR 420

Query: 379 VSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI----S 434
            SYD L  EE+ IF+D AC   G  +  +++++     S+ + +  L+ KSL+T     +
Sbjct: 421 RSYDKLGKEEKKIFMDVACLLYGMSRSRLIDYMATMYSSSYVKVKDLIDKSLLTCVPSEN 480

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
              I +HDLL+EM   IV++E     GKRSRL  P+D++++L+
Sbjct: 481 GEMIEVHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLS 521



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 4/137 (2%)

Query: 522  IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
            IE LP     ++ L  L +  C  L S+ + + NL+SL  L LS    ++ LP  I  L 
Sbjct: 870  IESLPEISEPMNTLTSLRVCCCRSLTSIPTSISNLRSLGSLCLSKT-GIKSLPSSIQELR 928

Query: 582  SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
             L  + L   +  E IP+S+ +LSKL    +  C+ + SLPELP     +    C SL+ 
Sbjct: 929  QLHMIELRYCESLESIPNSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSGCKSLQA 988

Query: 640  L-SNSSTLLTRSSKHWD 655
            L SN+  LL  ++ H++
Sbjct: 989  LPSNTCKLLYLNTIHFE 1005



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 7/149 (4%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            +++L  L +  C +L   P    N+  L    L +T I+ LPSSI  L +L  ++L  C 
Sbjct: 880  MNTLTSLRVCCCRSLTSIPTSISNLRSLGSLCLSKTGIKSLPSSIQELRQLHMIELRYCE 939

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+S+ + +  L  L   ++SGC  +  LPE   NL+ L+      K  + +PS+  +L 
Sbjct: 940  SLESIPNSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSGC--KSLQALPSNTCKLL 997

Query: 605  KLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
             L+ +  + C +L Q++P E      +HA
Sbjct: 998  YLNTIHFEGCPQLDQAIPAEFVANFLVHA 1026



 Score = 39.3 bits (90), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 27/153 (17%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDL-KETAIEELPSSIGNLSR 534
           E    P  +NL  L   Y   C+NL   P+IS   NIE+L L    ++ E+P  +  L++
Sbjct: 669 EGYDQPQLVNLIVLDLCY---CANLIAIPDISSSLNIEELLLFGCKSLVEVPFHVQYLTK 725

Query: 535 LVDLDLTNCSGLKSVSSRL--------------------CNLKSLRRLNLSGCLKLEKLP 574
           LV LD++ C  LK +  +L                     + + L   +LSG   L +LP
Sbjct: 726 LVTLDISYCENLKPLPPKLDSKLLKHVRMKYLEITLCPEIDSRELEEFDLSGT-SLGELP 784

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
             I N++    L L  K+  K P     L + +
Sbjct: 785 SAIYNVKQNGVLYLHGKNITKFPPITTTLKRFT 817


>gi|297799836|ref|XP_002867802.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313638|gb|EFH44061.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 576

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 192/543 (35%), Positives = 285/543 (52%), Gaps = 64/543 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           KHDVF SFRG DVR +F+SH+     R+ I  FID+++ RG  I P L  AI GSKI+I+
Sbjct: 48  KHDVFPSFRGVDVRRDFLSHIQKEFQRKGITPFIDNEIKRGESIGPELIHAIRGSKIAII 107

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----------------AG- 117
           + S  YASS+WCL+ELV+I++ + + GQ V+ +FY VDP D                AG 
Sbjct: 108 LLSRNYASSKWCLDELVEIMKCREELGQSVMVIFYKVDPYDVKTLAGEFGKVFSKTCAGN 167

Query: 118 -------YCPSLGWMGIFDIPTS-----ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  +  +LG +       S     E+ +IE    D+S +L    PS + D  VG++
Sbjct: 168 TKEDIKRWRQALGKVATIAGYHSSNWDNEAAMIERLAIDVSNELISSAPSSDFDGFVGMK 227

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI-RDESE 224
           + ++ IE  L   S E   +GI G  GIGK+TIA  I+S  S  FE S FM+NI R    
Sbjct: 228 AHLENIEPFLRLDSDEVKMIGICGPSGIGKSTIARFIFSKYSHEFELSVFMENIKRRYPR 287

Query: 225 KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQL 284
                 ++ L  ++  LS++           + Q D+ I  L G    SR+IITT+D +L
Sbjct: 288 PCYDEYSMKLQLQKEFLSQI-----------MNQEDIKIHHL-GVAKDSRIIITTQDKRL 335

Query: 285 LKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQ 344
           L  H    + H++EV      ++L +F   AFGQ  P  GF  L+  V K +  +PL L+
Sbjct: 336 LNAHG---INHIYEVGYSPEEEALQIFCMYAFGQMSPYDGFENLAWEVTKLSGKLPLGLR 392

Query: 345 VLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGN-- 402
           V+GSY +GMS+ EWE  + +L+      I+ +LK SYD L +E++++ L  A F      
Sbjct: 393 VMGSYFRGMSKHEWEKELPRLRTRLDGKIESILKFSYDALREEDKDLVLCIAWFINNEWI 452

Query: 403 ---DQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKD 459
              +++L  NF++  +     G+  L  KSL++IS   I MH+L+  +G +IVR+ESI +
Sbjct: 453 EKVEEHLPKNFVEVSQ-----GLHVLAEKSLMSISFGYIWMHNLVARLGRKIVRKESIHE 507

Query: 460 PGKRSRLWHPEDIYQVLNENTSLPTGINLD----SLKELYLGGCS---NLKRFPEISCNI 512
           PG    L    +  QVLN  T     + L+    + +E  L  CS   + +RFP  +  I
Sbjct: 508 PG--HVLVDVGETCQVLNNGTMTTHQVFLEICPQNQQEYLLSACSGQRHCERFPPSTLQI 565

Query: 513 EDL 515
             L
Sbjct: 566 PSL 568


>gi|357500587|ref|XP_003620582.1| Elongation factor Ts [Medicago truncatula]
 gi|355495597|gb|AES76800.1| Elongation factor Ts [Medicago truncatula]
          Length = 1245

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 235/700 (33%), Positives = 360/700 (51%), Gaps = 90/700 (12%)

Query: 1   MASSSSSINMIPHPK----HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRG 55
           MAS+S+S +++        +DVF++FRG+D R+NF   L  AL  + I  F DD  L +G
Sbjct: 1   MASTSNSSSVLGTSSRRNYYDVFVTFRGEDTRNNFTDFLFDALQTKGIIVFSDDTNLPKG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
             I P L  AIEGS++ + +FS  YASS WCL EL KI E     G+ V+PVFY VDPSD
Sbjct: 61  ESIGPELLRAIEGSQVFVAVFSINYASSTWCLQELEKICECVKGSGKHVLPVFYDVDPSD 120

Query: 116 AGYCPSL---------------------------------GWMGIFDIPTS-ESVLIEGN 141
                 +                                 GW  + D P + E   I   
Sbjct: 121 VRKQSGIYGEAFIKHEQRFQQEFQKVSKWRDALKQVGSISGW-DLRDKPQAGEIKKIVQT 179

Query: 142 VNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIAS 200
           + +I K  S  F  D    LVG++S +  +++ LL  S +    +GI G+GGIGKTT+A 
Sbjct: 180 ILNILKYKSSCFSKD----LVGIDSRLDGLQNHLLLDSVDSVRAIGICGMGGIGKTTLAM 235

Query: 201 AIYSNISSHFEGSYFMQNIRD---------ESEKVGGLANIHL------------NFERR 239
           A+Y  IS  F  S F+ ++           +++K   L  + +            N  R 
Sbjct: 236 ALYDQISHRFSASCFIDDVSKIYKLHDGPLDAQKQILLQTLGIEHHQICNHYSVTNLIRS 295

Query: 240 RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEV 299
           RL R +VL++  ++  + Q++ +    +    GSR+II +RD  +LK +    V  V++V
Sbjct: 296 RLCRERVLLILDNVDQVAQLEKIGVHREWLGAGSRIIIISRDEHILKYYG---VDAVYKV 352

Query: 300 KELSYNDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEW 358
             L++ DS  LF + AF  +    + +  L+  ++ YANG+PLA+ VLGS+L G +  EW
Sbjct: 353 PLLNWTDSHKLFCQKAFKFEKVIMSNYENLAYEILDYANGLPLAIIVLGSFLFGRNVTEW 412

Query: 359 ESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA 418
           +SA+ +L+  P+ DI  VL++S+DGL+  E+ IFL  ACFF  + +  V N L+ C F A
Sbjct: 413 KSALARLRESPNNDIMDVLQLSFDGLEHTEKEIFLHIACFFSYSSKEYVKNILNCCGFHA 472

Query: 419 KIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
            IG+S L  KSL+++  + I MH LL+E+G +IV++ S K+  K SR+W  + +  V  E
Sbjct: 473 DIGLSVLNDKSLISLGESTIIMHSLLEELGRKIVQENSSKERRKWSRVWSEKQLNNVTME 532

Query: 479 NTSLPT-GINLDSLKEL---YLGGCSNLK------------RFPEISCNIEDLDLKETAI 522
                   I L S +E+   +L   SNL+                +S  +  ++      
Sbjct: 533 KMEKHVEAIELWSYEEVVVEHLAKMSNLRLLIIKCGRNIPGSLSSLSNALRYVEWDGYPF 592

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
           + LP+S  + + L++L L N S +K +      L +LRRL LS   KL K+  + G   +
Sbjct: 593 KCLPTSF-HPNDLIELILMN-SDIKQLWKNKKYLPNLRRLGLSYSRKLLKIV-DFGEFPN 649

Query: 583 LEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           LE+LNL   K+  ++  S+  L KL  L L+NCK L S+P
Sbjct: 650 LEWLNLEGCKNLVELDPSIGLLRKLVYLNLKNCKNLVSIP 689



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           SLR +++S C  L ++P+ I  L  LE L+L   +F  +PS +++LSKL  L L++CK L
Sbjct: 758 SLRSIDISFC-HLRQVPDAIECLHWLERLDLGGNNFVTLPS-LRKLSKLVYLNLEHCKLL 815

Query: 618 QSLPELP 624
           +SLP LP
Sbjct: 816 ESLPRLP 822



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 5/105 (4%)

Query: 471 DIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSI 529
           DI Q+      LP   NL  L   Y      +  F E   N+E L+L+    + EL  SI
Sbjct: 613 DIKQLWKNKKYLP---NLRRLGLSYSRKLLKIVDFGEFP-NLEWLNLEGCKNLVELDPSI 668

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           G L +LV L+L NC  L S+ + + +L SL  LN+ GC K+   P
Sbjct: 669 GLLRKLVYLNLKNCKNLVSIPNNIFDLCSLEDLNMRGCSKVFNNP 713


>gi|13517464|gb|AAK28803.1|AF310958_1 resistance-like protein P1-A [Linum usitatissimum]
          Length = 1200

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 174/509 (34%), Positives = 278/509 (54%), Gaps = 53/509 (10%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVFL FRG D R  F SHL +AL  +KI  FID+KL +   I   L S ++   +S+V
Sbjct: 22  EYDVFLCFRGDDTRDGFTSHLLSALSDKKIRAFIDEKLEKTESID-ELISILQRCPLSVV 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD----AGYCPSLGWMGIFDI 130
           +FSE +A S WCL E+V I E   K G  V+PVFY VDPSD    +       WM     
Sbjct: 81  VFSERFADSIWCLEEVVTIAERMEKVGHRVLPVFYKVDPSDVKDKSHRTGPKRWMDALKA 140

Query: 131 PTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSG 178
                         ES LI+  V  + K+L D+ PS N++ LV + S I E+E  L +  
Sbjct: 141 VAKCAGHTSQAIKIESELIKAVVETVQKQLIDMSPSINRNNLVAMGSRIFEVERLLAMDK 200

Query: 179 STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG--SYFMQNIRDESEKVGGLANI---- 232
             +   +G+WG+GG+GKTT+A A Y  ++S  +G    F++N+ +  EK  G+  I    
Sbjct: 201 LDDTCIIGLWGMGGVGKTTLAEACYDRVTSSNKGIKHLFIRNVNEMCEKHHGVDKIVHKL 260

Query: 233 ---------------HLNFERRRLSRMKVLIVFYDLTDLKQID-LLIGRL----DGFVPG 272
                          ++ + R RLSR++V +V  ++  L+Q++ L +G +      F  G
Sbjct: 261 YSKLLDENNIDREDLNIAYRRERLSRLRVFVVLDNVETLEQLEKLALGYVFNLSKVFAAG 320

Query: 273 SRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIV 332
           SR+IITTR+ ++L+N     +  ++ V+ L+  +S+ LFS +AF Q+ P   ++  S + 
Sbjct: 321 SRIIITTRNKKVLQN----AMAKIYNVECLNDKESIRLFSLHAFKQDRPQDNWMGKSRLA 376

Query: 333 IKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIF 392
             Y  G PLAL++LG  L       W+S +  L++  ++ ++ +L+ SYD L  EE+ IF
Sbjct: 377 TSYCKGNPLALKILGGALFDEDVHYWKSLLTGLRQSGNLGMETILRRSYDKLGKEEKKIF 436

Query: 393 LDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI----SNNKITMHDLLQEMG 448
           +D AC   G  +  +++++     S+ + +  L+ KSL+T     +   I +HDLL+EM 
Sbjct: 437 MDVACLLYGMSRSRLIDYMATMYSSSYVKVKDLIDKSLLTCVPSENGEMIEVHDLLKEMA 496

Query: 449 GEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
             IV++E     GKRSRL  P+D++++L+
Sbjct: 497 WNIVKEEP--KLGKRSRLVDPDDVHKLLS 523



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 6/168 (3%)

Query: 485  GINLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSRLVDLDLT 541
            G+ L     L+L G   L+  P    N+    L   +   IE LP     ++ L  L++ 
Sbjct: 843  GLLLPRFHNLWLTGNRQLEVLPNSIWNMISEGLFICRSPLIESLPEISEPMNTLTSLEVV 902

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
            +C  L S+ + + NL+SLR L L     ++ LP  I  L  L  ++L + K  E IP+S+
Sbjct: 903  DCRSLTSIPTSISNLRSLRSLYLVET-GIKSLPSSIQELRQLYSIDLRDCKSLESIPNSI 961

Query: 601  KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
             +LSKL    +  C+ + SLPELP     +    C SL+ L +++  L
Sbjct: 962  HKLSKLVTFSMSGCESIPSLPELPPNLKELDVSRCKSLQALPSNTCKL 1009



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 26/155 (16%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
            TS+PT I NL SL+ LYL                      ET I+ LPSSI  L +L  +
Sbjct: 908  TSIPTSISNLRSLRSLYL---------------------VETGIKSLPSSIQELRQLYSI 946

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            DL +C  L+S+ + +  L  L   ++SGC  +  LPE   NL+ L+      K  + +PS
Sbjct: 947  DLRDCKSLESIPNSIHKLSKLVTFSMSGCESIPSLPELPPNLKELDVSRC--KSLQALPS 1004

Query: 599  SMKQLSKLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
            +  +L  L+ +  + C +L Q+ P EL     +HA
Sbjct: 1005 NTCKLWYLNRIYFEECPQLDQTSPAELMANFLVHA 1039



 Score = 38.9 bits (89), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 21/160 (13%)

Query: 465 RLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE---TA 521
           R W   D  Q+LN             L  L L  C+NL   P+IS ++   +L      +
Sbjct: 668 RCWEGYDQPQLLN-------------LIVLDLRYCANLIAIPDISSSLNLEELLLFGCRS 714

Query: 522 IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
           + E+PS +  L++LV LD+++C  LK +  +L + K L+ + + G L + + P EI + E
Sbjct: 715 LVEVPSDVQYLTKLVTLDISHCKNLKPLPPKL-DSKLLKHVRMQG-LGITRCP-EIDSRE 771

Query: 582 SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            LE   L+     ++PS++  + +   LRL   K +   P
Sbjct: 772 -LEEFGLSGTSLGELPSAIYNVKQNGVLRLHG-KNITKFP 809


>gi|42573596|ref|NP_974894.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177586|dbj|BAB10817.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008007|gb|AED95390.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 858

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 205/577 (35%), Positives = 295/577 (51%), Gaps = 85/577 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSFRG DVR  F SH      R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSRNWL----YDVFLSFRGGDVRVTFRSHFLKEFDRKLITAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   I++PVFY VDPS   Y  
Sbjct: 57  DLEQAIKDSRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IIIPVFYGVDPSQVRY-- 111

Query: 121 SLGWMG-IFDIPTS------------------------------ESVLIEGNVNDISKKL 149
            +G  G IF+                                  E+ +IE   ND+ +KL
Sbjct: 112 QIGDFGRIFEKTCKRQTEEVKNQWKKALTLVANMLGFDSAKWDDEAKMIEEIANDVLRKL 171

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
             L  S + D  VG+E  I  + + L   S E   VGIWG  GIGKTTIA A+++N+  H
Sbjct: 172 L-LTTSKDFDDFVGLEDHIANMSALLDLESKEVKMVGIWGSSGIGKTTIARALFNNLFRH 230

Query: 210 FEGSYFM-QNIRDESEKVGGLAN-------IHLNFE-------------------RRRLS 242
           F+   F+ ++   +S ++   AN       +HL                        RL 
Sbjct: 231 FQVRKFIDRSFAYKSREIHSSANPDDHNMKLHLQESFLSEILRMPNIKIDDPTALEERLK 290

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             KVLI+  DL D+  +D L+G+   F  GSR+I+ T D   L  H    + H++EV   
Sbjct: 291 YQKVLIIIDDLDDIMVLDTLVGQTQWFGYGSRIIVVTNDKHFLTAH---GIDHIYEVSFP 347

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           +   +  +  ++AF QN+   GF +L   V+++A   PL L +LG YL+G +EE W   +
Sbjct: 348 TDVHACQMLCQSAFKQNYAPEGFGDLVVDVVRHACSFPLGLNLLGKYLRGRNEEYWMDIL 407

Query: 363 NKLKRMPHMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
            +L+    +D  I+K+L++SYDGLD E+Q IF   AC F       + + L     S   
Sbjct: 408 PRLENGLRLDGKIEKILRISYDGLDSEDQEIFRHIACIFIHMKVTTIKSLLAESDVS--F 465

Query: 421 GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            +  L  KSL+ +    + MH  LQEMG +IVR +SI +PG+R  L  P DI+ VLN  T
Sbjct: 466 ALENLADKSLIHVRQGYVVMHRSLQEMGRKIVRIQSIDNPGEREFLVDPNDIHDVLNACT 525

Query: 481 SLPT--GINLDS-------LKELYLGGCSNLKRFPEI 508
                 GI+L++       + E  + G SNL RF EI
Sbjct: 526 GTQKVLGISLNTRNIVELDVHESAIKGMSNL-RFLEI 561



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 11/101 (10%)

Query: 477 NENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           N   +LPTG NL SL  L    C+ LK FP+ S NI  L+L  T IEE PS + +L  LV
Sbjct: 749 NSLETLPTGFNLKSLDRLSFSECTKLKTFPKFSTNISVLNLFGTNIEEYPSHL-HLENLV 807

Query: 537 DL-------DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
           +        ++    G K  SS+   L  L +L    CL L
Sbjct: 808 EFSISKEESNMIQWEGAKVSSSK---LNILSKLFYYHCLYL 845



 Score = 42.0 bits (97), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 26/123 (21%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           + L  LKE+ L G  NLK  P++S                       + L  L+  NC  
Sbjct: 688 VPLTCLKEMDLDGSVNLKEIPDLSMA---------------------TNLETLNFENCKS 726

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----KDFEKIPSSMK 601
           L  + S + NL  L +LN++ C  LE LP    NL+SL+ L+ +E    K F K  +++ 
Sbjct: 727 LVELPSFIRNLNKLLKLNMAFCNSLETLPTGF-NLKSLDRLSFSECTKLKTFPKFSTNIS 785

Query: 602 QLS 604
            L+
Sbjct: 786 VLN 788



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 556 LKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
           L  L+ ++L G + L+++P+     NLE+L + N   K   ++PS ++ L+KL  L +  
Sbjct: 690 LTCLKEMDLDGSVNLKEIPDLSMATNLETLNFENC--KSLVELPSFIRNLNKLLKLNMAF 747

Query: 614 CKRLQSLP---ELPCGSSIHARHCTSLKTLSNSST 645
           C  L++LP    L     +    CT LKT    ST
Sbjct: 748 CNSLETLPTGFNLKSLDRLSFSECTKLKTFPKFST 782


>gi|351727669|ref|NP_001235633.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
 gi|223452586|gb|ACM89620.1| TIR-NBS-LRR type disease resistance protein [Glycine max]
          Length = 711

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 177/444 (39%), Positives = 247/444 (55%), Gaps = 65/444 (14%)

Query: 93  ILESKNKYGQIVVPVFYLVDPSD-----------------------------------AG 117
           ++E   +  QI+VPVF+ VDPSD                                   A 
Sbjct: 1   MIECLERNKQILVPVFFNVDPSDVRQQHGEYGDALAKHEEKLKENMFKVQSWRSALKKAA 60

Query: 118 YCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLS 177
                 + G FD    ES L++  V DIS+KLS   PS++ + LVG +  I +I+S LL 
Sbjct: 61  NLSGFHYPGNFD---DESDLVDKIVEDISEKLSKSSPSES-NGLVGNDQNIVQIQSLLLK 116

Query: 178 GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG---------- 227
            S E   VGIWG+GGIGKTTIA A+Y   S  +EG  F+ N+R+E E+ G          
Sbjct: 117 ESNEVIFVGIWGMGGIGKTTIAHAMYDKYSPQYEGCCFL-NVREEVEQRGLSHLQEKLIS 175

Query: 228 ------GLANIHLNFER------RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
                 GL     +  R      R++ R KVL+V  D+   +Q+  L+G+   F PGSRV
Sbjct: 176 ELLEGEGLHTSGTSKARFFDSAGRKMGRKKVLVVLDDVNTSEQLKYLVGKPICFGPGSRV 235

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           +IT+RD ++L +     V  + +VKE+   DSL LF  NAF ++HP  G+ +LS  V+K 
Sbjct: 236 LITSRDKRVLTS---GGVYQIHKVKEMDPRDSLKLFCLNAFNESHPKMGYEKLSEEVVKI 292

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
           A G PLAL+VLG+     S + WE A++K+K+ P+ +IQ VL+ SYDGL + E+  FLD 
Sbjct: 293 AQGNPLALKVLGADFHSRSMDTWECALSKIKKYPNEEIQSVLRFSYDGLHEVEKKAFLDI 352

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQE 455
           A FF+ +D+  V   LDA  F    G+  L  K+L+TIS+N+I MHDL++EMG EIVRQE
Sbjct: 353 AFFFEEDDKDYVTRKLDAWGFHGASGVEVLQQKALITISDNRIQMHDLIREMGCEIVRQE 412

Query: 456 SIKDPGKRSRLWHPEDIYQVLNEN 479
           SI  P +RSRL   E++  VL +N
Sbjct: 413 SIICPRRRSRLRDNEEVSNVLRQN 436


>gi|147841246|emb|CAN75617.1| hypothetical protein VITISV_010165 [Vitis vinifera]
          Length = 608

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 196/524 (37%), Positives = 285/524 (54%), Gaps = 81/524 (15%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPS 61
           +SSSS  + P   ++VFLSFRG+D R NF  HL AAL R+ I TF DD+ L+RG EI+PS
Sbjct: 9   ASSSSTPVRPW-DYEVFLSFRGEDTRRNFTGHLYAALIRKGIVTFRDDEGLSRGEEIAPS 67

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----A 116
           L +AIE S+ ++VI SE YA SRWCL EL KI+E + + G IV PVFY VDPS       
Sbjct: 68  LLTAIEKSRCALVILSEHYADSRWCLEELAKIMEWRAEMGLIVYPVFYHVDPSHVRHQRG 127

Query: 117 GYCPSLG-------------WMGIFDIPTSESVLIEGN------VNDISKKLSDLFPSDN 157
            Y  +L              W        + S     N      VNDI++ +   F   +
Sbjct: 128 HYGEALADHERNGSGHQTQRWRAALTEVANLSGWHAENGSESEVVNDITRTILARFTRKH 187

Query: 158 ---KDQLVGVESIIKEIESQLLS-GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
                 LVG++  + E+  Q++   S E   +GI+G+GGIGKTT+A  +Y+ I+  F  +
Sbjct: 188 LHVDKNLVGMDDRLNEVIPQMIDLSSNEVRMIGIYGLGGIGKTTVAKVVYNRIAPLFMIT 247

Query: 214 YFMQNIRDESEKVGG------------------LANIH--LNFERRRLSRMKVLIVFYDL 253
            F+ N+R++S+  G                   ++N+   ++  + RL    VL++  D+
Sbjct: 248 SFIANVREDSKSRGLLHLQKQLLHEILPSRKNFISNVDEGIHMIQDRLCFKSVLLILDDV 307

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             L Q++ L G  + F PGSR+I+ TRD  LL  H+   +   +EVK+L   +++ LFS+
Sbjct: 308 DTLDQLEGLAGDCNWFGPGSRIIVXTRDRHLLDVHK---MDAFYEVKKLDQMEAIELFSQ 364

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
           +AF Q HP   +  LSN +++  +G+PL L+VLG +L G +  EW+S + KLK+      
Sbjct: 365 HAFEQKHPKEDYETLSNSMVRCVDGLPLGLKVLGRFLFGKTILEWKSELQKLKQ------ 418

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
                               D    FK  D+  V   LDAC FSA+IGI  L  K L+ I
Sbjct: 419 --------------------DLTKKFKDKDR--VTRILDACNFSAEIGIGVLSDKCLIDI 456

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
            +NKI+MH LLQ+MG +IVRQ+  +DP K SRL +P+ + +VL 
Sbjct: 457 FDNKISMHALLQQMGRDIVRQKYPEDPEKWSRLCYPKVVNRVLT 500


>gi|449447739|ref|XP_004141625.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 505

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 179/505 (35%), Positives = 264/505 (52%), Gaps = 70/505 (13%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETF---IDDKLNRGNEISPS 61
           S S+ + P  ++DVFLS R KD   +F + L+ AL  + I  F   IDD+      +   
Sbjct: 22  SISLPLPPLRRYDVFLSHRVKDTGSSFAADLHEALTNQGIVVFRDGIDDEDAEQPYVEEK 81

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS 121
           +  A+E S+ SIV+FSE Y S   C+ E+ KI+  K    Q+V+P+FY +DP        
Sbjct: 82  MK-AVEESRSSIVVFSENYGSFV-CMKEVGKIVTCKELMDQLVLPIFYKIDP-------- 131

Query: 122 LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI------IKEI---- 171
                             GNV          F     +  + +E +      + ++    
Sbjct: 132 ------------------GNVRKQEGNFKKYFNDHEANPKIDIEEVENWRYSMNQVGHLS 173

Query: 172 -----ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK- 225
                +SQL      F  VGIWG+GGIGKTTIA  IY ++S  F+G YF+ N+++  +K 
Sbjct: 174 GWHVQDSQLSLDDVRF--VGIWGMGGIGKTTIARIIYKSVSHLFDGCYFLDNVKEALKKE 231

Query: 226 ----------VGGLANIHLNFE--------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
                      G L   +++          +RR+S +K LI+  D+  L Q+  L G LD
Sbjct: 232 DIASLQQKLLTGTLMKRNIDIPNADGATLIKRRISNIKALIILDDVNHLSQLQKLAGGLD 291

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F  GSRVI+TTRD  LL +H   R    + V+ L   + L LFS+ AFG+ H    + +
Sbjct: 292 WFGSGSRVIVTTRDEHLLISHGIERR---YNVEVLKIEEGLQLFSQKAFGEEHTKEEYFD 348

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           + + V+ YA G+PLA++VLGS L+    E+W +AV KL  +   +I + LK+SY  L+  
Sbjct: 349 VCSQVVDYAGGLPLAIEVLGSSLRNKPMEDWINAVEKLWEVRDKEIIEKLKISYYMLEKS 408

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           EQ IFLD ACFFK   +   +  L++  F A +G+  L  K L+T  ++K+ MHDL+QEM
Sbjct: 409 EQKIFLDIACFFKRKSKKQAIEILESFGFPAVLGLEILEEKCLITTPHDKLHMHDLIQEM 468

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDI 472
           G EIVRQ  + +P KR+RLW  ED+
Sbjct: 469 GQEIVRQNFLNEPEKRTRLWLREDV 493


>gi|1842251|gb|AAB47618.1| rust resistance protein M [Linum usitatissimum]
          Length = 1305

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 215/722 (29%), Positives = 350/722 (48%), Gaps = 111/722 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           ++ S++     P  ++DVFLSFRG D R+     L   LCR KI TF DD +L++G EI 
Sbjct: 61  ISDSTNPSASFPSVEYDVFLSFRGPDTRYQITDILYRFLCRSKIHTFKDDDELHKGEEIK 120

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGY 118
            +L  AI+ SKI + I S GYA S+WCL EL KI+   K    QI++P+FY+VDP D  +
Sbjct: 121 VNLLRAIDQSKIYVPIISRGYADSKWCLMELAKIVRHQKLDTRQIIIPIFYMVDPKDVRH 180

Query: 119 CP---------------------------SLGWMGIFDIPTSESVLIEGNVND-ISKKLS 150
                                         +G +  + +  ++    +G + D +S  + 
Sbjct: 181 QTGPYRKAFQKHSTRYDEMTIRSWKNALNEVGALKGWHVKNNDE---QGAIADEVSANIW 237

Query: 151 DLFPSDN----KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
                +N     D+LVG++  ++ I   L   S     VG++G+GGIGKTT A A+Y+ I
Sbjct: 238 SHISKENFILETDELVGIDDHVEVILEMLSLDSKSVTMVGLYGMGGIGKTTTAKAVYNKI 297

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIH------------LNFE---------RRRLSRMK 245
           SSHF+   F+ N+R   E+  G+  +             + F          + R+S+ K
Sbjct: 298 SSHFDRCCFVDNVRAMQEQKDGIFILQKKLVSEILRMDSVGFTNDSGGRKMIKERVSKSK 357

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           +L+V  D+ +  + + ++G    F  G+R IIT+R+  +L     ++   ++EV  +S  
Sbjct: 358 ILVVLDDVDEKFKFEDILGCPKDFDSGTRFIITSRNQNVLSRLNENQC-KLYEVGSMSEQ 416

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
            SL LFS++AF +N P + +  L+N ++    G+PL L+V GS+L       WE  + +L
Sbjct: 417 HSLELFSKHAFKKNTPPSDYETLANDIVSTTGGLPLTLKVTGSFLFRQEIGVWEDTLEQL 476

Query: 366 KRMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           ++   +D +   LK+SYD L  E + IFLD ACFF G ++ +       C+F  K  I  
Sbjct: 477 RKTLDLDEVYDRLKISYDALKAEAKEIFLDIACFFIGRNKEMPYYMWSECKFYPKSNIIF 536

Query: 425 LVGKSLVTISNNKI-TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED-IYQVLNEN--- 479
           L+ + ++ + ++ +  MHD L++MG EIVR+E ++ P KRSR+W  E+ I  +LN+    
Sbjct: 537 LIQRCMIQVGDDGVLEMHDQLRDMGREIVRREDVQRPWKRSRIWSREEGIDLLLNKKGSS 596

Query: 480 ----TSLPTG------------------INLDSLKELYLGGCSNLK-RFPEISCNIEDLD 516
                S+P                    +NL  L+  ++G  + L   F  +  N++ LD
Sbjct: 597 QVKAISIPNNMLYAWESGVKYEFKSECFLNLSELRLFFVGSTTLLTGDFNNLLPNLKWLD 656

Query: 517 LKETA--IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRL--------NLSG 566
           L   A  + + P +   + +LV L  TN     S   ++     + RL         LS 
Sbjct: 657 LPRYAHGLYDPPVTNFTMKKLVILVSTNSKTEWSHMIKMAPRLKVVRLYSDYGVSQRLSF 716

Query: 567 CLKLEKLPE------------EIGNLESLEYLNLAEKDFEKIP-SSMKQLSKLSDLRLQN 613
           C +  K  E            +IG L++L+ L+L     +KI   +   L  L +LRL +
Sbjct: 717 CWRFPKSIEVLSMSGIEIKEVDIGELKNLKTLDLTSCRIQKISGGTFGMLKGLIELRLDS 776

Query: 614 CK 615
            K
Sbjct: 777 IK 778


>gi|13517477|gb|AAK28810.1|AF310964_1 resistance-like protein P4-B [Linum usitatissimum]
          Length = 1202

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 183/540 (33%), Positives = 292/540 (54%), Gaps = 75/540 (13%)

Query: 4   SSSSINMIPHP---KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           SSS+    P+    ++DVFL FRG D RH F SHL +AL  ++I TFID KL +   I  
Sbjct: 6   SSSAPRTSPYTGEWEYDVFLCFRG-DTRHGFTSHLLSALSDKQIRTFIDHKLAKTESID- 63

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L S ++   +S+V+FSE +A S WCL E+V I E   K G  V+PVFY VDP D     
Sbjct: 64  ELISILQRCALSVVVFSEKFADSVWCLEEVVTIAERMKKVGHRVLPVFYKVDPFDVTDES 123

Query: 117 -GYCPSLG---------------WMGIFDIPTS-----------ESVLIEGNVNDISKKL 149
             Y  ++                WM   +   +           ES LI+  V  + K+L
Sbjct: 124 RSYMATIDREYKARSSFLEDKKRWMDAVNAVANCAGHTSQAIKIESELIKAVVETVQKQL 183

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNT--VGIWGIGGIGKTTIASAIYSNIS 207
            D+ PS N++ LV + S I EIE +LL+     +T  +G+WG+GG+GKTT+A A Y  ++
Sbjct: 184 IDMSPSINRNNLVAMSSRIFEIE-RLLAMDKLDDTFIIGLWGMGGVGKTTLAEACYERVT 242

Query: 208 SHFEG--SYFMQNIRDESEKVGGLANI-------------------HLNFERRRLSRMKV 246
           S  +G    F++N+ +  EK  G+  I                   ++ + R+RLS ++V
Sbjct: 243 SSNKGIKHLFVRNVNEICEKHHGVEKIVHKLYSKLLDENNIDREDLNIAYRRQRLSHLRV 302

Query: 247 LIVFYDLTDLKQID-LLIGRL----DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
            +V  ++  L+Q++ L +G +      F  GSR+IITTR+ ++L+N     +  ++ V+ 
Sbjct: 303 FVVLDNVETLEQLEQLALGYVFNLSKVFAAGSRIIITTRNKKVLQN----AMAKIYNVEC 358

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
           L+  +S+ LFS +AF Q+ P   + + S++   Y  G PLAL++LG  L G     W S 
Sbjct: 359 LNDKESIRLFSLHAFKQDRPQDNWTDKSHLATSYCKGNPLALKILGGALFGEDVHYWRSL 418

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
           +  L++  ++ ++ +L+ SYD L  EE+ IFLD AC   G  +  +++++     S+ + 
Sbjct: 419 LTGLRQSGNLGMETILRRSYDKLGKEEKKIFLDVACLLNGMSKSRLIDYMATMYSSSYVK 478

Query: 422 ISRLVGKSLVTI----SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
           +  L+ KSL+T     +   I +HDLL+EM   IV++E     GKRSRL  P+D++++L+
Sbjct: 479 VKDLIDKSLLTCVPSENGEMIEVHDLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLS 536



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 9/144 (6%)

Query: 522  IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
            IE LP     ++ L  L +  C  L S+ + + NL+SL  L LS    ++ LP  I  L 
Sbjct: 884  IESLPEISEPMNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCLSET-GIKSLPSSIQELR 942

Query: 582  SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
             L +  L   +  E IP+S+ +LSKL  L +  C+ + SLPELP     +    C SL+ 
Sbjct: 943  QLHFFELRYCESLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKELDVSRCKSLQA 1002

Query: 640  L-SNSSTLLTRSSKHWDIFNFSNC 662
            L SN+  LL     + ++ +F  C
Sbjct: 1003 LPSNTCKLL-----YLNLIHFEGC 1021



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 7/149 (4%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            +++L  L++  C +L   P    N+  L    L ET I+ LPSSI  L +L   +L  C 
Sbjct: 894  MNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCLSETGIKSLPSSIQELRQLHFFELRYCE 953

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+S+ + +  L  L  L++SGC  +  LPE   NL+ L+      K  + +PS+  +L 
Sbjct: 954  SLESIPNSIHKLSKLVTLSMSGCEIIISLPELPPNLKELDVSRC--KSLQALPSNTCKLL 1011

Query: 605  KLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
             L+ +  + C +L Q++P E      +HA
Sbjct: 1012 YLNLIHFEGCPQLDQAIPAEFVANFLVHA 1040



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 27/153 (17%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEELPSSIGNLSR 534
           E    P  +NL  L   Y   C+NL   P+IS ++   +L   +  ++ E+PS +  L++
Sbjct: 684 EGYDQPQLVNLIVLDLCY---CANLITIPDISSSLNLEELLLLRCVSLVEVPSHVQYLTK 740

Query: 535 LVDLDLTNCSGLKSVSS----------RLCNL----------KSLRRLNLSGCLKLEKLP 574
           LV LD+++C  LK +            R+ NL          + L   +LSG   L +LP
Sbjct: 741 LVTLDISHCENLKPLPPKLDSKLLKHVRMKNLEITRCPEIDSRELEEFDLSGT-SLGELP 799

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
             I N++   YL+L  K+  K P     L + +
Sbjct: 800 SAIYNVKQNGYLHLHGKNITKFPGITTTLERFT 832


>gi|4588066|gb|AAD25974.1|AF093647_1 flax rust resistance protein [Linum usitatissimum]
          Length = 816

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 217/741 (29%), Positives = 353/741 (47%), Gaps = 121/741 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++     P  +++VFLSFRG D R  F   L   L R KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGSFPSVEYEVFLSFRGPDTREQFTDFLYQFLRRYKIHTFRDDDELRKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDL----------------------- 152
              C    +    +    E++    N  D  KK+ DL                       
Sbjct: 166 QTGCYKKAFRKHANKFEGETI---QNWKDALKKVGDLKGWHIGQNDKQGAIADEVSTDIW 222

Query: 153 --FPSDN----KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
                +N     D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ I
Sbjct: 223 SHISKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKI 282

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIH--------------LNFE---------RRRLSR 243
           SS F+   F+ NIR+  ++  G+  +               + F          + R+SR
Sbjct: 283 SSCFDRCCFIDNIRETQDQKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKMIKERVSR 342

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            K+L+V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV  +S
Sbjct: 343 FKILVVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGSMS 401

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
              SL LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       WE  + 
Sbjct: 402 KPRSLELFSKHAFKKNTPPSDYETLANDVVDTTAGLPLTLKVIGSLLFKQEIGVWEDTLE 461

Query: 364 KLKRMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           +L +  ++D +   LK+SYD L  E + IFLD ACFF G ++         C F     I
Sbjct: 462 QLCKTLNLDEVYDRLKISYDALKPEAKEIFLDIACFFIGKNKEEPYYMWTDCNFYPASNI 521

Query: 423 SRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN---- 477
           + L+ + ++ +  +++  MHD L++MG EIVR+E ++ P KRSR+W  E    +L     
Sbjct: 522 TFLIQRCMIQVGDDDEFEMHDQLRDMGREIVRREDVR-PWKRSRIWSREGGIDLLRNKKG 580

Query: 478 ----ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL- 532
               +  S+  G+  +   E +L              N+ +L     +   L     NL 
Sbjct: 581 SSKVKAISITWGVKYEFKSECFL--------------NLSELRYLHASSSMLTGDFNNLL 626

Query: 533 --SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL-----KLEKLP----------- 574
              + ++LD+  C  L  +   +  + SLRRL +          ++ LP           
Sbjct: 627 PNLKWLELDIGGCPDLTELVQTVVAVPSLRRLTIRDSWLEVGPMIQSLPNFPMLDELTLS 686

Query: 575 ---------EEIGNLESLEYLNLAEKD----FEKIPSSMKQLSKLSDL--RLQNCKRLQS 619
                    + IG+LE L  L L   D     E+I +S+ +L KL+ L   + + + ++ 
Sbjct: 687 MVIITEDDLDVIGSLEELVRLELVLDDTSSGIERI-ASLSKLQKLTTLIVEVPSLREIEG 745

Query: 620 LPELPCGSSIHARHCTSLKTL 640
           L EL     ++ + CTSL+ L
Sbjct: 746 LAELKSLQRLYLQGCTSLERL 766


>gi|356514972|ref|XP_003526175.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1158

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 217/709 (30%), Positives = 353/709 (49%), Gaps = 119/709 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SFRG+D R+NF + L  AL    I  F DD  L +G  I+P L  AI+GS++ +V
Sbjct: 23  YDVFVSFRGEDTRNNFTAFLFDALFENGIHAFKDDTHLQKGESIAPELLLAIQGSRLFVV 82

Query: 75  IFSEGYASSRWCLNELVKILESKNKYG-QIVVPVFYLVDPSDAGYCPSLGWMGI------ 127
           +FS+ YASS WCL EL  I     +     V+P+FY VDPS+       G+ GI      
Sbjct: 83  VFSKNYASSTWCLRELAHICNCTIEASPSRVLPIFYDVDPSEVR--KQSGYYGIAFAEHE 140

Query: 128 ----------------------------FDIPT-SESVLIEGNVNDISKKLSDLFPSDNK 158
                                       +DI   S+  +I+  V  I+  L   F +   
Sbjct: 141 ERFREDKVKMEEVQRWREALTQMANLSGWDIRNKSQPAMIKEIVQKINYILGPKFQNLPS 200

Query: 159 DQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE------ 211
             LVG+ES ++E+E  L L   T+   VGI G+GGIGKTT+A A+Y  I+  ++      
Sbjct: 201 GNLVGMESRVEELEKCLALESVTDVRVVGISGMGGIGKTTLALALYEKIAYQYDDVNKIY 260

Query: 212 ---GSYFMQN------IRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
              GS  +Q       + DE+ ++  ++         RL   + LIV  +++ ++Q+ + 
Sbjct: 261 QHYGSLGVQKQLLDQCLNDENLEICNVSR-GTYLIGTRLRNKRGLIVLDNVSQVEQLHMF 319

Query: 263 IGRLDGFVP-----GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
            G  +  +      GSR+II +RD  +L+ H    V HV+ V+ L+ ++++ LF  NAF 
Sbjct: 320 TGSRETLLRECLGGGSRIIIISRDEHILRTHG---VNHVYRVRPLNQDNAVQLFCNNAFK 376

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
            ++  + +  L++  + +A G PLA++V+G  L G+   +WE  + +L      +I  V+
Sbjct: 377 CDYIMSDYKMLTHDALWHAQGHPLAIKVIGKSLFGLDVSQWEGTLVRLSENKSKNIMDVI 436

Query: 378 KVSYDGLDDEEQNIFLDTACF-----FKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           ++SYD L+++++ IFLD ACF     F+ N    V   L+   F+++IG+  LV KSL+T
Sbjct: 437 RISYDALEEKDKEIFLDIACFSGQHYFEDN----VKEILNFRGFNSEIGLQILVDKSLIT 492

Query: 433 ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--------- 483
           IS  KI MHDLL+++G  IVR++S K+P K SRLW  ED+Y+ ++ N             
Sbjct: 493 ISYGKIYMHDLLRDLGKCIVREKSPKEPRKWSRLWDCEDLYKFMSSNKEAKNLEAIVVED 552

Query: 484 -------TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL---- 532
                  T +  D+L ++       L R+ E   +  + +    ++  L + +G L    
Sbjct: 553 EPGMFSETTMRFDALSKMKNLKLLILPRYYEKGLSTIEEEKFSGSLNYLSNELGYLIWHF 612

Query: 533 ------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
                         LV+L+L+  S ++ +      + +LRRLN+S C       + +  +
Sbjct: 613 YPFNFLPKCFQPHNLVELNLSG-SNIQHLWDSTQPIPNLRRLNVSDC-------DNLIEV 664

Query: 581 ESLEYLNLAEKDFE------KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +  E LNL E + +      +I  S+  L KL+ L L+ CK L +LP  
Sbjct: 665 QDFEDLNLEELNLQGCVQLRQIHPSIGHLKKLTHLNLKYCKSLVNLPHF 713



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 43/176 (24%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIE------ELPSSIGNLSRLVDLDLTNCS 544
           L  L L  C +L   P     + DL+LKE  +E      ++  SIG+L +L  L+L +C 
Sbjct: 743 LTHLNLKYCKSLVNLPHF---VGDLNLKELNLEGCVQLRQIHPSIGHLRKLTVLNLKDCK 799

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLE--------------------------------- 571
            L S  S +  L SL  L+L GC  L                                  
Sbjct: 800 SLISFPSNILGLSSLTYLSLFGCSNLHTIDLSEDSVRCLLPSYTIFSCMRQLDLSFCNLL 859

Query: 572 KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
           K+P+  GNL SLE L L   +FE +PS  +    L  L LQ+CKRL+ LPELP  +
Sbjct: 860 KIPDAFGNLHSLEKLCLRGNNFETLPSLEELSKLLL-LNLQHCKRLKYLPELPSAT 914



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 26/138 (18%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS-CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSG 545
           + +L+ L +  C NL    +    N+E+L+L+    + ++  SIG+L +L  L+L  C  
Sbjct: 647 IPNLRRLNVSDCDNLIEVQDFEDLNLEELNLQGCVQLRQIHPSIGHLKKLTHLNLKYCKS 706

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L ++   + +L +L  LNL GC++L ++   IG+ + L +LN                  
Sbjct: 707 LVNLPHFVEDL-NLEELNLQGCVQLRQIHPSIGHPKKLTHLN------------------ 747

Query: 606 LSDLRLQNCKRLQSLPEL 623
                L+ CK L +LP  
Sbjct: 748 -----LKYCKSLVNLPHF 760


>gi|224116202|ref|XP_002331986.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832110|gb|EEE70587.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1098

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 189/534 (35%), Positives = 290/534 (54%), Gaps = 50/534 (9%)

Query: 130 IPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWG 189
           I  +ES  I+  V  IS KLS   P+ +K+ LVG++S ++ +   +     E   +GI G
Sbjct: 6   ICRNESESIKIIVEYISYKLSITLPTISKN-LVGIDSRLEVLNGYIGEEVGEAIFIGICG 64

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH---------------- 233
           +GG+GKTT+A  +Y  I   FEGS F+ N+R+   +  G   +                 
Sbjct: 65  MGGLGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVCD 124

Query: 234 ----LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
               +   +RR  R K+L+V  D+ D KQ++ L      F PGSR+IIT+RD Q+L  + 
Sbjct: 125 SSRGIEMIKRRSQRKKILVVLDDVDDHKQLESLAAESKWFGPGSRIIITSRDKQVLTRNG 184

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              V  ++E ++L+ +D+L LFS+ AF  + PA  FL+LS  V+ YANG+PLAL+V+GS+
Sbjct: 185 ---VARIYEAEKLNDDDALMLFSQKAFENDQPAEDFLDLSKQVVGYANGLPLALEVIGSF 241

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           L G S  EW  A+N++  +P  +I KVL VS+DGL + E+ IFLD ACF KG     +  
Sbjct: 242 LHGRSIPEWRGAINRMNEIPDHEIIKVLLVSFDGLHELEKKIFLDIACFLKGFKIDRITR 301

Query: 410 FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
            LD   F A IGI  L+ +SL+++S +++ MH+LLQ+MG EI+R+ES ++PG+RSRLW  
Sbjct: 302 ILDGRGFHASIGIPVLIERSLISVSRDQVWMHNLLQKMGKEIIRRESPEEPGRRSRLWTY 361

Query: 470 EDIYQVLNENTSL----PTGINLDSLKELY--LGGCSNLKRFP-------EISCNIEDLD 516
           +D+   L +N          +++  +KE    +   S + R         ++S   EDL 
Sbjct: 362 KDVCLALMDNIGKEKIEAIFLDMPGIKEAQWNMEAFSKMSRLRLLKINNVQLSEGPEDLS 421

Query: 517 LKETAIE-------ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
            K   +E        LP+S+  +  LV+L + N S ++ +     +  +L+ +NLS  L 
Sbjct: 422 NKLRFLEWHSYPSKSLPASL-QVDELVELHMAN-SSIEQLWYGCKSAINLKIINLSNSLN 479

Query: 570 LEKLPEEIG--NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L K P   G  NLESL           ++  S+    KL  + L NCK ++ LP
Sbjct: 480 LSKTPNLTGIPNLESLILEGCT--SLSEVHPSLALHKKLQHVNLVNCKSIRILP 531



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 88/139 (63%), Gaps = 3/139 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SLK   L GCS L++FP+I  N+     L L ET+I +LPSSI +L  L  L
Sbjct: 530 LPNNLEMESLKVCTLDGCSKLEKFPDIIGNMNCLMVLRLDETSITKLPSSIHHLIGLGLL 589

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE  +++     ++P+
Sbjct: 590 SMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKCIPENLGKVESLEEFDVSGTLIRQLPA 649

Query: 599 SMKQLSKLSDLRLQNCKRL 617
           S+  L  L  L +  CKR+
Sbjct: 650 SIFLLKNLEVLSMDGCKRI 668



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 96/172 (55%), Gaps = 7/172 (4%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L GCS LK  PE    +E L   D+  T I +LP+SI  L  L 
Sbjct: 599 SIPSSIGCLKSLKKLDLSGCSELKCIPENLGKVESLEEFDVSGTLIRQLPASIFLLKNLE 658

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEK 595
            L +  C  +  +   L +L SL  L L  C L+   LPE+IG+L SL  L+L++  F  
Sbjct: 659 VLSMDGCKRI-VMLPSLSSLCSLEVLGLRACNLREGALPEDIGHLSSLRSLDLSQNKFVS 717

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
           +P ++ QLS+L  L L++C  L SLPE+P    +++   C SLK + +   L
Sbjct: 718 LPKAINQLSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLKKIPDPIKL 769


>gi|4588050|gb|AAD25966.1|AF093639_1 flax rust resistance protein [Linum usitatissimum]
          Length = 982

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 178/530 (33%), Positives = 275/530 (51%), Gaps = 64/530 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++     P  +++VFLSFRG D R  F   L   L R KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGSFPSVEYEVFLSFRGPDTREQFTDFLYQFLRRYKIHTFRDDDELRKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDL----------------------- 152
              C    +    +    E++    N  D  KK+ DL                       
Sbjct: 166 QTGCYKKAFRKHANKFEGETI---QNWKDALKKVGDLKGWHIGQNDKQGAIADEVSTDIW 222

Query: 153 --FPSDN----KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
                +N     D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ I
Sbjct: 223 SHISKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKI 282

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIHLNFE-----------------------RRRLSR 243
           SS F+   F+ NIR+  ++  G+  +                            + R+SR
Sbjct: 283 SSCFDRCCFIDNIRETQDQKDGVVVLQKKLVSEILRIDSGSVGFINDSGGRKMIKERVSR 342

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            K+L+V  D+ +  + + ++G    F+  SR IIT+R V++L     ++   ++EV  LS
Sbjct: 343 FKILVVLDDVDEKFKFEDMLGNHKDFISQSRFIITSRSVRVLSTLNENQC-KLYEVGSLS 401

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
              SL LFS++AF +N P + +  L+N V+  A G+PL L+V+GS L       WE  + 
Sbjct: 402 KPHSLELFSKHAFKKNTPPSYYETLANDVVYTAAGLPLTLKVIGSLLFKQEIAVWEDTLE 461

Query: 364 KLKRMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           +L+R  ++D +   LK+SYD L  E + IFLD ACFF G ++         C F     I
Sbjct: 462 QLRRTLNLDEVYDRLKISYDALKPEAKEIFLDIACFFIGKNKEEPYYMWTDCNFYPASNI 521

Query: 423 SRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           + L+ K ++ +  ++K  MHD L++MG EIVR+E ++ P KRSR+W  E+
Sbjct: 522 TFLIQKCMIQVGDDDKFKMHDQLRDMGREIVRREDVR-PWKRSRIWSREE 570


>gi|357461481|ref|XP_003601022.1| TMV resistance protein N [Medicago truncatula]
 gi|355490070|gb|AES71273.1| TMV resistance protein N [Medicago truncatula]
          Length = 868

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 200/561 (35%), Positives = 291/561 (51%), Gaps = 104/561 (18%)

Query: 133 SESVLIEGNVNDISKKLSDL------FPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVG 186
           SE+ L++  V ++  KL         FP       VG+ES ++E+   +   S +   +G
Sbjct: 27  SEADLVKKIVKEVLTKLDSTHLSITEFP-------VGLESRVEELIEFIDDQSNKVCMIG 79

Query: 187 IWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG-----------------L 229
           IWG+GG GKTT A AIY+ I+  F    F++NIR+  EK                    +
Sbjct: 80  IWGMGGSGKTTTAKAIYNQINRKFADRSFIENIREICEKDNTGIIRLQEQLLSDVLKIKV 139

Query: 230 ANIH-----LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQL 284
             IH          +RL    VL++  D++  +QI  L G    F  GS +I+TTRDV L
Sbjct: 140 KKIHSITSGTTMIEKRLRGKTVLVILDDVSKFEQIKALCGNRKWFGTGSVLIVTTRDVHL 199

Query: 285 LKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQ 344
           LK     +V HV  +KE+  ++SL LFS +AF +  P   F ELS  V+ Y  G+PLAL+
Sbjct: 200 LK---LLKVAHVCTMKEMDEDESLELFSWHAFREPSPTKYFTELSRNVVAYCGGLPLALE 256

Query: 345 VLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGND 403
           +LGSYL G ++ EW S ++KL+R+P+  +Q+ L++SYDGL DD E++IFLD   FF G D
Sbjct: 257 ILGSYLYGRTKREWTSVLSKLERIPNDQVQEKLRISYDGLKDDMEKDIFLDICFFFIGKD 316

Query: 404 QYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGK 462
           +  V   L+     A IGI+ LV +SLV I  NNK+ MHDLL++MG EIVRQ S+K+PGK
Sbjct: 317 RAYVTKILNGRGLYADIGITVLVERSLVKIEKNNKLGMHDLLRDMGREIVRQSSVKNPGK 376

Query: 463 RSRLWHPEDIYQVLNENTSLPTGINL--------------DSLKE-----LYLGGCSNL- 502
           RSRLW  ED++ VL +N    T   L              +S KE     L    C NL 
Sbjct: 377 RSRLWFHEDVHDVLTKNMVTKTVEGLAFKLQRTDRVCFSTNSFKEMKKLRLLQLDCVNLI 436

Query: 503 --------------------KRFPE-------ISCNIEDLDLKETAIEELP--------- 526
                                  P+       ++ +++  ++++  IE  P         
Sbjct: 437 GDYDCFSNQLRWVKWQGFTFNNIPDDFYQGNLVAMDLKHSNIRQVWIETTPRLFKIMKDC 496

Query: 527 -------SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
                   SIGNL+ L+ ++L +C+ L S+  ++  LKSL+ L LSGC K+E L EEI  
Sbjct: 497 PNLSDIHQSIGNLNSLLLINLKDCTSLNSLPKKIYQLKSLKTLILSGCSKIENL-EEIVQ 555

Query: 580 LESLEYLNLAEKDFEKIPSSM 600
           +ESL  L   +   +++P S+
Sbjct: 556 MESLTTLIAKDTGVKEVPCSI 576


>gi|147789504|emb|CAN71924.1| hypothetical protein VITISV_006193 [Vitis vinifera]
          Length = 1297

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 226/678 (33%), Positives = 338/678 (49%), Gaps = 103/678 (15%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLS 63
           +SS+   I    ++VFLSF+G+D R+NF  HL  AL R+    FI     R  E +    
Sbjct: 91  ASSTCTSIGSWDYEVFLSFKGEDTRYNFTDHLYVALFRKG---FIPLDWMRSGEKT---- 143

Query: 64  SAIEGSKISIVIFSEGYASSRWCLNEL-VKILESKNK---YGQIVVPVFYLVDPSDAGYC 119
                                  L++L +K+L S+     + Q  +P      P      
Sbjct: 144 -----------------------LHQLFLKLLRSQGASLWFSQNALPT-----PDGVWTN 175

Query: 120 PSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIES---QLL 176
               W     +  SE   IE     I  + S      +K+ L+G++  ++E+E    Q++
Sbjct: 176 WRGSWSAGTKMEKSEVDYIEDITCVILMRFSHKLLHVDKN-LIGMDYHLEEMEEIFPQMM 234

Query: 177 -SGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG-------- 227
            S S +   VGI+G+GGIGKTTIA  +Y+ IS+ F  + F+ N +++S+  G        
Sbjct: 235 DSISNDVRMVGIYGLGGIGKTTIAKVLYNRISAQFMITTFIANAKEDSKSQGLLHLQKQL 294

Query: 228 ------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
                          +  ++  + RL   KVL+V  D+ DL Q++ L G  + F PGSR+
Sbjct: 295 LHDILPRRKNFISTVDEGIHMIKDRLCFKKVLLVLDDVDDLNQLEALAGDHNWFGPGSRI 354

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           I+TTRD  LL+ H    V  ++E K+L + + + LF  NAF QNHP   +  +SN V+ Y
Sbjct: 355 IVTTRDKHLLEVHE---VDTLYEAKKLYHKEVVELFCWNAFKQNHPKEEYETVSNFVVHY 411

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
            NG+PL L+VLG +L G +  +WES ++KL+  P+ +IQ VLK SYD LD   Q+IFLD 
Sbjct: 412 VNGLPLGLKVLGCFLYGKTIRQWESELHKLEWEPNQEIQCVLKRSYDELDCT-QHIFLDV 470

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQE 455
           ACFF G D+  V   L+AC+F A+ G+  L  K L++I +NKI MHDLLQ+MG  IV QE
Sbjct: 471 ACFFNGEDKDSVTRILEACKFYAESGMRVLGDKCLISIVDNKIWMHDLLQQMGQHIVGQE 530

Query: 456 SIKDPGKRSRLWHPEDIYQVLNE------------NTSLPTGINLDSLKELYLGGCSNLK 503
             ++PGK SRLW P+ + +VL              N S+P  I++ +     +   S LK
Sbjct: 531 FPEEPGKWSRLWFPDVVSRVLTRKMGTEAIKGILLNLSIPKPIHVTTESFAMMKNLSLLK 590

Query: 504 RFPEI--------------------SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
            + +                     S  +  L  +   +E LPSS      LV+LD+   
Sbjct: 591 IYSDYEFASMREHSKVKLSKDFEFSSYELRYLYWQGYPLESLPSSF-YAEDLVELDMCY- 648

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQ 602
           S LK +      L+ L  + LS C  L ++P+   +  +LE L L       K+  S+ +
Sbjct: 649 SSLKQLWESDMLLEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGK 708

Query: 603 LSKLSDLRLQNCKRLQSL 620
           LSKL  L L+NCK+L+S 
Sbjct: 709 LSKLILLNLKNCKKLRSF 726



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 10/158 (6%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           IN+++L+ L L  CS LK+FP+I  N+E   +L L  TAIEELPSS+ +L+ LV LDL  
Sbjct: 730 INMEALEILNLSDCSELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHLTGLVLLDLKR 789

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C  LKS+ + +C L+SL  L  SGC KLE  PE + ++E+L+ L L     E +PSS+ +
Sbjct: 790 CKNLKSLPTSVCKLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDR 849

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
           L  L  L L+NCK L SLP+  C         TSL+TL
Sbjct: 850 LKVLVLLNLRNCKNLVSLPKGMCT-------LTSLETL 880



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 4/141 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLV 536
           SLPT +  L+SL+ L+  GCS L+ FPE+  ++E+L    L  T+IE LPSSI  L  LV
Sbjct: 795 SLPTSVCKLESLEYLFPSGCSKLENFPEMMEDMENLKELLLDGTSIEGLPSSIDRLKVLV 854

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L NC  L S+   +C L SL  L +SGC +L  LP+ +G+L+ L   +       + 
Sbjct: 855 LLNLRNCKNLVSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQP 914

Query: 597 PSSMKQLSKLSDLRLQNCKRL 617
           P S+  L  L  L    CKRL
Sbjct: 915 PDSIVLLRNLKVLIYPGCKRL 935



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 86/142 (60%), Gaps = 5/142 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC---NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           L+ L  + L  C +L   P+IS    N+E L L   +++ ++  SIG LS+L+ L+L NC
Sbjct: 661 LEKLNTIRLSCCQHLIEIPDISVSAPNLEKLTLDGCSSLVKVHPSIGKLSKLILLNLKNC 720

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L+S  S + N+++L  LNLS C +L+K P+  GN+E L  L LA    E++PSS++ L
Sbjct: 721 KKLRSFLS-IINMEALEILNLSDCSELKKFPDIQGNMEHLLELYLASTAIEELPSSVEHL 779

Query: 604 SKLSDLRLQNCKRLQSLPELPC 625
           + L  L L+ CK L+SLP   C
Sbjct: 780 TGLVLLDLKRCKNLKSLPTSVC 801



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 86/187 (45%), Gaps = 29/187 (15%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE---TAIEELPSSIGNLSRL 535
             SLP G+  L SL+ L + GCS L   P+   +++ L       TAI + P SI  L  L
Sbjct: 865  VSLPKGMCTLTSLETLIVSGCSQLNNLPKNLGSLQHLAQPHADGTAITQPPDSIVLLRNL 924

Query: 536  VDLDLTNC-------------------SGLKSVSSRLCN----LKSLRRLNLSGCLKLE- 571
              L    C                   +G   +S RL +      S   L+LS C  +E 
Sbjct: 925  KVLIYPGCKRLAPTSLGSLFSFWLLHRNGSNGISLRLPSGFSCFMSFTNLDLSDCKLIEG 984

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIH 630
             +P  I +L SL+ L+L+  DF   P+ + +L+ L DLRL   + L  +P+LP     IH
Sbjct: 985  AIPNSICSLISLKKLDLSRNDFLSTPAGISELTSLKDLRLGQYQSLTEIPKLPPSVRDIH 1044

Query: 631  ARHCTSL 637
              +CT+L
Sbjct: 1045 PHNCTAL 1051


>gi|356502071|ref|XP_003519845.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 694

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 178/440 (40%), Positives = 250/440 (56%), Gaps = 61/440 (13%)

Query: 93  ILESKNKYGQIVVPVFYLVDPSDAGY-CPSLG-------------------W-------- 124
           ++ES     QIV+PVF+ VDPS   + C   G                   W        
Sbjct: 1   MIESMEINKQIVLPVFFNVDPSHVRHQCGDYGDALAKHEEKLKENMLKVKTWRSAMKKAA 60

Query: 125 -MGIFDIPTS---ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGST 180
            +  F  PT+   ES L+ G V DI +KLS   P ++ + LVG++  I  I+S LL  S+
Sbjct: 61  DLSGFHYPTNFEDESDLVHGIVEDIWEKLSKFCPRES-NGLVGIDQNIARIQSLLLMESS 119

Query: 181 EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG------------- 227
           E   VGIWG+GGIGKTTIA A++   SS ++G  F+ N+++E E+ G             
Sbjct: 120 EVLFVGIWGMGGIGKTTIARAVFDKFSSQYDGLCFL-NVKEELEQHGLSLLREKLISELF 178

Query: 228 ---GLANI------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIIT 278
              GL          LN   RR+ R KVL+V  D+   +QI  L+G    F  GSRVIIT
Sbjct: 179 EGEGLHTSGTSKARFLNSSIRRMGRKKVLVVLDDVNTSEQIKDLVGEPTCFGAGSRVIIT 238

Query: 279 TRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANG 338
           +RD  +L +     V  + EVKE+   DSL LF  NAF ++ P  G+ +L+  V+K A G
Sbjct: 239 SRDQNVLTS---GGVHQIHEVKEMDSRDSLKLFCLNAFNESQPKMGYEKLTEEVVKIAQG 295

Query: 339 VPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTAC 397
           +PLAL+VLG+  +  S  + WESA++K+K+ P+  IQ VL+ S+DGL++ E+  FLD A 
Sbjct: 296 IPLALRVLGADFRSRSTIDMWESALSKIKKYPNKKIQSVLRFSFDGLEELEKKAFLDIAF 355

Query: 398 FFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQES 456
           FF+ + +  V+  LDA  F   +GI  L  K+L+TIS +N+I MHDL ++MG EIVRQES
Sbjct: 356 FFEEDSKDYVITQLDAWGFYGAVGIEVLQRKALITISKDNRIQMHDLTRQMGCEIVRQES 415

Query: 457 IKDPGKRSRLWHPEDIYQVL 476
           I +PG+RSRL   E++Y VL
Sbjct: 416 ITNPGRRSRLRDSEEVYNVL 435


>gi|356506778|ref|XP_003522153.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1161

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 206/587 (35%), Positives = 308/587 (52%), Gaps = 86/587 (14%)

Query: 133 SESVLIEGNVNDISKKLS--DLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWG 189
           +ES  I+  V +++  L   +LF +DN    VGVE  ++E+   L L  S     +G+WG
Sbjct: 247 NESEAIKSIVENVTHLLDKRELFVADNP---VGVEPRVQEMIQLLDLKSSNHVLLLGMWG 303

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRD-ESEKVGGLA--------------NIHL 234
           +GGIGKTT A AIY+ I  +FEG  F+ +IR+   +  G +                IH 
Sbjct: 304 MGGIGKTTTAKAIYNKIGRNFEGRSFLAHIREVWGQDTGKICLQKQILFDICKQTETIH- 362

Query: 235 NFE------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
           N E      ++RL   +VL+V  D+++L+Q++ L G  + F  GSR+IIT+RD  +L   
Sbjct: 363 NVESGKYLLKQRLCHKRVLLVLDDVSELEQLNTLCGSREWFGRGSRIIITSRDKHIL--- 419

Query: 289 RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
           RG  V  V+ +K +   +S+ LFS +AF Q      F+ELS  +I+Y+ G+PLAL+VLG 
Sbjct: 420 RGKGVDKVYIMKGMDERESIELFSWHAFKQESLPEDFIELSANLIEYSGGLPLALEVLGC 479

Query: 349 YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLV 407
           YL  M   EW++ + KLKR+P+  +QK LK+SYDGL DD E+ IFLD ACFF G D+  V
Sbjct: 480 YLFDMEVTEWKTVLQKLKRIPNCQVQKKLKISYDGLSDDTEREIFLDIACFFIGMDRNDV 539

Query: 408 MNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRL 466
           +  L+ C   A+ GI  LV +SLVT+ + NK+ MHDLL++MG EI+R +S K+P +RSRL
Sbjct: 540 ICILNGCGLFAEHGIRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRAKSPKEPEERSRL 599

Query: 467 WHPEDIYQVLNE-----------------NTSLPTGINLDSLKELYL---------GGCS 500
           W  ED+  VL++                 NT   +      +K+L L         G   
Sbjct: 600 WFHEDVLDVLSKETGTKAVEGLTLMLPRTNTKCLSTTAFKKMKKLRLLQLAGVQLAGDFK 659

Query: 501 NLKR---------FPEISCNIED--------LDLKETAIEELPSSIGNLSRLVDLDLTNC 543
           NL R         FP + C   D        ++L+ + ++ L      + +L  L+L++ 
Sbjct: 660 NLSRDLRWLCWHGFP-LKCIPTDFYQGSLVSIELENSNVKLLWKETQLMEKLKILNLSHS 718

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQ 602
           S L + +    NL +L +L L  C +L K+   IG L+ +  +NL +      +P S+ +
Sbjct: 719 SNL-TQTPDFSNLPNLEKLILIDCPRLSKVSHTIGRLKEVVMINLKDCVSLRNLPRSIYK 777

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
           L  L  L L  C  +  L E             SL TL   +T +TR
Sbjct: 778 LKSLKTLILSGCLMIDKLEE-------DLEQMKSLTTLIADNTAITR 817



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 75/104 (72%), Gaps = 1/104 (0%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VFLSFRG+D R +F SHL  AL    I  F DD+ L RG++I+PSL  AIE S+IS+V
Sbjct: 61  YEVFLSFRGEDTRASFTSHLYTALLNAGIIVFKDDESLLRGDQIAPSLRLAIEQSRISVV 120

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
           +FS  YA SRWCL+EL KI+E     GQ+VVPVFY VDPS+  +
Sbjct: 121 VFSRNYAESRWCLDELEKIMECHRTIGQVVVPVFYDVDPSEVRH 164



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 21/199 (10%)

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH-------PEDIYQ 474
           + R   K L T +  K+    LLQ  G ++           R   WH       P D YQ
Sbjct: 625 LPRTNTKCLSTTAFKKMKKLRLLQLAGVQLAGDFKNLSRDLRWLCWHGFPLKCIPTDFYQ 684

Query: 475 -------VLNENTSL---PTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA- 521
                  + N N  L    T + ++ LK L L   SNL + P+ S   N+E L L +   
Sbjct: 685 GSLVSIELENSNVKLLWKETQL-MEKLKILNLSHSSNLTQTPDFSNLPNLEKLILIDCPR 743

Query: 522 IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
           + ++  +IG L  +V ++L +C  L+++   +  LKSL+ L LSGCL ++KL E++  ++
Sbjct: 744 LSKVSHTIGRLKEVVMINLKDCVSLRNLPRSIYKLKSLKTLILSGCLMIDKLEEDLEQMK 803

Query: 582 SLEYLNLAEKDFEKIPSSM 600
           SL  L        ++P S+
Sbjct: 804 SLTTLIADNTAITRVPFSL 822


>gi|242276423|gb|ACS91453.1| M3 [Linum usitatissimum]
          Length = 1293

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 170/525 (32%), Positives = 276/525 (52%), Gaps = 55/525 (10%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++   + P  +++VFLSFRG D R+     L   LCR KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGLFPSVEYEVFLSFRGPDTRYQITDILYRFLCRTKIHTFRDDDELRKGEEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSDAGY 118
            +L  AI  SKI + I S GYA+S+WCL EL +I+  +     +I+ P+FY+VDP D  +
Sbjct: 106 SNLLRAIYQSKIYVPIISRGYANSKWCLMELAEIVRYQELDTRRIIFPIFYMVDPKDVRH 165

Query: 119 CPS------------------LGWMGIFD-IPTSESVLIEGN------VNDISKKLSDLF 153
                                  W    + + T +   ++ N       +++S  +    
Sbjct: 166 QTGHYRKAFQEHATKYDEMTIQNWKNALNKVGTLKGWHVKNNDEQAAIADEVSANIWSHI 225

Query: 154 PSDN----KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
             +N     D+LVG++  ++ I   L   S     VG++G+GGIGKTT A A+Y+ ISSH
Sbjct: 226 SKENFILETDELVGIDDHVEVILETLNLDSKSVTMVGLYGMGGIGKTTTAKAVYNKISSH 285

Query: 210 FEGSYFMQNIRDESEKVGGLANIH------------LNFE---------RRRLSRMKVLI 248
           F+   F+ N+R   E+  G+ N+             + F          + R+S+ K+L+
Sbjct: 286 FDRCCFVDNVRAMQEQKDGIFNLQKKLVSEILRMDSVGFTNDSGGRKMIKERVSKSKILV 345

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  D+ +  + + ++G  + F  G+R IIT+R+  +L +H       ++EV  +S  DSL
Sbjct: 346 VLDDVDEKFKFEDILGCPNDFDYGTRFIITSRNQNVL-SHLNENQCKLYEVGSMSQPDSL 404

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            LFS++AF +N P + +  L+N ++    G+PL L+V GS+L G     WE  + +L++ 
Sbjct: 405 ELFSKHAFKKNTPPSDYETLANEIVSTTGGLPLTLKVTGSFLFGQEIGVWEDTLEQLRKT 464

Query: 369 PHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
            ++D +   LK+SYD L  E + IFLD ACFF G ++         C    K  I  L+ 
Sbjct: 465 LNLDEVYDRLKISYDALKVEAKEIFLDIACFFIGRNKEQPYYMWSDCNLYPKSNIIFLIQ 524

Query: 428 KSLVTISNNKI-TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           + ++ + ++ +  MHD L++MG EIVR+E ++ P KRSR+W  E+
Sbjct: 525 RCMIQVGDDGVFQMHDQLRDMGREIVRREDVERPWKRSRIWSSEE 569



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 10/115 (8%)

Query: 495 YLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC 554
           + G  S   RFP+   +IE L L    I+E+   IG L +L  LDLT+C   K       
Sbjct: 688 FSGRLSFCWRFPK---SIEVLSLFRIEIKEV--DIGELKKLKTLDLTSCRIQKISGGTFG 742

Query: 555 NLKSLRRLNLS--GCLKLEKLPEEIGNLESLEYLNLA---EKDFEKIPSSMKQLS 604
            LK L  L+L+   C  L ++  ++G L SL+ L  A   E +  + P  +K+LS
Sbjct: 743 MLKGLIELHLNYIKCTDLREVVADVGQLSSLKVLKTAGAKEVEMNEFPLGLKELS 797



 Score = 38.9 bits (89), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 28/214 (13%)

Query: 437  KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYL 496
            +I     LQ++    V+  S+++    + L   +D+   + E  +L   ++L+ LKE+ +
Sbjct: 1050 RIAFFSKLQKLTKLTVKVPSLREIEGLAELKSLKDL---ILEGCTLLRKLHLEKLKEVDI 1106

Query: 497  GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK--SVSSRLC 554
            GGC  L     + C ++D       +  +PS       LV L +++C  L+   +   L 
Sbjct: 1107 GGCPALTEL--VPCELDD-----QTVVVVPS-------LVTLTISDCPRLEVGPMIQSLP 1152

Query: 555  NLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD-----FEKIP--SSMKQLSKL 606
            +   L+ L LS   +  E+  E IG+LE L +L L   D      E+I   S +++L+ L
Sbjct: 1153 SFPMLKYLTLSMVKITKEEELEVIGSLEELVHLWLELDDTSSSSIERISFLSKLQELTTL 1212

Query: 607  SDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            + +++ + + ++ L EL     +    CTSL+ L
Sbjct: 1213 T-VKVPSLREIEGLAELKSLEYLFLEGCTSLERL 1245


>gi|186478922|ref|NP_174037.3| transmembrane receptors / ATP binding protein [Arabidopsis
           thaliana]
 gi|332192668|gb|AEE30789.1| transmembrane receptors / ATP binding protein [Arabidopsis
           thaliana]
          Length = 1384

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 220/733 (30%), Positives = 360/733 (49%), Gaps = 138/733 (18%)

Query: 12  PHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGS 69
           PH  K+DVFLSFRG D R NF  HL  AL ++K+  F D++ + RG+EIS SL + +E S
Sbjct: 9   PHRLKYDVFLSFRGADTRDNFGDHLYKAL-KDKVRVFRDNEGMERGDEISSSLKAGMEDS 67

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------- 116
             S+++ S  Y+ SRWCL+EL  + + K+   + ++P+FY VDPS               
Sbjct: 68  AASVIVISRNYSGSRWCLDELAMLCKMKSSLDRRILPIFYHVDPSHVRKQSDHIKKDFEE 127

Query: 117 -------------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                         +  +L  +G     + D  + +  +IE  V  +  +LS+  P    
Sbjct: 128 HQVRFSEEKEKVQEWREALTLVGNLAGYVCDKDSKDDDMIELVVKRVLAELSNT-PEKVG 186

Query: 159 DQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
           + +VG+ES +K++   +    S+    +G++G+GGIGKTT+A A Y+ I  +FE   F+ 
Sbjct: 187 EFIVGLESPLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFIS 246

Query: 218 NIRDESEKVGGLA------------------NIHLNFERRR--LSRMKVLIVFYDLTDLK 257
           +IR+ S    GL                   ++ +  E+ +  +   K+++V  D+  + 
Sbjct: 247 DIRERSSAENGLVTLQKTLIKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHID 306

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+  L+G    +  G+ ++ITTRD ++L       V   +EVK L+   +L LFS ++  
Sbjct: 307 QVHALVGETRWYGQGTLIVITTRDSEILSK---LSVNQQYEVKCLTEPQALKLFSYHSLR 363

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMPHMDIQKV 376
           +  P    L LS  +++ +  +PLA++V GS L    EE +W++ ++KLK+    ++Q V
Sbjct: 364 KEEPTKNLLALSKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDV 423

Query: 377 LKVSYDGLDDEEQNIFLDTACFFK----GNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
           L++S+  LDDEE+ +FLD AC F       D+ +++  L  C  +A+  +S L  KSLV 
Sbjct: 424 LELSFKSLDDEEKKVFLDIACLFLKMEIKKDEVVIV--LKGCGLNAEAALSVLRQKSLVK 481

Query: 433 I-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLD 489
           I +N+ + MHD +++MG ++V +ES +DPG RSRLW   +I  VLN  + TS   GI LD
Sbjct: 482 ILANDTLWMHDQIRDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLD 541

Query: 490 SLKELYLGGCSN-----------------------LKRFP--------EISCNIED---- 514
             K+      ++                       L RFP        EI+  +E     
Sbjct: 542 FKKKFARDPTADEIVSRNLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPM 601

Query: 515 --------------------------LDLKETAIEELPSSIGNLSR-LVDLDLTNCSGLK 547
                                     +  K   +E LP     L+R L  LDL+  SG++
Sbjct: 602 TKLRLLQINNVELEGNLKLLPSELKWIQWKGCPLENLPPDF--LARQLSVLDLSE-SGIR 658

Query: 548 SVSSRLCNL--KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPSSMKQLS 604
            V +    +  ++L+ + L GC  LE +P ++ N E+LE L   +     K+P S+  L 
Sbjct: 659 QVQTLRNKMVDENLKVVILRGCHSLEAIP-DLSNHEALEKLVFEQCTLLVKVPKSVGNLR 717

Query: 605 KLSDLRLQNCKRL 617
           KL  L  + C +L
Sbjct: 718 KLIHLDFRRCSKL 730



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 25/196 (12%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            L+ L EL +  C  LKR PE   +++ L    +KET + ELP S GNLS L+ L++    
Sbjct: 974  LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 1033

Query: 545  GLKSVSSRLCNLKSLRRL-----NLSGCLKLE-----------KLPEEIGNLESLEYLNL 588
              +   S +       R      + S  LKLE           K+P+++  L  L  LNL
Sbjct: 1034 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNL 1093

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
                F  +PSS+ +LS L +L L++C+ L+ LP LPC    ++  +C SL+++S+ S L 
Sbjct: 1094 GNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELT 1153

Query: 648  TRSSKHWDIFNFSNCS 663
              +       N +NC+
Sbjct: 1154 ILTD-----LNLTNCA 1164



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 4/136 (2%)

Query: 489 DSLKELYLGGCSNLKRFPEISCN--IEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           ++LK + L GC +L+  P++S +  +E L  ++ T + ++P S+GNL +L+ LD   CS 
Sbjct: 670 ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 729

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L      +  LK L +L LSGC  L  LPE IG + SL+ L L     + +P S+ +L  
Sbjct: 730 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQN 789

Query: 606 LSDLRLQNCKRLQSLP 621
           L  L L+ CK +Q LP
Sbjct: 790 LEILSLRGCK-IQELP 804



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 29/170 (17%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETAIEELPSSIGNLSRL 535
           +LP+ I +L +L++L+L  C++L + P+ S N    ++ L +  +A+EELP    +L  L
Sbjct: 825 NLPSSIGDLKNLQDLHLVRCTSLSKIPD-SINELKSLKKLFINGSAVEELPLKPSSLPSL 883

Query: 536 VDLDLTNCSGLKSVSS-----------------------RLCNLKSLRRLNLSGCLKLEK 572
            D    +C  LK V S                        +  L  +R L L  C  L+ 
Sbjct: 884 YDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKF 943

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           LP+ IG++++L  LNL   + E++P    +L KL +LR+ NCK L+ LPE
Sbjct: 944 LPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 993



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 25/159 (15%)

Query: 488 LDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC- 543
           L  L++L+L GCS+L   PE      ++++L L  TAI+ LP SI  L  L  L L  C 
Sbjct: 740 LKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK 799

Query: 544 ---------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
                                + LK++ S + +LK+L+ L+L  C  L K+P+ I  L+S
Sbjct: 800 IQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKS 859

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L+ L +     E++P     L  L D    +CK L+ +P
Sbjct: 860 LKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 898



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 481  SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            SLP+  + L +L+EL L  C  LKR P + C +E L+L      E  S +  L+ L DL+
Sbjct: 1100 SLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLN 1159

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            LTNC+ +  +   L +L +L+RL ++GC
Sbjct: 1160 LTNCAKVVDIPG-LEHLTALKRLYMTGC 1186



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 19/150 (12%)

Query: 498  GCSNLKRFPEIS------CNIEDLDLKETAIE-ELPSSIGNLSRLVDLDLTNCSGLKSVS 550
            G S   RF E+         +E+LD     I  ++P  +  LS L+ L+L N +   S+ 
Sbjct: 1044 GTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGN-NYFHSLP 1102

Query: 551  SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
            S L  L +L+ L+L  C +L++LP     LE L   NLA     +  S + +L+ L+DL 
Sbjct: 1103 SSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL---NLANCFSLESVSDLSELTILTDLN 1159

Query: 611  LQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            L NC ++  +P L         H T+LK L
Sbjct: 1160 LTNCAKVVDIPGL--------EHLTALKRL 1181


>gi|21539521|gb|AAM53313.1| disease resistance RPP5-like protein [Arabidopsis thaliana]
          Length = 1147

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 244/702 (34%), Positives = 350/702 (49%), Gaps = 93/702 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF SF G DVR  F+SHL  AL R  I TF+D  + R   I+ +L +AI  ++ISIV
Sbjct: 12  RYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------------------DA 116
           IFSE YASS WCLNELV+I +   K  Q+V+PVFY VDPS                  D 
Sbjct: 72  IFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDK 131

Query: 117 GYCPSLGWM-GIFDI-----------PTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                  W+  + DI           PT E+ +++   ND+S KL  L P    D  VG+
Sbjct: 132 PEDQKQRWVKALTDISNLAGEDLRNGPT-EAFMVKKIANDVSNKLFPL-PKGFGD-FVGI 188

Query: 165 ESIIKEIESQLLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           E  IK I+S L   S E    VGIWG  GIGK+TI  A++S +SS F    F+       
Sbjct: 189 EDHIKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSG 248

Query: 224 EKVGG---------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
             V G         L+ I         H     +RL   KVLI+  D+ +L+ +  L+G+
Sbjct: 249 SDVSGMKLSWEKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGK 308

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            + F  GSR+I+ T+D QLLK H    +  V+EV+  S   +L + S+ AFG++ P   F
Sbjct: 309 AEWFGSGSRIIVITQDKQLLKAHE---IDLVYEVELPSQGLALKMISQYAFGKDSPPDDF 365

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            EL+  V +    +PL L VLGS LKG  ++EW   + +L+      I++ L+V YD L+
Sbjct: 366 KELAFEVAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLN 425

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLL 444
            + + +F   ACFF G     V   L+       +G++ L  KSL+ I+ +  I MH+LL
Sbjct: 426 KKNRELFKCIACFFNGFKVSNVKELLE-----DDVGLTMLADKSLIRITPDGDIEMHNLL 480

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GIN-----LDSLKELYLG 497
           +++G EI R +S  +P KR  L + EDI +V+ E T   T  GI      L S + L + 
Sbjct: 481 EKLGREIDRAKSKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVI 540

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD---LTNCSGLKSVSSRLC 554
              + K       N++ L++   +   L S IG  S+ +DL    +     LK +    C
Sbjct: 541 NEESFKGMR----NLQYLEIGHWSEIGLWSEIGLWSK-IDLPQGLVYLPLKLKLLKWNYC 595

Query: 555 NLKSLRRLNLSGCL--------KLEKLPEEIGNLESLEYLNLA-EKDFEKIPSSMKQLSK 605
            LKSL     +  L        KLEKL E    L SL+ ++L    + ++IP  +     
Sbjct: 596 PLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIP-DLSLAIN 654

Query: 606 LSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
           L +L L  C+ L +LP     SSI  ++   L+TL  S  LL
Sbjct: 655 LEELNLSKCESLVTLP-----SSI--QNAIKLRTLYCSGVLL 689



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 53/86 (61%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS  IE L L+ TAIEE+P  I +L+RL  L + 
Sbjct: 990  LPTDVNLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLTRLSVLLMY 1049

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L SL   + + C
Sbjct: 1050 CCQRLKNISPNIFRLTSLMVADFTDC 1075



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 7/137 (5%)

Query: 487  NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            +L SLK + L    NL   P++S   N++ L L    ++  LPS+IGNL RLV L++  C
Sbjct: 925  SLGSLKRMDLSESENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKEC 984

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            +GL+ + + + NL SL  L+LSGC  L   P     +E L   N A    E++P  ++ L
Sbjct: 985  TGLELLPTDV-NLSSLIILDLSGCSSLRTFPLISTRIECLYLENTA---IEEVPCCIEDL 1040

Query: 604  SKLSDLRLQNCKRLQSL 620
            ++LS L +  C+RL+++
Sbjct: 1041 TRLSVLLMYCCQRLKNI 1057



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 4/90 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLKE+YL G   LK  P++S   N+E L L    ++  LPSSI N ++L++LD+ +C 
Sbjct: 766 LGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCK 825

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L+S  + L NL+SL  LNL+GC  L   P
Sbjct: 826 KLESFPTDL-NLESLEYLNLTGCPNLRNFP 854



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 25/195 (12%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
            S PT +NL+SL+ L L GC NL+ FP I       ++ +   E E+     N +    LD
Sbjct: 829  SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLD 888

Query: 540  LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
              +C     +    C  +   L  L++SGC K EKL E I +L SL+ ++L+E ++  +I
Sbjct: 889  YLDC----LMRCMPCEFRPEYLTFLDVSGC-KHEKLWEGIQSLGSLKRMDLSESENLTEI 943

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLS---NSSTLLTR 649
            P  + + + L  L L  CK L +LP     L     +  + CT L+ L    N S+L+  
Sbjct: 944  P-DLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSSLI-- 1000

Query: 650  SSKHWDIFNFSNCSN 664
                  I + S CS+
Sbjct: 1001 ------ILDLSGCSS 1009



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 41/194 (21%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDL-KETAIEELPSSIGNLSRLVD 537
           +LP G    SLK++ LG  +NLK  P++S   N+E+L+L K  ++  LPSSI N  +L  
Sbjct: 626 TLPLG----SLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKLRT 681

Query: 538 LDLTNCSG-----LKSVSSRLCNL--------------------KSLRRLNLSGCLKLEK 572
           L    CSG     LKS+   +CNL                    + L+RL    C  +++
Sbjct: 682 L---YCSGVLLIDLKSLEG-MCNLEYLSVDWSSMEDTQGLIYLPRKLKRLWWDYC-PVKR 736

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR 632
           LP      E L  L +   D EK+    + L  L ++ L   K L+ +P+L    ++   
Sbjct: 737 LPSNF-KAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERL 795

Query: 633 H---CTSLKTLSNS 643
           +   C SL TL +S
Sbjct: 796 YLFGCESLVTLPSS 809


>gi|4588048|gb|AAD25965.1|AF093638_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1303

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 180/541 (33%), Positives = 282/541 (52%), Gaps = 65/541 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++     P  ++DVFLSFRG D R  F   L   LC  KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGSFPSVEYDVFLSFRGPDTRKQFTDFLYHFLCYYKIHTFRDDDELRKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDL----FPSDNK------------- 158
              C    +    +    E++    N  D  KK+ DL       D+K             
Sbjct: 166 QTGCYKKAFRKHANKFDGETI---QNWKDALKKVGDLKGWHIGKDDKQGAIADEVSADIW 222

Query: 159 ------------DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
                       D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ I
Sbjct: 223 SHISKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKI 282

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIH--------------LNFE---------RRRLSR 243
           SS F+   F+ NIR+  ++  G+  +               + F          + R+SR
Sbjct: 283 SSCFDRCCFIDNIRETQDQKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIKERVSR 342

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            K+L+V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV  +S
Sbjct: 343 FKILVVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGSMS 401

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
              SL LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       WE  + 
Sbjct: 402 KPRSLELFSKHAFKKNTPPSDYETLANDVVDTTAGLPLTLKVIGSILFKQEIAVWEDTLE 461

Query: 364 KLKRMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
           +L++  ++D +   LK+SYD L  E + IFLD ACFF G ++         C F     I
Sbjct: 462 QLRKTLNLDEVYDRLKISYDALKPEAKEIFLDIACFFIGKNKEKPYYMWTDCNFYPASNI 521

Query: 423 SRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED-IYQVLNENT 480
             L+ + ++ +  ++K  MHD L++MG EIVR+E ++ P KRSR+W  E+ I  +LN+  
Sbjct: 522 IFLIQRCMIQVGDDDKFKMHDQLRDMGREIVRREDVR-PWKRSRIWSREEGIDLLLNKKG 580

Query: 481 S 481
           S
Sbjct: 581 S 581



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 43/173 (24%)

Query: 490  SLKELYLGGCSNLKRFPEISC-----NIEDLDLKETAI--EELPSSIGNLSRLVDLDLT- 541
            S+ EL +  C  L+  P I        ++ LDL    I  EE   +IG+L  LV L L  
Sbjct: 991  SMAELTIRDCPRLEVGPMIRSLPKFPMLKKLDLAVANITKEEDLDAIGSLEELVRLKLVL 1050

Query: 542  --NCSGLKSVSSR---------------------LCNLKSLRRLNLSGCLKLEKLPEEIG 578
               CSG++ ++S                      L  LKSL+RL L GC  L +LP    
Sbjct: 1051 DDTCSGIERIASLSKLQKLTTLVVKVPSLREIEGLAELKSLQRLILVGCTSLGRLP---- 1106

Query: 579  NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL------QSLPELP 624
             LE L+ L++    D  ++  ++  +  L +L +++C RL      QSLP+ P
Sbjct: 1107 -LEKLKELDIGGCPDLAELVQTVVAVPSLVELTIRDCPRLEVGPMIQSLPKFP 1158



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 13/163 (7%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
            L SL+ L L GC++L R P     +++LD+     + EL  ++  +  LV+L + +C  L
Sbjct: 1088 LKSLQRLILVGCTSLGRLP--LEKLKELDIGGCPDLAELVQTVVAVPSLVELTIRDCPRL 1145

Query: 547  K--SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD----FEKIPSS 599
            +   +   L     L +L LS   +  E   E +G+LE L+ L L   D     E+I SS
Sbjct: 1146 EVGPMIQSLPKFPMLNKLTLSMVNITKEDELEVLGSLEELDRLVLKLDDTCSSIERI-SS 1204

Query: 600  MKQLSKLSDLRLQ--NCKRLQSLPELPCGSSIHARHCTSLKTL 640
            + +L KL+ L ++  + + ++ L EL    S+  + CTSL+ L
Sbjct: 1205 LSKLQKLTTLVVEVPSLREIEGLAELKSLQSLDLQGCTSLERL 1247


>gi|42566891|ref|NP_193420.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658418|gb|AEE83818.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 244/702 (34%), Positives = 350/702 (49%), Gaps = 93/702 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++DVF SF G DVR  F+SHL  AL R  I TF+D  + R   I+ +L +AI  ++ISIV
Sbjct: 12  RYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIREARISIV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------------------DA 116
           IFSE YASS WCLNELV+I +   K  Q+V+PVFY VDPS                  D 
Sbjct: 72  IFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDK 131

Query: 117 GYCPSLGWM-GIFDI-----------PTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                  W+  + DI           PT E+ +++   ND+S KL  L P    D  VG+
Sbjct: 132 PEDQKQRWVKALTDISNLAGEDLRNGPT-EAFMVKKIANDVSNKLFPL-PKGFGD-FVGI 188

Query: 165 ESIIKEIESQLLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           E  IK I+S L   S E    VGIWG  GIGK+TI  A++S +SS F    F+       
Sbjct: 189 EDHIKAIKSILCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSG 248

Query: 224 EKVGG---------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
             V G         L+ I         H     +RL   KVLI+  D+ +L+ +  L+G+
Sbjct: 249 SDVSGMKLSWEKELLSEILGQKDIKIDHFGVVEQRLKHKKVLILLDDVDNLEFLKTLVGK 308

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
            + F  GSR+I+ T+D QLLK H    +  V+EV+  S   +L + S+ AFG++ P   F
Sbjct: 309 AEWFGSGSRIIVITQDKQLLKAHE---IDLVYEVELPSQGLALKMISQYAFGKDSPPDDF 365

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLD 385
            EL+  V +    +PL L VLGS LKG  ++EW   + +L+      I++ L+V YD L+
Sbjct: 366 KELAFEVAELVGSLPLGLSVLGSSLKGRDKDEWVKMMPRLRNDSDDKIEETLRVGYDRLN 425

Query: 386 DEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLL 444
            + + +F   ACFF G     V   L+       +G++ L  KSL+ I+ +  I MH+LL
Sbjct: 426 KKNRELFKCIACFFNGFKVSNVKELLE-----DDVGLTMLADKSLIRITPDGDIEMHNLL 480

Query: 445 QEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GIN-----LDSLKELYLG 497
           +++G EI R +S  +P KR  L + EDI +V+ E T   T  GI      L S + L + 
Sbjct: 481 EKLGREIDRAKSKGNPAKRQFLTNFEDIQEVVTEKTGTETVLGIRVPPTVLFSTRPLLVI 540

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD---LTNCSGLKSVSSRLC 554
              + K       N++ L++   +   L S IG  S+ +DL    +     LK +    C
Sbjct: 541 NEESFKGMR----NLQYLEIGHWSEIGLWSEIGLWSK-IDLPQGLVYLPLKLKLLKWNYC 595

Query: 555 NLKSLRRLNLSGCL--------KLEKLPEEIGNLESLEYLNLA-EKDFEKIPSSMKQLSK 605
            LKSL     +  L        KLEKL E    L SL+ ++L    + ++IP  +     
Sbjct: 596 PLKSLPSTFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMDLGCSNNLKEIP-DLSLAIN 654

Query: 606 LSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
           L +L L  C+ L +LP     SSI  ++   L+TL  S  LL
Sbjct: 655 LEELNLSKCESLVTLP-----SSI--QNAIKLRTLYCSGVLL 689



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 53/86 (61%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LPT +NL SL  L L GCS+L+ FP IS  IE L L+ TAIEE+P  I +L+RL  L + 
Sbjct: 990  LPTDVNLSSLIILDLSGCSSLRTFPLISTRIECLYLENTAIEEVPCCIEDLTRLSVLLMY 1049

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L SL   + + C
Sbjct: 1050 CCQRLKNISPNIFRLTSLMVADFTDC 1075



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 79/137 (57%), Gaps = 7/137 (5%)

Query: 487  NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            +L SLK + L    NL   P++S   N++ L L    ++  LPS+IGNL RLV L++  C
Sbjct: 925  SLGSLKRMDLSESENLTEIPDLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKEC 984

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            +GL+ + + + NL SL  L+LSGC  L   P     +E L   N A    E++P  ++ L
Sbjct: 985  TGLELLPTDV-NLSSLIILDLSGCSSLRTFPLISTRIECLYLENTA---IEEVPCCIEDL 1040

Query: 604  SKLSDLRLQNCKRLQSL 620
            ++LS L +  C+RL+++
Sbjct: 1041 TRLSVLLMYCCQRLKNI 1057



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 4/90 (4%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLKE+YL G   LK  P++S   N+E L L    ++  LPSSI N ++L++LD+ +C 
Sbjct: 766 LGSLKEMYLHGSKYLKEIPDLSLAINLERLYLFGCESLVTLPSSIQNATKLINLDMRDCK 825

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L+S  + L NL+SL  LNL+GC  L   P
Sbjct: 826 KLESFPTDL-NLESLEYLNLTGCPNLRNFP 854



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 25/195 (12%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
            S PT +NL+SL+ L L GC NL+ FP I       ++ +   E E+     N +    LD
Sbjct: 829  SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLD 888

Query: 540  LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
              +C     +    C  +   L  L++SGC K EKL E I +L SL+ ++L+E ++  +I
Sbjct: 889  YLDC----LMRCMPCEFRPEYLTFLDVSGC-KHEKLWEGIQSLGSLKRMDLSESENLTEI 943

Query: 597  PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLS---NSSTLLTR 649
            P  + + + L  L L  CK L +LP     L     +  + CT L+ L    N S+L+  
Sbjct: 944  P-DLSKATNLKRLYLNGCKSLVTLPSTIGNLHRLVRLEMKECTGLELLPTDVNLSSLI-- 1000

Query: 650  SSKHWDIFNFSNCSN 664
                  I + S CS+
Sbjct: 1001 ------ILDLSGCSS 1009



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 41/194 (21%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDL-KETAIEELPSSIGNLSRLVD 537
           +LP G    SLK++ LG  +NLK  P++S   N+E+L+L K  ++  LPSSI N  +L  
Sbjct: 626 TLPLG----SLKKMDLGCSNNLKEIPDLSLAINLEELNLSKCESLVTLPSSIQNAIKLRT 681

Query: 538 LDLTNCSG-----LKSVSSRLCNL--------------------KSLRRLNLSGCLKLEK 572
           L    CSG     LKS+   +CNL                    + L+RL    C  +++
Sbjct: 682 L---YCSGVLLIDLKSLEG-MCNLEYLSVDWSSMEGTQGLIYLPRKLKRLWWDYC-PVKR 736

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHAR 632
           LP      E L  L +   D EK+    + L  L ++ L   K L+ +P+L    ++   
Sbjct: 737 LPSNF-KAEYLVELRMENSDLEKLWDGTQPLGSLKEMYLHGSKYLKEIPDLSLAINLERL 795

Query: 633 H---CTSLKTLSNS 643
           +   C SL TL +S
Sbjct: 796 YLFGCESLVTLPSS 809


>gi|357500609|ref|XP_003620593.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355495608|gb|AES76811.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 1196

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 232/737 (31%), Positives = 359/737 (48%), Gaps = 131/737 (17%)

Query: 1   MASSS-SSINMIPHPK---HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRG 55
           MASSS SSI M+   +   +DVF++FRG D R+NF  +L  AL    I  F DD  L +G
Sbjct: 1   MASSSNSSIAMVTSRRRNHYDVFITFRGDDTRNNFTGYLLDALKTNGIYAFRDDTNLQKG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
             I P L  AIEGS++ + +FS  YASS WCL EL KI E  +   + ++PVFY VDPS+
Sbjct: 61  ESIGPELLRAIEGSQVFVAVFSRNYASSTWCLQELEKICECVHVSRKHILPVFYDVDPSE 120

Query: 116 AGYCPSL---------------------------------GWMGIFDIPTSESV-LIEGN 141
                 +                                 GW  + D P S  + +I   
Sbjct: 121 VRKQSGIYGEAFTIHEQTFQQDSQMVSRWREALKQVGSIAGW-DLCDKPQSAEIRMIVQT 179

Query: 142 VNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIAS 200
           + +I +  S     D    LV + S I+ ++S L   S +    +GI G+GGIGKTT++ 
Sbjct: 180 IMNILECKSSWVSKD----LVAINSPIEALQSHLHLDSVDGVRAIGICGMGGIGKTTLSM 235

Query: 201 AIYSNISSHFEGSYFMQNIRDESE--------------KVGGLANIHL-------NFERR 239
           A+Y  IS  F GS F++++  +                +  G+ + H+       N  + 
Sbjct: 236 ALYDQISHRFSGSCFIEDVAKKFRLHDGPLDAQKEILLQTVGIEDHHICNRHRATNLIQS 295

Query: 240 RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEV 299
           RL R + L++  ++  ++Q++ +    +    GSR+II +RD  +L+ +    V  V++V
Sbjct: 296 RLRRERALLILDNVDRVEQLEKIGVHRECLGVGSRIIIISRDEHILEEYG---VDVVYKV 352

Query: 300 KELSYNDSLTLFSRNAFGQNHPAA-GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEW 358
             L +N++  LF R AF +       +  L   ++ YANG+PLA++VLGS+L G +  EW
Sbjct: 353 PLLDWNEAHMLFCRKAFKEEKIIMRNYESLVYEILDYANGLPLAIKVLGSFLFGRNVTEW 412

Query: 359 ESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA 418
           +SA+ +L+  P  D+  VL++S+DGL + E+ IFLD ACFF    +    N L+ CRF A
Sbjct: 413 KSALTRLRESPDNDVMDVLQLSFDGLKETEKEIFLDIACFFNRKSEKYAKNILNCCRFHA 472

Query: 419 KIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
            IG+  L+ KSL+ I+   + MH LL+E+G +IV+  S K+P K SRLW  E +Y V+ E
Sbjct: 473 DIGLRVLIDKSLMNINGQNLEMHSLLEELGRKIVQNSSSKEPRKWSRLWSTEQLYNVMLE 532

Query: 479 NTSLPTGINLDSLKELYLGGCSNLKRF----PEISCNIEDL----DLKETAI-------- 522
           N       N  +  + Y     ++K       E+  N+E L    +L+   I        
Sbjct: 533 NMVKLLFSNKKTYFQFYKQHEKHVKALVLNDEEVGLNVEHLSKMSNLRLLIIMWGVNISG 592

Query: 523 -------------------EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
                              + LPS+  + + LV+L L + S +K +  +   L +LR L+
Sbjct: 593 SLLSLSNKLRYVQWTGYPFKYLPSNF-HPNELVELIL-HSSNIKQLWRKKKYLPNLRGLD 650

Query: 564 L-----------------------SGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSS 599
           L                        GC+ L +L   IG L +L YLNL + K+   IP++
Sbjct: 651 LRYSKKLVKIVDFGEFPNLEWLNLEGCISLLELDPSIGLLRNLVYLNLKDCKNLVSIPNN 710

Query: 600 MKQLSKLSDLRLQNCKR 616
           +  LS L  L + NC +
Sbjct: 711 IFGLSSLKYLYMWNCHK 727



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 99/236 (41%), Gaps = 54/236 (22%)

Query: 468 HPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKET-AIEELP 526
           H  +I Q+  +   LP    LD      L    +   FP    N+E L+L+   ++ EL 
Sbjct: 629 HSSNIKQLWRKKKYLPNLRGLDLRYSKKLVKIVDFGEFP----NLEWLNLEGCISLLELD 684

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVS------------------------------------ 550
            SIG L  LV L+L +C  L S+                                     
Sbjct: 685 PSIGLLRNLVYLNLKDCKNLVSIPNNIFGLSSLKYLYMWNCHKAFTNQRDLKNPDISESA 744

Query: 551 --------SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
                   S L +L  LR +N+S C +L ++   I  L  LE LNL   +F  +PS +++
Sbjct: 745 SHSRSYVLSSLHSLYCLREVNISFC-RLSQVSYAIECLYWLEILNLGGNNFVTLPS-LRK 802

Query: 603 LSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFN 658
           LSKL  L L++CK L+SLP+LP  ++I   H  +     +   L TR      IFN
Sbjct: 803 LSKLVYLNLEHCKLLESLPQLPFPTNIGEDHRENNNKFHD---LFTRKVTQLVIFN 855


>gi|351720806|ref|NP_001235397.1| L33 protein [Glycine max]
 gi|12056930|gb|AAG48133.1|AF322633_1 putative resistance protein [Glycine max]
          Length = 522

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 196/535 (36%), Positives = 290/535 (54%), Gaps = 72/535 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA S  S + + H + DVFLSFRG+D R  FV +L  AL  +   TF  +KL RG EI+ 
Sbjct: 1   MAGSERSSSRVWHYEFDVFLSFRGEDTRLGFVGNLYKALTEKGFHTFFREKLVRGEEIAA 60

Query: 61  S---LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG 117
           S   +  AI+ S++ +V+FS+ YASS  CL EL+ IL       + V+PVFY VDPSD G
Sbjct: 61  SPSVVEKAIQHSRVFVVVFSQNYASSTRCLEELLSILRFSQDNRRPVLPVFYYVDPSDVG 120

Query: 118 -----YCPSLG---------------WMGIFDIPTS------------ESVLIEGNVNDI 145
                Y  +L                W        +            E  LIE  V  +
Sbjct: 121 LQTGMYGEALAMHEKRFNSESDKVMKWRKALCEAAALSGWPFKHGDGYEYELIEKIVEGV 180

Query: 146 SKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGS-TEFNTVGIWGIGGIGKTTIASAIYS 204
           SKK+         ++ VG++  + E+   L + S +  + +GI+G+GGIGKTT+A A+Y 
Sbjct: 181 SKKI---------NRPVGLQYRMLELNGLLDAASLSGVHLIGIYGVGGIGKTTLARALYD 231

Query: 205 NISSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRM 244
           +++  F+   F+  +R+ + K G             G  +I L          ++RL   
Sbjct: 232 SVAVQFDALCFLDEVRENAMKHGLVHLQQTILAETVGEKDIRLPSVKQGITLLKQRLQEK 291

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           +VL+V  D+ + +Q+  L+G    F PGSRVIITTRD QLL++H    V  ++EV+ L+ 
Sbjct: 292 RVLLVLDDINESEQLKALVGSPGWFGPGSRVIITTRDRQLLESHG---VEKIYEVENLAD 348

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
            ++L L    AF  +     F+      + YA+G+PLAL+V+GS L G    EW+  ++ 
Sbjct: 349 GEALELLCWKAFKTDKVYPDFINKIYRALTYASGLPLALEVIGSNLFGREIVEWQYTLDL 408

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF--SAKIGI 422
            +++   DIQK+LK+S+D LD+ E+++FLD ACFFKG     V + +   R+  S K  I
Sbjct: 409 YEKIHDKDIQKILKISFDALDEHEKDLFLDIACFFKGCKLAQVESIVSG-RYGDSLKAII 467

Query: 423 SRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
             L+ K+L+ I  + ++ MHDL+Q+MG EIVRQES K PG  SRLW PED+  VL
Sbjct: 468 DVLLEKTLIKIDEHGRVKMHDLIQQMGREIVRQESPKHPGNCSRLWSPEDVADVL 522


>gi|15223549|ref|NP_176043.1| white rust resistance 4 protein [Arabidopsis thaliana]
 gi|12323031|gb|AAG51508.1|AC058785_11 disease resistance protein [Arabidopsis thaliana]
 gi|48310570|gb|AAT41840.1| At1g56510 [Arabidopsis thaliana]
 gi|110741855|dbj|BAE98869.1| hypothetical protein [Arabidopsis thaliana]
 gi|332195280|gb|AEE33401.1| white rust resistance 4 protein [Arabidopsis thaliana]
          Length = 1007

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 219/763 (28%), Positives = 364/763 (47%), Gaps = 131/763 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS     + +++VF SF G DVR  F+SHL        I  F D+ + R   I+P
Sbjct: 1   MASSSSSPR---NWRYNVFTSFHGPDVRIKFLSHLRQQFVYNGITMFDDNGIERSQIIAP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------ 114
           +L  AI  S+++IV+ S+ YASS WCL+EL++IL+ K   GQIV+ VFY VDPS      
Sbjct: 58  ALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKCKEYIGQIVMTVFYEVDPSHVRKQT 117

Query: 115 -DAG-----------------YCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSD 151
            D G                 +  +L ++G      F     E+ +IE    D+S K+ +
Sbjct: 118 GDFGIAFKETCAHKTEEERSKWSQALTYVGNIAGEDFIHWKDEAKMIEKIARDVSTKI-N 176

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + P  + D +VG+E  +KE+ S L         VGI G  GIGK+TIA A++S  SS F+
Sbjct: 177 VTPCRDFDDMVGLERHLKEMVSLLDLDKEGVKMVGISGPAGIGKSTIAKALHSRHSSTFQ 236

Query: 212 GSYFMQNIRDESE---------------------KVGGLANIHLNFERRRLSRMKVLIVF 250
            + F+ N+ +  +                     K  GL   HL+  + RL   KVLI+ 
Sbjct: 237 HNCFVDNLWENYKICTGEHGVKLRLHEQFVSKILKQNGLELTHLSVIKDRLQDKKVLIIL 296

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+  L Q++ L   +  F PGSRVI+TT + ++L+ H    +G +++V   S +++LT+
Sbjct: 297 DDVESLAQLETL-ADMTWFGPGSRVIVTTENKEILQQHG---IGDIYQVGYPSESEALTI 352

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
           F  +AF Q  P  GF++L++ V++  + +PLAL VLGS L   S+ +WE  + +L+    
Sbjct: 353 FCLSAFKQASPPDGFMDLADEVVRICDKLPLALCVLGSSLLRKSQTDWEDELPRLRNC-- 410

Query: 371 MD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
           +D I+ VLKV ++ L++++Q +FL    FF       V   L     + ++G+  L  + 
Sbjct: 411 LDGIESVLKVGFESLNEKDQALFLYITVFFNYECADHVTLMLAKSNLNVRLGLKNLANRY 470

Query: 430 LVTISNN---KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT------ 480
           L+ I ++   ++ +H LL+ M  ++  ++    P K   L   E I  VL E T      
Sbjct: 471 LIHIDHDQKKRVVVHRLLRVMAIQVCTKQK---PWKSQILVDAEKIAYVLEEATGNRSIK 527

Query: 481 ------------------------------------------SLPTGINLDSLKELYLGG 498
                                                      +P  I       L+   
Sbjct: 528 GVSFDTAEIDELMISPKAFEKMCNLLFLKVYDAGWHTGKRKLDIPEDIKFPRTIRLFHWD 587

Query: 499 CSNLKRFPE--ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
             + KR P    + N+ +++++++ +++L      L+ L  +DL+  S L  +   L N 
Sbjct: 588 AYSGKRLPSSFFAENLVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPD-LSNA 646

Query: 557 KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
            +L  L +  C  L +LP  IGNL  L ++ +   +  ++  S+  L+ L+ L +  C R
Sbjct: 647 TNLEDLYVGSCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNMNKCSR 706

Query: 617 LQSLPELP--------CGSSIHA-----RHCTSLKTLSNSSTL 646
           L+  P++P         G+++        HC+ L+T+  S ++
Sbjct: 707 LRRFPDIPTSIEDVQVTGTTLEELPASLTHCSGLQTIKISGSV 749



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 28/162 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P+ INL SL  L +  CS L+RFP+I  +IED+ +  T +EELP+S           LT
Sbjct: 687 IPSLINLTSLTFLNMNKCSRLRRFPDIPTSIEDVQVTGTTLEELPAS-----------LT 735

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS-M 600
           +CSGL+++              +SG + L+    E+    S+ ++N++    E I    +
Sbjct: 736 HCSGLQTI-------------KISGSVNLKIFYTELP--VSVSHINISNSGIEWITEDCI 780

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLS 641
           K L  L DL L  CKRL SLPELP    I  A  C SL++L+
Sbjct: 781 KGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSLESLN 822


>gi|227438243|gb|ACP30611.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1050

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 238/716 (33%), Positives = 367/716 (51%), Gaps = 109/716 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIET-FIDDKLNRGNEIS 59
           MASSS S ++       VF SFRGKDVR  F+SHL  AL R+ + T F D ++ RG+ IS
Sbjct: 1   MASSSRSRSL------QVFPSFRGKDVRQTFLSHLIVALDRKLVCTVFKDSQIERGHSIS 54

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
           P+L  AI  S++SIV+ S+ YASS WCL+EL++IL+ + + GQIV+ +FY +DPSD  Y 
Sbjct: 55  PALVQAIRDSRVSIVVLSKNYASSSWCLDELLEILKCREELGQIVMTIFYDLDPSDVRYQ 114

Query: 119 -----------CP------SLGW-MGIFDIPT----------SESVLIEGNVNDISKKLS 150
                      C       +  W + + ++            SE+ +++  VND+S KL+
Sbjct: 115 IGEFGKAFEKTCEKKTADVTKQWGLALTEVANIHGHHSRKWDSEAHMVDDFVNDVSCKLN 174

Query: 151 -DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                S+  D L+G+E+ I  + S L   + +   VGIWG  GIGK+TIA A++  +S  
Sbjct: 175 CSQSSSEEFDDLIGIEAHIANMVSLLSMDAEQVLMVGIWGPSGIGKSTIARALFGRLSYR 234

Query: 210 FEGSYFMQ--------------NIRDESEKV----GGLANI---------HLNFERRRLS 242
           F+   F+               N+ D   K+      L+ I         HL     RL 
Sbjct: 235 FQRCVFIDRSFIDKTLENFRRINLDDYGVKLQLQEKFLSEILDHKDVKIDHLGVLGGRLQ 294

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             KVLIV  D+ D   +D L+G+   F  GSR+I+ T+DV LL++H   R   V+EV   
Sbjct: 295 NHKVLIVLDDVDDRLLLDALVGQTLWFGSGSRIIVVTKDVHLLRSHGIER---VYEVGFP 351

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           S + +L +F ++AF +N PA GF++L+  V K A  +PL L +LGS L+G ++E+W   +
Sbjct: 352 SEDQALEMFCQSAFKRNSPADGFMDLAVEVSKLAGNLPLGLNLLGSSLRGRNKEDWIDML 411

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
            +L+   + DI++ L+  YD L +  + +FL  AC F G     +   L         G+
Sbjct: 412 PELRTCLNGDIERTLRFGYDRLKETHKRLFLHIACLFNGEKVDSLKWLLADSDVDVNTGL 471

Query: 423 SRLVGKSLVTISNN---KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
             LV +SL+ I+ +    + MH+LLQEMG  +V  +S  +PG+R  L   ++I  VL +N
Sbjct: 472 RVLVERSLIRITTHLCKTVEMHNLLQEMGRGMVSAQSFDEPGERQFLTDSKNICDVLEDN 531

Query: 480 TS----LPTGINLDSLKELY------LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
           +     L    N+  + EL+        G  NL RF +I  N   L+  E     LP  I
Sbjct: 532 SGTKAVLGISWNISEIAELFTLDEDAFKGMRNL-RFLKIYKN--PLERNEETKLYLPQGI 588

Query: 530 GNLSR-----------------------LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
            +LSR                       LV+L + + S L+ +      LK L+ ++L  
Sbjct: 589 QSLSRRLRLLHWDAYPMSRMPSDFSPAYLVELGMID-SELEKMWEGPQPLKYLKNMSLWR 647

Query: 567 CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             KL+++P ++    +LE L LA+ +  E +PSS++ L  L  L ++ C +L+ LP
Sbjct: 648 SKKLKEVP-DLSKAPNLEELYLADCQSLEMLPSSIRYLKNLKTLNMEECSKLEFLP 702



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 105/188 (55%), Gaps = 14/188 (7%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT INL+SL  L L GCS ++ FP+IS NI  L L+ TAIEE+P  I  ++ L  L ++
Sbjct: 701 LPTNINLESLSNLTLYGCSLIRSFPDISHNISVLSLENTAIEEVPWWIEKMTGLTGLFMS 760

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKL-----EKLPEEIGNLESLEYLNLAEKDFEKI 596
            C  L  +S  +  LK L  ++ S C  L     +  P+ +     +  L++++  F ++
Sbjct: 761 GCGKLSRISPNISKLKHLEDVDFSLCYALTEDSWQDDPQVVPAPNPIGDLDMSDNTFTRL 820

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTLSNSSTLLTRSSKHW 654
           P S+  + K  +L + NC++L SLPEL   S   + A+ C SL+++S+    L R+ +  
Sbjct: 821 PHSLVSI-KPQELNIGNCRKLVSLPELQTSSLKILRAQDCESLESISH----LFRNPE-- 873

Query: 655 DIFNFSNC 662
            I +F NC
Sbjct: 874 TILHFINC 881



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 7/136 (5%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L  LK + L     LK  P++S   N+E+L L +  ++E LPSSI  L  L  L++  CS
Sbjct: 637 LKYLKNMSLWRSKKLKEVPDLSKAPNLEELYLADCQSLEMLPSSIRYLKNLKTLNMEECS 696

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ + + + NL+SL  L L GC  +   P+   N+  L   N A    E++P  +++++
Sbjct: 697 KLEFLPTNI-NLESLSNLTLYGCSLIRSFPDISHNISVLSLENTA---IEEVPWWIEKMT 752

Query: 605 KLSDLRLQNCKRLQSL 620
            L+ L +  C +L  +
Sbjct: 753 GLTGLFMSGCGKLSRI 768


>gi|4588062|gb|AAD25972.1|AF093645_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1304

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 176/527 (33%), Positives = 281/527 (53%), Gaps = 58/527 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++     P  +++VFLSFRG D R  F   L   LCR KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGSFPSVEYEVFLSFRGPDTREQFTDFLYHFLCRYKIHTFRDDDELRKGEEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGW---MGIFDIPT----SESVLIEGNV-------NDISKKLSDLFPSD----- 156
              C    +      FD  T     +++   G++       ND    ++D   +D     
Sbjct: 166 QTGCYKKAFRKHANKFDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADEVLADIWSHI 225

Query: 157 -------NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                    D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ ISS 
Sbjct: 226 SKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSC 285

Query: 210 FEGSYFMQNIRDESEKVGGLANIH--LNFE---------------------RRRLSRMKV 246
           F+   F+ NIR+  ++  G+  +   L +E                     + R+SR K+
Sbjct: 286 FDRCCFIDNIRETQDQKDGVVVLQKKLVYEILRIDSGSVGFNNDSGGRKMIKERVSRFKI 345

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L+V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV  +S   
Sbjct: 346 LVVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGSMSKPR 404

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           SL LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       W+  + +L+
Sbjct: 405 SLELFSKHAFKKNTPPSDYETLANDVVDTTAGLPLTLKVIGSILFKQEIGVWKDTLQQLR 464

Query: 367 RMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           +  ++D +   LK+SYD L  E + IFLD ACFF G ++ +       C F     I  L
Sbjct: 465 KTLNLDEVYDRLKISYDALKPEAKEIFLDIACFFIGKNKEVPYYMWTDCNFYPASNIIFL 524

Query: 426 VGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           + + ++ +  ++K  MHD L++MG EIVR+E I+ P KRSR+W  E+
Sbjct: 525 IQRCMIQVGDDDKFKMHDQLRDMGREIVRREDIR-PWKRSRIWSREE 570



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 43/173 (24%)

Query: 490  SLKELYLGGCSNLKRFPEISC-----NIEDLDLKETAI--EELPSSIGNLSRLVDLDLT- 541
            S+ EL +  C  L+  P I        +++LDL    I  EE   +IG+L  LV L+L  
Sbjct: 998  SMAELTIRDCPRLEVGPMIRSLPKFPMLKNLDLAVANITKEEDLDAIGSLEELVSLELKL 1057

Query: 542  --NCSGLKSVSSR---------------------LCNLKSLRRLNLSGCLKLEKLPEEIG 578
                SG++ + S                      L  LKSL+RL L GC  L +L     
Sbjct: 1058 DDTSSGIERIVSLSKLQKLTTLVVKVPSLREIEGLAELKSLQRLTLEGCTSLGRL----- 1112

Query: 579  NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL------QSLPELP 624
             LE L+ L++    D  ++  ++  +  L +L +++C RL      QSLP  P
Sbjct: 1113 RLEKLKELDIGGCPDLTELVQTVVAVPSLVELTIRDCPRLEVGPMIQSLPNFP 1165



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 30/164 (18%)

Query: 486  INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
            + L+ LKEL +GGC +L                     EL  ++  +  LV+L + +C  
Sbjct: 1112 LRLEKLKELDIGGCPDLT--------------------ELVQTVVAVPSLVELTIRDCPR 1151

Query: 546  LK--SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD----FEKIPS 598
            L+   +   L N   L  L LS   +  E   E +G+LE L  L L   D     E+I S
Sbjct: 1152 LEVGPMIQSLPNFPMLNELTLSMVNITKEDELEVLGSLEELRSLELKLDDTCSSIERI-S 1210

Query: 599  SMKQLSKLSDLRLQ--NCKRLQSLPELPCGSSIHARHCTSLKTL 640
            S+ +L KL+ L ++  + + ++ L EL     ++ + CTSL+ L
Sbjct: 1211 SLSKLQKLTTLEVEVPSLREIEGLAELKSLYELYLQGCTSLERL 1254


>gi|4588064|gb|AAD25973.1|AF093646_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1294

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 187/565 (33%), Positives = 291/565 (51%), Gaps = 77/565 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++     P  ++DVFLSFRG D R  F   L   LC  KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGSFPSVEYDVFLSFRGPDTRKQFTDFLYHFLCYYKIHTFRDDDELRKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGW---MGIFDIPTSESVLIEGNVNDISKKLSDL----FPSDNK---------- 158
              C    +      FD  T +      N  D  KK+ DL       D++          
Sbjct: 166 QTGCYKKAFRKHANKFDGQTIQ------NWKDALKKVEDLKGWHIGKDDEQGAIADKVSA 219

Query: 159 ---------------DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIY 203
                          D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y
Sbjct: 220 DIWSHISKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVY 279

Query: 204 SNISSHFEGSYFMQNIRDESEKVGGL---------------ANIHLNFE-------RRRL 241
           + ISS F+   F+ NIR+  EK G +                ++  N +       + R+
Sbjct: 280 NKISSCFDCCCFIDNIRETQEKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIKERV 339

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
           SR K+L+V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV  
Sbjct: 340 SRFKILVVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGS 398

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
           +S   SL LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       WE  
Sbjct: 399 MSKPRSLELFSKHAFKKNTPPSYYETLANDVVDTTAGLPLTLKVIGSLLFKQEIAVWEDT 458

Query: 362 VNKLKRMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
           + +L+R  ++D +   LK+SYD L+ E + IFLD ACFF G ++         C F    
Sbjct: 459 LEQLRRTLNLDEVYDRLKISYDALNPEAKEIFLDIACFFIGQNKEEPYYMWTDCNFYPAS 518

Query: 421 GISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED-IYQVLNE 478
            I  L+ + ++ +  +++  MHD L++MG EIVR+E +  P KRSR+W  E+ I  +LN+
Sbjct: 519 NIIFLIQRCMIQVGDDDEFKMHDQLRDMGREIVRREDVL-PWKRSRIWSAEEGIDLLLNK 577

Query: 479 N-------TSLPTGINLDSLKELYL 496
                    S+P G+  +   E +L
Sbjct: 578 KGSSKVKAISIPWGVKYEFKSECFL 602



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 60/210 (28%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
            L SL++LYL GC++L R P                         L +L +LD+  C  L 
Sbjct: 1085 LKSLQDLYLEGCTSLGRLP-------------------------LEKLKELDIGGCPDLT 1119

Query: 548  SVSSRLCNLKSLRRLNLSGCLKLE---------KLP------------------EEIGNL 580
             +   +  + SLR L +  C +LE         K P                  E +G+L
Sbjct: 1120 ELVQTVVAVPSLRGLTIRDCPRLEVGPMIQSLPKFPMLNELTLSMVNITKEDELEVLGSL 1179

Query: 581  ESLEYLNLAEKD----FEKIPSSMKQLSKLSDL--RLQNCKRLQSLPELPCGSSIHARHC 634
            E L+ L L   D     E+I S + +L KL+ L   + + + ++ L EL     ++   C
Sbjct: 1180 EELDSLELTLDDTCSSIERI-SFLSKLQKLTTLIVEVPSLREIEGLAELKSLRILYLEGC 1238

Query: 635  TSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
            TSL+ L      L  S K+ ++ +   C +
Sbjct: 1239 TSLERLWPDQQQLG-SLKNLNVLDIQGCKS 1267


>gi|297741028|emb|CBI31340.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 157/368 (42%), Positives = 224/368 (60%), Gaps = 30/368 (8%)

Query: 133 SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGG 192
           +E +LI+  V  + KKL + + SD ++ LVG++S I+++   L   S +   VGI G+GG
Sbjct: 44  NEPLLIKEIVIKLLKKLLNTWTSDTEENLVGIQSRIQKLRMLLCLQSDDVRMVGICGMGG 103

Query: 193 IGKTTIASAIYSNISSHFEGSYFM--------------------QNIRDESEKVGGLANI 232
           IGKTT+A AIYS +S+ FE   F+                    Q +++E+ K+ G  +I
Sbjct: 104 IGKTTLARAIYSQVSNQFEACSFLEIANDFKEQDLTSLAEKLLSQLLQEENLKIKGSTSI 163

Query: 233 HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
                + RL   KVL+V  ++ +L  ++ L G  D F  GSR+I+TTRD +LL  H+   
Sbjct: 164 -----KARLHSRKVLVVLDNVNNLTILEHLAGNQDWFGQGSRIIVTTRDQRLLIQHKVD- 217

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
               +EV E + +++      ++           ELS  +I YA G+PLAL+VLGS L G
Sbjct: 218 ---YYEVAEFNGDEAFEFLKHHSLKYELLENDLQELSREIIFYAKGLPLALRVLGSLLFG 274

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
           M+++EW   + KLK  P+++IQ+VL++SYD LDDEE+NIFLD ACFFKG D+  V+  L 
Sbjct: 275 MNKDEWRDYLVKLKSTPNIEIQEVLRLSYDRLDDEEKNIFLDIACFFKGEDKDHVVEILK 334

Query: 413 ACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
            C FSAK GI  L+ KSL+TI+  NK+ MHDL+QEMG  IVRQE  K+P +RSRLW  ED
Sbjct: 335 GCGFSAKCGIKTLINKSLITINFANKLEMHDLIQEMGKGIVRQECPKEPERRSRLWEHED 394

Query: 472 IYQVLNEN 479
           I+ VL  N
Sbjct: 395 IFDVLKRN 402


>gi|357474813|ref|XP_003607692.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508747|gb|AES89889.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1181

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 242/741 (32%), Positives = 346/741 (46%), Gaps = 126/741 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF++FRG+D R NF  HL AAL R+ I  F DD KL +G  I+P L  AIEGS++ I 
Sbjct: 78  YDVFVTFRGEDTRFNFTDHLFAALQRKGIFAFRDDTKLQKGESIAPELIRAIEGSQVFIA 137

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL------------ 122
           + S+ YASS WCL EL  IL     +G+ V+PVFY VDPS+  +   +            
Sbjct: 138 VLSKNYASSTWCLRELEYILHYSQVFGRRVLPVFYDVDPSEVRHQKGIYGEAFSKHEQTF 197

Query: 123 ---------------------GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                GW  + D P  E   I+  V++I   L   + S  K +L
Sbjct: 198 QHDSHVVQRWREALTQVGNISGW-DLRDKPQYEE--IKKIVDEILNILGHNYSSLPK-EL 253

Query: 162 VGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN-- 218
           VG+ S I ++ + LL  S +    VGI G+GGIGKTT+A+A+Y  IS  F+   F+ +  
Sbjct: 254 VGMNSHIDKVANLLLLDSIDDVRVVGICGMGGIGKTTLATALYGQISHQFDARCFIDDLS 313

Query: 219 -IRDESEKVGGLANI---HLNFERRRLSRMKVLIVFYDLTDLK----------------- 257
            I     +VG    I    L  E  +L  +      Y  TDL                  
Sbjct: 314 KIYRHDGQVGAQKQILHQTLGVEPFQLCNL------YHTTDLMRRRLRRLRVLIIVDNVD 367

Query: 258 ---QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRN 314
              Q+D L    +    GSR+II + D  +LK +    V  V+ V  L++ +SL LFS  
Sbjct: 368 KVGQLDKLGVNREWLGAGSRIIIISGDEHILKEYG---VDVVYRVPLLNWTNSLQLFSLK 424

Query: 315 AFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQ 374
           AF   H  + + EL+  ++ YANG+PLA+ VLGS L   S  EW S + KLK  PH DI 
Sbjct: 425 AFKLYHIISDYEELTYDILNYANGLPLAITVLGSSLFSRSISEWRSELTKLKVSPHKDIM 484

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            VL++S  GL + E+ IFL  ACFF G ++  V N L+ C F A IG+  LV  SL+ IS
Sbjct: 485 DVLQLSLIGLMEMEKEIFLHIACFFNGREEDYVKNVLNYCGFHADIGLRVLVDNSLIHIS 544

Query: 435 N-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKE 493
           + +KI MH L + +G  IV + S     K SRLW  E  Y V++ N      IN++++  
Sbjct: 545 DESKIEMHGLFEVLGKNIVHEIS----RKWSRLWLHEQFYNVVSNNME----INVEAVV- 595

Query: 494 LYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           LY  G        E    +  L+   LK   +    + + N  R ++ +      +    
Sbjct: 596 LYGPGNEKGILMAEALSKMNSLELLILKNVKVSGSLNYLSNKLRYLEWEAEKGILMAEAL 655

Query: 551 SRLCNLK--SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS--------- 599
           S++ +L+   L+++ +SG L        + N   L YL   E  F  +PSS         
Sbjct: 656 SKMNSLELLILKKVKVSGSLNY------LSN--KLRYLEWDEYPFLYLPSSSQLDELSEL 707

Query: 600 -------------MKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNS 643
                         K L  L +L L   K L ++P   E P    ++   C SL  +++S
Sbjct: 708 ILVGSSITQLWKDKKYLPNLRNLDLSCSKNLATMPHFAEFPNLKRLNLEGCVSLVQINSS 767

Query: 644 STLLTRSSKHWDIFNFSNCSN 664
             LL    +     N  NC N
Sbjct: 768 IGLL----RELVFLNLKNCKN 784



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 40/193 (20%)

Query: 472 IYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE-TAIEELPSSIG 530
           I Q+  +   LP   NLD      L    +   FP    N++ L+L+   ++ ++ SSIG
Sbjct: 714 ITQLWKDKKYLPNLRNLDLSCSKNLATMPHFAEFP----NLKRLNLEGCVSLVQINSSIG 769

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC----------------------- 567
            L  LV L+L NC  L  + + +  L SL+   + GC                       
Sbjct: 770 LLRELVFLNLKNCKNLICIPNEISGLTSLKYFTICGCSNTFKNSKAHGYFSSCLLPSLPS 829

Query: 568 -----------LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
                        L ++P+ +G+L  LE LNL   +F  +PS ++  S+L  L L++CK+
Sbjct: 830 VSCLSEIDISFCNLSQIPDALGSLTWLERLNLRGNNFVTLPS-LRDHSRLEYLNLEHCKQ 888

Query: 617 LQSLPELPCGSSI 629
           L SLPELP  ++I
Sbjct: 889 LTSLPELPLPAAI 901


>gi|357494167|ref|XP_003617372.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355518707|gb|AET00331.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1120

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 226/689 (32%), Positives = 340/689 (49%), Gaps = 91/689 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D RHNF+ +L  AL +  I  F DDK L  G +ISP+L  AIE SKIS++
Sbjct: 82  YDVFLSFRGEDTRHNFIGYLRDALRKRGINPFFDDKNLRIGEDISPALLKAIEESKISVI 141

Query: 75  IFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSDA-----GYCPSL-GWMGI 127
           +FSE YASSRWCL ELVKI++  K    Q   P+FY  D SD       Y  ++      
Sbjct: 142 VFSENYASSRWCLGELVKIIKCMKRNNKQTTFPIFYCADLSDVRNERNSYGEAMVAHENR 201

Query: 128 F-----DIPTSESVLIEGNVNDISKKLSDLFPSDNK---DQLVGVESIIKEIESQLLSGS 179
           F     +I   ++ L E   +     + + +P       +  VG++  I+E++S LL   
Sbjct: 202 FGKDSENIKACKAALSEA-ADLKGHHIHNWYPPKPSLVGENPVGLDQHIEEVKS-LLDMK 259

Query: 180 TEFNTVGIWGIGGIG---KTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNF 236
              +T+ + GI G+G   KT +A A+Y+ I   FE + F+ N+R++S K+    N     
Sbjct: 260 PNDDTICMLGICGLGGIGKTELAKALYNKIVHQFEAASFIANVREKSNKINAARNRAGKI 319

Query: 237 ER------RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRG 290
            +       +L R KVL+V  D+ +++QI  L G  D F PGS VIITTRD  LL     
Sbjct: 320 SKGIYEIKYKLGRKKVLLVLDDVDEMEQIGNLAGGSDWFGPGSTVIITTRDKGLLVGTHS 379

Query: 291 SRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL 350
             V  ++E+ ELS   SL LF RNAFG+++P  G+   S+  + YA G+PLAL+V+GS L
Sbjct: 380 FVVQSIYEMTELSDQHSLELFCRNAFGKSNPETGYEATSSRAVGYAKGLPLALKVIGSNL 439

Query: 351 KGM-SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
               S + WE A+   +R+P   IQ VLKVSYD L    Q++FLD AC FKG        
Sbjct: 440 ATRKSLKAWEHALKDYERIPRKGIQDVLKVSYDVLQPYAQSVFLDIACCFKGGRIEYFEE 499

Query: 410 FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQE--SIKDPGKRSRLW 467
            L       +   + L   +L     N  T+H+ +  +   ++     SIK      R++
Sbjct: 500 IL------GRQQETLLRSFALELNRKNLTTVHESIGFLKHLVILSALGSIKLESFVQRMF 553

Query: 468 HPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEE 524
            P                    SL+ L L  C   K FP+I   +     + +K T I++
Sbjct: 554 LP--------------------SLEVLDLNLCVKHKHFPDIVNKMNKPLKIYMKNTPIKK 593

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-----LPE---- 575
           LP+SI NL  LV +++     LK + S +  L ++      G  KL +     LP+    
Sbjct: 594 LPNSIDNLIGLVSIEMPYSKNLKYLPSSIFTLPNVVAFKFGGFSKLGESFRRFLPDRQEA 653

Query: 576 -EIGNLESLEYLN--LAEKDFEKI--------------------PSSMKQLSKLSDLRLQ 612
            E   ++++ + N  L+++D ++I                    P+ +K+   L+ L + 
Sbjct: 654 NESSTVKAMHFGNSGLSDEDIQEILIYFPKLEKLIASDNNLVSLPACIKESDHLTKLDVS 713

Query: 613 NCKRLQSLPELPCGSSIHARHCTSLKTLS 641
            C  LQ +PE    S ++   C  L+ +S
Sbjct: 714 GCNMLQKIPECTNLSILNVHGCVKLEHIS 742


>gi|12324938|gb|AAG52417.1|AC011622_5 putative disease resistance protein; 23468-19973 [Arabidopsis
           thaliana]
          Length = 1063

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 224/714 (31%), Positives = 348/714 (48%), Gaps = 116/714 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F+SHL           F D  + RG  ISP L+  I  S+ISIV
Sbjct: 41  RYRVFTSFHGPDVRKTFLSHLRKQFICNGTTMFDDQAIERGQTISPELTRGIRESRISIV 100

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG----------------- 117
           + S+ YASS WCL+EL++IL+ K   GQIV+ VFY VDPSD                   
Sbjct: 101 VLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQTGDILKVFKKTCSGK 160

Query: 118 -------YCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  +  +L  +G      F    +ES ++E    DIS K++     D +D +VGVE
Sbjct: 161 TEEKRRRWSQALNDVGNIAGEHFLNWDNESKMMEKIARDISNKVNTTISRDFED-MVGVE 219

Query: 166 SIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR---- 220
           + +++I+S L L    E   VGI+G  GIGKTTIA A++S +S  F+ + FM+N+R    
Sbjct: 220 THLEKIQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENLRGSYN 279

Query: 221 ---DE-----------SEKV---GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE             K+    G+   +L+  +  L   KVLI+  D+ DLKQ++ L 
Sbjct: 280 SSLDEYGLKLQLQEQLLSKILNQTGMRVYNLSAIQGMLCDQKVLIILDDVDDLKQLEALA 339

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSRV++TT + +LLK H    + + + V   +  ++  +F R  F Q+ P  
Sbjct: 340 NETKWFGPGSRVVVTTENQELLKQH--DDIKNTYYVDFPTQKEARQIFCRYGFKQSTPQD 397

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR---MPHMDIQKVLKVS 380
           GF  LS  VIK  + +PL L V+G YL+  +E++WE  +++L+        +I++VL+V 
Sbjct: 398 GFENLSERVIKLCSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSVDRNIERVLRVG 457

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKIT 439
           YDGL +++Q +FL  A FF   D   V   L     + ++G+  L  KSL+  S+   I 
Sbjct: 458 YDGLHEKDQLLFLLIAFFFNYKDDDHVKAMLADNNLNVRLGLKTLEYKSLIQRSSGGNIV 517

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-------------TSLPTGI 486
           MH LLQ++G E V+++   +P KR  L    +I  VL  +             +++P G+
Sbjct: 518 MHKLLQQVGREAVQRQ---EPWKRQILIDAHEICNVLETDSGCANVMGISFNVSTIPNGV 574

Query: 487 NLDS-----LKELYLGGCSNLKRFPEISCNIED--------------------------- 514
           ++ +     ++ L        +R   +  N+ D                           
Sbjct: 575 HISAKAFQNMRNLRFLSIYETRRDVNLRVNVPDDMDFPHRLRSLHWEVYPGKSLPSTFRP 634

Query: 515 -----LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
                L+L+   +E+L      L+ L  L+L     LK +   L +  +L+RL+L+GC  
Sbjct: 635 EYLVELNLQNNKLEKLWEGTQPLTNLNKLELCGSLRLKELPD-LSSATNLKRLDLTGCWS 693

Query: 570 LEKLPEEIGNLESLEYL--NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L ++P  +GNL  LE L  NL  +  + +P+    L+ L  LR+  C  L+  P
Sbjct: 694 LVEIPSSVGNLHKLEELEMNLCLQ-LQVVPTHF-NLASLRSLRMLGCWELRKFP 745



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 92/196 (46%), Gaps = 44/196 (22%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +L +L L G   LK  P++S   N++ LDL    ++ E+PSS+GNL +L +L++  C 
Sbjct: 657 LTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPSSVGNLHKLEELEMNLCL 716

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL--------------------- 583
            L+ V +   NL SLR L + GC +L K P    N+ SL                     
Sbjct: 717 QLQVVPTHF-NLASLRSLRMLGCWELRKFPGISTNITSLVIGDAMLEEMLESIRLWSCLE 775

Query: 584 -------------EYLNLAEK---DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
                          + L EK   D E+IP  +K L  L  L +  C +L SLPELP GS
Sbjct: 776 TLVVYGSVITHNFWAVTLIEKMGTDIERIPDCIKDLPALKSLYIGGCPKLFSLPELP-GS 834

Query: 628 --SIHARHCTSLKTLS 641
              +    C SLKT+S
Sbjct: 835 LRRLTVETCESLKTVS 850


>gi|15237452|ref|NP_199463.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|10177588|dbj|BAB10819.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332008010|gb|AED95393.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1353

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 223/717 (31%), Positives = 335/717 (46%), Gaps = 116/717 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVF SF G DVR NF+SHL   L  + + +F D  + R   + P L  AI  S+I++V+
Sbjct: 9   YDVFPSFSGTDVRRNFLSHLLKGL-HKSVNSFRDQNMERSQSLDPMLKQAIRDSRIALVV 67

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY------------C---- 119
           FS+ YASS WCLNEL++I++ K ++GQ+V+P+FY +DPS   +            C    
Sbjct: 68  FSKNYASSSWCLNELLEIVKCKEEFGQMVIPIFYCLDPSHVRHQDGDFGKNFEETCGRNT 127

Query: 120 --PSLGW---------MGIFDIPT--SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               + W         +  FD  T   E+ +IE   ND+S KL     +D+ +  +G+E 
Sbjct: 128 EEEKIQWEKALTDVANLAGFDSVTWDDEAKMIEEIANDVSGKLLSTSSTDSAENSIGIED 187

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ--------- 217
            I  +   L   + E   VGIWG  GIGKTTIA A+++ +S HF  S F+          
Sbjct: 188 HIANMSVLLQLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKSRE 247

Query: 218 -----NIRDESEKVG----------GLANI---HLNFERRRLSRMKVLIVFYDLTDLKQI 259
                N  D + K+           G  +I   HL     RL   K LI+  DL DL  +
Sbjct: 248 TYKGANPDDPNMKLHLQGCFLSEILGKKDIKIDHLGALGERLKHQKTLIIIDDLDDLVVL 307

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           D L+G+ + F  GSR+I+ T + Q L+ H    + H++EV   S   +  +F ++AFG+N
Sbjct: 308 DSLVGKTNWFGCGSRIIVITNNKQFLRAHG---IDHIYEVSLPSKERAQEMFCQSAFGEN 364

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  GF EL   +   A  +PL L V GS L+G  +E W   + +L+     +I++ LKV
Sbjct: 365 SPPEGFEELVVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETLKV 424

Query: 380 SYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKI 438
           SYD + + ++Q +F   AC F       +   L        I +  LV KSL+ + N+ +
Sbjct: 425 SYDAIGNVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRNDHV 484

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--NTSLPTGINLDSLK---- 492
            MH LLQE G  IVR +S  +PG+R  L    D   VL+E   T    GI+LD+ K    
Sbjct: 485 EMHRLLQETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVSEF 544

Query: 493 ---ELYLGGCSNL-----------------------------------KRFPEISC---- 510
              E    G  NL                                    RFP + C    
Sbjct: 545 CVHENAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFP-LKCMPYT 603

Query: 511 ---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
              N+  L++ ++ +E+L     + + L +LD+     LK +   L    ++ +L+   C
Sbjct: 604 FLRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPD-LSKATNIEKLDFGHC 662

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             L +LP  I NL  L  LN+    + E +P+    L  L  L    C +L++ PE 
Sbjct: 663 WSLVELPSSIRNLNKLLELNMEYCGELETLPTGF-NLKSLDYLNFNECWKLRTFPEF 718



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 58/93 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLPTGINL+SL  L L GCS LKRFP+IS NI+ LDL +T IEE+P  I N   L  L +
Sbjct: 810 SLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLTKLTM 869

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             C  LK VS  +  LK L  ++ S C  L ++
Sbjct: 870 KGCRELKCVSLNIFKLKHLGEVSFSNCGALTRV 902



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 50/189 (26%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI--GNLSRL--- 535
           +LPTG NL SL  L    C  L+ FPE + NI +L L ET+IEE PS++   N+  L   
Sbjct: 691 TLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAETSIEEYPSNLYFKNVRELSMG 750

Query: 536 -VDLDLTNCSGLK----------------------SVSSRLCNLKSLRRLNLSGCLKLEK 572
             D D   C G+K                       +SS   NL +L RL++  C  LE 
Sbjct: 751 KADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLDICYCRNLES 810

Query: 573 LPEEIGNLESL---------------------EYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
           LP  I NLESL                     +YL+L +   E++P  ++    L+ L +
Sbjct: 811 LPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLTKLTM 869

Query: 612 QNCKRLQSL 620
           + C+ L+ +
Sbjct: 870 KGCRELKCV 878


>gi|357452803|ref|XP_003596678.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
 gi|355485726|gb|AES66929.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago
           truncatula]
          Length = 861

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 215/719 (29%), Positives = 318/719 (44%), Gaps = 177/719 (24%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           HDVF+SFRG D R+ F+ HL   L R+ I                   SAI  S+     
Sbjct: 35  HDVFISFRGTDTRNTFIDHLYHHLIRKGI-------------------SAIRDSR----- 70

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSES 135
                                  +  Q V+P+FY +DPS      S  + G ++  T + 
Sbjct: 71  -----------------------ELNQTVIPIFYDIDPSYVRSNLSWAFNGDYNSRTKKL 107

Query: 136 VLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGST--------------- 180
                 V+   + +  L P   + + + V+++IK+++ +  SG T               
Sbjct: 108 NYDPDKVSRWERVVIQLSPEFTEIEKI-VQAVIKKLDHKF-SGFTSGLVGMQPRIEELEK 165

Query: 181 ---------EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV---GG 228
                    +F  +GIWG+GG+GKTT A+ +Y  IS  F+   F+ N    + K+   GG
Sbjct: 166 LLKLSLEDDDFRVLGIWGMGGVGKTTHATVLYDRISYQFDARCFIHN----TSKIYMDGG 221

Query: 229 LANIHLNFERRRL----------------------SRMKVLIVFYDLTDLKQIDLLIGRL 266
           +A +     R+ L                      S +KVL+V  ++  L+Q+       
Sbjct: 222 IAAVQKQILRQALDERNLDSHDACEIAGIMVNRLHSGIKVLVVLDNINQLEQL------- 274

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
                   +IIT+RD  +L+ + G+   H  EV  L+ ND+  LF RNAF     +  F+
Sbjct: 275 --------IIITSRDEHILRVY-GADTVH--EVPLLNSNDAYELFHRNAFKGEDQSYDFI 323

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
           EL   V+KYA  +PLA++V+ S+L       W  A+++L+  P   I  VL++S DGL  
Sbjct: 324 ELIPEVLKYAQHLPLAIRVVASFLCTRDATLWIDALDRLRNNPDSKIMDVLQMSVDGLQH 383

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQE 446
           EE+ IFL  ACFFKG  +  V   LDAC    +IGI R++ KSL+TI N +I MHD+LQE
Sbjct: 384 EEKEIFLHIACFFKGEREDYVKRILDACGLYPQIGIQRILEKSLITIKNEEIHMHDMLQE 443

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFP 506
           +G +IVR +  ++PG  SRLW   D Y VL   T      +L  LK + L     L   P
Sbjct: 444 LGKKIVRHQFPEEPGSWSRLWRCNDFYHVLMTKTGTNNVKDLPYLKRMDLSNSKYLIETP 503

Query: 507 EI--SCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVS-SRLCNLKSLRRL 562
           +   +  +E LD    T +  + SSIG+L+ LV L L NCS L  +    + NL S + L
Sbjct: 504 KFFWTPKLERLDFTGCTNLIHVHSSIGHLTELVFLSLQNCSSLVDLDFGSVSNLSSFQVL 563

Query: 563 NLSGCLKLEKL------------------------------------------------- 573
            L GC KLEK+                                                 
Sbjct: 564 RLCGCTKLEKMPDFTGLKFLRNCTNLIVIPDSVNRMISLVTLDFYGCLKLTTLHHKGFCN 623

Query: 574 ----PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS 628
               P+ IG L  LE +NL    F+ +P+    L  LS + L +C  LQ++ + P   S
Sbjct: 624 LHEVPDAIGELRCLERVNLQGNKFDALPNDFYDLKSLSYINLSHCHELQTIRQWPLSPS 682



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           NL S + L L GC+ L++ P+ +  ++ L    T +  +P S+  +  LV LD   C  L
Sbjct: 556 NLSSFQVLRLCGCTKLEKMPDFT-GLKFLR-NCTNLIVIPDSVNRMISLVTLDFYGCLKL 613

Query: 547 KSVSSR-LCNL----------KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----K 591
            ++  +  CNL          + L R+NL G  K + LP +  +L+SL Y+NL+     +
Sbjct: 614 TTLHHKGFCNLHEVPDAIGELRCLERVNLQGN-KFDALPNDFYDLKSLSYINLSHCHELQ 672

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
              + P S    SK  D ++    R +S
Sbjct: 673 TIRQWPLSPSASSKGRDFKMAGGSRHRS 700


>gi|296089535|emb|CBI39354.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 197/495 (39%), Positives = 266/495 (53%), Gaps = 40/495 (8%)

Query: 175 LLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG------- 227
           L  GS +   VGIWG+ GIGKTTIA  IY  I + FEG  F+ N+R+ES K G       
Sbjct: 30  LCIGSLDVRMVGIWGMAGIGKTTIAKVIYERIYTQFEGCCFLSNVREESYKHGLPYLQME 89

Query: 228 -------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSR 274
                        GL N  +NF +  L   KVLI+  D+   +Q++ L G  + F  GSR
Sbjct: 90  LLSQILKERKPNAGLFNKGINFMKDVLHSRKVLIILDDVDQRQQLEDLAGYNNWFGLGSR 149

Query: 275 VIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIK 334
           +IITTRD  LL       V  ++EVKEL  +++L LF   AF   H    F +L    + 
Sbjct: 150 IIITTRDRHLLTCQE---VDAIYEVKELDNDEALKLFCLYAFRHRHGTEDFRQLCGHALD 206

Query: 335 YANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLD 394
           Y +G+PLAL+VLGS L      EWES +NKLK+ P+ ++Q VLK S++GLDD EQNIFLD
Sbjct: 207 YTSGLPLALKVLGSSLYTKGIHEWESELNKLKQFPNKEVQNVLKTSFEGLDDNEQNIFLD 266

Query: 395 TACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQ 454
            A F+KG+D+  V + LD+C F   IGI  L  KSL+TIS NK+ MHDLLQEMG EIVRQ
Sbjct: 267 IAFFYKGHDKDFVGDILDSCGFFFGIGIRNLEDKSLITISENKLCMHDLLQEMGWEIVRQ 326

Query: 455 ESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--SLKEL--YLGGCSNLKRFPEI 508
           +S + PG+RSRL   EDI  VL  NT      GI LD    KEL   +   + +KR   +
Sbjct: 327 KS-EVPGERSRLRVHEDINHVLTTNTGTEAVEGIFLDLSESKELNFSIDAFTKMKRLRLL 385

Query: 509 S-CNIE-DLDLKETAIEELPSSIGNL-SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
             CN++ D  L   + +EL +   ++ +    L   N   L   S  L N  +LR L   
Sbjct: 386 KICNVQIDRSLGYLSKKELIAYTHDVWTERNYLYTQNKLHLYEDSKFLSN--NLRDLYWH 443

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE--- 622
           G   L+  P    + E L  LN+     +++    K   KL  ++L + + L   P+   
Sbjct: 444 G-YPLKSFPSNF-HPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSG 501

Query: 623 LPCGSSIHARHCTSL 637
           +P    +  + CTSL
Sbjct: 502 VPNLRRLILKGCTSL 516



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 3/138 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S  + I+++SL+ L L GCS LK+FPEI  N+E   +L L  + I ELPSSIG L+ LV 
Sbjct: 542 SFSSSIHMESLQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVF 601

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L+L NC  L S+    C L SL  L L GC +L++LP+++G+L+ L  LN      +++P
Sbjct: 602 LNLKNCKKLASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQCLAELNADGSGIQEVP 661

Query: 598 SSMKQLSKLSDLRLQNCK 615
            S+  L+ L  L L  CK
Sbjct: 662 PSITLLTNLQKLSLAGCK 679



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 90/157 (57%), Gaps = 11/157 (7%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
            + LK + L    +L + P+ S   N+  L LK  T++ E+  SIG L +L+ L+L  C 
Sbjct: 479 FEKLKSIKLSHSQHLTKTPDFSGVPNLRRLILKGCTSLVEVHPSIGALKKLIFLNLEGCK 538

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            LKS SS + +++SL+ L LSGC KL+K PE   N+ESL  L L      ++PSS+  L+
Sbjct: 539 KLKSFSSSI-HMESLQILTLSGCSKLKKFPEIQENMESLMELFLDGSGIIELPSSIGCLN 597

Query: 605 KLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLS 641
            L  L L+NCK+L SLP+  C         TSL TL+
Sbjct: 598 GLVFLNLKNCKKLASLPQSFC-------ELTSLGTLT 627



 Score = 38.9 bits (89), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSR 534
            SLP     L SL  L L GCS LK  P+    + C + +L+   + I+E+P SI  L+ 
Sbjct: 611 ASLPQSFCELTSLGTLTLCGCSELKELPDDLGSLQC-LAELNADGSGIQEVPPSITLLTN 669

Query: 535 LVDLDLTNCSGLKSVS 550
           L  L L  C G  S S
Sbjct: 670 LQKLSLAGCKGGDSKS 685


>gi|8843806|dbj|BAA97354.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1152

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 222/681 (32%), Positives = 330/681 (48%), Gaps = 113/681 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA+SSSS N +    +DVF SF G+DVR  F+SHL   L R+ I +F D+++ R   I+P
Sbjct: 1   MATSSSSCNWV----YDVFPSFSGEDVRKTFLSHLQLVLDRKLITSFKDNEIERSQSIAP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L   I+ S+I+IVIFS+ YASS WCLNEL++I+  K   GQ+V+PVFY +DP+      
Sbjct: 57  ELVQGIKDSRIAIVIFSKNYASSSWCLNELLEIVSCKEDKGQLVIPVFYALDPTHVR--- 113

Query: 121 SLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGST 180
                G F +    + L   N  +  K L  +        L  V +I+    +Q  +   
Sbjct: 114 --KQTGDFGMAFERTCL---NKTEDEKNLWRV-------ALTHVANILGYHSAQCRANPD 161

Query: 181 EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRR 240
           ++N           K  +     S I          QNI+ +          HL     R
Sbjct: 162 DYNM----------KLHLQETFLSTILGK-------QNIKID----------HLGALGER 194

Query: 241 LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVK 300
           L   KVL+   DL     ++ L G++  F  GSR+I+ T D  LL +H    + ++++V 
Sbjct: 195 LKHQKVLLFIDDLDQQVVLNALAGQIQWFGSGSRIIVVTNDKHLLISHG---IENIYQVC 251

Query: 301 ELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWES 360
             S   +L +  R AF QN P  GF +L+  V+++A  +PL L VLGSYL+G ++  W  
Sbjct: 252 LPSKELALEMLCRYAFRQNTPPDGFKKLAVEVVRHAGILPLGLNVLGSYLRGRNKRYWMD 311

Query: 361 AVNKLKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFF---KGNDQYLVMNFLDACRF 416
            + +L++     IQK L+V YDGLD+ +++ IF   AC F   K ND  L++   D    
Sbjct: 312 MLPRLRKGLDGKIQKALRVGYDGLDNKKDEAIFRHIACLFNFEKVNDIRLLLADSD---L 368

Query: 417 SAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           +  IG+  LV KSLV + +N + MH LLQEMG EIVR +S  + G+R  L   EDI  VL
Sbjct: 369 NFNIGLENLVDKSLVNVRSNIVEMHCLLQEMGREIVRAQS-NEAGEREFLMDTEDICDVL 427

Query: 477 NEN--TSLPTGINLD--------SLKELYLGGCSNLK-----------------RFPE-- 507
           ++N  T    GI+LD        ++ E    G  NL+                   PE  
Sbjct: 428 DDNIGTKKMLGISLDVDEIDHELNVHEKAFQGMRNLRFLNIYTKALMSGQKIRLHLPENF 487

Query: 508 ----------------ISC--------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
                           + C        N+  L ++E+ +E+L   +G+L+ L D+DL   
Sbjct: 488 DYLPPKLKLLCWDKYPMRCLPSSFRPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKS 547

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQ 602
             LK +   L    +L+ LNL  C  L K+   I NL  L  LN+    + E +P+ +  
Sbjct: 548 KNLKEIPD-LSMATNLKTLNLKYCSSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGI-N 605

Query: 603 LSKLSDLRLQNCKRLQSLPEL 623
           L  L  L L+ C RL+  P++
Sbjct: 606 LKSLHRLDLRGCSRLRMFPDI 626



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 81/155 (52%), Gaps = 14/155 (9%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LP GINL SL  L L GCS L+ FP+IS NI  L L +T+IEE PS++ +L +L DL +
Sbjct: 599 TLPAGINLKSLHRLDLRGCSRLRMFPDISNNISVLFLDKTSIEEFPSNL-HLKKLFDLSM 657

Query: 541 TNCSGLK---SVSSRLCNLKSL--------RRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
              +  K    V    C +K L          L LS    L +LP  I NL+ L  L++ 
Sbjct: 658 QQMNSEKLWEGVQPLTCLMKMLSPPLAKNFNTLYLSDIPSLVELPCGIQNLKKLMELSIR 717

Query: 590 E-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             K+ E +P+       L  L L  C +L+S P++
Sbjct: 718 RCKNLESLPTG-ANFKYLDYLDLSGCSKLRSFPDI 751



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 49/87 (56%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLPTG N   L  L L GCS L+ FP+IS  I  L L  T IEE+PS I N  RL  L +
Sbjct: 724 SLPTGANFKYLDYLDLSGCSKLRSFPDISSTISCLCLNRTGIEEVPSWIENFVRLTYLTM 783

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C+ LK VS  +  LK L + + S C
Sbjct: 784 LECNKLKYVSLNIFKLKHLDKADFSDC 810



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 56/243 (23%)

Query: 467 WHPEDIYQVLNENTSLPT---GI-NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE- 519
           + PE++ ++  + + L     G+ +L  LK++ L    NLK  P++S   N++ L+LK  
Sbjct: 511 FRPENLVKLKMQESELEKLWEGVGSLTCLKDMDLEKSKNLKEIPDLSMATNLKTLNLKYC 570

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           +++ ++ SSI NL++L  L++  C+ L+++ + + NLKSL RL+L GC +L   P+   N
Sbjct: 571 SSLVKISSSIQNLNKLTKLNMEGCTNLETLPAGI-NLKSLHRLDLRGCSRLRMFPDISNN 629

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ--NCKRL-------------------- 617
              +  L L +   E+ PS++  L KL DL +Q  N ++L                    
Sbjct: 630 ---ISVLFLDKTSIEEFPSNL-HLKKLFDLSMQQMNSEKLWEGVQPLTCLMKMLSPPLAK 685

Query: 618 ----------QSLPELPCG-------SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
                      SL ELPCG         +  R C +L++L   +       K+ D  + S
Sbjct: 686 NFNTLYLSDIPSLVELPCGIQNLKKLMELSIRRCKNLESLPTGANF-----KYLDYLDLS 740

Query: 661 NCS 663
            CS
Sbjct: 741 GCS 743



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 5/114 (4%)

Query: 506 PEISCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL 564
           P ++ N   L L +  ++ ELP  I NL +L++L +  C  L+S+ +   N K L  L+L
Sbjct: 681 PPLAKNFNTLYLSDIPSLVELPCGIQNLKKLMELSIRRCKNLESLPTG-ANFKYLDYLDL 739

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           SGC KL   P+      ++  L L     E++PS ++   +L+ L +  C +L+
Sbjct: 740 SGCSKLRSFPDISS---TISCLCLNRTGIEEVPSWIENFVRLTYLTMLECNKLK 790


>gi|449482303|ref|XP_004156242.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1633

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 225/738 (30%), Positives = 348/738 (47%), Gaps = 129/738 (17%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P   +DVF+SFRG+DVRH F  +L  AL R  I+ F+D+K     +    L   I+ S+ 
Sbjct: 12  PKMNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRS 71

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------------D 115
           +IV+ SE YAS++WCL EL KI++S     + V+PVFY +DPS                +
Sbjct: 72  AIVVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFKTSFDEHE 131

Query: 116 AGYCPSL-------------GWM-GIFDIPTSESVLIEGN------VNDISKKLSDLFPS 155
           A     +              W   +  I     V+I  N      VN I+ ++ D +  
Sbjct: 132 ANVLKEIDNQEKEKRLKELQNWKSALKKIGNHTGVVITKNSSEVDIVNKIASQIFDAWRP 191

Query: 156 D----NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
                NK+ LVG+ S +  +   L  G  +   V I G+GGIGKTTIA  ++  I S FE
Sbjct: 192 KLEALNKN-LVGMTSRLLHMNMHLGLGLDDVRFVAIVGMGGIGKTTIAQVVFDCILSKFE 250

Query: 212 GSYFM--------------------QNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFY 251
              F+                    Q    E  ++    N  +   + RLS  KVLIV  
Sbjct: 251 DCCFLTLPGGDSKQSLVSLQREMLSQIFHKEDFRIWH-ENHGVEMIKNRLSGRKVLIVLD 309

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
            + + +Q+++L G ++ F PGSR+IITTR+  LL  H       V+ V+EL ++ +L LF
Sbjct: 310 GIEERRQLEMLAGSIEWFGPGSRIIITTRNKGLL-CHPNYDEMKVYNVEELDHDSALQLF 368

Query: 312 SRNAFGQNHP-AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
            ++AFG NH     F++LSN +++ A  +PLAL+V+GS L G     W   + +L ++  
Sbjct: 369 LKHAFGSNHQNNDSFMDLSNEIVEKAKRLPLALRVIGSSLYGKDITVWRETLKRLIKVDE 428

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
            +   VLK+SYDGL  E Q +FLD  CFF G ++  V+  L++  +S    +  L+ + L
Sbjct: 429 RNFFDVLKISYDGLGVESQQVFLDITCFFNGKNEDRVIEILESFGYSPNSEVQLLMQRCL 488

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGINL 488
           + +S+ KI +HDL+ EMG EIVR+ES+    K+SR+W  ED+Y    E   L    GI L
Sbjct: 489 IEVSHKKILVHDLILEMGREIVRKESLTQAEKQSRIWLHEDLYCRFAEKHDLMHIQGIVL 548

Query: 489 DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE---------------------LPS 527
              KE+      + + F E++  +  L++    ++E                     LP 
Sbjct: 549 SLAKEMEESIELDAESFSEMT-KLRILEISNVELDEDIEYLSPLLRIINWLGYPSKSLPP 607

Query: 528 SI------------GNLSRLVD----------LDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
           +              +L R+ D          +D++N   L+ V+     + +L RL L 
Sbjct: 608 TFQSRYLFELLLPHSHLLRIWDGKKRFPKLKLIDVSNSEHLR-VTPDFSGVPNLERLVLC 666

Query: 566 GCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            C++L ++   I +L  L  L+L    D +  P++++            CK LQ+L    
Sbjct: 667 NCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANIR------------CKNLQTLKLSG 714

Query: 625 CGSSI-----HARHCTSL 637
            G  I     H  H T L
Sbjct: 715 TGLEIFPEIGHMEHLTHL 732



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 18/142 (12%)

Query: 499 CSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL-----KSVS 550
           C  L + P    N   +E L + ET+I  +P SI  +  L +L   +C GL     KS+ 
Sbjct: 784 CKKLDKIPPSLANAESLETLSISETSITHVPPSI--IHCLKNLKTLDCEGLSHGIWKSLL 841

Query: 551 SRL-------CNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
            +          L  L+ LNL GC L  E +PE++    SLE L+L+  +F  +P S+  
Sbjct: 842 PQFNINQTITTGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLPDSLSH 901

Query: 603 LSKLSDLRLQNCKRLQSLPELP 624
           L KL  L L  C  L+ LP+LP
Sbjct: 902 LKKLKTLNLNCCTELKDLPKLP 923



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 26/159 (16%)

Query: 483 PTGINLDSLKELYLGGCSNLKRFP-EISC-NIEDLDLKETAIEELPS------------- 527
           P+  +L+ L  L L GC +LK FP  I C N++ L L  T +E  P              
Sbjct: 676 PSINSLNKLILLDLEGCGDLKHFPANIRCKNLQTLKLSGTGLEIFPEIGHMEHLTHLHLD 735

Query: 528 ---------SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
                    SIG L+ LV LDL++C GL S+   + NLKSL+ L L  C KL+K+P  + 
Sbjct: 736 GSNITHFHPSIGYLTGLVFLDLSSCLGLSSLPCEIGNLKSLKTLLLKYCKKLDKIPPSLA 795

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           N ESLE L+++E     +P S+  +  L +L+  +C+ L
Sbjct: 796 NAESLETLSISETSITHVPPSI--IHCLKNLKTLDCEGL 832


>gi|224116168|ref|XP_002331978.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832102|gb|EEE70579.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1028

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 176/500 (35%), Positives = 266/500 (53%), Gaps = 74/500 (14%)

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIR---DE------------SEKVGGLANI-- 232
           +GGIGKTT+A  +Y      F+GS F+ N+R   DE            SE +   ANI  
Sbjct: 1   MGGIGKTTVARVVYDRFRWQFKGSCFLANVREVFDEKDGPRRLQEQLVSEILMKRANICD 60

Query: 233 ---HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
               +   +R+L R K+LIV  D+ D KQ++ L      F PGSR+IIT+RD Q+L  + 
Sbjct: 61  SSRGIEMIKRKLQRKKILIVLDDVDDRKQLESLAAESKWFGPGSRIIITSRDRQVLTRNG 120

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              V  ++E ++L+ +D+L LFS+ AF  + PA  F+ELS  V+ YANG+PLAL+V+GS+
Sbjct: 121 ---VARIYEAEKLNDDDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSF 177

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           + G S  EW SA+N+L  +P  +I  VL++S+DGL + E+ IFLD ACF KG  +  ++ 
Sbjct: 178 MHGRSILEWGSAINRLNEIPDREIIDVLRISFDGLHELEKKIFLDIACFLKGFKKDRIIR 237

Query: 410 FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
            LD+C F A IG   L+ KSL+++S +++ MH+LLQ MG EIVR ES ++PG+RSRLW  
Sbjct: 238 ILDSCGFHAHIGTQVLIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTY 297

Query: 470 EDIYQVLNENTSL----PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEEL 525
           ED+   L +NT         +++  +KE       N+K F ++S  +  L +    + E 
Sbjct: 298 EDVCLALMDNTGKEKIEAIFLDIPGIKEAQW----NMKAFSKMS-KLRLLKINNVQLSEG 352

Query: 526 PSSIGNLSR--------------------LVDLDLTNCS------GLKSV---------- 549
           P  + N  R                    LV+L + N S      G KS           
Sbjct: 353 PEDLSNKLRFLEWHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGYKSAVKLKIINLSN 412

Query: 550 ------SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
                 S  L  + +L  L L GC+ L ++   +G  + L+Y+NL      +I  S  ++
Sbjct: 413 SLYLSKSPDLTGIPNLESLILEGCISLSEVHPSLGRHKKLQYVNLINCRSIRILPSNLEM 472

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
             L    L  C +L++ P++
Sbjct: 473 ESLKFFTLDGCSKLENFPDI 492



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 5/146 (3%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GCS L+ FP+I  N+     L L  T I EL  SI ++  L  L
Sbjct: 466 LPSNLEMESLKFFTLDGCSKLENFPDIVGNMNCLMKLCLDRTGIAELSPSIRHMIGLEVL 525

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + NC  L+S+S  +  LKSL++L+LSGC +L+ +P  +  +ESLE  +++     ++P+
Sbjct: 526 SMNNCKKLESISRSIECLKSLKKLDLSGCSELKNIPGNLEKVESLEEFDVSGTSIRQLPA 585

Query: 599 SMKQLSKLSDLRLQNCK--RLQSLPE 622
           S+  L  L+ L L   +   L++LPE
Sbjct: 586 SIFLLKNLAVLSLDGLRACNLRALPE 611



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 58  ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-QIVVPVFYLVDPS 114
           I   L  AIE S +SI+IF+  +AS  WC  ELVKI+   N+     V PV Y V  S
Sbjct: 926 IRSRLFEAIEESGLSIIIFASDWASLPWCFGELVKIVGFMNEMRLDTVFPVSYDVKQS 983


>gi|227438293|gb|ACP30636.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1770

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 217/691 (31%), Positives = 343/691 (49%), Gaps = 92/691 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F+SHL        I  F D  + R + I+P+L+ AI  S+ISIV
Sbjct: 13  RYRVFTSFHGPDVRKTFLSHLRKQFGCNGISMFNDQAIERSHTIAPALTQAIRESRISIV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GYC--- 119
           + ++ YASS WCL+EL++IL+ K + GQIV+ +FY VDPSD               C   
Sbjct: 73  VLTKNYASSSWCLDELLEILKCKEEIGQIVMTIFYGVDPSDVRKQTGDFGKVFKKTCRGK 132

Query: 120 ---PSLGW-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+             ES +IE    D+S KL+     D +D +VG+E
Sbjct: 133 TEEEKQRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATVSRDFED-MVGIE 191

Query: 166 SIIKEIESQLLSGSTEFNT--VGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           + + +++S LL    E     VGI G  GIGKTTIA A++S +SS F+ + FM+N+R   
Sbjct: 192 AHLDKMQS-LLHSDEEGGAMIVGICGPSGIGKTTIARALHSRLSSGFQLTCFMENLRGSC 250

Query: 224 EKVG----------------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
              G                      G+   HL     RL   KVLI+  D+ DL+Q++ 
Sbjct: 251 NSGGLDEYGLKLRLQELLLSKIFNQNGMRIYHLGAIPERLCDQKVLIILDDVDDLQQLEA 310

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L    + F  GSR+I+TT D +LL+ H  + + HV    E    ++  +F R AF Q+ P
Sbjct: 311 LADETNWFGDGSRIIVTTEDQELLELHGITNIYHVDLPTE---KEARKIFCRYAFRQSLP 367

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             G+  L+    +    +P  L+V+GS L+G  E++WES + +L+      I+ VL+V Y
Sbjct: 368 PYGYENLAERATELCGNLPFGLRVMGSMLRGKKEDDWESILCRLENSNIPKIEAVLRVGY 427

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITM 440
           D L +++Q +F   A FF   +   V   L       ++G+  L  KSL+ IS+  ++ M
Sbjct: 428 DSLHEKDQILFHLIAVFFNYENDGHVKTMLADSGLDVRLGLKTLAYKSLIKISSEGEVVM 487

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD--------- 489
           H LLQ++G + ++++   +P KR  L   +DI  VL  ++   +  GI+ D         
Sbjct: 488 HKLLQQVGRQAIQRQ---EPWKRQILIDTDDIRDVLENDSGSRSLMGISFDMSTIKDDMD 544

Query: 490 -------SLKELYLGGCSNLKRFPEISCNI-EDLD----LKETAIEELPSSIGNLS---- 533
                  S++ L      N +    +  ++ ED++    LK    E  P      +    
Sbjct: 545 ISARVFKSMRTLRFLRVYNTRCDTNVRVHLPEDMEFPPRLKLLHWEVYPRKCLPRTFCPE 604

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
            LV+L LT+ + L+ +      L SL+++ L  CL L++LP ++ N  +LE L++   + 
Sbjct: 605 HLVELHLTD-TQLEQLWEGTQPLTSLKKMVLVSCLCLKELP-DLANATNLEILDVCGCQS 662

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             +I SS+  L +L  L +  CK+LQ +P L
Sbjct: 663 LVEIHSSVGNLHRLQSLDMIFCKKLQVVPTL 693



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 165/567 (29%), Positives = 252/567 (44%), Gaps = 113/567 (19%)

Query: 134  ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLL---SGSTEFNTVGIWGI 190
            ES +IE    D+S KL+    +D +D +VG+E+ +++++S L     G   F  VGI G 
Sbjct: 1081 ESEMIEKIARDVSNKLNSTVSTDFED-MVGIEAHLEKMQSLLHLDDEGGAMF--VGICGP 1137

Query: 191  GGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG----------------------G 228
             GIGKTTIA A++S +SS F+ S FM+N+R      G                      G
Sbjct: 1138 AGIGKTTIARALHSRLSSGFQHSCFMENLRGSCCNSGLDEYGLKLRLQELLLSKIFNQNG 1197

Query: 229  LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
            +   HL     RL   KVLI+  D+ DLKQ++ L      F  GSRVI+           
Sbjct: 1198 MRIYHLGAIPERLCDQKVLIILDDVDDLKQLEALADETKWFGDGSRVIL----------- 1246

Query: 289  RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
                   + E+      D+  +F R AF Q     GF +L   V+   + +PL L+V+GS
Sbjct: 1247 -------MLEL------DARQIFCRIAFRQLSAPHGFEKLVERVVNLCSNLPLGLRVMGS 1293

Query: 349  YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVM 408
             L+    ++WE+ + +L+   + DI+ VL+V YD L  ++Q +F   ACFF   D   V 
Sbjct: 1294 SLRRKKVDDWEAILQRLENSLNRDIEGVLRVGYDNLHKDDQFLFQLIACFFNYQDDDRVK 1353

Query: 409  NFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLW 467
              L       ++G+  L  KSL+ IS    I MH LLQ++G E V    +++P KR  L 
Sbjct: 1354 AMLVDSNLDVRLGLKTLSYKSLIQISAEGTIVMHKLLQQVGREAVH---LQEPRKRQILI 1410

Query: 468  HPEDIYQVLN-------------ENTSLPTGINLDSLK---------------------- 492
                I  VL              + +++P G+ + +                        
Sbjct: 1411 DAHQICDVLENDYDSASVMGISFDTSTIPNGVCISAQAFRTMRDLRFLSIYETRRDPNVR 1470

Query: 493  ------------------ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSR 534
                              E+Y G C      PE   ++ +L    + +E+L   I  L+ 
Sbjct: 1471 MHLPEDMSFPPLLRLLHWEVYPGKCLPHTLRPE---HLVELCFVNSKLEQLWQGIQPLTN 1527

Query: 535  LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
            L  +DL+    LK V   L N   L+RLNL+GC  L ++P  IG+L  LE L +      
Sbjct: 1528 LKKMDLSGSLSLKEVPD-LSNATHLKRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISL 1586

Query: 595  KIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            ++  S   L+ L  L +  C +L+ +P
Sbjct: 1587 QVFPSHLNLASLETLEMVGCWQLRKIP 1613



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 47/199 (23%)

Query: 488 LDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK++ L  C  LK  P++  + N+E LD+    ++ E+ SS+GNL RL  LD+  C 
Sbjct: 626 LTSLKKMVLVSCLCLKELPDLANATNLEILDVCGCQSLVEIHSSVGNLHRLQSLDMIFCK 685

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----------------EEI-------GNLE 581
            L+ V + L NL SL  L + G  ++ +LP                EE         +L+
Sbjct: 686 KLQVVPT-LFNLTSLESLVIMGSYQMRELPDISTTIRELSIPETMLEEFLESTRLWSHLQ 744

Query: 582 SLEYLNLA-------------------EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            LE    A                       E+IP  +K L  L +L +  C +L SLPE
Sbjct: 745 CLEIFGCAITHQFMAHPSQRNLMVMRSVTGIERIPDCIKCLHGLKELSIYGCPKLASLPE 804

Query: 623 LPCG-SSIHARHCTSLKTL 640
           LP   +++    C SL+TL
Sbjct: 805 LPRSLTTLTVYKCPSLETL 823



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 14/149 (9%)

Query: 460  PGK-RSRLWHPEDIYQVLNENTSLPT---GIN-LDSLKELYLGGCSNLKRFPEIS--CNI 512
            PGK       PE + ++   N+ L     GI  L +LK++ L G  +LK  P++S   ++
Sbjct: 1492 PGKCLPHTLRPEHLVELCFVNSKLEQLWQGIQPLTNLKKMDLSGSLSLKEVPDLSNATHL 1551

Query: 513  EDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
            + L+L    ++ E+PSSIG+L +L +L++  C  L+   S L NL SL  L + GC +L 
Sbjct: 1552 KRLNLTGCWSLVEIPSSIGDLHKLEELEINLCISLQVFPSHL-NLASLETLEMVGCWQLR 1610

Query: 572  KLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            K+P       S + L + +   E+ P S+
Sbjct: 1611 KIP-----YVSTKSLVIGDTMLEEFPESL 1634


>gi|356506581|ref|XP_003522058.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1166

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 200/586 (34%), Positives = 305/586 (52%), Gaps = 83/586 (14%)

Query: 133 SESVLIEGNVNDISKKL--SDLFPSDNKDQLVGVESIIKE-IESQLLSGSTEFNTVGIWG 189
           +ES  I+  V +I++ L  ++LF +DN    VG+E  ++E IE      S +   +G+WG
Sbjct: 205 NESEAIKTIVENITRLLNKTELFVADNP---VGIEPRVQEMIELLDQKQSNDVLILGMWG 261

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH--LNFE---------- 237
           +GGIGKTTIA AIY+ I  +FEG  F+ +IR+  E+  G   +   L F+          
Sbjct: 262 MGGIGKTTIAKAIYNKIGRNFEGKSFLAHIREVWEQDAGQVYLQEQLLFDIKKETNTKIR 321

Query: 238 ---------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
                    + RL   +VL++  D+  L Q+++L G  + F  GSR+IITTRD+ +L   
Sbjct: 322 NVESGKVMLKERLRHKRVLLILDDVNKLHQLNVLCGSREWFGSGSRIIITTRDMHIL--- 378

Query: 289 RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
           RG RV  VF +K +  ++S+ LFS +AF Q  P   F+ELS  ++ Y+ G+PLAL+VLGS
Sbjct: 379 RGRRVDKVFRMKGMDEDESIELFSWHAFKQASPREDFIELSRNLVAYSAGLPLALEVLGS 438

Query: 349 YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLV 407
           YL  M   EW++ + KLK++P+ ++Q+ LK+SYDGL DD E+ IFLD ACFF G D+  V
Sbjct: 439 YLFDMEVIEWKNVLEKLKKIPNDEVQEKLKISYDGLTDDTEKGIFLDIACFFIGMDRNDV 498

Query: 408 MNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRL 466
           ++ L+ C   A+ GI  LV +SLVT+   NK+ MHDLL++MG EI+R ++  +  +RSRL
Sbjct: 499 IHILNGCGLCAENGIRVLVERSLVTVDYKNKLGMHDLLRDMGREIIRSKTPMELEERSRL 558

Query: 467 WHPEDIYQVLNENT----------SLPTG----------INLDSLKELYLGGCSNLKRFP 506
           W  ED   VL++ T           LP              +  L+ L L G   +  F 
Sbjct: 559 WFHEDALDVLSKETGTKAIEGLALKLPRNNTKCLSTKAFKEMKKLRLLQLAGVQLVGDFK 618

Query: 507 EISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC----------------------S 544
            +S ++  L      +  +P+++   S LV ++L N                       S
Sbjct: 619 YLSKDLRWLCWHGFPLACIPTNLYQGS-LVSIELENSNVNLLWKEAQVMEKLKILNLSHS 677

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQL 603
              + +    NL +L +L L  C +L ++   IG+L  +  +N  +     K+P S+ +L
Sbjct: 678 HYLTQTPDFSNLPNLEKLLLIDCPRLSEISYTIGHLNKVLLINFQDCISLRKLPRSIYKL 737

Query: 604 SKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTR 649
             L  L L  C ++  L E             SL TL    T +TR
Sbjct: 738 KSLKALILSGCLKIDKLEE-------DLEQMESLTTLIADKTAITR 776



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 75/104 (72%), Gaps = 1/104 (0%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R +F SHL  AL    +  F DD+ L+RGN+ISPSL  AIE S++S+V
Sbjct: 34  YDVFLSFRGEDTRASFTSHLYTALHNAGVFVFKDDETLSRGNKISPSLQLAIEESRVSVV 93

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
           +FS  YA SRWCL EL KI+E     GQ+VVPVFY VDPS+  +
Sbjct: 94  VFSRNYAESRWCLKELEKIMECHRTTGQVVVPVFYDVDPSEVRH 137



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 19/192 (9%)

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH-------PEDIYQ------ 474
           K L T +  ++    LLQ  G ++V          R   WH       P ++YQ      
Sbjct: 590 KCLSTKAFKEMKKLRLLQLAGVQLVGDFKYLSKDLRWLCWHGFPLACIPTNLYQGSLVSI 649

Query: 475 -VLNENTSL--PTGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSS 528
            + N N +L       ++ LK L L     L + P+ S   N+E L L +   + E+  +
Sbjct: 650 ELENSNVNLLWKEAQVMEKLKILNLSHSHYLTQTPDFSNLPNLEKLLLIDCPRLSEISYT 709

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
           IG+L++++ ++  +C  L+ +   +  LKSL+ L LSGCLK++KL E++  +ESL  L  
Sbjct: 710 IGHLNKVLLINFQDCISLRKLPRSIYKLKSLKALILSGCLKIDKLEEDLEQMESLTTLIA 769

Query: 589 AEKDFEKIPSSM 600
            +    ++P S+
Sbjct: 770 DKTAITRVPFSI 781


>gi|297850938|ref|XP_002893350.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339192|gb|EFH69609.1| hypothetical protein ARALYDRAFT_313276 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1541

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 223/739 (30%), Positives = 353/739 (47%), Gaps = 152/739 (20%)

Query: 12  PHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEISPSLSSAIEGS 69
           PH  K+DVFLSFRG+D R  F   L  AL +EK+  F+D D + RG+EI  SL + +E S
Sbjct: 171 PHRLKYDVFLSFRGEDTREIFAGPLYKAL-KEKVRVFLDNDGMERGDEIGSSLQAGMEDS 229

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------- 115
             S+++ S  YA+SRWCLNEL  + + K+   + ++P+FY VDPS               
Sbjct: 230 AASVIVLSRNYANSRWCLNELAMLCKLKSSLDRRMLPIFYKVDPSHVRKQSDHIEADFKR 289

Query: 116 -----------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDL 152
                                  AGY    G        ++E  +IE  V  +  +LS+ 
Sbjct: 290 HEERFDKEKVQEWRDAMKLVGNLAGYVCVEG--------SNEDEMIELVVKRVLDELSNT 341

Query: 153 FPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            P    + +VG+ES +K++     +  S+    +G++G+GGIGKTT++ A Y+ +  +F+
Sbjct: 342 -PEKVGEYIVGLESPMKDLMKLFDIESSSGVKVLGLYGMGGIGKTTLSKAFYNKVVGNFK 400

Query: 212 GSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVLIVFY 251
              F+ +IR+ S    GL  +                     L   +  +   K+++V  
Sbjct: 401 QRAFISDIRERSSAENGLVTLQKTLIKELFRLVPEIEDVSRGLEKIKENVHEKKIIVVLD 460

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+  + Q++ L+G    +  G+ ++ITTRD ++L       V   +EVK L+   SL LF
Sbjct: 461 DVDHIDQVNALVGETRWYGQGTLIVITTRDSEILSKLS---VNQQYEVKCLTEPQSLKLF 517

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMPH 370
           S ++  +  P    L+LS  +++ +  +PLA++V GS L    EE +W++ + KLK+   
Sbjct: 518 SYHSLRKEKPPKNLLKLSTEIVRISGLLPLAVEVFGSLLYDKKEEKDWQTQLGKLKKTQP 577

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND--QYLVMNFLDACRFSAKIGISRLVGK 428
            ++Q VL +S++ LDDEE+ +FLD AC F   +  +  V+  L  C  +A+  +S L  K
Sbjct: 578 HNLQDVLALSFESLDDEEKKVFLDIACLFLKMEIKKVEVVIILKGCGLNAEAALSVLRQK 637

Query: 429 SLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTG 485
           SLV I +++ + MHD +++MG ++V +ES ++PG RSRLW   +I  VLN  + TS   G
Sbjct: 638 SLVKILADDTLWMHDQIRDMGRQMVLKESGENPGMRSRLWDRGEIMTVLNNVKGTSSIRG 697

Query: 486 INLDSLKEL-------------------------YLGGCSNLKRFP--------EISCNI 512
           I LD  K+                          YL   S   RFP        EI+  +
Sbjct: 698 IVLDFKKKFVRDPTADEIASMNLTNNLGINSVFSYLK--SKFVRFPAEEKTKSSEITIPV 755

Query: 513 ED------------------------------LDLKETAIEELPSSIGNLSR-LVDLDLT 541
           E                               +  K   +E LP     L+R L  LDL+
Sbjct: 756 ESFVPMTELRLLQINNVELEGNLKLLPSELKWIQWKGCPLENLPPDF--LARQLSVLDLS 813

Query: 542 NCSGLKSVSSRLCNL--KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPS 598
             SG++ V +   N   ++L+ L L GC  LE +P ++ N E+LE L   +     K+P 
Sbjct: 814 E-SGIRRVQTLRSNRVDENLKVLILRGCHSLEAIP-DLSNHEALEMLVFEQCTLLVKVPK 871

Query: 599 SMKQLSKLSDLRLQNCKRL 617
           S+  L KL  L    C +L
Sbjct: 872 SVGNLRKLLHLDFSRCSKL 890



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 25/195 (12%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDL---- 540
            L++L EL +  C+ LKR PE   +++ L    +KET + ELP S GNLS+L+ L++    
Sbjct: 1135 LENLVELRMSNCTMLKRLPESFGDLKSLHHLYMKETLVSELPESFGNLSKLMVLEMLKNP 1194

Query: 541  ------TNCSG------LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
                  +N  G         V +   NL SL  L+        K+P+++  L SL  LNL
Sbjct: 1195 LFRISESNAPGTSEEPRFVEVPNSFSNLTSLEELDARSWRISGKIPDDLEKLSSLMKLNL 1254

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
                F  +PSS+  LS L +L L++C+ L+ LP LPC    ++  +C SL+++S+ S L 
Sbjct: 1255 GNNYFHSLPSSLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELT 1314

Query: 648  TRSSKHWDIFNFSNC 662
                   +  N +NC
Sbjct: 1315 I-----LEDLNLTNC 1324



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 3/100 (3%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGN-EISPSLSSAIEGSKISI 73
           K D FLSF+ ++ RH F   L   L +E++  + DD + RGN E+  SL  A+E S   +
Sbjct: 15  KWDAFLSFQ-RETRHKFTERLYEVLVKEQVRVWNDD-VERGNDELGASLLEAMEDSAALV 72

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP 113
           V+ S  YA S WCL EL  + + K+  G++V+P+FY V+P
Sbjct: 73  VVLSPNYAKSHWCLEELAMLCDLKSSLGRLVLPIFYEVEP 112



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 8/140 (5%)

Query: 489 DSLKELYLGGCSNLKRFPEISCNIEDLDL----KETAIEELPSSIGNLSRLVDLDLTNCS 544
           ++LK L L GC +L+  P++S N E L++    + T + ++P S+GNL +L+ LD + CS
Sbjct: 830 ENLKVLILRGCHSLEAIPDLS-NHEALEMLVFEQCTLLVKVPKSVGNLRKLLHLDFSRCS 888

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L    + +  LK L +L LSGC  L  LPE IG + SL+ L L     + +P S+ +L 
Sbjct: 889 KLSEFLADVSGLKRLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKYLPESINRLQ 948

Query: 605 KLSDLRLQNCKRLQSLPELP 624
            L  L L  C+    +PELP
Sbjct: 949 NLEILSLSGCR---YIPELP 965



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 29/170 (17%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETAIEELPSSIGNLSRL 535
            +LP+ I +L  L++L+L  C++L + P+ S N    ++ L +  +A+EELP    +L  L
Sbjct: 986  NLPSSIGDLKKLQDLHLVRCTSLSKIPD-SINELISLKKLFITGSAVEELPLKPSSLPSL 1044

Query: 536  VDLDLTNCSGLKSVSS-----------------------RLCNLKSLRRLNLSGCLKLEK 572
             D     C  LK V S                        +  L  +R+L L  C  L+ 
Sbjct: 1045 TDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHFIRKLELMNCEFLKF 1104

Query: 573  LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            LP+ IG++++L  LNL   + E++P    +L  L +LR+ NC  L+ LPE
Sbjct: 1105 LPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLKRLPE 1154



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 26/160 (16%)

Query: 488  LDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC- 543
            L  L++L+L GCS+L   PE      ++++L L  TAI+ LP SI  L  L  L L+ C 
Sbjct: 900  LKRLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKYLPESINRLQNLEILSLSGCR 959

Query: 544  ----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
                                  + LK++ S + +LK L+ L+L  C  L K+P+ I  L 
Sbjct: 960  YIPELPLCIGTLKSLEKLYLNDTALKNLPSSIGDLKKLQDLHLVRCTSLSKIPDSINELI 1019

Query: 582  SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            SL+ L +     E++P     L  L+D     CK L+ +P
Sbjct: 1020 SLKKLFITGSAVEELPLKPSSLPSLTDFSAGGCKFLKQVP 1059



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 26/196 (13%)

Query: 487  NLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
            +L SL +   GGC  LK+ P       ++  L L  T IE LP  IG L  +  L+L NC
Sbjct: 1040 SLPSLTDFSAGGCKFLKQVPSSIGGLNSLLQLQLNTTLIEALPKEIGALHFIRKLELMNC 1099

Query: 544  SGLKSVSSRLCNLKSLRRLNLSG-----------------------CLKLEKLPEEIGNL 580
              LK +   + ++ +L  LNL G                       C  L++LPE  G+L
Sbjct: 1100 EFLKFLPKSIGDMDTLCSLNLEGSNIEELPEEFGKLENLVELRMSNCTMLKRLPESFGDL 1159

Query: 581  ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            +SL +L + E    ++P S   LSKL  L +      +       G+S   R      + 
Sbjct: 1160 KSLHHLYMKETLVSELPESFGNLSKLMVLEMLKNPLFRISESNAPGTSEEPRFVEVPNSF 1219

Query: 641  SNSSTLLTRSSKHWDI 656
            SN ++L    ++ W I
Sbjct: 1220 SNLTSLEELDARSWRI 1235



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 2/88 (2%)

Query: 481  SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            SLP+  + L +L+EL L  C  LKR P + C +E L++      E  S +  L+ L DL+
Sbjct: 1261 SLPSSLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELTILEDLN 1320

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            LTNC  +  +   L +L +L+RL ++GC
Sbjct: 1321 LTNCGKVVDIPG-LEHLMALKRLYMTGC 1347


>gi|224113721|ref|XP_002316552.1| tir-nbs resistance protein [Populus trichocarpa]
 gi|222859617|gb|EEE97164.1| tir-nbs resistance protein [Populus trichocarpa]
          Length = 500

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 176/509 (34%), Positives = 266/509 (52%), Gaps = 67/509 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VFLSFRG+D R NF  HL  AL +  I TF DD++ RG  I   L  A++ SKI+I++
Sbjct: 1   YQVFLSFRGEDTRKNFTDHLYTALLQAGIHTFRDDEIGRGENIESELQKALQQSKIAIIV 60

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL-------- 122
           FS+ YASSRWCL+ELV I+E +      V+PVFY VDPS        +  +         
Sbjct: 61  FSKDYASSRWCLDELVMIMERRRTADCRVLPVFYDVDPSQVRKQTGSFATAFVEHEKHFK 120

Query: 123 -------GW----------MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  GW           G+      E++L++  V  +SK L D          +G +
Sbjct: 121 EEMERVNGWRIALKEVADLAGMVLGDGYEALLVQCIVGKVSKNL-DRKIFHVPLHFIGRD 179

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
            ++  I S L   S +     ++GIGG+GKT IA ++++     FE   ++ N+R+ S++
Sbjct: 180 PLVNYINSWLQDESHDAAIAMLYGIGGVGKTAIAKSVFNQNFRKFESRSYLSNVREISKE 239

Query: 226 VGGLANIHLNFERRRLSRM-------------------------KVLIVFYDLTDLKQID 260
             G+  +    +R+ LS +                         + LIV  D+ +  Q +
Sbjct: 240 SKGVVCL----QRQLLSDILNQTVDEIHDVDEGIIKIKDALCCRRTLIVLDDVDNRDQFN 295

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLK-NHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
            +IG  +    G ++I+TTR+  L+  N    +     +V+ L    SL LFS +AFGQ 
Sbjct: 296 AIIGMQEWLCQGCKIIVTTRNKGLIAANDEFVKC----KVEPLDNKKSLELFSWHAFGQA 351

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           +P  GF+E S  ++ + NG+PLAL+V+GS L G   + W SA+ +L  +P+ ++Q VL +
Sbjct: 352 YPVEGFVEDSWRIVHHCNGLPLALRVIGSSLSGKGRKLWGSALQELAMIPNCEVQNVLGI 411

Query: 380 SYDGLDDEEQ-NIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK- 437
           SY  LDD+ Q NIFLD ACFF G D    +  LD     A+  I +L+ + LV I+N+K 
Sbjct: 412 SYHSLDDDYQKNIFLDIACFFNGMDVDYAVTILDGLGIGARFRIDKLIDRCLVEINNDKR 471

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRL 466
           + MH L+++MG EI RQES K     SR+
Sbjct: 472 LWMHQLVRDMGREIARQESPKLSRPESRI 500


>gi|862905|gb|AAA91022.1| L6 [Linum usitatissimum]
          Length = 1294

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 184/559 (32%), Positives = 295/559 (52%), Gaps = 65/559 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           ++ S++     P  +++VFLSFRG D R  F   L  +L R KI TF DD +L +G EI 
Sbjct: 46  ISDSTNPSGSFPSVEYEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGW---MGIFDIPT----SESVLIEGNV-------NDISKKLSDLFPSD----- 156
              C    +      FD  T     +++   G++       ND    ++D   +D     
Sbjct: 166 QTGCYKKAFRKHANKFDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADKVSADIWSHI 225

Query: 157 -------NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                    D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ ISS 
Sbjct: 226 SKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSC 285

Query: 210 FEGSYFMQNIRDESEKVGGL---------------ANIHLNFE-------RRRLSRMKVL 247
           F+   F+ NIR+  EK G +                ++  N +       + R+SR K+L
Sbjct: 286 FDCCCFIDNIRETQEKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIKERVSRFKIL 345

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV  +S   S
Sbjct: 346 VVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGSMSKPRS 404

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       WE  + +L+R
Sbjct: 405 LELFSKHAFKKNTPPSYYETLANDVVDTTAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRR 464

Query: 368 MPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
             ++D +   LK+SYD L+ E + IFLD ACFF G ++         C F     I  L+
Sbjct: 465 TLNLDEVYDRLKISYDALNPEAKEIFLDIACFFIGQNKEEPYYMWTDCNFYPASNIIFLI 524

Query: 427 GKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED-IYQVLNEN----- 479
            + ++ +  +++  MHD L++MG EIVR+E +  P KRSR+W  E+ I  +LN+      
Sbjct: 525 QRCMIQVGDDDEFKMHDQLRDMGREIVRREDVL-PWKRSRIWSAEEGIDLLLNKKGSSKV 583

Query: 480 --TSLPTGINLDSLKELYL 496
              S+P G+  +   E +L
Sbjct: 584 KAISIPWGVKYEFKSECFL 602



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 60/210 (28%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
            L SL++LYL GC++L R P                         L +L +LD+  C  L 
Sbjct: 1085 LKSLQDLYLEGCTSLGRLP-------------------------LEKLKELDIGGCPDLT 1119

Query: 548  SVSSRLCNLKSLRRLNLSGCLKLE---------KLP------------------EEIGNL 580
             +   +  + SLR L +  C +LE         K P                  E +G+L
Sbjct: 1120 ELVQTVVAVPSLRGLTIRDCPRLEVGPMIQSLPKFPMLNELTLSMVNITKEDELEVLGSL 1179

Query: 581  ESLEYLNLAEKD----FEKIPSSMKQLSKLSDL--RLQNCKRLQSLPELPCGSSIHARHC 634
            E L+ L L   D     E+I S + +L KL+ L   + + + ++ L EL     ++   C
Sbjct: 1180 EELDSLELTLDDTCSSIERI-SFLSKLQKLTTLIVEVPSLREIEGLAELKSLRILYLEGC 1238

Query: 635  TSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
            TSL+ L      L  S K+ ++ +   C +
Sbjct: 1239 TSLERLWPDQQQLG-SLKNLNVLDIQGCKS 1267


>gi|399920230|gb|AFP55577.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1035

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 233/686 (33%), Positives = 344/686 (50%), Gaps = 110/686 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F  HL   L    I+TF DD +L RG  ISP L +AIE S+ +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTDHLYDKLQWRGIKTFRDDPQLERGTAISPELLTAIEQSRFAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YASS WCL EL KILE   + G I+ P+FY VDPS                   
Sbjct: 78  VVLSPNYASSTWCLLELSKILECMEERGTIL-PIFYEVDPSHVRHQRGSFAEAFQEHEEK 136

Query: 117 ---------GYCPSLGWMGIFDIPTSESVLIEGN-VNDISKKL-----SDLFPSDNKDQL 161
                    G+  +L  +      TSES   E   + +I ++L     + L    + D+L
Sbjct: 137 FGEDNKEVEGWRDALTKVASLAGWTSESYRYETQLIREIVQELWSKVHTSLTVFGSSDKL 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+++ ++EI+  L   + +   +GIWG+GGIGKT +A  +Y  IS  F+   F+ ++R 
Sbjct: 197 VGMDTKLEEIDVLLDKEANDVRFIGIWGMGGIGKTILARLVYEKISHQFDVCIFLDDVRK 256

Query: 222 ESEKVGGL--------------------ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
            S   G +                     N  +   +R      VL+V  ++   +Q++ 
Sbjct: 257 ASTDHGLVYLQKQILSQLLKEENVPVWNVNGGITMIKRCACNKAVLLVLDNVDQSEQLEN 316

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G  D F   SR+IITTR+  +L  H    V   +E+K L+ +++L LFS  AF +  P
Sbjct: 317 LVGEKDWFGLRSRIIITTRNQSVLVTHG---VEKPYELKGLNKDEALRLFSWEAFKKYEP 373

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              +   +   + YA G+PLAL+ LGS+L   S   W SA+ KL+  P   +  +L+VSY
Sbjct: 374 EEDYAGHTMTFVLYAGGLPLALKTLGSFLYKRSLHSWSSALAKLQNTPDKTVFDLLRVSY 433

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKIT 439
           DGLD+ E+ IFLD ACF   + QY+                  LV KSL+TIS  +N+I 
Sbjct: 434 DGLDEMEKKIFLDIACF---SSQYV------------------LVEKSLLTISSFDNQII 472

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGI--NLDSLKELY 495
           +HDL++EMG EIVRQES ++PG RS LW   DI+ V  +N  T +  GI  +L  L+E  
Sbjct: 473 IHDLIREMGCEIVRQESYEEPGGRSLLWLRNDIFHVFAKNTGTEVTEGIFLHLHKLEE-- 530

Query: 496 LGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL---------------DL 540
                NL+ F ++ C ++ L +    +   P  + +  R++                 DL
Sbjct: 531 --ADWNLQAFSKM-CKLKLLYIHNLRLSLGPKFLPDALRILKWSWYPSKSLPPGFQPDDL 587

Query: 541 TNCSGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEK 595
           T  S + S  + L N    L  L+ ++LS  + L + P+  G + +LE L L       K
Sbjct: 588 TILSLVHSNITHLWNGIKYLGKLKSIDLSYSINLTRTPDFTG-IPNLEKLVLEGCTSLVK 646

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLP 621
           I  S+  L +L     +NCK ++SLP
Sbjct: 647 IHPSIALLKRLKIWNFRNCKSIKSLP 672


>gi|4588054|gb|AAD25968.1|AF093641_2 flax rust resistance protein [Linum usitatissimum]
          Length = 1294

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 184/559 (32%), Positives = 295/559 (52%), Gaps = 65/559 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           ++ S++     P  +++VFLSFRG D R  F   L  +L R KI TF DD +L +G EI 
Sbjct: 46  ISDSTNPSGSFPSVEYEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGW---MGIFDIPT----SESVLIEGNV-------NDISKKLSDLFPSD----- 156
              C    +      FD  T     +++   G++       ND    ++D   +D     
Sbjct: 166 QTGCYKKAFRKHANKFDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADKVSADIWSHI 225

Query: 157 -------NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                    D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ ISS 
Sbjct: 226 SKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSC 285

Query: 210 FEGSYFMQNIRDESEKVGGL---------------ANIHLNFE-------RRRLSRMKVL 247
           F+   F+ NIR+  EK G +                ++  N +       + R+SR K+L
Sbjct: 286 FDCCCFIDNIRETQEKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIKERVSRFKIL 345

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV  +S   S
Sbjct: 346 VVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGSMSKPRS 404

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       WE  + +L+R
Sbjct: 405 LELFSKHAFKKNTPPSYYETLANDVVDTTAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRR 464

Query: 368 MPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
             ++D +   LK+SYD L+ E + IFLD ACFF G ++         C F     I  L+
Sbjct: 465 TLNLDEVYDRLKISYDALNPEAKEIFLDIACFFIGQNKEEPYYMWTDCNFYPASNIIFLI 524

Query: 427 GKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED-IYQVLNEN----- 479
            + ++ +  +++  MHD L++MG EIVR+E +  P KRSR+W  E+ I  +LN+      
Sbjct: 525 QRCMIQVGDDDEFKMHDQLRDMGREIVRREDVL-PWKRSRIWSAEEGIDLLLNKKGSSKV 583

Query: 480 --TSLPTGINLDSLKELYL 496
              S+P G+  +   E +L
Sbjct: 584 KAISIPWGVKYEFKSECFL 602



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 13/163 (7%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
            L SL+ L+L GC++L R P     +++LD+     + EL  ++  +  LV+L + +C  L
Sbjct: 1085 LKSLQRLFLVGCTSLGRLP--LEKLKELDIGGCPDLTELVQTVVAVPSLVELTIWDCPRL 1142

Query: 547  K--SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD----FEKIPSS 599
            +   +   L N   L  L LS   +  E     +G+LE L+ L L   D     E+I SS
Sbjct: 1143 EVGPMIQSLPNFPMLNELTLSMVNITKEDELAVLGSLEELDSLVLKLDDTCSSIERI-SS 1201

Query: 600  MKQLSKLSDLRLQ--NCKRLQSLPELPCGSSIHARHCTSLKTL 640
            + +L KL+ L+++  + + ++ L EL     ++ + CTSL+ L
Sbjct: 1202 LSKLQKLTRLKVEVPSLREIEGLAELKSLYELYLQGCTSLERL 1244


>gi|145358924|ref|NP_199464.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008011|gb|AED95394.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1168

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 232/734 (31%), Positives = 341/734 (46%), Gaps = 126/734 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSF GKDVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSRNWV----YDVFLSFSGKDVRVTFRSHFLKELDRKLISAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   I++PVFY VDPS   Y  
Sbjct: 57  DLEQAIKDSRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IIIPVFYGVDPSQVRY-- 111

Query: 121 SLGWMG-IFDIPTS------------------------------ESVLIEGNVNDISKKL 149
            +G  G IF+                                  E+ +IE   ND+  KL
Sbjct: 112 QIGEFGSIFEKTCKRQTEEVKNQWKKALTDVANMLGFDSAKWDDEAKMIEEIANDVLAKL 171

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                +D+ +  +G+E  I  +   L   + E   VGIWG  GIGKTTIA A+++ +S H
Sbjct: 172 LLTSSTDSAENSIGIEDHIANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRH 231

Query: 210 FEGSYFMQ--------------NIRDESEK----------VGGLANI---HLNFERRRLS 242
           F  S F+               N  D + K          + G  +I   HL     RL 
Sbjct: 232 FPVSKFIDRAFVYKSRETYKGANPDDPNMKLHLQGCFLSEILGKKDIKIDHLGALGERLK 291

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             K LI+  DL DL  +D L+G+ + F  GSR+I+ T + Q L+ H    + H++EV   
Sbjct: 292 HQKTLIIIDDLDDLVVLDSLVGKTNWFGCGSRIIVITNNKQFLRAHG---IDHIYEVSLP 348

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           S   +  +F ++AFG+N P  GF EL   +   A  +PL L V GS L+G  +E W   +
Sbjct: 349 SKERAQEMFCQSAFGENSPPEGFEELVVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKML 408

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
            +L+     +I++ LKVSYD + + ++Q +F   AC F       +   L        I 
Sbjct: 409 PRLQNDLDGNIEETLKVSYDAIGNVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIA 468

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--N 479
           +  LV KSL+ + N+ + MH LLQE G  IVR +S  +PG+R  L    D   VL+E   
Sbjct: 469 LENLVDKSLIHVRNDHVEMHRLLQETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIG 528

Query: 480 TSLPTGINLDSLK-------ELYLGGCSNL------------------------------ 502
           T    GI+LD+ K       E    G  NL                              
Sbjct: 529 TRKVLGISLDTSKVSEFCVHENAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQP 588

Query: 503 -----KRFPEISC-------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
                 RFP + C       N+  L++ ++ +E+L     + + L +LD+     LK + 
Sbjct: 589 KQLIWDRFP-LKCMPYTFLRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIP 647

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
             L    ++ +L+   C  L +LP  I NL  L  LN+    + E +P+    L  L  L
Sbjct: 648 D-LSKATNIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGF-NLKSLDYL 705

Query: 610 RLQNCKRLQSLPEL 623
               C +L++ PE 
Sbjct: 706 NFNECWKLRTFPEF 719



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 58/93 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLPTGINL+SL  L L GCS LKRFP+IS NI+ LDL +T IEE+P  I N   L  L +
Sbjct: 811 SLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLTKLTM 870

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             C  LK VS  +  LK L  ++ S C  L ++
Sbjct: 871 KGCRELKCVSLNIFKLKHLGEVSFSNCGALTRV 903



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 50/189 (26%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI--GNLSRL--- 535
           +LPTG NL SL  L    C  L+ FPE + NI +L L ET+IEE PS++   N+  L   
Sbjct: 692 TLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAETSIEEYPSNLYFKNVRELSMG 751

Query: 536 -VDLDLTNCSGLK----------------------SVSSRLCNLKSLRRLNLSGCLKLEK 572
             D D   C G+K                       +SS   NL +L RL++  C  LE 
Sbjct: 752 KADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLDICYCRNLES 811

Query: 573 LPEEIGNLESL---------------------EYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
           LP  I NLESL                     +YL+L +   E++P  ++    L+ L +
Sbjct: 812 LPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLTKLTM 870

Query: 612 QNCKRLQSL 620
           + C+ L+ +
Sbjct: 871 KGCRELKCV 879


>gi|315507085|gb|ADU33178.1| putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]
          Length = 965

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 221/685 (32%), Positives = 325/685 (47%), Gaps = 140/685 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R NF SHL+ AL ++ +  FI+DKL RG +IS SL  +I+ + ISIVI
Sbjct: 17  YDVFLSFRGEDTRTNFTSHLDMALRQKGVNVFINDKLERGEQISESLFKSIQEASISIVI 76

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSLG 123
           FS+ YASS WCL+ELV I+E K   GQ V PVFY VDPSD            A + P   
Sbjct: 77  FSQNYASSSWCLDELVNIIECKKSKGQNVFPVFYKVDPSDIRKQTGSFGEALAKHQPKFQ 136

Query: 124 -----WMGIFDIPTSESVLIEGN------VNDISKKLSDLF-----PSDNKDQLVGVESI 167
                W        + S    G       + D+ KK+  +      P       VG++S 
Sbjct: 137 TKTQIWREALTTAANLSGWNLGTRKEADLIGDLVKKVLSVLNRTCTPLYVAKYPVGIDSK 196

Query: 168 IKEIE---SQLLSGSTEFN--------------TVGIWGIGGIGKTTIASAIYSNISSHF 210
           ++ ++     L   S +F+               VG++GIGGIGKTT+A A+Y+ I+S F
Sbjct: 197 LEYMKLRSHSLFEKSNKFHYRKQHEYESDTGVYMVGLYGIGGIGKTTLAKALYNKIASQF 256

Query: 211 EGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKVLIVF 250
           EG  F+ N+R+ S++  GLA +                     +N  R RL   KVLIV 
Sbjct: 257 EGCCFLSNVREASKQFNGLAQLQETLLYEILTVDLKVVNLDRGINIIRNRLCLKKVLIVL 316

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+  L+Q++ L+G  D F  GSR+I+TTR+  LL +H    + ++  + E   + ++ L
Sbjct: 317 DDVDKLEQLEALVGGRDWFGQGSRIIVTTRNKHLLSSHGFDEMKNILGLDE---DKAIEL 373

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
           FS +AF +NHP++ +L+LS     Y  G PLAL VLGS+L   + ++   AV  +K    
Sbjct: 374 FSWHAFKKNHPSSNYLDLSKRATSYCKGHPLALVVLGSFL--CTRDQGTDAVKGIK---- 427

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI---------- 420
           +D     ++             +D   F K  +  L++  +   RFS KI          
Sbjct: 428 LDFPNSTRLD------------VDPQAFRKMKNLRLLI--VQNARFSTKIEYLPDSLKWI 473

Query: 421 ---GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKR----SRLWHPEDIY 473
              G  +    S  T+ N           + G  ++   IK  GKR     RL   +  Y
Sbjct: 474 KWHGFRQPTFPSFFTMKN-----------LVGLDLQHSFIKTFGKRLEDCERLKLVDLSY 522

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
               E   +P      +L+ELYL  C+NL                      +  S+ +L 
Sbjct: 523 STFLEK--IPNFSAASNLEELYLSNCTNLGM--------------------IDKSVFSLD 560

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KD 592
           +L  L+L  CS LK +      L SL++LNLS C KLEK+P ++ +  +L  L++ E  +
Sbjct: 561 KLTVLNLDGCSNLKKLPRGYFMLSSLKKLNLSYCKKLEKIP-DLSSASNLTSLHIYECTN 619

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRL 617
              I  S+  L KL  L L+ C  L
Sbjct: 620 LRVIHESVGSLDKLEGLYLKQCTNL 644



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 9/124 (7%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           T +E++P+     S L +L L+NC+ L  +   + +L  L  LNL GC  L+KLP     
Sbjct: 524 TFLEKIPN-FSAASNLEELYLSNCTNLGMIDKSVFSLDKLTVLNLDGCSNLKKLPRGYFM 582

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS-----SIHARH 633
           L SL+ LNL+  K  EKIP  +   S L+ L +  C  L+ + E   GS      ++ + 
Sbjct: 583 LSSLKKLNLSYCKKLEKIP-DLSSASNLTSLHIYECTNLRVIHE-SVGSLDKLEGLYLKQ 640

Query: 634 CTSL 637
           CT+L
Sbjct: 641 CTNL 644


>gi|4588060|gb|AAD25971.1|AF093644_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1301

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 177/533 (33%), Positives = 277/533 (51%), Gaps = 70/533 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++     P  ++DVFLSFRG D R  F   L   LC  KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGSFPSVEYDVFLSFRGPDTRKQFTDFLYHFLCYYKIHTFRDDDELRKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGW---MGIFDIPTSESVLIEGNVNDISKKLSDL----FPSDNK---------- 158
              C    +      FD  T +      N  D  KK+ DL       D++          
Sbjct: 166 QTGCYKKAFRKHANKFDGQTIQ------NWKDALKKVGDLKGWHIGKDDEQGAITDEVLA 219

Query: 159 ---------------DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIY 203
                          D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y
Sbjct: 220 DIWSHISKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVY 279

Query: 204 SNISSHFEGSYFMQNIRDESEKVGGLANIH--------------LNFE---------RRR 240
           + ISS F+   F+ NIR+  ++  G+  +               + F          + R
Sbjct: 280 NKISSCFDRCCFIDNIRETQDQKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKMIKER 339

Query: 241 LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVK 300
           +SR K+L+V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV 
Sbjct: 340 VSRFKILVVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVG 398

Query: 301 ELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWES 360
            +S   SL LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       W+ 
Sbjct: 399 SMSKPHSLELFSKHAFKKNTPPSDYETLANDVVDTTAGLPLTLKVIGSILFKQEIGVWKD 458

Query: 361 AVNKLKRMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
            + +L++  ++D +   LK+SYD L  E + IFLD ACFF G ++ +       C F   
Sbjct: 459 TLQQLRKTLNLDEVYDRLKISYDALKPEAKEIFLDIACFFIGKNKEVPYYMWTDCNFYPA 518

Query: 420 IGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
             I  L+ + ++ +  ++K  MHD L++MG EIVR+E I+ P KRSR+W  E+
Sbjct: 519 SNIIFLIQRCMIQVGDDDKFKMHDQLRDMGREIVRREDIR-PWKRSRIWSREE 570



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 37/164 (22%)

Query: 490  SLKELYLGGCSNLKRFPEISC-----NIEDLDLKETAI--EELPSSIGNLSRLVDLDLT- 541
            SL EL +  C  L+  P I        ++ LDL    I  EE   +IG+L  LV L+L  
Sbjct: 998  SLVELTIRDCPRLEVGPMIRSLPKFPMLKKLDLAVANITKEEDLDAIGSLEELVSLELKL 1057

Query: 542  --NCSGLKSVSS---------------------RLCNLKSLRRLNLSGCLKLEKLPEEIG 578
                SG++ + S                      L  LKSL+RL L GC  L +LP    
Sbjct: 1058 DDTSSGIERIVSLSKLQKLTTLKVEVPSLREIEELAELKSLQRLILEGCTSLGRLP---- 1113

Query: 579  NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             LE L+ L++    D  ++  ++  +  L +L +++C RL+  P
Sbjct: 1114 -LEKLKELDIGGCPDLAELVQTVVAVPSLVELTIRDCPRLEVGP 1156



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 14/187 (7%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
            L SL+ L L GC++L R P     +++LD+     + EL  ++  +  LV+L + +C  L
Sbjct: 1095 LKSLQRLILEGCTSLGRLP--LEKLKELDIGGCPDLAELVQTVVAVPSLVELTIRDCPRL 1152

Query: 547  K--SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD----FEKIPSS 599
            +   +   L     L +L LS   +  E   E +G+LE L  L L   D     E+I S 
Sbjct: 1153 EVGPMIQSLSKFPMLNKLTLSMVNITKEDELEVLGSLEKLVSLKLKLDDTSSGIERI-SF 1211

Query: 600  MKQLSKLSDL--RLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIF 657
            + +L KL+ L   + + + ++ L EL     ++ + CTSL+ L      L  S K+    
Sbjct: 1212 LSKLQKLTTLIVEVPSLREIEGLAELKSLYDLYLQGCTSLERLWPDQQQLG-SLKNLKAL 1270

Query: 658  NFSNCSN 664
            N   C +
Sbjct: 1271 NIRGCKS 1277


>gi|22327500|ref|NP_198989.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007335|gb|AED94718.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1046

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 215/701 (30%), Positives = 331/701 (47%), Gaps = 106/701 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +H VF  F G DVR  F+SHL++    + I TF D  + RG  I P L   I+ +++SIV
Sbjct: 15  RHHVFSRFHGPDVRKGFLSHLHSLFASKGITTFNDQNIERGQTIGPELIQGIKEARVSIV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVP--VF---------------------YLV 111
           + S+ YASS WCL+ELV+IL+ K   GQIV+   VF                      L 
Sbjct: 75  VLSKNYASSSWCLDELVEILKCKEALGQIVMTSGVFGKAFEKTCQGKNEEVKIRWRNALA 134

Query: 112 DPSDAGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI 171
             +      SL W        +E+ +I+    D+S KL +L PS + + +VG+E+ +K +
Sbjct: 135 HVATIAGEHSLNW-------DNEAKMIQKIATDVSDKL-NLTPSRDFEGMVGMEAHLKRL 186

Query: 172 ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN-ISSHFEGSYFMQNIRDESEKVGG-- 228
            S L   S E   +GIWG  GIGKTTIA A++ + +SS F+   FM N++   + V    
Sbjct: 187 NSLLCLESDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGSIKGVADHD 246

Query: 229 ---------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFV 270
                    L+ I         HL   R RL   +VLI+  D+ DLKQ+++L   +  F 
Sbjct: 247 SKLRLQKQLLSKIFKEENMKIHHLGAIRERLHDQRVLIILDDVDDLKQLEVLAKEISWFG 306

Query: 271 PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSN 330
            GSR+I TT D ++LK H    + +++ V   S  D+L +   +AF Q+    GF EL+N
Sbjct: 307 SGSRIIGTTEDKKILKAHG---IHNIYRVDFPSKKDALEILCLSAFKQSSIPDGFEELAN 363

Query: 331 IVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQN 390
            V K  + +PL L V+G+ L+G   +EWE  +++++     DI  +L++ YD L   +++
Sbjct: 364 KVAKLCSNLPLGLCVVGASLRGEGNQEWERLLSRIESSLDRDIDDILRIGYDRLLTNDKS 423

Query: 391 IFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGE 450
           +FL  ACFF       V   L         G + L  +SLV IS     +  +L +   +
Sbjct: 424 LFLHIACFFNYAKVDNVTALLADSNLDVGNGFNTLADRSLVRISTYDDGI-SVLSDSNLD 482

Query: 451 IVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD-------SLKELYLGGCSN 501
           IV ++S K+PGKR  +  PE+I  VL   T   +  GI+ D       S+ +    G  N
Sbjct: 483 IVLEQS-KEPGKREFIIEPEEIRDVLTNETGTGSVIGISFDTSNIGEVSVSKDAFEGMRN 541

Query: 502 LK--------------------------------RFPEISC-------NIEDLDLKETAI 522
           L+                                R+P  S         + +L +  + +
Sbjct: 542 LRFLRIYRLLGGEVTLQIPEDMDYIPRLRLLYWDRYPRKSLPRRFKPERLVELHMPRSNL 601

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
           E L   I  L  L  ++L     LK + + L    +L RL L  CL L +LP  I NL  
Sbjct: 602 ELLWGGIEPLPNLKIINLNRSYRLKEIPN-LSKATNLERLTLESCLSLVELPSSISNLHK 660

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           LE L++      ++  +   L+ L  L +  C RL++ P++
Sbjct: 661 LEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDI 701



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 41/185 (22%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ L + GCS L+ FP+IS NI+ L      IE++P S+G  SRL  L ++
Sbjct: 675 IPTNINLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPSVGCWSRLDQLHIS 734

Query: 542 NCSGLKSVSSRLCNLKSLRRL-NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +              +SL+RL ++  C+ L               L+L     E+I   +
Sbjct: 735 S--------------RSLKRLMHVPPCITL---------------LSLRGSGIERITDCV 765

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSSTLLTRSSKH--WDIF 657
             L++L  L + +C++L+S+  LP    +  A  C SLK +        R S H      
Sbjct: 766 IGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRV--------RFSFHNPMHTL 817

Query: 658 NFSNC 662
           +F+NC
Sbjct: 818 DFNNC 822


>gi|110741877|dbj|BAE98880.1| disease resistance like protein [Arabidopsis thaliana]
          Length = 1168

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 232/734 (31%), Positives = 341/734 (46%), Gaps = 126/734 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS N +    +DVFLSF GKDVR  F SH    L R+ I  F D+++ R + + P
Sbjct: 1   MASSSSSRNWV----YDVFLSFSGKDVRVTFRSHFLKELDRKLISAFRDNEIERSHSLWP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L  AI+ S+I++V+FS+ YASS WCLNEL++I+   +K   I++PVFY VDPS   Y  
Sbjct: 57  DLEQAIKDSRIAVVVFSKNYASSSWCLNELLEIVNCNDK---IIIPVFYGVDPSQVRY-- 111

Query: 121 SLGWMG-IFDIPTS------------------------------ESVLIEGNVNDISKKL 149
            +G  G IF+                                  E+ +IE   ND+  KL
Sbjct: 112 QIGEFGSIFEKTCKRQTEEVKNQWKKALTDVANMLGFDSAKWDDEAKMIEEIANDVLAKL 171

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                +D+ +  +G+E  I  +   L   + E   VGIWG  GIGKTTIA A+++ +S H
Sbjct: 172 LLTSSTDSAENSIGIEDHIANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRH 231

Query: 210 FEGSYFMQ--------------NIRDESEKVG----------GLANI---HLNFERRRLS 242
           F  S F+               N  D + K+           G  +I   HL     RL 
Sbjct: 232 FPVSKFIDRAFVYKSRETYKGANPDDPNMKLHLQGCFLSEILGKKDIKIDHLGALGERLK 291

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             K LI+  DL DL  +D L+G+ + F  GSR+I+ T + Q L+ H    + H++EV   
Sbjct: 292 HQKTLIIIDDLDDLVVLDSLVGKTNWFGCGSRIIVITNNKQFLRAHG---IDHIYEVSLP 348

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           S   +  +F ++AFG+N P  GF EL   +   A  +PL L V GS L+G  +E W   +
Sbjct: 349 SKERAQEMFCQSAFGENSPPEGFEELVVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKML 408

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
            +L+     +I++ LKVSYD + + ++Q +F   AC F       +   L        I 
Sbjct: 409 PRLQNDLDGNIEETLKVSYDAIGNVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIA 468

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--N 479
           +  LV KSL+ + N+ + MH LLQE G  IVR +S  +PG+R  L    D   VL+E   
Sbjct: 469 LENLVDKSLIHVRNDHVEMHRLLQETGRNIVRSQSTDNPGERVFLVDSNDSRTVLSEGIG 528

Query: 480 TSLPTGINLDSLK-------ELYLGGCSNL------------------------------ 502
           T    GI+LD+ K       E    G  NL                              
Sbjct: 529 TRKVLGISLDTSKVSEFCVHENAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQP 588

Query: 503 -----KRFPEISC-------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
                 RFP + C       N+  L++ ++ +E+L     + + L +LD+     LK + 
Sbjct: 589 KQLIWDRFP-LKCMPYTFLRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIP 647

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDL 609
             L    ++ +L+   C  L +LP  I NL  L  LN+    + E +P+    L  L  L
Sbjct: 648 D-LSKATNIEKLDFGHCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGF-NLKSLDYL 705

Query: 610 RLQNCKRLQSLPEL 623
               C +L++ PE 
Sbjct: 706 NFNECWKLRTFPEF 719



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 58/93 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLPTGINL+SL  L L GCS LKRFP+IS NI+ LDL +T IEE+P  I N   L  L +
Sbjct: 811 SLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLTKLTM 870

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             C  LK VS  +  LK L  ++ S C  L ++
Sbjct: 871 KGCRELKCVSLNIFKLKHLGEVSFSNCGALTRV 903



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 50/189 (26%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI--GNLSRL--- 535
           +LPTG NL SL  L    C  L+ FPE + NI +L L ET+IEE PS++   N+  L   
Sbjct: 692 TLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAETSIEEYPSNLYFKNVRELSMG 751

Query: 536 -VDLDLTNCSGLK----------------------SVSSRLCNLKSLRRLNLSGCLKLEK 572
             D D   C G+K                       +SS   NL +L RL++  C  LE 
Sbjct: 752 KADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLDICYCRNLES 811

Query: 573 LPEEIGNLESL---------------------EYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
           LP  I NLESL                     +YL+L +   E++P  ++    L+ L +
Sbjct: 812 LPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLTKLTM 870

Query: 612 QNCKRLQSL 620
           + C+ L+ +
Sbjct: 871 KGCRELKCV 879


>gi|238481459|ref|NP_001154757.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007336|gb|AED94719.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1114

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 215/701 (30%), Positives = 331/701 (47%), Gaps = 106/701 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +H VF  F G DVR  F+SHL++    + I TF D  + RG  I P L   I+ +++SIV
Sbjct: 15  RHHVFSRFHGPDVRKGFLSHLHSLFASKGITTFNDQNIERGQTIGPELIQGIKEARVSIV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVP--VF---------------------YLV 111
           + S+ YASS WCL+ELV+IL+ K   GQIV+   VF                      L 
Sbjct: 75  VLSKNYASSSWCLDELVEILKCKEALGQIVMTSGVFGKAFEKTCQGKNEEVKIRWRNALA 134

Query: 112 DPSDAGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI 171
             +      SL W        +E+ +I+    D+S KL +L PS + + +VG+E+ +K +
Sbjct: 135 HVATIAGEHSLNW-------DNEAKMIQKIATDVSDKL-NLTPSRDFEGMVGMEAHLKRL 186

Query: 172 ESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN-ISSHFEGSYFMQNIRDESEKVGG-- 228
            S L   S E   +GIWG  GIGKTTIA A++ + +SS F+   FM N++   + V    
Sbjct: 187 NSLLCLESDEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKCFMGNLKGSIKGVADHD 246

Query: 229 ---------LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFV 270
                    L+ I         HL   R RL   +VLI+  D+ DLKQ+++L   +  F 
Sbjct: 247 SKLRLQKQLLSKIFKEENMKIHHLGAIRERLHDQRVLIILDDVDDLKQLEVLAKEISWFG 306

Query: 271 PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSN 330
            GSR+I TT D ++LK H    + +++ V   S  D+L +   +AF Q+    GF EL+N
Sbjct: 307 SGSRIIGTTEDKKILKAHG---IHNIYRVDFPSKKDALEILCLSAFKQSSIPDGFEELAN 363

Query: 331 IVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQN 390
            V K  + +PL L V+G+ L+G   +EWE  +++++     DI  +L++ YD L   +++
Sbjct: 364 KVAKLCSNLPLGLCVVGASLRGEGNQEWERLLSRIESSLDRDIDDILRIGYDRLLTNDKS 423

Query: 391 IFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGE 450
           +FL  ACFF       V   L         G + L  +SLV IS     +  +L +   +
Sbjct: 424 LFLHIACFFNYAKVDNVTALLADSNLDVGNGFNTLADRSLVRISTYDDGI-SVLSDSNLD 482

Query: 451 IVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD-------SLKELYLGGCSN 501
           IV ++S K+PGKR  +  PE+I  VL   T   +  GI+ D       S+ +    G  N
Sbjct: 483 IVLEQS-KEPGKREFIIEPEEIRDVLTNETGTGSVIGISFDTSNIGEVSVSKDAFEGMRN 541

Query: 502 LK--------------------------------RFPEISC-------NIEDLDLKETAI 522
           L+                                R+P  S         + +L +  + +
Sbjct: 542 LRFLRIYRLLGGEVTLQIPEDMDYIPRLRLLYWDRYPRKSLPRRFKPERLVELHMPRSNL 601

Query: 523 EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
           E L   I  L  L  ++L     LK + + L    +L RL L  CL L +LP  I NL  
Sbjct: 602 ELLWGGIEPLPNLKIINLNRSYRLKEIPN-LSKATNLERLTLESCLSLVELPSSISNLHK 660

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           LE L++      ++  +   L+ L  L +  C RL++ P++
Sbjct: 661 LEILDVKFCSMLQVIPTNINLASLERLDVSGCSRLRTFPDI 701



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 41/185 (22%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ L + GCS L+ FP+IS NI+ L      IE++P S+G  SRL  L ++
Sbjct: 675 IPTNINLASLERLDVSGCSRLRTFPDISSNIKTLIFGNIKIEDVPPSVGCWSRLDQLHIS 734

Query: 542 NCSGLKSVSSRLCNLKSLRRL-NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +              +SL+RL ++  C+ L               L+L     E+I   +
Sbjct: 735 S--------------RSLKRLMHVPPCITL---------------LSLRGSGIERITDCV 765

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSSTLLTRSSKH--WDIF 657
             L++L  L + +C++L+S+  LP    +  A  C SLK +        R S H      
Sbjct: 766 IGLTRLHWLNVDSCRKLKSILGLPSSLKVLDANDCVSLKRV--------RFSFHNPMHTL 817

Query: 658 NFSNC 662
           +F+NC
Sbjct: 818 DFNNC 822


>gi|10121908|gb|AAG13418.1|AC000348_15 T7N9.23 [Arabidopsis thaliana]
          Length = 1560

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 176/536 (32%), Positives = 290/536 (54%), Gaps = 68/536 (12%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG D R NF  HL  AL ++K+  F D++ + RG+EIS SL + +E S  S+
Sbjct: 160 KYDVFLSFRGADTRDNFGDHLYKAL-KDKVRVFRDNEGMERGDEISSSLKAGMEDSAASV 218

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG---------------- 117
           ++ S  Y+ SRWCL+EL  + + K+   + ++P+FY VDPS                   
Sbjct: 219 IVISRNYSGSRWCLDELAMLCKMKSSLDRRILPIFYHVDPSHVRKQSDHIKKDFEEHQVR 278

Query: 118 ----------YCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
                     +  +L  +G     + D  + +  +IE  V  +  +LS+  P    + +V
Sbjct: 279 FSEEKEKVQEWREALTLVGNLAGYVCDKDSKDDDMIELVVKRVLAELSNT-PEKVGEFIV 337

Query: 163 GVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G+ES +K++   +    S+    +G++G+GGIGKTT+A A Y+ I  +FE   F+ +IR+
Sbjct: 338 GLESPLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRE 397

Query: 222 ESEKVGGLA------------------NIHLNFERRR--LSRMKVLIVFYDLTDLKQIDL 261
            S    GL                   ++ +  E+ +  +   K+++V  D+  + Q+  
Sbjct: 398 RSSAENGLVTLQKTLIKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHA 457

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L+G    +  G+ ++ITTRD ++L       V   +EVK L+   +L LFS ++  +  P
Sbjct: 458 LVGETRWYGQGTLIVITTRDSEILSK---LSVNQQYEVKCLTEPQALKLFSYHSLRKEEP 514

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMPHMDIQKVLKVS 380
               L LS  +++ +  +PLA++V GS L    EE +W++ ++KLK+    ++Q VL++S
Sbjct: 515 TKNLLALSKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDVLELS 574

Query: 381 YDGLDDEEQNIFLDTACFFK----GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SN 435
           +  LDDEE+ +FLD AC F       D+ +++  L  C  +A+  +S L  KSLV I +N
Sbjct: 575 FKSLDDEEKKVFLDIACLFLKMEIKKDEVVIV--LKGCGLNAEAALSVLRQKSLVKILAN 632

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLD 489
           + + MHD +++MG ++V +ES +DPG RSRLW   +I  VLN  + TS   GI LD
Sbjct: 633 DTLWMHDQIRDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLD 688



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 2/98 (2%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGN-EISPSLSSAIEGSKISIVI 75
           DVFLSF+ +D RH F   L   L +E++  + +D + RGN E+  SL  A+E S   +V+
Sbjct: 17  DVFLSFQ-RDARHKFTERLYEVLVKEQVRVWNNDDVERGNHELGASLVEAMEDSVALVVV 75

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP 113
            S  YA S WCL EL  + + K+  G++V+P+FY V+P
Sbjct: 76  LSPNYAKSHWCLEELAMLCDLKSSLGRLVLPIFYEVEP 113



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 25/196 (12%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            L+ L EL +  C  LKR PE   +++ L    +KET + ELP S GNLS L+ L++    
Sbjct: 1150 LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 1209

Query: 545  GLKSVSSRLCNLKSLRRL-----NLSGCLKLE-----------KLPEEIGNLESLEYLNL 588
              +   S +       R      + S  LKLE           K+P+++  L  L  LNL
Sbjct: 1210 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNL 1269

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
                F  +PSS+ +LS L +L L++C+ L+ LP LPC    ++  +C SL+++S+ S L 
Sbjct: 1270 GNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELT 1329

Query: 648  TRSSKHWDIFNFSNCS 663
              +       N +NC+
Sbjct: 1330 ILTD-----LNLTNCA 1340



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 4/136 (2%)

Query: 489 DSLKELYLGGCSNLKRFPEISCN--IEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           ++LK + L GC +L+  P++S +  +E L  ++ T + ++P S+GNL +L+ LD   CS 
Sbjct: 846 ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 905

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L      +  LK L +L LSGC  L  LPE IG + SL+ L L     + +P S+ +L  
Sbjct: 906 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQN 965

Query: 606 LSDLRLQNCKRLQSLP 621
           L  L L+ CK +Q LP
Sbjct: 966 LEILSLRGCK-IQELP 980



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 29/170 (17%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETAIEELPSSIGNLSRL 535
            +LP+ I +L +L++L+L  C++L + P+ S N    ++ L +  +A+EELP    +L  L
Sbjct: 1001 NLPSSIGDLKNLQDLHLVRCTSLSKIPD-SINELKSLKKLFINGSAVEELPLKPSSLPSL 1059

Query: 536  VDLDLTNCSGLKSVSS-----------------------RLCNLKSLRRLNLSGCLKLEK 572
             D    +C  LK V S                        +  L  +R L L  C  L+ 
Sbjct: 1060 YDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKF 1119

Query: 573  LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            LP+ IG++++L  LNL   + E++P    +L KL +LR+ NCK L+ LPE
Sbjct: 1120 LPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 1169



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 25/159 (15%)

Query: 488  LDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC- 543
            L  L++L+L GCS+L   PE      ++++L L  TAI+ LP SI  L  L  L L  C 
Sbjct: 916  LKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK 975

Query: 544  ---------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
                                 + LK++ S + +LK+L+ L+L  C  L K+P+ I  L+S
Sbjct: 976  IQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKS 1035

Query: 583  LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L+ L +     E++P     L  L D    +CK L+ +P
Sbjct: 1036 LKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 1074



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 481  SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            SLP+  + L +L+EL L  C  LKR P + C +E L+L      E  S +  L+ L DL+
Sbjct: 1276 SLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLN 1335

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            LTNC+ +  +   L +L +L+RL ++GC
Sbjct: 1336 LTNCAKVVDIPG-LEHLTALKRLYMTGC 1362



 Score = 45.8 bits (107), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 19/150 (12%)

Query: 498  GCSNLKRFPEIS------CNIEDLDLKETAIE-ELPSSIGNLSRLVDLDLTNCSGLKSVS 550
            G S   RF E+         +E+LD     I  ++P  +  LS L+ L+L N +   S+ 
Sbjct: 1220 GTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGN-NYFHSLP 1278

Query: 551  SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
            S L  L +L+ L+L  C +L++LP     LE L   NLA     +  S + +L+ L+DL 
Sbjct: 1279 SSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL---NLANCFSLESVSDLSELTILTDLN 1335

Query: 611  LQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            L NC ++  +P L         H T+LK L
Sbjct: 1336 LTNCAKVVDIPGL--------EHLTALKRL 1357


>gi|357499823|ref|XP_003620200.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355495215|gb|AES76418.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1437

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 209/534 (39%), Positives = 293/534 (54%), Gaps = 53/534 (9%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNT-----VGIW 188
           E  LI+    ++S+KL +L P    D  VG+   I +I S L + S + +      VGI 
Sbjct: 193 EYELIQEITEEMSRKL-NLTPLHIADHPVGLNYKISQIMSLLENKSNDDDDVDVCMVGIC 251

Query: 189 GIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG------------GLANIHLN- 235
           GIGGIGKTT+A A+Y+++S  F+ S F+ ++R+ S K G               NI L+ 
Sbjct: 252 GIGGIGKTTLARAVYNSMSRKFDSSSFVVDVRENSMKHGLVHLQETLLLHLLFENIKLDD 311

Query: 236 ------FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
                   +RRL   KVL++  D+ +L+Q+  L+GR D F  GS++IITTRD  LL  H 
Sbjct: 312 VSKGIPIIKRRLRNKKVLLILDDVDNLQQLRSLVGRRDWFGFGSKIIITTRDKHLLAAHG 371

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              V  ++EVKEL+ ++SL LFS NAF +N P A + E+   V++YA G PLAL V+GS 
Sbjct: 372 ---VKKLYEVKELNDHESLELFSMNAFRKNVPDASYGEIVKCVVQYAKGHPLALNVIGSD 428

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           L G + EEW+SA+NK + +P+ +I  VLKVSYD LDD E+ IFLD ACFFKG  +  V  
Sbjct: 429 LFGKTVEEWKSALNKYETIPNKEILNVLKVSYDNLDDNEKEIFLDIACFFKGYPKADVEK 488

Query: 410 FLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
            LDA RF +K GI  LV KSLVTIS +N + MHDL++++G +I R+ES  DP KR RLWH
Sbjct: 489 TLDASRFYSKYGIGVLVDKSLVTISESNSVKMHDLIEDLGKDIARKESPFDPSKRRRLWH 548

Query: 469 PEDIYQVLNENTSLPT--GINLD--SLK---ELYLGGCSNLKRF-------------PE- 507
            ED+ +VL EN    T  GI LD  +LK   +L      ++KR              P+ 
Sbjct: 549 HEDVLEVLTENMGTDTIEGIVLDMPNLKQEVQLKANTFDDMKRLRILIVRNGQVSGAPQN 608

Query: 508 ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
           +  N+  L+  +  +  LP S  +   LV L+L       ++       + L  +N S C
Sbjct: 609 LPNNLRLLEWNKYPLTSLPDSF-HPKTLVVLNLPKSHI--TMDEPFKKFEHLTFMNFSDC 665

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             L KLP+          L    ++   I  S+  L KL  L  + C  L+S P
Sbjct: 666 DSLTKLPDVSATPNLTRILVNNCENLVDIHESIGDLDKLVTLSTEGCPNLKSFP 719



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 74/104 (71%), Gaps = 1/104 (0%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVF+SF G D R++F  +L   LC++ I TF DD KL +G EIS  L  AI+ S+I+I+
Sbjct: 15  YDVFISFYGDDTRYSFTGYLYNTLCQKGINTFKDDIKLKKGEEISTDLLQAIDESRIAII 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
           + SE YASS WCL+ELVKI+E K + GQ+V  VF+ VDPS+  +
Sbjct: 75  VCSENYASSPWCLDELVKIMECKEEKGQLVCIVFFYVDPSNVRH 118



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 36/205 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           S P G+    L+ L L  CS++  FP++   +E++   D+  TAI++ PSSI N   L +
Sbjct: 717 SFPRGLRSKYLEYLNLRKCSSIDNFPDVLAKVENMKNIDIGGTAIKKFPSSIENFKGLEE 776

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL------------PEEIGNLE---- 581
           L LT+CS ++ + S     +++  LN+ GC +L KL              ++ NL     
Sbjct: 777 LVLTSCSNVEDLPSNTDMFQNIDELNVEGCPQLPKLLWKSLENRTTDWLPKLSNLSLKNC 836

Query: 582 ---------------SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
                           L++L L++ +F  IP  +K LS L  L ++NCK L+ +  LP  
Sbjct: 837 NLSDEDLELILKCFLQLKWLILSDNNFLTIPVCIKDLSHLLLLNIENCKHLRDISVLPPY 896

Query: 627 -SSIHARHCTSLKTLSNSSTLLTRS 650
              I AR C +L T  +S  LL+++
Sbjct: 897 LQYIDARMCMAL-TPHSSEVLLSQA 920


>gi|357499557|ref|XP_003620067.1| Disease resistance-like protein [Medicago truncatula]
 gi|355495082|gb|AES76285.1| Disease resistance-like protein [Medicago truncatula]
          Length = 511

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 180/513 (35%), Positives = 288/513 (56%), Gaps = 79/513 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D RH F  +L  AL  + I TFIDD  L RG+EI+PSL  AI+ S+I I 
Sbjct: 18  YQVFLSFRGTDTRHGFTGNLYKALTDKGIHTFIDDNDLQRGDEITPSLLKAIDESRIFI- 76

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLGWMGIFD 129
                                     G++V+PV + V+P+        Y  +L  +  + 
Sbjct: 77  -----------------------PTKGRLVLPVLFGVEPTIVRHRKGSYGEALAELQRWK 113

Query: 130 IPTSESVLIEGN-----------VNDISKKLSDLF---PSDNKDQLVGVESIIKEIESQL 175
           +  S++  + G            + +I K +S+     P    +  VG++S +++++S L
Sbjct: 114 VALSQAANLSGYHDSPPGYEYEFIGEIVKYISNKTSRQPLHVANYPVGMKSRVQQVKSLL 173

Query: 176 LSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE---------- 224
              S +  + VG++G GG+GK+T+A AIY+ I+  FE S F++N+R+ S           
Sbjct: 174 DERSDDGVHMVGLYGTGGLGKSTLAKAIYNFIADQFECSCFLENVRENSASNKLKHLQLE 233

Query: 225 ----------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSR 274
                     K GG++   + + + RL R KVL++  D+ ++KQ+  L G  D F  GS+
Sbjct: 234 LLLKTLQLEIKFGGVSE-GIPYIKERLHRKKVLLILDDVDNMKQLHALAGGPDWFGRGSK 292

Query: 275 VIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIK 334
           VIITTRD  LL  H G +  H  EV+ L   ++L L    AF  ++  +G+ E+ N  + 
Sbjct: 293 VIITTRDKHLLTCH-GIKSMH--EVEGLYGTEALELLRWMAFKSDNVPSGYEEILNRAVA 349

Query: 335 YANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLD 394
           YA+G+PL ++++GS L G + EEW++ ++   R+P+ +IQK+LKVSYD L++E+Q++FLD
Sbjct: 350 YASGLPLVIEIVGSNLSGKNIEEWKNTLDGYDRIPNKEIQKILKVSYDALEEEQQSVFLD 409

Query: 395 TACFFK----GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI---SNNKITMHDLLQEM 447
            AC FK     + +Y++ +    C  +  +G+  LV KSL+      ++ + +HDL+++M
Sbjct: 410 IACCFKRCKWEDAKYILNSHYGHC-ITHHLGV--LVEKSLIKKLREYDDYVMLHDLIEDM 466

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           G E+VRQESIK+PG+RSRL   +DI +VL ENT
Sbjct: 467 GKEVVRQESIKEPGERSRLCCQDDIVRVLRENT 499


>gi|297840113|ref|XP_002887938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333779|gb|EFH64197.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 965

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 236/761 (31%), Positives = 354/761 (46%), Gaps = 131/761 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSS        ++ VF SF G DVR  F+SHL        I  F D  + RG  ISP
Sbjct: 1   MASSSSPRTW----RYRVFTSFHGPDVRKTFLSHLRKQFICNGITMFDDQGIERGQTISP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L+  I  S+ISIV+ S+ YASS WCL+EL++IL+ K   GQIV+ +FY V PS      
Sbjct: 57  ELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTIFYGVYPSHVR--K 114

Query: 121 SLGWMGI-------------------------------FDIPTSESVLIEGNVNDISKKL 149
             G  GI                               F     ES ++E    D+S KL
Sbjct: 115 QTGEFGIRLSETCDGKTEEERRRWSQALNDVGNIAGEHFLNWDKESKMVEKIARDVSNKL 174

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           +     D +D +VG+E+ +++++S L L        VGI G  GIGKTTIA A++S +SS
Sbjct: 175 NTTISKDFED-MVGIEAHLQKMQSLLHLDNEDGAIIVGICGPSGIGKTTIARALHSRLSS 233

Query: 209 HFEGSYFMQNIRDES----EKVG-----------------GLANIHLNFERRRLSRMKVL 247
            F+ + FM+N++  S    ++ G                  L   HL     RL   KVL
Sbjct: 234 SFQLTCFMENLKGSSNSGLDEYGLKLCLQQQLLSKILNQNDLRIFHLGAIPERLCDQKVL 293

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           I+  D+ DL+Q++ L      F PGSR+I+TT D +LL+ H    + + + V   +  ++
Sbjct: 294 IILADVDDLQQLEALANETSWFGPGSRIIVTTEDQELLEQHD---INNTYHVDFPTTKEA 350

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
             +F R+AF Q+    GF +L   VIK  + +PL L+V+GS L+   E++WES +++L+ 
Sbjct: 351 RKIFCRSAFRQSSAPYGFEKLVERVIKLCSNLPLGLRVMGSSLRRKKEDDWESILHRLEN 410

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
                I+ VL+V YD L   +Q +FL  A FF   D   V   L       + G+  L  
Sbjct: 411 SLDRKIEGVLRVGYDNLHKNDQFLFLLIAFFFNNQDNDHVKAMLGGSNLDVRYGLKTLTY 470

Query: 428 KSLVTIS-NNKITMHDLLQEMGGEIV-RQESIK----------------DPGKRSRLWHP 469
           KSL+ IS   +I MH LLQ++G E V RQ++ K                D G R+ +   
Sbjct: 471 KSLIQISIKGEIMMHKLLQQVGKEAVQRQDNGKRQILIDTDEICDVLENDSGSRNVMGIS 530

Query: 470 EDIYQVLNE--------------------NTSLPTGINLDSLKEL-------------YL 496
            DI  +LN+                     T   T + L   +++             Y 
Sbjct: 531 FDISTLLNDVYISAEAFKRIRNLQFLSIYKTRFDTNVRLHLSEDMVFPPQLRLLHWEVYP 590

Query: 497 GGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNL 556
           G C      PE    + +L+L++  +E+L   I  L+ L  ++L     LK +   L + 
Sbjct: 591 GKCLPHTFRPEY---LVELNLRDNQLEKLWEGIQPLTNLKKMELLRSCHLKELPD-LSDA 646

Query: 557 KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
            +L  LNL+ C  L ++P   GNL  LE L +      K+  +   L+ L  L +  C +
Sbjct: 647 TNLEVLNLARCESLVEIPPSFGNLHKLEKLIMDFCRKLKVVPTHFNLASLESLGMMGCWQ 706

Query: 617 LQSLPELPCGSSIHARHCTSLKTLSNSSTL---LTRSSKHW 654
           L+ +P++           T++ TLS + T+   LT S + W
Sbjct: 707 LKKIPDIS----------TNITTLSMTDTMLEDLTESIRLW 737



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 92/206 (44%), Gaps = 43/206 (20%)

Query: 477 NENTSLPTGIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNL 532
           N+   L  GI  L +LK++ L    +LK  P++S   N+E L+L    ++ E+P S GNL
Sbjct: 611 NQLEKLWEGIQPLTNLKKMELLRSCHLKELPDLSDATNLEVLNLARCESLVEIPPSFGNL 670

Query: 533 SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE-------- 584
            +L  L +  C  LK V +   NL SL  L + GC +L+K+P+   N+ +L         
Sbjct: 671 HKLEKLIMDFCRKLKVVPTHF-NLASLESLGMMGCWQLKKIPDISTNITTLSMTDTMLED 729

Query: 585 -----------------------------YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
                                        YL     D EKIP  +K L  L +L +  C 
Sbjct: 730 LTESIRLWSGLQVLDIYGSVNIYHATAEIYLEGRGADIEKIPYCIKDLDGLKELHIYGCP 789

Query: 616 RLQSLPELPCG-SSIHARHCTSLKTL 640
           ++ SLPELP     +    C SL+TL
Sbjct: 790 KIASLPELPSSLKRLIVDTCESLETL 815


>gi|297794609|ref|XP_002865189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311024|gb|EFH41448.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 190/537 (35%), Positives = 274/537 (51%), Gaps = 70/537 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           M   SSS N +    +DVF SF G+DVR  F+SHL   L R+ I  F D+++ RG  + P
Sbjct: 1   MDPWSSSYNWV----YDVFPSFSGEDVRLTFLSHLLKELDRKMIIAFKDNEIPRGQSLDP 56

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYG-QIVVPVFYLVDPS----- 114
            L  AI  S+I++V+FS+ YASS WCLNEL++I++ K ++G Q+V+PVFY +DPS     
Sbjct: 57  ELKQAIRDSRIAVVVFSKNYASSTWCLNELLEIVQYKEEFGRQMVIPVFYDLDPSHVRKQ 116

Query: 115 --DAG-----YCPS-------------------LGWMGIFDIPTSESVLIEGNVNDISKK 148
             D G      C +                   LG+  +  +  +E+ +IE   ND+S K
Sbjct: 117 TGDFGKIFQETCKNKTEDVINRWKKALTDVANILGYHSVTQV--NEAKMIEEIANDVSGK 174

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
           L  L  S + +  VG+E  I  +   L   S E   +GIWG  GIGKTTIA  +++ IS 
Sbjct: 175 LL-LTTSKDFEDFVGIEDHIANMSELLELESEEVRMLGIWGSSGIGKTTIARTLFNRISR 233

Query: 209 HFEGSYFMQ--------------NIRDESEKVGGLANI-------------HLNFERRRL 241
           HF+GS F+               N  D + K+    N              HL     RL
Sbjct: 234 HFQGSIFIDRAFISKSMESYSRANPDDYNMKLHLQGNFLSKLLKKKDIEINHLGALEERL 293

Query: 242 SRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKE 301
              KVLI   DL DL  +++L G+   F  GSR+I+ T D   L  H    +  ++EV  
Sbjct: 294 RHQKVLIFIDDLDDLMVLEVLAGQTQWFGCGSRIIVVTTDKYFLTAHD---IDLIYEVGL 350

Query: 302 LSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
                +L +F R+AF Q +P  G +E ++ V+  A  +PL L VLGS L+G+++++  + 
Sbjct: 351 PPIKLALEMFCRSAFKQKYPPDGLMEFASEVVNRAGSLPLGLNVLGSSLRGLNKDDCMNM 410

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEE-QNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
           + + +R     I+K L+VSYDGL  EE + IF   +C F   +   +  FL        I
Sbjct: 411 LPRFRRSLDGKIEKTLRVSYDGLSREEDKAIFRHISCLFNHVETKDIKLFLADSELDVNI 470

Query: 421 GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
           G+  LV K L+     K+ MH LL+EMG  IVR +SI  P +R  L   +DI  VL 
Sbjct: 471 GLKNLVDKCLIHERWGKVEMHCLLEEMGRNIVRIQSIDKPERREFLVDSKDICDVLT 527


>gi|4588070|gb|AAD25976.1|AF093649_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1294

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 175/527 (33%), Positives = 280/527 (53%), Gaps = 58/527 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++     P  +++VFLSFRG D R  F   L   LCR KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGSFPSVEYEVFLSFRGPDTREQFTDFLYHFLCRYKIHTFRDDDELRKGEEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGW---MGIFDIPT----SESVLIEGNV-------NDISKKLSDLFPSD----- 156
              C    +      FD  T     +++   G++       ND    ++D   +D     
Sbjct: 166 QTGCYKKAFRKHANKFDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADEVLADIWSHI 225

Query: 157 -------NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                    D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ ISS 
Sbjct: 226 SKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSC 285

Query: 210 FEGSYFMQNIRDESEKVGGLANIH--LNFE---------------------RRRLSRMKV 246
           F+   F+ NIR+  ++  G+  +   L +E                     + R+SR K+
Sbjct: 286 FDRCCFIDNIRETQDQKDGVVVLQKKLVYEILRIDSGSVGFNNDSGGRKMIKERVSRFKI 345

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L+V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV  +S   
Sbjct: 346 LVVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGSMSKPR 404

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           SL LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       WE  + +L 
Sbjct: 405 SLELFSKHAFKKNTPPSDYETLANDVVDTTAGLPLTLKVIGSLLFKQEIGVWEDTLEQLC 464

Query: 367 RMPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           +  ++D +   LK+SYD L  E + IFLD ACFF G ++         C F     I+ L
Sbjct: 465 KTLNLDEVYDRLKISYDALKPEAKEIFLDIACFFIGKNKEEPYYMWTDCNFYPASNITFL 524

Query: 426 VGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           + + ++ +  +++  MHD L++MG EIVR+E ++ P KRSR+W  E+
Sbjct: 525 IQRCMIQVGDDDEFEMHDQLRDMGREIVRREDVR-PWKRSRIWSREE 570



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 32/205 (15%)

Query: 444  LQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLK 503
            LQ++   +V+  S+++      L   +D+Y  L   TSL   + L+ LKEL +GGC +L 
Sbjct: 1064 LQKLTTLVVKVPSLREIEGLEELKSLQDLY--LEGCTSLGR-LRLEKLKELDIGGCPDLT 1120

Query: 504  RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK--SVSSRLCNLKSLRR 561
                                EL  ++  +  L  L + +C  L+   +   L N   L  
Sbjct: 1121 --------------------ELVQTVVAVPSLRGLTIRDCPRLEVGPMIQSLPNFPMLDE 1160

Query: 562  LNLSGCLKLEKLPEEIGNLESLEYLNLAEKD----FEKIPSSMKQLSKLSDL--RLQNCK 615
            L LS  +  E   + IG+LE L  L L   D     E+I +S+ +L KL+ L   + + +
Sbjct: 1161 LTLSMVIITEDDLDVIGSLEELVRLELVLDDTSSGIERI-ASLSKLQKLTTLIVEVPSLR 1219

Query: 616  RLQSLPELPCGSSIHARHCTSLKTL 640
             ++ L EL     ++ + CTSL+ L
Sbjct: 1220 EIEGLAELKSLQRLYLQGCTSLERL 1244


>gi|13517483|gb|AAK28812.1|AF310968_1 resistance-like protein PH-B [Linum usitatissimum]
          Length = 1202

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 180/539 (33%), Positives = 285/539 (52%), Gaps = 73/539 (13%)

Query: 4   SSSSINMIPHP---KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           SSS+    P+    ++DVFL FRG D RH F SHL +AL  ++I TFID KL +   I  
Sbjct: 6   SSSAPRTSPYTGEWEYDVFLCFRG-DTRHGFTSHLLSALSDKQIRTFIDHKLAKTESID- 63

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L S ++   +S+V+FSE +A S WCL E+V I E   K G  V+PVFY VDP D     
Sbjct: 64  ELISILQRCALSVVVFSEKFADSVWCLEEVVTIAERMKKVGHRVLPVFYKVDPFDVTDEP 123

Query: 117 -GYCPSLG---------------WMGIFDIPTS-----------ESVLIEGNVNDISKKL 149
             Y  ++                WM   +   +           ES LI+  V  + K+L
Sbjct: 124 RSYMATIDREYKARSSFLEDKKRWMDAVNAVANCAGHTSQAIKIESELIKAVVETVQKQL 183

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISS 208
            D+ PS N++ LV + S I EIE  L +    +   +G+WG+GG+GKTT+A A Y  ++S
Sbjct: 184 IDMSPSINRNNLVAMSSRIFEIERLLAMDKLDDTCIIGLWGMGGVGKTTLAEACYDRVTS 243

Query: 209 HFEG--SYFMQNIRDESEKVGGLANI-------------------HLNFERRRLSRMKVL 247
             +G    F++N+ +  EK  G+  I                   ++ + R RLS ++V 
Sbjct: 244 SNKGIKHLFVRNVNEICEKHHGVEKIVHKLYSKLLDENNIDREDLNIAYRRERLSHLRVF 303

Query: 248 IVFYDLTDLKQID-LLIGRL----DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
           +V  ++  L+Q++ L +G +      F  GSR+IITTR+ ++L+N     +  ++ V+ L
Sbjct: 304 VVLDNVETLEQLEQLALGYVFNLSKVFAAGSRIIITTRNKKVLQN----AMAKIYNVECL 359

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAV 362
           +  +S  LFS +AF Q+ P   ++  S +   Y  G PLAL++LG  L G     W S +
Sbjct: 360 NDEESTRLFSLHAFKQDRPQDNWMGKSRLATSYCKGNPLALKILGGALFGEDVHYWRSLL 419

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
             L++  ++ ++ +L+ SYD L  EE+ IFLD AC   G  +  +++++     S+ + +
Sbjct: 420 TGLRQSGNLGMETILRRSYDKLGKEEKKIFLDVACLLNGMSKSRLIDYMATMYSSSYVKV 479

Query: 423 SRLVGKSLVTI----SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
             L+ KSL+T     +   I +H LL+EM   IV++E     GKRSRL  P+D++++L+
Sbjct: 480 KDLIDKSLLTCVPSENGEMIEVHGLLKEMAWNIVKEEP--KLGKRSRLVDPDDVHKLLS 536



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 7/149 (4%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            +++L  L++  C +L   P    N+  L    L ET I+ LPSSI  L +L  ++L  C 
Sbjct: 894  MNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCLSETGIKSLPSSIQELRQLHMIELRYCE 953

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
             L+S+ + +  L  L   ++SGC  +  LPE   NL+ L+      K  + +PS+  +L 
Sbjct: 954  SLESIPNSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSRC--KSLQALPSNTCKLL 1011

Query: 605  KLSDLRLQNCKRL-QSLP-ELPCGSSIHA 631
             L+ +  + C +L Q++P E      +HA
Sbjct: 1012 YLNTIHFEGCPQLDQAIPAEFVANFLVHA 1040



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 4/137 (2%)

Query: 522  IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
            IE LP     ++ L  L +  C  L S+ + + NL+SL  L LS    ++ LP  I  L 
Sbjct: 884  IESLPEISEPMNTLTSLHVYCCRSLTSIPTSISNLRSLGSLCLSET-GIKSLPSSIQELR 942

Query: 582  SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
             L  + L   +  E IP+S+ +LSKL    +  C+ + SLPELP     +    C SL+ 
Sbjct: 943  QLHMIELRYCESLESIPNSIHKLSKLVTFSMSGCEIIISLPELPPNLKELDVSRCKSLQA 1002

Query: 640  L-SNSSTLLTRSSKHWD 655
            L SN+  LL  ++ H++
Sbjct: 1003 LPSNTCKLLYLNTIHFE 1019



 Score = 40.0 bits (92), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 27/143 (18%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDL-KETAIEELPSSIGNLSR 534
           E    P  +NL  L   Y   C+N+   P+IS   NIE+L L    ++ E+P  +  L++
Sbjct: 684 EGYDQPQLVNLIVLDLCY---CANIIAIPDISSSLNIEELLLFGCKSLVEVPFHVQYLTK 740

Query: 535 LVDLDLTNCSGLKSVSS----------RLCNL----------KSLRRLNLSGCLKLEKLP 574
           LV LD+++C  LK +            R+ NL          + L   +LSG   L +LP
Sbjct: 741 LVTLDISHCENLKPLPPKLDSKLLKHVRMKNLEVTCCPEIDSRELEEFDLSGT-SLGELP 799

Query: 575 EEIGNLESLEYLNLAEKDFEKIP 597
             I N++    L+L  K+  K P
Sbjct: 800 SAIYNIKQNGVLHLHGKNITKFP 822


>gi|862904|gb|AAA91021.1| L6tr [Linum usitatissimum]
          Length = 705

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 184/559 (32%), Positives = 295/559 (52%), Gaps = 65/559 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           ++ S++     P  +++VFLSFRG D R  F   L  +L R KI TF DD +L +G EI 
Sbjct: 46  ISDSTNPSGSFPSVEYEVFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQ-IVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +  + I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGW---MGIFDIPT----SESVLIEGNV-------NDISKKLSDLFPSD----- 156
              C    +      FD  T     +++   G++       ND    ++D   +D     
Sbjct: 166 QTGCYKKAFRKHANKFDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADKVSADIWSHI 225

Query: 157 -------NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
                    D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y+ ISS 
Sbjct: 226 SKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSC 285

Query: 210 FEGSYFMQNIRDESEKVGGL---------------ANIHLNFE-------RRRLSRMKVL 247
           F+   F+ NIR+  EK G +                ++  N +       + R+SR K+L
Sbjct: 286 FDCCCFIDNIRETQEKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKTIKERVSRFKIL 345

Query: 248 IVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDS 307
           +V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV  +S   S
Sbjct: 346 VVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGSMSKPRS 404

Query: 308 LTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           L LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       WE  + +L+R
Sbjct: 405 LELFSKHAFKKNTPPSYYETLANDVVDTTAGLPLTLKVIGSLLFKQEIAVWEDTLEQLRR 464

Query: 368 MPHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
             ++D +   LK+SYD L+ E + IFLD ACFF G ++         C F     I  L+
Sbjct: 465 TLNLDEVYDRLKISYDALNPEAKEIFLDIACFFIGQNKEEPYYMWTDCNFYPASNIIFLI 524

Query: 427 GKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED-IYQVLNEN----- 479
            + ++ +  +++  MHD L++MG EIVR+E +  P KRSR+W  E+ I  +LN+      
Sbjct: 525 QRCMIQVGDDDEFKMHDQLRDMGREIVRREDVL-PWKRSRIWSAEEGIDLLLNKKGSSKV 583

Query: 480 --TSLPTGINLDSLKELYL 496
              S+P G+  +   E +L
Sbjct: 584 KAISIPWGVKYEFKSECFL 602


>gi|9954759|gb|AAG09110.1|AC009323_21 Putative disease resistance protein - partial protein [Arabidopsis
           thaliana]
          Length = 889

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 228/737 (30%), Positives = 368/737 (49%), Gaps = 109/737 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS     + +++VF SF G DVR  F+SHL        I  F D+ + R   I+P
Sbjct: 1   MASSSSSPR---NWRYNVFTSFHGPDVRIKFLSHLRQQFIYNGITMFDDNGIERSQIIAP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L  AI  S+I+I++ S+ YASS W L+EL++IL+ K   GQIV+ VFY VDPSD     
Sbjct: 58  ALKKAIGESRIAILLLSKNYASSSWSLDELLEILKCKEDIGQIVMTVFYEVDPSDVRNQT 117

Query: 117 --------------------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSD 151
                                +  +L ++G      F    +E+ +IE    D+S  L +
Sbjct: 118 GDFGIAFKETCAHKTEEERQKWTQALTYVGNIAGEDFKHWPNEAKMIEKIARDVSDIL-N 176

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + P  + D +VG+   ++E+ES L   +     VGI G  GIGK+TIA+A++  +S+ F+
Sbjct: 177 VTPCRDFDGMVGLNDHLREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQ 236

Query: 212 GSYFMQNIRDESEKVG----------------------GLANIHLNFERRRLSRMKVLIV 249
            + F+ N+R ES K+G                       +   HL+  + RL  ++VLI+
Sbjct: 237 RTCFVDNLR-ESYKIGLDEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDLRVLII 295

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+  L Q++ L   +  F PGSRVI+TT + ++L  H    +  ++ V   S  ++L 
Sbjct: 296 LDDVEHLYQLEAL-ADIRWFGPGSRVIVTTENREILLQHG---IKDIYHVGFPSEGEALM 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +F  +AF Q  P  GFL+L+  V      +PL L VLG+ L G S+ +W   + +LK   
Sbjct: 352 IFCLSAFRQPSPPYGFLKLTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCL 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGK 428
              I+ VLKV Y+ L +++Q +FL  A +F  +    V + L+       ++G+ +L  +
Sbjct: 412 DGRIESVLKVGYESLYEKDQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANR 471

Query: 429 SLVTIS-----NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE----N 479
            L+ I       +++ M+ LLQ M  E++ ++ I    KR  L  P+DI  VL E     
Sbjct: 472 CLIQIDIDHNRKSRVVMNRLLQVMAREVISKQKI---SKRKILEDPQDICYVLEEAKGKG 528

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNI-----------EDLDLKETAIEELPSS 528
           ++L   +++  +KEL +    N K F ++ CN+            D  L      ELPSS
Sbjct: 529 SALGLSLDVAEIKELVI----NKKAFKKM-CNLLILKVFNGTDPRDSKLHVPEEMELPSS 583

Query: 529 IGNL--------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           I  L                LV L++   S L+ +      L +L+ +NL G   L++LP
Sbjct: 584 IRLLHWEAYPRKSFRFGPENLVTLNMEY-SELEKLWKGTQPLANLKEMNLCGSSCLKELP 642

Query: 575 EEIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IH 630
            ++    +LE L++AE +   +IPSS+  L K+ +L +++C+ L+ +P L   +S   I+
Sbjct: 643 -DLSKAANLERLDVAECNALVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIIN 701

Query: 631 ARHCTSLKTLSNSSTLL 647
              C  LK+  +  T L
Sbjct: 702 IHDCPRLKSFPDVPTSL 718



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 33/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SLK + +  C  LK FP++  ++E+L +++T ++ELP+S  + + +  L + 
Sbjct: 688 IPTLINLASLKIINIHDCPRLKSFPDVPTSLEELVIEKTGVQELPASFRHCTGVTTLYIC 747

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +   LK+ S+ L     LR+L+LS C                          E +  S+K
Sbjct: 748 SNRNLKTFSTHLP--MGLRKLDLSNC------------------------GIEWVTDSIK 781

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            L  L  L+L  CKRL SLPELPC    + A  CTSL+ +S+S  +          FNF 
Sbjct: 782 DLHNLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQ------FNFI 835

Query: 661 NC 662
            C
Sbjct: 836 KC 837


>gi|334183385|ref|NP_001185252.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332195282|gb|AEE33403.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1117

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 230/737 (31%), Positives = 370/737 (50%), Gaps = 109/737 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS     + +++VF SF G DVR  F+SHL        I  F D+ + R   I+P
Sbjct: 1   MASSSSSPR---NWRYNVFTSFHGPDVRIKFLSHLRQQFIYNGITMFDDNGIERSQIIAP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L  AI  S+I+I++ S+ YASS W L+EL++IL+ K   GQIV+ VFY VDPSD     
Sbjct: 58  ALKKAIGESRIAILLLSKNYASSSWSLDELLEILKCKEDIGQIVMTVFYEVDPSDVRNQT 117

Query: 117 --------------------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSD 151
                                +  +L ++G      F    +E+ +IE    D+S  L +
Sbjct: 118 GDFGIAFKETCAHKTEEERQKWTQALTYVGNIAGEDFKHWPNEAKMIEKIARDVSDIL-N 176

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + P  + D +VG+   ++E+ES L   +     VGI G  GIGK+TIA+A++  +S+ F+
Sbjct: 177 VTPCRDFDGMVGLNDHLREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQ 236

Query: 212 GSYFMQNIRDESEKVG-------------GLANI---------HLNFERRRLSRMKVLIV 249
            + F+ N+R ES K+G              LA +         HL+  + RL  ++VLI+
Sbjct: 237 RTCFVDNLR-ESYKIGLDEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDLRVLII 295

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+  L Q++ L   +  F PGSRVI+TT + ++L  H    +  ++ V   S  ++L 
Sbjct: 296 LDDVEHLYQLEAL-ADIRWFGPGSRVIVTTENREILLQHG---IKDIYHVGFPSEGEALM 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +F  +AF Q  P  GFL+L+  V      +PL L VLG+ L G S+ +W   + +LK   
Sbjct: 352 IFCLSAFRQPSPPYGFLKLTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCL 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGK 428
              I+ VLKV Y+ L +++Q +FL  A +F  +    V + L+       ++G+ +L  +
Sbjct: 412 DGRIESVLKVGYESLYEKDQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANR 471

Query: 429 SLVTIS-----NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE----N 479
            L+ I       +++ M+ LLQ M  E++ ++ I    KR  L  P+DI  VL E     
Sbjct: 472 CLIQIDIDHNRKSRVVMNRLLQVMAREVISKQKI---SKRKILEDPQDICYVLEEAKGKG 528

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNI-----------EDLDLKETAIEELPSS 528
           ++L   +++  +KEL +    N K F ++ CN+            D  L      ELPSS
Sbjct: 529 SALGLSLDVAEIKELVI----NKKAFKKM-CNLLILKVFNGTDPRDSKLHVPEEMELPSS 583

Query: 529 IGNL--------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           I  L                LV L++   S L+ +      L +L+ +NL G   L++LP
Sbjct: 584 IRLLHWEAYPRKSFRFGPENLVTLNM-EYSELEKLWKGTQPLANLKEMNLCGSSCLKELP 642

Query: 575 EEIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IH 630
            ++    +LE L++AE +   +IPSS+  L K+ +L +++C+ L+ +P L   +S   I+
Sbjct: 643 -DLSKAANLERLDVAECNALVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIIN 701

Query: 631 ARHCTSLKTLSNSSTLL 647
              C  LK+  +  T L
Sbjct: 702 IHDCPRLKSFPDVPTSL 718



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 33/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SLK + +  C  LK FP++  ++E+L +++T ++ELP+S  + + +  L + 
Sbjct: 688 IPTLINLASLKIINIHDCPRLKSFPDVPTSLEELVIEKTGVQELPASFRHCTGVTTLYIC 747

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +   LK+ S+ L     LR+L+LS C                          E +  S+K
Sbjct: 748 SNRNLKTFSTHLP--MGLRKLDLSNC------------------------GIEWVTDSIK 781

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            L  L  L+L  CKRL SLPELPC    + A  CTSL+ +S+S  +          FNF 
Sbjct: 782 DLHNLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQ------FNFI 835

Query: 661 NC 662
            C
Sbjct: 836 KC 837


>gi|4588056|gb|AAD25969.1|AF093642_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1581

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 216/697 (30%), Positives = 340/697 (48%), Gaps = 106/697 (15%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSK 70
           P  +++VFLSFRG D R  F   L   L R KI TF DD +L +G EI P+L  AI+ SK
Sbjct: 57  PSVEYEVFLSFRGPDTREQFTDFLYQFLRRYKIHTFRDDDELRKGKEIGPNLLRAIDQSK 116

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY---CPSLGW-- 124
           I + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +   C    +  
Sbjct: 117 IYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRHQTGCYKKAFRK 176

Query: 125 -MGIFDIPT----SESVLIEGNV-------NDISKKLSDLFPSD------------NKDQ 160
               FD  T     +++   G++       ND    ++D   +D              D+
Sbjct: 177 HANKFDGQTIQNWKDALKKVGDLKGWHIGKNDKQGAIADEVLADIWSHISKENLILETDE 236

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           LVG++  I  +  ++   S     VG++G+GGIGKTT A A+Y+ ISS F+   F+ NIR
Sbjct: 237 LVGIDDHITAVLEKMSLDSENVTMVGLYGMGGIGKTTTAKAVYNKISSCFDRCCFIDNIR 296

Query: 221 DESEKVGGLANIH--------------LNFE---------RRRLSRMKVLIVFYDLTDLK 257
           +  ++  G+  +               + F          + R+SR K+L+V  D+ +  
Sbjct: 297 ETQDQKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKMIKERVSRFKILVVLDDVDEKF 356

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           + + ++G    F+  SR IIT+R +++L     ++   ++EV  +S   SL LFS++AF 
Sbjct: 357 KFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVGSMSKPRSLELFSKHAFK 415

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD-IQKV 376
           +N P + +  L+N V+    G+PL L+V+GS L       WE  + +L++  ++D +   
Sbjct: 416 KNTPPSDYEILANDVVDTTAGLPLTLKVIGSLLFKQKIGVWEDTLEQLRKTLNLDEVYDR 475

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           LK+SYD L  E + IFLD ACFF G  +         C F     I+ L+ + ++ + NN
Sbjct: 476 LKISYDALKPEAKEIFLDIACFFIGEKKEEPYYMWTDCNFYPASNITFLIQRCMIQVGNN 535

Query: 437 -KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED-IYQVLNEN-------TSLPTG-- 485
            +  MHD L++MG EIVR+E ++ P KRSR+W  E+ I  +LN+         S+  G  
Sbjct: 536 DEFKMHDQLRDMGREIVRREDVR-PWKRSRIWSAEEGIDLLLNKKGSSKVKAISIICGAD 594

Query: 486 --------INLDSLKELY-----LGG-----CSNLK--RFPEISCNIEDLDLKETAIEEL 525
                   +NL  L+ LY     L G       NLK    P      +D  L    ++ L
Sbjct: 595 YEFKSECFLNLSELRYLYATFAMLTGDFNNLLPNLKWLELPVYDHGEDDPPLTNFTMKNL 654

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK-------SLRRLNLSGCLKLEKLPEEIG 578
              I   SR+   D      +  +  RL  ++       S R   LSGC +  K      
Sbjct: 655 IIVILEYSRITADDWGGWRNMMKMPERLKVVRLSSNYSSSGRLFRLSGCWRFPK------ 708

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
              S+E L++ E + +++   + +L KL  L L  CK
Sbjct: 709 ---SIEILSMTEIEMDEV--DIGELKKLKTLVLGLCK 740



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 43/173 (24%)

Query: 490  SLKELYLGGCSNLKRFPEISC-----NIEDLDLKETAI--EELPSSIGNLSRLVDLDLT- 541
            S+ EL +  C  L+  P I        ++ LDL    I  EE   +IG+L  LV L+L  
Sbjct: 989  SMAELTISDCPRLEVGPMIRSLPKFPMLKKLDLAVANITKEEDLDAIGSLEELVRLELVL 1048

Query: 542  --NCSGLKSVSSR---------------------LCNLKSLRRLNLSGCLKLEKLPEEIG 578
               CSG++ ++S                      L  LKSL+RL L GC  L +LP    
Sbjct: 1049 DDTCSGIERIASLSKLQKLTTLVVKVPSLREIEGLAELKSLQRLILVGCTSLGRLP---- 1104

Query: 579  NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL------QSLPELP 624
             LE L+ L++    D  ++  ++  +  L +L +++C RL      QSLP+ P
Sbjct: 1105 -LEKLKELDIGGCPDLAELVQTVVAVPSLVELTIRDCPRLEVGPMIQSLPKFP 1156



 Score = 43.1 bits (100), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 31/188 (16%)

Query: 486  INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
            + L+ LKEL +GGC +L                     EL  ++  +  LV+L + +C  
Sbjct: 1387 LRLEKLKELDIGGCPDLT--------------------ELVQTVVAVPSLVELTIRDCPR 1426

Query: 546  LK--SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD----FEKIPS 598
            L+   +   L N   L  L LS   +  E   E +G+LE L  L L   D     E+I S
Sbjct: 1427 LEVGPMIQSLPNFPMLNELTLSMVNITKEDELEVLGSLEELRSLWLKLDDTCSSIERI-S 1485

Query: 599  SMKQLSKLSDLRLQ--NCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDI 656
            S+ +L KL+ L+++  + + ++ L EL    S++ + CTSL+ L      L  S K+  +
Sbjct: 1486 SLSKLQKLTRLKVEVPSLREIEGLAELKSLQSLYLQGCTSLERLWPDQQQLG-SLKNLIV 1544

Query: 657  FNFSNCSN 664
             N   C +
Sbjct: 1545 INIRGCKS 1552



 Score = 38.9 bits (89), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 43/179 (24%)

Query: 484  TGINLDSLKELYLGGCSNLKRFPEIS-------CNIEDLDLKETAIEELPSSIGNLSRLV 536
            T + + SL EL +  C  L+  P I         N   L +     E+  + +G+L  L 
Sbjct: 1125 TVVAVPSLVELTIRDCPRLEVGPMIQSLPKFPMLNKLTLSMVNITKEDELAVLGSLEELD 1184

Query: 537  DLDLT---NCSGLKSVS---------------------SRLCNLKSLRRLNLSGCLKLEK 572
             L L     CSG++ +S                       L  LKSL+RL L GC  L +
Sbjct: 1185 SLVLKLDDTCSGIERISFLSKLQKLTTLVVEVPSLREIEGLAELKSLQRLILVGCTSLGR 1244

Query: 573  LPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL------QSLPELP 624
            LP     LE L+ L++    D  ++  ++  +  L +L +++C RL      QSLP+ P
Sbjct: 1245 LP-----LEKLKELDIGGCPDLAELVQTVVAVPSLVELTIRDCPRLEVGPMIQSLPKFP 1298


>gi|224116210|ref|XP_002331988.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832112|gb|EEE70589.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1017

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 176/534 (32%), Positives = 273/534 (51%), Gaps = 116/534 (21%)

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE-SEKVGGLANIHLNFERRRLSRMKVLI 248
           +GGIGKTT+A  +Y  I   FEGS F+ N+R+  +EK G          RRRL    +  
Sbjct: 1   MGGIGKTTVARVVYDRIRWQFEGSCFLANVREVFAEKDG----------RRRLQEQLLSE 50

Query: 249 VFY-----------------------------DLTDLKQIDLLIGRLDGFVPGSRVIITT 279
           +                               D+ D +Q++ L      F PGSR+IIT+
Sbjct: 51  ILMERASVWDSSRGIEMIKRRLRLKKILLILDDVDDKEQLEFLAEEPGWFGPGSRIIITS 110

Query: 280 RDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGV 339
           RD +++  +  +R+   +E ++L+ +D+L LFS+ A   +HPA  F+ELS  V+ YANG+
Sbjct: 111 RDKKVVTGNNNNRI---YEAEKLNDDDALMLFSQKASKNDHPAEDFVELSKQVVGYANGL 167

Query: 340 PLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF 399
           PLAL+V+GS+L   S  EW+SA+N++  +PH  I  VL++S+DGL + ++ IFLD ACF 
Sbjct: 168 PLALEVIGSFLYDRSIPEWKSAINRMNEIPHGKIIDVLRISFDGLHESDKKIFLDIACFL 227

Query: 400 KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKD 459
            G     +   L++  F A IGI  L+ KSL+++S +++ MH+LLQ MG EIVR ES ++
Sbjct: 228 MGFKIDRITRILESRGFHAGIGIPILIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEE 287

Query: 460 PGKRSRLWHPEDIYQVLNENT--------------------------------------- 480
           PG+RSRLW  ED+   L +NT                                       
Sbjct: 288 PGRRSRLWTYEDVCLALMDNTAQWNMKAFSKMSKLRLLKINNVQLSEGPEDLSNKLRFLE 347

Query: 481 -------SLPTGINLDSLKELYLG---------GCS--------------NLKRFPEIS- 509
                  SLP G+ +D L EL++          GC               NL + P+ + 
Sbjct: 348 WHSYPSKSLPAGLQVDELVELHMANSSIEQLWYGCKSAVNLKIINLSNSLNLIKTPDFTG 407

Query: 510 -CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
             N+E+L L+  T++ E+  S+    +L  ++L +C  ++ + S L  ++SL+   L GC
Sbjct: 408 IPNLENLILEGCTSLSEVHPSLARHKKLQHVNLVHCQSIRILPSNL-EMESLKVFTLDGC 466

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            KLE+ P+ +GN+  L  L L      ++ SS++ L  L  L + NCK L+S+P
Sbjct: 467 SKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLLSMTNCKNLESIP 520



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 88/145 (60%), Gaps = 3/145 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GCS L+RFP+I  N+     L L  T I EL SSI +L  L  L
Sbjct: 449 LPSNLEMESLKVFTLDGCSKLERFPDIVGNMNCLMVLRLDGTGIAELSSSIRHLIGLGLL 508

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            +TNC  L+S+ S +  LKSL++L+LS C  L+ +PE +G +ESLE  +++     ++P+
Sbjct: 509 SMTNCKNLESIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDVSGTSIRQLPA 568

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL 623
           S+  L  L  L L  CKR+  LP L
Sbjct: 569 SVFLLKNLKVLSLDGCKRIVVLPSL 593



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 21/194 (10%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L  CS LK  PE    +E L   D+  T+I +LP+S+  L  L 
Sbjct: 518 SIPSSIGCLKSLKKLDLSCCSALKNIPENLGKVESLEEFDVSGTSIRQLPASVFLLKNLK 577

Query: 537 DLDLTNCSGLKSVSS--RLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDF 593
            L L  C  +  + S  RLC   SL  L L  C L+  +LPE+IG L SL  L+L++ +F
Sbjct: 578 VLSLDGCKRIVVLPSLSRLC---SLEVLGLRACNLREGELPEDIGYLSSLRSLDLSQNNF 634

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
             +P ++ QLS+L  L L++C  L SLPE+P    +++   C SLKT+ +   L   SSK
Sbjct: 635 VSLPKAINQLSELEMLVLEDCTMLASLPEVPSKVQTVNLNGCRSLKTIPDPIKL--SSSK 692

Query: 653 H--------WDIFN 658
                    W+++N
Sbjct: 693 RSEFLCLNCWELYN 706


>gi|15234324|ref|NP_195338.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|2961374|emb|CAA18121.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270567|emb|CAB81524.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661225|gb|AEE86625.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1179

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 238/803 (29%), Positives = 354/803 (44%), Gaps = 188/803 (23%)

Query: 14  PKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISI 73
           P+H VFL+FRGK +R+ FVSHL  AL R+ I  FID    +G ++S +L S I+ S+I++
Sbjct: 17  PQHQVFLNFRGKQLRNGFVSHLEKALRRDGINVFIDRNETKGRDLS-NLFSRIQESRIAL 75

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----GYCPSLGW----- 124
            IFS  Y  S WCL+ELVKI +  +    +V+P+FY+VD  D     G      W     
Sbjct: 76  AIFSSMYTESYWCLDELVKIKDCVDLGTLVVIPIFYMVDTDDVKNLKGAFGYTFWKLAKT 135

Query: 125 ----------MGIFDIP----------TSESVLIEGNVNDISKKLS-------------- 150
                       + D+P          + E   I   V ++ K LS              
Sbjct: 136 CNGEKLDKWKQALKDVPKKLGFTLSEMSDEGESINQIVGEVIKVLSSDVMPDLEREIPID 195

Query: 151 DLFPS---------DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASA 201
           D FP+         D+   L G+E+ +K++E +L     +  T+G+ G+ GIGKTT+ S 
Sbjct: 196 DPFPTGEQVPEAAPDSPPPLFGIETRLKQLEEKLDFECKDTLTIGVVGMPGIGKTTLTSM 255

Query: 202 IYSNISSHFEGSYFMQNIR--------------DESEKVGGLANIHLNFERRRLSRM--- 244
           +Y      F    F+ ++R              +E  K   +     +F    L  +   
Sbjct: 256 LYEKWQHDFLRCVFLHDVRKMWKDCMMDRSIFIEELLKDDNVNQEVADFSPESLKALLLS 315

Query: 245 -KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            K L+V  +++D KQI++L+G  D    GSR+ ITT D  +++      V   +EV  L+
Sbjct: 316 KKSLVVLDNVSDKKQIEVLLGESDWIKRGSRIFITTSDRSVIEGM----VDDTYEVLRLT 371

Query: 304 YNDSLTLFSRNAFGQN--HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
             DS   FS  AF      P   F+ LS +   YA G PLAL++LG  L G  +  WE  
Sbjct: 372 GRDSFEYFSYFAFSGKLCPPVRTFMNLSRLFADYAKGNPLALKILGKELNGKDKTHWEEK 431

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
           ++KL + P+  IQ VL+VSYD L    +++FLD ACFF+  D+Y V   +++C   A   
Sbjct: 432 LSKLMQSPNKTIQDVLRVSYDELGLSHKDVFLDVACFFRSGDEYYVRCLVESCDTEAIDT 491

Query: 422 ISR---LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE 478
           +S    L  K L+ IS  ++ MHDLL   G E+  Q S        RLW+ + +   L  
Sbjct: 492 VSEIKDLASKFLINISGGRVEMHDLLYTFGKELGSQGS-------RRLWNHKAVVGALKN 544

Query: 479 NTSLPTGINLDS---LKELYLGGCSNLK-------RFPEISCNIE-------------DL 515
                 GI LD     K+L L   + +K       +F    C+ E             + 
Sbjct: 545 RVGAVRGIFLDMSELKKKLPLDRSTFIKMRNLRYLKFYSSRCDRECEADSKLNFPEGLEF 604

Query: 516 DLKET--------AIEELPSSIGNLSRLVDLDL------------TNCSGLKSV----SS 551
            L E          + +LP    N   L D +L             +   LK V    S 
Sbjct: 605 PLDEIRYLYWLKFPLMKLPKDF-NPKNLTDFNLPYSEIEELWEGAKDTQKLKWVDLSHSR 663

Query: 552 RLCNL------KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL----------------- 588
           +LCNL      +SL+RLNL GC  LE+LP E+  ++SL +LN+                 
Sbjct: 664 KLCNLSGLLNAESLQRLNLEGCTSLEELPREMKRMKSLIFLNMRGCTSLRVLPRMNLISL 723

Query: 589 ---------AEKDFE-----------------KIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                    + + F+                 K+P+ M +L KL  L L++CK L ++PE
Sbjct: 724 KTLILTNCSSIQKFQVISDNLETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKMLGAVPE 783

Query: 623 ----LPCGSSIHARHCTSLKTLS 641
               L     +    C+ LKT S
Sbjct: 784 FLGKLKALQELVLSGCSKLKTFS 806



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 102/221 (46%), Gaps = 42/221 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +NL SLK L L  CS++++F  IS N+E L L  TAI +LP+ +  L +L+ L+L +C  
Sbjct: 718 MNLISLKTLILTNCSSIQKFQVISDNLETLHLDGTAIGKLPTDMVKLQKLIVLNLKDCKM 777

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK---- 601
           L +V   L  LK+L+ L LSGC KL+     I  ++ L+ L L     +++P  ++    
Sbjct: 778 LGAVPEFLGKLKALQELVLSGCSKLKTFSVPIETMKCLQILLLDGTALKEMPKLLRFNSS 837

Query: 602 -------------------------------------QLSKLSDLRLQNCKRLQSLPELP 624
                                                QL  L  L L+ CK L S+P LP
Sbjct: 838 RVEDLPELRRGINGLSSLRRLCLSRNNMISNLQIDINQLYHLKWLDLKYCKNLTSIPLLP 897

Query: 625 CGSSIHARH-CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
               I   H C  LKT+++   LL    +    F F+NC+N
Sbjct: 898 PNLEILDAHGCEKLKTVASPMALLKLMEQVQSKFIFTNCNN 938


>gi|4588052|gb|AAD25967.1|AF093640_1 flax rust resistance protein [Linum usitatissimum]
 gi|4588058|gb|AAD25970.1|AF093643_1 flax rust resistance protein [Linum usitatissimum]
          Length = 1301

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 176/533 (33%), Positives = 277/533 (51%), Gaps = 70/533 (13%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++     P  ++DVFLSFRG D R  F   L   LC  KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGSFPSVEYDVFLSFRGPDTRKQFTDFLYHFLCYYKIHTFRDDDELRKGKEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAGY 118
           P+L  AI+ SKI + I S GYA S+WCL EL +I+  + +   +I++P+FY+VDPSD  +
Sbjct: 106 PNLLRAIDQSKIYVPIISSGYADSKWCLMELAEIVRRQEEDPRRIILPIFYMVDPSDVRH 165

Query: 119 ---CPSLGW---MGIFDIPTSESVLIEGNVNDISKKLSDL----FPSDNK---------- 158
              C    +      FD  T +      N  D  KK+ DL       D++          
Sbjct: 166 QTGCYKKAFRKHANKFDGQTIQ------NWKDALKKVGDLKGWHIGKDDEQGAITDEVLA 219

Query: 159 ---------------DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIY 203
                          D+LVG++  I  +  +L   S     VG++G+GGIGKTT A A+Y
Sbjct: 220 DIWSHISKENLILETDELVGIDDHITAVLEKLSLDSENVTMVGLYGMGGIGKTTTAKAVY 279

Query: 204 SNISSHFEGSYFMQNIRDESEKVGGLANIH--------------LNFE---------RRR 240
           + ISS F+   F+ NIR+  ++  G+  +               + F          + R
Sbjct: 280 NKISSCFDRCCFIDNIRETQDQKDGVVVLQKKLVSEILRIDSGSVGFNNDSGGRKMIKER 339

Query: 241 LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVK 300
           +SR K+L+V  D+ +  + + ++G    F+  SR IIT+R +++L     ++   ++EV 
Sbjct: 340 VSRFKILVVLDDVDEKFKFEDMLGSPKDFISQSRFIITSRSMRVLGTLNENQC-KLYEVG 398

Query: 301 ELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWES 360
            +S   SL LFS++AF +N P + +  L+N V+    G+PL L+V+GS L       W+ 
Sbjct: 399 SMSKPHSLELFSKHAFKKNTPPSDYETLANDVVDTTAGLPLTLKVIGSILFKQEIGVWKD 458

Query: 361 AVNKLKRMPHM-DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAK 419
            + +L++  ++ ++   LK+SYD L  E + IFLD ACFF G ++ +       C F   
Sbjct: 459 TLQQLRKTLNLNEVYDRLKISYDALKPEAKEIFLDIACFFIGKNKEVPYYMWTDCNFYPA 518

Query: 420 IGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
             I  L+ + ++ +  ++K  MHD L++MG EIVR+E I+ P KRSR+W  E+
Sbjct: 519 SNIIFLIQRCMIQVGDDDKFKMHDQLRDMGREIVRREDIR-PWKRSRIWSREE 570



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 37/164 (22%)

Query: 490  SLKELYLGGCSNLKRFPEISC-----NIEDLDLKETAI--EELPSSIGNLSRLVDLDLT- 541
            SL EL +  C  L+  P I        ++ LDL    I  EE   +IG+L  LV L+L  
Sbjct: 998  SLVELTIRDCPRLEVGPMIRSLPKFPMLKKLDLAVANITKEEDLDAIGSLEELVSLELKL 1057

Query: 542  --NCSGLKSVSS---------------------RLCNLKSLRRLNLSGCLKLEKLPEEIG 578
                SG++ + S                      L  LKSL+RL L GC  L +LP    
Sbjct: 1058 DDTSSGIERIVSLSKLQKLTTLKVEVPSLREIEELAELKSLQRLILEGCTSLGRLP---- 1113

Query: 579  NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             LE L+ L++    D  ++  ++  +  L +L +++C RL+  P
Sbjct: 1114 -LEKLKELDIGGCPDLAELVQTVVAVPSLVELTIRDCPRLEVGP 1156



 Score = 40.8 bits (94), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 14/187 (7%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
            L SL+ L L GC++L R P     +++LD+     + EL  ++  +  LV+L + +C  L
Sbjct: 1095 LKSLQRLILEGCTSLGRLP--LEKLKELDIGGCPDLAELVQTVVAVPSLVELTIRDCPRL 1152

Query: 547  K--SVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKD----FEKIPSS 599
            +   +   L     L +L LS   +  E   E +G+LE L  L L   D     E+I S 
Sbjct: 1153 EVGPMIQSLSKFPMLNKLTLSMVNITKEDELEVLGSLEKLVSLKLKLDDTSSGIERI-SF 1211

Query: 600  MKQLSKLSDL--RLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIF 657
            + +L KL+ L   + + + ++ L EL     ++ + CTSL+ L      L  S K+    
Sbjct: 1212 LSKLQKLTTLIVEVPSLREIEGLAELKSLYDLYLQGCTSLERLWPDQQQLG-SLKNLKAL 1270

Query: 658  NFSNCSN 664
            N   C +
Sbjct: 1271 NIRGCKS 1277


>gi|15223551|ref|NP_176044.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12323030|gb|AAG51507.1|AC058785_10 disease resistance protein, putative [Arabidopsis thaliana]
 gi|332195281|gb|AEE33402.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 897

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 230/737 (31%), Positives = 370/737 (50%), Gaps = 109/737 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS     + +++VF SF G DVR  F+SHL        I  F D+ + R   I+P
Sbjct: 1   MASSSSSPR---NWRYNVFTSFHGPDVRIKFLSHLRQQFIYNGITMFDDNGIERSQIIAP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L  AI  S+I+I++ S+ YASS W L+EL++IL+ K   GQIV+ VFY VDPSD     
Sbjct: 58  ALKKAIGESRIAILLLSKNYASSSWSLDELLEILKCKEDIGQIVMTVFYEVDPSDVRNQT 117

Query: 117 --------------------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSD 151
                                +  +L ++G      F    +E+ +IE    D+S  L +
Sbjct: 118 GDFGIAFKETCAHKTEEERQKWTQALTYVGNIAGEDFKHWPNEAKMIEKIARDVSDIL-N 176

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           + P  + D +VG+   ++E+ES L   +     VGI G  GIGK+TIA+A++  +S+ F+
Sbjct: 177 VTPCRDFDGMVGLNDHLREMESLLDLKNDGVKIVGISGPAGIGKSTIATALHGRLSNMFQ 236

Query: 212 GSYFMQNIRDESEKVG-------------GLANI---------HLNFERRRLSRMKVLIV 249
            + F+ N+R ES K+G              LA +         HL+  + RL  ++VLI+
Sbjct: 237 RTCFVDNLR-ESYKIGLDEYRLKLHLQQQLLAYVLNQDKIRVGHLSVMKERLDDLRVLII 295

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+  L Q++ L   +  F PGSRVI+TT + ++L  H    +  ++ V   S  ++L 
Sbjct: 296 LDDVEHLYQLEAL-ADIRWFGPGSRVIVTTENREILLQHG---IKDIYHVGFPSEGEALM 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +F  +AF Q  P  GFL+L+  V      +PL L VLG+ L G S+ +W   + +LK   
Sbjct: 352 IFCLSAFRQPSPPYGFLKLTYEVASICGNLPLGLHVLGTLLWGKSQADWIEELPRLKDCL 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGK 428
              I+ VLKV Y+ L +++Q +FL  A +F  +    V + L+       ++G+ +L  +
Sbjct: 412 DGRIESVLKVGYESLYEKDQALFLLIAVYFNYDYVDYVTSMLENTNVLDVRLGLKKLANR 471

Query: 429 SLVTIS-----NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE----N 479
            L+ I       +++ M+ LLQ M  E++ ++ I    KR  L  P+DI  VL E     
Sbjct: 472 CLIQIDIDHNRKSRVVMNRLLQVMAREVISKQKI---SKRKILEDPQDICYVLEEAKGKG 528

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNI-----------EDLDLKETAIEELPSS 528
           ++L   +++  +KEL +    N K F ++ CN+            D  L      ELPSS
Sbjct: 529 SALGLSLDVAEIKELVI----NKKAFKKM-CNLLILKVFNGTDPRDSKLHVPEEMELPSS 583

Query: 529 IGNL--------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           I  L                LV L++   S L+ +      L +L+ +NL G   L++LP
Sbjct: 584 IRLLHWEAYPRKSFRFGPENLVTLNMEY-SELEKLWKGTQPLANLKEMNLCGSSCLKELP 642

Query: 575 EEIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IH 630
            ++    +LE L++AE +   +IPSS+  L K+ +L +++C+ L+ +P L   +S   I+
Sbjct: 643 -DLSKAANLERLDVAECNALVEIPSSVANLHKIVNLHMESCESLEVIPTLINLASLKIIN 701

Query: 631 ARHCTSLKTLSNSSTLL 647
              C  LK+  +  T L
Sbjct: 702 IHDCPRLKSFPDVPTSL 718



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 33/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SLK + +  C  LK FP++  ++E+L +++T ++ELP+S  + + +  L + 
Sbjct: 688 IPTLINLASLKIINIHDCPRLKSFPDVPTSLEELVIEKTGVQELPASFRHCTGVTTLYIC 747

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +   LK+ S+ L     LR+L+LS C                          E +  S+K
Sbjct: 748 SNRNLKTFSTHL--PMGLRKLDLSNC------------------------GIEWVTDSIK 781

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            L  L  L+L  CKRL SLPELPC    + A  CTSL+ +S+S  +          FNF 
Sbjct: 782 DLHNLYYLKLSGCKRLVSLPELPCSLECLFAEDCTSLERVSDSLNIPNAQ------FNFI 835

Query: 661 NC 662
            C
Sbjct: 836 KC 837


>gi|297802316|ref|XP_002869042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314878|gb|EFH45301.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1178

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 232/820 (28%), Positives = 365/820 (44%), Gaps = 195/820 (23%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           +AS++ S+ +   P+H VF++FRGK +R  FVSHL  AL R+ I  FID+   RGN++S 
Sbjct: 2   LASATFSVEL--PPQHQVFMNFRGKQLRKGFVSHLEKALKRDGINAFIDEDETRGNDLS- 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L S I+ S+I++ IFS  Y  S WCL+ELVKI E  +    +V+P+FY V+  D     
Sbjct: 59  ILFSRIDESRIALAIFSSMYTESNWCLDELVKIKECVDLGKLVVIPIFYKVETDDVKNLK 118

Query: 121 SL------------------GWMGIFDIPT-----------SESVLIEGNVNDISKKLSD 151
            +                   W     + T           +E   +E  V  + + LS+
Sbjct: 119 GVFGDKFWELVKTCNGEKLDKWKEALKVVTNKMGFTLGEMSNEGEYVEKIVRQVIEVLSN 178

Query: 152 L-------FPSDNKD---------------QLVGVESIIKEIESQLLSGSTEFNTVGIWG 189
           +        P D+                  L G+ + ++++E +L         +G+ G
Sbjct: 179 VSTDLKREVPIDDPSAGEGETPEAAPDSLPHLFGINTRLQQLEEKLDFECKSTLIIGVVG 238

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--------------------GL 229
           + GIGKTT+ S +Y N    F    F+ ++   S++                       +
Sbjct: 239 MPGIGKTTLTSMLYENWQGGFLSRAFLHDVSQMSKRYTKRQMRNILMTELLKEVDLKQKV 298

Query: 230 ANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
           A++     +  L  MK LIV  +++D KQI  L+   D    GSR+I TT D+ +++   
Sbjct: 299 ADMSPKSLKAHLLSMKSLIVLDNVSDKKQIKDLLEEDDWIKIGSRIIFTTSDISVIEGM- 357

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQN--HPAAGFLELSNIVIKYANGVPLALQVLG 347
              V   +EV+ L+  DS   FS  AF      P   F+ LS + + YA G PL L++LG
Sbjct: 358 ---VDDTYEVQRLTGRDSFDYFSHFAFNFKLPTPEGNFINLSRLFVDYAKGNPLVLKILG 414

Query: 348 SYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLV 407
             L G  E+ W   + +L   P   +Q VL++SYDGL   ++++FLD ACFF+  D Y V
Sbjct: 415 VELSGKKEKYWTDKLRELAESPIKKLQDVLRISYDGLGQLQKDVFLDVACFFRSGDDYYV 474

Query: 408 MNFLDACRFSAKIGISR---LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRS 464
              +++C      G+S    L  K L+ IS  ++ MHDLL   G E+  Q      G R 
Sbjct: 475 RCLVESCDTEPIDGVSEIKDLASKFLINISGGRMEMHDLLYTFGKELGSQSQ----GLR- 529

Query: 465 RLWHPEDIYQVLNENTSLPT--GINLDSL---KELYLGGCS-----NLK--RFPEISC-- 510
           RLW+   I   L +     +  GI LD     KEL L  C+     NL+  +F    C  
Sbjct: 530 RLWNHILIVGALKKRAGADSVRGIFLDMFELKKELPLEKCTFTEMRNLRYLKFYSSRCHQ 589

Query: 511 -----------------------------------------NIEDLDLKETAIEELPSSI 529
                                                    N+ DL+L  + IEE+   +
Sbjct: 590 EGEADCKINFPEGVEFSLDEVRYLYWLKFPLEKLPKDFNPKNLTDLNLPYSEIEEVWEGL 649

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL- 588
            +  +L  +DL++ S L +++  L N KSL+RLNL GC  LE+LP E+ +LE+L +LN+ 
Sbjct: 650 KDTPKLKWVDLSHSSKLCNLTG-LLNAKSLQRLNLEGCTSLEELPSEMKSLENLVFLNMR 708

Query: 589 -------------------------AEKDFE-----------------KIPSSMKQLSKL 606
                                    + ++F+                 ++P +M +L +L
Sbjct: 709 GCTSLRVLPHMNLISMKTLILTNCSSLEEFQVISDNIETLYLDGTAIVQLPPNMVKLQRL 768

Query: 607 SDLRLQNCKRLQSLPELPCGSSIHARH------CTSLKTL 640
             L L++CK L+++P+  C   + A        C++LKT 
Sbjct: 769 IVLNLKDCKMLRAVPQ--CLGRLKALQELVLSGCSTLKTF 806



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 103/220 (46%), Gaps = 42/220 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +NL S+K L L  CS+L+ F  IS NIE L L  TAI +LP ++  L RL+ L+L +C  
Sbjct: 719 MNLISMKTLILTNCSSLEEFQVISDNIETLYLDGTAIVQLPPNMVKLQRLIVLNLKDCKM 778

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK-QLS 604
           L++V   L  LK+L+ L LSGC  L+  P  I N++ L+ L L   + ++IP  ++   S
Sbjct: 779 LRAVPQCLGRLKALQELVLSGCSTLKTFPVPIENMKCLQILLLDGTEIKEIPKILQYNSS 838

Query: 605 KLSDLR----------------------------------------LQNCKRLQSLPELP 624
           K+ DLR                                        L+ CK L S+  LP
Sbjct: 839 KVEDLRELRRGVKGLSSLRRLCLSRNGMISNLQIDISQLYHLKWLDLKYCKNLTSISLLP 898

Query: 625 CGSSIHARH-CTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
               I   H C  LKT+++   L     +    F F+NC+
Sbjct: 899 PNLEILDAHGCEKLKTVASPMALPKLMEQVRSKFIFTNCN 938


>gi|357474811|ref|XP_003607691.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355508746|gb|AES89888.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1050

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 221/711 (31%), Positives = 342/711 (48%), Gaps = 110/711 (15%)

Query: 8   INMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAI 66
           + ++   K+DVF+SF G D R+ F  HL  AL R+ I  F D++ LN G  I P+L  AI
Sbjct: 1   MTLLERKKYDVFVSFCGDDTRNKFTDHLFGALRRKNIAAFRDNRHLNSGASIEPALFRAI 60

Query: 67  EGSKISIVIFSEGYASSRWCLNELVKIL-ESKNKYGQIVVPVFYLVDPSD---------- 115
           E S+I IV+ S+ YASS WCL ELV IL        + V  VFY V+PS+          
Sbjct: 61  EVSQIFIVVLSKSYASSTWCLRELVYILLHCSQPSEKRVRTVFYDVNPSEVRKQSGSYAK 120

Query: 116 --AGYCPSLGWMGIFDIPTSESVLIEGNVN--------------DISKKLSDLF------ 153
             A +  + G   +      E++   GN++               I K++ + F      
Sbjct: 121 AFAKHEENFGQDHVKVRQWREALTQAGNISGCDLGNKPENEEIETIVKEIVETFGYKFSY 180

Query: 154 -PSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNI--SSH 209
            P+D    LVG+   I+E+E  LL  S +    VGI G+ G+GKTT+AS +Y N   S  
Sbjct: 181 LPND----LVGMLPPIEELEKCLLLDSVDKVLAVGICGMSGVGKTTLASVLYCNKKNSPQ 236

Query: 210 FEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKVLIV 249
           F+   F+ ++  +    G             G  +I +       N  + RLSR + LI+
Sbjct: 237 FDACCFIDDVSKKFRYYGPVGAQKQILHQTLGEEHIQIYNMYDAANLIQSRLSRCRALII 296

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
           F ++ D +Q++ L         GSR+II  RD  +L+ +    V  +++V  L+  +SL 
Sbjct: 297 FDNVDDSEQLEKLAVTRKSLAAGSRIIIVCRDAHILEEYG---VDALYKVPFLNETNSLQ 353

Query: 310 LFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
           LF R AF   N  +  + E++  ++ YANG+PL ++VL S+L   S  EW SA+ +L   
Sbjct: 354 LFCRKAFKCDNIKSDSYEEMTYDMLNYANGLPLVIKVLSSFLYNRSISEWRSALARLGES 413

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
           P+ +I   L+  + GL+  E  IFLD ACFF G ++  V N L+ C F   IG+  LV K
Sbjct: 414 PNKNIMDALQFGFYGLEKTEFEIFLDIACFFNGREEKFVKNVLNCCGFHPDIGLRVLVDK 473

Query: 429 SLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT-----SL 482
           SL+ IS+ NKI MH + +E+G  IV++ S K   + S LW  +  Y V++EN      ++
Sbjct: 474 SLIRISDENKIEMHGVFEELGRRIVQENSTKVARQWSILWLHKYCYDVMSENMEKNVEAI 533

Query: 483 PTGINLDSLKELYLGGCSNLKR-----FPEISC--------------------------- 510
               N    +EL +   SN+ R       ++ C                           
Sbjct: 534 VLNGNERDTEELMVEALSNMSRLRLLILKDVKCLGRLDNLSNQLRYVAWNGYPFMYLPSN 593

Query: 511 ----NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG 566
                + +L + +++I++L     NL  L  LDL+  + L  +      + +L RLNL G
Sbjct: 594 FRPNQLVELIMVDSSIKQLWEGKKNLPNLRTLDLSYSTNLIKMLD-FGEVPNLERLNLEG 652

Query: 567 CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKR 616
           C+KL ++   I   + L +LNL   +    IP+ +  L+ L  L L  C +
Sbjct: 653 CVKLVEMDLFICLPKKLVFLNLKNCRSLISIPNGISGLNSLEYLNLCGCSK 703



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 92/207 (44%), Gaps = 35/207 (16%)

Query: 487 NLDSLKELYLGGCSNLKR---FPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTN 542
           NL +L+ L L   +NL +   F E+  N+E L+L+    + E+   I    +LV L+L N
Sbjct: 618 NLPNLRTLDLSYSTNLIKMLDFGEVP-NLERLNLEGCVKLVEMDLFICLPKKLVFLNLKN 676

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLK----------------------------LEKLP 574
           C  L S+ + +  L SL  LNL GC K                            L  LP
Sbjct: 677 CRSLISIPNGISGLNSLEYLNLCGCSKALNNLRHLEWPSLASLCCLREVDISFCNLSHLP 736

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARH 633
            +I +L  +E  NL    F  +P     LSKL  L L++C  L SLPELP  ++I H  +
Sbjct: 737 GDIEDLSCVERFNLGGNKFVTLPG-FTLLSKLEYLNLEHCLMLTSLPELPSPAAIKHDEY 795

Query: 634 CTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            ++   + N S L    +K      FS
Sbjct: 796 WSAGMYIFNCSELDENETKRCSRLTFS 822


>gi|145326644|ref|NP_001077769.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324936|gb|AAG52415.1|AC011622_3 putative disease resistance protein; 17840-13447 [Arabidopsis
           thaliana]
 gi|332196021|gb|AEE34142.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1131

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 232/752 (30%), Positives = 360/752 (47%), Gaps = 133/752 (17%)

Query: 1   MASSSSSINMIPHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEIS 59
           MAS SSS    PH  K  VF SF G DVR   +S+L      + I  F D+K+ RG ++S
Sbjct: 5   MASPSSSK---PHNYKFKVFSSFHGPDVRKTLLSNLREHFQGKGITMFDDEKIKRGGDLS 61

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC 119
           PSL  AI+ SKISIVI S+ YASS WCL+EL++I++ K    QIV+ VFY V+PSD    
Sbjct: 62  PSLKRAIKTSKISIVILSQKYASSSWCLDELLEIMKRKKAMKQIVMTVFYGVEPSDVR-- 119

Query: 120 PSLGWMGI-------------------------------FDIPTSESVLIEGNVNDISKK 148
              G  GI                               F    +E+ +I+    D+S K
Sbjct: 120 KQTGDFGIAFNKTCVNKTDKERKEWSKALTDVSNIAGEDFKKWDNEANMIKKIARDVSYK 179

Query: 149 LSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
           L +  PS + + ++G+E+ +K+I+S L L    E   +GI G  GIGK+TIA A+ S +S
Sbjct: 180 L-NATPSKDFEDMMGLEAHLKKIQSLLRLDYKDEALIIGISGPAGIGKSTIARALESRLS 238

Query: 208 SHFEGSYFMQNIRDESEKVG----------------------GLANIHLNFERRRLSRMK 245
             F+ + FM ++R  SE  G                      G    HL   ++RLS ++
Sbjct: 239 DRFQLTCFM-DLRG-SENNGLHDYGQQLRLQEQLLAKVLNQDGTRICHLGVLQQRLSDLR 296

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           VLI+  D++D+KQ+  L      F PGSR+I+TT +  LL+  RG  +   + V   S  
Sbjct: 297 VLIILDDVSDIKQLKALAKETTWFGPGSRIIVTTENKDLLQ-QRG--IDSTYHVGFPSRE 353

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           ++L +F + AF Q+ P   F +L+  +      +PL L V+GS L G  ++EWE  V++L
Sbjct: 354 EALEIFCKFAFEQSSPPHAFEKLAARITHLCGNLPLGLCVMGSSLFGKKQDEWEFVVHRL 413

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISR 424
           +  P  +I  VL+V Y+ L + +Q +FL  A FF   D+ LV   L D         +  
Sbjct: 414 ETNPGQEIDDVLRVGYERLHENDQMLFLHIAIFFNYRDRDLVEAMLADDGNLDVGNWLKF 473

Query: 425 LVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTS 481
           L+ KSL+ I    +I MH LLQ++G + +R++   +P KR  L +  +I  +L   + TS
Sbjct: 474 LINKSLIEIYRTGQIVMHKLLQQVGRQAIRRQ---EPWKRQILINANEICDLLRYEKGTS 530

Query: 482 L-PTGINLDS------------------LKELYL----GGCSNLKRFPE----------- 507
              +GI+ D+                  L+ L++       +N    PE           
Sbjct: 531 CNVSGISFDTSGISEVTICDGAFKRLHDLRFLHVYKSRDDGNNRVHIPEKVEFPPRLRLL 590

Query: 508 ---------------ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
                          + C +E L+++E+ +E+L     +L  L  +DLT    LK +   
Sbjct: 591 HWAAYPSKSLPPTFNLECLVE-LNMRESLVEKLWEGTQHLKNLKYMDLTESKNLKELPD- 648

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRL 611
           L N  +L    L  C  L ++P    +L  LE+L +    + + IP+ M  L+ +  + +
Sbjct: 649 LSNATNLEYFYLDNCESLVEIPSSFAHLHKLEWLEMNNCINLQVIPAHM-NLTSVKQVNM 707

Query: 612 QNCKRLQSLPELPCGSSIHARHCTSLKTLSNS 643
           + C RL+  P       + +RH  +L    N+
Sbjct: 708 KGCSRLRKFP-------VISRHIEALDISDNT 732



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 35/183 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDL 540
           +P  +NL S+K++ + GCS L++FP IS +IE LD+ + T +E++P+SI +   LV LD+
Sbjct: 693 IPAHMNLTSVKQVNMKGCSRLRKFPVISRHIEALDISDNTELEDMPASIASWCHLVYLDM 752

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           ++   L+                      L +LP       SL +LNL+  D E IP  +
Sbjct: 753 SHNEKLQG---------------------LTQLPT------SLRHLNLSYTDIESIPDCI 785

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
           K L +L +L L  C RL SLP+LPC   ++ A  C SL+++  SS L T S++     +F
Sbjct: 786 KALHQLEELCLSGCTRLASLPDLPCSIKALEAEDCESLESV--SSPLYTPSAR----LSF 839

Query: 660 SNC 662
           +NC
Sbjct: 840 TNC 842


>gi|105922631|gb|ABF81427.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
          Length = 1336

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 218/676 (32%), Positives = 326/676 (48%), Gaps = 134/676 (19%)

Query: 22  FRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGY 80
           FRGKD R+NF SHL + L +  I+ ++DD+ L RG  I P+L  AIE S+ S++IFS  Y
Sbjct: 1   FRGKDTRNNFTSHLYSNLKQRGIDVYMDDRELERGKTIEPALWKAIEESRFSVIIFSRDY 60

Query: 81  ASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY---------------------- 118
           ASS WCL+ELVKI++   + G  V+PVFY VDPS+                         
Sbjct: 61  ASSPWCLDELVKIVQCMKETGHTVLPVFYDVDPSEVAEQKGQYEKAFVEHEQNFKENLEK 120

Query: 119 ------CPSL-----GWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESI 167
                 C S      GW  + +   SES+ I   V  IS KLS   P+ +K +LVG++S 
Sbjct: 121 VQIWKDCLSTVTNLSGW-DVRNRNESESIKI--IVEYISYKLSVTLPTISK-KLVGIDSR 176

Query: 168 IKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG 227
           +K +   +     +   +GI G+GGIGKTT+A  +Y  I   FEGSYF+ N+R+   + G
Sbjct: 177 VKVLNGYIGEEVGKAIFIGICGMGGIGKTTVARVLYDKIRWQFEGSYFLANVREVFAEKG 236

Query: 228 GLANIHLNFERRRLSRMKVLIVFY--------------------DLTDLKQIDLLIGRLD 267
           G   +        L     L   Y                    D+ D KQ++ L     
Sbjct: 237 GPRRLQEQLLSEILMECASLKDSYRGIEMIKRRLRLKKILLILDDVDDKKQLEFLAAEPG 296

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            F PGSR+IIT+RD  +   +  +++   +E ++L+ +D+L LF++ AF  + P   F++
Sbjct: 297 WFGPGSRIIITSRDTNVFTGNDDTKI---YEAEKLNDDDALMLFNQKAFKNDQPTEDFVK 353

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LS  V+ YANG+PLAL+V+                                         
Sbjct: 354 LSKQVVGYANGLPLALEVI----------------------------------------- 372

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
                 D ACF KG ++  ++  LD+C F A IG   L+ +SL+++  +++ MHDLLQ M
Sbjct: 373 ------DIACFLKGFEKDRIIRILDSCGFHAHIGTQVLIERSLISVYRDQVWMHDLLQIM 426

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----PTGINLDSLKELY--LGGCSN 501
           G EIVR ES ++PG+RSRLW  ED+   L +NT         +++  +KE    +   S 
Sbjct: 427 GKEIVRSESSEEPGRRSRLWTFEDVRLALMDNTGKEKIEAIFLDMPEIKEAQWNMEAFSK 486

Query: 502 LKRFP-------EISCNIEDLDLKETAIE-------ELPSSIGNLSRLVDLDLTNCSGLK 547
           + R         ++S   EDL  K   +E        LP+ +  +  LV+L + N S ++
Sbjct: 487 MSRLRLLKIDNVQLSEGPEDLSNKLRFLEWHSYPSKSLPAGL-QVDELVELHMAN-SSIE 544

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLAEKDFEKIPSSMKQLSK 605
            +     +  +L+ +NLS  L L K P+  G  NLESL           K+  S+    K
Sbjct: 545 QLWYGCKSAVNLKIINLSNSLNLSKTPDLTGIPNLESLILEGCT--SLSKVHPSLAHHKK 602

Query: 606 LSDLRLQNCKRLQSLP 621
           L  + L NCK ++ LP
Sbjct: 603 LQYMNLVNCKSIRILP 618



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 97/170 (57%), Gaps = 9/170 (5%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           S+P+ I  L SLK+L L GCS LK   ++  + E+ D   T+I + P+ I  L  L  L 
Sbjct: 686 SIPSSIGCLKSLKKLDLSGCSELKNLEKVESS-EEFDASGTSIRQPPAPIFLLKNLKVLS 744

Query: 540 LTNCSGLK-SVSSR----LCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDF 593
              C  +  S++ +    L  L SL  L+L  C L+   LPE+IG L SL+ L+L+  +F
Sbjct: 745 FDGCKRIAVSLTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSRNNF 804

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
             +P S+ QLS L  L L++C+ L+SLPE+P    +++   CTSLK + +
Sbjct: 805 VSLPRSVNQLSGLEMLVLEDCRMLESLPEVPSKVQTVNLNGCTSLKEIPD 854



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 15   KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
            K +VF   R  D  ++F S+L + L    I + ++ +  +   I   L  AIE S +SI+
Sbjct: 1062 KANVFPVIRVADTSNSF-SYLQSDLALRFIMS-VEKEPEKIMAIRSRLFEAIEESGLSII 1119

Query: 75   IFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
            IF+    S  WC  ELVKI+   ++     V PV Y V+ S
Sbjct: 1120 IFARDCVSLPWCFEELVKIVGFMDEMRSDTVFPVSYDVEQS 1160


>gi|51477386|gb|AAU04759.1| MRGH11 [Cucumis melo]
          Length = 1001

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 222/738 (30%), Positives = 343/738 (46%), Gaps = 129/738 (17%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKI 71
           P   +DVF+SFRG+DVRH F  +L  AL R  I+ F+D+K     +    L   I+ S+ 
Sbjct: 12  PKMNYDVFISFRGRDVRHTFAGYLYDALNRLGIKAFLDNKRFLIGDDLHDLFKIIDESRS 71

Query: 72  SIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-------------DAGY 118
           +IV+ SE YAS++WCL EL KI++S     + V+PVFY +DPS             D   
Sbjct: 72  AIVVLSEDYASAKWCLRELTKIMDSMGTSMERVLPVFYHIDPSIVKDQSGTFKTSFDEHE 131

Query: 119 CPSL----------------GWM-GIFDIPTSESVLIEGN------VNDISKKLSDLFPS 155
             +L                 W   +  I     V+I  N      VN I+ ++ D +  
Sbjct: 132 ANALKEIDNQEKEKRLKELQNWKNALKKIGNHTGVVITKNSSEVDIVNKIASQIFDAWRP 191

Query: 156 D----NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
                NK+ LVG+ S +  +   L  G  +   V I G+GGIGKTTIA  ++  I S F+
Sbjct: 192 KLEALNKN-LVGMTSRLLHMNMHLGLGLDDVRFVAIVGMGGIGKTTIAQVVFDCILSKFD 250

Query: 212 GSYFM--------------------QNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFY 251
              F+                    Q    E  K+    N  +   + RLS  KVLIV  
Sbjct: 251 DCCFLTLPGGDSKQSLVSLQREMLSQIFHKEDFKIWH-ENHGVEMIKNRLSGRKVLIVLD 309

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
              + +Q+++L G  + F PGSR+IITTR+  LL  H        + V+EL ++ +L LF
Sbjct: 310 GAEERRQLEMLAGSTEWFGPGSRIIITTRNKGLL-CHPNYDEMKEYNVEELDHDSALQLF 368

Query: 312 SRNAFGQNHP-AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
            ++AFG NH     F++LSN +++ A  +PLAL+V+GS L G     W   + +L ++  
Sbjct: 369 LKHAFGSNHQNKDSFMDLSNEIVEKAKRLPLALRVIGSSLYGKEITIWRETLKRLIKVDE 428

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
            +   +LK+SYDGL  E Q +FLD  CFF G ++  V   L++  +S    +  L+ + L
Sbjct: 429 RNFFDILKISYDGLGVESQQVFLDITCFFNGKNEDRVNEILESFGYSPNSELQLLMQRCL 488

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP--TGINL 488
           + +S+ KI +HDL+ EMG EIVR+ES+  P K+SR+W  ED+Y    E   L    GI L
Sbjct: 489 IEVSHKKILVHDLILEMGREIVRKESLTQPEKQSRIWLHEDLYCRFAEKHDLMHIQGIVL 548

Query: 489 DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD----------- 537
              KE+      + + F E++  +  L++    ++E    +  L R+++           
Sbjct: 549 SLEKEMEESIELDAESFSEMT-KLRILEINNVELDEDIEYLSPLLRIINWLGYPSKSLPP 607

Query: 538 --------------------------------LDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
                                           +D++N   L+ V+     + +L RL L 
Sbjct: 608 TFQSRYLFELLLPHSQLLRVWDGKRRFPKLKLIDVSNSEHLR-VTPDFSGVPNLERLVLC 666

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            C++L ++   I +L  L  L+L    D +  P++++            CK LQ+L    
Sbjct: 667 NCVRLCEIHPSINSLNKLILLDLEGCGDLKHFPANIR------------CKNLQTLKLSG 714

Query: 625 CGSSI-----HARHCTSL 637
            G  I     H  H T L
Sbjct: 715 TGLEIFPEIGHMEHLTHL 732



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 11/156 (7%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            P  I   +L+ L L G + L+ FPEI    ++  L L  + I  L  SIG L+ LV LD
Sbjct: 698 FPANIRCKNLQTLKLSG-TGLEIFPEIGHMEHLTHLHLDGSKITHLHPSIGYLTGLVFLD 756

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L+ C GL S+   + NLKSL+ L L  C +L+K+P  + N ESLE L+++E     +PSS
Sbjct: 757 LSTCLGLSSLPFEIGNLKSLKTLLLKYCKRLDKIPPSLANAESLETLSISETSITHVPSS 816

Query: 600 MKQLSKLSDLRLQNCKRLQS------LPELPCGSSI 629
           +  +  L +L   +C+ L        LP+L    +I
Sbjct: 817 I--IHCLKNLETLDCEELSRGIWKSLLPQLNINQTI 850



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 18/142 (12%)

Query: 499 CSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL-----KSVS 550
           C  L + P    N   +E L + ET+I  +PSSI  +  L +L+  +C  L     KS+ 
Sbjct: 784 CKRLDKIPPSLANAESLETLSISETSITHVPSSI--IHCLKNLETLDCEELSRGIWKSLL 841

Query: 551 SRL-------CNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
            +L         L  L+ LNL GC L  E +PE++    SLE L+L+  +F  +P S+  
Sbjct: 842 PQLNINQTITTGLGCLKALNLMGCKLMDEDIPEDLHCFSSLETLDLSYNNFTTLPDSLSH 901

Query: 603 LSKLSDLRLQNCKRLQSLPELP 624
           L KL  L L  C  L+ LP+LP
Sbjct: 902 LKKLKTLILNYCTELKDLPKLP 923


>gi|15222527|ref|NP_176560.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|12324940|gb|AAG52419.1|AC011622_7 putative disease resistance protein; 27010-23648 [Arabidopsis
           thaliana]
 gi|332196017|gb|AEE34138.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 966

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 235/749 (31%), Positives = 357/749 (47%), Gaps = 123/749 (16%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSSSS       ++ VF SF G DVR   +SHL        I  F D ++ RG  ISP
Sbjct: 1   MASSSSSPRTW---RYRVFTSFHGPDVRKTVLSHLRKQFICNGITMFDDQRIERGQTISP 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
            L+  I  S+ISIV+ S+ YASS WCL+EL++IL+ K   GQIV+ VFY VDPSD     
Sbjct: 58  ELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMTVFYGVDPSDVRKQT 117

Query: 117 ---GYCPSLGW------------MGIFDIPT----------SESVLIEGNVNDISKKLSD 151
              G   S  W              + D+             ES ++E    D+S KL+ 
Sbjct: 118 GEFGIRFSETWARKTEEEKQKWSQALNDVGNIAGEHFLNWDKESKMVETIARDVSNKLNT 177

Query: 152 LFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
               D +D +VG+E+ +++++S L L    E   VGI G  GIGKTTIA A++S +SS F
Sbjct: 178 TISKDFED-MVGIEAHLQKMQSLLHLDNEDEAMIVGICGPSGIGKTTIARALHSRLSSSF 236

Query: 211 EGSYFMQNIR-------DE-----------SEKV---GGLANIHLNFERRRLSRMKVLIV 249
           + + FM+N++       DE             K+     L   HL     RL    VLI+
Sbjct: 237 QLTCFMENLKGSYNSGLDEYGLKLCLQQQLLSKILNQNDLRIFHLGAIPERLCDQNVLII 296

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
              + DL+Q++ L      F PGSR+I+TT D +LL+ H    + + + V   +  ++  
Sbjct: 297 LDGVDDLQQLEALTNETSWFGPGSRIIVTTEDQELLEQH---DINNTYHVDFPTIKEARK 353

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +F R+AF Q+    GF +L   V+K  + +PL L+V+GS L+   E++WES +++ +   
Sbjct: 354 IFCRSAFRQSSAPYGFEKLVERVLKLCSNLPLGLRVMGSSLRRKKEDDWESILHRQENSL 413

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              I+ VL+V YD L   +Q +FL  A FF   D   V   L   +   + G+  L  KS
Sbjct: 414 DRKIEGVLRVGYDNLHKNDQFLFLLIAFFFNYQDNDHVKAMLGDSKLDVRYGLKTLAYKS 473

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI 486
           L+ IS    I MH LLQ++G E V+++   D GKR  L   ++I  VL  ++      GI
Sbjct: 474 LIQISIKGDIVMHKLLQQVGKEAVQRQ---DHGKRQILIDSDEICDVLENDSGNRNVMGI 530

Query: 487 NLDS---LKELYLGG-----CSNLKRF----PEISCNI-----EDL-------------- 515
           + D    L ++Y+         NL+        +  N+     ED+              
Sbjct: 531 SFDISTLLNDVYISAEAFKRIRNLRFLSIYKTRLDTNVRLHLSEDMVFPPQLRLLHWEVY 590

Query: 516 -----------------DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
                            +L++  +E+L   I  L+ L  ++L   S LK V   L +  +
Sbjct: 591 PGKSLPHTFRPEYLVELNLRDNQLEKLWEGIQPLTNLKKMELLRSSNLK-VLPNLSDATN 649

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           L  LNL+ C  L ++P  IGNL  LE L +      K+  +   L+ L  L +  C +L+
Sbjct: 650 LEVLNLALCESLVEIPPSIGNLHKLEKLIMDFCRKLKVVPTHFNLASLESLGMMGCWQLK 709

Query: 619 SLPELPCGSSIHARHCTSLKTLSNSSTLL 647
           ++P++           T++ TL  + T+L
Sbjct: 710 NIPDI----------STNITTLKITDTML 728



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 85/182 (46%), Gaps = 37/182 (20%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT  NL SL+ L + GC  LK  P+IS NI  L + +T +E+LP SI    RL      
Sbjct: 688 VPTHFNLASLESLGMMGCWQLKNIPDISTNITTLKITDTMLEDLPQSI----RL------ 737

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
             SGL+              L++ G + +   P EI       YL     D +KIP  +K
Sbjct: 738 -WSGLQV-------------LDIYGSVNIYHAPAEI-------YLEGRGADIKKIPDCIK 776

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            L  L +L +  C ++ SLPELP     +    C SL+TL +        S   D++ FS
Sbjct: 777 DLDGLKELHIYGCPKIVSLPELPSSLKRLIVDTCESLETLVH----FPFESAIEDLY-FS 831

Query: 661 NC 662
           NC
Sbjct: 832 NC 833


>gi|356514917|ref|XP_003526148.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1106

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 234/758 (30%), Positives = 361/758 (47%), Gaps = 106/758 (13%)

Query: 1   MASSSSSINMIPHP-----KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNR 54
           MAS+S++I           ++DVF+SFRG+D R++F + L  AL ++ IE F DDK + +
Sbjct: 7   MASTSNAIFQCTSSSSSSFEYDVFVSFRGEDTRNSFTAFLFEALKKQGIEAFKDDKDIRK 66

Query: 55  GNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
           G  I+P L  AIEGS + +V+FS+ YASS WCL EL  I        ++++P+FY VDPS
Sbjct: 67  GESIAPELIRAIEGSHVFLVVFSKDYASSTWCLRELAHIWNCIQTSPRLLLPIFYDVDPS 126

Query: 115 D-----AGYCPSLG---------------WMGIFDIPTS----------ESVLIEGNVND 144
                   Y  +                 W  + +   S          +  +IE  V  
Sbjct: 127 QVRKQSGDYEKAFAQHQQSSRFQDKEIKTWREVLNHVASLSGWDIRNKQQHAVIEEIVQQ 186

Query: 145 ISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIY 203
           I   L   F     D LVG+ES   ++   +  G   +   VGI G+GGIGK+T+  A+Y
Sbjct: 187 IKNILGCKFSILPYDNLVGMESHFAKLSKLICLGPVNDVRVVGITGMGGIGKSTLGRALY 246

Query: 204 SNISSHFEGSYFM---------------------QNIRDESEKVGGLANIHLNFERRRLS 242
             IS  F  S ++                     Q++++ + ++  +++  +     RL+
Sbjct: 247 ERISYRFNSSCYIDDISKLYGLEGPLGVQKQLLSQSLKERNLEICNVSDGTI-LAWNRLA 305

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFV-----PGSRVIITTRDVQLLKNHRGSRVGHVF 297
               LIV  ++   KQ+D+  G  +  +      GS +II +RD Q+LK H    V  ++
Sbjct: 306 NANALIVLDNVDQDKQLDMFTGSRNDLLRKRLGKGSIIIIISRDQQILKAHG---VDVIY 362

Query: 298 EVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEE 357
           +VK L+ ND+L LF +  F  N+  + F +L+  V+ +  G PLA++V+GS L       
Sbjct: 363 QVKPLNDNDALRLFCKKVFKNNYIMSDFEKLTYDVLSHCKGHPLAIEVVGSSLFDKDVLH 422

Query: 358 WESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFS 417
           W SA+  L+      I  VL++S+D L+D  + IFLD ACFF  +    V   LD   F+
Sbjct: 423 WRSALTWLRENKSKSIMNVLRISFDQLEDTHKEIFLDIACFFNNDMVEYVKEVLDFRGFN 482

Query: 418 AKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
            + G+  LV KSL+T+ +  I MHDLL ++G  IVR++S + P K SRLW  +D  +V +
Sbjct: 483 PESGLLVLVDKSLITMDSRVIRMHDLLCDLGKYIVREKSPRKPWKWSRLWDVKDFLKVKS 542

Query: 478 ENTSLPT---------GINLDSLKELYLGGCSNLK-----------------RFPEISCN 511
           +N +             + L +++   L   S+LK                    ++S  
Sbjct: 543 DNKAAENVEAIVLSKKSVILQTMRIDALSTMSSLKLLKFGYKNVGFQINFSGTLAKLSNE 602

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           +  L   +   E LP S     +LV+L L   S +K +      L +LRRL+L G   L 
Sbjct: 603 LGYLSWIKYPFECLPPSF-EPDKLVELRLPY-SNIKQLWEGTKPLPNLRRLDLFGSKNLI 660

Query: 572 KLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCG 626
           K+P  I +   LE LNL      E+I  S+    KL+ L L+NCK L  LP    +L  G
Sbjct: 661 KMP-YIEDALYLESLNLEGCIQLEEIGLSIVLSPKLTSLNLRNCKSLIKLPRFGEDLILG 719

Query: 627 SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
             +    C  L+ +  S  LL +  +     N  NC N
Sbjct: 720 KLV-LEGCRKLRHIDPSIGLLKKLRE----LNLKNCKN 752



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 14/150 (9%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD-LKETAIEELPSSIGNLSRLVD 537
            SLP  I  L+SL+ L L GCS +    E+   + D + LK+   +  P    + S    
Sbjct: 754 VSLPNSILGLNSLQYLNLSGCSKVYN-TELLYELRDAEQLKKIDKDGAPIHFQSTSS--- 809

Query: 538 LDLTNCSGLKSVSSRLCN---LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
               +    KSVS  + +    + +R L+LS C  L ++P+ IG +  LE L+L+  +F 
Sbjct: 810 ---DSRQHKKSVSCLMPSSPIFQCMRELDLSFC-NLVEIPDAIGIMSCLERLDLSGNNFA 865

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            +P+ +K+LSKL  L+LQ+CK+L+SLPELP
Sbjct: 866 TLPN-LKKLSKLVCLKLQHCKQLKSLPELP 894



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 15/144 (10%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIE------ELPSSIGNLSRLVDLDLTNCS 544
           L  L L  C +L + P      EDL L +  +E       +  SIG L +L +L+L NC 
Sbjct: 695 LTSLNLRNCKSLIKLPRFG---EDLILGKLVLEGCRKLRHIDPSIGLLKKLRELNLKNCK 751

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-----FEKIPSS 599
            L S+ + +  L SL+ LNLSGC K+    E +  L   E L   +KD     F+   S 
Sbjct: 752 NLVSLPNSILGLNSLQYLNLSGCSKVYN-TELLYELRDAEQLKKIDKDGAPIHFQSTSSD 810

Query: 600 MKQLSKLSDLRLQNCKRLQSLPEL 623
            +Q  K     + +    Q + EL
Sbjct: 811 SRQHKKSVSCLMPSSPIFQCMREL 834



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 26/128 (20%)

Query: 488 LDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +L+ L L G  NL + P I  +  +E L+L+    +EE+  SI    +L  L+L NC 
Sbjct: 645 LPNLRRLDLFGSKNLIKMPYIEDALYLESLNLEGCIQLEEIGLSIVLSPKLTSLNLRNCK 704

Query: 545 GL-----------------------KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
            L                       + +   +  LK LR LNL  C  L  LP  I  L 
Sbjct: 705 SLIKLPRFGEDLILGKLVLEGCRKLRHIDPSIGLLKKLRELNLKNCKNLVSLPNSILGLN 764

Query: 582 SLEYLNLA 589
           SL+YLNL+
Sbjct: 765 SLQYLNLS 772


>gi|105922434|gb|ABF81416.1| NBS-LRR-TIR type disease resistance protein [Populus trichocarpa]
          Length = 925

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 203/621 (32%), Positives = 320/621 (51%), Gaps = 119/621 (19%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           ES  I+   + IS KLS   P+ +K +LVG++S ++ +   +   + E   +GI G+GGI
Sbjct: 2   ESESIKAIADCISYKLSLTLPTISK-ELVGIDSRLEVLNGYIGEETGEAIFIGICGMGGI 60

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDE-SEKVGG-------LANIHLNFE-------- 237
           GKTT+A  +Y  I   FEGS F+ N+R+  +EK G        L++I +  +        
Sbjct: 61  GKTTVARVLYDRIRRRFEGSCFLANVREAFAEKDGPRSLQKKLLSDILMERDINICDSST 120

Query: 238 -----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
                +++L R+K+L+V  D+ D KQ++ L      F PGSR+IIT+RD  +L  +  ++
Sbjct: 121 GIEMIKQKLQRIKILVVLDDVNDRKQLEYLAKEPGWFGPGSRIIITSRDTNVLIGNDDTK 180

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           +   +E ++L+ +D+L LFS+ AF  + PA GF+ELS  V+ YANG+PLA +V+GS+L  
Sbjct: 181 I---YEAEKLNDDDALMLFSQKAFKNDQPAEGFVELSKQVVDYANGLPLAHEVIGSFLYE 237

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            S  EW  A+N++  +P   I  VL+VS+DGL + ++ IFLD ACF KG  +  +   L+
Sbjct: 238 RSIPEWRGAINRMNEIPDGKIIDVLRVSFDGLHESDKKIFLDIACFLKGFKKDRITRILE 297

Query: 413 ACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDP------------ 460
           +  F A IGI  L+ +SL+++S +++ MHDLLQ MG EIVR ES ++P            
Sbjct: 298 SRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 357

Query: 461 ---------------------GKRSRLWH-----------------------PEDIYQVL 476
                                G +   W+                       PED+   L
Sbjct: 358 CLALMDNTGKEKIEAIFLDMPGIKDAQWNMEAFSKMSKLRLLKINNVQLSEGPEDLSNKL 417

Query: 477 N-------ENTSLPTGINLDSLKELYLG---------GCS--------------NLKRFP 506
                    + SLP G+ +D L EL++          GC               NL R P
Sbjct: 418 RFLEWYSYPSKSLPAGLQVDELVELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSRTP 477

Query: 507 EIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
           +++   N+E L L+  T++ E+  S+G+   L  ++L NC  ++ + S L  ++SL+   
Sbjct: 478 DLTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNL-EMESLKVFT 536

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-E 622
           L GCLKLEK P+ + N+  L  L L E    K+ SS++ L  L  L + +CK L+S+P  
Sbjct: 537 LDGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLLSMNSCKNLKSIPSS 596

Query: 623 LPCGSSIHA---RHCTSLKTL 640
           + C  S+       C+ LK +
Sbjct: 597 ISCLKSLKKLDLSGCSELKNI 617



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 3/106 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GC  L++FP++  N+     L L ET I +L SSI +L  L  L
Sbjct: 523 LPSNLEMESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLL 582

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
            + +C  LKS+ S +  LKSL++L+LSGC +L+ +P+ +G +ESLE
Sbjct: 583 SMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKVESLE 628



 Score = 44.3 bits (103), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 13  HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKIS 72
           H    VF   R  D   N +++L + L R  I +           I   L  AIE S +S
Sbjct: 727 HWMASVFPDIRVADT-SNAITYLKSDLARRVIISL------NVKAIRSRLFKAIEESGLS 779

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
           IVIFS   AS  WC +ELVKI+   ++     V PV Y V+ S
Sbjct: 780 IVIFSRDCASLPWCFDELVKIVGFMDEMRSDTVFPVSYDVEQS 822


>gi|357480743|ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
 gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
          Length = 1128

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 219/750 (29%), Positives = 346/750 (46%), Gaps = 159/750 (21%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           ++DVF+SFRG D R+ FV HL A L R+ I TF DD +LN+G+ IS  L  AI  S++SI
Sbjct: 24  RYDVFISFRGSDTRNTFVDHLYAHLIRKGIFTFKDDAQLNKGHSISTQLLHAIRQSRVSI 83

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------ 115
           +IFS+ YASS WCL+E+  I + +         VFY V PSD                  
Sbjct: 84  IIFSKDYASSTWCLDEMATIADCQLNLNHT---VFYDVAPSDVRKQKGVYQNVFAVHSKI 140

Query: 116 -------------AGYC--PSLGWMGIFDIPTSESV--LIEGNVNDISKKLSDLFPSDNK 158
                        A  C   S GW  + + P  E +  +++  +N +  K S        
Sbjct: 141 SKHEPHKVDCWKRAMTCLAGSSGW-DVRNKPEFEEIEKIVQEVINSLGHKFSGFV----- 194

Query: 159 DQLVGVESIIKEIES--QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM 216
           D L+G++  ++ +E   +L S    F  +GI G+GGIGKTT+ + +Y  IS  F    F+
Sbjct: 195 DDLIGIQPRVEALERLLKLRSADDGFRVLGIRGMGGIGKTTLVTVLYDKISYQFHACCFI 254

Query: 217 QNIRDESEKVGGLANIH----------LNFE-----------RRRLSRMKVLIVFYDLTD 255
           +N+  +  + GG   +            N E           R RL  +K+L+V  D+  
Sbjct: 255 ENV-SKIYRDGGCVAVQKQILHQTIREKNLEAYSPSEISRIVRNRLHNIKLLVVLDDIDQ 313

Query: 256 LKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNA 315
           ++Q+  L         GSR+IITTRD  +LK + G+ V  V+E + +S +++L L  R A
Sbjct: 314 IEQLQELHINPKLLCGGSRIIITTRDEHILKQY-GADV--VYEAQLMSDSEALDLLHRKA 370

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD--I 373
           F  ++ ++ F EL          +P                +W + ++ L+  P +D  I
Sbjct: 371 FKSDNSSSTFSEL----------IP----------------QWRATLDGLRNNPSLDKRI 404

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
             VL++S++GL+  E+ IFL  ACFFKG     V   LDAC     IGI  +  KSL+TI
Sbjct: 405 MTVLRISFEGLEPREREIFLHIACFFKGEKADYVRGILDACGLHPDIGIPLIAEKSLITI 464

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--------- 484
            NN+I MH +LQE+G +IV+ +   +P   SRLW   D ++V+      P          
Sbjct: 465 RNNEIHMHGMLQELGRQIVQGQHPNEPEFWSRLWLYRDFHRVMMTEMKAPIEVKAIVLDQ 524

Query: 485 ---GINLDSLKELYLGGCSNLK----------------------------RFPEISCNIE 513
              G   + L+   L    +LK                             F  +  NI+
Sbjct: 525 KEDGSEFNKLRAEDLSKLGHLKLLILCHKNFSGEPIFLSNSLCYLSWNGFPFDSLPSNIQ 584

Query: 514 -----DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
                +L++ ++ I++L   I  L  L  +DL+N   L++  S    +++L R++ +GC+
Sbjct: 585 LHDLVELNMPDSNIKQLWEGIQRLPCLKRMDLSNSKNLRTTPS-FEGIQNLERIDFTGCI 643

Query: 569 KLEKLPEEIGNLESLEYL------NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            L ++   +G L  L +L      NL   DF     S+ ++  L  LRL  C  L++ P+
Sbjct: 644 NLLQVHPSVGLLTELVFLSLQNCTNLTCLDF----GSVSRVWSLRVLRLSGCIGLRNTPD 699

Query: 623 LPCGSSIH---ARHCTSLKTLSNSSTLLTR 649
               +++       C +L  +  S   LT+
Sbjct: 700 FTVAANLEYLDMERCINLSKIDKSIGTLTK 729



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 31/169 (18%)

Query: 490 SLKELYLGGCSNLKRFPE--ISCNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
           SL+ L L GC  L+  P+  ++ N+E LD++    + ++  SIG L++L  L L +C+ L
Sbjct: 682 SLRVLRLSGCIGLRNTPDFTVAANLEYLDMERCINLSKIDKSIGTLTKLRFLSLRHCTKL 741

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLP----------------------------EEIG 578
             +S+   N+ SL  L+L  C     LP                            + IG
Sbjct: 742 FPISNIFDNMTSLTTLDLCECWNFTTLPLPTTVNSPSPLESLIFLDLSFCNISVLPDSIG 801

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
            L+SLE LNL    F  +PS+ K+L+ L+ L L +C RL+ LP+LP  S
Sbjct: 802 KLKSLERLNLQGNHFTTLPSTFKRLANLAYLNLSHCHRLKRLPKLPTKS 850



 Score = 38.9 bits (89), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 33/167 (19%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I L  L EL +   SN+K+  E    + C ++ +DL  +       S   +  L 
Sbjct: 578 SLPSNIQLHDLVELNMPD-SNIKQLWEGIQRLPC-LKRMDLSNSKNLRTTPSFEGIQNLE 635

Query: 537 DLDLTNCSGLKSVSSRL-------------CN------------LKSLRRLNLSGCLKLE 571
            +D T C  L  V   +             C             + SLR L LSGC+ L 
Sbjct: 636 RIDFTGCINLLQVHPSVGLLTELVFLSLQNCTNLTCLDFGSVSRVWSLRVLRLSGCIGLR 695

Query: 572 KLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
             P +     +LEYL++    +  KI  S+  L+KL  L L++C +L
Sbjct: 696 NTP-DFTVAANLEYLDMERCINLSKIDKSIGTLTKLRFLSLRHCTKL 741


>gi|358343904|ref|XP_003636035.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
 gi|355501970|gb|AES83173.1| Tir-nbs-lrr resistance protein, partial [Medicago truncatula]
          Length = 977

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 200/554 (36%), Positives = 300/554 (54%), Gaps = 37/554 (6%)

Query: 133 SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGG 192
           +ES LIE     + +KL+     D     +  E+    ++S +   STE   +G+WG+GG
Sbjct: 10  TESNLIEDITRAVIRKLNQQSTIDLTCNFIPDENYWS-VQSLIKFDSTEVQIIGLWGMGG 68

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG----------GLANIHLNFE----- 237
           IGKTT+A+A++  +S  ++GS F + + + S+  G           L    L+ +     
Sbjct: 69  IGKTTLATAMFQRVSFKYDGSCFFEKVTEVSKSHGINYTCNKLLCKLLKEDLDIDTPKLI 128

Query: 238 ----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFV-PGSRVIITTRDVQLLKNHRGSR 292
               RRRL  MK  IV  D+ + + +  LIG   G++  GS VI+TTRD  +L +     
Sbjct: 129 SSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGWLGSGSTVIVTTRDKHVLIS---GG 185

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           +  ++EVK+++  +SL +FS NAF +  P  G++ELS   I YA G PLAL+VLGS L+ 
Sbjct: 186 IKTIYEVKKMNSRNSLRIFSLNAFDKVSPKDGYVELSKRAIDYARGNPLALKVLGSLLRC 245

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            SE+EW+ A++KLK+MP+ +I  + ++S++ LD  EQNIFLD ACFFKG ++  +   L+
Sbjct: 246 KSEKEWDCALDKLKKMPNNEIDSIFRMSFNELDKTEQNIFLDIACFFKGQERNSITKILN 305

Query: 413 ACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
            C F A IGIS L+ K+LV + S N I MH L+QEMG +IVR+ES+K+PG+RSRL  PE+
Sbjct: 306 ECGFFADIGISHLLDKALVRVDSENCIQMHGLIQEMGKQIVREESLKNPGQRSRLCDPEE 365

Query: 472 IYQVL--NENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
           +Y VL  N  +     I LD+ K  +L   S+     E    +   D K      LP  +
Sbjct: 366 VYDVLKNNRGSEKVEVIFLDATKYTHLILRSDAFEKMENLRLLAVQDHKGVKSISLPDGL 425

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           G L   +   L +   LK+V     +L+ L  L+L     +EKL   + NL +LE ++L+
Sbjct: 426 GLLPENLRYILWDGYPLKTV-PLTSSLEMLVELSLKQS-HVEKLWNGVVNLPNLEIIDLS 483

Query: 590 -EKDFEKIP--SSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKTLS-- 641
             K   + P  S    L  L  L +  CK L+SL    C  +   ++   C +LK  S  
Sbjct: 484 GSKKMIECPNVSGSPNLKDLERLIMNRCKSLKSLSSNTCSPALNFLNVMDCINLKEFSIP 543

Query: 642 NSSTLLTRSSKHWD 655
            SS  L+     WD
Sbjct: 544 FSSVDLSLYFTEWD 557


>gi|242276425|gb|ACS91454.1| M1-comp1 [Linum usitatissimum]
          Length = 1554

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 173/532 (32%), Positives = 282/532 (53%), Gaps = 64/532 (12%)

Query: 1   MASSSSSIN---MIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFID-DKLNRGN 56
           + ++SSS N    +P  +++VFLSFRG D R+     L+  L   KI TFID D+L +G 
Sbjct: 67  VGATSSSTNPSGSLPSVEYEVFLSFRGPDTRYQITDILSRFLHHAKIHTFIDNDELRKGE 126

Query: 57  EISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQ-IVVPVFYLVDPSD 115
           EI  SL SAI+ SKI + I SEGYA S+WCL EL +I+  K +  Q I++P+FY+VDP +
Sbjct: 127 EIKSSLLSAIDQSKIYVPIISEGYADSKWCLMELAEIIRQKEQDPQRIILPIFYMVDPKN 186

Query: 116 A------------------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSD 151
                                     +  +L  +G       +S   +G++ D  K  +D
Sbjct: 187 VRHQTGRYEKAFQEHGAKFEEKIIQSWKDALAKVGQIKGWHVQSNDEQGDIAD--KVYAD 244

Query: 152 LFPSDNK-------DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYS 204
           ++   +K       D+LVG++  IK I  +L   S     VG++G+GGIGKTT A A+Y+
Sbjct: 245 IWSHLSKENSILDTDELVGIDDHIKVILEKLSLNSESVTMVGLYGMGGIGKTTTAKAVYN 304

Query: 205 NISSHFEGSYFMQNIRDESEKVGGLANIHLNFE---------------------RRRLSR 243
            ISS F+   F++NIR+   +  G+  +                          + R+S+
Sbjct: 305 KISSRFDHCCFLENIRETQNQKDGVVVLQQKLVSEILRMDSVGFTNDSGGRKMIKERVSK 364

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            K+LIV  D+ +  + + ++G  + F   SR IIT+R+ ++L     ++   ++EV  +S
Sbjct: 365 SKILIVLDDVDEKFKFEEILGCPNDFDSRSRFIITSRNQKVLSTLNENQC-QLYEVGSMS 423

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
              SL LF ++AF +N P++ ++  +N ++    G+PL L+V+GS L     E WE  + 
Sbjct: 424 EPHSLELFFKHAFKKNTPSSKYVTQANEIVSTTGGLPLTLKVIGSLLYRQQIEVWEDTLE 483

Query: 364 KLKRMPHM---DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
           +L +   +   ++ + LK SYD L+ + + IFLD ACFF    +    +    C F  K 
Sbjct: 484 QLHKTGMVGDDEVYERLKRSYDKLELKAKEIFLDIACFFINTKKEEPYHMWSDCNFYPKS 543

Query: 421 GISRLVGKSLVTISNNKI-TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
            I  L+ + ++ + ++ +  MHD L++MG EIVR+E ++ P KRSR+W  E+
Sbjct: 544 NIIFLIQRCMIQVGDDGVFKMHDQLKDMGREIVRREDVERPWKRSRIWSSEE 595



 Score = 40.8 bits (94), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 22/135 (16%)

Query: 504 RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
           RFP+   +IE L +    +EEL   IG L +L  LDL+ C   K        LK L  L+
Sbjct: 800 RFPK---SIEVLSMSGIQMEEL--DIGELKKLKTLDLSYCKIQKISGGTFGMLKGLIVLD 854

Query: 564 LS--GCLKLEKLPEEIGNLESLEYLN---LAEKDFEKIPSSMKQLSK------------L 606
           L+   C  L ++  +IG L SLE L    + E +  + P  +K+LS             L
Sbjct: 855 LNFFNCTNLREVVADIGQLLSLEVLRTLAVEEVEINEFPLDLKELSTSSRILNLSEFLDL 914

Query: 607 SDLRLQNCKRLQSLP 621
             LR+ +CK    +P
Sbjct: 915 EVLRVYDCKDGMDIP 929


>gi|297805476|ref|XP_002870622.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316458|gb|EFH46881.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1127

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 349/755 (46%), Gaps = 143/755 (18%)

Query: 3   SSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL 62
           +SSSS++ I   +H VF SF G DVR  F+SHL+     + I TF D+K++RG  I P L
Sbjct: 2   ASSSSLSCIK--RHQVFSSFHGPDVRRGFLSHLHNHFASKGITTFNDEKIDRGQTIGPEL 59

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKIL---------------------------- 94
             AI  S++S+V+ S+ YASS WCL+EL++IL                            
Sbjct: 60  VQAIRESRVSVVLLSKKYASSSWCLDELLEILKCNEAQGQIVMTIFYDVDPSDVKKQRGE 119

Query: 95  --------------ESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGI---------FDIP 131
                         E K ++ + +  V  +       +  S+ +            FD P
Sbjct: 120 FGKAFEKTCEGKTEEVKQRWIEALAHVATIAGEHSLNWYVSMNFSAFMFLKKVFVNFDPP 179

Query: 132 TS---------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF 182
           T+         E+ +I+    D+  KL +L PS + D +VG+E+ + +++S L   S E 
Sbjct: 180 TAFCFAFARANEAEMIQKIATDVLNKL-NLTPSRDFDGMVGLEAHLAKLKSMLCLESDEV 238

Query: 183 NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR---------DESEKVGGLANI- 232
             +GIWG  GIGK+TIA A+ + +SS F+   FM N++         DE +    L N  
Sbjct: 239 KMIGIWGPAGIGKSTIARALDNQLSSSFQLKCFMGNLKGSLKSIVGVDEHDSKLWLQNQL 298

Query: 233 -------------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITT 279
                        HL   + RL   +VLI+  D+ DLK +++L   L  F  GSR+I+TT
Sbjct: 299 MSKILNQENMKIHHLGAIKERLHDQRVLIILDDVDDLKILEVLAEELSWFGFGSRIIVTT 358

Query: 280 RDVQLLKNHRGSRVGHV-FEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANG 338
            D ++LK H  + + HV F  KE    D+L +   +AF Q+    GF E++  V      
Sbjct: 359 EDKKILKAHGINDIYHVNFPSKE----DALEILCLSAFKQSSVPDGFEEVAKKVANLCGK 414

Query: 339 VPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACF 398
           +PL L V+G  L+G  +  WE  +++++      I+ +L++ +D L  + Q++FL  ACF
Sbjct: 415 LPLGLCVVGKSLRGQRKHVWELQLSRIEASLDRKIEDILRIGFDRLSKKNQSLFLHIACF 474

Query: 399 FKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQEMGGEIVRQESI 457
           F       V   L         G+  L  KSLV  S +  I MH LLQ++G +IV ++S 
Sbjct: 475 FNNEVADDVTTLLSDSNLDVGNGLETLADKSLVRKSTSGHIVMHHLLQQLGRQIVHEQS- 533

Query: 458 KDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDS--LKELYLG-----GCSNLK----- 503
            +PGKR  L+  ++I  VL+  T   +  GI+ D+  + E+ +G     G  NL+     
Sbjct: 534 DEPGKRQFLFEADEICDVLSTETGTGSVIGISFDTSNIGEVSVGKGAFEGMRNLRFLRIF 593

Query: 504 ----------------------------RFPEISC-------NIEDLDLKETAIEELPSS 528
                                        +P  S         + +L +  + I++L   
Sbjct: 594 RRWFGGEGTLQIPEDLDYLPLLRLLHWEFYPRTSLPRRFQPERLMELHMPYSKIKKLWGG 653

Query: 529 IGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
           I +L  L  +DL     LK + + L N  +L  L L GC  L +LP  I NL+ L+ L++
Sbjct: 654 IQSLPNLKIIDLMFSRQLKEIPN-LSNATNLEELTLEGCGSLVELPSSIKNLQKLKILDV 712

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                 ++  S   L+ L  L +  C RL++ PE+
Sbjct: 713 GFCCMLQVIPSNINLASLKILTMNGCSRLRTFPEI 747



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 93/183 (50%), Gaps = 36/183 (19%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLDL 540
           +P+ INL SLK L + GCS L+ FPEIS NI+ L+L +T IE++P S+ G LSRL  L++
Sbjct: 721 IPSNINLASLKILTMNGCSRLRTFPEISSNIKVLNLGDTDIEDVPPSVAGCLSRLDRLNI 780

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             CS             SL+RL          +P  I +      L L   D E IP  +
Sbjct: 781 --CSS------------SLKRLT--------HVPLFITD------LILNGSDIETIPDCV 812

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
             L++L  L ++ C +L+S+P LP    +  A  C SLK +  S    T      ++  F
Sbjct: 813 IGLTRLEWLSVKRCTKLESIPGLPPSLKVLDANDCVSLKRVRFSFHTPT------NVLQF 866

Query: 660 SNC 662
           SNC
Sbjct: 867 SNC 869


>gi|449530525|ref|XP_004172245.1| PREDICTED: TMV resistance protein N-like, partial [Cucumis sativus]
          Length = 623

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 210/636 (33%), Positives = 309/636 (48%), Gaps = 119/636 (18%)

Query: 51  KLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYL 110
           KL+RG EI  SL  AIEGSKISIV+ SE YASS WCLNELVKI+      GQ+V+P+FY 
Sbjct: 2   KLSRGEEICASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYK 61

Query: 111 VDPSDAG-----------------YCPSLGWMGIFDIPT-----------SESVLIEGNV 142
           VDPS+ G                 +     W       +            E+ LI+  V
Sbjct: 62  VDPSEVGKQSGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRDDEANLIQNIV 121

Query: 143 NDISKKLS-DLFPSDNKDQLVGVESIIKEIESQLLS-GSTEFNTVGIWGIGGIGKTTIAS 200
            ++ KKL       D     VG++  ++ +   ++S G T F   G++G+GG+GKTTIA 
Sbjct: 122 QEVWKKLDRATMQLDVAKYPVGIDIQVRNLLPHVMSNGITMF---GLYGVGGMGKTTIAK 178

Query: 201 AIYSNISSHFEGSYFMQNIRDESEKVGGLANIH---------------------LNFERR 239
           A+Y+ I+  FEG  F+ NIR+ S + GGL                         +   R 
Sbjct: 179 ALYNKIADEFEGCCFLSNIREASNQYGGLVQFQKELLCEILMDDSIKVSNLPRGITIIRN 238

Query: 240 RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEV 299
           RL   K+L++  D+   +Q+  L G  D F  GS+VI TTR+ QLL  H   ++ +   V
Sbjct: 239 RLYSKKILLILDDVDTREQLQALAGGHDWFGHGSKVIATTRNKQLLVTHGFDKMQN---V 295

Query: 300 KELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE---- 355
             L Y+++L LFS + F  +HP   +LELS   + Y  G+PLAL+VLGS+L  + +    
Sbjct: 296 GGLDYDEALELFSWHCFRNSHPLNVYLELSKRAVDYCKGLPLALEVLGSFLHSIGDPSNF 355

Query: 356 ----EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL 411
               +E+E      K     DIQ  L++SYDGL+DE + IF   +C F   D   V   L
Sbjct: 356 KRILDEYE------KHYLDKDIQDSLRISYDGLEDEVKEIFCYISCCFVREDICKVKMML 409

Query: 412 DACR-FSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
           +AC     + GI++L+  SL+TI   N++ MH+++Q+MG  I   E+ K   KR RL   
Sbjct: 410 EACGCLCLEKGITKLMNLSLLTIGRFNRVEMHNIIQQMGRTIHLSETSKSH-KRKRLLIK 468

Query: 470 EDIYQVLNENTSL------------PTGINLDS--------LKELYLGGCS--------- 500
           +D   VLN N               PT +++DS        L  L +G  +         
Sbjct: 469 DDAMDVLNGNKEARAVKVIKLNFPKPTKLDIDSRAFDKVKNLVVLEVGNATSSESSTLEY 528

Query: 501 --------NLKRFPEISC-------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
                   N  +FP  S        N+ +L L  ++I+       +  RL +++L++ + 
Sbjct: 529 LPSSLRWMNWPQFPFSSLPTTYTMENLIELKLPYSSIKHFGQGYMSCERLKEINLSDSNL 588

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
           L  +   L    +L+ LNL GC  L K+ E IG+L+
Sbjct: 589 LVEIPD-LSTAINLKYLNLVGCENLVKVHESIGSLK 623


>gi|399920215|gb|AFP55562.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1083

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 222/662 (33%), Positives = 332/662 (50%), Gaps = 94/662 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F   L   L R+ I TF DD  L RG  IS  L +AIE S    
Sbjct: 18  KYDVFLSFRGEDTRKGFTDCLYHELQRQGIRTFRDDPHLERGTSISLELLTAIEQSS--- 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTS 133
             F+E +              E + K+G+    V         G+  +L  +      TS
Sbjct: 75  --FAEAFQ-------------EHEEKFGEGNKEV--------EGWRDALTKVASLAGWTS 111

Query: 134 ESVLIEGN-VNDISKKL-SDLFPS----DNKDQLVGVESIIKEIESQLLSGSTEFNTVGI 187
           E    E   + +I + L S + PS     + ++LVG+++ +++I   L+  + +   +GI
Sbjct: 112 EKYRYETELIREIVQALWSKVHPSLTVFGSSEKLVGMDTKLEDIYDLLVEEANDVRFIGI 171

Query: 188 WGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH-------------- 233
           WG+GG+GKTT+A  +Y  IS  F+   F+ NIR+ S    GL  +               
Sbjct: 172 WGMGGLGKTTLARVVYEEISHRFDVCVFLANIREVS-ATHGLVYLQKQILSQILKEENVK 230

Query: 234 -------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLK 286
                  +   +R L    VL+V  D+   +Q++ L+G  D F   SR+IITTR+ ++L 
Sbjct: 231 VWDVYSGITMTKRCLCNKAVLLVLDDVDQSEQLEHLVGEKDWFGLRSRIIITTRNQRVLV 290

Query: 287 NHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVL 346
            H    V   +E+K L+ +++L LFS  AF +  P   + EL    + YA G+PLAL+ L
Sbjct: 291 THG---VEKPYELKGLNKDEALQLFSWKAFRKCEPEEDYAELCKSFVTYAGGLPLALKTL 347

Query: 347 GSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYL 406
           GS+L   S   W SA+ KL++ P+  + ++LK+S+DGLD+ E+ IFLD ACF +  D   
Sbjct: 348 GSFLYKRSLHSWSSALQKLQQTPNRSVFEILKLSFDGLDEMEKKIFLDIACFRRLYDNES 407

Query: 407 VMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSR 465
           ++  + +  F  +I I  LV KSL+TI S+N++ +HDL+ EMG EIVRQE+ K+PG RSR
Sbjct: 408 MIEQVHSFDFCPRIIIDVLVEKSLLTISSDNRVGVHDLIHEMGCEIVRQEN-KEPGGRSR 466

Query: 466 LWHPEDIYQVLNENTSLPT--GINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE 523
           L    DI+ V   NT      GI L  L EL      NL+ F ++ C ++ L +    + 
Sbjct: 467 LCLHNDIFHVFTNNTGTEAIEGILL-HLAELEEADW-NLEAFSKM-CKLKLLYIHNLRLS 523

Query: 524 ELPSSIGNLSRLVDLD---------------LTNCSGLKSVSSRLCN----LKSLRRLNL 564
             P  + N  R ++                 LT  S + S    L N     ++L+ ++L
Sbjct: 524 LGPIYLPNALRFLNWSWYPSKSLPPCFQSDKLTELSLVHSNIDHLWNGIKYSRNLKSIDL 583

Query: 565 SGCLKLEKLPEEIG--NLESLEY---LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           S  + L + P+  G  NLE L      NL E     +  S   L KL  L L+NCK ++S
Sbjct: 584 SYSINLTRTPDFTGIPNLEKLVLEGCTNLVE-----VHQSTGLLQKLRILNLRNCKSIKS 638

Query: 620 LP 621
           LP
Sbjct: 639 LP 640



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 37/216 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSR-LV 536
           SLP+ ++++ L+   + GCS LK  PE    ++ L    L  TA+E+LPS I +LS  LV
Sbjct: 638 SLPSEVHMEFLETFDVSGCSKLKMIPEFVGQMKRLSRLSLSGTAVEKLPS-IEHLSESLV 696

Query: 537 DLDLTNC----------------------------SGLKSVSSRLCNLKSLRRLNLSGCL 568
           +LDL+                                L  + + L +  SL  L L+ C 
Sbjct: 697 ELDLSGIVIREQPYSLFLKQNLIVSSFGLFPRKSPHPLIPLLASLKHFSSLTTLKLNDCN 756

Query: 569 KLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
             E +LP +IG+L SLE+L L   +F  +P+S+  LSKL  + ++NCKRLQ LPEL    
Sbjct: 757 LCEGELPNDIGSLSSLEWLYLGGNNFSTLPASIHLLSKLRYINVENCKRLQQLPELSAND 816

Query: 628 SI-HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            +    +CTSL+   +   L   ++  W   N  NC
Sbjct: 817 VLSRTDNCTSLQLFPDPPDLCRITTSFW--LNCVNC 850


>gi|255582274|ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223528407|gb|EEF30442.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 195/556 (35%), Positives = 291/556 (52%), Gaps = 96/556 (17%)

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           PS     LVG++S ++E+ S +  G  +   +GI G+GGIGKTTIA+A Y+ +S  FEG 
Sbjct: 6   PSHPGSDLVGLDSRLEELHSHVGIGQNDVRIIGICGMGGIGKTTIATAYYNWMSIQFEGR 65

Query: 214 YFMQNIRDESEK---------------VGGLANIH-----LNFERRRLSRMKVLIVFYDL 253
            F+ N+R+ S K               +G    I       +  + RL   +VL+V  D+
Sbjct: 66  AFLANVREVSSKGRLLSLQEQLLSEILMGKKVKIWNVYNGTDMIKSRLRYKRVLVVIDDV 125

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
             L Q+  L G+ D F PGSRVIITTRD  LL +H    V  +++VK L+ +++L LFS 
Sbjct: 126 NQLSQLQNLAGKSDWFGPGSRVIITTRDEHLLISHG---VDEIYKVKGLNKSEALQLFSL 182

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF  NHP   ++ LS  ++ YANG+PLAL+VLGS+L   + EE  +A++++K +P  +I
Sbjct: 183 KAFRNNHPQKDYMTLSTDIVYYANGLPLALEVLGSFLFNRTLEESRNALDRIKEIPKDEI 242

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
              L++S+DGL++ E+ IFLD ACFFKG +   +   LD C F   IGI  L+ KSL+TI
Sbjct: 243 LDALQISFDGLEEMEKQIFLDIACFFKGKNIDHITKILDGCGFYPDIGIRVLIEKSLITI 302

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS----------LP 483
              ++ MHDLLQEMG ++V+QES ++PG+RSRLW  +DI+ VL +NT           LP
Sbjct: 303 VGERLWMHDLLQEMGWKLVQQESPEEPGRRSRLWLYKDIFHVLTKNTGTADVEGMVLDLP 362

Query: 484 TG---------------INLDSLKELY----LGGCSNLKR--------FPEISCNIE--- 513
                            I L   + +Y    L   SN  R        F  + C  +   
Sbjct: 363 EAEEIQLEAQAFRKLKKIRLLKFRNVYFSQSLEYLSNELRYLKWYGYPFRNLPCTFQSNE 422

Query: 514 --DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL-KSVSSRLCNLKSLRRLNLSGCLKL 570
             +L++  + +E++       ++L  + L++   L K+   R   + SL +L L GCL+L
Sbjct: 423 LLELNMSYSQVEQIWEGTKQFNKLKIMKLSHSKNLVKTPDFR--GVPSLEKLVLEGCLEL 480

Query: 571 EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH 630
           +++ + IG LE L  LNL                       ++CK+L  LPE     SI+
Sbjct: 481 QEIDQSIGILERLALLNL-----------------------KDCKKLSILPE-----SIY 512

Query: 631 ARHCTSLKTLSNSSTL 646
                 +  LS  S L
Sbjct: 513 GLKALKIVNLSGCSIL 528



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 21/199 (10%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVD 537
           LP  I  L +LK + L GCS L    E   +I   E+LD+  T +++  SS  +   L  
Sbjct: 507 LPESIYGLKALKIVNLSGCSILDYMLEELGDIKSLEELDVSGTTVKQPFSSFSHFKNLKI 566

Query: 538 LDLTNCSG------------LKSVSSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLE 584
           L L  CS             L    S   +L SL  L+L  C L+ E +P ++  L SL+
Sbjct: 567 LSLRGCSEQPPAIWNPHLSLLPGKGSNAMDLYSLMVLDLGNCNLQEETIPTDLSCLSSLK 626

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS-IHARHCTSLKTLSNS 643
              L+  +F  +P+S+ +LSKL  L L NC+ LQS+  +P     + A+ C++L+TL  +
Sbjct: 627 EFCLSGNNFISLPASVCRLSKLEHLYLDNCRNLQSMQAVPSSVKLLSAQACSALETLPET 686

Query: 644 STLLTRSSKHWDIFNFSNC 662
             L    S     FNF+NC
Sbjct: 687 LDLSGLQSPR---FNFTNC 702



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 3/131 (2%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
             + LK + L    NL + P+     ++E L L+    ++E+  SIG L RL  L+L +C
Sbjct: 442 QFNKLKIMKLSHSKNLVKTPDFRGVPSLEKLVLEGCLELQEIDQSIGILERLALLNLKDC 501

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             L  +   +  LK+L+ +NLSGC  L+ + EE+G+++SLE L+++    ++  SS    
Sbjct: 502 KKLSILPESIYGLKALKIVNLSGCSILDYMLEELGDIKSLEELDVSGTTVKQPFSSFSHF 561

Query: 604 SKLSDLRLQNC 614
             L  L L+ C
Sbjct: 562 KNLKILSLRGC 572


>gi|105922695|gb|ABF81431.1| TIR-NBS-LRR-TIR type disease resistance protein [Populus
           trichocarpa]
 gi|105923067|gb|ABF81454.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 918

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 198/670 (29%), Positives = 324/670 (48%), Gaps = 140/670 (20%)

Query: 22  FRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGY 80
           FR KD R+NF SHL + L +  ++ ++DD+ L RG  I P+L  A               
Sbjct: 43  FRDKDTRNNFTSHLYSNLKQRGVDVYMDDRELERGKTIEPALWKA--------------- 87

Query: 81  ASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSESVLIEG 140
                       I ES+N+   I +   Y                               
Sbjct: 88  ------------IEESRNESESIKIIAEY------------------------------- 104

Query: 141 NVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIAS 200
               IS KLS   P+ +K +LVG++S ++ +   +     +   +GI G+GG+GKTT+A 
Sbjct: 105 ----ISYKLSITLPTISK-KLVGIDSRLQVLNGYIGEEVGKAIFIGICGMGGLGKTTVAR 159

Query: 201 AIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFY--------- 251
            +Y  I   FEGS F+ N++++  +  G   +        L     +   Y         
Sbjct: 160 VVYDRIRWQFEGSCFLANVKEDFAREDGPRRLQEQLLSEILMERASVWDSYRGIEMIKRR 219

Query: 252 -----------DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVK 300
                      D+ + +Q++ L      F PGSR+IIT+RD Q+L  +    V  ++E +
Sbjct: 220 LRLKKILLILDDVDEKEQLEFLAAESKWFGPGSRIIITSRDKQVLTRNG---VARIYEAE 276

Query: 301 ELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWES 360
           +L+ +D+LTLFS+ AF  + PA  F+ELS  V+ YA G+PLAL+V+GS++ G S  EW S
Sbjct: 277 KLNDDDALTLFSQKAFKNDQPAEDFVELSKQVVGYATGLPLALEVIGSFMHGRSILEWGS 336

Query: 361 AVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKI 420
           A+N+L  +P  +I  VL++S+DGL + ++ IFLD ACF  G     +   L++  F+A I
Sbjct: 337 AINRLNDIPDREIIDVLRISFDGLHESDKKIFLDIACFLMGFKIDRITRILESRGFNAGI 396

Query: 421 GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           GIS L+ +SL+++S +++ MH+LLQ MG EIVR ES ++PG+RSRLW  +D+   L +NT
Sbjct: 397 GISVLIERSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYKDVCLALMDNT 456

Query: 481 SL----PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGN----- 531
                    +++  +KE       N+K F ++S  +  L +    + E P ++ N     
Sbjct: 457 GKEKIEAIFLDMPGIKEAQW----NMKAFSKMS-RLRLLKIHNVQLSEGPEALSNELRFL 511

Query: 532 ---------------LSRLVDLDLTNCS------GLKS-VSSRLCNLK------------ 557
                          +  LV+L + N S      G KS V+ ++ NL             
Sbjct: 512 EWNSYPSKSLPACFQMDELVELHMANSSIEQLWYGYKSAVNLKIINLSNSLNLIKTPDLT 571

Query: 558 ---SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQN 613
              +L  L L GC  L ++   + + + L+Y+NL + K    +P+++ ++  L    L  
Sbjct: 572 GILNLESLILEGCTSLSEVHPSLAHHKKLQYVNLVKCKSIRILPNNL-EMESLKVCTLDG 630

Query: 614 CKRLQSLPEL 623
           C +L+  P++
Sbjct: 631 CSKLEKFPDI 640



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 3/143 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDL 538
           LP  + ++SLK   L GCS L++FP+I  N+  L    L ET I +L SSI +L  L  L
Sbjct: 614 LPNNLEMESLKVCTLDGCSKLEKFPDIVGNMNCLTVLCLDETGITKLCSSIHHLIGLGLL 673

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE  +++     ++P+
Sbjct: 674 SMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPENLGKVESLEEFDVSGTSIRQLPA 733

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L  L  L    C+R+  LP
Sbjct: 734 SIFLLKNLKVLSSDGCERIAKLP 756


>gi|334182655|ref|NP_173203.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332191491|gb|AEE29612.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1049

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 216/679 (31%), Positives = 323/679 (47%), Gaps = 108/679 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R   VSHL AAL    I TF DD +L  G+ IS  L  A+  S  ++
Sbjct: 11  KYDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEIGDHISDELHRALGSSSFAV 70

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC-------------- 119
           V+ SE YA+SRWCL EL  I+E   +    V P+FY VDPS   +               
Sbjct: 71  VVLSENYATSRWCLLELQLIMELMKEGRLEVFPIFYGVDPSVVRHQLGSFSLVKYQGLEM 130

Query: 120 --PSLGWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               L W    ++  +           E++++     DIS++++ +   D+ + +VG+++
Sbjct: 131 VDKVLRWREALNLIANLSGVVSSHCVDEAIMVGEIARDISRRVTLMHKIDSGN-IVGMKA 189

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            ++ +   L   S E   VGIWG+GGIGKT+I   +Y  +S  F    F++NI+  S K 
Sbjct: 190 HMEGLNHLLDQESNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVS-KD 248

Query: 227 GGLANIHLNFE----------------------RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
            G    HL  E                      ++RL   KV +V   +  + Q+  L  
Sbjct: 249 NGHDLKHLQKELLSSILCDDIRLWSVEAGCQEIKKRLGNQKVFLVLDGVDKVAQVHALAK 308

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF-GQNHPAA 323
             + F PGSR+IITTRD+ LL N  G  V  V+EVK L   D+L +F + AF G   P  
Sbjct: 309 EKNWFGPGSRIIITTRDMGLL-NTCGVEV--VYEVKCLDDKDALQMFKQIAFEGGLPPCE 365

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKG--MSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           GF +LS    K A+G+P A+Q    +L+G   S EEWE A+  L+     +I ++LK+SY
Sbjct: 366 GFDQLSIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALGALESSLDENIMEILKISY 425

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITM 440
           +GL    QN+FL   C F G+    + + L      + + I  L  KSL+ IS N  + M
Sbjct: 426 EGLPKPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIM 485

Query: 441 HDLLQEMGGEIVRQE------------------SIKDPGKRSRLW--HPEDIYQVLNENT 480
           H L+++MG EI+R +                  + +D G+++     H  D+  VL+   
Sbjct: 486 HKLVEQMGREIIRDDMSLARKFLRDPMEIRVALAFRDGGEQTECMCLHTCDMTCVLSMEA 545

Query: 481 SLPTGI-NLDSLK-------------------------ELYLGGCSNLKRFPEIS--CNI 512
           S+   + NL  LK                          L+      L+  P  S  C +
Sbjct: 546 SVVGRMHNLKFLKVYKHVDYRESNLQLIPDQPFLPRSLRLFHWDAFPLRALPSGSDPCFL 605

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
            +L+L+ + +E L S    L  L  LD+T    LK +   L ++ SL  L L  C +LE 
Sbjct: 606 VELNLRHSDLETLWSGTPMLKSLKRLDVTGSKHLKQLPD-LSSITSLEELLLEQCTRLEG 664

Query: 573 LPEEIGNLESLEYLNLAEK 591
           +PE IG   +L+ L L+ +
Sbjct: 665 IPECIGKRSTLKKLKLSYR 683



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 30/191 (15%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSR 534
           E+ S     +   LKEL L    N+++ P   C++   E LDL     E LP ++ +LSR
Sbjct: 785 ESFSFDVFPDFPDLKELKLVNL-NIRKIPSGICHLDLLEKLDLSGNDFENLPEAMSSLSR 843

Query: 535 LVDLDLTNCSGLKSVS----------SRLCNLKSLRRLN---------------LSGCLK 569
           L  L L NC  L+ +           +   NL+SL +L+               L  C  
Sbjct: 844 LKTLWLQNCFKLQELPKLTQVQTLTLTNCRNLRSLAKLSNTSQDEGRYCLLELCLENCKS 903

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SS 628
           +E L +++ +   L  L+L+  DFE +PSS++ L+ L  L L NCK+L+S+ +LP     
Sbjct: 904 VESLSDQLSHFTKLTCLDLSNHDFETLPSSIRDLTSLVTLCLNNCKKLKSVEKLPLSLQF 963

Query: 629 IHARHCTSLKT 639
           + A  C SL+ 
Sbjct: 964 LDAHGCDSLEA 974



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 4/90 (4%)

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
           +LK L+ +NL+    + K+P  I +L+ LE L+L+  DFE +P +M  LS+L  L LQNC
Sbjct: 797 DLKELKLVNLN----IRKIPSGICHLDLLEKLDLSGNDFENLPEAMSSLSRLKTLWLQNC 852

Query: 615 KRLQSLPELPCGSSIHARHCTSLKTLSNSS 644
            +LQ LP+L    ++   +C +L++L+  S
Sbjct: 853 FKLQELPKLTQVQTLTLTNCRNLRSLAKLS 882


>gi|296089409|emb|CBI39228.3| unnamed protein product [Vitis vinifera]
          Length = 1161

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 209/558 (37%), Positives = 300/558 (53%), Gaps = 92/558 (16%)

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
             G+   +KE++S +   S +   +GI+G+GGIGKTTIA  +Y+NIS  FE   F++N+R
Sbjct: 13  FFGMNFHLKELKSLIKIESNDVRMIGIYGLGGIGKTTIAKVVYNNISHQFESRIFLENVR 72

Query: 221 DES-----------EKVGGLA--------NIH--LNFERRRLSRMKVLIVFYDLTDLKQI 259
           + S           E + G+A        NIH  +N  R R    +VL++  D+   +Q+
Sbjct: 73  ERSKDHSSLLQLQKELLNGVAKGKYLKISNIHEGVNVIRNRFLSKRVLLILDDVDKSEQL 132

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             L+G    F P SR+IIT+RD  LL+ +    +   +EVK L Y +S+ LF  +AF QN
Sbjct: 133 QFLVGEHGWFGPRSRIIITSRDQHLLEEYE---MDASYEVKVLDYEESMQLFCLHAFKQN 189

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                +++LSN V+ Y NG+PLAL++LGS+L   S+ EWES + KLKR P+M++Q VLK+
Sbjct: 190 ILRKDYVDLSNDVVNYVNGLPLALEILGSFLFNKSKLEWESTLQKLKRKPNMNVQNVLKI 249

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           S+DGLD+ E+ IFLD ACFFKG ++  V   LD     A I I  L  K L+T+S+N I 
Sbjct: 250 SFDGLDEIEKEIFLDVACFFKGWNETDVTRLLD----HANIVIRVLSDKCLITLSHNIIW 305

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLD-------- 489
           MHDL+QEMG EIVRQ   K+PGK SRLW PEDI  VL     T    GI LD        
Sbjct: 306 MHDLVQEMGREIVRQNHPKEPGKWSRLWDPEDICLVLRRKMGTEAIEGIFLDMSRSREIS 365

Query: 490 ----SLKEL----------------YLGGCSNLKRFPE----ISCNIEDLDLKETAIEEL 525
               + + +                Y+G        PE     S ++  L  +  +++ L
Sbjct: 366 FTTEAFRRMERLRLFKVYWSHGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEGYSLKSL 425

Query: 526 PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           PS+      L++L+L + S ++ +      L+ L+ L LS    L ++P    N+ +LE 
Sbjct: 426 PSNFHG-ENLIELNLKH-SNIEQLWQGKKYLEELKMLTLSESQLLNEIP-HFSNMPNLEQ 482

Query: 586 LN--LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP--------------------EL 623
           LN  L EK  +K+ SS+  L KL+ L L+ C+++ SLP                    EL
Sbjct: 483 LNIELCEK-LDKVDSSIGILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAIDEL 541

Query: 624 PCGSSIHARHCTSLKTLS 641
           P  SSIH  H T L+TLS
Sbjct: 542 P--SSIH--HLTQLQTLS 555



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 94/149 (63%), Gaps = 4/149 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SL+EL L GCSNL+ FPEI  ++E   +L+L  T I+ELP SIG L+ L 
Sbjct: 635 SLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTCIKELPPSIGYLNHLT 694

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L L  C  L+S+ S +C LKSL  L+L  C  LE  PE + N+E L  L+L+    +++
Sbjct: 695 FLGLQCCQNLRSLPSSICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKEL 754

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           PSS++ L+ L+ +RL   K L+SLP   C
Sbjct: 755 PSSIEYLNHLTSMRLVESKNLRSLPSSIC 783



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 90/145 (62%), Gaps = 4/145 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SL+EL L  CSNL+ FPEI  N+E    LDL  T I+ELPSSI  L+ L 
Sbjct: 706 SLPSSICRLKSLEELDLYYCSNLEIFPEIMENMECLIKLDLSGTHIKELPSSIEYLNHLT 765

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            + L     L+S+ S +C LK L +LNL GC  LE  PE + ++E L+ L+L+    +K+
Sbjct: 766 SMRLVESKNLRSLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKL 825

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP 621
           PSS+  L+ L+  RL  C  L+SLP
Sbjct: 826 PSSIGYLNHLTSFRLSYCTNLRSLP 850



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 92/149 (61%), Gaps = 4/149 (2%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L SL+EL L GCSNL  FPEI  N+E   +L+L  T ++ LPSSI  L+ L 
Sbjct: 564 SLPSSICRLKSLEELDLYGCSNLGTFPEIMENMEWLTELNLSGTHVKGLPSSIEYLNHLT 623

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            L+L  C  L+S+ S +  LKSL  L+L GC  LE  PE + ++E L  LNL+    +++
Sbjct: 624 RLELRCCKNLRSLPSSIWRLKSLEELDLFGCSNLETFPEIMEDMECLMELNLSRTCIKEL 683

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
           P S+  L+ L+ L LQ C+ L+SLP   C
Sbjct: 684 PPSIGYLNHLTFLGLQCCQNLRSLPSSIC 712



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 3/137 (2%)

Query: 488 LDSLKELYLGGCSNLKRFP---EISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           L  L  L L GC  +   P   +   +++ L L   AI+ELPSSI +L++L  L +  C 
Sbjct: 501 LKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAIDELPSSIHHLTQLQTLSIRGCE 560

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S+ S +C LKSL  L+L GC  L   PE + N+E L  LNL+    + +PSS++ L+
Sbjct: 561 NLRSLPSSICRLKSLEELDLYGCSNLGTFPEIMENMEWLTELNLSGTHVKGLPSSIEYLN 620

Query: 605 KLSDLRLQNCKRLQSLP 621
            L+ L L+ CK L+SLP
Sbjct: 621 HLTRLELRCCKNLRSLP 637



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 16/160 (10%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L  L++L L GCS+L+ FPEI  ++E    LDL  T+I++LPSSIG L+ L 
Sbjct: 777 SLPSSICRLKFLEKLNLYGCSHLETFPEIMEDMECLKKLDLSGTSIKKLPSSIGYLNHLT 836

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
              L+ C+ L+S+ S +  LKSL +L+LSG       P  +      E L L++ +   I
Sbjct: 837 SFRLSYCTNLRSLPSSIGGLKSLTKLSLSG------RPNRVT-----EQLFLSKNNIHHI 885

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
           PS + QL  L  L + +CK L+ +P+LP     I A  CT
Sbjct: 886 PSVISQLCNLECLDISHCKMLEEIPDLPSSLREIDAHGCT 925



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 12/191 (6%)

Query: 441 HDLLQEMGGEIVR---QESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLG 497
           H  +  MG E  +    E  + P    R  H E  Y +     SLP+  + ++L EL L 
Sbjct: 386 HGFVNYMGKEYQKFLLPEDFEIPSHDLRYLHWEG-YSL----KSLPSNFHGENLIELNLK 440

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN---CSGLKSVSSRLC 554
             SN+++  +    +E+L +   +  +L + I + S + +L+  N   C  L  V S + 
Sbjct: 441 H-SNIEQLWQGKKYLEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELCEKLDKVDSSIG 499

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
            LK L  LNL GC K+  LP  I  L SL+ L L     +++PSS+  L++L  L ++ C
Sbjct: 500 ILKKLTLLNLRGCQKISSLPSTIQYLVSLKRLYLHSIAIDELPSSIHHLTQLQTLSIRGC 559

Query: 615 KRLQSLPELPC 625
           + L+SLP   C
Sbjct: 560 ENLRSLPSSIC 570



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 5/140 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L+ LK L L     L   P  S   N+E L+++    ++++ SSIG L +L  L+L  C 
Sbjct: 454 LEELKMLTLSESQLLNEIPHFSNMPNLEQLNIELCEKLDKVDSSIGILKKLTLLNLRGCQ 513

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIPSSMKQL 603
            + S+ S +  L SL+RL L   + +++LP  I +L  L+ L++   ++   +PSS+ +L
Sbjct: 514 KISSLPSTIQYLVSLKRLYLHS-IAIDELPSSIHHLTQLQTLSIRGCENLRSLPSSICRL 572

Query: 604 SKLSDLRLQNCKRLQSLPEL 623
             L +L L  C  L + PE+
Sbjct: 573 KSLEELDLYGCSNLGTFPEI 592


>gi|51477387|gb|AAU04760.1| MRGH12 [Cucumis melo]
          Length = 1007

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 234/754 (31%), Positives = 362/754 (48%), Gaps = 152/754 (20%)

Query: 1   MASSSSSINMIPH---PKH--DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNR 54
           MASS+++    P    P++  DVFLSFRG D R+N  + L  AL R+ I  F DD +L R
Sbjct: 1   MASSTTTKESSPFSSSPRYIFDVFLSFRGVDTRNNITNLLYEALRRQGIIVFRDDDELER 60

Query: 55  GNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
           G  I+ +L+++I  S+ +IVI S+ YA S+WCL ELV+I++ KN + QIV+ VFY + PS
Sbjct: 61  GKAIANTLTNSIRQSRCTIVILSKRYADSKWCLRELVEIVKCKNSFNQIVLVVFYKIKPS 120

Query: 115 DAGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG----------- 163
           D    P+    GIF     E   ++   ND+ +   ++    N  ++VG           
Sbjct: 121 DVN-SPT----GIF-----EKFFVDFE-NDVKENFEEVQDWRNAMEVVGGLTPWVVNEQT 169

Query: 164 ----VESIIKE----IESQLLSGSTEFNTVG----------IWGIG-------------G 192
               V+ I+K     +   LLS     N VG          + GIG             G
Sbjct: 170 ETEEVQKIVKHAFDLLRPDLLSHDE--NLVGMNLRLKKMNMLMGIGLDDKRFIGIWGMGG 227

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH------------------- 233
           IGKTTIA A++ +++  F GS  ++N++   + V GL ++                    
Sbjct: 228 IGKTTIAKAVFKSVAREFHGSCILENVKKTLKNVRGLVSLQEKLLSDTLMRGKVQIKDGE 287

Query: 234 -LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
            +   ++ L   KV +V  D+    Q+  L G  + F  GSR+IITTRD  LL       
Sbjct: 288 GVEMIKKNLGNRKVFVVLDDVDHFSQVKDLAGGEEWFGCGSRIIITTRDEGLL---LSLG 344

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           +   + V+     ++L LF   AFG   P  G+L+L    ++YA G+PLA++ LG  L  
Sbjct: 345 IDIRYNVESFGDEEALQLFCHEAFGVKFPKKGYLDLCMPFVEYAEGLPLAIKALGHSLHN 404

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF-- 410
              + WE A+ KL    +  + + LK+SYD L  EE+ IFL  ACF KG  +  V++   
Sbjct: 405 RLFKSWEGAIRKLNNSLNRQVYENLKISYDALGKEERRIFLYIACFLKGQSKDQVIDTFV 464

Query: 411 ---LDAC---------------RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIV 452
              +DA                + +A   + +L  KSL+T+ N+KI MH+L Q++G EI 
Sbjct: 465 SFEIDAADGLLTRKKAADVLCIKETAADALKKLQEKSLITVVNDKIQMHNLHQKLGQEIF 524

Query: 453 RQESIKDPGKRSRLWHPEDIYQVL----------------NE------NT---SLPTGIN 487
           R+ES +   K SRLWH ED+   L                NE      NT   S  TG+ 
Sbjct: 525 REESSR---KSSRLWHREDMNHALRHKQGVEAIETIALDSNEHGESHLNTKFFSAMTGLK 581

Query: 488 LDSLKELYLGG-----CSNLK-------RFPEISCNIE-----DLDLKETAIEELPSSIG 530
           +  +  ++L G      S L+        F  +  + +     +L+L+ + IE       
Sbjct: 582 VLRVHNVFLSGDLEYLSSKLRLLSWHGYPFRNLPSDFQPNELLELNLQNSCIENFWRETE 641

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
            L +L  ++L+N   L      L  + +L RL L+GC++L++L   +G L+ L +L+L +
Sbjct: 642 KLDKLKVINLSNSKFLLKTPD-LSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKD 700

Query: 591 -KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            K  + I S++  L  L  L L  C RL++ PE+
Sbjct: 701 CKSLKSICSNI-SLESLKILILSGCSRLENFPEI 733



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 16/190 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
           S+ + I+L+SLK L L GCS L+ FPEI  N++   +L L  TAI +L +SIG L+ LV 
Sbjct: 706 SICSNISLESLKILILSGCSRLENFPEIVGNMKLLTELHLDGTAIRKLHASIGKLTSLVL 765

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL NC  L ++ + +  L S++ L L GC KL+++P+ +GN+  L+ L+++      IP
Sbjct: 766 LDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISCLKKLDVSGTSISHIP 825

Query: 598 SSMKQLSKLSDLRLQN-----CKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
            S++ L+ L  L  +      C  L  L   P  ++ H+     +   SN  ++      
Sbjct: 826 LSLRLLTNLKALNCKGLSRKLCHSLFPLWSTPRNNNSHSFGLRLITCFSNFHSV------ 879

Query: 653 HWDIFNFSNC 662
              + NFS+C
Sbjct: 880 --KVLNFSDC 887



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 94/192 (48%), Gaps = 41/192 (21%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRL 535
           +LP  I  L S+K L LGGCS L + P+    ISC ++ LD+  T+I  +P S   L  L
Sbjct: 776 TLPNAIGCLTSIKHLALGGCSKLDQIPDSLGNISC-LKKLDVSGTSISHIPLS---LRLL 831

Query: 536 VDLDLTNCSGLKSVSSRLC---------------------------NLKSLRRLNLSGC- 567
            +L   NC GL   S +LC                           N  S++ LN S C 
Sbjct: 832 TNLKALNCKGL---SRKLCHSLFPLWSTPRNNNSHSFGLRLITCFSNFHSVKVLNFSDCK 888

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG- 626
           L    +P+++  L SL +L+L+   F  +P+S+ QL  L  L L NC RL+SLP+ P   
Sbjct: 889 LADGDIPDDLSCLSSLHFLDLSRNLFTNLPNSLGQLINLRCLVLDNCSRLRSLPKFPVSL 948

Query: 627 SSIHARHCTSLK 638
             + AR C SLK
Sbjct: 949 LYVLARDCVSLK 960



 Score = 42.7 bits (99), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 28/162 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDL---- 540
           LD LK + L     L + P++S   N+E L L     ++EL  S+G L  L+ LDL    
Sbjct: 643 LDKLKVINLSNSKFLLKTPDLSTVPNLERLVLNGCIRLQELHLSVGILKHLIFLDLKDCK 702

Query: 541 -------------------TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
                              + CS L++    + N+K L  L+L G   + KL   IG L 
Sbjct: 703 SLKSICSNISLESLKILILSGCSRLENFPEIVGNMKLLTELHLDGT-AIRKLHASIGKLT 761

Query: 582 SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           SL  L+L   K+   +P+++  L+ +  L L  C +L  +P+
Sbjct: 762 SLVLLDLRNCKNLLTLPNAIGCLTSIKHLALGGCSKLDQIPD 803


>gi|357496097|ref|XP_003618337.1| Resistance protein [Medicago truncatula]
 gi|355493352|gb|AES74555.1| Resistance protein [Medicago truncatula]
          Length = 1205

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 186/511 (36%), Positives = 278/511 (54%), Gaps = 60/511 (11%)

Query: 26  DVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIFSEGYASSR 84
           D+R  F  +L  AL +  + TF+DD+ L RG EI+PSL  AIE S+I I +FS+ YASS 
Sbjct: 170 DIRDGFTGNLYDALRKSGVHTFMDDEELQRGGEITPSLVKAIEESRIFIPVFSKDYASSS 229

Query: 85  WCLNELVKILESKNKYGQIVVPVFYLVDPSDA-GYCPSLG-------------------W 124
           +CL+ELV I+      G+ V+PVF  +DP+       S+G                   W
Sbjct: 230 FCLDELVHIIRCSKSKGRPVLPVFCNIDPNHVRNQTGSIGEELAKHQEKFQKNMKRLREW 289

Query: 125 MGI-----------FDIPTSE--SVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI 171
                         FD+  +E  S  I+G V ++S+++ D  P    +  VG+ES + ++
Sbjct: 290 KKALKQAADLSGYHFDLAGTEYESNFIQGIVKEVSRRI-DRVPLHVTEFPVGLESQVLKV 348

Query: 172 ESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLA 230
           +S +  G  +    +GI GIGGIGKTT+A  IY+ I   F+   F+ ++R+      GL 
Sbjct: 349 KSLMDVGCHDGAQMIGIHGIGGIGKTTLAKEIYNRIYDQFDKVCFLHDVREICSTKYGLV 408

Query: 231 NIH--------------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFV 270
           ++                     + F + RL + KVL++  D+    Q+  L G L+ F 
Sbjct: 409 HLQEQLLFQTVGLNDKLGHVSEGIQFIKERLQQKKVLLILDDVDQPDQLKALAGDLNWFC 468

Query: 271 PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSN 330
            GS+VI+TTRD  LL ++    V   +EV  L+  D+L L        N   + +  +  
Sbjct: 469 GGSKVIVTTRDKHLLASYG---VEKTYEVNGLNEKDALDLLRWKVCKSNKIGSSYEGILE 525

Query: 331 IVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQN 390
              +Y++G+PLAL+V+GS L G S++EW S + + +R    +IQ++LKVS+D L +E+++
Sbjct: 526 HASRYSSGLPLALEVVGSDLSGKSKDEWSSTLARYERTVPKNIQQILKVSFDALQEEDKS 585

Query: 391 IFLDTACFFKGNDQYLVMNFLDA-CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGG 449
           +FLD ACFFKG       + LDA   +  K  I  LV KSL+ I    +T+HDL++EMG 
Sbjct: 586 LFLDIACFFKGCRLEEFQDILDAHYTYCIKNHIGVLVEKSLIKIIGGCVTLHDLIEEMGK 645

Query: 450 EIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           EIVRQES K+PGKRSRLW  EDI  VL+ N+
Sbjct: 646 EIVRQESPKEPGKRSRLWSHEDIVPVLHANS 676



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 69/100 (69%), Gaps = 1/100 (1%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           ++VFLSFRG D RH F  +L  ALC+  + TF DD+ L RG EI+ SL  AIE S+I I 
Sbjct: 19  YNVFLSFRGADTRHGFTGNLYDALCKSGVHTFKDDEELQRGGEITASLMKAIEESRIFIP 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
           +FS+ YASS +CL+ELV I+      G++V+PVFY + P+
Sbjct: 79  VFSKNYASSSFCLDELVHIIRYSKSKGRLVLPVFYDIAPT 118



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 5/124 (4%)

Query: 491 LKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGLK 547
           ++EL L    +L +  +IS   N+E L  ++ + +  + +SIG L++L  L++T CS L 
Sbjct: 810 MRELNLDHNQSLTQILDISGLLNLEILSFRDCSNLITIHNSIGFLNKLKILNVTGCSKLS 869

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLS 607
           S       L SL +L LS C  L+  PE +G+++ + Y+ L     E+ P S + LS + 
Sbjct: 870 SFPP--IKLTSLLKLELSHCNNLKSFPEILGDMKHITYIELVGTSIEQFPFSFQNLSMVH 927

Query: 608 DLRL 611
            L++
Sbjct: 928 TLQI 931



 Score = 45.8 bits (107), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 18/183 (9%)

Query: 480  TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLSRLV 536
            +S P  I L SL +L L  C+NLK FPEI  +++    ++L  T+IE+ P S  NLS + 
Sbjct: 869  SSFPP-IKLTSLLKLELSHCNNLKSFPEILGDMKHITYIELVGTSIEQFPFSFQNLSMVH 927

Query: 537  DLDLTNCS---GLKSVSSRLCNLKS------LRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
             L +        L  +++R  ++ S      ++ L+L  C           N   +E L+
Sbjct: 928  TLQIFGSGKPHNLSWINARENDIPSSTVYSNVQFLHLIECNPSNDFLRRFVN---VEVLD 984

Query: 588  LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
            L+  +   +   +K+   L  L L +CK LQ +  +P     + A  C SL T S  S L
Sbjct: 985  LSGSNLTVLSKCLKECHFLQRLCLNDCKYLQEITGIPPSLKRLSALQCNSL-TSSCRSML 1043

Query: 647  LTR 649
            L++
Sbjct: 1044 LSQ 1046


>gi|297807803|ref|XP_002871785.1| hypothetical protein ARALYDRAFT_909793 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317622|gb|EFH48044.1| hypothetical protein ARALYDRAFT_909793 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1074

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 209/688 (30%), Positives = 342/688 (49%), Gaps = 103/688 (14%)

Query: 27  VRHNFVSHLNAALCREKIET--FIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSR 84
           VR +FVSHL++AL RE I    F D   +  N+          G+++++V+FSE YA   
Sbjct: 19  VRRSFVSHLSSALHREGISVCVFADTDFDDQNQ----------GARVTVVVFSENYAFPH 68

Query: 85  WCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIF----------DIPTSE 134
             L+   KIL+ ++  G  V+PVFY VDPS     P+  W+ +           ++ +S+
Sbjct: 69  PMLDNFAKILQLRSNSGHEVIPVFYGVDPSAVN--PNHDWLPLHMEGHQSMNSSNVRSSD 126

Query: 135 SVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIG 194
           S L+E  V D+  K+    P++     +G+ + + EIE+ L   S +   +G+WG+ GIG
Sbjct: 127 SQLVEDIVRDVYGKIC---PTER----IGIYTRLMEIENLLCEQSWDVRRLGLWGMPGIG 179

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDE----------SEKVG-------GLANIH---L 234
           KTT+A A++ ++S+ ++ S F++N  ++           EK+G       G+++ +   L
Sbjct: 180 KTTLAKAVFDHMSNDYDASCFIENFDEQLRMVGPYRLLEEKIGRILEEKFGISSSYITRL 239

Query: 235 NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
           +  R +L   ++++V  D+ +    +  +GRLD F PGS +IIT+R  Q+       ++ 
Sbjct: 240 SLLRDKLCDTRIVVVLDDVRNPLAAESFLGRLDWFGPGSLIIITSRYKQVFA---LCQIS 296

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
            ++EV  L+ +++L LFS+NAF ++ P     ELS  VI YANG PLAL + G  LKG  
Sbjct: 297 QIYEVHGLNKHEALKLFSQNAFEKDVPEQNDKELSMKVIDYANGNPLALCIYGRELKG-K 355

Query: 355 EEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC 414
           + E E+A  +L++ P   IQ  LK  Y  L D E   FL+ ACFFKG +   ++  L  C
Sbjct: 356 KSEMEAAFLRLQQCPPKKIQDRLKSVYSALSDNETYTFLNIACFFKGENVDYMVQLLKWC 415

Query: 415 RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
            +  ++GI  LV K LVTIS N + M+D++Q+M  +I+  E I+   + + LWH   I  
Sbjct: 416 GYFPRVGIDVLVEKCLVTISENTLQMYDMIQDMIRDIITGEKIQ-MERCTTLWHTSHIRY 474

Query: 475 VLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED-----LDLKETAIEELPSSI 529
           +L ++             EL   G  + K  P+     ED     LD      +  P + 
Sbjct: 475 LLEDD-------------ELKADG--DPKEIPKCLMVAEDIEGICLDTSNLIFDVNPDAF 519

Query: 530 GNLSRLVDLDL-----TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
             +  L  L +      N  GL   +      + LR L+       E LP+   +L+ L 
Sbjct: 520 KKMVSLRFLKIYNSYSENVPGLNFPNGLNYLPRELRLLHWEK-YPFESLPQGF-DLQELV 577

Query: 585 YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH--------CTS 636
            LN+   + +K+  + K L  L  ++L + ++L          SIHA++        CT 
Sbjct: 578 ELNMPYSELKKLWETNKNLEMLKRIKLCHSRQLVKF-------SIHAQNIELINLQGCTR 630

Query: 637 LKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           L+  S ++ L     +H  + N S CSN
Sbjct: 631 LENFSGTTKL-----QHLRVLNLSGCSN 653



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 35/196 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI------GNLSRLVD---- 537
           L  L+ L L GCSN+  FP +  NIE+L L+ T+IEE+P SI       N   L++    
Sbjct: 640 LQHLRVLNLSGCSNITIFPGLPPNIEELYLQGTSIEEIPISILARSSQPNCEELMNHMKH 699

Query: 538 ------LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE- 590
                 +DL + + L   SS    +  L  LN+  CL+L  LP ++ +LESL+ L+L+  
Sbjct: 700 FPGLEHIDLESVTNLIKGSSYSQGVCKLVLLNMKDCLQLRSLP-DMSDLESLQVLDLSGC 758

Query: 591 ---KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSSTL 646
              ++ +  P + K+L             ++ LPE P    + +A  C  LK++      
Sbjct: 759 SRLEEIKCFPRNTKELYLAG-------TSIRELPEFPESLEVLNAHDCGLLKSVRLDFEQ 811

Query: 647 LTRSSKHWDIFNFSNC 662
           L R       + FSNC
Sbjct: 812 LPRH------YTFSNC 821



 Score = 38.9 bits (89), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP   +L+SL+ L L GCS L+       N ++L L  T+I ELP    +L     L+ 
Sbjct: 740 SLPDMSDLESLQVLDLSGCSRLEEIKCFPRNTKELYLAGTSIRELPEFPESLEV---LNA 796

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
            +C  LKSV  RL   +  R    S C +L
Sbjct: 797 HDCGLLKSV--RLDFEQLPRHYTFSNCFRL 824


>gi|113205444|gb|AAW28561.2| TMV resistance protein N, putative [Solanum demissum]
          Length = 645

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 176/535 (32%), Positives = 282/535 (52%), Gaps = 71/535 (13%)

Query: 12  PHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSK 70
           P  K+ VFLSFRG+D R  F  HL   L    I TF DDK L  G+ I   L  AIE S+
Sbjct: 15  PRWKYVVFLSFRGEDTRKTFTGHLYEGLKNRGISTFQDDKRLEHGDSIPKELLRAIEESQ 74

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPSDA------------- 116
           +++++FS+ YA+S+WCLNELVKI+E K++  GQ V+P+FY VDPS               
Sbjct: 75  VALIVFSKNYATSKWCLNELVKIMECKDEENGQTVIPIFYDVDPSHVRNQSESFGAAFAE 134

Query: 117 ----------GYCPSLGWMGIFDIPTS----------ESVLIEGNVNDISKKL-SDLFPS 155
                     G      W     +  +          ES  I+  V+ IS K  ++ +  
Sbjct: 135 HELKYKDDVEGMQKVQRWRNALTVAANLKGYDIRDGIESEHIQQIVDCISSKFRTNAYSL 194

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIG--KTTIASAIYS--------- 204
                +VG+   +++++S+L     +   +GIWGIGG+   +    + IYS         
Sbjct: 195 SFLQDVVGINDHLEKLKSKLQMEINDVRILGIWGIGGVDVKENAKKNEIYSLQNTLLSKL 254

Query: 205 ------NISSHFEGSYFMQNIRDESEKVGGLANI--------HLNFERRRLSRMKVLIVF 250
                  +++ F+G   + +I    + +  L +I        H++ ++          VF
Sbjct: 255 LRKKDDYVNNKFDGKCMIPSILCSMKVLIVLDDIDHNSKLLVHISHQKVPPVNTPPKSVF 314

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
           +  ++   ++ L G +D F  GSRVI+TTR+  L++         ++EV  L  ++++ L
Sbjct: 315 FQSSE--HLEYLAGDVDWFGNGSRVIVTTRNKHLIEKDDA-----IYEVSTLPDHEAMQL 367

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
           F+++AF +  P   F + S  V+ +A G+PLAL+V GS L       W   V ++K+  +
Sbjct: 368 FNKHAFKKEDPDESFKKFSLEVVNHAKGLPLALKVWGSLLHKKCLTLWRITVEQIKKNSN 427

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
            +I + LK+SYDGL+ EEQ IFLD ACFF+G ++  VM  L++C F A+ G++ L+ KSL
Sbjct: 428 SEIVEKLKISYDGLEPEEQEIFLDIACFFRGKERKEVMQILESCDFGAEYGLNVLINKSL 487

Query: 431 VTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT 484
           V IS  ++I MHDL+++MG  +V+ + +  P KRSR+W  ED+ +V+ + T   T
Sbjct: 488 VFISEYDRIEMHDLIEDMGRYVVKMQKL--PKKRSRIWDVEDVKKVMIDYTGTMT 540


>gi|449447549|ref|XP_004141530.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
 gi|449481488|ref|XP_004156198.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 1009

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 229/741 (30%), Positives = 354/741 (47%), Gaps = 127/741 (17%)

Query: 1   MASSS----SSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRG 55
           MASS+    SS +  P    DVFLSFRG D R N  + L  AL R+ I  F DD +L RG
Sbjct: 1   MASSTPKELSSFSSSPRFIFDVFLSFRGVDTRKNVTNRLYEALRRQGIIVFRDDDELERG 60

Query: 56  NEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
             I+ +L+++I  S+ +IVI S+ YA S+WCL ELV+I++ KN + Q+V+ VFY + PSD
Sbjct: 61  KTIANTLTNSINQSRCTIVILSKRYADSKWCLRELVEIVKCKNTFKQLVLVVFYKIKPSD 120

Query: 116 AGYCPSL--------------------GWMGIFDI-------PTSESVLIEGNVNDISKK 148
                 +                     W    ++       P +E    E  V  I K 
Sbjct: 121 VNSPTGIFEKFFVDFENDVKENFEEVQDWRKAMEVVGGLPPWPVNEQTETE-KVQKIVKH 179

Query: 149 LSDLFPSD---NKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSN 205
             DL   D   + + LVG+   +K++   +  G  +   +GIWG+GGIGKTTIA A++ +
Sbjct: 180 ACDLLRPDLLSHDENLVGMNLRLKKMNMLMGIGLDDKRFIGIWGMGGIGKTTIAKAVFKS 239

Query: 206 ISSHFEGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMK 245
           ++  F GS  ++N++   + VGGL ++                     +   ++ L   K
Sbjct: 240 VAREFHGSCILENVKKTLKNVGGLVSLQEKLLSDTLMRGKVQIKDGDGVEMIKKNLGNQK 299

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
           V +V   +    Q+  L G  + F  GSR+IITTRD  LL       V   + V+     
Sbjct: 300 VFVVLDGVDHFSQVKDLAGGEEWFGCGSRIIITTRDEGLL---LSLGVDIRYNVESFDDE 356

Query: 306 DSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           ++L LF   AFG   P  G+L+L    I+YA G+PLA++ LG  L     + WE A+ KL
Sbjct: 357 EALQLFCHEAFGVKFPKKGYLDLCMPFIEYAEGLPLAIKALGHSLHNRLFKSWEGAIRKL 416

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF-----LDAC------ 414
               +  + + LK+SYD L  EE+ IFL  ACF KG ++  V++      +DA       
Sbjct: 417 NNSLNRQVYENLKISYDALGKEERRIFLYIACFLKGQNKDQVIDTFVSFEIDAADGLLTR 476

Query: 415 ---------RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSR 465
                    + +A   + +L  KSL+T+  +KI MH+L Q++G EI  +ES +   K SR
Sbjct: 477 KNAADVLCIKETAADALKKLQEKSLITMLYDKIEMHNLHQKLGQEIFHEESSR---KGSR 533

Query: 466 LWHPEDIYQVLNENT-------------------------SLPTGINLDSLKELYLGGC- 499
           LWH ED+   L                             S  TG+ +  +  ++L G  
Sbjct: 534 LWHREDMNHALRHKQGVEAIETIVLDSKEHGESHLNAKFFSAMTGLKVLRVHNVFLSGVL 593

Query: 500 ---SNLKR--------FPEISCNIE-----DLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
              SN  R        F  +  + +     +L+L+ + IE +      L +L  ++L+N 
Sbjct: 594 EYLSNKLRLLSWHGYPFRNLPSDFKPSELLELNLQNSCIENIWRETEKLDKLKVINLSNS 653

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQ 602
             L      L  + +L RL L+GC +L++L + +G L+ L +L+L + K  + I S++  
Sbjct: 654 KFLLKTPD-LSTVPNLERLVLNGCTRLQELHQSVGTLKHLIFLDLKDCKSLKSICSNI-S 711

Query: 603 LSKLSDLRLQNCKRLQSLPEL 623
           L  L  L L  C RL++ PE+
Sbjct: 712 LESLKILILSGCSRLENFPEI 732



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 16/190 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVD 537
           S+ + I+L+SLK L L GCS L+ FPEI  N   +++L L  TAI +L  SIG L+ LV 
Sbjct: 705 SICSNISLESLKILILSGCSRLENFPEIVGNMKLVKELHLDGTAIRKLHVSIGKLTSLVL 764

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL  C  L+++ + +  L S+  L L GC KL+K+P+ +GN+  L+ L+++      IP
Sbjct: 765 LDLRYCKNLRTLPNAIGCLTSIEHLALGGCSKLDKIPDSLGNISCLKKLDVSGTSISHIP 824

Query: 598 SSMKQLSKLSDLRLQN-----CKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSK 652
            +++ L  L  L  +      C  L  L   P  ++ H+     +  L+N S++      
Sbjct: 825 FTLRLLKNLEVLNCEGLSRKLCYSLFLLWSTPRNNNSHSFGLWLITCLTNFSSV------ 878

Query: 653 HWDIFNFSNC 662
              + NFS+C
Sbjct: 879 --KVLNFSDC 886



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 41/192 (21%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRL 535
           +LP  I  L S++ L LGGCS L + P+    ISC ++ LD+  T+I  +P +   L  L
Sbjct: 775 TLPNAIGCLTSIEHLALGGCSKLDKIPDSLGNISC-LKKLDVSGTSISHIPFT---LRLL 830

Query: 536 VDLDLTNCSGLKSVSSRLC---------------------------NLKSLRRLNLSGCL 568
            +L++ NC GL   S +LC                           N  S++ LN S C 
Sbjct: 831 KNLEVLNCEGL---SRKLCYSLFLLWSTPRNNNSHSFGLWLITCLTNFSSVKVLNFSDCK 887

Query: 569 KLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG- 626
            ++  +P+++  L SL +L+L+   F  +P S+ QL  L  L L NC RL+SLP+ P   
Sbjct: 888 LVDGDIPDDLSCLSSLHFLDLSRNLFTNLPHSLSQLINLRCLVLDNCSRLRSLPKFPVSL 947

Query: 627 SSIHARHCTSLK 638
             + AR C SLK
Sbjct: 948 LYVLARDCVSLK 959



 Score = 46.6 bits (109), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 28/162 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDL---- 540
           LD LK + L     L + P++S   N+E L L   T ++EL  S+G L  L+ LDL    
Sbjct: 642 LDKLKVINLSNSKFLLKTPDLSTVPNLERLVLNGCTRLQELHQSVGTLKHLIFLDLKDCK 701

Query: 541 -------------------TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
                              + CS L++    + N+K ++ L+L G   + KL   IG L 
Sbjct: 702 SLKSICSNISLESLKILILSGCSRLENFPEIVGNMKLVKELHLDGT-AIRKLHVSIGKLT 760

Query: 582 SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           SL  L+L   K+   +P+++  L+ +  L L  C +L  +P+
Sbjct: 761 SLVLLDLRYCKNLRTLPNAIGCLTSIEHLALGGCSKLDKIPD 802


>gi|5903075|gb|AAD55633.1|AC008017_6 Similar to downy mildew resistance protein RPP5 [Arabidopsis
           thaliana]
          Length = 1258

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 223/674 (33%), Positives = 333/674 (49%), Gaps = 85/674 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MASSSSS    P  K+DVFLSFRG+D R N VSHL+  L  + + TF DDK L  G+ IS
Sbjct: 1   MASSSSS----PIWKYDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSIS 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
             +S AI+ S  ++VI SE YASS WCL+EL  +++   K    VVP+FY VDPS   + 
Sbjct: 57  EEISRAIQNSTYALVILSENYASSSWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVRHQ 116

Query: 119 -------------CPS--LGWMGI-----------FDIPTSESVLIEGNVNDISKKLSDL 152
                         P+    W              F+    E+ +IE  V DISKKL  +
Sbjct: 117 TGSFTFDKYQDSKMPNKVTTWREALTQIASLAGKDFETCEDEASMIEEIVKDISKKLLIM 176

Query: 153 FPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            P D  D +VG+ + ++ +   L +    E   +GIWG+GGIGKTTIA  ++   S  F 
Sbjct: 177 QPVDFSD-IVGMNAHMERLSPLLSMDSENEVRMIGIWGMGGIGKTTIAKCLFDQFSQGFP 235

Query: 212 GSYFMQNIRDESEKVGGLANIHLNFE-----------------------RRRLSRMKVLI 248
              F++N+     K GG++++   F                        + R    KV +
Sbjct: 236 ARCFLENVSKIYRK-GGVSSLAEKFLSTTLGLSKKKMKGSGVKLGPQEIKARFGCRKVFV 294

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  ++ D++Q+         F PGSR+IITTRD  LL N  G R   V+EVK +  + +L
Sbjct: 295 VLDNVDDMRQMHAFAQESSWFGPGSRIIITTRDKGLL-NTYGVRT--VYEVKCMDNDAAL 351

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKY-ANGVPLALQVLGSYLKGMSE-EEWESAVNKLK 366
            LF++ AF    P +   E  +I   + A G+P+A++  G + + M+  +EW+ A+ +  
Sbjct: 352 QLFNQLAFKGALPPSELYEKLSIRASWLAQGLPVAIEAYGLFFRRMTSLKEWDDALCRFI 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
             P   + ++LK+SYDGL++ ++N+FL  AC F G         LD       +G+  L 
Sbjct: 412 EAPDESVMEILKISYDGLEETDKNVFLHVACLFNGEPLRRATTLLDDGVLQGCLGLKILA 471

Query: 427 GKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG 485
            KSL+ I+ +  I MH+L+ +    IV QES++    R  LW+P +IY++L  NT     
Sbjct: 472 EKSLIEITASGYIKMHNLVDQTARAIVNQESMQRRHGRGVLWNPYEIYELLKRNTP---- 527

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
                L E+ L   SNL  F            KET ++ L  S+  L  +  L L   + 
Sbjct: 528 ---QDLVEIILHR-SNLTSF-----------WKETVVKALNRSM--LITMYLLVLNILAI 570

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
                     + +LRRL+LS    LE+LP+    +   E +    K  +KIP S+  L++
Sbjct: 571 FLFFVEYAQGMPNLRRLDLSDSENLEQLPDLSMAVNLEELITQGCKRLKKIPESISYLTR 630

Query: 606 LSDLRLQNCKRLQS 619
           L+ L +  C+ L S
Sbjct: 631 LTTLDVSYCEELAS 644



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 43/195 (22%)

Query: 501  NLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
            N+K  P+  C +   E LD      E LP ++  L RL      NC  LK++ +    L 
Sbjct: 848  NIKVIPDDVCGLKFLEKLDWSGNDFETLPETMNQLPRLKYASFRNCCRLKALPA----LV 903

Query: 558  SLRRLNLSGCLKLEKLPE------EIGNLESLE-----------------------YLNL 588
             L  + LSGC+ L+ L E      + G  + LE                       YL+L
Sbjct: 904  QLETIKLSGCINLQSLLELSYAEQDCGRFQWLELWVDGCKSIRSILDQLRHFIKLSYLDL 963

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP-CGSSIHARHCTSLKTLSNSSTLL 647
            +  +FEK+PSS++ LS L  L L  CK+L+S+  LP C  S++A  C  L+T+   S  L
Sbjct: 964  SSHEFEKLPSSIEVLSSLRTLCLNKCKKLKSIEGLPLCLKSLYAHGCEILETV---SLPL 1020

Query: 648  TRSSKHWDIFNFSNC 662
              S KH D+   S+C
Sbjct: 1021 NHSVKHLDL---SHC 1032


>gi|227438171|gb|ACP30575.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1609

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 214/669 (31%), Positives = 334/669 (49%), Gaps = 82/669 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASSS S        +DVFLSFRG+DVR  F+SH+      + IE FID+++ RG  + P
Sbjct: 241 MASSSCS------SLYDVFLSFRGEDVRKGFLSHVVKEFKSKGIEAFIDNEMERGKSVGP 294

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
           +L  AI  S+++IV+ S  YASS WCL+ELV+I++ + +  Q V+ VFY VDPSD     
Sbjct: 295 TLEKAIRQSRVAIVLLSRNYASSSWCLDELVEIMKCREEDKQRVITVFYEVDPSDVR--- 351

Query: 121 SLGWMGIFDIPTSESVLIEGNVNDIS-------KKLSDL--FPSDNKDQLVGVES-IIKE 170
               +G F     ++ +  G   +++       K+++D+  + S N     G E+ +I E
Sbjct: 352 --KQIGDFGKAFDDTCV--GRTEEVTHVWRQALKEVADIAGYASSN----CGSEADLINE 403

Query: 171 IESQLLSGSTEFNT-----------VGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           + S +++  T+  T           +GIWG  GIGKTT A  +Y  +S  F+ S F++NI
Sbjct: 404 LASNVMARVTKMKTMLSLQAKDVKVIGIWGPAGIGKTTAARVLYDQVSPEFQFSTFLENI 463

Query: 220 RDESEKVGG-------------LANI---------HLNFERRRLSRMKVLIVFYDLTDLK 257
           +   ++  G             L+ I         HL    ++LS  KVL+V  ++    
Sbjct: 464 KGCFKRSFGNDHQLKLRFQEKLLSQIFNQKDIVVRHLGGAPQKLSDQKVLVVLDEVDSWW 523

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++ +  R   F  GS VIITT D +LLK   G     ++++K  + +++L +    AFG
Sbjct: 524 QLEEVANR-AWFGRGSMVIITTEDRKLLKA-LGLEANQIYKMKFPTTDEALQILCLYAFG 581

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           Q  P   F  L+  V + A  +PL L+V+GSYL+GMS++EW  A+  L+     +I+  L
Sbjct: 582 QKFPNYDFETLAWEVTELAGNLPLGLRVMGSYLRGMSKKEWIDALPSLRSSLDSEIESTL 641

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           K+SY+ L ++E+++FL  ACFF G     V + L+    +   G+  L  +SL+   N  
Sbjct: 642 KLSYNVLSNKEKSLFLHIACFFAGFKVDRVKSILEKSDLNVNHGLQTLAYRSLIYRENGY 701

Query: 438 ITMHDLLQEMGGEI------------VRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTG 485
           + MH LLQ+MG EI            +  E IK      +         +     + P G
Sbjct: 702 VEMHSLLQQMGKEIGTGTVLGIKLLKLEGEEIKISKSAFQGIRNLQFLDIDGGTLNTPEG 761

Query: 486 INLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
           +N    K  Y+    +  RF     +   + +L +  +  E+L   I     L  +DL++
Sbjct: 762 LNCLPNKLRYIHWKQSPLRFWPSKFSEKLLVELIMPNSNFEKLWEGIKPFPCLKRMDLSS 821

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP--SS 599
              LK +   L    SL  L+L  C  L +LP  IG L +LE L+L   +  EK+   SS
Sbjct: 822 SEYLKEIPD-LSKATSLEILDLHYCRSLLELPSSIGRLINLEKLDLHYCRSLEKLSGCSS 880

Query: 600 MKQLSKLSD 608
           +K+L  LSD
Sbjct: 881 LKELD-LSD 888



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 45/203 (22%)

Query: 482  LPTGINLDS-LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            LP+ ++  S    L + G S+LK+FP++  +I +L L  T IEE+P  I NL RL  L +
Sbjct: 896  LPSSVSTWSCFYRLNMSGLSDLKKFPKVPYSIVELVLSGTGIEEVPPWIENLFRLQQLIM 955

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE-----------IGNLES------- 582
              C  L+ VS  +  L++L+ + L    K + +PE            +G  +S       
Sbjct: 956  FGCRNLEIVSPNISKLENLQTIALC---KHDDVPEMSYGDEVFTAVIVGGPDSHGIWRFR 1012

Query: 583  ----LEY----------------LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                + Y                L+L     + IP  +++LS LS+L +  C  L  LP+
Sbjct: 1013 SDLNVHYILPICLPKKALTSPISLHLFSGGLKTIPDCIRRLSGLSELSITGCIILTELPQ 1072

Query: 623  LPCGS--SIHARHCTSLKTLSNS 643
            LP GS  S+ A  C SL  +++S
Sbjct: 1073 LP-GSCLSLDAHFCRSLXRINSS 1094



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 27/152 (17%)

Query: 491 LKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLK 547
           LK + L     LK  P++S   ++E LDL    ++ ELPSSIG L  L  LDL  C  L+
Sbjct: 814 LKRMDLSSSEYLKEIPDLSKATSLEILDLHYCRSLLELPSSIGRLINLEKLDLHYCRSLE 873

Query: 548 SVS---------------------SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
            +S                     S +       RLN+SG   L+K P+      S+  L
Sbjct: 874 KLSGCSSLKELDLSDSGIGALELPSSVSTWSCFYRLNMSGLSDLKKFPKVP---YSIVEL 930

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
            L+    E++P  ++ L +L  L +  C+ L+
Sbjct: 931 VLSGTGIEEVPPWIENLFRLQQLIMFGCRNLE 962


>gi|358343944|ref|XP_003636055.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355501990|gb|AES83193.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1250

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 182/523 (34%), Positives = 286/523 (54%), Gaps = 55/523 (10%)

Query: 169 KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG- 227
           + I+S +   STE   +G+WG+GGIGKTT+A+A++  +S  ++GS F + + + S+  G 
Sbjct: 206 RSIQSLIKFDSTEVQIIGVWGMGGIGKTTLATAMFQRVSFKYDGSCFFEKVTEVSKSRGI 265

Query: 228 ---------GLANIHLNFE---------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGF 269
                     L    L+ +         RRRL  MK  IV  D+ + + +  LIG   G+
Sbjct: 266 NYTCNKLLSKLLKEDLDIDTPKLISSMIRRRLKSMKSFIVLDDVHNSELLQNLIGVGHGW 325

Query: 270 V-PGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
           +  GS VI+TTRD  +L +     +  ++EVK+++  +SL LF  NAF +  P  G++EL
Sbjct: 326 LGSGSTVIVTTRDKHVLIS---GGIKTIYEVKKMNSRNSLRLFCLNAFNKVSPKDGYVEL 382

Query: 329 SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
           S   I YA G PLALQVLGS L   +E+EW+ A  KL+++P+ +I  + ++S++ LD  E
Sbjct: 383 SKRAIDYARGNPLALQVLGSLLSCKNEKEWDCASAKLRKIPNNEIDSIFRLSFNELDKTE 442

Query: 389 QNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEM 447
           QNIFLD A  FKG ++  +   L+ C F A IGISRL+ K+LVT+ S N I MH L+QEM
Sbjct: 443 QNIFLDIAFVFKGQERNSITKILNECGFFADIGISRLLDKALVTVDSENCIQMHGLIQEM 502

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKELYLG-------G 498
           G +IVR+ES+K+PG+RSRL  PE++Y VL  N  +     I LD+ + +++         
Sbjct: 503 GKQIVREESLKNPGQRSRLCDPEEVYDVLKNNRGSEKVEAIYLDATESIHVNLRPDAFEN 562

Query: 499 CSNLK-------------RFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
             NL+             RFP     +  N+  L      ++ +P +  +L  LV+L L 
Sbjct: 563 MENLRLLAFQDREGVTSIRFPHGLGLLPKNLRFLRWDGYPLKTVPLT-SSLEMLVELSLK 621

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
             S ++ + + + NL +L  ++L+G  KL + P   G+    E +    +   ++ SS+ 
Sbjct: 622 Q-SHVEKLWNGVVNLPNLEIIDLNGSKKLIECPNVSGSPNLKEVILRECESMPEVDSSIF 680

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSLKTLS 641
            L KL  L +  C  L+SL    C  ++    + +C +LK  S
Sbjct: 681 HLQKLERLNVCGCTSLKSLSSNTCSPALRHFSSVYCINLKEFS 723



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 48/235 (20%)

Query: 475 VLNENTSLP----TGINLDSLKELYLGGCSNLKRFPEISCN--------IEDLDLKETAI 522
           +L E  S+P    +  +L  L+ L + GC++LK     +C+        +  ++LKE ++
Sbjct: 665 ILRECESMPEVDSSIFHLQKLERLNVCGCTSLKSLSSNTCSPALRHFSSVYCINLKEFSV 724

Query: 523 ----------------EELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN----------- 555
                            ELPSSI +   L +   +    L  +    C+           
Sbjct: 725 PLTSVHLHGLYTEWYGNELPSSILHAQNLKNFGFSISDCLVDLPENFCDSFYLIKILSSG 784

Query: 556 --LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
              ++++ L +     L ++P+ I  L SL  L L     + +P S+K L +L  + +  
Sbjct: 785 PAFRTVKELIIVEIPILYEIPDSISLLSSLVILRLLCMAIKSLPESLKYLPQLRLVHVSK 844

Query: 614 CKRLQSLPEL----PCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           CK LQS+P L    P   ++    C SL+ + +S+  L      + I    NC N
Sbjct: 845 CKLLQSIPALYRFIP---NLSVWDCESLEEVLSSTGELYDKPSLYYIVVLINCQN 896


>gi|227438235|gb|ACP30607.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1128

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 221/728 (30%), Positives = 327/728 (44%), Gaps = 143/728 (19%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF++FRGK +R+ FVSHL  AL ++ I  FID    +G ++S  L S IE S+I++ I
Sbjct: 15  HQVFINFRGKQLRNGFVSHLEKALRKDGINVFIDKNETKGKDLS-ILFSRIEESRIALAI 73

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----GYCPSLGWM------ 125
           FS  Y  S WCLNEL KI E  +    +V+P+FY V+  D     G      W       
Sbjct: 74  FSTLYTESNWCLNELEKIKECVDLGKLVVIPIFYKVETDDVKNLKGVFGDKFWELAKTCR 133

Query: 126 ---------GIFDIP----------TSESVLIEGNVNDISKKLSDLFPSDNKD------- 159
                     + D+P          + E   I   V  + K LSD+     +D       
Sbjct: 134 GEKLDKWKEALEDVPKKLGFTLSEMSDEGEYISKIVGQVMKVLSDVSAGLERDVPIEDPS 193

Query: 160 -------QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
                   L G+E+ +K++E +L        TVG+ G+ GIGKTT+   +Y      F  
Sbjct: 194 EADPDSSPLYGIETRLKQLEEKLEFDCESTLTVGVVGMPGIGKTTLTKMLYEKWQHKFLR 253

Query: 213 SYFMQNIR---------------------DESEKVGGLANIHLNFERRRLSRMKVLIVFY 251
             F+ ++R                     D S++V   A++     +  L   K L+V  
Sbjct: 254 CVFLHDVRKLWQDRMMDRNIFMRELLKDDDLSQQVA--ADLSPESLKALLLSKKSLVVLD 311

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           ++TD KQI++L+G  D    GS + ITT D  +++     +V   +EV  LS  +S   F
Sbjct: 312 NVTDKKQIEVLLGECDWIKKGSLIFITTSDKSVIE----GKVDDTYEVLRLSGRESFQYF 367

Query: 312 SRNAFGQNH----PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR 367
           S  AFG       P   F+ LS +   YA G PLAL++LG  L G  E  WE  ++KL +
Sbjct: 368 SYFAFGGGKHYYTPKGNFMNLSRLFADYAKGNPLALKILGVELNGKDETHWEDKLSKLAQ 427

Query: 368 MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
            P   IQ VL++SYDGL +  +N+FLD ACFF+  D+Y V   +++C       I  L  
Sbjct: 428 SPDKTIQNVLQISYDGLSELHKNVFLDVACFFRSGDEYYVKCLVESCDSE----IKDLAS 483

Query: 428 KSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--G 485
           K  + IS  ++ MHDLL   G E+  Q S        RLW+ + +   L +     +  G
Sbjct: 484 KFFINISGGRVEMHDLLYTFGKELGLQGS-------RRLWNHKGVVGALKKRAGAESVRG 536

Query: 486 INLD--------SLKELYLGGCSNLK----------RFPEISC----------------- 510
           I LD         L++    G  NL+          R  E  C                 
Sbjct: 537 IFLDMSELKKKLPLEKCTFSGMRNLRYLKFYNSCCHRECEADCKLSFPEGLEFPLDEVRY 596

Query: 511 ------------------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
                             N+ DL L  + IEE+   +    +L  +DL++ S L  +S  
Sbjct: 597 LYWLKFPLKKLPKDFNPKNLTDLSLPYSEIEEIWEGVKATPKLKWVDLSHSSKLSKLSG- 655

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
           L N +SL+RL+L GC  L++LP E+ +++SL +LN+      +    M  +S +  L L 
Sbjct: 656 LQNAESLQRLSLEGCKSLQELPREMNHMKSLVFLNMRGCTSLRFLPHMNLIS-MKTLILT 714

Query: 613 NCKRLQSL 620
           NC  LQ  
Sbjct: 715 NCSSLQEF 722



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 105/214 (49%), Gaps = 35/214 (16%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +NL S+K L L  CS+L+ F  IS N+E L L  TAI +LP+++  L RL+ L+L +C  
Sbjct: 703 MNLISMKTLILTNCSSLQEFRVISDNLETLKLDGTAISQLPANMVKLQRLMVLNLKDCIM 762

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP-------- 597
           L++V   L  LK L+ L LSGC KL+  P  I N++ L+ L L       +P        
Sbjct: 763 LEAVPESLGKLKKLQELVLSGCSKLKTFPIPIENMKRLQILLLDTTAITDMPKILQFNSQ 822

Query: 598 --------SSMKQL---------------SKLSDLRL---QNCKRLQSLPELPCGSSIHA 631
                   SS++ L               S+L  LRL   + CK L S+P LP    +  
Sbjct: 823 IKCGMNGLSSLRHLCLSRNNMITNLQVNISQLHHLRLLDVKYCKNLTSIPLLPPNLEVLD 882

Query: 632 RH-CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
            H C  LKT++    LL    +    F F+NC+N
Sbjct: 883 AHGCEKLKTVATPLALLKLMEQVHSKFIFTNCNN 916


>gi|10177589|dbj|BAB10820.1| disease resistance protein-like [Arabidopsis thaliana]
          Length = 1298

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 224/719 (31%), Positives = 332/719 (46%), Gaps = 122/719 (16%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSF GKDVR  F SH    L R+ I  F D+++ R + + P L  AI+ S+I++V+
Sbjct: 50  YDVFLSFSGKDVRVTFRSHFLKELDRKLISAFRDNEIERSHSLWPDLEQAIKDSRIAVVV 109

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMG-IFDIPTS- 133
           FS+ YASS WCLNEL++I+   +K   I++PVFY VDPS   Y   +G  G IF+     
Sbjct: 110 FSKNYASSSWCLNELLEIVNCNDK---IIIPVFYGVDPSQVRY--QIGEFGSIFEKTCKR 164

Query: 134 -----------------------------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                                        E+ +IE   ND+  KL     +D+ +  +G+
Sbjct: 165 QTEEVKNQWKKALTDVANMLGFDSAKWDDEAKMIEEIANDVLAKLLLTSSTDSAENSIGI 224

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ------- 217
           E  I  +   L   + E   VGIWG  GIGKTTIA A+++ +S HF  S F+        
Sbjct: 225 EDHIANMSVLLKLEAEEVRMVGIWGSSGIGKTTIARALFNQLSRHFPVSKFIDRAFVYKS 284

Query: 218 -------NIRDESEKVG----------GLANI---HLNFERRRLSRMKVLIVFYDLTDLK 257
                  N  D + K+           G  +I   HL     RL   K LI+  DL DL 
Sbjct: 285 RETYKGANPDDPNMKLHLQGCFLSEILGKKDIKIDHLGALGERLKHQKTLIIIDDLDDLV 344

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
            +D L+G+ + F  GSR+I+ T + Q L+ H    + H++EV   S   +  +F ++AFG
Sbjct: 345 VLDSLVGKTNWFGCGSRIIVITNNKQFLRAHG---IDHIYEVSLPSKERAQEMFCQSAFG 401

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           +N P  GF EL   +   A  +PL L V GS L+G  +E W   + +L+     +I++ L
Sbjct: 402 ENSPPEGFEELVVEIAWLAGSLPLGLTVFGSALRGRKKEYWVKMLPRLQNDLDGNIEETL 461

Query: 378 KVSYDGLDD-EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN 436
           KVSYD + + ++Q +F   AC F       +   L        I +  LV KSL+ + N+
Sbjct: 462 KVSYDAIGNVKDQALFRLIACLFNHVKVRDIELLLADSGLDVNIALENLVDKSLIHVRND 521

Query: 437 KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--NTSLPTGINLDSLK-- 492
            + MH LLQE G  IVR +S  +PG+R  L    D   VL+E   T    GI+LD+ K  
Sbjct: 522 HVEMHRLLQETGRNIVRSQSTDNPGEREFLVDSNDSRTVLSEGIGTRKVLGISLDTSKVS 581

Query: 493 -----ELYLGGCSNL-----------------------------------KRFPEISC-- 510
                E    G  NL                                    RFP + C  
Sbjct: 582 EFCVHENAFKGMGNLLFLDISSKTFIEEEVKVHLPEKINYYSVQPKQLIWDRFP-LKCMP 640

Query: 511 -----NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
                N+  L++ ++ +E+L     + + L +LD+     LK +   L    ++ +L+  
Sbjct: 641 YTFLRNLVKLEMHDSKLEKLWEGAMSFTCLKELDMWASKYLKEIPD-LSKATNIEKLDFG 699

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            C  L +LP  I NL  L  LN+    + E +P+    L  L  L    C +L++ PE 
Sbjct: 700 HCWSLVELPSSIRNLNKLLELNMEYCGELETLPTGF-NLKSLDYLNFNECWKLRTFPEF 757



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 58/93 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLPTGINL+SL  L L GCS LKRFP+IS NI+ LDL +T IEE+P  I N   L  L +
Sbjct: 849 SLPTGINLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLTKLTM 908

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             C  LK VS  +  LK L  ++ S C  L ++
Sbjct: 909 KGCRELKCVSLNIFKLKHLGEVSFSNCGALTRV 941



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 50/189 (26%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI--GNLSRL--- 535
           +LPTG NL SL  L    C  L+ FPE + NI +L L ET+IEE PS++   N+  L   
Sbjct: 730 TLPTGFNLKSLDYLNFNECWKLRTFPEFATNISNLILAETSIEEYPSNLYFKNVRELSMG 789

Query: 536 -VDLDLTNCSGLK----------------------SVSSRLCNLKSLRRLNLSGCLKLEK 572
             D D   C G+K                       +SS   NL +L RL++  C  LE 
Sbjct: 790 KADSDENKCQGVKPFMPMLSPTLTLLELWNIPNLVELSSSFQNLNNLERLDICYCRNLES 849

Query: 573 LPEEIGNLESL---------------------EYLNLAEKDFEKIPSSMKQLSKLSDLRL 611
           LP  I NLESL                     +YL+L +   E++P  ++    L+ L +
Sbjct: 850 LPTGI-NLESLVSLNLFGCSRLKRFPDISTNIKYLDLDQTGIEEVPWQIENFFNLTKLTM 908

Query: 612 QNCKRLQSL 620
           + C+ L+ +
Sbjct: 909 KGCRELKCV 917


>gi|255563216|ref|XP_002522611.1| hypothetical protein RCOM_0884400 [Ricinus communis]
 gi|223538087|gb|EEF39698.1| hypothetical protein RCOM_0884400 [Ricinus communis]
          Length = 369

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 145/322 (45%), Positives = 203/322 (63%), Gaps = 25/322 (7%)

Query: 179 STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK------------- 225
           S +   +GIW +GGIGKTT+A  I+  ISS F  SYF QN+R++ EK             
Sbjct: 6   SKDVRILGIWEMGGIGKTTLARKIFKRISSQFHSSYFGQNVREKLEKSTLDSLQHEILSE 65

Query: 226 --------VGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVII 277
                   +G   NI  +F R+ + R KVLIV  D+ D +QID L+   D + PGS +II
Sbjct: 66  LLGKEYSDLGMPINISSSFIRKWIMRKKVLIVLDDVNDSEQIDFLVRPRDIYGPGSIIII 125

Query: 278 TTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYAN 337
           T+RD Q+L N+  +   +++EVKEL+ +D+L LF  +AF  N PA   +E++ + ++Y  
Sbjct: 126 TSRDKQIL-NYGNA---NIYEVKELNSDDALKLFILHAFKGNPPAEALMEVARMAVEYGR 181

Query: 338 GVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTAC 397
           G PLAL+VLGS L   S EE    + KL+ +    +Q +L++S+D LDD+E+ IFLD AC
Sbjct: 182 GNPLALKVLGSTLYDKSIEECRDHLRKLENISDKKLQNILRISFDDLDDDEKEIFLDIAC 241

Query: 398 FFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESI 457
           FFK  D+  V + L +   SA IGI  L  KSL+T+SN +I MHDLLQ+MG +IVRQE I
Sbjct: 242 FFKWEDKNEVESILSSFGRSAIIGIRVLQDKSLITVSNKQIEMHDLLQQMGRDIVRQECI 301

Query: 458 KDPGKRSRLWHPEDIYQVLNEN 479
           K+P  RSRLW P+DIY+VL ++
Sbjct: 302 KNPEYRSRLWIPQDIYRVLTKD 323


>gi|357499697|ref|XP_003620137.1| Resistance protein [Medicago truncatula]
 gi|355495152|gb|AES76355.1| Resistance protein [Medicago truncatula]
          Length = 1257

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 235/732 (32%), Positives = 367/732 (50%), Gaps = 117/732 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+ F  +L  AL  + + TF+DD+ L +G EI+PSL  AIE S ++IV
Sbjct: 10  YDVFLSFRGEDTRYGFTGNLWKALHDKGVRTFMDDEELQKGEEITPSLIKAIENSNMAIV 69

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSLG------ 123
           + S+ YASS +CL EL KILE     G  V+PVFY VDPSD       Y  ++       
Sbjct: 70  VLSKNYASSSFCLKELSKILE----VGLFVLPVFYKVDPSDVRKLEKSYGEAMDKHKASS 125

Query: 124 ----W-MGIFDIPTSESVLI---EGNVNDISKKLSDLFPSDNK-------DQLVGVESII 168
               W M +  +           +G  ++   K+ +    + K       D LVG+E   
Sbjct: 126 NLDKWKMSLHQVANLSGFHYKKRDGYEHEFIGKIVEQVLRNIKPVALPIGDYLVGLEHQK 185

Query: 169 KEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG 227
           + + S L  GS +  + VGI GIGGIGKTT+A  +Y++I   F+GS F++ +R+ S+K G
Sbjct: 186 QHVTSLLNVGSDDAIHMVGIHGIGGIGKTTLALEVYNSIVCQFQGSCFLEKVRENSDKNG 245

Query: 228 -------------GLANIHL-------NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLD 267
                        G  NI L       +  R+RL + K+L++  D+ +L+Q++ + GR  
Sbjct: 246 LIYLQKILLSQIFGEKNIELTSVGQGISMLRQRLHQKKILLLLDDVDNLEQLEAIAGRSV 305

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA---- 323
            F PGSRVIITTRD +LL  H    +   +EV  L+  D+  L    A    +  +    
Sbjct: 306 WFGPGSRVIITTRDKRLLTRHE---IEITYEVNGLNDEDAFDLIRWKALKNKYSPSYKDI 362

Query: 324 -------------------GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
                              G++ +    + YA+G+PLAL+V+GS+    + EE + A+++
Sbjct: 363 LFVTKYGRELMDMNDKVFSGYVHVLKRAVAYASGLPLALEVIGSHFFNKTIEECKCALDR 422

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFS-AKIGIS 423
            +R+P   IQ  L++S++ L +EE+++FLD AC FKG     V   L A      K  I+
Sbjct: 423 YERVPDKKIQTTLQLSFNALQEEEKSVFLDIACCFKGWKLKRVEEILHAHHGDIMKDHIN 482

Query: 424 RLVGKSLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
            LV KSL+ +S +  +T+HDL+++MG EIVRQES ++PGKRSRLW  +DI +VL ENT  
Sbjct: 483 ALVEKSLIKVSESGNLTLHDLVEDMGKEIVRQESPENPGKRSRLWSSKDIIRVLEENTV- 541

Query: 483 PTGINLDSL-----KELYLGGCSNLKRFPEISCNIEDLDL----KETAIEELPSSIGNLS 533
            +  ++D L     + +Y      ++   E    +E+L       +    + P  + N  
Sbjct: 542 -SNNDMDDLGTSKIEIIYFDRWIRVEWDGEAFKKMENLKTLIFSNDVFFSKNPKHLPNSL 600

Query: 534 RLVDLDL----------------------TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE 571
           R+++                         +N    K   ++    +++R LNL     L 
Sbjct: 601 RVLECRYHKYHSSDFHVHDDRCHFFIHPPSNPFEWKGFFTKASKFENMRVLNLDHSEGLA 660

Query: 572 KLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--S 628
           ++P  I  L +LE  ++   +    I  S+  L KL   R+ +C  ++S+P L   S   
Sbjct: 661 EIP-NISGLPNLEEFSIQNGEKVIAIDKSIGFLGKLKIFRIISCAEIRSVPPLSLASLEE 719

Query: 629 IHARHCTSLKTL 640
           I   HC SL++ 
Sbjct: 720 IEFSHCYSLESF 731



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 42/208 (20%)

Query: 472 IYQVLN--ENTSLPTGINLDSLKELYLGGCSNLKRFP-EISCNIEDLDLKE----TAIEE 524
           I+++++  E  S+P  ++L SL+E+    C +L+ FP  ++  +  L +      T I+ 
Sbjct: 697 IFRIISCAEIRSVPP-LSLASLEEIEFSHCYSLESFPLMVNRFLGKLKILRVINCTKIKI 755

Query: 525 LPSSIGNLSRLVDLDLTNCSG--------------LKSVSSRLC---------NLKSLRR 561
           +PS I  L  L +LDL++C+G              LK++S R C          L SL  
Sbjct: 756 IPSLI--LPSLEELDLSDCTGLESFPPLVDGFGDKLKTMSVRGCINIRSIPTLMLASLEE 813

Query: 562 LNLSGCLKLEKLP-EEIG----NLESLEYLNLAE-KDFEKIPSSMKQ-LSKLSDLRLQNC 614
           L+LS C+ LE  P  E G     L+SLE L+L+   + E  P  +   L KL  L + +C
Sbjct: 814 LDLSDCISLESFPIVEDGIPPLMLDSLETLDLSNCYNLESFPLVVDGFLGKLKTLLVGSC 873

Query: 615 KRLQSLPELPCGS--SIHARHCTSLKTL 640
            +L+S+P L   S   +   +C SL++ 
Sbjct: 874 HKLRSIPPLKLDSLEKLDLSYCCSLESF 901



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 32/158 (20%)

Query: 488 LDSLKELYLGGCSNLKRFPEI--------------SCN------------IEDLDLKETA 521
           LDSL+ L L  C NL+ FP +              SC+            +E LDL    
Sbjct: 837 LDSLETLDLSNCYNLESFPLVVDGFLGKLKTLLVGSCHKLRSIPPLKLDSLEKLDLSYCC 896

Query: 522 IEELPSSI--GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC--LKLEKLPEEI 577
             E   S+  G L +L  L++  C  L+++      L SL   NLS C  L LE  P+ +
Sbjct: 897 SLESFLSVEDGLLDKLKFLNIECCVMLRNIP--WLKLTSLEHFNLSCCYSLDLESFPDIL 954

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           G + ++  L L E   E++P   + L++L      NC+
Sbjct: 955 GEMRNIPGLLLDETTIEELPFPFQNLTQLQTFHPCNCE 992



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 39/206 (18%)

Query: 486  INLDSLKELYLGGCS--NLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            + L SL+   L  C   +L+ FP+I     NI  L L ET IEELP    NL++L     
Sbjct: 929  LKLTSLEHFNLSCCYSLDLESFPDILGEMRNIPGLLLDETTIEELPFPFQNLTQLQTFHP 988

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSG-------------------------CLKLEKLPE 575
             NC  +  V S +  L     +N                            C++  KL +
Sbjct: 989  CNCEYV-YVPSSMSKLAEFTIMNERMSKVAEFTIQNEEKVYAIQSAHVKYICIRDCKLSD 1047

Query: 576  EIGNLESLEYLNLAEK-----DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELPCGSSI 629
            E  +L  + + N+ E       F  +P S+++   L  L L +CK LQ +    P    +
Sbjct: 1048 EYLSLNLMLFANVKELHLTNIQFTVLPKSIEKCHFLWKLVLDDCKDLQEIKGNPPSLKML 1107

Query: 630  HARHCTSLKTLSNSSTLLTRSSKHWD 655
             A +C SL   S+  ++L +   H D
Sbjct: 1108 SALNCISLT--SSCKSILVKQELHED 1131


>gi|356514994|ref|XP_003526186.1| PREDICTED: uncharacterized protein LOC100785853 [Glycine max]
          Length = 1079

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 183/516 (35%), Positives = 279/516 (54%), Gaps = 61/516 (11%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
            +DVFLSFRG D  H F  +L  AL    I TFID+ L RG EI+P +  AIE S+I+I++
Sbjct: 553  YDVFLSFRGSDTLHGFTGYLYKALHDRGIHTFIDEDLKRGEEITPEIVKAIEESRIAIIV 612

Query: 76   FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---AGYCPSLGWMG------ 126
             S  YASS +CL+EL  IL+   +   +V+PVFY VD        Y  +L   G      
Sbjct: 613  LSINYASSSFCLDELATILDCLERKRLLVLPVFYNVDHYQVLGGSYVEALVKHGKSLKHS 672

Query: 127  IFDIPTSESVLIE-GNVNDISKKLSDLFPSDNKDQLV--------------GVESIIKEI 171
            +  +   E  L E  +++D   K    +  D   ++V              G+ S + E+
Sbjct: 673  MEKLEKWEMALYEVADLSDFKIKHGARYEYDFIGEIVEWVSSKINPAHYPVGLGSKVLEV 732

Query: 172  ESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSN-ISSHFEGSYFMQNIRDESEKVG-- 227
               L  G  +  + +GI GI G+GK+T+A  +Y+  IS HF+ S F++N+R++S+K G  
Sbjct: 733  RKLLDVGRDDGVHMLGIHGIDGVGKSTLAREVYNKLISDHFDASCFIENVREKSKKHGLH 792

Query: 228  GLANIHLN-------------------FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
             L NI L+                    +R RL + KVL+V  D+   +Q+  + G+   
Sbjct: 793  HLQNILLSKILGEKDINLTSAQQEISMMQRHRLQQKKVLMVLDDVDRPEQLQAVTGKPAW 852

Query: 269  FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLEL 328
            F PGS+VIITT+D QLL ++  +R    +EVK+L+ +D+L L    AF  ++    +  L
Sbjct: 853  FGPGSKVIITTQDKQLLTSYDINRT---YEVKKLNKDDALQLLKWKAFKMHYFDPRYKML 909

Query: 329  SNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEE 388
             N  + +A+ +PL L++L SYL G S +EW+   ++  R P+  ++ +LKV +D L ++E
Sbjct: 910  LNRAVTFASSLPLTLEILASYLFGKSVKEWKFTFHQFVRSPNNPMEMILKVIFDSLKEKE 969

Query: 389  QNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGKSLVTIS------NNKITMH 441
            +++ LD AC+FKG +   V + L A      K  I  LV KSLV I+      N+ ITMH
Sbjct: 970  KSVLLDIACYFKGYELTEVQDILHAHYGQCMKYYIDVLVDKSLVYITHGTEPCNDTITMH 1029

Query: 442  DLLQEMGGEIVRQES-IKDPGKRSRLWHPEDIYQVL 476
            +L+ +   EIVR ES +  PG+  RLW  ED+ +V 
Sbjct: 1030 ELIAK---EIVRLESMMTKPGECRRLWSWEDVREVF 1062



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 72/115 (62%), Gaps = 8/115 (6%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           + SSSS  N       DVFLSFRG+D R++F  +L  AL    I TF+DD +L RG+EI+
Sbjct: 349 VPSSSSFTN-------DVFLSFRGEDTRYSFTGNLCRALRDSGIHTFVDDDELQRGDEIT 401

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
             L   IE S+  I++ S+ YASS +CLN L  ILE   +   +V+P+FY VDPS
Sbjct: 402 SELEKEIEDSRFFIIVLSQNYASSSFCLNVLAYILECVKRKRLLVLPIFYKVDPS 456



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 2/82 (2%)

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           C+ ++ +         +R L+LS C  L K+P+  GNL  LE ++L+  +FE +PS +K+
Sbjct: 163 CNPVRCLFPSFSIFSCIRELDLSFC-NLLKIPDAFGNLHCLERISLSGNNFETLPS-LKE 220

Query: 603 LSKLSDLRLQNCKRLQSLPELP 624
           LSKL  L L++CKRL+ LPELP
Sbjct: 221 LSKLLRLDLRHCKRLKYLPELP 242



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 272 GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNI 331
           GSR++I  +D QLL+ H    V HV+ V+ L+ + ++ LF +NAF  ++  + +  L++ 
Sbjct: 55  GSRIVIICKDEQLLRTHE---VYHVYRVQPLNRHIAVQLFCKNAFKCDYIMSDYETLTHD 111

Query: 332 VIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           V+ +A G PLA++V+   L   +  +W   + +L
Sbjct: 112 VLSHAQGHPLAIEVISKSLHCRNVSQWRGRLVRL 145


>gi|30696080|ref|NP_199976.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332008725|gb|AED96108.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1175

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 209/657 (31%), Positives = 312/657 (47%), Gaps = 113/657 (17%)

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-------------- 116
           ISIV+FS+ YASS WCLNELV+I +   +  QIV+P+FY VDPSD               
Sbjct: 2   ISIVVFSKKYASSTWCLNELVEIHKCYKELTQIVIPIFYEVDPSDVRKQTREFGEFFKVT 61

Query: 117 --GYCPSLG--WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
             G    +   W+   +   S           E+ +IE    D+  KL     S+    L
Sbjct: 62  CVGKTEDVKQQWIEALEEVASIAGHDSKNWPNEANMIEHIAKDVLNKLIATSSSNCFGDL 121

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+E+ +K ++S L   S E   VGI G  GIGKTTIA  +YS +SS F+   F    R 
Sbjct: 122 VGIEAHLKAVKSILCLESEEARMVGILGPSGIGKTTIARILYSKLSSQFDYHVFGSFKRT 181

Query: 222 ESEKVG-----------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIG 264
             +  G                  L    L   ++RL   KVLIV  D+ +L+ +  L+G
Sbjct: 182 NQDNYGMKLSWEEQFLSEILDQKDLKISQLGVVKQRLKHKKVLIVLDDVDNLELLKTLVG 241

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
           +   F PGSR+I+TT+D  LLK+H+   + H++EV   S   +L +  R+AF +N P  G
Sbjct: 242 QTGWFGPGSRIIVTTQDRILLKSHK---IDHIYEVGYPSRKLALRILCRSAFDRNSPPDG 298

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR-MPHMDIQKVLKVSYDG 383
           F++L+N V +    +PLAL ++GS LKG  +EEW   +  L+  +   +I K L+VSYD 
Sbjct: 299 FMQLANEVTELVGNLPLALNIMGSSLKGRDKEEWIEMMPSLRNSLVDGEILKTLRVSYDR 358

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS--NNKITMH 441
           L    Q IFL  AC         +++ L     +A IG+  L  KSL+ IS  +  + MH
Sbjct: 359 LHGNYQEIFLYIACLLNCCGVEYIISMLGD---NAIIGLKILAEKSLIHISPLDKTVEMH 415

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLK------- 492
            LLQ++G +IVR ES  +PGKR  L   EDI  V  +NT   T  GI+L++L+       
Sbjct: 416 SLLQKLGRKIVRDESFGNPGKRRFLLDAEDICDVFTDNTGTETVLGISLNTLEINGTLSV 475

Query: 493 -ELYLGGCSNLK------------------------------------RFPEISC----- 510
            +    G  NL+                                    +FP + C     
Sbjct: 476 DDKSFQGMHNLQFLKVFENWRRGSGEGILSLPQGLNSLPRKLRLLHWYKFP-LRCMPSNF 534

Query: 511 ---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
               + +L++  + +E L      L  L  +DL+    LK +   L    +L  ++L  C
Sbjct: 535 KAEYLVNLEMAYSQLERLWEGTQQLGSLKKMDLSKSENLKEIPD-LSYAVNLEEMDLCSC 593

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             L  LP  + NL+ L  L ++   + E +P+ +  L  L  L L++C +L+S P++
Sbjct: 594 KSLVTLPSSVRNLDKLRVLRMSSCSNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQI 649



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT +NL+SL  L L GCS L  FP+IS NIE L L +TAIEE+PS I +   L  L +
Sbjct: 782 ALPTDVNLESLHTLDLSGCSKLTTFPKISRNIERLLLDDTAIEEVPSWIDDFFELTTLSM 841

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
             C  L+++S+ +C LK +   N S C +L + 
Sbjct: 842 KGCKRLRNISTSICELKCIEVANFSDCERLTEF 874



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 28/158 (17%)

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           DL L E  ++E P+ +  ++ L  LDL  C  L +V S + +L  L  LN+  C  LE L
Sbjct: 726 DLSLSE-KLKEFPN-LSKVTNLDTLDLYGCKSLVTVPSSIQSLSKLTELNMRRCTGLEAL 783

Query: 574 PEEIGNLESLEYLNLA---------------------EKDFEKIPSSMKQLSKLSDLRLQ 612
           P ++ NLESL  L+L+                     +   E++PS +    +L+ L ++
Sbjct: 784 PTDV-NLESLHTLDLSGCSKLTTFPKISRNIERLLLDDTAIEEVPSWIDDFFELTTLSMK 842

Query: 613 NCKRLQ----SLPELPCGSSIHARHCTSLKTLSNSSTL 646
            CKRL+    S+ EL C    +   C  L    ++S +
Sbjct: 843 GCKRLRNISTSICELKCIEVANFSDCERLTEFDDASMV 880



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 25/140 (17%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNC 543
            L SLK++ L    NLK  P++S   N+E++DL    ++  LPSS+ NL +L  L +++C
Sbjct: 558 QLGSLKKMDLSKSENLKEIPDLSYAVNLEEMDLCSCKSLVTLPSSVRNLDKLRVLRMSSC 617

Query: 544 SGLKSVSSRLCNLKSLRRL---------------------NLSGCLKLEKLPEEIGNLES 582
           S ++ + + L NL+SL  L                     NLSG    E+    I N+  
Sbjct: 618 SNVEVLPTDL-NLESLDLLNLEDCSQLRSFPQISRNISILNLSGTAIDEESSLWIENMSR 676

Query: 583 LEYLNLAEKDFEKIPSSMKQ 602
           L +L       + +PS+ +Q
Sbjct: 677 LTHLRWDFCPLKSLPSNFRQ 696


>gi|356514859|ref|XP_003526120.1| PREDICTED: TMV resistance protein N-like, partial [Glycine max]
          Length = 1146

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 178/522 (34%), Positives = 266/522 (50%), Gaps = 61/522 (11%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           ++DVF+SFRG+D R++F   L  AL +E IE F DDK + +G  I+P L  AIEGS + +
Sbjct: 24  EYDVFVSFRGEDTRNSFTGFLLQALKKEGIEAFKDDKDIRKGESIAPELIRAIEGSHVFL 83

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSLG----- 123
           V+FS+ YASS WCL EL  I        + ++P+FY VDPS        Y  +       
Sbjct: 84  VVFSKDYASSTWCLRELAHIRNCIQTSPRHLLPIFYDVDPSQVRKQSGDYQKAFAQHQQS 143

Query: 124 ----------WMGIFDIPTS----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                     W  + ++  +          +  +IE  V  I   L   F +   D LVG
Sbjct: 144 FRFQEKEINIWREVLELVANLSGWDIRYKQQHAVIEEIVQQIKNILGSKFSTLPYDNLVG 203

Query: 164 VESIIKEIESQLLSG-STEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
           +ES   ++   +  G + +   VGI G+GGIGK+T+  A+Y  IS  F    ++ ++   
Sbjct: 204 MESHFAKLSKLICLGPANDVRVVGITGMGGIGKSTLGRALYERISHQFNSLCYIDDVSKL 263

Query: 223 SEKVGGLA-------------NIHLN-------FERRRLSRMKVLIVFYDLTDLKQIDLL 262
            +  G L              N+ +           +RLS  K LIV  ++   KQ+D+ 
Sbjct: 264 YQGYGTLGVQKQLLSQSLNERNLEICNVSDGTLLAWKRLSNAKALIVLDNVDQDKQLDMF 323

Query: 263 IG-RLDGFVP----GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
            G R+D        GS VII +RD Q+LK H    V  +++VK L+  D+  LF R AF 
Sbjct: 324 TGGRVDLLRKCLGRGSIVIIISRDKQILKAHG---VDVIYQVKPLNDEDAARLFCRKAFK 380

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
            N+  + F +++   + +  G PLA++VLGS L       W SA+  L+     +I  VL
Sbjct: 381 SNYIVSDFEKMTGDALLHCQGHPLAIEVLGSSLFDKDVSHWRSALASLRVNKSKNIMNVL 440

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           ++S+D L+D  + IFLD ACFF G     V   LD   F+ + G+  L+ KS +T +  K
Sbjct: 441 RISFDQLEDTHKEIFLDIACFFNGRYVEGVKEVLDFRGFNLEYGLQVLIDKSFIT-ATFK 499

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN 479
           I MHDLL ++G  IVR++S   P K SRLW  +D Y+V+++N
Sbjct: 500 IHMHDLLCDLGKCIVREKSPTKPRKWSRLWDFKDFYKVMSDN 541



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 14/150 (9%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD-LKETAIEELP---SSIGNLSR 534
            SLP  I  L+SL+ L L GCS L    ++   + D + LK+  I+  P    S  + SR
Sbjct: 739 VSLPNSILGLNSLECLNLSGCSKLYNI-QLLYELRDAEHLKKIDIDGAPIHFQSTSSYSR 797

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
                +        +   +C L      +LS C  L ++P+ IG +  LE L+L+  +F 
Sbjct: 798 QHKKSVGCLMPSSPIFPCMCEL------DLSFC-NLVQIPDAIGIICCLEKLDLSGNNFV 850

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            +P+ +K+LSKL  L+LQ+CK+L+SLPELP
Sbjct: 851 TLPN-LKKLSKLFSLKLQHCKKLKSLPELP 879


>gi|357499599|ref|XP_003620088.1| Resistance protein [Medicago truncatula]
 gi|355495103|gb|AES76306.1| Resistance protein [Medicago truncatula]
          Length = 785

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 168/427 (39%), Positives = 247/427 (57%), Gaps = 47/427 (11%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +D FLSFRG D R+ F  +LN ALC + I TF+DD+ L  G EI+ SL  AIE S+I I 
Sbjct: 20  YDAFLSFRGGDTRYGFTGNLNRALCDKGIRTFMDDRELQGGEEITSSLFKAIEESRIFIP 79

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP-------------- 120
           + S  YASS +CL+ELV I+    + G++V+P+FY V+PS   +                
Sbjct: 80  VLSINYASSSFCLDELVHIIHCFKESGRLVLPIFYDVEPSHVRHHKGSYGKALDDHIERF 139

Query: 121 -----SLGWMGIFDIPTSESV----------------LIEGNVNDISKKLSDLFPSDNKD 159
                S+  +  + I  +++                  IE  V  +SKK+ +  P    D
Sbjct: 140 QNNKHSMDRLQKWKIALTQTANFSGHQINPRNGYEYEFIEKIVKYVSKKI-NCVPLYVAD 198

Query: 160 QLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
             VG+ES + ++ S L  GS  E   +GI+G GG+GKTT+A A+Y++I+  F+G  F+ +
Sbjct: 199 YYVGLESRVLKVNSFLDVGSNGEVQMLGIYGTGGMGKTTLARAVYNSIADQFDGLCFLND 258

Query: 219 IRDESEKVGGLANIHLNF--ERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVI 276
           IR  S K G L ++  N   + +RL R KVL++  D+ +LKQ+ +L G +D F PGS+VI
Sbjct: 259 IRANSAKYG-LEHLQENLLSKLQRLHRKKVLLILDDVHELKQLQVLAGGIDWFGPGSKVI 317

Query: 277 ITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYA 336
           ITTRD QLL  H   R    +E+ +L+  ++L L   +AF  N   A F  + +  + +A
Sbjct: 318 ITTRDEQLLVGHGIER---AYEIDKLNEKEALELLRWSAFKINKVDANFDVILHQAVTFA 374

Query: 337 NGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTA 396
           + +PLAL+V+GS L G +  E +SA   L R+P   IQ++LKVSYD L+D+EQN+FLD +
Sbjct: 375 SVLPLALEVVGSNLFGKNMRESKSA---LTRIPMKKIQEILKVSYDALEDDEQNVFLDIS 431

Query: 397 CFFKGND 403
           CF KG D
Sbjct: 432 CFLKGYD 438


>gi|37781360|gb|AAP44394.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 980

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 188/530 (35%), Positives = 281/530 (53%), Gaps = 47/530 (8%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           E+ +IE    DI  +L     + N   LVG+E  + ++   L  GS     +GI G+ G+
Sbjct: 2   EAGVIERIAEDIMARLGSQRHASNVGNLVGMELHMHQVYKMLGVGSGGVRFLGILGMSGV 61

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--GLANIHL----------------- 234
           GKTT+A  IY NI S F+G+ F+  +RD S K G   L  I L                 
Sbjct: 62  GKTTLARVIYDNIRSQFQGTCFLHEVRDRSAKQGLERLQEILLSEILVVKKLRINDLFEG 121

Query: 235 -NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
            N +++RL   KVL+V  D+  + Q+D L G  + F  GSR+IITT+D  LL  +   ++
Sbjct: 122 ANMQKQRLRYKKVLLVLDDVDHIDQLDTLAGEREWFGDGSRIIITTKDKHLLVKYETEKI 181

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
              + +  L   +SL LF ++AF +NHP   F +LS  VI++  G+P+AL+VLGS+L G 
Sbjct: 182 ---YRMGTLDKYESLQLFKQHAFKKNHPTKEFEDLSAQVIEHTGGLPVALKVLGSFLYGR 238

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
             +EW S V +LK++P  +I K L+ S+ GL++ EQ IFLD ACFF G  +  V   L++
Sbjct: 239 GLDEWLSEVERLKQIPQNEILKKLEPSFIGLNNIEQKIFLDIACFFSGKKKDSVTRILES 298

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
             FS  IGI  L+ K L+TI   +I +H L+Q+MG  IVR+E+  +P   SRLW  EDI 
Sbjct: 299 FHFSPVIGIKVLMEKCLITILQGRIAIHQLIQDMGWHIVRREASYNPRICSRLWKREDIC 358

Query: 474 QVLNENTSLP----TGINLDSLKELYLGGCSNLK----RF-----------PE-ISCNIE 513
            VL  N +        ++L + +E+  GG + ++    RF           PE +   + 
Sbjct: 359 PVLERNLATDKIEGISLHLTNEEEVNFGGKAFMQMTSLRFLKFRNAYVCQGPEFLPDELR 418

Query: 514 DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
            LD      + LP+S     +LV L L   S +  +     +L  L+ +NLS   KL + 
Sbjct: 419 WLDWHGYPSKSLPNSFKG-DQLVSLTLKK-SRIIQLWKTSKDLGKLKYMNLSHSQKLIRT 476

Query: 574 PEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           P +   + +LE L L E K   +I  S+  L KL  L L+NC+ L++LP+
Sbjct: 477 P-DFSVMPNLERLVLEECKSLVEINFSIGDLGKLVLLNLKNCRNLKTLPK 525



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/141 (39%), Positives = 83/141 (58%), Gaps = 5/141 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI----SCNIEDLDLKETAIEELPSSIGNLSRLV 536
           +LP  I L+ L+ L L GCS L+ FPEI    +C + +L L  TA+ EL +S+ NLS + 
Sbjct: 522 TLPKRIRLEKLEILVLSGCSKLRTFPEIEEKMNC-LAELYLGATALSELSASVENLSGVG 580

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
            ++L  C  L+S+ S +  LK L+ L++SGC KL+ LP+++G L  LE  +      + I
Sbjct: 581 VINLCYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEEFHCTHTAIQTI 640

Query: 597 PSSMKQLSKLSDLRLQNCKRL 617
           PSS+  L  L  L L+ C  L
Sbjct: 641 PSSISLLKNLKHLSLRGCNAL 661



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 102/203 (50%), Gaps = 26/203 (12%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           SLP+ I  L  LK L + GCS LK  P+   +   +E+     TAI+ +PSSI  L  L 
Sbjct: 592 SLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLVGLEEFHCTHTAIQTIPSSISLLKNLK 651

Query: 537 DLDLTNCSGL-----------KSVSSRLCNLK---SLRRLNLSGC-LKLEKLPEEIGNLE 581
            L L  C+ L           KSV     NL    SL  L+LS C +    +   +G L 
Sbjct: 652 HLSLRGCNALSSQVSSSSHGQKSVGVNFQNLSGLCSLIMLDLSDCNISDGGILSNLGFLP 711

Query: 582 SLEYLNLAEKDFEKIPS-SMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
           SL  L L   +F  IP+ S+ +L++L  L L  C+RL+SLPELP     I+A  CTSL +
Sbjct: 712 SLAGLILDGNNFSNIPAASISRLTRLEILALAGCRRLESLPELPPSIKEIYADECTSLMS 771

Query: 640 LSNSSTLLTRSSKHWDIFNFSNC 662
           +      LT+ S   ++ +F+ C
Sbjct: 772 IDQ----LTKYSMLHEV-SFTKC 789



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVDLDL 540
           T  +L  LK + L     L R P+ S   N+E L L+E  ++ E+  SIG+L +LV L+L
Sbjct: 455 TSKDLGKLKYMNLSHSQKLIRTPDFSVMPNLERLVLEECKSLVEINFSIGDLGKLVLLNL 514

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            NC  LK++  R+  L+ L  L LSGC KL   PE    +  L  L L      ++ +S+
Sbjct: 515 KNCRNLKTLPKRI-RLEKLEILVLSGCSKLRTFPEIEEKMNCLAELYLGATALSELSASV 573

Query: 601 KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSSTLLT 648
           + LS +  + L  CK L+SLP     L C  ++    C+ LK L +   LL 
Sbjct: 574 ENLSGVGVINLCYCKHLESLPSSIFRLKCLKTLDVSGCSKLKNLPDDLGLLV 625


>gi|227438181|gb|ACP30580.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1275

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 215/747 (28%), Positives = 342/747 (45%), Gaps = 141/747 (18%)

Query: 2   ASSSSSINMIP-HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
            SSSS + ++P  P++ VF++FRG ++R+NFVSHL +AL R+ +  FID    +G  ++ 
Sbjct: 4   VSSSSKVKVLPLPPQYQVFVNFRGDELRYNFVSHLTSALLRDGVNIFIDTNEEKGKSLN- 62

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            L   IE S+I++ +FS  Y  S+WCLNEL+K+ E  +K   +++P+FY V   +  +  
Sbjct: 63  VLFERIEESRIALALFSVRYTESKWCLNELLKMKECMDKGQLLIIPIFYKVQAYEVRF-- 120

Query: 121 SLGWMG------------------------------IFDIPTSESVLIEGNVNDISKKL- 149
             G  G                               FD  + E+  I   V  + + L 
Sbjct: 121 QRGRFGYLFNKLRHVDVDKKKQWSEALNSVADRIGFCFDGKSDENKFIHSIVEKVKQALR 180

Query: 150 ---------SDLFPSDN--------KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGG 192
                    + +F S N         +++ G++  + E+E +      E   +G+ G+ G
Sbjct: 181 KIQLDESKGNSVFLSKNTSLRLGRENNEIYGLKQRLDELEEKFDLDCQETRYLGVVGMPG 240

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG-------------GLANIHLN---- 235
           IGKTT+A  +Y      F     +Q+IR  S+++G             G+ N  +     
Sbjct: 241 IGKTTLARELYETWQCKFVSHVLIQDIRRTSKELGLDCLPALLLEELLGVRNSDVKSSQG 300

Query: 236 -FE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
            +E  +  L + KVL+V  D++D KQI++L+G  D    GSR++I+T D  L+++     
Sbjct: 301 AYESYKSELLKHKVLVVLDDVSDRKQIEVLLGSCDWIRQGSRIVISTSDKSLIQD----V 356

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQN---HPAAGFLELSNIVIKYANGVPLALQVLGSY 349
           V + + V +L++ D L  F R AF  +   H     ++LS   + Y  G PLAL++LG+ 
Sbjct: 357 VDYTYVVPQLNHKDGLGHFGRYAFDHHSSKHNNEVIMKLSKEFVHYVRGHPLALKLLGAD 416

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           L G  E  W++ +  L +     I+ VL+ SY+ L  E + IFLD ACF + ++ Y V +
Sbjct: 417 LNGKDEGYWKTILATLSQSSCPCIRDVLEESYNELSQEHKEIFLDMACFRREDESY-VAS 475

Query: 410 FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
            LD     A   I  L+ K ++ +S+ ++ MHDLL     EI R+   +D     RLWH 
Sbjct: 476 LLDTSE--AAREIKTLINKFMIDVSDGRVEMHDLLYTFAKEICRRAHAQDGKGGHRLWHH 533

Query: 470 EDIYQVL----------------------------------------------------N 477
           +DI  VL                                                    N
Sbjct: 534 QDIIDVLKNIEEGEKVRGIFLNMNEMKREMSLDSCTFEPMLGLRYLKIYSSGCPEQCRPN 593

Query: 478 ENTSLPTGINLDSLKELYLGGCS-NLKRFPEI--SCNIEDLDLKETAIEELPSSIGNLSR 534
              +LP G+N    +  YL      LK  P      N+ DL L  + IE + S   + S+
Sbjct: 594 NKINLPDGLNFPVEEVRYLHWLEFPLKELPPDFNPRNLVDLKLPYSKIERIWSDDKDTSK 653

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDF 593
           L  ++L + S L+ V S L   ++L+RLNL GC K+E LP ++ ++ SL  LNL      
Sbjct: 654 LKWVNLNHSSNLR-VLSGLSKAQNLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSL 712

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSL 620
             +P     L  L  L L NC  L+  
Sbjct: 713 NSLPEI--SLVSLETLILSNCSNLKEF 737



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 22/204 (10%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP  I+L SL+ L L  CSNLK F  IS N+E L L  T++++LP  I  L RL  L++
Sbjct: 714 SLPE-ISLVSLETLILSNCSNLKEFRVISQNLEALYLDGTSVKKLPLDIKILKRLALLNM 772

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-------------------EIGNLE 581
             C+ LK     L +LK+L+ L LS C KL++ P                    EI  + 
Sbjct: 773 KGCTKLKEFPDCLDDLKALKELILSDCSKLQQFPANGESIKVLETLRLDATGLTEIPKIS 832

Query: 582 SLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
           SL+ L L++ D    +P ++ QL +L  L L+ CK L S+P+LP       A  C SLKT
Sbjct: 833 SLQCLCLSKNDQIISLPDNISQLYQLKWLDLKYCKSLTSIPKLPPNLQHFDAHGCCSLKT 892

Query: 640 LSNSSTLLTRSSKHWDIFNFSNCS 663
           +SN    LT + +    F F++C+
Sbjct: 893 VSNPLACLTTTQQICSTFIFTSCN 916


>gi|342365838|gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/385 (40%), Positives = 217/385 (56%), Gaps = 33/385 (8%)

Query: 127 IFDI-PTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTV 185
           +FD+    E+ L+E     I + L    PS  K+ LVG+ES +K++  ++  G  +   +
Sbjct: 56  LFDLLNRDEAALVENIAQHIFEILIPKLPSSMKN-LVGIESRVKQVICRIGLGLNDVRYI 114

Query: 186 GIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMK 245
            IWG+GGIGKTTIA  ++  I S FE + F+ ++R++ EK      +H+  +    +R+ 
Sbjct: 115 NIWGMGGIGKTTIARVVFETIRSIFEVACFLADVREQCEKKD---IVHIQRQLLDQTRIN 171

Query: 246 VLIVFY----------------------DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQ 283
              VF                       D+   KQ++ L G    F PGSR+IITTRDV+
Sbjct: 172 SATVFSEYDGRTIIQNSLRLKKVLLVLDDVNQEKQLENLAGEQAWFGPGSRIIITTRDVE 231

Query: 284 LLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLAL 343
           +LK      +   ++VK L  +++  LF   AF Q  PA GFL+L   VIKY+ G+PLAL
Sbjct: 232 VLKE-----LHETWKVKGLVDSEAFNLFCLKAFKQPEPAEGFLDLFQEVIKYSGGLPLAL 286

Query: 344 QVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND 403
           +VLGSYL G     W SA+ K+K+  H DI  VLK+SYDGLD  E +IFLD ACFFKG  
Sbjct: 287 KVLGSYLNGRPIAVWHSAIEKIKKSSHSDIIDVLKISYDGLDSMENDIFLDIACFFKGRK 346

Query: 404 QYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGK 462
           +  V   LD C   A IGI  L+ ++LVTI   +++ MHDLL+EMG  IV QES  D  K
Sbjct: 347 KGYVTKILDGCGHHAVIGIDVLINRALVTIDKYDELGMHDLLEEMGKLIVIQESPNDASK 406

Query: 463 RSRLWHPEDIYQVLNENTSLPTGIN 487
           RSRLW  ED+  VL +    P  +N
Sbjct: 407 RSRLWWCEDVDSVLTQKKPNPHDMN 431



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 23/192 (11%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
            +L   + + SL+ L L  C+ L+R PE    ++ L    L  T IEE+P+++GNL+ + +
Sbjct: 1533 TLADKLEMCSLETLGLDCCTRLRRLPEFGECMKQLSILILTYTDIEEVPTTLGNLAGVSE 1592

Query: 538  LDLTNCSGLKSVSSRLCNLKSLR---------------RLNLSGCLKLEK---LPEEIGN 579
            LDLT C  L S+    C LK L                 L L GC    K   L  ++G+
Sbjct: 1593 LDLTGCDKLTSLPLTGCFLKKLELHGFVELSCLPHEAPSLKLEGCFSTSKESTLYCDLGH 1652

Query: 580  LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
            L  L  L+L++  F ++P S+ QL +L+ L+L  C  L+ LPELP     +HA+ C SL 
Sbjct: 1653 LAQLTNLDLSDNCFIRVPISIHQLPRLTCLKLSFCDELEVLPELPSSLRELHAQGCDSLD 1712

Query: 639  TLSNSSTLLTRS 650
              SN   +++++
Sbjct: 1713 A-SNVDDVISKA 1723



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)

Query: 499  CSNLKRFPEISCN--IEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
            C  LK  P++S    ++ L+L+    +  +  S+     LV+L+LT C  +++++ +L  
Sbjct: 1481 CYKLKETPDLSGAPVLKILNLEHCRELNYVHPSLALHKSLVELNLTGCYSIETLADKL-E 1539

Query: 556  LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
            + SL  L L  C +L +LPE    ++ L  L L   D E++P+++  L+ +S+L L  C 
Sbjct: 1540 MCSLETLGLDCCTRLRRLPEFGECMKQLSILILTYTDIEEVPTTLGNLAGVSELDLTGCD 1599

Query: 616  RLQSLPELPC 625
            +L SLP   C
Sbjct: 1600 KLTSLPLTGC 1609


>gi|298953305|gb|ADI99937.1| TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]
          Length = 827

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 203/696 (29%), Positives = 321/696 (46%), Gaps = 140/696 (20%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFS 77
           V +SFRG+D R NF SHLN AL +  I  FID++++RG EIS SL  AIE SKISIVI S
Sbjct: 17  VLISFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 76

Query: 78  EGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLGWMGIFDIPT 132
           + YASS WCLNELVKI+  K   GQ+V+P+FY V+PS     +  +  +   +   ++  
Sbjct: 77  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAEL---EVRF 133

Query: 133 SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF---------- 182
            + +   G        +S     +  D+   ++ I++++  +L   + +           
Sbjct: 134 FDKMQAWGEALTAVSHMSGWVVLEKDDEANLIQKIVQQVWKKLTCSTMQLPRQFENLLSH 193

Query: 183 ------NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH--- 233
                   VG+ GIGG+GKTT+A  +Y+ I+  FEG  F+ NIR+ S++  GL  +    
Sbjct: 194 VMIDGTRMVGLHGIGGMGKTTLAKTLYNRIADDFEGCCFLANIREASKQHEGLVRLQEKL 253

Query: 234 ------------------LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
                             +N  R RL   K+L++  D+   +Q+ +L G  D F  GS+V
Sbjct: 254 LYEILMDDFIRVSDLYKGINIIRNRLCSKKILLILDDIDTSEQLQVLAGGYDWFGYGSKV 313

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           I+TTR+  LL  H  +++     V EL+Y ++L LFS +AF  + P   +L+LS   + Y
Sbjct: 314 IVTTRNEHLLDIHGFNKLR---SVPELNYGEALELFSWHAFQCSSPPTEYLQLSKDAVNY 370

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
              +PLAL+VLGS+L    + +++  + +               +   LD + QN+    
Sbjct: 371 CKNLPLALEVLGSFLYSTDQSKFKGILEEF--------------AISNLDKDIQNLLQ-- 414

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQ 454
                                    GI +L+  SL+TI+  NK+ MHDL+Q++G  I R 
Sbjct: 415 -------------------------GIQKLMNLSLLTINQWNKVEMHDLIQQLGHTIARS 449

Query: 455 ESIKDPGKRSRLWHPEDIYQVLNE----------NTSLPTGINLDSLKELYLGGCSNLKR 504
           ++   P ++ +L   +D   VL+               P    LD +         NL  
Sbjct: 450 KTSISPSEK-KLLVGDDAMHVLDGIKDARAVKAIKLEFPKPTKLDIIDSTAFRKVKNLVV 508

Query: 505 F-------PEISC----------------------------NIEDLDLKETAIEELPSSI 529
                   P+IS                             N+  L L  +AI+    + 
Sbjct: 509 LKVKNVISPKISTLDFLPNSLRWMSWSEFPFSSFPSSYSMENLIQLKLPHSAIQHFGRAF 568

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            +  RL  LDL+N   L+ +   L    +L  L+LSGC+ L K+ + +G+L  L  L+L+
Sbjct: 569 MHCERLKQLDLSNSFFLEEIPD-LSAAINLENLSLSGCISLVKVHKSVGSLPKLIDLSLS 627

Query: 590 EK--DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                F++ PS ++ L  L      +C  LQ  P+ 
Sbjct: 628 SHVYGFKQFPSPLR-LKSLKRFSTDHCTILQGYPQF 662



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 33/191 (17%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFP----EISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
            P+ + L SLK      C+ L+ +P    E+  ++EDL  + ++I +L S+I  L+ L D
Sbjct: 636 FPSPLRLKSLKRFSTDHCTILQGYPQFSQEMKSSLEDLWFQSSSITKLSSTIRYLTSLKD 695

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLS-----------GC-------LKLEKLPEEIGN 579
           L + +C  L ++ S + +L  L  + +S            C        +L     +I N
Sbjct: 696 LTIVDCKKLTTLPSTIYDLSKLTSIEVSQSDLSTFPSSYSCPSSLPLLTRLHLYENKITN 755

Query: 580 LESLEY----------LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SS 628
           L+ LE           LNL+  +F  +PS +     L  L   +CK L+ +P++P G  S
Sbjct: 756 LDFLETIAHAAPSLRELNLSNNNFSILPSCIVNFKSLRFLETFDCKFLEEIPKIPEGLIS 815

Query: 629 IHARHCTSLKT 639
           + A H  +L T
Sbjct: 816 LGAYHWPNLPT 826


>gi|297794829|ref|XP_002865299.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311134|gb|EFH41558.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1132

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 213/669 (31%), Positives = 337/669 (50%), Gaps = 64/669 (9%)

Query: 25  KDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSR 84
           K VR++FVSHL+ AL R+ I   ID  ++  + +S    S +E +++S+V+ S    +S 
Sbjct: 14  KQVRYSFVSHLSEALRRKGI---IDVFIDTDDFLSNESQSKVERARVSVVVLS---GNST 67

Query: 85  WCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTS-----ESVLIE 139
            CL++LV +L  +    Q+VVPV Y   P    +  +L   G+  +  S     +S L+E
Sbjct: 68  VCLDKLVNVLGCQRNIDQVVVPVLYGEIPLQVEWDKALNSRGLSSVHQSRNKCTDSELVE 127

Query: 140 GNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIA 199
               D+ +KL  +       + +G+ S   EIE+ +         VGIWG+ GIGKTT+A
Sbjct: 128 EITRDVYEKLFYM-------EGIGIYSKRLEIENIVCKQPFGVRCVGIWGMPGIGKTTLA 180

Query: 200 SAIYSNISSHFEGSYFMQN----IRDE-----------SEKVGGLANI-HLNFERRRLSR 243
            A++  +S  F+ S F+++    I ++            EK G  + I  L+    +L+ 
Sbjct: 181 KAVFDQMSGEFDASCFIEDFDKVIHEKGVYRLLEEHFLKEKPGTDSTITKLSLLSNKLNN 240

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
            +VL+V  DL +    + L+G    F P S +IIT+RD Q+L   R  RV  ++EV+ L+
Sbjct: 241 KRVLVVLDDLRNPLIAEPLLGGFHWFGPESLIIITSRDKQVL---RLCRVNQIYEVQGLN 297

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAV 362
             ++L LF R+A  +N       ELS  VI+YANG PLAL + G  LKG     E E+  
Sbjct: 298 KKEALQLFLRSASIKNKGEQNLKELSMKVIEYANGNPLALSIYGRELKGKKHLSEMETTF 357

Query: 363 NKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGI 422
            KLK  P   I    K SY+ L+D E+NIFLD ACFF+G +   VM  L+ C F   +GI
Sbjct: 358 LKLKGHPPFKIVDAFKSSYESLNDREKNIFLDIACFFEGENVDYVMQLLEGCGFLPHVGI 417

Query: 423 SRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL 482
             LV K LVTIS N++ MH+L+Q++G EI+ +E+++   +RSRLW P +I  +L +N   
Sbjct: 418 DVLVEKCLVTISENRVWMHNLIQDVGREIINKETVQIE-RRSRLWKPGNIKYLLEDNRGK 476

Query: 483 PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNL--SRLVDLDL 540
               +  +  +   G    L++   I      LD    + +  PS+  N+   RL+ +  
Sbjct: 477 EENGDPKTTSKRAKG----LEQIEGIF-----LDTSNISFDAEPSAFENMLNLRLLKIYC 527

Query: 541 TNCSGLKSVSSRLCNLK----SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
           +N      ++    +L+     LR L+      L+ LP+       +E +N+     +K+
Sbjct: 528 SNPEIYPVINFPNGSLRYLPNELRLLHWEN-YPLQSLPQNFDPKHLVE-INMPNSQLQKL 585

Query: 597 PSSMKQLSKLSDLRLQNCKRL---QSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKH 653
               K L  L  +RL + ++L     L E P    I  + CT L++  N+   L     H
Sbjct: 586 WGKTKNLEMLKTVRLCHSQQLVDISDLWEAPHLEVIDLQGCTRLQSFPNTGQFL-----H 640

Query: 654 WDIFNFSNC 662
             + N S+C
Sbjct: 641 LRVLNLSHC 649



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 90/202 (44%), Gaps = 31/202 (15%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG---NLSRLVD 537
           S P       L+ L L  C  +K+ PE+  NI+ L L+ T I  LP S     N ++L++
Sbjct: 631 SFPNTGQFLHLRVLNLSHCIEIKKIPEVPPNIKKLHLQGTGIIALPLSTTFEPNHTKLLN 690

Query: 538 LDLTNCSGLKS-----------VSSRLCN-LKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
             LT   GL             +SS  C  L  L RL+L  C +L+ LP  + NLE LE 
Sbjct: 691 F-LTENPGLSDALKLERLRSLLISSSYCQVLGKLIRLDLKDCSRLQSLPNMV-NLEFLEV 748

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSLKTLS-N 642
           L L+     E I      L +L   R      ++ +P+LP    +   H C SL+ +  +
Sbjct: 749 LELSGCSKLETIQGFPPNLKELYIAR----TAVRQVPQLPQSLELFNAHGCLSLELICLD 804

Query: 643 SSTLLTRSSKHWDIFNFSNCSN 664
           SS LL         + FSNC N
Sbjct: 805 SSKLLMH-------YTFSNCFN 819



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 2/87 (2%)

Query: 374  QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISRLVGKSLVT 432
            ++V +V+YDGL + ++ +FL  A  F   D  LV   + +        G+  L  +SL++
Sbjct: 1024 EEVWRVNYDGLQEIDKALFLYIAGLFNDEDVGLVAPLIANIIDMDVSYGLKVLADRSLIS 1083

Query: 433  ISNN-KITMHDLLQEMGGEIVRQESIK 458
            +S+N +I MH LL++MG EI+   S K
Sbjct: 1084 VSSNGEIVMHYLLRQMGKEILHCSSYK 1110


>gi|297801412|ref|XP_002868590.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314426|gb|EFH44849.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 624

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 185/543 (34%), Positives = 277/543 (51%), Gaps = 64/543 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MASS++ +      ++ VF SF G DVR  F+SHL      + I  F D ++ RG  I  
Sbjct: 1   MASSATHVR-----RYHVFPSFHGPDVRRTFLSHLQHHFASKGITVFKDQEIKRGQTIGL 55

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP------- 113
            L  AI  S++SIV+ S+ YASS WCL+ELV+IL+ +   G+IV+ +FY +DP       
Sbjct: 56  ELKQAIRESRVSIVVLSKKYASSSWCLDELVEILKCREACGKIVMTIFYEIDPFHVRKQI 115

Query: 114 SDAGY-----CPS------LGW-MGIFDIPT----------SESVLIEGNVNDISKKLSD 151
            D G      C S      L W   + D+             E+ +IE    D+S KL+ 
Sbjct: 116 GDFGRAFRETCFSKTKKVRLKWSKALTDVANIAGEHSLRWEDEAKMIEKIAADVSNKLNA 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
             PS + D +VG+E+ ++++ + L         +GI G  GIGKTTIA A+++ +S++F+
Sbjct: 176 T-PSKDFDGMVGMEAHLRKVNAYLHLECDGVKMIGIQGPAGIGKTTIARALFNQLSANFQ 234

Query: 212 GSYFMQNIR-----DESEKVGG--------LANI---------HLNFERRRLSRMKVLIV 249
              F++N++     D  +  G         L+ I         HL   + RL   KVLIV
Sbjct: 235 LKCFIENLKGSYGSDVIDDYGSKLCLQNQLLSKILNEKDMTIDHLGAIKERLLDQKVLIV 294

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ DL+Q+D+L      F  GSR+ +TT D Q+L  H    V +++ V   S  ++L 
Sbjct: 295 LDDVDDLEQLDVLAKEPSWFGLGSRIFVTTEDRQILNAHW---VNYIYHVGYPSEEEALE 351

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +   +AF +N P  GF EL+  +  +   +PL L+V+GS L+  S  EWE  ++KL+   
Sbjct: 352 ILCLSAFQKNSPLVGFEELAKKITNFCGSLPLGLRVVGSSLRRESRHEWERQLSKLETSL 411

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              I+ VL+V Y  L  ++Q++FL  A FF       V   L         G+  L  KS
Sbjct: 412 DRKIENVLRVGYCKLSKKDQSLFLHIALFFNNETVDHVTTMLADSNLDISNGMKTLADKS 471

Query: 430 LVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GI 486
           LV IS    I MH LLQ++G ++V ++S  DPGKR  L   E+I  VL   T   +  GI
Sbjct: 472 LVHISTIGWIKMHRLLQQLGRQLVHEQS-DDPGKRQFLVEAEEIRDVLANETGTGSVIGI 530

Query: 487 NLD 489
           + D
Sbjct: 531 SFD 533


>gi|227438283|gb|ACP30631.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1241

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 226/735 (30%), Positives = 331/735 (45%), Gaps = 147/735 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           + VFL+FRGK +R+ FVSHL  AL R+ I  F+D    +G ++S SL S IE S+I++ I
Sbjct: 17  NQVFLNFRGKQLRYGFVSHLEKALRRDGINVFVDKNETKGKDLS-SLFSRIEESRIALAI 75

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----GYCPSLGW------- 124
           FS  Y  S+WCLNEL KI E  +    +V+P+FY VD  D     G      W       
Sbjct: 76  FSSMYTESKWCLNELEKIKECVDLGKLVVIPIFYKVDTDDVKNLNGVFGDKFWELAKTCN 135

Query: 125 --------MGIFDIP----------TSESVLIEGNVNDISKKLS-DL---FPSDNKD--- 159
                     + +IP          + E   I   V ++ K LS DL    P DN     
Sbjct: 136 GEKFEKWRQALQNIPQKLGFTLGETSDEGDYINQIVGEVVKVLSSDLERQIPIDNHPCSG 195

Query: 160 -------------QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
                         L G+E+ + ++E +L        T+G+ G+ GIGKTT+   +Y   
Sbjct: 196 AEKTPEAAPDLPPPLFGIENRLTQLEMKLDFECENTITIGVVGMPGIGKTTLTKMLYEKW 255

Query: 207 SSHFEGSYFMQNIR---------------------DESEKVGGLANIHLNFERRRLSRMK 245
              F    F+ ++R                     D  ++V  L+   L   +  L   K
Sbjct: 256 RGEFLRCVFLHDVRKLWKDCKMNRDIFMRELLKDDDVKQEVSDLSPESL---KALLLSKK 312

Query: 246 VLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYN 305
            L+V  +++D  QI+ L+G  D    GSR+ ITT D  ++K      V   +EV  LS  
Sbjct: 313 SLVVLDNVSDKSQIETLLGECDWIKRGSRIFITTSDKSVIKG----VVDDTYEVLRLSGR 368

Query: 306 DSLTLFSRNAFGQN--HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
           DS   FS  AF      P   FL LS + + YA G PLAL++LG  L    E  WE  + 
Sbjct: 369 DSFQYFSYFAFSGKLCPPEDNFLNLSRLFVDYAKGNPLALKILGVELSEKDETHWEETLR 428

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR---FSAKI 420
            L + P+  IQ VL++SY+GL    +++FLD ACFF+  D+  V   +++C      A  
Sbjct: 429 DLAQSPNKTIQSVLQISYNGLGQFHKDVFLDVACFFRSGDENYVRCLVESCDTDLVDAAS 488

Query: 421 GISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            I  L  K L+ IS  ++ MHDLL   G E+  Q S        RLW+ + +   L +  
Sbjct: 489 EIKDLASKFLINISGGRVEMHDLLYTFGKELGSQGS-------RRLWNHKGVVGALKKRK 541

Query: 481 SLPT--GINLD--SLKE-LYLGGCS-----NLK----------RFPEISC---------- 510
              +  GI LD   LKE L L  C+     NL+          R  E  C          
Sbjct: 542 GAGSVRGIFLDMSELKEKLPLDRCTFTEMRNLRYLKFYSSRCHRECEADCKLNFPEGLDF 601

Query: 511 -------------------------NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
                                    N+ DL++  + IEEL   + +  +L  +DL++ S 
Sbjct: 602 PLDEVRYLFWLKFPLKKLPKDFNPKNLTDLNMSFSEIEELWEGVKDTPKLKWVDLSHSSK 661

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L +++  L N +SL+RLNL GC  LE+LP E+  ++ L +LN+      ++   M  +S 
Sbjct: 662 LCNLTG-LLNAESLQRLNLEGCTSLEELPREMERMKCLVFLNMRGCTSLRVLPHMNLIS- 719

Query: 606 LSDLRLQNCKRLQSL 620
           +  L L NC  LQ+ 
Sbjct: 720 MKTLILTNCSSLQTF 734



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 42/221 (19%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +NL S+K L L  CS+L+ F  +S N+E L L  +AI +LP+++  L RL+ L+L +C  
Sbjct: 715 MNLISMKTLILTNCSSLQTFRVVSDNLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKM 774

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP-------- 597
           L  +   L  LK+L+ L LSGC KL+  P  I N++SL+ L L       +P        
Sbjct: 775 LVELPECLGKLKALQELVLSGCSKLKTFPIRIENMKSLQLLLLDGTSITDMPKILQLNSS 834

Query: 598 ---------------SSMKQLSK-----LSDLRL-------------QNCKRLQSLPELP 624
                          SS+++L       +++LR+             + CK L S+P LP
Sbjct: 835 KVEDWPELRRGMNGISSLQRLCLSGNDIITNLRIDISLLCHLKLLDLKFCKNLTSIPLLP 894

Query: 625 CGSSIHARH-CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
               I   H C  LKT++    +L    K    F F+NC++
Sbjct: 895 PNVEILDAHGCGKLKTVATPMAILKHMEKVHSKFIFTNCNS 935


>gi|227438285|gb|ACP30632.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1238

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 209/653 (32%), Positives = 317/653 (48%), Gaps = 86/653 (13%)

Query: 27  VRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWC 86
           ++++F SHL+    R+ I    +         S      +EG+  S+V+FS+ Y SS  C
Sbjct: 69  LQYSFASHLSMGFHRKGIYASAN---------SNETLDVMEGASASVVVFSKNYLSSPSC 119

Query: 87  LNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGI-------------FDIPTS 133
           L++LV++L+ + K GQ+VVPVFY V PS+           I             F    S
Sbjct: 120 LDKLVRVLQCRRKSGQLVVPVFYDVSPSNVEVQEQESVDRISALQELREFTGYQFREGCS 179

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           E  L+E  V D+ +K   L P++     +G+   + EIE  L         +GIWG+ GI
Sbjct: 180 ECELVEEIVKDVYEK---LLPAEQ----IGISLRLLEIEHLLCKQPWGIRRLGIWGMPGI 232

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGL--------ANIHLNFER------- 238
           GKTT+A A++  IS  +E  +F+++  D++    GL         NI ++  R       
Sbjct: 233 GKTTLAKAVFDQISGGYEAFFFIKHF-DKAFNEKGLHCLLEEHFGNILMDLPRVCSSITR 291

Query: 239 -----RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
                  LS+ + L+V  D+ +    +  +G    F PGS +IIT+RD Q+    R  ++
Sbjct: 292 PSFPGDILSKKRTLVVLDDVQNPLVAESFLGGFHWFGPGSLIIITSRDKQVF---RHCQI 348

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
            HV+EV+ L+ N++L LFS +A G+N     F++LS  VI YA+G PLAL   G  LKG 
Sbjct: 349 NHVYEVQSLNENEALQLFSHHAIGENIREKKFMKLSMEVIDYASGNPLALSYYGKELKGK 408

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
              E  +   K K      IQ + K SY+ L+D E+NIFLD ACFFKG +   VM  L+ 
Sbjct: 409 KLSEMRTTFLKHKLRTPYKIQDLFKRSYEALNDSEKNIFLDIACFFKGENVDYVMQLLEG 468

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           C F   IGI  LV K LVTIS N++ MH ++Q+ G EI+  E ++   +R RLW P  I 
Sbjct: 469 CGFLPHIGIDVLVEKCLVTISENRVKMHRIIQDFGREIINGEVVQIE-RRRRLWEPWTIK 527

Query: 474 QVL-------NENTSLPTGINLDSLKELYLGGCSNLK--------------RFPEISCNI 512
            +L       N  ++    +    ++ ++L   SNL               RF +I C+ 
Sbjct: 528 FLLEDDKLKANVKSTYTRPLGTVDIEGIFLDA-SNLSFDVKSGAFKHMLSLRFLKIYCSS 586

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRL--CNLKSLRRLNLSGCLKL 570
            + D +      LP  + +L   + L       LKS+  +   C+L     LNLS   +L
Sbjct: 587 YEKDSRVL----LPKGLDSLPYELRLLHWENYPLKSLPQKFDPCHLV---ELNLSYS-QL 638

Query: 571 EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +KL     NL+ L+ + L         + + +   L  L LQ C +LQS P +
Sbjct: 639 QKLWGGTKNLKMLKVVRLCHSQQLTDINDLCKAQDLELLDLQGCTQLQSFPAM 691



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 37/205 (18%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD- 539
           S P    L  L+ + L GC+ ++ FPE+S NI++L L+ T I ELP S   LS  V L+ 
Sbjct: 687 SFPAMGQLRLLRVVNLSGCTEIRSFPEVSPNIKELHLQGTGIRELPVSTVTLSSQVKLNR 746

Query: 540 -----LTNCSGLKSV--SSRLC----------NLKSLRRLNLSGCLKLEKLPEEIGNLES 582
                LT   G+  V    RL           +L  L RLN+  C+ L  LP ++ +LE 
Sbjct: 747 ELSNLLTEFPGVSDVINHERLTSLIKPVSANQHLGKLVRLNMKDCVHLTSLP-DMADLEL 805

Query: 583 LEYLNLAE----KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSL 637
           L+ L+L+      D +  P ++++L             ++  P+LP    I +A  C SL
Sbjct: 806 LQVLDLSGCSNLNDIQGFPRNLEELYLAG-------TAIKEFPQLPLSLEILNAHGCVSL 858

Query: 638 KTLSNSSTLLTRSSKHWDIFNFSNC 662
            ++      L R       + FSNC
Sbjct: 859 ISIPIGFEQLPR------YYTFSNC 877



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 3/75 (4%)

Query: 381  YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITM 440
            YDGLD++E+ +FL  AC F   + YL+    +    S+  GI  L  KSL+ IS   + +
Sbjct: 1090 YDGLDEDERTLFLYIACLFNDEEAYLLAPLSNGLEISS--GIKILTDKSLIHISPYGVLV 1147

Query: 441  HD-LLQEMGGEIVRQ 454
             + LLQ++G E++ +
Sbjct: 1148 REGLLQKIGMEMINR 1162



 Score = 39.7 bits (91), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 14/129 (10%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
           TSLP   +L+ L+ L L GCSNL        N+E+L L  TAI+E P         + L+
Sbjct: 795 TSLPDMADLELLQVLDLSGCSNLNDIQGFPRNLEELYLAGTAIKEFP------QLPLSLE 848

Query: 540 LTNCSGLKSVSSRLCNLKSL-RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           + N  G  S+ S     + L R    S C  L    E++ N+    ++  A  + E++  
Sbjct: 849 ILNAHGCVSLISIPIGFEQLPRYYTFSNCFGLS---EKVVNI----FVKNALTNVERLAR 901

Query: 599 SMKQLSKLS 607
              Q  KL+
Sbjct: 902 EYHQQQKLN 910


>gi|357469193|ref|XP_003604881.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
 gi|355505936|gb|AES87078.1| TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula]
          Length = 524

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 177/497 (35%), Positives = 270/497 (54%), Gaps = 64/497 (12%)

Query: 23  RGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIVIFSEGYA 81
           RG+  R  F SH  ++        F DD +++RG+ IS SL   I  S+IS+ ++S    
Sbjct: 22  RGEANRPKFCSHFYSSPQNPGNHVFKDDDEIHRGDHISISLCRPIGQSRISMXVWSTNTP 81

Query: 82  SSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY--------------------CPS 121
           +SRWC+ E  KI+E     G +VVPVFY V PS+  +                     P 
Sbjct: 82  NSRWCMLEXEKIMEIGRTRGLVVVPVFYEVAPSEVRHQEGPFGKAFDDLISTISVDESPK 141

Query: 122 LGWMG-IFDI----------PTSESVLIEGNVNDISKKL--SDLFPSDNKDQLVGVESII 168
             W   +FDI            +ES  I+  V  ++  L  ++LF +++    VG+ES +
Sbjct: 142 TNWKSELFDIGGIAGFVLIDSRNESADIKNIVEHVTGLLGRTELFVAEHP---VGLESRV 198

Query: 169 KEIESQLLS--GSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            E+ ++LL+   S +   +GIWG+GG+GKTT+A AI++ I +  +     Q + D  + +
Sbjct: 199 -EVATKLLNIKNSEDVLILGIWGMGGMGKTTLAKAIHNQIGNTNQVCVQQQILHDVYKAL 257

Query: 227 G-GLANIH--LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQ 283
              + +I    N  + RL++ ++L+V  D+ +L Q+  L G    F PGSR+IITTR++ 
Sbjct: 258 TFKIRDIESGKNILKERLAQKRILLVLDDVNELDQLKALCGSRKWFGPGSRIIITTRNIH 317

Query: 284 LLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLAL 343
           LL   R   V  V+ ++E+  ++SL LFS +AF Q  P   F + S  VI Y+  +PL  
Sbjct: 318 LL---RLYEVYQVYTIEEMDESESLKLFSWHAFKQPSPIEYFAKHSTDVIAYSGRLPL-- 372

Query: 344 QVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD-EEQNIFLDTACFFKGN 402
                         W   + KLK +PH  +Q+ LKVS+DGL D  E+ IFLD ACFF G 
Sbjct: 373 --------------WHKVLEKLKCIPHDQVQEKLKVSFDGLKDCTEKQIFLDIACFFIGM 418

Query: 403 DQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPG 461
           DQ   +  L+ C F A IGI  LV ++LVT+ +NNK+ MHDLL++MG +I+ +E+  DP 
Sbjct: 419 DQNDAIQILNGCGFFADIGIKVLVERALVTVDNNNKLRMHDLLRDMGRQIIYEEAPADPE 478

Query: 462 KRSRLWHPEDIYQVLNE 478
           KRSRLW   +++ +L +
Sbjct: 479 KRSRLWRHGEVFDILEK 495


>gi|297816422|ref|XP_002876094.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321932|gb|EFH52353.1| hypothetical protein ARALYDRAFT_485509 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1195

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 212/768 (27%), Positives = 345/768 (44%), Gaps = 159/768 (20%)

Query: 3   SSSSSINMIP-HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPS 61
           +SSS +  +P  P+H VF++FRG+++R++FVSHL +AL R  +  FID    +G  +   
Sbjct: 4   ASSSQVKALPLPPQHQVFVNFRGEELRNSFVSHLRSALVRHGVNIFIDTNEQKGKPLH-V 62

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS 121
               IE S+I++ IFS  Y  S+WCLNELVK+ E  +K   +++P+FY V   +  Y   
Sbjct: 63  FFERIEESRIALAIFSLRYTESKWCLNELVKMKECMDKGKLLIIPIFYKVKAYEVRY--Q 120

Query: 122 LGWMGI------------------------------FDIPTSESVLIEGNVNDISKKLSD 151
            G  G                               FD  + E+  I G V ++ + LS 
Sbjct: 121 KGRFGYVFKNLRNADVHQKNQWSEALSSVADRIGFPFDGKSDENNFINGIVEEVKEALSK 180

Query: 152 LFPSDNKD------------------QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           +     KD                  ++ G++  ++E++ +L     E   +G+ G+ GI
Sbjct: 181 ILLDKTKDAFFYHSKNTSMSLGREKHEIYGLKQRLEELKEKLDLDCEETRILGVVGMPGI 240

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG------------------GLANIHLN 235
           GKTT+A  IY ++   F     +Q+IR  S+++G                   + +    
Sbjct: 241 GKTTLAREIYESLRCKFLRHGLIQDIRRTSKELGLDCLPALLLEELLGVRIPDIESTRCA 300

Query: 236 FE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
           +E  +  L   KVL+V  D++D +QID+L+GR D    GSR++I T D  L+++      
Sbjct: 301 YESYKMELYTHKVLVVLDDVSDKEQIDVLLGRCDWIRQGSRIVIATSDKSLIQD----VA 356

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQN---HPAAGFLELSNIVIKYANGVPLALQVLGSYL 350
            + + V +L++ D L  F R AF  +   H     ++LS   + Y  G PL L++LG+ L
Sbjct: 357 DYTYVVPQLNHKDGLGHFGRYAFDHHSNIHNNEVIMKLSKEFVHYGRGHPLVLKLLGADL 416

Query: 351 KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF 410
            G  E+ W++ +  L       I+ VL+VSYD L  E ++IFLD AC F+  D+  + + 
Sbjct: 417 NGKDEDHWKTKLATLAENSSQSIRDVLQVSYDELSQEHKDIFLDIAC-FRSEDESYIASL 475

Query: 411 LDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE 470
           LD+   +++  I  L+ K ++ +S +++ MHDLL     E+ R+   +D     RLWH +
Sbjct: 476 LDSSEAASE--IKALMNKFMINVSEDRVEMHDLLYTFARELCRRAYTQDRRGPHRLWHHQ 533

Query: 471 DIYQVL----------------------------------------------------NE 478
           DI  VL                                                    N 
Sbjct: 534 DITDVLKNIEEGAEVRGIFLNMNEMKREMSLDSCTFKPMHGLRYLKIYSSHCPQQCKPNN 593

Query: 479 NTSLPTGINLDSLKELYLGGCS-NLKRFPEI--SCNIEDLDLKETAIEELPSS--IGNLS 533
             +LP G+N    +  YL      LK  P      N+ DL L  + IE + S+    +  
Sbjct: 594 KINLPDGLNFPLNEVRYLHWLQFPLKEIPPDFNPRNLVDLKLPHSKIERIWSNDKDKDTP 653

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE------------EIGNL- 580
           +L  ++L + S L  +S  L   +SL  LNL GC  L+ LPE               NL 
Sbjct: 654 KLKWVNLNHSSNLWDLSG-LSKAQSLVFLNLKGCTSLKSLPEINLVSLEILILSNCSNLK 712

Query: 581 ------ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                 ++LE L L     +++P +   L +L  L ++ C +L+  P+
Sbjct: 713 EFRVISQNLETLYLDGTSIKELPLNFNILQRLVILNMKGCTKLKEFPD 760



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 111/204 (54%), Gaps = 22/204 (10%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP  INL SL+ L L  CSNLK F  IS N+E L L  T+I+ELP +   L RLV L++
Sbjct: 691 SLPE-INLVSLEILILSNCSNLKEFRVISQNLETLYLDGTSIKELPLNFNILQRLVILNM 749

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-------------------EIGNLE 581
             C+ LK     L +LK+L+ L LS C KL+K P                    EI  + 
Sbjct: 750 KGCTKLKEFPDCLDDLKALKELILSDCSKLQKFPAIRESIMVLEILRLDATTITEIPMIS 809

Query: 582 SLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
           SL+ L  ++ D    +P ++ QL +L  L L+ CKRL S+P+LP     + A  C SLKT
Sbjct: 810 SLQCLCFSKNDQISSLPDNISQLFQLKWLDLKYCKRLTSIPKLPPNLQHLDAHGCCSLKT 869

Query: 640 LSNSSTLLTRSSKHWDIFNFSNCS 663
           +SN    LT + + +  F FSNC+
Sbjct: 870 VSNPLACLTTTQQIYSTFIFSNCN 893


>gi|255561514|ref|XP_002521767.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223538980|gb|EEF40577.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 994

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 198/311 (63%), Gaps = 24/311 (7%)

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG-----------LANIHLNFE- 237
           +GGIGKTTIA  I++ IS+ F+   F+ ++R ESE  G            L + +LN   
Sbjct: 1   MGGIGKTTIAGVIFNRISALFDSCCFLADVRKESETTGLPHLQEALFSMLLEDENLNMHM 60

Query: 238 --------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
                   + RL R KVL+V  D+   +Q++LL G +  + PGSR+IITTRD  LL +H 
Sbjct: 61  LSTEPSCIKTRLHRKKVLVVLDDVNSSRQLELLAG-IHWYGPGSRIIITTRDRHLLVSHA 119

Query: 290 GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              V  V+EVK+L+   +L LFSR AF Q H  A F ELS   I Y  G+PLAL+VLGS 
Sbjct: 120 ---VDFVYEVKDLNEEHALELFSRYAFKQKHRTAEFTELSIRAIDYCKGLPLALKVLGSS 176

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           L G SE +W  ++N+L++  + DIQ+ L++S+DGL +  +++FLD AC+F+G D+  V  
Sbjct: 177 LYGRSENQWNDSLNRLEKHFNKDIQQTLRISFDGLAELNKSLFLDIACYFRGQDKDYVAK 236

Query: 410 FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
            L +  F  + GIS L+  SLVT+ +N + MHDLLQ+MG +IVRQ+S+KDPGKRSRLW  
Sbjct: 237 LLKSFGFFPESGISELIDHSLVTVFDNTLGMHDLLQDMGRDIVRQQSLKDPGKRSRLWDH 296

Query: 470 EDIYQVLNENT 480
           ED+ QVL E +
Sbjct: 297 EDVVQVLMEES 307



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 3/135 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           SLP  I L+SL  L L GCS L++FPEI     ++  L L  TAI E+P S  NL+ L  
Sbjct: 470 SLPGSIGLESLNVLVLSGCSKLEKFPEIVGDMAHLSKLGLDGTAIAEVPHSFANLTGLTF 529

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           L L NC  L+ + S + +LK L+ L+L GC KL+ LP+ +G LE LE L+L +    + P
Sbjct: 530 LSLRNCKNLEKLPSNINSLKYLKNLDLFGCSKLKSLPDSLGYLECLEKLDLGKTSVRQPP 589

Query: 598 SSMKQLSKLSDLRLQ 612
           SS++ L  L  L   
Sbjct: 590 SSIRLLKYLKVLSFH 604



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 110/212 (51%), Gaps = 37/212 (17%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLV 536
           LP+ IN L  LK L L GCS LK  P+    + C +E LDL +T++ + PSSI  L  L 
Sbjct: 541 LPSNINSLKYLKNLDLFGCSKLKSLPDSLGYLEC-LEKLDLGKTSVRQPPSSIRLLKYLK 599

Query: 537 DLDLT---------------------NCSGLKSVSSRLCNLKSLRRLNLSGC-LKLEKLP 574
            L                        +  GL   S  L  L SL  L+LS C L  + +P
Sbjct: 600 VLSFHGIGPIAWQWPYKILSIFGITHDAVGLSLPS--LNGLLSLTELDLSDCNLSDKMIP 657

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH---A 631
            +   L SLE LN+   +F  IP+S+ QL +L  L L +CK L++L +LP  ++IH   A
Sbjct: 658 ADFYTLSSLEVLNIGRNNFVNIPASISQLPRLRFLYLDDCKNLKALRKLP--TTIHEISA 715

Query: 632 RHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
            +CTSL+TLS+   +  + +  W IF F+NCS
Sbjct: 716 NNCTSLETLSSPEVIADKWN--WPIFYFTNCS 745



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 6/138 (4%)

Query: 511 NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK 569
           N+E L L+  T++ ++  SIG L +L+ L+L +C+ L+S+   +  L+SL  L LSGC K
Sbjct: 432 NLETLILEGCTSLSKVHPSIGVLKKLILLNLKDCNCLRSLPGSI-GLESLNVLVLSGCSK 490

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPC 625
           LEK PE +G++  L  L L      ++P S   L+ L+ L L+NCK L+ LP     L  
Sbjct: 491 LEKFPEIVGDMAHLSKLGLDGTAIAEVPHSFANLTGLTFLSLRNCKNLEKLPSNINSLKY 550

Query: 626 GSSIHARHCTSLKTLSNS 643
             ++    C+ LK+L +S
Sbjct: 551 LKNLDLFGCSKLKSLPDS 568


>gi|399920209|gb|AFP55556.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1117

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 227/684 (33%), Positives = 338/684 (49%), Gaps = 108/684 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F   L   L R  I TF DD +L RG  ISP L +AIE S  +I
Sbjct: 18  KYDVFLSFRGEDTRKGFTDRLYHELDRHGIRTFRDDPQLERGTAISPELVTAIEQSMSAI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+ S  YA+S WCL EL KILE   + G+I+ P+FY VDPS                   
Sbjct: 78  VVLSPNYATSTWCLRELSKILECMEERGRIL-PIFYEVDPSHVRHQRGSFAEAFQEHEEE 136

Query: 117 ---GYCPSLGWMGIFDIPTS-----------ESVLIEGNVNDISKKL-SDLFPSDNKDQL 161
              G     GW        S           E+ LI   V+ +  K+   L    +  + 
Sbjct: 137 FGEGNKEVEGWRDALTKVASLAGWTSKDYRYETELIREIVHALCSKVHPSLTVCGSSGKS 196

Query: 162 VGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           VG+++ ++EI+  L   + +   +GIWG+GGIGKTT+A  +Y  IS  FE   F+ N+R+
Sbjct: 197 VGMDTKLEEIDVLLDKEANDVRFIGIWGMGGIGKTTLAQLVYEKISHQFEVCIFLANVRE 256

Query: 222 ---------------------ESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQID 260
                                E+ KV  + N + N  +R L   +VL+V  D+   +Q++
Sbjct: 257 VSATRGLVHLQKQILSQIMKKENVKVWNVYNGN-NMIKRCLCNKEVLLVLDDVDQSEQLE 315

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L+G  D F                           +++K L+ N++L LFS  AF ++ 
Sbjct: 316 NLVGEKDWF------------------------EKPYKLKGLNENEALQLFSWKAFRKHE 351

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P   + E S   +KYA G+PLAL+ LGS+L G S +EW SA+ KL + P++ + K+LK+S
Sbjct: 352 PEEDYAEQSKSFVKYAGGLPLALKTLGSFLNGRSPDEWNSALAKLHQTPNITVFKILKIS 411

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
           +DGLD+ E+ IFLD ACF +      ++  +D+      I    L  KSL+TI S+N++ 
Sbjct: 412 FDGLDEMEKKIFLDIACFRRLYRNEFMIELVDSSDPCNHITRRVLAEKSLLTISSDNQVD 471

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLKELYLG 497
           +HDL+ EM  EIVRQE+ ++PG RSRL    +I+ V  +NT      GI LD L EL   
Sbjct: 472 VHDLIHEMACEIVRQEN-EEPGGRSRLCLRNNIFHVFTQNTGTEAIEGILLD-LAELEEA 529

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL---------------DLTN 542
              NL+ F ++ C ++ L +    +   P  + N  R ++                +L  
Sbjct: 530 DW-NLEAFSKM-CKLKLLYIHNLRLSVGPKFLPNALRFLNWSWYPSKSLPPCFQPDELVE 587

Query: 543 CSGLKSVSSRLCN----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIP 597
            S   S    L N    L +L+ ++LS  + L + P+  G + +LE L L    +   I 
Sbjct: 588 LSLPYSKIDHLWNGKKCLDNLKSIDLSYSINLTRTPDFTG-IPNLEKLILEGCTNLVDIH 646

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP 621
            S+  L +L    L+NC+ ++SLP
Sbjct: 647 PSIALLKRLKIWNLRNCQSIKSLP 670



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 39/211 (18%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLK 518
           KR ++W+  +   +     SLP+ + ++ L+ L + GCS LK  P+    +  +  L L 
Sbjct: 653 KRLKIWNLRNCQSI----KSLPSEVYMEFLETLDVTGCSKLKMIPKFMQKTKRLSKLSLS 708

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNCS--------------GLKSVS------------- 550
            TA+E+LPS I  LS  LV+LDL+                 G+ S               
Sbjct: 709 GTAVEKLPS-IEQLSESLVELDLSGVVRRERPYSLFLQQILGVSSFGLFPRKSPHPLIPL 767

Query: 551 -SRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            + L +  SL  L L+ C L   +LP +IG+L SL  L L   +F  +P+S+  LSKL  
Sbjct: 768 LASLKHFSSLTELYLNDCNLSEGELPNDIGSLSSLVRLELRGNNFVSLPASIHLLSKLRR 827

Query: 609 LRLQNCKRLQSLPELPCGSSI-HARHCTSLK 638
             ++NCKRLQ LPEL     +    +CTSL+
Sbjct: 828 FNVENCKRLQQLPELWANDVLSRTDNCTSLQ 858


>gi|227438203|gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1555

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 214/690 (31%), Positives = 340/690 (49%), Gaps = 98/690 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R   VSHL AAL    I TF DD +L +G+ IS  L  A++GS  ++V
Sbjct: 15  YDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEKGDHISDQLHIALKGSSFAVV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLG----------- 123
           + SE YA+SRWCL EL  I+E   +    V PVFY VDPS   +   LG           
Sbjct: 75  VLSENYATSRWCLMELQLIMEYMKEGTLEVFPVFYGVDPSTVRH--QLGSFSLERYKGRP 132

Query: 124 --------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                   W     +  +           E+V++     DIS++++ L    +   +VG+
Sbjct: 133 EMVHKVHKWREALHLIANLSGLDSRHCVDEAVMVGEIARDISRRVT-LMQKIDSGNIVGM 191

Query: 165 ESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
           ++ ++ +   L   S E   +GIWG+GGIGKT+IA  +Y  +S  F    F++NI+  S+
Sbjct: 192 KAHMEGLNHLLDLESNEVVVLGIWGMGGIGKTSIAKCLYDQLSPRFRARCFIENIKSVSK 251

Query: 225 KVG-------------------GLANIHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLI 263
           +                      L ++    +  ++RL   KV +V   +  + Q+  L 
Sbjct: 252 EHDHDLKHFQKEMLCSILSDDISLWSVEAGCQEIKKRLGHQKVFLVLDGVDKVAQVHALA 311

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
                F PGSR+IITTRD+ LL       V +V+EV  L+  D+L +F + AF    P  
Sbjct: 312 KEKHWFGPGSRIIITTRDMGLLNT---CGVENVYEVNCLNDKDALKMFKQIAFEGPPPCD 368

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKG--MSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           GF +LS    + ++G+P A+Q    +L+G   + E WE A+  L+     +  ++LK+SY
Sbjct: 369 GFEQLSIRATRLSHGLPSAIQAHALFLRGRTAAPEVWEEALTALESSLDENTMEILKISY 428

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITM 440
           +GL    QN+FL  AC F G+    + + L      + + I  L  KSL+ IS N  + M
Sbjct: 429 EGLPKPHQNVFLHVACLFNGDTLQRINSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIM 488

Query: 441 HDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI-YQVLN-----ENTSLPT--GINLD--- 489
           H L+++M  E++R ++      R  L  P+DI Y + N     E T   +    NL    
Sbjct: 489 HKLVEQMAREMIRDDT---SLARKFLRDPQDICYALTNFRDGGEQTECMSLHSCNLACAF 545

Query: 490 SLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE---LPSSI----------------G 530
           S+K   +G   NLK F ++  +++  + K   I +   LP S+                 
Sbjct: 546 SMKASVVGHMHNLK-FLKVYKHVDSRESKLQLIPDQHLLPPSLRLFHWDAFPLRTLPSDA 604

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
           +   LV+L+L + S L+++ S    ++SL+RL+++G   L++LP ++  + SLE L L  
Sbjct: 605 DPYFLVELNLRH-SDLETLWSGTPMMESLKRLDVTGSKHLKQLP-DLSGITSLEELALEH 662

Query: 591 -KDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
               + IP S+ + S +  L+L  C  L+S
Sbjct: 663 CTRLKGIPESIGKRSSIKKLKLSYCGGLRS 692



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 3/104 (2%)

Query: 245  KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
            KVL V   + D +Q   +    + F PGSR+I+ T+D  +L+    S V HV+EV  L Y
Sbjct: 1093 KVLHVADGVKDSEQGQWIKEYANWFAPGSRIILITQDKSVLEE---SEVNHVYEVGSLRY 1149

Query: 305  NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
            +++L LFSR AF Q +P   F  LS   ++ A  +P+A+++ GS
Sbjct: 1150 DEALQLFSRFAFRQPYPPPEFERLSVRAVQLAGFLPMAIRLFGS 1193



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 26/153 (16%)

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSS-------RLCNLKSLR---- 560
           IE LDL     E LP ++ +L+RL  L L NC  LK +          L N ++LR    
Sbjct: 828 IEKLDLSGNDFESLPEAMVSLTRLKTLWLRNCFKLKELPKLTQVQTLTLTNCRNLRSLVK 887

Query: 561 --------------RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                          L L  C  +E L +++     L  L+L+  +F  +PSS++ L+ L
Sbjct: 888 LSETSEEQGRYCLLELCLENCNNVEFLSDQLIYFIKLTNLDLSGHEFVALPSSIRDLTSL 947

Query: 607 SDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
             L L NCK L+S+ +LP     + A  C SL+
Sbjct: 948 VTLCLNNCKNLRSVEKLPLSLQFLDAHGCDSLE 980



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 7/89 (7%)

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEY---LNLAEKDFEKIPSSMKQLSKLSDLRL 611
           +LK L+ +NL+    + K+P  +  +  LE+   L+L+  DFE +P +M  L++L  L L
Sbjct: 801 DLKELKLVNLN----IRKIPSGVHGIHKLEFIEKLDLSGNDFESLPEAMVSLTRLKTLWL 856

Query: 612 QNCKRLQSLPELPCGSSIHARHCTSLKTL 640
           +NC +L+ LP+L    ++   +C +L++L
Sbjct: 857 RNCFKLKELPKLTQVQTLTLTNCRNLRSL 885


>gi|224144422|ref|XP_002325285.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862160|gb|EEE99666.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 191/525 (36%), Positives = 275/525 (52%), Gaps = 74/525 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D R  F+ HL  AL +  I TF DD+ L  G EIS  L  AI+ SKISIV
Sbjct: 1   YHVFLSFRGADTRKTFLGHLYNALVQAGIHTFKDDEELPPGEEISQQLKKAIQESKISIV 60

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GY---- 118
           +FS  YASSRWCLNELV+ILE +N  G+ V P+F  VDPS               Y    
Sbjct: 61  VFSRDYASSRWCLNELVEILECRNTKGRTVFPIFCGVDPSHVRKQEGSFKKAFKAYENKE 120

Query: 119 --------------CPSLGWMGIFDIPT-SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                           +L    I+      ESVLI+  V D+  KL D+   +    LVG
Sbjct: 121 EKEKINKWKNALKDAANLSGKDIYSTANGDESVLIKKIVKDVLNKL-DIKNLNIPKYLVG 179

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++S + +I  + L+ S + + VGI G+ G+GKTTIA  +Y  +   F+GS F+ ++ ++S
Sbjct: 180 IDSCVDDI-IKSLNASDDVSMVGIRGMLGMGKTTIAKVVYQKLFQKFDGSCFLFDVNEKS 238

Query: 224 EKVGGLANIHLN------------FERRRLSRM--------------KVLIVFYDLTDLK 257
           +  G  + + L              +R+++S +              K+L+V   +   +
Sbjct: 239 K--GPDSKVELQKQLIRETLGVNILKRKKISDVDSGISLIKDLLGNKKILLVLDGMDQPQ 296

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++   G    F  GS++IITT + +LL      +V     V+E      L LF+ +AF 
Sbjct: 297 QLETF-GDRSVFAKGSKIIITTTNEKLLAQ---LKVDKKHSVEEWDEEMCLDLFNFHAFE 352

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKV 376
              P     ELS +V++ +  +P AL VLG+    +SE +EWE  + +L++ P   I   
Sbjct: 353 GKTPEEELAELSKVVVEQSGKLPSALVVLGNRFSQISERDEWEKEIYELRKFPDQ-IHSK 411

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF----SAKIGISRLVGKSLVT 432
           LK SYD L+D+ ++IFLD ACFF G D   V + L   R+    + +  I  L  +SL+T
Sbjct: 412 LKGSYDSLEDDLKSIFLDIACFFVGEDADFVASIL-GGRYGYCNNLRSRIQSLEERSLIT 470

Query: 433 IS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           I  ++ I M+DL+Q+MG EIVRQ S K PGK SR+W  ED   VL
Sbjct: 471 IHFDDTIMMNDLVQKMGREIVRQTSHKYPGKHSRIWDHEDALDVL 515


>gi|224145723|ref|XP_002325744.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862619|gb|EEF00126.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 515

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 191/525 (36%), Positives = 275/525 (52%), Gaps = 74/525 (14%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFRG D R  F+ HL  AL +  I TF DD+ L  G EIS  L  AI+ SKISIV
Sbjct: 1   YHVFLSFRGADTRKTFLGHLYNALVQAGIHTFKDDEELPPGEEISQQLKKAIQESKISIV 60

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GY---- 118
           +FS  YASSRWCLNELV+ILE +N  G+ V P+F  VDPS               Y    
Sbjct: 61  VFSRDYASSRWCLNELVEILECRNTKGRTVFPIFCGVDPSHVRKQEGSFKKAFKAYENKE 120

Query: 119 --------------CPSLGWMGIFDIPT-SESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                           +L    I+      ESVLI+  V D+  KL D+   +    LVG
Sbjct: 121 EKEKINKWKNALKDAANLSGKDIYSTANGDESVLIKKIVKDVLNKL-DIKNLNIPKYLVG 179

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ++S + +I  + L+ S + + VGI G+ G+GKTTIA  +Y  +   F+GS F+ ++ ++S
Sbjct: 180 IDSCVDDI-IKSLNASDDVSMVGIRGMLGMGKTTIAKVVYQKLFQKFDGSCFLFDVNEKS 238

Query: 224 EKVGGLANIHLN------------FERRRLSRM--------------KVLIVFYDLTDLK 257
           +  G  + + L              +R+++S +              K+L+V   +   +
Sbjct: 239 K--GPDSKVELQKQLIRETLGVNILKRKKISDVDSGISLIKDLLGNKKILLVLDGMDQPQ 296

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q++   G    F  GS++IITT + +LL      +V     V+E      L LF+ +AF 
Sbjct: 297 QLETF-GDRSVFAKGSKIIITTTNEKLLAQ---LKVDKKHSVEEWDEEMCLDLFNFHAFE 352

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHMDIQKV 376
              P     ELS +V++ +  +P AL VLG+    +SE +EWE  + +L++ P   I   
Sbjct: 353 GKTPEEELAELSKVVVEQSGKLPSALVVLGNRFSQISERDEWEKEIYELRKFPDQ-IHSK 411

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF----SAKIGISRLVGKSLVT 432
           LK SYD L+D+ ++IFLD ACFF G D   V + L   R+    + +  I  L  +SL+T
Sbjct: 412 LKGSYDSLEDDLKSIFLDIACFFVGEDADFVASIL-GGRYGYCNNLRSRIQSLEERSLIT 470

Query: 433 IS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
           I  ++ I M+DL+Q+MG EIVRQ S K PGK SR+W  ED   VL
Sbjct: 471 IDFDDTIMMNDLVQKMGREIVRQTSHKYPGKHSRIWDHEDALDVL 515


>gi|227438251|gb|ACP30615.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1147

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 221/712 (31%), Positives = 350/712 (49%), Gaps = 122/712 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRGKD R +F   L   + RE ++ F D++ + RG EI+ SL + +E S  S+
Sbjct: 13  KYDVFLSFRGKDTRADFAERLYTEIKRE-VKIFRDNEGMERGEEINASLIAGMEDSAASL 71

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           V+FS  YA SRWCL+EL  + +  +   + ++P+FY VDPS                   
Sbjct: 72  VLFSPHYADSRWCLDELATLCDLSSSLDRPMIPIFYKVDPSHVRKQSGDFVKHFEAHAER 131

Query: 117 ----------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ 160
                           G+ P      I+    +E  LI   V  +  + ++  P    + 
Sbjct: 132 FSKERIQPWREAMKLVGHLPGF----IYREGENEDALIRLVVKRVLAEKNNT-PEKVGEY 186

Query: 161 LVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF-EGSYFMQN 218
            VG+ES + ++ + + +  S +   +G++G+GGIGKTT+A A+Y  +  +F E   F+ N
Sbjct: 187 TVGLESRVDDLMNLVNVKSSCDVQILGLYGMGGIGKTTLAKALYKKMVEYFKEQRVFISN 246

Query: 219 IRDESEKVGGLANIHLNFE--------------------RRRLSRMKVLIVFYDLTDLKQ 258
           +R+ S    GL N+                         R  +   K+L+V  D+ ++ Q
Sbjct: 247 VRERSSGKDGLLNLEKTLITELFDSPPEIEDVDQGRDKIRESVHEKKILVVLDDVDNVDQ 306

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L+G    +  GS ++ITTRD  +L +     V   +EV  LS   ++ LFS ++  +
Sbjct: 307 VNALVGERSWYGEGSLIVITTRDEDILNSLS---VSLKYEVNCLSEEQAVKLFSYHSLRK 363

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLK 378
             P    L+LS  ++K    +PLA++V GS      E+EW+  V KL+      ++ VLK
Sbjct: 364 EKPTGSLLKLSENIVKITGLLPLAVEVFGSLFYDKKEKEWQVQVKKLENTKPNGLRDVLK 423

Query: 379 VSYDGLDDEEQNIFLDTACFFKGND--QYLVMNFLDACRFSAKIGISRLVGKSLVT-ISN 435
           VS+D LDDEE+ +FLD AC F   D  +  +++ L  C F+A+  +  L  KSLV  +++
Sbjct: 424 VSFDSLDDEEKKVFLDIACLFLKMDMTKEEIVDVLKGCGFNAEAVLKALRQKSLVKFLAD 483

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLD-SLKEL 494
           N + MHD +++MG ++V +ES +DPGKRSRLW   +I   +   TS+  GI LD   K +
Sbjct: 484 NTLWMHDQIKDMGMQMVVKESPEDPGKRSRLWDRGEIMNNMKGTTSI-RGIVLDFKKKSM 542

Query: 495 YLGG-------CSNLKRF----------------------------PEISCNIEDL--DL 517
            L         CS LK                               E+  N+E L  DL
Sbjct: 543 RLDDNPGTSSVCSYLKNILKPTRTENTIPVEHFVPMKKLRLLQINHVELQGNLELLPSDL 602

Query: 518 K-----ETAIEELPSSIGNLSR---LVDLDLTNCSGLKSVSSRLCNLK---SLRRLNLSG 566
           K        ++++P+S   LSR   ++DL  +   G +S   ++  L+   +LR +NL G
Sbjct: 603 KWIQWRGCPLKDVPASF--LSRQLAVLDLSESGIRGFQSSQLKIVGLQVEGNLRVVNLRG 660

Query: 567 CLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           C  LE +P ++ N +SLE L     K   ++PSS+  L  L  L L+NC  L
Sbjct: 661 CDSLEAIP-DLSNHKSLEKLVFEGCKLLVEVPSSVGNLRSLLHLDLRNCPNL 711



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 100/191 (52%), Gaps = 17/191 (8%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD------LKETAIEELPSSIGNL 532
            T+LP  I+ L  ++++ L  C +LK  P     I D+D      L+ + IEELP + GNL
Sbjct: 937  TTLPEEISQLRFIQKVELRNCLSLKSLPN---KIGDMDTLHSLYLEGSNIEELPENFGNL 993

Query: 533  SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
              LV L +  C  LK + +    LKSL  L +   L +E LP   GNL +L  LNL    
Sbjct: 994  ENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEETLVME-LPGSFGNLSNLRVLNLGNNK 1052

Query: 593  FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSS 651
            F  +PSS+K LS L +L L +C+ L  LP LPC    ++  +C SL+++S+ S L     
Sbjct: 1053 FHSLPSSLKGLSSLKELSLCDCQELTCLPSLPCNLEKLNLANCCSLESISDLSELTMLHE 1112

Query: 652  KHWDIFNFSNC 662
                  N +NC
Sbjct: 1113 -----LNLTNC 1118



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 91/161 (56%), Gaps = 10/161 (6%)

Query: 490 SLKELYLGGCSNLKRFPEISCN--IEDLDLKETAI-EELPSSIGNLSRLVDLDLTNCSGL 546
           +L+ + L GC +L+  P++S +  +E L  +   +  E+PSS+GNL  L+ LDL NC  L
Sbjct: 652 NLRVVNLRGCDSLEAIPDLSNHKSLEKLVFEGCKLLVEVPSSVGNLRSLLHLDLRNCPNL 711

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                 +  LKSL +L LSGC  L  LPE IG +  L+ L L E   + +P S+ +L KL
Sbjct: 712 TEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGYMLCLKELLLDETAIKNLPGSIFRLEKL 771

Query: 607 SDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLL 647
             L L++C+ +  LPE  C  ++     TSL+ L  SST L
Sbjct: 772 QKLSLKSCRSIHELPE--CIGTL-----TSLEELDLSSTSL 805



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 45/200 (22%)

Query: 488 LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
           L SL++LYL GCS+L   PE    + C +++L L ETAI+ LP SI  L +L  L L +C
Sbjct: 721 LKSLEKLYLSGCSSLSVLPENIGYMLC-LKELLLDETAIKNLPGSIFRLEKLQKLSLKSC 779

Query: 544 -----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
                                  + L+S+ S + NLK+L++L++  C  L K+P+ I  L
Sbjct: 780 RSIHELPECIGTLTSLEELDLSSTSLQSLPSSIGNLKNLQKLHVMHCASLSKIPDTINKL 839

Query: 581 ESLEYLNLAEKDFEKIPSSMK--QLSKLSDL--RLQNCKRL-------QSLP------EL 623
            SL+ L +     E++P S+K   LSK+ D   +L + + L       + LP       L
Sbjct: 840 ASLQELIIDGSAVEELPLSLKPGSLSKIPDTINKLASLQELIIDGSAVEELPLSLKPGSL 899

Query: 624 PCGSSIHARHCTSLKTLSNS 643
           PC +   A  C SLK + +S
Sbjct: 900 PCLAKFSAGGCKSLKQVPSS 919



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 80/160 (50%), Gaps = 15/160 (9%)

Query: 487  NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNC 543
            NL++L  L +  C NLK+ P     ++ L    ++ET + ELP S GNLS L  L+L N 
Sbjct: 992  NLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEETLVMELPGSFGNLSNLRVLNLGN- 1050

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            +   S+ S L  L SL+ L+L  C +L  LP    NLE L   N      E I S + +L
Sbjct: 1051 NKFHSLPSSLKGLSSLKELSLCDCQELTCLPSLPCNLEKLNLANCC--SLESI-SDLSEL 1107

Query: 604  SKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNS 643
            + L +L L NC  +  +P L         H T+LK L  S
Sbjct: 1108 TMLHELNLTNCGIVDDIPGL--------EHLTALKRLDMS 1139



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 82/149 (55%), Gaps = 9/149 (6%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFP------EISCNIEDLDLKETAIEELPSSIGNL 532
            + +P  IN L SL+EL + G S ++  P       + C  +       +++++PSS+G L
Sbjct: 865  SKIPDTINKLASLQELIIDG-SAVEELPLSLKPGSLPCLAKFSAGGCKSLKQVPSSVGWL 923

Query: 533  SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
            + L+ L L + + + ++   +  L+ ++++ L  CL L+ LP +IG++++L  L L   +
Sbjct: 924  NSLLQLKL-DSTPITTLPEEISQLRFIQKVELRNCLSLKSLPNKIGDMDTLHSLYLEGSN 982

Query: 593  FEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             E++P +   L  L  L++  CK L+ LP
Sbjct: 983  IEELPENFGNLENLVLLQMNKCKNLKKLP 1011



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 477  NENTSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRL 535
            N+  SLP+ +  L SLKEL L  C  L   P + CN+E L+L      E  S +  L+ L
Sbjct: 1051 NKFHSLPSSLKGLSSLKELSLCDCQELTCLPSLPCNLEKLNLANCCSLESISDLSELTML 1110

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
             +L+LTNC  +  +   L +L +L+RL++SGC
Sbjct: 1111 HELNLTNCGIVDDIPG-LEHLTALKRLDMSGC 1141


>gi|240255823|ref|NP_193173.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658031|gb|AEE83431.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1008

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 223/686 (32%), Positives = 342/686 (49%), Gaps = 93/686 (13%)

Query: 47  FIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVP 106
           F D ++ R   I+P+L  AI+ S+ISI++ S+ YASS WCL+EL++I++ K   GQIV+ 
Sbjct: 2   FDDQEIERSQTIAPALIKAIKESRISIILLSKNYASSSWCLDELLEIVKCKEAMGQIVMT 61

Query: 107 VFYLVDPSDA------------------------GYCPSLGWMG-----IFDIPTSESVL 137
           VFY VDPSD                          +  +L  +G      F    +ES +
Sbjct: 62  VFYGVDPSDVRKQTGEFGRSFNETCSRSTKEKRRKWSQALNHVGNIAGEHFQNWDNESKM 121

Query: 138 IEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKT 196
           IE    DIS KL+     D  D +VG+E+ ++E++  L L        VGI G  GIGKT
Sbjct: 122 IEKISRDISNKLNSTISRDF-DDMVGLEAHLEEMKYLLDLDYKDGAMIVGICGPAGIGKT 180

Query: 197 TIASAIYSNISSHFEGSYFMQNIRDESEK---------------------VGGLANIHLN 235
           TIA A+YS + S F+ S F++N+     +                       G+   HL 
Sbjct: 181 TIARALYSLLLSSFQLSCFVENLSGSDNRGLDEYGFKLRLQEQLLSKILNQNGMRIYHLG 240

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             + RL   KVLIV  D+ DLKQ++ L      F PGSR+I+TT D  LL+ H  ++  H
Sbjct: 241 AIQERLCDQKVLIVLDDVNDLKQLEALANETSWFGPGSRIIVTTEDKGLLEQHGINKTYH 300

Query: 296 V-FEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
           V F     S  ++L +F   AF ++ P  GF +L+  V    + +PL L+V+GS L+G  
Sbjct: 301 VGFP----SIEEALEIFCIYAFRKSSPPDGFKKLTKRVTNVFDNLPLGLRVMGSSLRGKG 356

Query: 355 EEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC 414
           E+EWE+ +++L+     +I+  L+V YD L +EEQ +FL  A FF  N    V+  L   
Sbjct: 357 EDEWEALLDRLETSLDRNIEGALRVGYDSLQEEEQALFLHIAVFFNYNKDEHVIAMLADS 416

Query: 415 RFSAKIGISRLVGKSLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
               K G+  L  KSLV  S + KI MH LLQ++G + ++++   +P KR  L    +I 
Sbjct: 417 NLDVKQGLKILTNKSLVYRSTSGKIVMHKLLQQVGRKAIQRQ---EPWKRHILIDAHEIC 473

Query: 474 QVL--NENTSLPTGINLDS---------------LKELYLGGCSNLKRFPEISCNI-EDL 515
            VL  + +T    GI+LD+               ++ L      N +       +I EDL
Sbjct: 474 YVLENDTDTRAALGISLDTSGINKVIISEGAFKRMRNLRFLSVYNTRYVKNDQVDIPEDL 533

Query: 516 D----LKETAIEELPS----SIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
           +    L+    E  PS    +  +   LV+LD+   S L+ +      L +L++++L+  
Sbjct: 534 EFPPHLRLLRWEAYPSNALPTTFHPEYLVELDMKE-SQLEKLWQGTQPLTNLKKMDLTRS 592

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG 626
             L++LP ++ N  +LE L L+  K   +IPSS  +L KL  L + NC +L+ +P L   
Sbjct: 593 SHLKELP-DLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCTKLEVVPTLINL 651

Query: 627 SSI---HARHCTSLKTLSNSSTLLTR 649
           +S+   +   C  LK     ST ++R
Sbjct: 652 ASLDFFNMHGCFQLKKFPGISTHISR 677



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 33/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL    + GC  LK+FP IS +I  L + +T +EELP+SI   +RL  L + 
Sbjct: 645 VPTLINLASLDFFNMHGCFQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTL-MI 703

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           + SG         N K+L  L LS                 L YL+L     EKIP  +K
Sbjct: 704 SGSG---------NFKTLTYLPLS-----------------LTYLDLRCTGIEKIPDWIK 737

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            L +LS L +  C+ L+SLP+LP     ++A  C SL++++  S+L       +   NF+
Sbjct: 738 DLHELSFLHIGGCRNLKSLPQLPLSIRWLNACDCESLESVACVSSL-----NSFVDLNFT 792

Query: 661 NC 662
           NC
Sbjct: 793 NC 794



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L  L  L++GGC NLK  P++  +I  L+  +    E  + + +L+  VDL+ TNC  L
Sbjct: 738 DLHELSFLHIGGCRNLKSLPQLPLSIRWLNACDCESLESVACVSSLNSFVDLNFTNCFKL 797

Query: 547 KSVSSR 552
              + R
Sbjct: 798 NQETRR 803


>gi|357499885|ref|XP_003620231.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
 gi|355495246|gb|AES76449.1| Disease resistance-like protein GS3-1 [Medicago truncatula]
          Length = 1489

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 244/728 (33%), Positives = 359/728 (49%), Gaps = 108/728 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D RH F  +L  AL  + + TF+D K L +G EI+PSL  AIE S ++I
Sbjct: 11  KYDVFLSFRGEDTRHGFTGYLKKALDDKGVRTFMDAKELKKGEEITPSLLKAIEDSMMAI 70

Query: 74  VIFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSDAGYCP-SLG-WMGIFDI 130
           ++ SE YASS +CL EL  IL++ K+K G+ V+PVFY VDPSD      S G  M   D 
Sbjct: 71  IVLSENYASSSFCLQELSHILDTMKDKAGRYVLPVFYKVDPSDVRKLKRSYGEAMDKHDA 130

Query: 131 PTSESVLIEGNVNDISKKLSDLFPSDNK----------------------------DQLV 162
            +S S  +        +++++L  S  K                            D LV
Sbjct: 131 ASSSSHDVNNKWKASLQQVANLSGSHYKGDEYEYEFIEKIIEQVLRNIKPIVLPAGDCLV 190

Query: 163 GVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRD 221
           G+E   + + S L  GS +  + VGI GIGGIGKTT+A  +Y++I   F+ S F + +RD
Sbjct: 191 GLEHQKQHVTSLLNVGSNDTIHMVGIHGIGGIGKTTLALEVYNSIVHQFQCSCFFEKVRD 250

Query: 222 ESE------------KVGGLANIHLNFERR-------RLSRMKVLIVFYDLTDLKQIDLL 262
             E            ++ G  N+ +   R+       RL + KVL++  D+   +Q+  +
Sbjct: 251 FKESGLIYLQKILLSQIVGETNMEITSVRQGVSILQQRLHQKKVLLLLDDVDKDEQLKAI 310

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G  + F  GSRVIITTRD +LL  H   R    +EVK L+  D+  L    A    +  
Sbjct: 311 AGSSEWFGLGSRVIITTRDKRLLTYHGIERR---YEVKGLNDADAFDLVGWKALKNYYSP 367

Query: 323 A-----------------------------GFLELSNIV---IKYANGVPLALQVLGSYL 350
           +                              F   +N++   + YA+G+PLAL+V+GS+ 
Sbjct: 368 SYKDVLLEQKQGRELNANELCRLKYLKKDVRFSSYANVLKRAVAYASGLPLALEVIGSHF 427

Query: 351 KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF 410
              + E+    +++ +R+P   IQ  L+VS+D L DE++ +FLD AC  KG +   V   
Sbjct: 428 FNKTIEQCNHVLDRCERVPDKKIQTTLQVSFDALQDEDKFVFLDIACCLKGWNLTRVEEI 487

Query: 411 LDACRFS-AKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
           L A   +  K  I  LV KSL+ IS +  +T+HDL+++MG EIVR+ES +DPGKR+RLW 
Sbjct: 488 LHAHYGNIMKDHIDVLVEKSLIKISVSGNVTLHDLIEDMGKEIVRRESPEDPGKRTRLWA 547

Query: 469 PEDIYQVLNENTSLPT----GINLDSLKELYLGGCSNLKRFPEISCNIEDLDL-KETAIE 523
            EDI +V  ENT   T        D   E      S+ K F ++  N+  L         
Sbjct: 548 YEDIKKVFKENTGTSTIKIIHFQFDPWIE-KKKDASDGKAFKKMK-NLRTLIFSTPVCFS 605

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLC--------NLKSLRRLNLSGCLKLEKLPE 575
           E    I N  R+++    N +   S  S L           ++++ LN      L ++P 
Sbjct: 606 ETSEHIPNSLRVLEYSNRNRNYYHSRGSNLFEWDGFLKKKFENMKVLNYDCDTLLTRMP- 664

Query: 576 EIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHAR 632
           +I NL +LE  ++ +      I  S+  LSKL  LRL  C  LQS+P L   S   ++  
Sbjct: 665 DISNLPNLEQFSIQDCTSLITIDESVGFLSKLKILRLIGCNNLQSVPPLNSASLVELNLS 724

Query: 633 HCTSLKTL 640
           HC SL++ 
Sbjct: 725 HCHSLESF 732



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 6/137 (4%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCN-IEDLDLKET-AIEELPSSI-GNLSRLVD 537
            S+P  + LDSL++L L  C NL   P +  + +E L+L +   +E  PS + G L +L  
Sbjct: 1077 SIP-ALKLDSLEKLDLSHCHNLVSIPSLKLDSLETLNLSDCYKLESFPSVVDGLLDKLKF 1135

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            L++ NC  L+++  RL +L SL + NLS C +LE  PE +G + ++  L+L E   +++P
Sbjct: 1136 LNIENCIMLRNIP-RL-SLTSLEQFNLSCCYRLESFPEILGEMRNIPRLHLDETPIKELP 1193

Query: 598  SSMKQLSKLSDLRLQNC 614
               + L++       NC
Sbjct: 1194 FPFQNLTQPQTYYPCNC 1210



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 12/167 (7%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCN-IEDLDLKET-AIEELPSSI-GNLSR 534
           E  S+P  + LDSL++LYL  C NL     +  + +E L L     +E  PS + G L +
Sbjct: 798 ELRSIPP-LKLDSLEKLYLSYCPNLVSISPLKLDSLEKLVLSNCYKLESFPSVVDGFLGK 856

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL-PEEIGNLESLEYLNLAEKDF 593
           L  L + NC  L+S+ +    L SL +L+LS C  L  + P ++ +LE+L   N  +   
Sbjct: 857 LKTLFVRNCHNLRSIPT--LKLDSLEKLDLSHCRNLVSISPLKLDSLETLGLSNCYK--L 912

Query: 594 EKIPSSMKQ-LSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSL 637
           E  PS +   L KL  L ++NC  L+S+P L   S   +   HC +L
Sbjct: 913 ESFPSVVDGFLGKLKTLFVRNCHNLRSIPTLRLDSLEKLDLSHCRNL 959



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 15/162 (9%)

Query: 470  EDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE------ 523
            E +Y     N    + + LDSL++L +  C  L+ FP +   + D  LK   ++      
Sbjct: 1018 EKLYLSYCRNLVSISPLKLDSLEKLVISNCYKLESFPGVVDGLLD-KLKTLFVKNCHNLR 1076

Query: 524  ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEI-GNLES 582
             +P+    L  L  LDL++C  L S+ S    L SL  LNLS C KLE  P  + G L+ 
Sbjct: 1077 SIPAL--KLDSLEKLDLSHCHNLVSIPS--LKLDSLETLNLSDCYKLESFPSVVDGLLDK 1132

Query: 583  LEYLNLAEK-DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            L++LN+        IP     L+ L    L  C RL+S PE+
Sbjct: 1133 LKFLNIENCIMLRNIPRL--SLTSLEQFNLSCCYRLESFPEI 1172



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 25/173 (14%)

Query: 486  INLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
            ++L SL++  L  C  L+ FPEI     NI  L L ET I+ELP    NL++       N
Sbjct: 1150 LSLTSLEQFNLSCCYRLESFPEILGEMRNIPRLHLDETPIKELPFPFQNLTQPQTYYPCN 1209

Query: 543  CSGLKSVSSRLCNLKSLRRLNLSG---------------CLKLEKLPEEIGN-----LES 582
            C G     +R   +  +  L++                 C+K  KL +E  +       +
Sbjct: 1210 C-GHSCFPNRASLMSKMAELSIQAEEKMSPIQSSHVKYICVKKCKLSDEYLSKTLMLFAN 1268

Query: 583  LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL-PCGSSIHARHC 634
            ++ L+L    F  IP S+++ + L  L L +CK L+ +  + PC   + A +C
Sbjct: 1269 VKELHLTNSKFTVIPKSIEKCNFLWKLVLDDCKELEEIKGIPPCLRELSAVNC 1321



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 27/159 (16%)

Query: 486  INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
            + LDSL++LYL  C  L+ FP    N+ D               G L +L  L + +C  
Sbjct: 965  LKLDSLEKLYLSSCYKLESFP----NVVD---------------GFLGKLKTLFVKSCHN 1005

Query: 546  LKSVSSRLCNLKSLRRLNLSGCLKLEKL-PEEIGNLESLEYLNLAEKDFEKIPSSMKQ-L 603
            L+S+ +    L SL +L LS C  L  + P ++ +LE L   N  +   E  P  +   L
Sbjct: 1006 LRSIPA--LKLDSLEKLYLSYCRNLVSISPLKLDSLEKLVISNCYK--LESFPGVVDGLL 1061

Query: 604  SKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
             KL  L ++NC  L+S+P L   S   +   HC +L ++
Sbjct: 1062 DKLKTLFVKNCHNLRSIPALKLDSLEKLDLSHCHNLVSI 1100



 Score = 45.4 bits (106), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 12/147 (8%)

Query: 502 LKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
           L R P+IS   N+E   +++ T++  +  S+G LS+L  L L  C+ L+SV     N  S
Sbjct: 660 LTRMPDISNLPNLEQFSIQDCTSLITIDESVGFLSKLKILRLIGCNNLQSVPP--LNSAS 717

Query: 559 LRRLNLSGCLKLEKLPEEI-GNLESLEYLN-LAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
           L  LNLS C  LE  P  + G L  L+ L  +       IPS +  L  L +L L +C  
Sbjct: 718 LVELNLSHCHSLESFPPVVSGFLGELKILRVIGSSKIRLIPSLV--LPSLEELDLLDCTS 775

Query: 617 LQSLPELPCGSSIHA---RHCTSLKTL 640
           L S   +  G  +     R C  L+++
Sbjct: 776 LDSFSHMVFGDKLKTMSFRGCYELRSI 802


>gi|297836991|ref|XP_002886377.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332218|gb|EFH62636.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 934

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 222/711 (31%), Positives = 345/711 (48%), Gaps = 108/711 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F+SHL        I  F D  + RG  ISP L+  I  S+ISIV
Sbjct: 13  RYRVFTSFHGPDVRKTFLSHLRKEFICNGITMFDDQGIERGQTISPELTQGIRESRISIV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------ 116
           + S+ YASS WCL+EL++IL+ K   GQIV+ VFY V+PSD                   
Sbjct: 73  LLSKNYASSSWCLDELLEILKCKEDMGQIVMTVFYGVNPSDVRKQTGEFGMAFNETCARK 132

Query: 117 ------GYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  +  +L  +G      F    +ES +IE    D+S KL +  P+ + + +VG+E
Sbjct: 133 TEEERRKWSQALNDVGNIAGEHFLNWDNESKMIEKIARDVSNKL-NATPARDFEDMVGLE 191

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
           + +K+I+S L                 IGKTTIA A++S +SS F+ + FM+N+R     
Sbjct: 192 AHLKKIQSLLHC---------------IGKTTIARALHSRLSSSFQLTCFMENLRGSYN- 235

Query: 226 VGGLANIHLNFERRRLSRMKVL-----------IVFYDLTDLKQIDLLIGRLDGFVPGSR 274
            GGL    L  + +     K+L            V   L D KQ++ L    + F PGSR
Sbjct: 236 -GGLDEYGLKLQLQEQLLSKILNQNGMRIYHLGAVPERLCDQKQLEALANETNWFGPGSR 294

Query: 275 VIITTRDVQLLKNHRGSRVGHV-FEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVI 333
           +I+TT D ++L+ H      HV F  KE    ++  +F R AF ++    GF++L+  V 
Sbjct: 295 IIVTTEDQEILEQHDIKNTYHVDFPTKE----EACKIFCRYAFRRSLAPCGFVQLAERVT 350

Query: 334 KYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFL 393
           +  + +PL L+V+GS L+G  E +WE  +++L+      I  VL+V YD L  ++Q +FL
Sbjct: 351 ELCSNLPLGLRVMGSTLRGKKEGDWEGILHRLENSLDQQINGVLRVGYDTLHKDDQYLFL 410

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQEMGGEIV 452
             A FF   D   V   L        +G+  L  KS++ I+N+  I MH LLQ++G E V
Sbjct: 411 LIAFFFNYQDGDHVKIMLSDSNLDVSLGLKTLTYKSIIQIANDGNIVMHKLLQQVGREAV 470

Query: 453 RQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLDSLKELYLGGCSNLKRFPEISC 510
           +   +++P  R  L   ++I  VL   +   +  GI+ D +  +  G   + + F ++ C
Sbjct: 471 Q---LQNPKIRKILIDTDEICDVLENGSGSRSVMGISFD-ISTIQDGVYISARAFKKM-C 525

Query: 511 NIEDLDLKETAIE-----ELPSSIGNLSR----------------------LVDLDLTN- 542
           N+  L++ +T  +      +P  +G   R                      LV+L L + 
Sbjct: 526 NLRFLNIYKTRCDGNDRVHVPEDMGFPPRLRLLRWDVYPGKCLPRTFSPEYLVELKLQHN 585

Query: 543 -CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSM 600
               L   + RL NLK   +++L+   KL++LP ++ N  +LE L L   K   ++PSS+
Sbjct: 586 KLEKLWEGTQRLTNLK---KMDLTESRKLKELP-DLSNATNLEQLTLVSCKSLVRLPSSI 641

Query: 601 KQLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTSLKTLSNSSTLLT 648
             L KL  L +  C+ LQ +P    L     +    C  L+ L + ST +T
Sbjct: 642 GNLHKLEWLLVGLCRNLQIVPSHFNLASLERVEMYGCWKLRKLVDISTNIT 692



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 89/187 (47%), Gaps = 34/187 (18%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK++ L     LK  P++S   N+E L L    ++  LPSSIGNL +L  L +  C 
Sbjct: 597 LTNLKKMDLTESRKLKELPDLSNATNLEQLTLVSCKSLVRLPSSIGNLHKLEWLLVGLCR 656

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKL--------------------PEEIGNLESLE 584
            L+ V S   NL SL R+ + GC KL KL                    PE I     L+
Sbjct: 657 NLQIVPSHF-NLASLERVEMYGCWKLRKLVDISTNITTLFITETMLEEFPESIRLWSRLQ 715

Query: 585 YLNL---------AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHC 634
            L +         +    +KIP  +K L  L +L +  C +L SLPELP   +I  A +C
Sbjct: 716 TLRIQGSLEGSHQSGAGIKKIPDCIKYLHGLKELYIVGCPKLVSLPELPSSLTILQASNC 775

Query: 635 TSLKTLS 641
            SL+T+S
Sbjct: 776 ESLETVS 782



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 16/123 (13%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P+  NL SL+ + + GC  L++  +IS NI  L + ET +EE P SI   SRL  L + 
Sbjct: 661 VPSHFNLASLERVEMYGCWKLRKLVDISTNITTLFITETMLEEFPESIRLWSRLQTLRIQ 720

Query: 542 NC--------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--------EIGNLESLEY 585
                     +G+K +   +  L  L+ L + GC KL  LPE        +  N ESLE 
Sbjct: 721 GSLEGSHQSGAGIKKIPDCIKYLHGLKELYIVGCPKLVSLPELPSSLTILQASNCESLET 780

Query: 586 LNL 588
           ++L
Sbjct: 781 VSL 783


>gi|297850940|ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339193|gb|EFH69610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 177/537 (32%), Positives = 288/537 (53%), Gaps = 64/537 (11%)

Query: 12  PHP-KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGS 69
           PH  K+DVFLSFRG D R NF   L  AL + K+  F D++ + RG+EI  SL +++E S
Sbjct: 9   PHRLKYDVFLSFRGADTRDNFGGRLYEALMK-KVRVFRDNEGMKRGDEIGSSLQASMEDS 67

Query: 70  KISIVIFSEGYASSRWCLNELVKILESKNK-YGQIVVPVFYLVDPSDAG----------- 117
             S+++ S  YA+S WCL+EL  + + K+    + ++PVFY+VDPS              
Sbjct: 68  AASVIVLSPNYANSHWCLDELAMLCDLKSSSLDRRMLPVFYMVDPSHVRKQSGDFDKDFQ 127

Query: 118 -------------YCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                        +  ++  +G     +    + E  +IE  V  +  +LS+  P    +
Sbjct: 128 KLAKTFSEAEIKRWKDAMKLVGNLAGYVCHKDSKEDDIIELVVKRVLAELSNT-PEKVGE 186

Query: 160 QLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
            +VG+ES +K++   +++ S+     +G++G+GGIGKTT+A A Y+ I  +F+   F+ +
Sbjct: 187 YIVGLESPMKDLMDLIVAESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFKQRAFISD 246

Query: 219 IRDESEKVGGLANIH---------LNFERRRLSR-----------MKVLIVFYDLTDLKQ 258
           IR+ S    GL N+          L  E   +SR            K+++V  D+  + Q
Sbjct: 247 IRERSSAEDGLVNLQKSLIKELFRLVTEIEDVSRGLEKIKENVHDKKIIVVLDDVDHIDQ 306

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L+G    +  G+ ++ITTRD ++L       V   +EVK L+ + +L LFS ++  +
Sbjct: 307 VNALVGETRWYGQGTLIVITTRDSEILSK---LSVNQQYEVKCLTESQALQLFSYHSLRK 363

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMPHMDIQKVL 377
             P    +ELS  +++ +  +PLA++V GS L    EE EW++ ++KLK+    ++Q VL
Sbjct: 364 EKPTDNLMELSTKIVRISGLLPLAVEVFGSLLYDKKEEKEWQTQLDKLKKTQPGNLQDVL 423

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGND--QYLVMNFLDACRFSAKIGISRLVGKSLVTI-S 434
            +S++ LDDEE+ +FLD AC F      +  V+  L  C F+A+  +S L  KSLV I +
Sbjct: 424 ALSFESLDDEEKKVFLDIACLFLRMQITKEEVVEVLKGCGFNAEAALSVLRQKSLVKIFA 483

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLD 489
           N+ + MHD +++MG ++   E   DP  RSRLW   +I  VLN  + TS   GI  D
Sbjct: 484 NDTLWMHDQIRDMGRKMDLTEIHGDPSIRSRLWDRAEIMTVLNNMKGTSSIQGIVFD 540



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 19/189 (10%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            L+ L  L +  C  L+  PE   +++ L    ++ET++ +LP S GNLS L  L +    
Sbjct: 984  LEKLVLLRMNNCKKLRGLPESFGDLKSLHRLFMQETSVTKLPESFGNLSNLRVLKMLKKP 1043

Query: 545  GLKSVSSR----------LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
              +S  S             NL SL  L+        K+P+++  L S++ LNL    F 
Sbjct: 1044 FFRSSESEEPHFVELPNSFSNLSSLEELDARSWAISGKIPDDLEKLTSMKILNLGNNYFH 1103

Query: 595  KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKH 653
             +PSS+K LS L  L L +C+ L+ LP LP     +   +C SL+++S+ S L     K 
Sbjct: 1104 SLPSSLKGLSNLKKLSLYDCRELKCLPPLPWRLEQLILANCFSLESISDLSNL-----KF 1158

Query: 654  WDIFNFSNC 662
             D  N +NC
Sbjct: 1159 LDELNLTNC 1167



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 489 DSLKELYLGGCSNLKRFPEISCN--IEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           ++LK + L GC +L+  P++S +  +E L  +    + ++P S+GNL +L+ LDL  CS 
Sbjct: 679 ENLKVINLRGCHSLEAIPDLSNHKALEKLVFERCNLLVKVPRSVGNLRKLLQLDLRRCSK 738

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L      +  LK L +L LSGC  L  LPE IG++  L+ L L       +P S+  L K
Sbjct: 739 LSEFLEDVSELKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLPDSIFCLQK 798

Query: 606 LSDLRLQNCKRLQSLP 621
           L  L L  C+ +Q LP
Sbjct: 799 LEKLSLMGCRSIQELP 814



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 31/172 (18%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISC-----NIEDLDLKETAIEELPSSIGNLS 533
           ++LP  I  L  L++L L GC +++  P  +C     ++E+L L +TA++ LP SIGNL 
Sbjct: 787 SNLPDSIFCLQKLEKLSLMGCRSIQELP--TCVGKLTSLEELYLDDTALQNLPDSIGNLK 844

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS-----------------------GCLKL 570
            L  L   +C+ L  +   +  LKSL+ L L+                       GC  L
Sbjct: 845 NLQKLHFMHCASLSKIPDTINELKSLKELFLNGSAVEELPLNPGSLPDLSDLSAGGCKFL 904

Query: 571 EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           + +P  IG L  L  L L     E +P  +  L  L  L L+NCK L+ LPE
Sbjct: 905 KHVPSSIGGLNYLLQLQLDRTPIETLPEEIGDLHFLHKLELRNCKSLKGLPE 956



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 27/180 (15%)

Query: 470  EDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEEL 525
            E++Y       +LP  I NL +L++L+   C++L + P+      ++++L L  +A+EEL
Sbjct: 824  EELYLDDTALQNLPDSIGNLKNLQKLHFMHCASLSKIPDTINELKSLKELFLNGSAVEEL 883

Query: 526  PSSIGNLSRLVDLDLTNCSGLKSVSS-----------------------RLCNLKSLRRL 562
            P + G+L  L DL    C  LK V S                        + +L  L +L
Sbjct: 884  PLNPGSLPDLSDLSAGGCKFLKHVPSSIGGLNYLLQLQLDRTPIETLPEEIGDLHFLHKL 943

Query: 563  NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
             L  C  L+ LPE I +++ L  L L   + E +P    +L KL  LR+ NCK+L+ LPE
Sbjct: 944  ELRNCKSLKGLPESIKDMDQLHSLYLEGSNIENLPEDFGKLEKLVLLRMNNCKKLRGLPE 1003



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 29/139 (20%)

Query: 488 LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
           L  L++L+L GCSNL   PE    + C +++L L  TAI  LP SI              
Sbjct: 749 LKCLEKLFLSGCSNLSVLPENIGSMPC-LKELLLDGTAISNLPDSI-------------- 793

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
                     C L+ L +L+L GC  +++LP  +G L SLE L L +   + +P S+  L
Sbjct: 794 ---------FC-LQKLEKLSLMGCRSIQELPTCVGKLTSLEELYLDDTALQNLPDSIGNL 843

Query: 604 SKLSDLRLQNCKRLQSLPE 622
             L  L   +C  L  +P+
Sbjct: 844 KNLQKLHFMHCASLSKIPD 862


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 219/693 (31%), Positives = 327/693 (47%), Gaps = 121/693 (17%)

Query: 47  FIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVP 106
           F D ++ R   I+P+L  AI+ S+ISI++ S+ YASS WCL+EL++I++ K   GQIV+ 
Sbjct: 2   FDDQEIERSQTIAPALIKAIKESRISIILLSKNYASSSWCLDELLEIVKCKEAMGQIVMT 61

Query: 107 VFYLVDPSDA------------------------GYCPSLGWMG-----IFDIPTSESVL 137
           VFY VDPSD                          +  +L  +G      F    +ES +
Sbjct: 62  VFYGVDPSDVRKQTGEFGRSFNETCSRSTKEKRRKWSQALNHVGNIAGEHFQNWDNESKM 121

Query: 138 IEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKT 196
           IE    DIS KL+     D  D +VG+E+ ++E++  L L        VGI G  GIGKT
Sbjct: 122 IEKISRDISNKLNSTISRDF-DDMVGLEAHLEEMKYLLDLDYKDGAMIVGICGPAGIGKT 180

Query: 197 TIASAIYSNISSHFEGSYFMQNIRDESEK---------------------VGGLANIHLN 235
           TIA A+YS + S F+ S F++N+     +                       G+   HL 
Sbjct: 181 TIARALYSLLLSSFQLSCFVENLSGSDNRGLDEYGFKLRLQEQLLSKILNQNGMRIYHLG 240

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             + RL   KVLIV  D+ DLKQ++ L      F PGSR+I+TT D  LL+ H    +  
Sbjct: 241 AIQERLCDQKVLIVLDDVNDLKQLEALANETSWFGPGSRIIVTTEDKGLLEQHG---INK 297

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            + V   S  ++L +F   AF ++ P  GF +L+  V    + +PL L+V+GS L+G  E
Sbjct: 298 TYHVGFPSIEEALEIFCIYAFRKSSPPDGFKKLTKRVTNVFDNLPLGLRVMGSSLRGKGE 357

Query: 356 EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR 415
           +EWE+ +++L+     +I+  L+V YD L +EEQ +FL  A FF  N    V+  L    
Sbjct: 358 DEWEALLDRLETSLDRNIEGALRVGYDSLQEEEQALFLHIAVFFNYNKDEHVIAMLADSN 417

Query: 416 FSAKIGISRLVGKSLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
              K G+  L  KSLV  S + KI MH LLQ++G + ++++   +P KR  L    +I  
Sbjct: 418 LDVKQGLKILTNKSLVYRSTSGKIVMHKLLQQVGRKAIQRQ---EPWKRHILIDAHEICY 474

Query: 475 VL--NENTSLPTGINLDS---------------LKELYLGGCSNLKRFPEISCNIED--- 514
           VL  + +T    GI+LD+               ++ L      N +       +I +   
Sbjct: 475 VLENDTDTRAALGISLDTSGINKVIISEGAFKRMRNLRFLSVYNTRYVKNDQVDIPEDLE 534

Query: 515 ---------------LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
                          LD+KE+ +E+L      L+ L  +DLT  S LK +   L N  +L
Sbjct: 535 FPPHLRLLRWEAYPKLDMKESQLEKLWQGTQPLTNLKKMDLTRSSHLKELPD-LSNATNL 593

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
            RL LS C                       K   +IPSS  +L KL  L + NC +L+ 
Sbjct: 594 ERLELSYC-----------------------KSLVEIPSSFSELRKLETLVIHNCTKLEV 630

Query: 620 LPELPCGSSI---HARHCTSLKTLSNSSTLLTR 649
           +P L   +S+   +   C  LK     ST ++R
Sbjct: 631 VPTLINLASLDFFNMHGCFQLKKFPGISTHISR 663



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 37/203 (18%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK++ L   S+LK  P++S   N+E L+L    ++ E+PSS   L +L  L + NC+
Sbjct: 567 LTNLKKMDLTRSSHLKELPDLSNATNLERLELSYCKSLVEIPSSFSELRKLETLVIHNCT 626

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+ V + L NL SL   N+ GC +L+K P   G    +  L + +   E++P+S+   +
Sbjct: 627 KLEVVPT-LINLASLDFFNMHGCFQLKKFP---GISTHISRLVIDDTLVEELPTSIILCT 682

Query: 605 KLS-----------------------DLRLQN-CKRLQSLPELPCG-SSIHARHCTSLKT 639
           +L                        DLR    C+ L+SLP+LP     ++A  C SL++
Sbjct: 683 RLRTLMISGSGNFKTLTYLPLSLTYLDLRCTGGCRNLKSLPQLPLSIRWLNACDCESLES 742

Query: 640 LSNSSTLLTRSSKHWDIFNFSNC 662
           ++  S+L       +   NF+NC
Sbjct: 743 VACVSSL-----NSFVDLNFTNC 760



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL    + GC  LK+FP IS +I  L + +T +EELP+SI   +RL  L ++
Sbjct: 631 VPTLINLASLDFFNMHGCFQLKKFPGISTHISRLVIDDTLVEELPTSIILCTRLRTLMIS 690

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                K+++    +L  L      GC  L+ LP+      S+ +LN  + +  +  + + 
Sbjct: 691 GSGNFKTLTYLPLSLTYLDLRCTGGCRNLKSLPQLP---LSIRWLNACDCESLESVACVS 747

Query: 602 QLSKLSDLRLQNCKRL 617
            L+   DL   NC +L
Sbjct: 748 SLNSFVDLNFTNCFKL 763


>gi|242276421|gb|ACS91452.1| M1 [Linum usitatissimum]
          Length = 1401

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/525 (31%), Positives = 270/525 (51%), Gaps = 55/525 (10%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           +  S++   + P  +++VFLSFRG D R+     L   LCR KI TF DD +L +G EI 
Sbjct: 46  IPDSTNPSGLFPSVEYEVFLSFRGPDTRYQITDILYRFLCRTKIHTFRDDDELRKGEEIG 105

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSDAGY 118
            +L  AI  SKI + I S GYA+S+WCL EL +I+  +     +I+ P+FY+VDP D  +
Sbjct: 106 SNLLRAIYQSKIYVPIISRGYANSKWCLMELAEIVRYQELDTRRIIFPIFYMVDPKDVRH 165

Query: 119 CPS------------------LGWMGIFD-IPTSESVLIEGN------VNDISKKLSDLF 153
                                  W    + + T +   ++ N       +++S  +    
Sbjct: 166 QTGHYRKAFQEHATKYDEMTIQNWKNALNKVGTLKGWHVKNNDEQGAIADEVSANIWSRI 225

Query: 154 PSDN----KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
             +N     D+LVG++  ++ I   L   S     VG++G+GGIGKTT A A+Y+ ISSH
Sbjct: 226 SKENFILETDELVGIDDHVEAILKTLSLDSESVAMVGLYGMGGIGKTTTAKAVYNKISSH 285

Query: 210 FEGSYFMQNIRDESEKVGGLANIH------------LNFE---------RRRLSRMKVLI 248
           F+   F+ N+R   E+  G+  +             + F          + R+S+ K+L+
Sbjct: 286 FDRCCFVDNVRAMQEQKDGIFILQKKLVSEILRMDSVGFTNDSGGRKMIKERVSKFKILV 345

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  D+ +  + + ++G    F  G+R IIT+R+  +L     ++   ++EV  +S   SL
Sbjct: 346 VLDDVDEKFKFEDILGCPKDFDSGTRFIITSRNQNVLSRLNENQC-KLYEVGSMSQQHSL 404

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRM 368
            LFS++AF ++ P + +  L+N ++    G+PL L+V GS L       WE  + +L++ 
Sbjct: 405 ELFSKHAFKKDTPPSDYETLANDIVSTTGGLPLTLKVTGSLLFRQEIGVWEDTLEQLRKT 464

Query: 369 PHMD-IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVG 427
             +D +   LK+SYD L  E + IFLD ACFF G ++         C F  K  I  L+ 
Sbjct: 465 LDLDEVYDRLKISYDALKAEAKEIFLDIACFFIGRNKEQPYYMWSDCNFYPKSNIIFLIQ 524

Query: 428 KSLVTISNNKI-TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           + ++ + ++ +  MHD L++MG EIVR+E ++ P KRSR+   E+
Sbjct: 525 RCMIQVGDDGVFQMHDQLRDMGREIVRREDVERPWKRSRICSSEE 569



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 50/179 (27%)

Query: 486  INLDSLKELYLGGCSNLKRFPE--ISC-NIEDLDLKETA-IEELPSSIGNLSRLVDLDLT 541
            + L+ LKE  +GGC +L    +  + C ++ +L +++   +EE    IG+L  LVDL L 
Sbjct: 1098 LRLEKLKEPDIGGCPDLTELVQTVVVCPSLVELTIRDCPRLEEDLDVIGSLQELVDLRLE 1157

Query: 542  ---NCSGLKSVSSR---------------------LCNLKSLRRLNLSGC-----LKLEK 572
                 SG++ ++S                      L  LKSLR+L L GC     L+LEK
Sbjct: 1158 LDDTSSGIERIASLSKLKKLTTLRVKVPSLLEFEGLAELKSLRKLILEGCTSLRRLRLEK 1217

Query: 573  LPE-EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ------SLPELP 624
            L E +IG             D  ++  ++     L +L +++C RL+      SLP+ P
Sbjct: 1218 LKEPDIGGC----------PDLTELVQTVVVCPSLVELTIRDCPRLEVGPMIRSLPKFP 1266



 Score = 39.3 bits (90), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 32/159 (20%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
            L SL+ L L GC++L+R                           L +L + D+  C  L 
Sbjct: 1081 LKSLQRLILEGCTSLERL-------------------------RLEKLKEPDIGGCPDLT 1115

Query: 548  SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD----FEKIPSSMKQL 603
             +   +    SL  L +  C +LE+  + IG+L+ L  L L   D     E+I +S+ +L
Sbjct: 1116 ELVQTVVVCPSLVELTIRDCPRLEEDLDVIGSLQELVDLRLELDDTSSGIERI-ASLSKL 1174

Query: 604  SKLSDLRLQ--NCKRLQSLPELPCGSSIHARHCTSLKTL 640
             KL+ LR++  +    + L EL     +    CTSL+ L
Sbjct: 1175 KKLTTLRVKVPSLLEFEGLAELKSLRKLILEGCTSLRRL 1213


>gi|357456945|ref|XP_003598753.1| Resistance protein [Medicago truncatula]
 gi|355487801|gb|AES69004.1| Resistance protein [Medicago truncatula]
          Length = 657

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 224/693 (32%), Positives = 329/693 (47%), Gaps = 139/693 (20%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREK-IETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           +DVFL+FRGKD R+NF  +L  +L  ++ I+TF+DD+ + +G EI+P+L  AIE S+I I
Sbjct: 15  YDVFLNFRGKDTRNNFTGNLYNSLQNQRGIQTFMDDEEIQKGEEITPTLLQAIEESRIFI 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL----------- 122
            IFS  YASS +CL ELV ILE     G++  PVFY VDPS   Y               
Sbjct: 75  AIFSPNYASSTFCLTELVTILECSMSQGRLFSPVFYDVDPSQIRYLTGTYAEAFKKHEER 134

Query: 123 ---------GWMGIFDIPTS------------ESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                     W        +            E   IE  V  +S K++ + P       
Sbjct: 135 FGDDKHKMQKWRDALHQAANMSGWHFKPGYELEYKFIEKIVKAVSVKINRI-PLHVAKNP 193

Query: 162 VGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           VG+ES I E+ S L L  + + N VGI+GIGGIGK+T A A+++ I+  FEG  F+ ++R
Sbjct: 194 VGLESQILEVISLLGLDSNEKVNMVGIYGIGGIGKSTTARAVHNLIADQFEGVCFLDDLR 253

Query: 221 DES------------------EKVGGLANIH--LNFERRRLSRMKVLIVFYDLTDLKQID 260
                                EK   + +++  ++  +RRL R KVL++  ++   KQ+ 
Sbjct: 254 KREINHDLARLQEALLSDILGEKDIKVGDVYRGMSIIKRRLQRKKVLLILDNVDKGKQLQ 313

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
             +G  D +  GS++I+TTRD  LL +   + +  V+EVK+L    +L LFS +AF    
Sbjct: 314 AFVGGDDWYGSGSKIIVTTRDKHLLAS---NGIVKVYEVKQLKNEKALELFSWHAFKNKK 370

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
              G L+++   + Y  G+PLAL+                        P  DI ++LKVS
Sbjct: 371 NYPGHLDIAKRAVSYCQGLPLALE-----------------------SPSKDIHEILKVS 407

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
           YD L+++E+ IFLD ACFF   +   V   L    F A+ GI  L  KSL+ I +N  + 
Sbjct: 408 YDDLEEDEKGIFLDIACFFNSFEIGYVKEILYLHGFHAEDGIQELTDKSLMKIDTNGCVR 467

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGC 499
           MHDL+Q+MG EIVRQES  +P +RSRLW  +D++  L                  + G  
Sbjct: 468 MHDLIQDMGREIVRQESTLEPERRSRLWFSDDMHCSLK-----------------WCGAF 510

Query: 500 SNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL 559
             +K       N++ L ++       P  + N  +++D      SG  S S         
Sbjct: 511 GQMK-------NLKILIIRNARFSNSPQILPNCLKVLDW-----SGYPSSS--------- 549

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
                        LP E  N  +L  LNL E    K   S+K   +LS L  + CK L  
Sbjct: 550 -------------LPSEF-NPRNLAILNLHESRL-KWFQSLKVFERLSLLDFEGCKFLIE 594

Query: 620 LPEL---PCGSSIHARHCTSLKTLSNSSTLLTR 649
           +P L   P   ++   +CT+L  + +S   L R
Sbjct: 595 VPSLSRVPNLGALCLDYCTNLIRVHDSVGFLDR 627


>gi|15230525|ref|NP_190725.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572078|emb|CAB63021.1| propable disease resistance protein [Arabidopsis thaliana]
 gi|332645286|gb|AEE78807.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1226

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 219/769 (28%), Positives = 350/769 (45%), Gaps = 159/769 (20%)

Query: 2   ASSSSSINMIP-HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           ASSSS +  +P  P+H VF++FRG+++R++FVSHL +AL R  +  FID    +G  +  
Sbjct: 4   ASSSSEVKALPLPPQHQVFVNFRGEELRNSFVSHLRSALVRHGVNIFIDTNEEKGKPLH- 62

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
                IE S+I++ IFS  Y  S+WCLNELVK+ E  +K   +++P+FY V   +  Y  
Sbjct: 63  VFFQRIEESRIALAIFSVRYTESKWCLNELVKMKECMDKGKLLIIPIFYKVKAYEVRY-- 120

Query: 121 SLGWMGI------------------------------FDIPTSESVLIEGNVNDISKKLS 150
             G  G                               FD  + E   I G V ++ + LS
Sbjct: 121 QKGRFGCVFKNLRNVDVHKKNQWSEALSSVADRIGFSFDGKSDEHNFINGIVEEVKEALS 180

Query: 151 DLFPSDNKDQLV------------------GVESIIKEIESQLLSGSTEFNTVGIWGIGG 192
            +     KD  V                  G++  ++E++ +L     E   +G+ G+ G
Sbjct: 181 KILLDKTKDAFVYHSKNNSMSVGREKHEIYGLKQRLEELKEKLDLDCEETRILGVVGMPG 240

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG------------------GLANIHL 234
           IGKTT+A  IY  +   F     +Q+IR  S++ G                   + +   
Sbjct: 241 IGKTTLAREIYETLRCKFLRHGLIQDIRRTSKEHGLDCLPALLLEELLGVTIPDIESTRC 300

Query: 235 NFE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
            +E  +  L   KVL+V  D++D +QID+L+GR +    GSR++I T D  L+++     
Sbjct: 301 AYESYKMELHTHKVLVVLDDVSDKEQIDVLLGRCNWIRQGSRIVIATSDKSLIQD----V 356

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQN---HPAAGFLELSNIVIKYANGVPLALQVLGSY 349
             + + V +L++ D L  F R AF ++   H     ++LS   + Y  G PL L++LG+ 
Sbjct: 357 ADYTYVVPQLNHKDGLGHFGRYAFDRHSNIHNNEVIMKLSKEFVHYGRGHPLVLKLLGAD 416

Query: 350 LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
           L G  E+ W++ +  L       I+ VL+VSYD L    ++IFLD AC F+  D+  + +
Sbjct: 417 LNGKDEDHWKTKLATLAENSSHSIRDVLQVSYDELSQVHKDIFLDIAC-FRSEDESYIAS 475

Query: 410 FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
            LD+   +++  I  L+ K ++ +S +++ MHDLL     E+ R+   +D  +  RLWH 
Sbjct: 476 LLDSSEAASE--IKALMNKFMINVSEDRVEMHDLLYTFARELCRRAYAQDGREPHRLWHH 533

Query: 470 EDIYQVLN--ENTSLPTGI--NLDSLK-ELYLGGCS--------NLKRF---------PE 507
           +DI  VL   E  +   GI  N++ +K E+ L  C+         LK +         P 
Sbjct: 534 QDITDVLKNIEEGAEVRGIFLNMNEMKREMSLDSCTFKSMCGLRYLKIYSSHCPQQCKPN 593

Query: 508 ISCNIED---LDLKET--------AIEELPSSIGNLSRLVDLDL--------------TN 542
              N+ D     LKE          ++E+P    N   LVDL L               +
Sbjct: 594 NKINLPDGLNFPLKEVRYLHWLEFPLKEIPPDF-NPQNLVDLKLPHSKIERIWSDDKHKD 652

Query: 543 CSGLKSV----SSRLCNLKSLRR------LNLSGCLKLEKLPE------------EIGNL 580
              LK V    SS L ++  L +      LNL GC  L+ LPE               NL
Sbjct: 653 TPKLKWVNLSHSSNLWDISGLSKAQRLVFLNLKGCTSLKSLPEINLVSLEILILSNCSNL 712

Query: 581 -------ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
                  ++LE L L     +++P +   L +L  L ++ C +L+  P+
Sbjct: 713 KEFRVISQNLETLYLDGTSIKELPLNFNILQRLVILNMKGCAKLKEFPD 761



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 22/204 (10%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP  INL SL+ L L  CSNLK F  IS N+E L L  T+I+ELP +   L RLV L++
Sbjct: 692 SLPE-INLVSLEILILSNCSNLKEFRVISQNLETLYLDGTSIKELPLNFNILQRLVILNM 750

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-------------------EIGNLE 581
             C+ LK     L +LK+L+ L LS C KL+  P                    EI  + 
Sbjct: 751 KGCAKLKEFPDCLDDLKALKELILSDCWKLQNFPAICERIKVLEILRLDTTTITEIPMIS 810

Query: 582 SLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
           SL+ L L++ D    +P ++ QLS+L  L L+ CK L S+P+LP     + A  C SLKT
Sbjct: 811 SLQCLCLSKNDHISSLPDNISQLSQLKWLDLKYCKSLTSIPKLPPNLQHLDAHGCCSLKT 870

Query: 640 LSNSSTLLTRSSKHWDIFNFSNCS 663
           +SN    LT + + +  F  +NC+
Sbjct: 871 VSNPLACLTTAQQIYSTFILTNCN 894


>gi|7488170|pir||D71437 probable resistance gene - Arabidopsis thaliana
          Length = 2467

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 191/506 (37%), Positives = 265/506 (52%), Gaps = 57/506 (11%)

Query: 26   DVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRW 85
            DVR  F+SHL  AL R  I TF+D  + R   I+  L +AI  ++ISIVIFSE YASS W
Sbjct: 1145 DVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADELITAIREARISIVIFSENYASSTW 1204

Query: 86   CLNELVKILES-KNK-YGQIVVPVFYLVDPS------------------DAGYCPSLGWM 125
            CLNELV+I +  K+K   Q+V+PVFY VDPS                  D        W+
Sbjct: 1205 CLNELVEIHKCHKDKDLDQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKPEDQKQRWV 1264

Query: 126  -GIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQ 174
              + DI            SE+ ++    ND+S KL  L P    D LVG+E  I+ I+ +
Sbjct: 1265 KALTDISNLAGEDLRNGPSEAAMVVKIANDVSNKLFPL-PKGFGD-LVGIEDHIEAIKLK 1322

Query: 175  LLSGSTEFN-TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG----- 228
            L   S E    VGIWG  GIGK+TI  A++S +SS F    F+         V G     
Sbjct: 1323 LCLESKEARIMVGIWGQSGIGKSTIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSW 1382

Query: 229  ----LANI---------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
                L+ I         H     +RL   KVLI+  D+ +L+ +  L+G+ + F  GSR+
Sbjct: 1383 EKELLSEILGQKDIKIEHFGVVEQRLKHKKVLILLDDVDNLEFLRTLVGKAEWFGSGSRI 1442

Query: 276  IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
            I+ T+D QLLK H    +  ++EVK  S   +L +  + AFG+  P   F EL+  V K 
Sbjct: 1443 IVITQDRQLLKAHE---IDLIYEVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAKL 1499

Query: 336  ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
            A  +PL L VLGS LK  S+EEW   + +L+   + DI K L+VSY  LD ++Q+IF   
Sbjct: 1500 AGNLPLGLSVLGSSLKRRSKEEWMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQDIFHYI 1559

Query: 396  ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQ 454
            A  F G     + +FL     +  I +  L  KSL+ ++ N+ I MH+LLQ++  EI R+
Sbjct: 1560 AWLFNGWKVKSIKDFLGD-GVNVNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLATEIDRE 1618

Query: 455  ESIKDPGKRSRLWHPEDIYQVLNENT 480
            ES  +PGKR  L + E+I  V  +NT
Sbjct: 1619 ESNGNPGKRRFLENAEEILDVFTDNT 1644



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 172/527 (32%), Positives = 266/527 (50%), Gaps = 56/527 (10%)

Query: 137 LIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKT 196
           ++E   ND+S KL  +  S   D  VG+E+ I+ I+S L   S E   VGIWG  GIGK+
Sbjct: 1   MVEKISNDVSNKL--ITRSKCFDDFVGIEAHIEAIKSVLCLESKEARMVGIWGQSGIGKS 58

Query: 197 TIASAIYSNISSHFEGSYFMQNIRDESEKVGG---------LANI---------HLNFER 238
           TI  A++S +S  F    F+         V G         L+ I         H     
Sbjct: 59  TIGRALFSQLSIQFPLRAFLTYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVVE 118

Query: 239 RRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFE 298
           +RL   KVLI+  D+ +L+ +  L+G+ + F  GSR+I+ T+D Q LK H    +  V+E
Sbjct: 119 QRLKHKKVLILLDDVDNLEFLKTLVGKAEWFGSGSRIIVITQDRQFLKAHD---IDLVYE 175

Query: 299 VKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEW 358
           VK  S   +LT+  R+AFG++ P   F EL+  V K A  +PL L VLGS L+   ++EW
Sbjct: 176 VKLPSQGLALTMLCRSAFGKDSPPDDFKELAFEVAKLAGHLPLGLNVLGSSLRRRGKKEW 235

Query: 359 ESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA 418
              + +L+   + DI K L+VSYD L  ++Q+I+              V + L+      
Sbjct: 236 MEMMPRLRNGLNGDIMKTLRVSYDRLHQKDQDIY--------------VKDLLE-----D 276

Query: 419 KIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
            +G++ L  KSL+ I+ +  I MH+LL+++G EI R +S  +PGKR  L + EDI++V+ 
Sbjct: 277 NVGLTMLSEKSLIRITPDGHIEMHNLLEKLGREIDRAKSKGNPGKRQFLTNFEDIHEVVT 336

Query: 478 ENTSLPTGINLDSLKELYLGGCSNL---KRFPEISCNIEDLDLKETAIEELPSSIGNLS- 533
           E T   T + +    E Y      L   + F  +  N++ L + + +    P S+  L  
Sbjct: 337 EKTGTETLLGIRLPFEEYFSTRPLLIDKESFKGMR-NLQYLKIGDWSDGGQPQSLVYLPL 395

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL-SGCLKLEKLPEEIGNLESLEYLN-LAEK 591
           +L  LD  +C  LKS+ S     K+   +NL     KLEKL E    L SL+ +N L  K
Sbjct: 396 KLRLLDWDDCP-LKSLPS---TFKAEYLVNLIMKYSKLEKLWEGTLPLGSLKKMNLLCSK 451

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELPCGSSIHARHCTSL 637
           + ++IP  +     L +L L+ C+ L +LP  +     +   HC+ +
Sbjct: 452 NLKEIP-DLSNARNLEELDLEGCESLVTLPSSIQNAIKLRKLHCSGV 497



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 2/108 (1%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT +NL SL+ L L GCS+L+ FP IS +I+ L L+ TAIEE+   +   ++L  L L 
Sbjct: 769 LPTDVNLSSLETLDLSGCSSLRTFPLISKSIKWLYLENTAIEEI-LDLSKATKLESLILN 827

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
           NC  L ++ S + NL++LRRL +  C  LE LP ++ NL SL  L+L+
Sbjct: 828 NCKSLVTLPSTIGNLQNLRRLYMKRCTGLEVLPTDV-NLSSLGILDLS 874



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 28/139 (20%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LP  INL SL  ++L GCS+L+  P+IS +I  L+L +TAIEE+P    N SRL++L + 
Sbjct: 1969 LPMDINLSSLHTVHLKGCSSLRFIPQISKSIAVLNLDDTAIEEVP-CFENFSRLMELSMR 2027

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
             C             KSLRR              +I    S++ LNLA+   E++P  ++
Sbjct: 2028 GC-------------KSLRRF------------PQIST--SIQELNLADTAIEQVPCFIE 2060

Query: 602  QLSKLSDLRLQNCKRLQSL 620
            + S+L  L +  CK L+++
Sbjct: 2061 KFSRLKVLNMSGCKMLKNI 2079



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 55/86 (63%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            +P   N   L EL + GC +L+RFP+IS +I++L+L +TAIE++P  I   SRL  L+++
Sbjct: 2012 VPCFENFSRLMELSMRGCKSLRRFPQISTSIQELNLADTAIEQVPCFIEKFSRLKVLNMS 2071

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGC 567
             C  LK++S  +  L  L +++ + C
Sbjct: 2072 GCKMLKNISPNIFRLTRLMKVDFTDC 2097



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 83/174 (47%), Gaps = 14/174 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-ELPSSIGNLSRLVDLD 539
           S PT +NL+SL+ L L GC NL+ FP I     D+D  E   E  +     N +    LD
Sbjct: 608 SFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLD 667

Query: 540 LTNCSGLKSVSSRLCNLKS--LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKI 596
             +C     +    C  +   L  LN+  C K EKL E I +L SLE ++L+E ++  +I
Sbjct: 668 YLDC----LMRCMPCEFRPEYLVFLNVR-CYKHEKLWEGIQSLGSLEEMDLSESENLTEI 722

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNSSTL 646
           P  + + + L  L L NCK L +LP     L     +  + CT L+ L     L
Sbjct: 723 P-DLSKATNLKHLYLNNCKSLVTLPSTIGNLQKLVRLEMKECTGLEVLPTDVNL 775



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 44/186 (23%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEI-------------------------------- 508
            S P+ +N +SLK L L  C  L+ FPEI                                
Sbjct: 1811 SFPSPLNSESLKFLNLLLCPRLRNFPEIIMQSFIFTDEIEIEVADCLWNKNLPGLDYLDC 1870

Query: 509  --SCN--------IEDLDLK-ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
               CN        +++L ++    +E+L   + +L +L  +DL+ C  +  +   L    
Sbjct: 1871 LRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSECENMIEIPD-LSKAT 1929

Query: 558  SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
            +L  L+LS C  L  LP  IGNL+ L  LN+ E    K+      LS L  + L+ C  L
Sbjct: 1930 NLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDINLSSLHTVHLKGCSSL 1989

Query: 618  QSLPEL 623
            + +P++
Sbjct: 1990 RFIPQI 1995



 Score = 45.8 bits (107), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 15/87 (17%)

Query: 488 LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L  LK+++L G   LK  P++S  I   +L+E AI           +L+ LD+++C  L+
Sbjct: 562 LGRLKQMFLRGSKYLKEIPDLSLAI---NLEENAI-----------KLIYLDISDCKKLE 607

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           S  + L NL+SL  LNL+GC  L   P
Sbjct: 608 SFPTDL-NLESLEYLNLTGCPNLRNFP 633



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 22/156 (14%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKET-AIEELPSSIGNLSRLVD 537
           +LP G    SLK++ L    NLK  P++S   N+E+LDL+   ++  LPSSI N  +L  
Sbjct: 436 TLPLG----SLKKMNLLCSKNLKEIPDLSNARNLEELDLEGCESLVTLPSSIQNAIKLRK 491

Query: 538 LDLTNCSG-----LKSVSSRLCN-----LKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
           L   +CSG     LKS+   +C        S  RL L     L++L      +E L  L 
Sbjct: 492 L---HCSGVILIDLKSLEG-MCTQGIVYFPSKLRLLLWNNCPLKRLHSNF-KVEYLVKLR 546

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +   D EK+    + L +L  + L+  K L+ +P+L
Sbjct: 547 MENSDLEKLWDGTQPLGRLKQMFLRGSKYLKEIPDL 582


>gi|238478649|ref|NP_001154372.1| transmembrane receptors / ATP binding protein [Arabidopsis
           thaliana]
 gi|332192669|gb|AEE30790.1| transmembrane receptors / ATP binding protein [Arabidopsis
           thaliana]
          Length = 1384

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 211/725 (29%), Positives = 350/725 (48%), Gaps = 135/725 (18%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGN-EISPSLSSAIEGSKISIVI 75
           DVFLSF+ +D RH F   L   L +E++  + +D + RGN E+  SL  A+E S   +V+
Sbjct: 17  DVFLSFQ-RDARHKFTERLYEVLVKEQVRVWNNDDVERGNHELGASLVEAMEDSVALVVV 75

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDP---------------------- 113
            S  YA S WCL EL  + + K+  G++V+P+FY V+P                      
Sbjct: 76  LSPNYAKSHWCLEELAMLCDLKSSLGRLVLPIFYEVEPCMLRKQNGPYEMDFEEHSKRFS 135

Query: 114 --SDAGYCPSLGWMG-----IFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
                 +  +L  +G     ++   + +  +IE  V  +  +LS+  P    + +VG+ES
Sbjct: 136 EEKIQRWRRALNIIGNIPGFVYSKDSKDDDMIELVVKRVLAELSNT-PEKVGEFIVGLES 194

Query: 167 IIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEK 225
            +K++   +    S+    +G++G+GGIGKTT+A A Y+ I  +FE   F+ +IR+ S  
Sbjct: 195 PLKDLTGLIDTESSSGVQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAFISDIRERSSA 254

Query: 226 VGGLA------------------NIHLNFERRR--LSRMKVLIVFYDLTDLKQIDLLIGR 265
             GL                   ++ +  E+ +  +   K+++V  D+  + Q+  L+G 
Sbjct: 255 ENGLVTLQKTLIKELFRLVPEIEDVSIGLEKIKANVHEKKIIVVLDDVDHIDQVHALVGE 314

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGF 325
              +  G+ ++ITTRD ++L       V   +EVK L+   +L LFS ++  +  P    
Sbjct: 315 TRWYGQGTLIVITTRDSEILSKLS---VNQQYEVKCLTEPQALKLFSYHSLRKEEPTKNL 371

Query: 326 LELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           L LS  +++ +  +PLA++V GS L    EE +W++ ++KLK+    ++Q VL++S+  L
Sbjct: 372 LALSKKIVQISGLLPLAVEVFGSLLYDKKEEKDWQTQLDKLKKTQPGNLQDVLELSFKSL 431

Query: 385 DDEEQNIFLDTACFFK----GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI-SNNKIT 439
           DDEE+ +FLD AC F       D+ +++  L  C  +A+  +S L  KSLV I +N+ + 
Sbjct: 432 DDEEKKVFLDIACLFLKMEIKKDEVVIV--LKGCGLNAEAALSVLRQKSLVKILANDTLW 489

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGINLDSLKELYLG 497
           MHD +++MG ++V +ES +DPG RSRLW   +I  VLN  + TS   GI LD  K+    
Sbjct: 490 MHDQIRDMGRQMVLKESREDPGLRSRLWDRGEIMTVLNNMKGTSSIRGIVLDFKKKFARD 549

Query: 498 GCSN-----------------------LKRFP--------EISCNIED------------ 514
             ++                       L RFP        EI+  +E             
Sbjct: 550 PTADEIVSRNLRNNPGIYSVFNYLKNKLVRFPAEEKPKSSEITIPVESFAPMTKLRLLQI 609

Query: 515 ------------------LDLKETAIEELPSSIGNLSR-LVDLDLTNCSGLKSVSSRLCN 555
                             +  K   +E LP     L+R L  LDL+  SG++ V +    
Sbjct: 610 NNVELEGNLKLLPSELKWIQWKGCPLENLPPDF--LARQLSVLDLSE-SGIRQVQTLRNK 666

Query: 556 L--KSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQ 612
           +  ++L+ + L GC  LE +P ++ N E+LE L   +     K+P S+  L KL  L  +
Sbjct: 667 MVDENLKVVILRGCHSLEAIP-DLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFR 725

Query: 613 NCKRL 617
            C +L
Sbjct: 726 RCSKL 730



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 25/196 (12%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            L+ L EL +  C  LKR PE   +++ L    +KET + ELP S GNLS L+ L++    
Sbjct: 974  LEKLVELRMSNCKMLKRLPESFGDLKSLHRLYMKETLVSELPESFGNLSNLMVLEMLKKP 1033

Query: 545  GLKSVSSRLCNLKSLRRL-----NLSGCLKLE-----------KLPEEIGNLESLEYLNL 588
              +   S +       R      + S  LKLE           K+P+++  L  L  LNL
Sbjct: 1034 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNL 1093

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
                F  +PSS+ +LS L +L L++C+ L+ LP LPC    ++  +C SL+++S+ S L 
Sbjct: 1094 GNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELT 1153

Query: 648  TRSSKHWDIFNFSNCS 663
              +       N +NC+
Sbjct: 1154 ILTD-----LNLTNCA 1164



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 4/136 (2%)

Query: 489 DSLKELYLGGCSNLKRFPEISCN--IEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSG 545
           ++LK + L GC +L+  P++S +  +E L  ++ T + ++P S+GNL +L+ LD   CS 
Sbjct: 670 ENLKVVILRGCHSLEAIPDLSNHEALEKLVFEQCTLLVKVPKSVGNLRKLIHLDFRRCSK 729

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSK 605
           L      +  LK L +L LSGC  L  LPE IG + SL+ L L     + +P S+ +L  
Sbjct: 730 LSEFLVDVSGLKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQN 789

Query: 606 LSDLRLQNCKRLQSLP 621
           L  L L+ CK +Q LP
Sbjct: 790 LEILSLRGCK-IQELP 804



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 29/170 (17%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETAIEELPSSIGNLSRL 535
           +LP+ I +L +L++L+L  C++L + P+ S N    ++ L +  +A+EELP    +L  L
Sbjct: 825 NLPSSIGDLKNLQDLHLVRCTSLSKIPD-SINELKSLKKLFINGSAVEELPLKPSSLPSL 883

Query: 536 VDLDLTNCSGLKSVSS-----------------------RLCNLKSLRRLNLSGCLKLEK 572
            D    +C  LK V S                        +  L  +R L L  C  L+ 
Sbjct: 884 YDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKF 943

Query: 573 LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           LP+ IG++++L  LNL   + E++P    +L KL +LR+ NCK L+ LPE
Sbjct: 944 LPKSIGDMDTLYSLNLEGSNIEELPEEFGKLEKLVELRMSNCKMLKRLPE 993



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 25/159 (15%)

Query: 488 LDSLKELYLGGCSNLKRFPE---ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC- 543
           L  L++L+L GCS+L   PE      ++++L L  TAI+ LP SI  L  L  L L  C 
Sbjct: 740 LKLLEKLFLSGCSDLSVLPENIGAMTSLKELLLDGTAIKNLPESINRLQNLEILSLRGCK 799

Query: 544 ---------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
                                + LK++ S + +LK+L+ L+L  C  L K+P+ I  L+S
Sbjct: 800 IQELPLCIGTLKSLEKLYLDDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIPDSINELKS 859

Query: 583 LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           L+ L +     E++P     L  L D    +CK L+ +P
Sbjct: 860 LKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVP 898



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 481  SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            SLP+  + L +L+EL L  C  LKR P + C +E L+L      E  S +  L+ L DL+
Sbjct: 1100 SLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLN 1159

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            LTNC+ +  +   L +L +L+RL ++GC
Sbjct: 1160 LTNCAKVVDIPG-LEHLTALKRLYMTGC 1186



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 19/150 (12%)

Query: 498  GCSNLKRFPEIS------CNIEDLDLKETAIE-ELPSSIGNLSRLVDLDLTNCSGLKSVS 550
            G S   RF E+         +E+LD     I  ++P  +  LS L+ L+L N +   S+ 
Sbjct: 1044 GTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGN-NYFHSLP 1102

Query: 551  SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
            S L  L +L+ L+L  C +L++LP     LE L   NLA     +  S + +L+ L+DL 
Sbjct: 1103 SSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL---NLANCFSLESVSDLSELTILTDLN 1159

Query: 611  LQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            L NC ++  +P L         H T+LK L
Sbjct: 1160 LTNCAKVVDIPGL--------EHLTALKRL 1181


>gi|449524388|ref|XP_004169205.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 820

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 223/686 (32%), Positives = 340/686 (49%), Gaps = 113/686 (16%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVFLSFRG+D R NF SHLN AL +  I  FID+K++RG EIS SL  AIE SKI IVI 
Sbjct: 18  DVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKISRGEEISASLLEAIEKSKILIVII 77

Query: 77  SEGYASSRWCLNELVKILESKN-KYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSES 135
           SE YASS WCLNEL KI+     + GQ+V+P+FY VDP                   SE 
Sbjct: 78  SENYASSSWCLNELEKIIMCNELRSGQLVLPIFYRVDP-------------------SEV 118

Query: 136 VLIEGNVNDISKKLSDLFPSDN----KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIG 191
               G   +   +L   F SD     ++ ++ V  +      Q    S +++        
Sbjct: 119 RKQSGRFGEEFGRLEVRFSSDKMQAWREAMIYVSQMSGWPVLQEEEASNQYD-------- 170

Query: 192 GIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFY 251
             G   +   I  +I            + D S  V  L +I +N  R RL   K+L++  
Sbjct: 171 --GLVQLQKKILCDI------------LMDNSINVSNL-DIGVNIIRNRLCSKKILLILD 215

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+   +Q++ L G  D F  GS++I TTR++QLL +H  +++    +V  L+  + L LF
Sbjct: 216 DVDTREQLEALAGGHDWFGHGSKIIATTRNMQLLASHGFNKLE---KVNGLNAIEGLELF 272

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESAVNKLKRMP- 369
           S +AF   HP++ +L+LS   + Y   +PLAL+VLGS+L  + ++ ++E  +++ K    
Sbjct: 273 SWHAFNNCHPSSDYLDLSKRAVHYCKDLPLALEVLGSFLNSIHDQSKFERILDEYKNFYL 332

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGK 428
             DIQ +L++SYD L+ + ++IFL  +C F G D   V   L+AC     + G ++L+  
Sbjct: 333 DKDIQDILRISYDELEQDVKDIFLYISCCFVGEDINEVKMKLEACGCLCLEKGTTKLMNL 392

Query: 429 SLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL------ 482
           SL+TI +N+I MHDL+Q+MG  I   ++     KR RL   +D   VLN N         
Sbjct: 393 SLLTIESNRIKMHDLIQQMGRSIHLSKTFT-SHKRKRLLIKDDAMDVLNGNKEARAVKVI 451

Query: 483 ------PTGINLDS-----LKELYLGGCSNLK--------------------RFP----E 507
                 PT +++DS     +K L +    N+                     +FP     
Sbjct: 452 KLDFPRPTQLDIDSRAFEKVKNLVVLDVRNVTSSKGTDLEYLPSSIRWMNWPQFPFSYLH 511

Query: 508 ISCNIEDL---DLKETAIEELPSSIGNL----SRLVDLDLTNCSGLKSVSSRLCNLKSLR 560
            S  IE+L   +L  ++I++   ++  L      L +++L+    L  +   L    +L 
Sbjct: 512 TSFTIENLVKFNLPYSSIKKFGKALMVLIFCGEWLKEINLSYSKFLVEIPD-LTTAINLE 570

Query: 561 RLNLSGCLKLEKLPEEIGNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           +LNL GC KL K+ E +G+L  L   YL+ + + FEK PS +K L+ L  L       L+
Sbjct: 571 KLNLEGCEKLVKVHESVGSLSKLVEFYLSSSVEGFEKFPSCLK-LNSLEAL------SLE 623

Query: 619 SLPELPCG-SSIHARHCTSLKTLSNS 643
            + ++P G   +  R C SL    N+
Sbjct: 624 EILKVPKGVVRMDTRGCVSLAKFPNN 649


>gi|240256011|ref|NP_193686.5| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658792|gb|AEE84192.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1210

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 220/714 (30%), Positives = 324/714 (45%), Gaps = 162/714 (22%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           DVF+SFRG D RH+F SHL   L  + I+ F D KL RG E    L   IE SK+SIV+F
Sbjct: 58  DVFVSFRGADTRHDFTSHLVKYLRGKGIDVFSDAKL-RGGEYISLLFDRIEQSKMSIVVF 116

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPT---- 132
           SE YA+S WCL E+ KI++ + ++   V+P+FY V  SD     +  +  +F  PT    
Sbjct: 117 SEDYANSWWCLEEVGKIMQRRKEFNHGVLPIFYKVSKSDVSN-QTGSFEAVFQSPTKIFN 175

Query: 133 ----------------------------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                                       SE   ++  V +  + L++L P    D L G+
Sbjct: 176 GDEQKIEELKVALKTASNIRGFVYPENSSEPDFLDEIVKNTFRMLNELSPCVIPDDLPGI 235

Query: 165 ESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           ES  KE+E  L+  + E    VG+ G+ GIGKTT+A  +Y      F+G  F+++I D S
Sbjct: 236 ESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVYKQNFQRFDGYEFLEDIEDNS 295

Query: 224 EKVG-------------GLANIHLNFERRR---LSRMKVLIVFYDLTDLKQIDLLIGRLD 267
           ++ G                N+ +  + R    L   K+ IV  ++T+ KQI+ LIG+ +
Sbjct: 296 KRYGLPYLYQKLLHKLLDGENVDVRAQGRPENFLRNKKLFIVLDNVTEEKQIEYLIGKKN 355

Query: 268 GFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLE 327
            +  GSR++I TRD +LL+ +  +     + V  L+  +++ LF    FG ++P   F++
Sbjct: 356 VYRQGSRIVIITRDKKLLQKNADA----TYVVPRLNDREAMELFCLQVFGNHYPTEEFVD 411

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
           LSN  + YA G+PLAL++LG  L       W+  +  L+  P  ++QK LK SY  LDD+
Sbjct: 412 LSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEFLQVNPDKELQKELKSSYKALDDD 471

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEM 447
           ++++FLD ACFF                                     +I MHDLL  M
Sbjct: 472 QKSVFLDIACFF-------------------------------------RIEMHDLLHAM 494

Query: 448 GGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS-------------------LPTGIN- 487
           G EI +++SI+  G+R RLW+ +DI  +L  NT                     P     
Sbjct: 495 GKEIGKEKSIRKAGERRRLWNHKDIRDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTM 554

Query: 488 LDSLKEL--------------YLGGCSNLK-RFPE-----------ISCNIEDLDLKE-- 519
           L  LK L              ++  CS +   FP+             C   D D KE  
Sbjct: 555 LSKLKFLKFHSSHCSQWCDNDHIFQCSKVPDHFPDELVYLHWQGYPYDCLPSDFDPKELV 614

Query: 520 ------TAIEELPSSIGNLS--RLVDL----DLTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
                 + I++L     N    R VDL    DL N SGL          K+L RL+L GC
Sbjct: 615 DLSLRYSHIKQLWEDEKNTESLRWVDLGQSKDLLNLSGLSRA-------KNLERLDLEGC 667

Query: 568 LKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
             L+ L   +  +  L YLNL +    E +P   K +  L  L L  C +L+  
Sbjct: 668 TSLDLLG-SVKQMNELIYLNLRDCTSLESLPKGFK-IKSLKTLILSGCLKLKDF 719



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/145 (42%), Positives = 81/145 (55%), Gaps = 7/145 (4%)

Query: 470 EDIYQVLNENTSL---PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELP 526
           E IY  L + TSL   P G  + SLK L L GC  LK F  IS +IE L L+ TAIE + 
Sbjct: 681 ELIYLNLRDCTSLESLPKGFKIKSLKTLILSGCLKLKDFHIISESIESLHLEGTAIERVV 740

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
             I +L  L+ L+L NC  LK + + L  LKSL+ L LSGC  LE LP     +E LE L
Sbjct: 741 EHIESLHSLILLNLKNCEKLKYLPNDLYKLKSLQELVLSGCSALESLPPIKEKMECLEIL 800

Query: 587 NLAEKDFEKIPSSMKQLSKLSDLRL 611
            +     ++ P    ++S LS+L++
Sbjct: 801 LMDGTSIKQTP----EMSCLSNLKI 821



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 6/137 (4%)

Query: 487 NLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
           N +SL+ + LG   +L     +S   N+E LDL+     +L  S+  ++ L+ L+L +C+
Sbjct: 632 NTESLRWVDLGQSKDLLNLSGLSRAKNLERLDLEGCTSLDLLGSVKQMNELIYLNLRDCT 691

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+S+      +KSL+ L LSGCLKL+     I + ES+E L+L     E++   ++ L 
Sbjct: 692 SLESLPKGF-KIKSLKTLILSGCLKLKDF--HIIS-ESIESLHLEGTAIERVVEHIESLH 747

Query: 605 KLSDLRLQNCKRLQSLP 621
            L  L L+NC++L+ LP
Sbjct: 748 SLILLNLKNCEKLKYLP 764


>gi|297809509|ref|XP_002872638.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318475|gb|EFH48897.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 853

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 209/683 (30%), Positives = 324/683 (47%), Gaps = 109/683 (15%)

Query: 16  HDVFLSFR-GKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +DV + +R G  +  +F+SHL AALCR  I  F     N  +E+      A+   ++ I+
Sbjct: 29  YDVVIRYRRGDQINDDFISHLRAALCRRGISVF-----NEFDEVD-----AVPKCRVFII 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-----AGYCPSL------G 123
           + +  Y  S      L+ ILE +    Q V P+FY + P D       Y           
Sbjct: 79  LLTSTYVPS-----NLLNILEHQQTEYQAVYPIFYRLSPYDLISNSKNYERYFLQNEPER 133

Query: 124 WMG----IFDIP------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIES 173
           W      I  +P       SES LI+  V D  K L     S +K  ++G++  ++EI S
Sbjct: 134 WQAALKEISQMPGYTLTDRSESELIDEIVRDALKVLC----SGDKVNMIGMDIQVEEILS 189

Query: 174 QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG----- 228
            L   S +  ++GIWG  GIGKTTIA  I+  IS  +E   F++++  E E  G      
Sbjct: 190 LLCIESLDVRSIGIWGTVGIGKTTIAEEIFRRISVQYETCVFLKDLHKEVEVKGHDAVRE 249

Query: 229 ---------------LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGS 273
                          +++I  +F R RL R ++L++  D+ D + +   +G+L+ F PGS
Sbjct: 250 DFLSRVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVGTFLGKLNYFGPGS 309

Query: 274 RVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVI 333
           R+I+T+R+ ++       ++ HV+EVK L    S+ L  R  F        +  LS  ++
Sbjct: 310 RIIMTSRNRRVFV---LCKIDHVYEVKPLDIPTSVRLLDRGTFQIVLSPEVYKTLSLELV 366

Query: 334 KYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFL 393
           K++NG P  LQ L S      + E      ++K    + I  + + S  GLDD E++IFL
Sbjct: 367 KFSNGNPQVLQFLSSV-----DRERNRLSQEVKTTSPIYIPGIFERSCCGLDDNERSIFL 421

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIV 452
           D ACFF   D+  V   LD C FS  +G   LV KSL+TIS +N + M   +Q  G EIV
Sbjct: 422 DIACFFNRMDKDNVAMLLDGCGFSTHVGFRGLVDKSLLTISQHNFVDMLSFIQATGREIV 481

Query: 453 RQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKELYLGGCSNLKRFPEISC 510
           RQES   PG RSRLW+ EDI  V   +  T+   GI LD  K+ +    +  ++     C
Sbjct: 482 RQESADRPGDRSRLWNAEDIRDVFINDTGTTAIEGIFLDMSKQTFDANPNVFEKM----C 537

Query: 511 NIEDLDLKETAIEE------------LPSSIG----------------NLSRLVDLDLTN 542
           N+  L L  + +EE            LPS +                 N   LV+L+L++
Sbjct: 538 NLRLLKLYCSKVEEKHGVYFPQGLEYLPSKLRLLHWEFYPLSSLPESFNPENLVELNLSS 597

Query: 543 CSG---LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPS 598
                  K   +R  +L +L+++ LS   +L K+P  + +  +LE+++L        I  
Sbjct: 598 SCARKLWKGKKARFLSLGNLKKMKLSYSYQLTKIP-RLSSAPNLEHIDLEGCNSLLSISQ 656

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L K+  L L+ C +L+S+P
Sbjct: 657 SVSYLKKIVFLNLKGCSKLESIP 679



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 93/142 (65%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           S+P+ ++L+SL+ L L GCS L+ FPEIS N+++L +  T I+E+PSSI NL  L  LDL
Sbjct: 677 SIPSTVDLESLEVLNLSGCSKLENFPEISPNVKELYMGGTMIQEVPSSIKNLVLLEKLDL 736

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            N   LK++ + +C LK L  LNLSGC  LE+ P+    ++ L +L+L+     ++PSS+
Sbjct: 737 ENSRHLKNLPTSICKLKHLETLNLSGCTSLERFPDLSRRMKCLRFLDLSRTAVRELPSSI 796

Query: 601 KQLSKLSDLRLQNCKRLQSLPE 622
             L+ L +LR  +CK L  LP+
Sbjct: 797 SYLTALEELRFVDCKNLVRLPD 818



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 93/166 (56%), Gaps = 11/166 (6%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTN 542
           ++L +LK++ L     L + P +S   N+E +DL+   ++  +  S+  L ++V L+L  
Sbjct: 612 LSLGNLKKMKLSYSYQLTKIPRLSSAPNLEHIDLEGCNSLLSISQSVSYLKKIVFLNLKG 671

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           CS L+S+ S + +L+SL  LNLSGC KLE  PE   N++ L    +     +++PSS+K 
Sbjct: 672 CSKLESIPSTV-DLESLEVLNLSGCSKLENFPEISPNVKEL---YMGGTMIQEVPSSIKN 727

Query: 603 LSKLSDLRLQNCKRLQSLPELPCG----SSIHARHCTSLKTLSNSS 644
           L  L  L L+N + L++LP   C      +++   CTSL+   + S
Sbjct: 728 LVLLEKLDLENSRHLKNLPTSICKLKHLETLNLSGCTSLERFPDLS 773


>gi|30694677|ref|NP_199318.2| putative WRKY transcription factor 16 [Arabidopsis thaliana]
 gi|332007812|gb|AED95195.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
          Length = 1344

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 213/679 (31%), Positives = 336/679 (49%), Gaps = 83/679 (12%)

Query: 25  KDVRHNFVSHLNAALCREKI-ETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASS 83
           ++VR++FVSHL+ AL R+ + + FID   +  NE      S +E +++S++I       S
Sbjct: 14  EEVRYSFVSHLSKALQRKGVNDVFIDSDDSLSNESQ----SMVERARVSVMILPGNRTVS 69

Query: 84  RWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDI-----PTSESVLI 138
              L++LVK+L+ +    Q+VVPV Y V  S+  +  +L   G   +       S+S L+
Sbjct: 70  ---LDKLVKVLDCQKNKDQVVVPVLYGVRSSETEWLSALDSKGFSSVHHSRKECSDSQLV 126

Query: 139 EGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTI 198
           +  V D+ +KL  +       + +G+ S + EIE  +     +   VGIWG+ GIGKTT+
Sbjct: 127 KETVRDVYEKLFYM-------ERIGIYSKLLEIEKMINKQPLDIRCVGIWGMPGIGKTTL 179

Query: 199 ASAIYSNISSHFEGSYFMQN----IRDE-----------SEKVGGLANI-HLNFERRRLS 242
           A A++  +S  F+   F+++    I+++            E  G    +  L+  R RL+
Sbjct: 180 AKAVFDQMSGEFDAHCFIEDYTKAIQEKGVYCLLEEQFLKENAGASGTVTKLSLLRDRLN 239

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             +VL+V  D+     ++  +G  D F P S +IIT++D  +    R  RV  ++EV+ L
Sbjct: 240 NKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVF---RLCRVNQIYEVQGL 296

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESA 361
           +  ++L LFS  A   +       E+S  VIKYANG PLAL + G  L G     E E A
Sbjct: 297 NEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLALNLYGRELMGKKRPPEMEIA 356

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
             KLK  P       +K SYD L+D E+NIFLD ACFF+G +   VM  L+ C F   +G
Sbjct: 357 FLKLKECPPAIFVDAIKSSYDTLNDREKNIFLDIACFFQGENVDYVMQLLEGCGFFPHVG 416

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL----- 476
           I  LV KSLVTIS N++ MH+L+Q++G +I+ +E+ +   +RSRLW P  I  +L     
Sbjct: 417 IDVLVEKSLVTISENRVRMHNLIQDVGRQIINRET-RQTKRRSRLWEPCSIKYLLEDKEQ 475

Query: 477 NENTSLPTGINLDSLKELYLG---GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           NEN    T      + E   G     SNL             D+K  A +    ++ NL 
Sbjct: 476 NENEEQKTTFERAQVPEEIEGMFLDTSNLS-----------FDIKHVAFD----NMLNL- 519

Query: 534 RLVDLDLTNC------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
           RL  +  +N       + LK   S L N+  LR L+      L+ LP+    +  +E +N
Sbjct: 520 RLFKIYSSNPEVHHVNNFLKGSLSSLPNV--LRLLHWEN-YPLQFLPQNFDPIHLVE-IN 575

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTLSNSS 644
           +     +K+    K L  L  +RL + ++L  + +L    ++     + CT L++   + 
Sbjct: 576 MPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVVDLQGCTRLQSFPATG 635

Query: 645 TLLTRSSKHWDIFNFSNCS 663
            LL     H  + N S C+
Sbjct: 636 QLL-----HLRVVNLSGCT 649



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 15/135 (11%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEEL--------------P 526
           S P    L  L+ + L GC+ +K FPEI  NIE L+L+ T +  L               
Sbjct: 630 SFPATGQLLHLRVVNLSGCTEIKSFPEIPPNIETLNLQGTGVSNLEQSDLKPLTSLMKIS 689

Query: 527 SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
           +S  N  +L  L+L +CS L+S+ + + NL+ L+ L+LSGC +LE +     NL+ L  +
Sbjct: 690 TSYQNPGKLSCLELNDCSRLRSLPN-MVNLELLKALDLSGCSELETIQGFPRNLKELYLV 748

Query: 587 NLAEKDFEKIPSSMK 601
             A +   ++P S++
Sbjct: 749 GTAVRQVPQLPQSLE 763



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 12/97 (12%)

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL-----NLAEKD 592
           +DL  C+ L+S  +    L  LR +NLSGC +++  PE   N+E+L        NL + D
Sbjct: 620 VDLQGCTRLQSFPA-TGQLLHLRVVNLSGCTEIKSFPEIPPNIETLNLQGTGVSNLEQSD 678

Query: 593 FE------KIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            +      KI +S +   KLS L L +C RL+SLP +
Sbjct: 679 LKPLTSLMKISTSYQNPGKLSCLELNDCSRLRSLPNM 715



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)

Query: 374  QKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKS 429
            ++VL+V Y GL +  + +FL  A  F   D      L+ N +D        G+  L  +S
Sbjct: 1020 EEVLRVRYAGLQEIYKALFLYIAGLFNDEDVGLVAPLIANIID---MDVSYGLKVLAYRS 1076

Query: 430  LVTISNN-KITMHDLLQEMGGEIVRQESIK 458
            L+ +S+N +I MH LL++MG EI+  ES K
Sbjct: 1077 LIRVSSNGEIVMHYLLRQMGKEILHTESKK 1106


>gi|30694675|ref|NP_851133.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
 gi|29839627|sp|Q9FL92.1|WRK16_ARATH RecName: Full=Probable WRKY transcription factor 16; AltName:
           Full=WRKY DNA-binding protein 16
 gi|10177497|dbj|BAB10888.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007811|gb|AED95194.1| putative WRKY transcription factor 16 [Arabidopsis thaliana]
          Length = 1372

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 213/679 (31%), Positives = 336/679 (49%), Gaps = 83/679 (12%)

Query: 25  KDVRHNFVSHLNAALCREKI-ETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASS 83
           ++VR++FVSHL+ AL R+ + + FID   +  NE      S +E +++S++I       S
Sbjct: 14  EEVRYSFVSHLSKALQRKGVNDVFIDSDDSLSNESQ----SMVERARVSVMILPGNRTVS 69

Query: 84  RWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDI-----PTSESVLI 138
              L++LVK+L+ +    Q+VVPV Y V  S+  +  +L   G   +       S+S L+
Sbjct: 70  ---LDKLVKVLDCQKNKDQVVVPVLYGVRSSETEWLSALDSKGFSSVHHSRKECSDSQLV 126

Query: 139 EGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTI 198
           +  V D+ +KL  +       + +G+ S + EIE  +     +   VGIWG+ GIGKTT+
Sbjct: 127 KETVRDVYEKLFYM-------ERIGIYSKLLEIEKMINKQPLDIRCVGIWGMPGIGKTTL 179

Query: 199 ASAIYSNISSHFEGSYFMQN----IRDE-----------SEKVGGLANI-HLNFERRRLS 242
           A A++  +S  F+   F+++    I+++            E  G    +  L+  R RL+
Sbjct: 180 AKAVFDQMSGEFDAHCFIEDYTKAIQEKGVYCLLEEQFLKENAGASGTVTKLSLLRDRLN 239

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             +VL+V  D+     ++  +G  D F P S +IIT++D  +    R  RV  ++EV+ L
Sbjct: 240 NKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVF---RLCRVNQIYEVQGL 296

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEE-EWESA 361
           +  ++L LFS  A   +       E+S  VIKYANG PLAL + G  L G     E E A
Sbjct: 297 NEKEALQLFSLCASIDDMAEQNLHEVSMKVIKYANGHPLALNLYGRELMGKKRPPEMEIA 356

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
             KLK  P       +K SYD L+D E+NIFLD ACFF+G +   VM  L+ C F   +G
Sbjct: 357 FLKLKECPPAIFVDAIKSSYDTLNDREKNIFLDIACFFQGENVDYVMQLLEGCGFFPHVG 416

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL----- 476
           I  LV KSLVTIS N++ MH+L+Q++G +I+ +E+ +   +RSRLW P  I  +L     
Sbjct: 417 IDVLVEKSLVTISENRVRMHNLIQDVGRQIINRET-RQTKRRSRLWEPCSIKYLLEDKEQ 475

Query: 477 NENTSLPTGINLDSLKELYLG---GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           NEN    T      + E   G     SNL             D+K  A +    ++ NL 
Sbjct: 476 NENEEQKTTFERAQVPEEIEGMFLDTSNLS-----------FDIKHVAFD----NMLNL- 519

Query: 534 RLVDLDLTNC------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN 587
           RL  +  +N       + LK   S L N+  LR L+      L+ LP+    +  +E +N
Sbjct: 520 RLFKIYSSNPEVHHVNNFLKGSLSSLPNV--LRLLHWEN-YPLQFLPQNFDPIHLVE-IN 575

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA---RHCTSLKTLSNSS 644
           +     +K+    K L  L  +RL + ++L  + +L    ++     + CT L++   + 
Sbjct: 576 MPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVVDLQGCTRLQSFPATG 635

Query: 645 TLLTRSSKHWDIFNFSNCS 663
            LL     H  + N S C+
Sbjct: 636 QLL-----HLRVVNLSGCT 649



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 37/205 (18%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI----------- 529
           S P    L  L+ + L GC+ +K FPEI  NIE L+L+ T I ELP SI           
Sbjct: 630 SFPATGQLLHLRVVNLSGCTEIKSFPEIPPNIETLNLQGTGIIELPLSIVKPNYRELLNL 689

Query: 530 -------GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
                    +S L   DL   + L  +S+   N   L  L L+ C +L  LP  + NLE 
Sbjct: 690 LAEIPGLSGVSNLEQSDLKPLTSLMKISTSYQNPGKLSCLELNDCSRLRSLPNMV-NLEL 748

Query: 583 LEYLNLAE----KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSL 637
           L+ L+L+     +  +  P ++K+L  +          ++ +P+LP        H C SL
Sbjct: 749 LKALDLSGCSELETIQGFPRNLKELYLVG-------TAVRQVPQLPQSLEFFNAHGCVSL 801

Query: 638 KTLSNSSTLLTRSSKHWDIFNFSNC 662
           K++      L         + FSNC
Sbjct: 802 KSIRLDFKKLPVH------YTFSNC 820



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)

Query: 374  QKVLKVSYDGLDDEEQNIFLDTACFFKGND----QYLVMNFLDACRFSAKIGISRLVGKS 429
            ++VL+V Y GL +  + +FL  A  F   D      L+ N +D        G+  L  +S
Sbjct: 1048 EEVLRVRYAGLQEIYKALFLYIAGLFNDEDVGLVAPLIANIID---MDVSYGLKVLAYRS 1104

Query: 430  LVTISNN-KITMHDLLQEMGGEIVRQESIK 458
            L+ +S+N +I MH LL++MG EI+  ES K
Sbjct: 1105 LIRVSSNGEIVMHYLLRQMGKEILHTESKK 1134


>gi|227438211|gb|ACP30595.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 707

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 181/515 (35%), Positives = 267/515 (51%), Gaps = 74/515 (14%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SFRG+DVR++F+SHL   L R  I TFID  ++R   I   L  AI+ S+I+IV
Sbjct: 14  RYHVFPSFRGEDVRNSFLSHL-MELERNLITTFIDHGIDRSRPIGSELLLAIKESRIAIV 72

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------- 115
           IFS+ YASS WCLNELV+I +      Q+V+P+FY VDPSD                   
Sbjct: 73  IFSKNYASSTWCLNELVEIHKCFKDLNQMVIPIFYHVDPSDVRKQTGEFGDRFKEICMDK 132

Query: 116 ------------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDN 157
                             AG   S  W+G       E+ +IE    D+  K+  + PS++
Sbjct: 133 TEDEIERLVRALTDVANLAGQ-DSKNWIG-----EGEAKMIEHIAKDVFNKV--MIPSND 184

Query: 158 KDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFM- 216
               VG+E+  + + + L   S E   VGIWG  GIGK+TI   ++S +SS F    F+ 
Sbjct: 185 FSDFVGIEAHFQRLNNLLCLESEEVRKVGIWGPSGIGKSTIGRVLFSQLSSRFHHHAFVS 244

Query: 217 ----QNIRDESEKVG-------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
               +   D S K+               L   HL   ++ L+  KVLI+  D+ DL+ +
Sbjct: 245 YKSTKQWDDYSMKLSLDERLLSEISCQKDLKISHLGVVKQMLNHKKVLIIVDDVDDLEVL 304

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           +  + +      GSR+I+ T+D +LLK+     +  ++EV+  SY+ ++ +F R AFG+N
Sbjct: 305 NTFMDQTRLVGSGSRIIVITQDRKLLKSQ---EIELIYEVELPSYDLAIQMFCRYAFGKN 361

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
            P  GF EL+  V  +++ +PL L VLGS LKGM++EEW   + +L       I+  LKV
Sbjct: 362 SPPYGFEELTEEVALHSSNLPLGLSVLGSSLKGMTKEEWVEMLPRLLNSLDGKIKNTLKV 421

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-I 438
            YD LD +EQ +FL  AC   G +   + + L     SA+IG+  L  KSL+   + + +
Sbjct: 422 CYDRLDVKEQELFLWIACLSDGPNVSFLKDLLGD---SAEIGLKILNDKSLIRRESTEFV 478

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
            MH LLQ++G EI R + I +   R  L   E IY
Sbjct: 479 RMHSLLQKLGKEINRADPINN---RRFLTEAERIY 510



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 7/159 (4%)

Query: 316 FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK 375
            G+     GF EL+  V  +++ +PL L VLGS LKGM++EEW   + +L       I+ 
Sbjct: 545 LGKTLXXYGFEELTEEVALHSSNLPLGLSVLGSSLKGMTKEEWVEMLPRLLNSLDGKIKN 604

Query: 376 VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISN 435
            LKV YD LD +EQ +FL  AC   G +   + + L     SA+IG+  L  KSL+   +
Sbjct: 605 TLKVCYDRLDVKEQELFLWIACLSDGPNVSFLKDLLGD---SAEIGLKILNDKSLIRRES 661

Query: 436 NK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
            + + MH LLQ++G EI R + I +   R  L   E IY
Sbjct: 662 TEFVRMHSLLQKLGKEINRADPINN---RRFLTEAERIY 697


>gi|359486120|ref|XP_003633392.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1218

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 188/511 (36%), Positives = 253/511 (49%), Gaps = 113/511 (22%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R+NF  HL +AL R  I TF DDKL RG  I+P L  AIE S+ S+++
Sbjct: 24  YDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDKLRRGEVIAPELLKAIEESRSSVIV 83

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS-----DAGYCPSLG------- 123
           FSE YA SRWCL+ELVKI+E +   G  V P+FY VDPS     +  +  +         
Sbjct: 84  FSENYARSRWCLDELVKIMECQKDLGHAVFPIFYHVDPSHVRKQEGSFGEAFARYEENWK 143

Query: 124 -----WM----------GIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESII 168
                W           G   +   ES  I+   N+I ++L +    D    LVG++S +
Sbjct: 144 DKIPRWRRALTEAANLSGWHPLDGYESDYIKEITNNIFRRL-NCKRLDVDANLVGIDSRV 202

Query: 169 KEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG 228
           KE+  +L   S++   VGI+G+GGIGKTTIA  IY+ +   FE   F++NIR  S    G
Sbjct: 203 KEVSLRLHMESSDVRIVGIYGVGGIGKTTIAKVIYNELCCEFEYMSFLENIRGIS-NTKG 261

Query: 229 LANIH-------LNFERRR---------------LSRMKVLIVFYDLTDLKQIDLLIGRL 266
           L ++        L  ER +               LS   V IV  D+ D  Q+  L+   
Sbjct: 262 LTHLQNQLLGDILEKERSQNINIVDRGASMIGTILSSKTVFIVLDDVDDRNQLKALLRHC 321

Query: 267 DGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFL 326
                GSRVIITTR+  LL      +V  ++EV+ L+  ++  LFS +AF QN P + F+
Sbjct: 322 GWLGKGSRVIITTRNKHLLIEQ---KVDELYEVEGLNSKEACELFSLHAFKQNLPKSDFI 378

Query: 327 ELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDD 386
            LS  ++ Y  G+PLAL+VL                      P  +I KVLK SYDGLD 
Sbjct: 379 NLSWRMVDYCQGLPLALEVLE---------------------PVPEIHKVLKSSYDGLDL 417

Query: 387 EEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQE 446
            E++I LD ACFFKG                                      MHDL+Q+
Sbjct: 418 TEKDILLDVACFFKG--------------------------------------MHDLIQQ 439

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLN 477
           M  +IVR+   K+P K SRLW P DI + L 
Sbjct: 440 MCWKIVRENFPKEPDKWSRLWDPHDIERALT 470



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 26/167 (15%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
            LP+ I+L+S++ L L  CS  ++FPE   N++   DL L+ T I+ELP+ I N   L  L
Sbjct: 906  LPSSIDLESVEILDLSDCSKFEKFPENGANMKSLYDLSLENTVIKELPTGIANWESLQTL 965

Query: 539  DLTNC-----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            DL++C                       + +K +   + +L+SL+ L+LS C K EK PE
Sbjct: 966  DLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKDLPDSIGDLESLKILDLSYCSKFEKFPE 1025

Query: 576  EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            + GN++SL  LNL     + +P S+  L  L  L L  C + +  PE
Sbjct: 1026 KGGNMKSLWKLNLKNTAIKDLPDSIGDLESLVSLDLSKCSKFEKFPE 1072



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 88/168 (52%), Gaps = 27/168 (16%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
            LP  I +L+SLK L L  CS  ++FPE   N++ L   +LK TAI++LP SIG+L  LV 
Sbjct: 999  LPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTAIKDLPDSIGDLESLVS 1058

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRL-----------------------NLSGCLKLEKLP 574
            LDL+ CS  +    +  N+KSL+RL                       +LS C K EK P
Sbjct: 1059 LDLSKCSKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEILDLSKCSKFEKFP 1118

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            ++ GN++SL+ L +     + +P S+  L  L  L L  C + +  PE
Sbjct: 1119 KKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLKILDLSYCSKFEKFPE 1166



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 89/181 (49%), Gaps = 30/181 (16%)

Query: 472  IYQVLNENT---SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEE 524
            +Y +  ENT    LPTGI N +SL+ L L  C   ++FPE   N++ L       TAI++
Sbjct: 939  LYDLSLENTVIKELPTGIANWESLQTLDLSSCLKFEKFPEKGGNMKSLKKLCFNGTAIKD 998

Query: 525  LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNL-------------------- 564
            LP SIG+L  L  LDL+ CS  +    +  N+KSL +LNL                    
Sbjct: 999  LPDSIGDLESLKILDLSYCSKFEKFPEKGGNMKSLWKLNLKNTAIKDLPDSIGDLESLVS 1058

Query: 565  ---SGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
               S C K EK PE+ GN++SL+ L L     + +P S+  L  L  L L  C + +  P
Sbjct: 1059 LDLSKCSKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEILDLSKCSKFEKFP 1118

Query: 622  E 622
            +
Sbjct: 1119 K 1119



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 76/149 (51%), Gaps = 27/149 (18%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
            LP  I +L+SL  L L  CS  ++FPE   N++ L    L  TAI++LP SIG+L  L  
Sbjct: 1046 LPDSIGDLESLVSLDLSKCSKFEKFPEKGGNMKSLKRLYLNNTAIKDLPDSIGDLESLEI 1105

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRL-----------------------NLSGCLKLEKLP 574
            LDL+ CS  +    +  N+KSL+RL                       +LS C K EK P
Sbjct: 1106 LDLSKCSKFEKFPKKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLKILDLSYCSKFEKFP 1165

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
            E+ GN++SL+ L L     + +P S+  L
Sbjct: 1166 EKGGNMKSLKQLYLINTAIKDLPDSIGDL 1194



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 4/139 (2%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNC 543
           +L+SLK + L   + L + PE S   N+E+L LK   ++ ++  S+G L +   L+LT+C
Sbjct: 794 DLESLKVIDLSHSNKLVQMPEFSSMPNLEELILKGCVSLIDIHPSVGVLKKFTTLNLTSC 853

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
             LK + S + NL++L  L L+ C   +K  E  GN++SL++L L +    ++PSS+  L
Sbjct: 854 VKLKGLPSSISNLEALECLYLTRCSSFDKFSEIQGNMKSLKFLYLRKTAIRELPSSI-DL 912

Query: 604 SKLSDLRLQNCKRLQSLPE 622
             +  L L +C + +  PE
Sbjct: 913 ESVEILDLSDCSKFEKFPE 931



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 5/109 (4%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
            LP  I +L+SL+ L L  CS  ++FP+   N++ L    +K TAI++LP SIG+L  L  
Sbjct: 1093 LPDSIGDLESLEILDLSKCSKFEKFPKKGGNMKSLKRLYVKNTAIKDLPDSIGDLESLKI 1152

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
            LDL+ CS  +    +  N+KSL++L L     ++ LP+ IG+LE+  Y+
Sbjct: 1153 LDLSYCSKFEKFPEKGGNMKSLKQLYLINT-AIKDLPDSIGDLEANIYI 1200


>gi|227438129|gb|ACP30554.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1035

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 210/678 (30%), Positives = 333/678 (49%), Gaps = 112/678 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R   VSHL AAL    I TF DD +L +G+ IS  L  A++GS  ++
Sbjct: 15  KYDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEKGDHISDQLHIALKGSSFAV 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLG---------- 123
           V+ SE YA+SRWCL EL  I+E   +    V PVFY VDPS   +   LG          
Sbjct: 75  VVLSENYATSRWCLMELQLIMEYMKEGTLEVFPVFYGVDPSTVRH--QLGSFSLERYKGR 132

Query: 124 ---------WMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
                    W     +  +           E+V++     DIS++++ L    +   +VG
Sbjct: 133 PEMVHKVHKWREALHLIANLSGLDSRHCVDEAVMVGEIARDISRRVT-LMQKIDSGNIVG 191

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +++ ++ +   L   S E   +GIWG+GGIGKT+IA  +Y  IS  F    F++NI+  S
Sbjct: 192 MKAHMEGLNHLLDLESNEVVVLGIWGMGGIGKTSIAKCLYDQISPRFRARCFIENIKSVS 251

Query: 224 EKVGGLANIHLNFERRRLSRMKVLIVFYDLT------DLKQIDLLIGRLDGFVPGSRVII 277
           ++       H +  +     M   I+  D++       L Q+  L    + F PGSR+II
Sbjct: 252 KE-------HDHDLKHFQKEMLCSILSDDISLWSVEAGLAQVHALAKEKNWFGPGSRIII 304

Query: 278 TTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYAN 337
           TTRD+ LL       V +V+EV  L+  D+L +F + AF    P  GF +LS    + ++
Sbjct: 305 TTRDMGLLNT---CGVENVYEVNCLNDKDALKMFKQIAFEGPPPCDGFEQLSIRATRLSH 361

Query: 338 GVPLALQVLGSYLKG--MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
           G+P A+Q    +L+G   + E WE A+  L+     +  ++LK+SY+GL    QN+FL  
Sbjct: 362 GLPSAIQAHALFLRGRTAAPEVWEEALTALESSLDENTMEILKISYEGLPKPHQNVFLHV 421

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQEMGGEIVRQ 454
           AC F G+    + + L      + + I  L  KSL+ IS N  + MH L+++M  E++R 
Sbjct: 422 ACLFNGDTLQRINSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIMHKLVEQMAREMIRD 481

Query: 455 ESIKDPGKRSRLWHPEDI-YQVLN-----ENTSLPT--GINLD---SLKELYLGGCSNLK 503
           ++      R  L  P+DI Y + N     E T   +    NL    S+K   +G   NLK
Sbjct: 482 DT---SLARKFLRDPQDICYALTNFRDGGEQTECMSLHSCNLACAFSMKASVVGHMHNLK 538

Query: 504 RFPEISCNIEDLDLKETAIEE---LPSSI----------------GNLSRLVDLDLTNCS 544
            F ++  +++  + K   I +   LP S+                 +   LV+L+L + S
Sbjct: 539 -FLKVYKHVDSRESKLQLIPDQHLLPPSLRLFHWDAFPLRTLPSDADPYFLVELNLRH-S 596

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+++ S    L+SL+RL+++G   L++LP+                        + +++
Sbjct: 597 DLRTLWSGTPMLESLKRLDVTGSKHLKQLPD------------------------LSRIT 632

Query: 605 KLSDLRLQNCKRLQSLPE 622
            L +L L++C RL+ +PE
Sbjct: 633 SLDELALEHCTRLKGIPE 650



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 26/153 (16%)

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSS-------RLCNLKSLR---- 560
           IE LDL     E LP ++ +L+RL  L L NC  LK +          L N ++LR    
Sbjct: 807 IEKLDLSGNDFENLPEAMVSLTRLKTLWLRNCFKLKELPKLTQVQTLTLTNCRNLRSLVK 866

Query: 561 --------------RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                          L L  C  +E L +++     L  L+L+  +F  +PSS++ L+ L
Sbjct: 867 LSETSEEQGRYCLLELCLENCNNVEFLSDQLVYFIKLTNLDLSGHEFVALPSSIRDLTSL 926

Query: 607 SDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK 638
             L L NCK L+S+ +LP     + A  C SL+
Sbjct: 927 VTLCLNNCKNLRSVEKLPLSLQFLDAHGCDSLE 959



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 7/89 (7%)

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEY---LNLAEKDFEKIPSSMKQLSKLSDLRL 611
           +LK L+ +NL+    + K+P  +  +  LE+   L+L+  DFE +P +M  L++L  L L
Sbjct: 780 DLKELKLVNLN----IRKIPSGVHGIHKLEFIEKLDLSGNDFENLPEAMVSLTRLKTLWL 835

Query: 612 QNCKRLQSLPELPCGSSIHARHCTSLKTL 640
           +NC +L+ LP+L    ++   +C +L++L
Sbjct: 836 RNCFKLKELPKLTQVQTLTLTNCRNLRSL 864


>gi|356553715|ref|XP_003545198.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1127

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 234/761 (30%), Positives = 357/761 (46%), Gaps = 145/761 (19%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETF-IDDKLNRGNEISPSLSSAIEGSKISIV 74
           + VFLSFR +    +F + L  +L R  I TF  D +  RG  I   L   IE   + IV
Sbjct: 19  YHVFLSFRTEGTHLDFANTLCTSLQRNGISTFRYDKQKERGYLILEKLHKVIEQCLVVIV 78

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPS------------- 121
           + SE YASS WCL+EL KILESK   G  V P+FY V PSD  +  +             
Sbjct: 79  LLSENYASSTWCLDELHKILESKRVLGTPVFPLFYDVVPSDVRHQKNKFAEAFEEHATRP 138

Query: 122 -----------------LGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
                             G+ G       +  LIE  +  +  KL    PS + D LVG+
Sbjct: 139 EEDKVKVQKWRESLHEVAGFSGWESKNWKKEELIEEIIESVWTKLRPKLPSYD-DGLVGI 197

Query: 165 ESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           +S ++++ S L L    +   +GIWG+GGIGKTT+A  ++  I + F+ S F++N+R+ S
Sbjct: 198 DSRVEKMNSLLKLELKDKVCFIGIWGMGGIGKTTLARVVFKKIRNKFDISCFLENVREIS 257

Query: 224 EKVGGLANIHLNFERRRLSRMK------------------------VLIVFYDLTDLKQI 259
           +   G+    L+ + + LS MK                        VL+V  D+ D++Q+
Sbjct: 258 QNSDGM----LSLQGKLLSHMKMKDLKIQNLDEGKSIIGGILFNNNVLLVLDDVNDIRQL 313

Query: 260 D-LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHV--FEVKELSYNDSLTLFSRNAF 316
           +   +       PGSR+II TRD+++L++H     G V  +++  L+ ++SL LFS+ AF
Sbjct: 314 ENFSVNDQKWLGPGSRIIIITRDMEVLRSH-----GTVESYKIDLLNSDESLQLFSQKAF 368

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
            ++ P    L+LS + ++ A G+PLA++++GS   G SE +W+  +   +      +   
Sbjct: 369 KRDQPLEHILQLSKVAVQQAGGLPLAIEMMGSSFCGRSESQWKEFLEVKEYTKKDVVMDK 428

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC-RFSAKIGISRLVGKSLVTISN 435
           L +SYDGL    + +FLD ACFF G  +  V   L  C R+ A  GI  L+ KSL T   
Sbjct: 429 LIISYDGLPPSYKILFLDIACFFNGWVKEHVTQILTICGRYPAN-GIDVLIDKSLATYDG 487

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKE 493
           +++ MHDLLQEMG +IV +E   D GKRSRLW P+D  Q L  N+   L  GI L S  +
Sbjct: 488 SRLWMHDLLQEMGRKIVVEECPIDAGKRSRLWSPQDTDQALKRNKENELIQGIVLQSSTQ 547

Query: 494 LYLGG-------------------------------CSNLKRFPEISCNIE--------- 513
            Y                                  CS++K      C ++         
Sbjct: 548 PYNANWDPEAFSKMYNLKFLVINYHNIQVPRGIKCLCSSMKFLQWTGCTLKALPLGVKLE 607

Query: 514 ---DLDLKETAIEELPSSIGNLSRLVDLDLTN-----------------------CSGLK 547
              +L ++ + I+++ S   + ++L  +DL++                       C  L 
Sbjct: 608 ELVELKMRYSKIKKIWSGSQHFAKLKFIDLSHSEDLIESPIVSGVPCLEILLLEGCINLV 667

Query: 548 SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKL 606
            V   +   K L  LNL GC+ L+ LP +   ++SLE L L+     +K+P+  K +  L
Sbjct: 668 EVHQSVGQHKKLVLLNLKGCINLQTLPTKF-EMDSLEELILSGCSKVKKLPNFGKNMQHL 726

Query: 607 SDLRLQNCKRLQSLPE----LPCGSSIHARHCTSLKTLSNS 643
           S + L+ CK L  LP+    L     +    C+   TL NS
Sbjct: 727 SLVNLEKCKNLLWLPKSIWNLKSLRKLSICGCSKFSTLPNS 767



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 20/129 (15%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT   +DSL+EL L GCS +K+ P    N++ L L                    ++L
Sbjct: 692 TLPTKFEMDSLEELILSGCSKVKKLPNFGKNMQHLSL--------------------VNL 731

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             C  L  +   + NLKSLR+L++ GC K   LP  +    SLE L+++     +I SS 
Sbjct: 732 EKCKNLLWLPKSIWNLKSLRKLSICGCSKFSTLPNSMNENGSLEELDVSGTPIREITSSK 791

Query: 601 KQLSKLSDL 609
             L  L +L
Sbjct: 792 VCLENLKEL 800


>gi|227438247|gb|ACP30613.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 950

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 217/693 (31%), Positives = 330/693 (47%), Gaps = 115/693 (16%)

Query: 2   ASSSSSINMIPHPKHDVFLSFR-GKDVRHNFVSHLNAALCREKIETFID-DKLNRGNEIS 59
           A++SS++      ++DV L +R G     NF++HL AA  R  +    D D+++      
Sbjct: 126 AAASSALK-----EYDVVLRYRRGCISDDNFITHLRAAFYRRGVSLREDIDEVD------ 174

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
                A+   ++ I+  +  Y  S      L+ I+E ++K  ++V P+FY + PSD    
Sbjct: 175 -----AVPECRVLIIFLTSTYVPS-----NLLNIVEQQSKKPRVVYPIFYGISPSDLISN 224

Query: 116 ----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKD 159
                           A         G      SES LI+  V D    L     S+ K 
Sbjct: 225 RNYGRPFHQDEAKRLQAALEEITQMHGYILTDKSESELIDEIVRDALNVLR----SNEKK 280

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
            ++G++  IKEI S L + S +   +GIWG  GIGKT IA  I+  IS  +E   F++++
Sbjct: 281 NMIGMDMQIKEILSLLCTESQDVRRIGIWGAVGIGKTAIAEEIFHRISVQYETCVFLKDL 340

Query: 220 RDESEKVGGLA--------------------NIHLNFERRRLSRMKVLIVFYDLTDLKQI 259
             E E  G  A                    NI ++F R RL R   L+V  D+ D + +
Sbjct: 341 HKEVELKGYDAVREELLSKLLEVEPDVIRTSNIKVSFLRSRLQRKSALVVLDDVNDFRDV 400

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
           +     L  F P SRVIIT+R+  +      S+  +V+EVK L + +SL L +   F   
Sbjct: 401 ETFAEMLSYFGPRSRVIITSRNRHVFI---LSKTDYVYEVKPLEFPNSLHLLNPGIFQSG 457

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                +  LS  ++K++NG P  LQ L          EW+S   ++++   + I  + + 
Sbjct: 458 LSPELYKTLSLELVKFSNGNPQVLQFLS--------REWKSLSKEIQKSSAIYIPGIFER 509

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           S  GLD+ E++IFLD ACFF+  D+  V   LD C FSA IG   LV KSL+TIS+N + 
Sbjct: 510 SCCGLDENEKSIFLDIACFFRKMDKDDVAMLLDGCGFSAHIGFKNLVDKSLLTISHNTVD 569

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINLDSLKELYLG 497
           M   LQ  G EIVRQESI  PG RSRLW+ EDI  V  +N  TS   G+ LD + +L   
Sbjct: 570 MLWFLQATGREIVRQESIDRPGDRSRLWNAEDIRDVFLDNIGTSDIEGLFLD-MSQLKFD 628

Query: 498 GCSNLKRFPEISCNIEDLDLK------------ETAIEELPSSIGNL------------- 532
              N+  F ++ CN+  L                  +E LP+ +  L             
Sbjct: 629 ASPNV--FDKM-CNLRLLKFYFSELIENHGVSLPQGLEYLPTKLRLLHWEYYPISSLPQC 685

Query: 533 ---SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
                L++L++ N S +K +     +L++L+++ LS   +L KLP  + + ++LE L+L 
Sbjct: 686 FDPKNLIELNMPN-SCVKKLWKGKKSLENLKKMRLSYSSQLTKLP-RLTSAQNLELLDLE 743

Query: 590 E-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
             K  E I  S+  L KL  L L++C  L+S+P
Sbjct: 744 GCKSLESISHSICYLKKLVSLNLKDCSNLESVP 776



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 86/142 (60%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           S+P+  +L+SL+ L L GCS L+ FPEIS N+++L L  T I E+PSSI NL  L  LDL
Sbjct: 774 SVPSTSDLESLEVLNLSGCSKLENFPEISPNVKELYLGGTMIREIPSSIKNLVLLEKLDL 833

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            N   L  + + +C LK L  LNLSGC  LE  P+    ++ L+ L+L+     ++PSS+
Sbjct: 834 ENSRHLVILPTSMCKLKHLETLNLSGCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSI 893

Query: 601 KQLSKLSDLRLQNCKRLQSLPE 622
             L  L ++R   CK L  LP+
Sbjct: 894 SYLIALEEVRFVGCKSLVRLPD 915



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 52/183 (28%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
           +L++LK++ L   S L + P ++ + ++L+L                    LDL  C  L
Sbjct: 710 SLENLKKMRLSYSSQLTKLPRLT-SAQNLEL--------------------LDLEGCKSL 748

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
           +S+S  +C LK L  LNL  C  LE +P    +LESLE LNL+                 
Sbjct: 749 ESISHSICYLKKLVSLNLKDCSNLESVPS-TSDLESLEVLNLS----------------- 790

Query: 607 SDLRLQNCKRLQSLP-------ELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
                  C +L++ P       EL  G ++     +S+K L     L   +S+H  I   
Sbjct: 791 ------GCSKLENFPEISPNVKELYLGGTMIREIPSSIKNLVLLEKLDLENSRHLVILPT 844

Query: 660 SNC 662
           S C
Sbjct: 845 SMC 847


>gi|297850156|ref|XP_002892959.1| hypothetical protein ARALYDRAFT_471969 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338801|gb|EFH69218.1| hypothetical protein ARALYDRAFT_471969 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 963

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 218/694 (31%), Positives = 336/694 (48%), Gaps = 100/694 (14%)

Query: 1   MASSSSSINMIPH-PKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEI 58
           MASSS+     P   K+DVFLSFRG+D R   VSHL AAL    I TF DD +L  G+ I
Sbjct: 1   MASSSA-----PRVSKYDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEIGDHI 55

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
           S  L  A+  S  ++V+ SE YA+SRWCL EL  I+E   +    V P+FY VDPS   +
Sbjct: 56  SDELRRALGSSSFAVVVLSENYATSRWCLLELQLIMELMKEGRLEVFPIFYGVDPSVVRH 115

Query: 119 -----------CPSLG-----WMGIFDIPTS-----------ESVLIEGNVNDISKKLSD 151
                       P +      W    ++  +           E++++     DIS++++ 
Sbjct: 116 QLGSFALEKYQGPEMADKVLRWREALNLIANLSGVVSSHCVDEAIMVGEIARDISRRVTL 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           L   D+ + +VG+++ ++ +  +L   S E   VGIWG+GGIGKT+IA  +Y  +S  F 
Sbjct: 176 LHKIDSGN-IVGMKAHMEGLNHRLDLESNEVLMVGIWGMGGIGKTSIAKCLYDQLSPKFP 234

Query: 212 GSYFMQNIRDESEKVGG---------LANIHLNFER------------RRLSRMKVLIVF 250
              F +NI+  S+ +G          L NI  +  R            +RL   +V +V 
Sbjct: 235 AHCFTENIKSVSKDIGHDLKHLQKEMLCNILCDDIRLWSVEAGCQEIKKRLGNQRVFLVL 294

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
             +  + Q+  L    + F PGSR+IITTRD+ LL N  G  +  V+EVK L   D+L +
Sbjct: 295 DGVDKVSQVHALAKDKNWFGPGSRIIITTRDMGLL-NTCGVEI--VYEVKCLDDKDALHM 351

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG--MSEEEWESAVNKLKRM 368
           F + AF    P   F +LS    + A+G+P A+Q    +L+G   + + WE A++ L+  
Sbjct: 352 FKQIAFEGGLPPDSFEQLSIRASRLAHGLPSAIQAYALFLRGRTATPDGWEEALSALESS 411

Query: 369 PHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
              +I ++LK+SY+GL    QN+FL   C F G+    + + L      + + I  L  K
Sbjct: 412 LDENIMEILKISYEGLPKPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEK 471

Query: 429 SLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--------NEN 479
           S + IS N  + MH L+++MG EI+R         R  L  P +I   L         E 
Sbjct: 472 SFIKISTNGSVIMHKLVEQMGREIIRDNM---SLARKFLRDPMEIPDALAFRDGGEQTEC 528

Query: 480 TSLPTG--INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSS--IGNLSRL 535
             L T     + S++   +G   NLK F ++    + +D +E+ ++ +P    +    RL
Sbjct: 529 MCLHTCELTCVLSMEASVVGRMHNLK-FLKV---YKHVDYRESKLQLIPDQQFLPRSLRL 584

Query: 536 VDLDLTNCSGLKSVSS-----------------RLCNLKSLRRLNLSGCLKLEKLPEEIG 578
              D      L S S                  R C LKSL+RL+++G   L++LP ++ 
Sbjct: 585 FHWDAFPLRALPSGSDPCFLVELNLRHSDLETLRTCMLKSLKRLDVTGSKYLKQLP-DLS 643

Query: 579 NLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRL 611
           ++ SLE L L +    + IP  + + S L  L+L
Sbjct: 644 SITSLEELLLEQCTRLDGIPECIGKRSTLKKLKL 677



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 10/170 (5%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSR 534
           E+ S     +   LKEL L    N++R P   C++E    LDL     E LP ++ +LSR
Sbjct: 771 ESFSFDIFPDFPDLKELKLVNL-NIRRIPSGICHLELLEKLDLSGNDFENLPEAMNSLSR 829

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY----LNLAE 590
           L  L L NC  L+ +  +L  +++L   N         L   +     L +    L ++ 
Sbjct: 830 LKTLWLRNCFKLEELP-KLTQVQTLTLTNFKMREDTVYLSFALKTARVLNHCQISLVMSS 888

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
            DFE +P S++ L+ L  L L NCK+L+S+  +P     + A  C SL+ 
Sbjct: 889 HDFETLPPSIRDLTSLVTLCLNNCKKLKSVERIPTSLQFLDAHGCDSLEA 938



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 20/154 (12%)

Query: 486 INLDSLKELYLGG------CSNLKRFPE-ISCNIED-LDLKETAI-EELPSSIGNLSRLV 536
           + +D+L  + +GG      CS  + + E +S N E  + +  T I ++ P  I   +R  
Sbjct: 698 VKMDALINISIGGDISFEFCSKFRGYAEYVSFNSEQHIPVISTMILQQAPWVISECNRFN 757

Query: 537 DLDLTNCSGLKS-------VSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            L +   S  ++       +     +LK L+ +NL+    + ++P  I +LE LE L+L+
Sbjct: 758 SLSIMRFSHKENGESFSFDIFPDFPDLKELKLVNLN----IRRIPSGICHLELLEKLDLS 813

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             DFE +P +M  LS+L  L L+NC +L+ LP+L
Sbjct: 814 GNDFENLPEAMNSLSRLKTLWLRNCFKLEELPKL 847


>gi|359486100|ref|XP_002274578.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1535

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/477 (35%), Positives = 242/477 (50%), Gaps = 83/477 (17%)

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           +V +V  D+ D  Q++ L+G  +    GSRVI+TTR+  +L       V  ++EVK L++
Sbjct: 417 RVFMVLDDVDDPSQLEYLLGHREWLGEGSRVIVTTRNKHVLAVQE---VDDLYEVKGLNF 473

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
            ++  LFS  AF QN P + +  LS+ V+ Y  G+PLAL+VLGS L   +  +WES + K
Sbjct: 474 EEACELFSLYAFKQNLPKSDYRNLSHRVVGYCQGLPLALKVLGSLLFKKTIPQWESELRK 533

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           L R P   I KVL+ SYDGLD  EQNIFLD ACFFKG D+  V   LDAC F A+IGI  
Sbjct: 534 LDREPEAGIHKVLRRSYDGLDRTEQNIFLDVACFFKGEDRDFVSRILDACDFPAEIGIKN 593

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT 484
           L  K L+T+  N+I MHDL+Q MG EIVR++   +P + SRLW P DI Q L  +  +P 
Sbjct: 594 LNDKCLITLPYNRIAMHDLIQHMGCEIVREKFPDEPNQWSRLWDPHDIQQALRTSKEIPK 653

Query: 485 G--INLD---------------------------------------------SLKELYLG 497
              I+LD                                              L EL+L 
Sbjct: 654 AQTISLDLSKLKRVCFDSNVFAKMTSLRLLKVHSGVYYHHFEDFLPSNFDGEKLVELHL- 712

Query: 498 GCSNLKRFPE------------ISC--------------NIEDLDLKE-TAIEELPSSIG 530
            CSN+K+  +            +SC              N+E L L+   ++ ++  S+G
Sbjct: 713 KCSNIKQLWQGHKDLERLKVIDLSCSRNLIQMSEFSSMPNLERLILEGCVSLIDIHPSVG 772

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
           N+ +L  L L  C  LK++   +  L+SL  L+LS C K  K PE+ GN++SL  L+L  
Sbjct: 773 NMKKLTTLSLRFCDQLKNLPDSIGYLESLESLDLSDCSKFVKFPEKGGNMKSLMKLDLRF 832

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC----TSLKTLSNS 643
              + +P S+  L  L  L L  C + +  PE   G+    RH     T++K L +S
Sbjct: 833 TAIKDLPDSIGDLESLESLNLSFCSKFEKFPE-KGGNMKSLRHLCLRNTAIKDLPDS 888



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/226 (41%), Positives = 122/226 (53%), Gaps = 35/226 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSFRG+D R+NF  HL  AL    I TF DDKL RG  I+P L  AIE S+ S+++
Sbjct: 24  YDVFLSFRGEDTRYNFTDHLYKALVNRGIRTFRDDKLRRGEAIAPELLKAIEESRSSVIV 83

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------AGYCPSLG 123
           FSE YA SRWCL+ELVKI+E     G  V P+FY VDPS             AGY     
Sbjct: 84  FSENYAGSRWCLDELVKIMECHKDLGH-VFPIFYHVDPSHVRNQEGSFGKAFAGY--EEN 140

Query: 124 WMGIFDIPTSESVLIEG------------NVNDISKKLSDLFPS------DNKDQLVGVE 165
           W     IP   + L E               N + +  + ++        D  D LVG++
Sbjct: 141 WKD--KIPRWRTALTEAANLSGWHILDGYESNQVKEITASIYRRLKCKRLDAGDNLVGMD 198

Query: 166 SIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           S +KE+  +L   S++   VGI+G+GGIGKT IA  IY+ +S  FE
Sbjct: 199 SHVKEMILRLHMESSDVRIVGIYGVGGIGKTAIAKVIYNKLSCEFE 244



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 27/168 (16%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
            LP  I +L+SL+ L L  CS  ++FPE   N++ L    L+ TAI++LP SIG+L  L+ 
Sbjct: 838  LPDSIGDLESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLRNTAIKDLPDSIGDLESLMF 897

Query: 538  LDLTNCS-----------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            L+L+ CS                        +K +   + +L+SLR L+LSGC K EK P
Sbjct: 898  LNLSGCSKFEKFPEKGGNMKSLMELDLRYTAIKDLPDSIGDLESLRLLDLSGCSKFEKFP 957

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            E+ GN++SL  L+L     + +P S+  L  L  L L +C + +  PE
Sbjct: 958  EKGGNMKSLVELDLKNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPE 1005



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 27/168 (16%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVD 537
            LP  I +L+SL  L L GCS  ++FPE   N++   +LDL+ TAI++LP SIG+L  L  
Sbjct: 885  LPDSIGDLESLMFLNLSGCSKFEKFPEKGGNMKSLMELDLRYTAIKDLPDSIGDLESLRL 944

Query: 538  LDLTNCS-----------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            LDL+ CS                        +K +   + +L+SL  L+LS C K EK P
Sbjct: 945  LDLSGCSKFEKFPEKGGNMKSLVELDLKNTAIKDLPDSIGDLESLESLDLSDCSKFEKFP 1004

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            E+ GN++SL++L L     + +P S+  L  L  L L +C + +  PE
Sbjct: 1005 EKGGNMKSLKWLYLTNTAIKDLPDSIGDLESLLSLHLSDCSKFEKFPE 1052



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 26/150 (17%)

Query: 499  CSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN 555
            CS  ++FPE   N++ L   DL+ TAI++LP SIG+L  L  LDL++CS  +    +  N
Sbjct: 1044 CSKFEKFPEKGGNMKSLMKLDLRYTAIKDLPDSIGDLESLRLLDLSDCSKFEKFPEKGGN 1103

Query: 556  LKSLRRL-----------------------NLSGCLKLEKLPEEIGNLESLEYLNLAEKD 592
            +KSL++L                       +LS C K EK PE+ GN++SL  L+L    
Sbjct: 1104 MKSLKKLFLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLMDLDLTNTA 1163

Query: 593  FEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
             + +P S+  L  L  L L +C + +  PE
Sbjct: 1164 IKDLPDSIGDLESLKFLVLSDCSKFEKFPE 1193



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 27/163 (16%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
            LP  I +L+SL+ L L  CS  ++FPE   N++ L    L+ TAI++LP SIG+L  L  
Sbjct: 1073 LPDSIGDLESLRLLDLSDCSKFEKFPEKGGNMKSLKKLFLRNTAIKDLPDSIGDLESLES 1132

Query: 538  LDLTNCS-----------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            LDL++CS                        +K +   + +L+SL+ L LS C K EK P
Sbjct: 1133 LDLSDCSKFEKFPEKGGNMKSLMDLDLTNTAIKDLPDSIGDLESLKFLVLSDCSKFEKFP 1192

Query: 575  EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
            E+ GN++SL +L+L     + +P+++ +L  L  L L  C  L
Sbjct: 1193 EKGGNMKSLIHLDLKNTAIKDLPTNISRLKNLERLMLGGCSDL 1235



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 29/169 (17%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIG------- 530
            LP  I +L+SL+ L L  CS  ++FPE   N++ L    L  TAI++LP SIG       
Sbjct: 979  LPDSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKWLYLTNTAIKDLPDSIGDLESLLS 1038

Query: 531  -----------------NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
                             N+  L+ LDL   + +K +   + +L+SLR L+LS C K EK 
Sbjct: 1039 LHLSDCSKFEKFPEKGGNMKSLMKLDLRY-TAIKDLPDSIGDLESLRLLDLSDCSKFEKF 1097

Query: 574  PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            PE+ GN++SL+ L L     + +P S+  L  L  L L +C + +  PE
Sbjct: 1098 PEKGGNMKSLKKLFLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPE 1146



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 73/146 (50%), Gaps = 28/146 (19%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           +LP  I  L+SL+ L L  CS   +FPE   N++ L   DL+ TAI++LP SIG+L    
Sbjct: 790 NLPDSIGYLESLESLDLSDCSKFVKFPEKGGNMKSLMKLDLRFTAIKDLPDSIGDL---- 845

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKI 596
                               +SL  LNLS C K EK PE+ GN++SL +L L     + +
Sbjct: 846 --------------------ESLESLNLSFCSKFEKFPEKGGNMKSLRHLCLRNTAIKDL 885

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPE 622
           P S+  L  L  L L  C + +  PE
Sbjct: 886 PDSIGDLESLMFLNLSGCSKFEKFPE 911


>gi|224114311|ref|XP_002332395.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222832718|gb|EEE71195.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1144

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 189/555 (34%), Positives = 306/555 (55%), Gaps = 72/555 (12%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           ES  I+   + IS KLS   P+ +K +LVG++S ++ +   +   + E   +GI G+GGI
Sbjct: 10  ESESIKAIADCISYKLSLTLPTISK-ELVGIDSRLEVLNGYIGEETGEAIFIGICGMGGI 68

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDE-SEKVGG-------LANIHLNFE-------- 237
           GKTT+A  +Y  I   FEGS F+ N+R+  +EK G        L++I +  +        
Sbjct: 69  GKTTVARVLYDRIRRRFEGSCFLANVREAFAEKDGPRSLQKKLLSDILMERDINICDSST 128

Query: 238 -----RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
                +++L R+K+L+V  D+ D KQ++ L      F PGSR+IIT+RD  +L  +  ++
Sbjct: 129 GIEMIKQKLQRIKILVVLDDVNDRKQLEYLAKEPGWFGPGSRIIITSRDTNVLIGNDDTK 188

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           +   +E ++L+ +D+L LFS+ AF  + PA GF+ELS  V+ YANG+PLA +V+GS+L  
Sbjct: 189 I---YEAEKLNDDDALMLFSQKAFKNDQPAEGFVELSKQVVDYANGLPLAHEVIGSFLYE 245

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            S  EW  A+N++  +P   I  VL+VS+DGL + ++ IFLD ACF KG  +  +   L+
Sbjct: 246 RSIPEWRGAINRMNEIPDGKIIDVLRVSFDGLHESDKKIFLDIACFLKGFKKDRITRILE 305

Query: 413 ACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI 472
           +  F A IGI  L+ +SL+++S +++ MHDLLQ MG EIVR ES ++PG+RSRLW  ED+
Sbjct: 306 SRGFHAGIGIPVLIERSLISVSRDQVWMHDLLQIMGKEIVRCESPEEPGRRSRLWTYEDV 365

Query: 473 YQVLNENTS----------LPTGI-----NLDS---LKELYLGGCSN--LKRFPE-ISCN 511
              L +NT           +P GI     N+++   + +L L   +N  L   PE +S  
Sbjct: 366 CLALMDNTGKEKIEAIFLDMP-GIKDAQWNMEAFSKMSKLRLLKINNVQLSEGPEDLSNK 424

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS------GLKSV---------------- 549
           +  L+      + LP+ +  +  LV+L + N +      G KS                 
Sbjct: 425 LRFLEWYSYPSKSLPAGL-QVDELVELHMANSNLDQLWYGCKSALNLKIINLSYSLNLSR 483

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSD 608
           +  L  + +L  L L GC  L ++   +G+ ++L+Y+NL   K    +PS++ ++  L  
Sbjct: 484 TPDLTGIPNLESLILEGCTSLSEVHPSLGSHKNLQYVNLVNCKSIRILPSNL-EMESLKV 542

Query: 609 LRLQNCKRLQSLPEL 623
             L  C +L+  P++
Sbjct: 543 FTLDGCLKLEKFPDV 557



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 85/143 (59%), Gaps = 3/143 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GC  L++FP++  N+     L L ET I +L SSI +L  L  L
Sbjct: 531 LPSNLEMESLKVFTLDGCLKLEKFPDVVRNMNCLMVLRLDETGITKLSSSIRHLIGLGLL 590

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + +C  LKS+ S +  LKSL++L+LSGC +L+ +P+ +G +ESLE  +++     + P+
Sbjct: 591 SMNSCKNLKSIPSSISCLKSLKKLDLSGCSELKNIPKNLGKVESLEEFDVSGTSIRQPPA 650

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP 621
           S+  L  L  L    CKR+   P
Sbjct: 651 SIFLLKSLKVLSFDGCKRIAVNP 673



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 96/173 (55%), Gaps = 11/173 (6%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           S+P+ I+ L SLK+L L GCS LK  P+    +E L   D+  T+I + P+SI  L  L 
Sbjct: 600 SIPSSISCLKSLKKLDLSGCSELKNIPKNLGKVESLEEFDVSGTSIRQPPASIFLLKSLK 659

Query: 537 DLDLTNCS--GLKSVSSRLCNLK---SLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAE 590
            L    C    +     RL +L    SL  L+L  C L+   LPE+IG L SL  L+L++
Sbjct: 660 VLSFDGCKRIAVNPTDHRLPSLSGLCSLEVLDLCACNLREGALPEDIGFLSSLRSLDLSQ 719

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSN 642
            +F  +P S+ QL +L  L L++C  L+SLPE+P    +++   C SLK + +
Sbjct: 720 NNFVSLPQSINQLFELERLVLEDCSMLESLPEVPSKVQTVNLNGCISLKEIPD 772



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 13   HPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKIS 72
            H    VF   R  D   N +++L + L R  I +           I   L  AIE S +S
Sbjct: 980  HWMASVFPDIRVADT-SNAITYLKSDLARRVIISL------NVKAIRSRLFKAIEESGLS 1032

Query: 73   IVIFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
            IVIFS   AS  WC +ELVKI+   ++     V PV Y V+ S
Sbjct: 1033 IVIFSRDCASLPWCFDELVKIVGFMDEMRSDTVFPVSYDVEQS 1075


>gi|297848176|ref|XP_002891969.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337811|gb|EFH68228.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 215/705 (30%), Positives = 341/705 (48%), Gaps = 102/705 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA+S SS       +++VF SF G DVR  F+SHL     +  I  F D+ + R   I  
Sbjct: 1   MATSPSSSRTW---EYNVFTSFHGPDVRKTFLSHLRNQFNQNGITMFDDNGIPRSENIPS 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA---- 116
           +L   I  S+ISI++ S+ YASSRWCL+EL++IL+ K   G+IV+ VFY VDPSD     
Sbjct: 58  ALIQGIRESRISIIVLSKMYASSRWCLDELLEILKCKEDVGKIVMTVFYGVDPSDVRNQT 117

Query: 117 --------------------GYCPSLGWMGIFDIPT-----SESVLIEGNVNDISKKLSD 151
                                +  +L ++G  +I       +E+ +I     D+S +L+ 
Sbjct: 118 GDFGIAFNKTCARKTKEHGRKWSEALDYVG--NIAGEHNWGNEAEMIAKIARDVSDRLNA 175

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
               D  D +VG+E+ ++E+ES L         VG+ G  GIGK+TIA A+ S +S+ F+
Sbjct: 176 TLSRDF-DGMVGLETHLREMESLLNFDYVGVKIVGLAGPAGIGKSTIARALCSGLSNRFQ 234

Query: 212 GSYFMQNIRDESEKVG----------------------GLANIHLNFERRRLSRMKVLIV 249
            + FM N+  E+ K+G                      G+   HL   + RL   ++LI+
Sbjct: 235 RTCFMDNLM-ENCKIGLGEYSLKLHLQEQLLSKVLNLNGIRISHLRVIQERLHDKRILII 293

Query: 250 FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
             D+ +L Q++ L   +  F PGSRVI+TT + ++L+ H    +  +++V   S +++LT
Sbjct: 294 LDDVENLVQLEAL-ANISWFGPGSRVIVTTENKEILQQHG---INDIYQVGFPSESEALT 349

Query: 310 LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
           +F  +AF Q  P  GF++L+  V+K    +PL L VLGS L+G S+ +W   + +LK   
Sbjct: 350 IFCLSAFRQTSPPDGFMKLTCEVVKICGNLPLGLHVLGSSLRGKSQADWIDELPRLKICL 409

Query: 370 HMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKS 429
              I+ VLKV Y+ L +++Q IFL  A F        V + L        +G+  L  K 
Sbjct: 410 DGRIESVLKVGYESLHEKDQVIFLLIAIFLNYAHVDHVTSVLAKTNLDVSLGLKNLAKKY 469

Query: 430 LVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSLPTGIN 487
           L+   ++ + MH LLQ M  +++   S ++  KR  L    +I  VL   E      G++
Sbjct: 470 LIQRESSIVVMHHLLQVMATQVI---SKQERSKRQILVDANEICFVLEMAEGNGSIIGVS 526

Query: 488 LD--SLKELYLGGCSNLKRFPEISCNIEDLDL---KETAIEEL--PSSIGNLSRL----- 535
            D   + EL +   +  K      CN+  L +   K T   +L  P+ +    RL     
Sbjct: 527 FDVAEINELRISATAFAKM-----CNLAFLKVYNGKHTEKTQLHIPNEMEFPRRLKLLHW 581

Query: 536 ---------VDLDLTNCSGLKSVSSRLCN-------LKSLRRLNLSGCLKLEKLPEEIGN 579
                    +   L N        S+L         L +L+ +NL+    L++LP ++  
Sbjct: 582 EAYPKKSLPIGFCLENLVKFNMAFSKLEKLWEGTQPLANLKEMNLAVSTHLKELP-DLSK 640

Query: 580 LESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
             +LE LNL       +IPSS+  L KLS+L +  C+ L+ +P L
Sbjct: 641 ATNLESLNLNGCTALVEIPSSIVNLHKLSELGMSTCESLEVIPTL 685



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 33/182 (18%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +PT INL SL+ +++     LKRFP+   N++++++ +T +EELP+S+ + +RL  LD+ 
Sbjct: 682 IPTLINLASLERIWMFQSLQLKRFPDSPTNVKEIEIYDTGVEELPASLRHCTRLTTLDIC 741

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
           +    K+ S+           +L  C+                +++L+    E+I + +K
Sbjct: 742 SNRNFKTFST-----------HLPTCIS---------------WISLSNSGIERITACIK 775

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFS 660
            L  L  L L  CK+L+SLPELP     + A  C SL+ +S      T +        F+
Sbjct: 776 GLHNLQFLILTGCKKLKSLPELPDSLELLRAEDCESLERVSGPLKTPTAT------LRFT 829

Query: 661 NC 662
           NC
Sbjct: 830 NC 831


>gi|5903073|gb|AAD55631.1|AC008017_4 Similar to disease resistance proteins [Arabidopsis thaliana]
          Length = 1112

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 214/617 (34%), Positives = 305/617 (49%), Gaps = 59/617 (9%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R   VSHL  AL    + TF DD KL  G+ I+  L  AI+ S  ++V
Sbjct: 15  YDVFLSFRGVDTRQTIVSHLYVALRNNGVLTFKDDRKLEIGDTIADGLVKAIQTSWFAVV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTSE 134
           I SE YA+S WCL EL  I++  ++    V+P+FY V PSD  Y    G          E
Sbjct: 75  ILSENYATSTWCLEELRLIMQLHSEEQIKVLPIFYGVKPSDVRY--QEGSFATAFQSVDE 132

Query: 135 SVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGST-EFNTVGIWGIGGI 193
           + +I   V  IS +L  +  +D  + LVG+E+ + ++   L  G   E + +GIWG+GGI
Sbjct: 133 ADMIAEVVGGISSRLPRMKSTDLIN-LVGMEAHMMKMTLLLNIGCEDEVHMIGIWGMGGI 191

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFE---------------- 237
           GK+TIA  +Y   S  F    F++N+        G    HL  E                
Sbjct: 192 GKSTIAKCLYDRFSRQFPAHCFLENVSK------GYDIKHLQKELLSHILYDEDVELWSM 245

Query: 238 -------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRG 290
                  + RL   KV +V  ++  ++Q+  L      F PGSR+IITTRD  LL +   
Sbjct: 246 EAGSQEIKERLGHQKVFVVLDNVDKVEQLHGLAKDPSWFGPGSRIIITTRDKGLLNS--- 302

Query: 291 SRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL 350
             V +++EVK L   D+L +F + AFG   P+ GF +L     + A+G+P AL    S+L
Sbjct: 303 CGVNNIYEVKCLDDKDALQVFKKLAFGGRPPSDGFEQLFIRASRLAHGLPSALVAFASHL 362

Query: 351 KGM-SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
             + + +EWE  +  L+  P  ++Q++L+ SYDGLD  ++ +FL  ACFF G     +  
Sbjct: 363 SAIVAIDEWEDELALLETFPQKNVQEILRASYDGLDQYDKTVFLHVACFFNGGHLRYIRA 422

Query: 410 FLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
           FL  C       I+ L  K LV IS +  I+MH LL + G EIVRQES   P K+  LW 
Sbjct: 423 FLKNC----DARINHLAAKCLVNISIDGCISMHILLVQTGREIVRQESDWRPSKQRFLWD 478

Query: 469 PEDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKR----------FPEI--SCNIEDL 515
           P +I+ VL+ NT L   + NL  + + Y+    NLK            P I     I +L
Sbjct: 479 PTEIHYVLDSNTHLGGNVSNLQLISDDYVLS-RNLKLLHWDAYPLTILPPIFRPHTIIEL 537

Query: 516 DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
            L+ + +  L      L  L  LD+T    L+ +   L    +L  L L  C  L ++PE
Sbjct: 538 SLRYSKLNSLWDGTKLLPNLRILDVTGSRNLREL-PELSTAVNLEELILESCTSLVQIPE 596

Query: 576 EIGNLESLEYLNLAEKD 592
            I  L  L  LN+   D
Sbjct: 597 SINRL-YLRKLNMMYCD 612



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 30/215 (13%)

Query: 469 PEDIYQVL---------NENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLK 518
           PEDI Q+          N+   LPT +  L  LK L L  C  LK  P++S  +E L L 
Sbjct: 739 PEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQLS-QVERLVL- 796

Query: 519 ETAIEELPSSIGNLS----RLVDLDLTNCSGLKSVSSRLCNLKS------LRRLNLSGCL 568
            +   +L S +G L      L+D  +  C  L S+   L   KS      L  L+L  C 
Sbjct: 797 -SGCVKLGSLMGILGAGRYNLLDFCVEKCKSLGSLMGILSVEKSAPGRNELLELSLENCK 855

Query: 569 KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
            L  L EE+ +   L YL+L+  +F +IP+S+++LS +  L L NC ++ SL +LP    
Sbjct: 856 SLVSLSEELSHFTKLTYLDLSSLEFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLK 915

Query: 628 SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            ++A  C SL+ ++ SS     S  H D   FS+C
Sbjct: 916 YLYAHGCESLEHVNFSS---NHSFNHLD---FSHC 944



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
           L +E +PE+I  L+ LE L+L   DF  +P+SM QL+ L  L L NC+RL++LP+L    
Sbjct: 733 LNIEDIPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQLSQVE 792

Query: 628 SIHARHCTSLKTL 640
            +    C  L +L
Sbjct: 793 RLVLSGCVKLGSL 805


>gi|297850936|ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339191|gb|EFH69608.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1401

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 210/704 (29%), Positives = 345/704 (49%), Gaps = 105/704 (14%)

Query: 12  PHP-KHDVFLSFRGKDVRHNFVSHLNAALC-REKIETFIDDK-LNRGNEISPSLSSAIEG 68
           PH  K  VFLSFRG D R NF   L  AL  ++ +  F D++ + +G++I PSL  AIE 
Sbjct: 7   PHRLKFSVFLSFRGFDTRANFCERLYVALNEKQNVRVFRDNEGMEKGDKIDPSLFEAIED 66

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG----------- 117
           S  S+++ S+ YA+S WCLNEL  I E ++   + ++P+FY V+PSD             
Sbjct: 67  SAASVIVLSKNYANSAWCLNELALICELRSSLKRPMIPIFYGVNPSDVRKQSGHFEKDFE 126

Query: 118 -------------YCPSLGWMGIFDIP----TSESV------LIEGNVND-----ISKKL 149
                        +  ++  +G  +IP    T E+V      +    V+D     + K L
Sbjct: 127 ENAKTFDEETIQRWKRAMNLVG--NIPGFVCTEETVKDDNDGINRDKVDDMIELVVKKVL 184

Query: 150 SDLF--PSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNI 206
           +++   P    D  VG+ES ++++   L    ++   T+G++G+GGIGKTT+A + Y+ I
Sbjct: 185 AEVRNRPEKVADYTVGLESCVEDLMKLLDFESTSGVQTLGLYGMGGIGKTTLAKSFYNKI 244

Query: 207 SSHFEGSYFMQNIRDESEKVGGLANIHLNFER-------------RRLSRM-------KV 246
             +F+   F++++R++S    GL N+     +             R L ++       K 
Sbjct: 245 IVNFKHRVFIESVREKSSDQDGLVNLQKTLIKELFGLVPEIEDVSRGLEKIEENVHEKKT 304

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           ++V  D+  + Q++ L+G    +  GS ++ITTRD ++L       V   +EVK L+   
Sbjct: 305 IVVLDDVDHIDQVNALVGETKWYGEGSLIVITTRDSEILSKLS---VNQQYEVKCLTEPQ 361

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L LFS ++  +  P    LELS  +++    +PLA++V GS+L    E EW   + KL 
Sbjct: 362 ALKLFSYHSLRKEKPPKNLLELSTKIVRILGLLPLAVEVFGSHLYDKDENEWPVELEKLT 421

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND--QYLVMNFLDACRFSAKIGISR 424
                 +  VL +S++ LDDEE+ IFLD AC F   +  +  +++ L  C F+A+  +  
Sbjct: 422 NTQPDKLHCVLALSFESLDDEEKKIFLDIACLFLKMEITKDELVDILKGCGFNAEAALRV 481

Query: 425 LVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTS 481
           L+ KSLVTI  ++ + MHD +++MG ++V +E   DP  +SRLW   +I  VL+  + TS
Sbjct: 482 LIQKSLVTIMKDDTLWMHDQIRDMGRQMVLRECSDDPEMQSRLWDRGEIMNVLDYMKGTS 541

Query: 482 LPTGINLDSLKELYLGGCS------NLKRFPEIS--CNI-----------EDLDLKETAI 522
              GI  D  K+      +      NL+  P ++  CN            E     E  I
Sbjct: 542 SIRGIVFDFKKKFVRDPTADEIVSRNLRNNPGLNFVCNYLRNIFIRFRAEEKPKRSEITI 601

Query: 523 EELPSSIGNLSRLVDLDLTNCSG-LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
              P       RL+ ++     G LK + S       L+ +   GC  LE LP +I    
Sbjct: 602 PVEPFVPMKKLRLLQINNVELEGNLKLLPS------ELKWIQWKGC-PLENLPPDILA-R 653

Query: 582 SLEYLNLAEKDFEKIPS--SMKQLSKLSDLRLQNCKRLQSLPEL 623
            L  L+L+E    ++ +  S K    L  + L+ C  L+++P+L
Sbjct: 654 QLGVLDLSESGIRRVQTLPSKKVDENLKVINLRGCHSLKAIPDL 697



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 25/195 (12%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDL---- 540
            L+ L  L +  C  LKR PE   +++ L    +KET + ELP S GNLS+L+ L++    
Sbjct: 983  LEKLVVLRMNNCEKLKRLPESFGDLKSLRHLYMKETLVSELPESFGNLSKLMVLEMLKKP 1042

Query: 541  ------TNCSG------LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL 588
                  +N  G         V +   NL SL  L+        K+P+++  L SL  LNL
Sbjct: 1043 LFRISESNAPGTSEEPRFVEVPNSFSNLTSLEELDACSWRISGKIPDDLEKLSSLMKLNL 1102

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
                F  +PSS+  LS L +L L++C+ L+ LP LPC    ++  +C SL+++S+ S L 
Sbjct: 1103 GNNYFHSLPSSLVGLSNLQELSLRDCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELT 1162

Query: 648  TRSSKHWDIFNFSNC 662
                   +  N +NC
Sbjct: 1163 I-----LEDLNLTNC 1172



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 27/190 (14%)

Query: 460  PGKRSRLWHPEDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDL 515
            P    +L   ED+Y       +LP  I +L +L++L+L  C++L + P+      ++++L
Sbjct: 813  PSCLGKLTSLEDLYLDDTALRNLPISIGDLKNLQKLHLMRCTSLSKIPDTINKLISLKEL 872

Query: 516  DLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSS-----------------------R 552
             +  +A+EELP   G+L  L DL   +C  LK V S                        
Sbjct: 873  FINGSAVEELPLVTGSLLCLKDLSAGDCKSLKQVPSSIGGLNFLLQLQLNSTPIESLPEE 932

Query: 553  LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
            + +L  +R+L L  C  L+ LPE IG +++L  L L   + EK+P    +L KL  LR+ 
Sbjct: 933  IGDLHFIRQLELRNCKSLKALPESIGKMDTLHNLYLEGSNIEKLPKDFGKLEKLVVLRMN 992

Query: 613  NCKRLQSLPE 622
            NC++L+ LPE
Sbjct: 993  NCEKLKRLPE 1002



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 3/144 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN--IEDLDLKE-TAIEELPSSIGNLSRLVD 537
           +LP+    ++LK + L GC +LK  P++S +  +E L  +    + ++P S+GNL +L+ 
Sbjct: 670 TLPSKKVDENLKVINLRGCHSLKAIPDLSNHKALEKLVFERCNLLVKVPRSVGNLRKLLQ 729

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL  CS L      +  LK L +L LSGC  L  LPE IG++  L+ L L       +P
Sbjct: 730 LDLRRCSKLSEFLVDVSGLKCLEKLFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLP 789

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP 621
            S+ +L KL  L L  C+ +Q LP
Sbjct: 790 DSIFRLQKLEKLSLMGCRSIQELP 813



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 29/139 (20%)

Query: 488 LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
           L  L++L+L GCSNL   PE    + C +++L L  TAI  LP SI  L +L        
Sbjct: 748 LKCLEKLFLSGCSNLSVLPENIGSMPC-LKELLLDGTAISNLPDSIFRLQKL-------- 798

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
                            +L+L GC  +++LP  +G L SLE L L +     +P S+  L
Sbjct: 799 ----------------EKLSLMGCRSIQELPSCLGKLTSLEDLYLDDTALRNLPISIGDL 842

Query: 604 SKLSDLRLQNCKRLQSLPE 622
             L  L L  C  L  +P+
Sbjct: 843 KNLQKLHLMRCTSLSKIPD 861


>gi|297798298|ref|XP_002867033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312869|gb|EFH43292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 998

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 212/667 (31%), Positives = 323/667 (48%), Gaps = 81/667 (12%)

Query: 41  REKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKY 100
           R+ I+ F++      NEI       I+    S+VIFS+   SS  CL++LV+IL+ + K 
Sbjct: 5   RKCIDAFVN-----CNEIP----DVIDRVSASVVIFSKSCFSSTSCLDKLVRILQCQRKT 55

Query: 101 GQIVVPVFYLVDPS----------DAGYCPSLGWMGIFDIPT-------SESVLIEGNVN 143
           GQ+VVPVFY + PS          D     S     +  +P        SE  L+E  V 
Sbjct: 56  GQLVVPVFYGISPSNLVVQEHESADRVREWSSALQELKALPAHQYREECSEWELVEEIVK 115

Query: 144 DISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIY 203
           D+ +K    FP+    Q +G+ + + EIE  L         +GIWG+ GIGKTT+A  ++
Sbjct: 116 DVCEKF---FPT----QQIGINTRVMEIEQLLCKQPWGIRRIGIWGMPGIGKTTLAKTVF 168

Query: 204 SNISSHFEGSYFMQNIRDESEKVGGLANI----------HLNFERRRLSR---------- 243
             IS  +E S F++N  D +    GL  +           L  E R ++R          
Sbjct: 169 DQISGGYEASCFIKNF-DMAFHEKGLHRLLEEHFGKILKELPRESRNITRSSLPGEKLRK 227

Query: 244 MKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELS 303
           ++  +V  D+ +    +  +G    F PGS +IIT+RD Q+ ++ +   + HV+EV+ L+
Sbjct: 228 IRTFVVLDDVHNSLVAESFLGGFHWFGPGSLIIITSRDKQVFRHFQ---INHVYEVQSLN 284

Query: 304 YNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
            N++L LFS+ AFG++      LELS  VI YANG PLAL+  G  LKG    E E+   
Sbjct: 285 ENEALQLFSQCAFGKHIREQNLLELSKEVIDYANGNPLALRCYGRELKGKKLSEIETTFL 344

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGIS 423
           KLK     +I  + K SY+ L+D E+NIFLD ACFF+G +   V+  L+ C F   +GI 
Sbjct: 345 KLKLRTPNEIHDLFKSSYEALNDNEKNIFLDIACFFEGENVDYVIQLLEGCGFFPHVGIG 404

Query: 424 RLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP 483
            LV K L+TIS N++ MH ++Q+ G EI   ++++    R RLW P  I + L E+  L 
Sbjct: 405 VLVEKCLMTISENRVKMHRIIQDFGREISNGQTVQIERCR-RLWEPRTI-RFLLEDAKLE 462

Query: 484 TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS----SIGNLSRLVDLD 539
           T  +  +     LG       F +IS  I   D+K  A E + S     I   S      
Sbjct: 463 TYGDPKATYTHALGTEDIEGIFLDISNLI--FDVKPGAFENMLSLRYLKIFCSSYETYFG 520

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L    GL+S+      L+ L  +N      L+ LP+E      +E LNL+     K+   
Sbjct: 521 LRLPKGLESLPY---ELRLLHWVNYP----LQSLPQEFDPCHLVE-LNLSYSQLHKLWGG 572

Query: 600 MKQLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSLKTLSNSSTLLTRSSKHWDI 656
            K L  L  +RL + ++L  + ++    +I     + C+ L++      L     +H  +
Sbjct: 573 TKNLEMLKMVRLCHSQQLNEINDIGKAQNIELIDLQGCSKLQSFPAMGQL-----QHLRV 627

Query: 657 FNFSNCS 663
            N S C+
Sbjct: 628 VNLSGCT 634



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 37/206 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL-- 538
           S P    L  L+ + L GC+ ++ FPE+S NIE+L L+ T I ELP S  NLS  V L  
Sbjct: 615 SFPAMGQLQHLRVVNLSGCTEIRSFPEVSPNIEELHLQGTGIRELPISTVNLSPHVKLNR 674

Query: 539 -------------DLTNCSGLKSVSSRLCNLKSLRR---LNLSGCLKLEKLPEEIGNLES 582
                        D  N   L SV   + +   L +   LN+  C+ L  LP ++ +LES
Sbjct: 675 ELSNFLTEFPGVSDALNHERLPSVVEAVLSYHHLGKLVCLNMKDCVHLRSLP-QMADLES 733

Query: 583 LEYLNLAE----KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSL 637
           L+ LNL+      D +  P ++K+L             ++ LP+LP    + +A  C SL
Sbjct: 734 LKVLNLSGCSELDDIQGFPRNLKEL-------YIGGTAVKKLPQLPQSLEVLNAHGCVSL 786

Query: 638 KTLSNSSTLLTRSSKHWDIFNFSNCS 663
           K +      L R       + FS CS
Sbjct: 787 KAIPFGFNHLPR------YYTFSGCS 806


>gi|449483059|ref|XP_004156482.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like,
           partial [Cucumis sativus]
          Length = 786

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 168/515 (32%), Positives = 271/515 (52%), Gaps = 72/515 (13%)

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH--------------------L 234
           KTT+A A+Y+ I++ FEG  F+ N+R+ S++  GL  +                     +
Sbjct: 232 KTTLAKALYNKIANQFEGFCFLSNVRETSKQFNGLVQLQEKLLYEILKFDLKIGNLDEGI 291

Query: 235 NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
           N  R RL   KVLIV  D+ +LKQ++ L+G  D F  GS++I+TTR+  LL +H      
Sbjct: 292 NIIRSRLRSKKVLIVLDDVDNLKQLEALVGERDWFGHGSKIIVTTRNSHLLSSHE---FD 348

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
             + V+ELS+  SL LFS +AF ++HP++ +L+LS   I Y  G PLAL VLGS+L    
Sbjct: 349 EKYGVRELSHGHSLELFSWHAFKKSHPSSNYLDLSKRAINYCKGHPLALVVLGSFLCTRD 408

Query: 355 EEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC 414
           + +W + +++ +     DI+ ++++S+DGL+++ + IFLD +C F G     V + L+ C
Sbjct: 409 QIKWRTILDEFENSLSEDIEHIIQISFDGLEEKIKEIFLDISCLFVGEKVNYVKSVLNTC 468

Query: 415 RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
            FS   GI  L+  SL+T+ N ++ MHDL+++MG +IV  ES  +PGKRSRLW   D+ +
Sbjct: 469 HFSLDFGIIVLMDLSLITVENEEVQMHDLIRQMGQKIVNGESF-EPGKRSRLWLVHDVLK 527

Query: 475 VLNENT------------SLPTGINLDS-----LKELYLGGCSNLK-------------- 503
           V  +N+            S PT +++DS     +K L L    N +              
Sbjct: 528 VFADNSGTIAVKAIKLDLSNPTRLDVDSRAFRNMKNLRLLIVRNARFSTNVEYLPDNLKW 587

Query: 504 --------RFPEISC---NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSR 552
                   RF  +S    N+  LDL+ + I  L     +  RL  +DL+  S L+ +   
Sbjct: 588 IKWHGFSHRFLPLSFLKKNLVGLDLRHSLIRNLGKGFKDCKRLKHVDLSYSSLLEKIPD- 646

Query: 553 LCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRL 611
                +L  L L+ C  L  +P+ + +L  L  L+L    +  K+PS +  L  L  L+L
Sbjct: 647 FPATSNLEELYLNNCTNLRTIPKSVVSLGKLLTLDLDHCSNLIKLPSYL-MLKSLKVLKL 705

Query: 612 QNCKRLQSLPELPCGSS---IHARHCTSLKTLSNS 643
             CK+L+ LP+    S+   ++ + CT+L+ + +S
Sbjct: 706 AYCKKLEKLPDFSTASNLEXLYLKECTNLRMIHDS 740



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/102 (59%), Positives = 76/102 (74%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           + DVFLSFRG D R NF  HL+ AL ++ +  FIDD L RG +IS +LS AI+ + ISIV
Sbjct: 21  RFDVFLSFRGDDTRSNFTGHLDMALRQKGVNVFIDDMLKRGEQISETLSKAIQEALISIV 80

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           IFS+ YASS WCL+ELVKI+E K   GQ+V+P+FY VDPSD 
Sbjct: 81  IFSQNYASSSWCLDELVKIVECKKSKGQLVLPIFYKVDPSDV 122



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 52/208 (25%)

Query: 443 LLQEMGGEIVRQESIKDPGKR----SRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGG 498
           L + + G  +R   I++ GK      RL H +  Y  L E   +P      +L+ELYL  
Sbjct: 603 LKKNLVGLDLRHSLIRNLGKGFKDCKRLKHVDLSYSSLLEK--IPDFPATSNLEELYLNN 660

Query: 499 CSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
           C+NL+                     +P S+ +L +L+ LDL +CS L  + S L  LKS
Sbjct: 661 CTNLR--------------------TIPKSVVSLGKLLTLDLDHCSNLIKLPSYLM-LKS 699

Query: 559 LRRLNLSGCLKLEKLPE-----------------------EIGNLESLEYLNLAE-KDFE 594
           L+ L L+ C KLEKLP+                        IG+L  L  L+L +  + E
Sbjct: 700 LKVLKLAYCKKLEKLPDFSTASNLEXLYLKECTNLRMIHDSIGSLSKLVTLDLGKCSNLE 759

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           K+PS +  L  L  L L +CK+L+ +P+
Sbjct: 760 KLPSYL-TLKSLEYLNLAHCKKLEEIPD 786


>gi|15233862|ref|NP_192681.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|7267585|emb|CAB78066.1| putative protein [Arabidopsis thaliana]
 gi|332657347|gb|AEE82747.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1039

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 224/677 (33%), Positives = 342/677 (50%), Gaps = 80/677 (11%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MASSS+S +     ++DVFLSFRG D R+N VS+L+ AL    I TF DDK L  G+ IS
Sbjct: 1   MASSSTS-SPTRVKEYDVFLSFRGADTRNNIVSYLHKALVDVGIRTFKDDKELEEGDIIS 59

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC 119
             L +AI+ S  ++V+ SE Y +S WCL EL  I+E   +   IVVP+FY V+PSD  Y 
Sbjct: 60  EKLVNAIQTSWFAVVVLSEKYVTSSWCLEELRHIMELSIQDDIIVVPIFYKVEPSDVRYQ 119

Query: 120 PS---------------LGWMGI-----------FDIPTSESVLIEGNVNDISKKLSDLF 153
            +               L W G            F   + E+  I   V+ IS +L  + 
Sbjct: 120 KNSFEVKLQHYRDPEKILKWKGALTQVGNMSGKHFQTCSDEATNIAEIVSKISNRLRKMK 179

Query: 154 PSDNKDQLVGVESIIKEIESQLL---SGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
           P+D  + LVG+++ ++++  QLL      +E   +GI G+GGIGKT IA+ +Y+  S  +
Sbjct: 180 PTDLIN-LVGMDAHMEKM--QLLLDKEPKSEVRMIGILGMGGIGKTAIANYLYNQFSHEY 236

Query: 211 EGSYFMQ---NIRDESEKVGGLANIHLNFERRR--------------LSRMKVLIVFYDL 253
               F++   N  D +     L +   N E  +              L   K  +V   +
Sbjct: 237 WAHCFIEDAWNTNDPTHLQRKLLSHICNDENAKLFTREAGAMKIKGILKHKKFFLVIDGV 296

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
              +Q+  L      F PGS +IITTRD  LL +     V +V+EVK L   D+L +F +
Sbjct: 297 NKAEQVHALAKERSWFGPGSLIIITTRDRGLLNS---CGVNNVYEVKCLDSKDALQVFEK 353

Query: 314 NAF-GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESAVNKLKRMPHM 371
            AF G+N P  G   L     + A+G+P AL    S+L   +  E WE  + +L+  P  
Sbjct: 354 FAFGGRNPPFHGSERLFTRASQLAHGLPYALVAFASHLSEQTTIEGWEDELFRLEDYPQK 413

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG--ISRLVGKS 429
           +++++L+ SYD LD  EQ++FL  AC F G+  +L+  FL       K+G  I+ L  KS
Sbjct: 414 NVEEILRASYDDLDYYEQSVFLQVACLFNGSFLWLIRAFL------GKLGSRINSLRAKS 467

Query: 430 LVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINL 488
           L+ ISN+ ++ MH L++++G EIVRQ+S   P ++  LW PE+IY VL  N  L   +++
Sbjct: 468 LLDISNDGRLIMHFLVEQIGKEIVRQQSNCIPSEQKFLWKPEEIYDVLARNIFLKHVVDI 527

Query: 489 DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK- 547
            S  +L       +     I+  ++ L      +E LP S  + S LV+++L   S LK 
Sbjct: 528 TSKLQL-------ISDVSSITHGLKLLHWDAYPLETLPFSFQS-STLVEINL-RYSNLKH 578

Query: 548 ----SVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
               +   R   L +LRRL+++G   L +LP+   ++   E +    +   + P S+ +L
Sbjct: 579 FWDETKVYRSKQLPNLRRLDVTGSTSLVELPDLSDSMNLEELIMEGCRSLRQTPWSLNRL 638

Query: 604 SKLSDLRLQNCKRLQSL 620
             L  L +  C  L  L
Sbjct: 639 P-LRKLNMVKCDSLMGL 654



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 22/182 (12%)

Query: 491 LKELYLGGCSNLKRFPE-ISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLK 547
           L EL L   S ++  P+ I C  ++  +DL       LP ++  L++L  L L NC  LK
Sbjct: 770 LTELKLINLS-IREIPQDIDCLLSLRKMDLTGNDFVHLPKTMAQLTKLECLTLRNCRQLK 828

Query: 548 SVSSRLCNL---------KSLRRLNLSGCLKLEKLPEEIGNLE-SLEYLNLAEKDFEKIP 597
           ++      L         + L  L +  C  L+ L +++     SL YL+L+  DFE+IP
Sbjct: 829 ALPLLTPTLTLPGLDNQPRGLIELCIDNCKNLQSLQDQLLCYNTSLAYLDLSNHDFERIP 888

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLK--TLSNSSTLLTRSSKHW 654
           +S++ LS L+ L L+NCK+L+ + ELP   + ++A  C  L+  TLS + T+     KH 
Sbjct: 889 TSIRHLSSLNTLCLKNCKKLKYVEELPLSLNHLYAHGCDYLENVTLSPNHTI-----KHL 943

Query: 655 DI 656
           D+
Sbjct: 944 DL 945


>gi|42563187|ref|NP_177429.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332197262|gb|AEE35383.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1163

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 194/558 (34%), Positives = 286/558 (51%), Gaps = 69/558 (12%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MASSSSS    P  K+DVFLSFRG+D R N VSHL+  L  + + TF DDK L  G+ IS
Sbjct: 1   MASSSSS----PIWKYDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSIS 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY- 118
             +S AI+ S  ++VI SE YASS WCL+EL  +++   K    VVP+FY VDPS   + 
Sbjct: 57  EEISRAIQNSTYALVILSENYASSSWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVRHQ 116

Query: 119 -------------CPS--LGWMGI-----------FDIPTSESVLIEGNVNDISKKLSDL 152
                         P+    W              F+    E+ +IE  V DISKKL  +
Sbjct: 117 TGSFTFDKYQDSKMPNKVTTWREALTQIASLAGKDFETCEDEASMIEEIVKDISKKLLIM 176

Query: 153 FPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
            P D  D +VG+ + ++ +   L +    E   +GIWG+GGIGKTTIA  ++   S  F 
Sbjct: 177 QPVDFSD-IVGMNAHMERLSPLLSMDSENEVRMIGIWGMGGIGKTTIAKCLFDQFSQGFP 235

Query: 212 GSYFMQNIRDESEKVGGLANIHLNFE-----------------------RRRLSRMKVLI 248
              F++N+     K GG++++   F                        + R    KV +
Sbjct: 236 ARCFLENVSKIYRK-GGVSSLAEKFLSTTLGLSKKKMKGSGVKLGPQEIKARFGCRKVFV 294

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  ++ D++Q+         F PGSR+IITTRD  LL N  G R   V+EVK +  + +L
Sbjct: 295 VLDNVDDMRQMHAFAQESSWFGPGSRIIITTRDKGLL-NTYGVRT--VYEVKCMDNDAAL 351

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKY-ANGVPLALQVLGSYLKGMSE-EEWESAVNKLK 366
            LF++ AF    P +   E  +I   + A G+P+A++  G + + M+  +EW+ A+ +  
Sbjct: 352 QLFNQLAFKGALPPSELYEKLSIRASWLAQGLPVAIEAYGLFFRRMTSLKEWDDALCRFI 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLV 426
             P   + ++LK+SYDGL++ ++N+FL  AC F G         LD       +G+  L 
Sbjct: 412 EAPDESVMEILKISYDGLEETDKNVFLHVACLFNGEPLRRATTLLDDGVLQGCLGLKILA 471

Query: 427 GKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-TSLPT 484
            KSL+ I+ +  I MH+L+ +    IV QES++    R  LW+P +IY++L  N TS PT
Sbjct: 472 EKSLIEITASGYIKMHNLVDQTARAIVNQESMQRRHGRGVLWNPYEIYELLKRNTTSEPT 531

Query: 485 GI----NLDSLKELYLGG 498
                   D +  L+LGG
Sbjct: 532 NCMALHMCDMVYALHLGG 549



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 43/195 (22%)

Query: 501  NLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
            N+K  P+  C +   E LD      E LP ++  L RL      NC  LK++ +    L 
Sbjct: 927  NIKVIPDDVCGLKFLEKLDWSGNDFETLPETMNQLPRLKYASFRNCCRLKALPA----LV 982

Query: 558  SLRRLNLSGCLKLEKLPE------EIGNLESLE-----------------------YLNL 588
             L  + LSGC+ L+ L E      + G  + LE                       YL+L
Sbjct: 983  QLETIKLSGCINLQSLLELSYAEQDCGRFQWLELWVDGCKSIRSILDQLRHFIKLSYLDL 1042

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP-CGSSIHARHCTSLKTLSNSSTLL 647
            +  +FEK+PSS++ LS L  L L  CK+L+S+  LP C  S++A  C  L+T+S     L
Sbjct: 1043 SSHEFEKLPSSIEVLSSLRTLCLNKCKKLKSIEGLPLCLKSLYAHGCEILETVSLP---L 1099

Query: 648  TRSSKHWDIFNFSNC 662
              S KH D+   S+C
Sbjct: 1100 NHSVKHLDL---SHC 1111


>gi|8778469|gb|AAF79477.1|AC022492_21 F1L3.30 [Arabidopsis thaliana]
          Length = 1075

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 220/704 (31%), Positives = 334/704 (47%), Gaps = 115/704 (16%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R   VSHL AAL    I TF DD +L  G+ IS  L  A+  S  ++
Sbjct: 11  KYDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEIGDHISDELHRALGSSSFAV 70

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC-------------- 119
           V+ SE YA+SRWCL EL  I+E   +    V P+FY VDPS   +               
Sbjct: 71  VVLSENYATSRWCLLELQLIMELMKEGRLEVFPIFYGVDPSVVRHQLGSFSLVKYQGLEM 130

Query: 120 --PSLGWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVES 166
               L W    ++  +           E++++     DIS++++ +   D+ + +VG+++
Sbjct: 131 VDKVLRWREALNLIANLSGVVSSHCVDEAIMVGEIARDISRRVTLMHKIDSGN-IVGMKA 189

Query: 167 IIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV 226
            ++ +   L   S E   VGIWG+GGIGKT+I   +Y  +S  F    F++NI+  S K 
Sbjct: 190 HMEGLNHLLDQESNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPAHCFIENIKSVS-KD 248

Query: 227 GGLANIHLNFE----------------------RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
            G    HL  E                      ++RL   KV +V   +  + Q+  L  
Sbjct: 249 NGHDLKHLQKELLSSILCDDIRLWSVEAGCQEIKKRLGNQKVFLVLDGVDKVAQVHALAK 308

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF-GQNHPAA 323
             + F PGSR+IITTRD+ LL N  G  V  V+EVK L   D+L +F + AF G   P  
Sbjct: 309 EKNWFGPGSRIIITTRDMGLL-NTCGVEV--VYEVKCLDDKDALQMFKQIAFEGGLPPCE 365

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKG--MSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
           GF +LS    K A+G+P A+Q    +L+G   S EEWE A+  L+     +I ++LK+SY
Sbjct: 366 GFDQLSIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALGALESSLDENIMEILKISY 425

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITM 440
           +GL    QN+FL   C F G+    + + L      + + I  L  KSL+ IS N  + M
Sbjct: 426 EGLPKPHQNVFLHVVCLFNGDTLQRITSLLHGPIPQSSLWIRVLAEKSLIKISTNGSVIM 485

Query: 441 HDLLQEMGGEIVRQE------------------SIKDPGKRSRLW--HPEDIYQVLNENT 480
           H L+++MG EI+R +                  + +D G+++     H  D+  VL+   
Sbjct: 486 HKLVEQMGREIIRDDMSLARKFLRDPMEIRVALAFRDGGEQTECMCLHTCDMTCVLSMEA 545

Query: 481 SLPTGI-NLDSLK-------------------------ELYLGGCSNLKRFPEIS--CNI 512
           S+   + NL  LK                          L+      L+  P  S  C +
Sbjct: 546 SVVGRMHNLKFLKVYKHVDYRESNLQLIPDQPFLPRSLRLFHWDAFPLRALPSGSDPCFL 605

Query: 513 EDLDLKETAIEELPSSIGNLSRLVD----LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
            +L+L+ + +E L S  G  S  V      +  N +    +      LKSL+RL+++G  
Sbjct: 606 VELNLRHSDLETLWS--GTPSNGVKTENPCEKHNSNYFHVLLYLAQMLKSLKRLDVTGSK 663

Query: 569 KLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRL 611
            L++LP ++ ++ SLE L L +    E IP  + + S L  L+L
Sbjct: 664 HLKQLP-DLSSITSLEELLLEQCTRLEGIPECIGKRSTLKKLKL 706



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 30/191 (15%)

Query: 478  ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNI---EDLDLKETAIEELPSSIGNLSR 534
            E+ S     +   LKEL L    N+++ P   C++   E LDL     E LP ++ +LSR
Sbjct: 811  ESFSFDVFPDFPDLKELKLVNL-NIRKIPSGICHLDLLEKLDLSGNDFENLPEAMSSLSR 869

Query: 535  LVDLDLTNCSGLKSVS----------SRLCNLKSLRRLN---------------LSGCLK 569
            L  L L NC  L+ +           +   NL+SL +L+               L  C  
Sbjct: 870  LKTLWLQNCFKLQELPKLTQVQTLTLTNCRNLRSLAKLSNTSQDEGRYCLLELCLENCKS 929

Query: 570  LEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SS 628
            +E L +++ +   L  L+L+  DFE +PSS++ L+ L  L L NCK+L+S+ +LP     
Sbjct: 930  VESLSDQLSHFTKLTCLDLSNHDFETLPSSIRDLTSLVTLCLNNCKKLKSVEKLPLSLQF 989

Query: 629  IHARHCTSLKT 639
            + A  C SL+ 
Sbjct: 990  LDAHGCDSLEA 1000



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 4/90 (4%)

Query: 555 NLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
           +LK L+ +NL+    + K+P  I +L+ LE L+L+  DFE +P +M  LS+L  L LQNC
Sbjct: 823 DLKELKLVNLN----IRKIPSGICHLDLLEKLDLSGNDFENLPEAMSSLSRLKTLWLQNC 878

Query: 615 KRLQSLPELPCGSSIHARHCTSLKTLSNSS 644
            +LQ LP+L    ++   +C +L++L+  S
Sbjct: 879 FKLQELPKLTQVQTLTLTNCRNLRSLAKLS 908


>gi|297819854|ref|XP_002877810.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323648|gb|EFH54069.1| hypothetical protein ARALYDRAFT_323710 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1251

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 204/689 (29%), Positives = 321/689 (46%), Gaps = 125/689 (18%)

Query: 17  DVFLSF--RGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           DV++SF  R   VR++FVSHL+AA  R  + +F  +    G++   +  S +E S+ S+V
Sbjct: 6   DVYISFDRREDTVRYSFVSHLSAAFHRRGVSSFTGE---HGSDSETNGFSKLEKSRASVV 62

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----------DAGYCPSLGW 124
           +FSE Y SS+ C+ EL+K+ E + K    VVPVFY V  S          D         
Sbjct: 63  VFSEKYPSSKSCMEELLKVSEHRRKNCLAVVPVFYPVTKSFVKKQICNLADVRSDWRTAL 122

Query: 125 MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNT 184
           +   D+P  E    + + + + + ++D+    N    +G+ S + +IE+ +        +
Sbjct: 123 LETVDLPGHELYDTQSDSDFVVEIVADVREKLNMTDNIGIYSKLGKIETLIYKQPWGVRS 182

Query: 185 VGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--GLANIHLNFERRR-- 240
           +GIWG+ GIGKTT+A A +  +S  +E S F+++      + G  GL  +H     R   
Sbjct: 183 IGIWGMPGIGKTTLAKAAFDQLSGDYEASCFIRDFHKAFHEKGLYGLLEVHFGKILREEL 242

Query: 241 ---------------LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLL 285
                          L   +VL+V  D+      +  +G  D F PGS +IIT+RD Q+ 
Sbjct: 243 GINSSITRPILLTNVLRHKRVLVVLDDVCKPLDAESFLGGFDWFCPGSLIIITSRDKQVF 302

Query: 286 KNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQV 345
                 RV  ++EV  L+  ++L LFSR AFG++       +LS  VI YANG PL L  
Sbjct: 303 S---LCRVNQIYEVPGLNEEEALQLFSRCAFGKDIRNETLQKLSMKVINYANGNPLVLTF 359

Query: 346 LGSYLKGMSEEE---WESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGN 402
            G     MS E     E    KLK+    +I   +K +YD L   E+NIFLD AC F+G 
Sbjct: 360 FGC----MSRENPRLREMTFLKLKKYLAHEIHDAVKSTYDSLSSNEKNIFLDIACLFRGE 415

Query: 403 DQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGK 462
           +   VM+ L+ C F +++ I+ LV K LV+I+  ++ MH+L+Q +G EI     I    +
Sbjct: 416 NVDCVMHLLEGCGFFSRVEINVLVEKCLVSIAEGRVVMHNLIQSIGHEI-----INGGKR 470

Query: 463 RSRLWHP---------------EDIYQVLNENTSLPTGINLDSLKELY-----------L 496
           RSRLW P               EDI  +  + ++L   +N  + + +Y            
Sbjct: 471 RSRLWKPSRIKYFLEDTQVLGSEDIEAIYLDPSALSFDVNPLAFENMYNLRYLKIFSSNP 530

Query: 497 GGCSNL------------------KRFPEISC-------NIEDLDLKETAIEEL---PSS 528
           G  S L                  ++FP +S        N+  L++  + I+ L      
Sbjct: 531 GNHSALHLPKGVKSLPEELRLLHWEQFPLLSLPQDFNTRNLVILNMCYSKIQRLWEGTKE 590

Query: 529 IGNLSR--------LVDL-DLTNCSGLKSVSSRLC----------NLKSLRRLNLSGCLK 569
           +G L R        LVD+ +L N   ++ +  + C          + + LR +NLSGC+K
Sbjct: 591 LGMLKRIMLCHSQQLVDIQELQNARNIEVIDLQGCARLQRFIATGHFQHLRVINLSGCIK 650

Query: 570 LEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           ++  PE   N+E    L L +     IP+
Sbjct: 651 IKSFPEVPPNIEE---LYLKQTGLRSIPT 676



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/148 (45%), Positives = 88/148 (59%), Gaps = 4/148 (2%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           +V +E+ SL   + L  LK L L  C  L+    I  N+  L L  TAI+ELPS + +LS
Sbjct: 699 EVSSESQSLSIMVYLKYLKVLDLSHCLGLEDIHGIPKNLRKLYLGGTAIQELPS-LMHLS 757

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
            LV LDL NC  L+ +   + NL SL  LNLSGC +LE +    G   +LE L LA    
Sbjct: 758 ELVVLDLENCKRLEKLPMGIGNLSSLAVLNLSGCSELEDIQ---GIPRNLEELYLAGTAI 814

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +++PSS+K LS+L  L LQNCKRL+ LP
Sbjct: 815 QEVPSSIKHLSELVVLDLQNCKRLRHLP 842



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 109/259 (42%), Gaps = 86/259 (33%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI----------- 529
            LP GI NL SL  L L GCS L+    I  N+E+L L  TAI+E+PSSI           
Sbjct: 773  LPMGIGNLSSLAVLNLSGCSELEDIQGIPRNLEELYLAGTAIQEVPSSIKHLSELVVLDL 832

Query: 530  -------------GNLSRLVDLDLTNCSGL--KSVSS----------------------- 551
                         GNL  LV L LT+ SG+  + VS+                       
Sbjct: 833  QNCKRLRHLPMEIGNLKSLVTLKLTDPSGMSIREVSTSIIQNGISEINISNLNYLLFTVN 892

Query: 552  -------------------------RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
                                     R   L SL   N S    L  +PEEI +L S+  L
Sbjct: 893  ENADQRREHLPQPRLPSSSLHGLVPRFYALVSLSLFNAS----LMHIPEEICSLPSVVLL 948

Query: 587  NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNSST 645
            +L    F KIP S+KQLSKL  LRL++C+ L SLP LP    +   H C SL+++S    
Sbjct: 949  DLGRNGFSKIPESIKQLSKLHSLRLRHCRNLISLPVLPQSLKLLNVHGCVSLESVSWG-- 1006

Query: 646  LLTRSSKHWDIFNFSNCSN 664
               +   H   + FS+C N
Sbjct: 1007 -FEQFPSH---YTFSDCFN 1021


>gi|342365831|gb|AEL30364.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 874

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 184/541 (34%), Positives = 279/541 (51%), Gaps = 74/541 (13%)

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           LVG++S ++ + + +  G  +   + IWG+GGIGKTTIA A++  I S FE S F+ ++R
Sbjct: 4   LVGIDSRVEGVINLIGLGLNDVRYMVIWGMGGIGKTTIARAVFETIRSRFEVSCFLADVR 63

Query: 221 DESEKVGGL--------------ANIHLNFERRRLSRMKVLIVFY-----DLTDLKQIDL 261
           +  EK   +                ++  ++ RR+ +  + +        D+   KQ++ 
Sbjct: 64  EHCEKKDTVHIQKQLLDQMNISSYAVYNKYDGRRIIQNSLCLKKVLLVLDDVNHEKQLED 123

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  D F PGSR+IITTRDV++LK   G  V  +++V+ L  +++L LF   AF Q  P
Sbjct: 124 LAGEKDWFGPGSRIIITTRDVEVLK---GPEVHEIYKVEGLVESEALNLFCLKAFKQQEP 180

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEE-WESAVNKLKRMPHMDIQKVLKVS 380
             GFL+LS  V+KY+ G+PLAL+VLGSYL G  E+   E   N    +        LK+S
Sbjct: 181 TEGFLDLSKEVVKYSGGLPLALKVLGSYLNGQKEKSSHEDNYNIFMGV------STLKIS 234

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT- 439
           Y+GL+D E++IFLD ACFFKG  ++ V   L  C + A+IG+  L+ +SLVT+   KI  
Sbjct: 235 YEGLEDTEKDIFLDIACFFKGRQKHHVTEMLKRCGYQAEIGLDILINRSLVTLEEVKILG 294

Query: 440 -----MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDI---------------------- 472
                MHDLL+EMG +IV QES  D  KRSRLW  ED+                      
Sbjct: 295 MVTLGMHDLLEEMGKQIVIQESPNDASKRSRLWCYEDVDFVLTQKKESEATHSIVSKVYY 354

Query: 473 ---------YQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE 523
                    Y+ + EN    +  N+  LK L L G  N     +I C ++ L  +   +E
Sbjct: 355 CETEEEWREYREIKENWRDLSFSNICQLKLLILDG-VNAPILCDIPCTLKVLHWEGCPME 413

Query: 524 ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
            LP +      LV++DL++   ++    +   LK L  LNL  C KL++ P ++    +L
Sbjct: 414 TLPFT-DQCYELVEIDLSHGKIVELWDGKKV-LKKLEHLNLYFCEKLKQTP-DLSGAPNL 470

Query: 584 EYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKT 639
           + LNL   K+   I  S+    +L +L L  C+ L++L    E+     ++   C SL+ 
Sbjct: 471 KTLNLHGCKELNYINPSLAHHKRLVELNLGRCRSLETLGDKLEISSLEKLNLYECRSLRR 530

Query: 640 L 640
           L
Sbjct: 531 L 531



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 55/199 (27%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEIS-C--NIEDLDLKETAIEELPSSIGNLSRLVD 537
           +L   + + SL++L L  C +L+R PE   C   +  LDL++T IEELP ++G L+ + +
Sbjct: 507 TLGDKLEISSLEKLNLYECRSLRRLPEFGECMKQLSILDLEKTGIEELPPTLGKLAGVSE 566

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY------------ 585
           LDLT C  L S+   L     L++L LS  ++L  +P     LESLE             
Sbjct: 567 LDLTGCHKLTSLPFPLGCFVGLKKLKLSRFVELSCVPYTTHGLESLEAWDFSNSPIFVGL 626

Query: 586 ----------------------------------------LNLAEKDFEKIPSSMKQLSK 605
                                                   L+L   DF ++P  +  L +
Sbjct: 627 LCSLSRLTSLSSLKLHGEYSRSREVSTLYYDLGHLTSLTDLDLGYSDFLRVPICIHALPR 686

Query: 606 LSDLRLQNCKRLQSLPELP 624
           L+ L L  C  L+ LPELP
Sbjct: 687 LTRLDLCYCYNLEVLPELP 705



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 5/145 (3%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           L  L+ L L  C  LK+ P++S   N++ L+L     +  +  S+ +  RLV+L+L  C 
Sbjct: 444 LKKLEHLNLYFCEKLKQTPDLSGAPNLKTLNLHGCKELNYINPSLAHHKRLVELNLGRCR 503

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
            L+++  +L  + SL +LNL  C  L +LPE    ++ L  L+L +   E++P ++ +L+
Sbjct: 504 SLETLGDKL-EISSLEKLNLYECRSLRRLPEFGECMKQLSILDLEKTGIEELPPTLGKLA 562

Query: 605 KLSDLRLQNCKRLQSLPELPCGSSI 629
            +S+L L  C +L SLP  P G  +
Sbjct: 563 GVSELDLTGCHKLTSLP-FPLGCFV 586


>gi|357500729|ref|XP_003620653.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
 gi|355495668|gb|AES76871.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
          Length = 1235

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 234/739 (31%), Positives = 358/739 (48%), Gaps = 124/739 (16%)

Query: 3   SSSSSINMIPHPK---HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEI 58
           SS+SS+ ++   +   +DVF++FRG+D R+NF  +L  AL  + I  F DD  L +G  I
Sbjct: 4   SSNSSLALVTSSRRNYYDVFVTFRGEDTRNNFTDYLFDALETKGIYAFRDDTNLKKGEVI 63

Query: 59  SPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG- 117
            P L  AIEGS++ + +FS  YASS WCL EL KI E      + V+PVFY +DPS+   
Sbjct: 64  GPELLRAIEGSQVFVAVFSRNYASSTWCLQELEKICECVQGPEKHVLPVFYDIDPSEVRK 123

Query: 118 ----YCPSL----------------------------GWMGIFDIPTS-ESVLIEGNVND 144
               YC S                             GW  + D P + E   I  N+ +
Sbjct: 124 QSGIYCESFVKHEQRFQQDPHKVSRWREALNQVGSISGW-DLRDKPQAGEIKKIVQNIMN 182

Query: 145 ISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIY 203
           I    S     D    LVG+ S I+ +++ LL  S +    +GI G+GGIGKTT+A  +Y
Sbjct: 183 ILDCKSSFISKD----LVGINSRIEVLQNHLLLDSVDGVCAIGICGMGGIGKTTLAMTLY 238

Query: 204 SNISSHFEGSYFMQNI--------------RDESEKVGGLANIHL-------NFERRRLS 242
             IS  F  S F+ ++              R    +  G+ +  +       +  RRRL 
Sbjct: 239 GQISHQFSASCFIDDVSKIYRLYDGPLDAQRQILLQTVGIEHHQICNRYSATDLIRRRLR 298

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             K L++F ++  ++Q++ +    +    GSR++I +RD  +LK +    V  V++V  +
Sbjct: 299 HEKALLIFDNVDQVEQLEKIAVHREWLGAGSRIVIISRDEHILKEYG---VDVVYKVPLM 355

Query: 303 SYNDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESA 361
           +  DS  LF R AF  +    + +  L+N ++ YA G+PLA++VLGS+L G S  EW+SA
Sbjct: 356 NSTDSYELFCRKAFKVEKIIMSDYQNLANEILDYAKGLPLAIKVLGSFLFGHSVAEWKSA 415

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
           + +L+  PH D+  VL +S+DG                    +  V N L+ C F A IG
Sbjct: 416 LARLRESPHNDVMDVLHLSFDG-------------------PEKYVKNVLNCCGFHADIG 456

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
           +  L+ KSL++I +  I MH LL+E+G +IV++ S K+  K SR+W  + +Y V+ EN  
Sbjct: 457 LGVLIDKSLISIEDANIKMHSLLEELGRKIVQENSSKEQRKWSRIWSKKQLYNVMMENME 516

Query: 482 LPT--------GINLD----------SLKELYLGGCSNLKRFP------EISC---NIED 514
                      GI+++           L  +Y     N   +       ++SC    +  
Sbjct: 517 EHVEAIFLNDDGIDMNVEHFSKMSNLRLLIIYNNSAWNYTTYKRPCFHGKLSCLSNKLRY 576

Query: 515 LDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
            D +     ELP S  + + LV+L L N S  K +        +L+ L+LS   K+EK+ 
Sbjct: 577 FDWEHYPFWELPLSF-HPNELVELILKN-SSFKQLWKSKKYFPNLKALDLSDS-KIEKII 633

Query: 575 E--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP-ELPCGSSIHA 631
           +  E  NLESL  L   EK  E + SS+  L KL  L L  C  L S+P  + C SS+  
Sbjct: 634 DFGEFPNLESLN-LERCEKLVE-LDSSIGLLRKLVYLNLDYCINLVSIPNSIFCLSSLED 691

Query: 632 RH-CTSLKTLSNSSTLLTR 649
            + C   K  +NS  L+ +
Sbjct: 692 LYMCGCSKVFNNSRNLIEK 710



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 81/153 (52%), Gaps = 31/153 (20%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE-------LPSSIGN 531
            S+P  I  L SL++LY+ GCS      ++  N  +L  K+  I E       LP+   N
Sbjct: 677 VSIPNSIFCLSSLEDLYMCGCS------KVFNNSRNLIEKKHDINESFHKWIILPTPTRN 730

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
                    T C  L S+ S  C    LR++++S C  L ++P+ I  L SLE L LA  
Sbjct: 731 ---------TYC--LPSLHSLYC----LRQVDISFC-HLNQVPDAIEGLHSLERLYLAGN 774

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            F  +PS +++LSKL  L LQ+CK L+SLP+LP
Sbjct: 775 YFVTLPS-LRKLSKLEYLDLQHCKLLESLPQLP 806


>gi|238478954|ref|NP_001154443.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196039|gb|AEE34160.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1004

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 222/731 (30%), Positives = 336/731 (45%), Gaps = 129/731 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           + +SSSS N     K+ VF SF G DVR   +SH+        I  F D  + R  EI+P
Sbjct: 3   LLASSSSCNY----KYIVFPSFHGPDVRKTLLSHMRKQFDFNGITMFDDQGIERSEEIAP 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
           SL  AI+ S+ISIVI S+ YASS WCL+ELV IL+ K    QIV+ VFY V+P +     
Sbjct: 59  SLKKAIKESRISIVILSKKYASSSWCLDELVDILKRKKAMKQIVMTVFYGVEPFEVR--N 116

Query: 121 SLGWMGI-------------------------------FDIPTSESVLIEGNVNDISKKL 149
             G  GI                               F    +E+  IE    D+S KL
Sbjct: 117 QTGEFGIAFNETCARKTDEERQKWSKALNEVANIAGEDFLRCDNEAKRIEKIARDVSNKL 176

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
            +  P  + D +VG+E+ + E+ES L         VGI G  GIGKTTIA A+ S  S+ 
Sbjct: 177 -NATPCRDFDGMVGLEAHLTEMESLLDLDYDGVKMVGISGPAGIGKTTIAKALQSRFSNR 235

Query: 210 FEGSYFMQNIRDESEKVGGLANIHLNFE-------------------RRRLSRMKVLIVF 250
           F+ + F+ N+R     + GL  + L  +                     RL +++VLI+ 
Sbjct: 236 FQLTCFVDNLR--GSYLSGLDELRLQEQFLSNVLNQDGIRINHSGVIEERLCKLRVLIIL 293

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+  +KQ++ L  +   F P SR+++TT + +LL+    S                   
Sbjct: 294 DDVDHIKQLEALANKTTWFGPRSRIVVTTENKELLQQEWKS------------------- 334

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
                    +P  GF  L+  V +    +PL L ++GS L+G +EE WE  +  L+    
Sbjct: 335 ---------YPQKGFQWLALRVTQLCGKLPLGLCMVGSSLRGKNEEGWEEVICSLENNID 385

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
            DI++VL+V Y+ LDD E+ +FL  A FF     +LV           K  +  L  +SL
Sbjct: 386 RDIEEVLRVGYESLDDNEKTLFLHIAIFFNNQYVHLVERLFADGDLDFKRALKILENRSL 445

Query: 431 VTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP------ 483
           + IS +++I MH LLQ++G + ++++   +P KR  L    +I  VL  +T         
Sbjct: 446 IEISFSSRIVMHRLLQQVGKKAIQKQ---EPLKRQILMDAREICYVLENDTDTRYVSAIL 502

Query: 484 ---TGINLDSLKELYLGGCSNLKRFPEISCNIED----LDLKETAIEELPSSIGNL---- 532
              +GI+   ++E      SNL RF  +  + +D    +D+ +    E P  +  L    
Sbjct: 503 FDISGIDEVYIREGAFRRMSNL-RFLTVYKSKDDGNDIMDIPKRM--EFPRRLRILKWEA 559

Query: 533 ------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
                         LV+L + N S L+ +      LK+L+ +NL G   L+ LP  + N 
Sbjct: 560 YPNKCFPPKFHPEYLVELVMKN-SKLEYLWQGTQPLKNLKEMNLKGSSNLKALP-NLSNA 617

Query: 581 ESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTS 636
             +E L L++ K   +IPSS   L +L  LRL+ C  L+ +P    L     +  R C+ 
Sbjct: 618 TKMEILKLSDCKSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADMNLEFLYDLDMRGCSR 677

Query: 637 LKTLSNSSTLL 647
           L+ +   ST L
Sbjct: 678 LRNIPVMSTRL 688



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 56/247 (22%)

Query: 467 WHPEDIYQVLNENTSLP---TGIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE- 519
           +HPE + +++ +N+ L     G   L +LKE+ L G SNLK  P +S    +E L L + 
Sbjct: 569 FHPEYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSDC 628

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----- 574
            ++ E+PSS  +L RL  L L  C  L+ + + + NL+ L  L++ GC +L  +P     
Sbjct: 629 KSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADM-NLEFLYDLDMRGCSRLRNIPVMSTR 687

Query: 575 -----------EEI------------------GNLESL-------EYLNLAEKDFEKIPS 598
                      E++                    L  L       E+L+L+    E+IP+
Sbjct: 688 LYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGIERIPN 747

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHW--D 655
            +K    L  L +  C+RL SLPELP     + A  C SL+T+        ++SK W  +
Sbjct: 748 CIKDRYLLKSLTISGCRRLTSLPELPASLKFLVADDCESLETV----FCPFKTSKCWPFN 803

Query: 656 IFNFSNC 662
           IF F+NC
Sbjct: 804 IFEFTNC 810


>gi|356573485|ref|XP_003554889.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1134

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 196/537 (36%), Positives = 294/537 (54%), Gaps = 64/537 (11%)

Query: 159 DQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQ 217
           D  VG+ES + E+   L  G+ +  + +GI GIGGIGKTT+A A+Y+ ++ HF+GS F++
Sbjct: 254 DYPVGLESQVLEVVKLLDVGANDGVHMIGIHGIGGIGKTTLALAVYNYVADHFDGSCFLE 313

Query: 218 NIRDESEKVG------------------GLANIH--LNFERRRLSRMKVLIVFYDLTDLK 257
           N+R+ S+K G                   +A +   ++  + RL R KVL++  D+   +
Sbjct: 314 NVRENSDKHGLQHLQSIILSELVKENKMNIATVKQGISMIQHRLQRKKVLLIVDDVDKPE 373

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+  ++GR D F  GSR+IITTRD +LL +H   R    +EV EL+ ND+L L +  AF 
Sbjct: 374 QLQAIVGRPDWFGSGSRIIITTRDEKLLASHEVRRT---YEVNELNRNDALQLLTWEAFK 430

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
                  + E+ N V+ YA+G+PLAL+V+GS L G S +EW+SA+N+ +R+P+  I K+L
Sbjct: 431 MQKVDPSYEEMLNRVVTYASGLPLALKVIGSNLFGKSIQEWKSAINQYQRIPNNQILKIL 490

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSA-KIGISRLVGKSLVTIS-- 434
           KVS+D L++EE+++FLD AC FKG +   V + L A      K  I  L+ KSL+ +S  
Sbjct: 491 KVSFDALEEEEKSVFLDIACCFKGCELEEVEDILHAHYGDCMKYHIGVLIDKSLLKLSVH 550

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKEL 494
              +T+HDL+++MG EIVRQES KDPGKRSRLW  EDI QVL +NT   + I +  L   
Sbjct: 551 GTMVTLHDLIEDMGREIVRQESPKDPGKRSRLWFHEDIIQVLEDNTG-TSEIEIICLNFP 609

Query: 495 YLGGCS----NLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL------DLTNCS 544
            L        N K F ++  N++ L +K     + P  + N  R+++       DL   S
Sbjct: 610 LLDKEDIVEWNRKAFKKMK-NLKTLIIKSGHFCKGPRYLPNSLRVLEWWRYPSHDLP--S 666

Query: 545 GLKSVSSRLCNLK-----------------SLRRLNLSGCLKLEKLPEEIG--NLESLEY 585
             +S    +C L                  S+R LNL  C  L ++P+  G  NLE L +
Sbjct: 667 DFRSKKLGICKLPHCCFTSLELVGFLTKFMSMRVLNLDKCKCLTQIPDVSGLPNLEKLSF 726

Query: 586 LNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS--SIHARHCTSLKTL 640
            +   ++   I SS+  L KL  L    C +L S P +   S   ++   C SL++ 
Sbjct: 727 QHC--QNLTTIHSSIGFLYKLKILSAFGCTKLVSFPPIKLTSLEKLNLSRCHSLESF 781



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 74/104 (71%), Gaps = 2/104 (1%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D RH FV +L  AL  + I TFIDD KL  G EI+P+L  AIE S+I+I 
Sbjct: 73  YDVFLSFRGSDTRHGFVGNLYKALNDKGIHTFIDDEKLQGGEEITPTLMKAIEESQIAIT 132

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
           + S  YASS +CL+ELV I++ K K G +V+PVFY +DPSD  +
Sbjct: 133 VLSHNYASSSFCLDELVHIIDCKRK-GLLVLPVFYNLDPSDVRH 175



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 40/202 (19%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISC---NIEDLDLKETAIEELPSSIGNLSRLV 536
            S P  I L SL++L L  C +L+ FPEI     NI +L  + T+I+ELPSSI NL+RL 
Sbjct: 757 VSFPP-IKLTSLEKLNLSRCHSLESFPEILGKMENIRELQCEYTSIKELPSSIHNLTRLQ 815

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRL---NLSG--CLKLEKLPEEIGN------------ 579
           +L L NC G+  + S +  +  L  L      G   LK E+  E+ G+            
Sbjct: 816 ELQLANC-GVVQLPSSIVMMPELTELIGWKWKGWQWLKQEEGEEKFGSSIVSSKVELLWA 874

Query: 580 ----------------LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                              ++ LNL++ +F  +P  +K+   L  L + +CK LQ +  +
Sbjct: 875 SDCNLYDDFFSIGFTRFAHVKDLNLSKNNFTMLPECIKEFQFLRKLNVNDCKHLQEIRGI 934

Query: 624 PCGSSIHARHCTSLKTLSNSST 645
           P   S+     T+ K+L++SST
Sbjct: 935 P--PSLKHFLATNCKSLTSSST 954



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 490 SLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCSGL 546
           S++ L L  C  L + P++S   N+E L  +    +  + SSIG L +L  L    C+ L
Sbjct: 697 SMRVLNLDKCKCLTQIPDVSGLPNLEKLSFQHCQNLTTIHSSIGFLYKLKILSAFGCTKL 756

Query: 547 KSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
             VS     L SL +LNLS C  LE  PE +G +E++  L       +++PSS+  L++L
Sbjct: 757 --VSFPPIKLTSLEKLNLSRCHSLESFPEILGKMENIRELQCEYTSIKELPSSIHNLTRL 814

Query: 607 SDLRLQNCKRLQ------SLPEL 623
            +L+L NC  +Q       +PEL
Sbjct: 815 QELQLANCGVVQLPSSIVMMPEL 837


>gi|22330404|ref|NP_176561.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196018|gb|AEE34139.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 992

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 212/682 (31%), Positives = 333/682 (48%), Gaps = 116/682 (17%)

Query: 47  FIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVP 106
           F D  + RG  ISP L+  I  S+ISIV+ S+ YASS WCL+EL++IL+ K   GQIV+ 
Sbjct: 2   FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMT 61

Query: 107 VFYLVDPSDAG------------------------YCPSLGWMG-----IFDIPTSESVL 137
           VFY VDPSD                          +  +L  +G      F    +ES +
Sbjct: 62  VFYGVDPSDVRKQTGDILKVFKKTCSGKTEEKRRRWSQALNDVGNIAGEHFLNWDNESKM 121

Query: 138 IEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKT 196
           +E    DIS K++     D +D +VGVE+ +++I+S L L    E   VGI+G  GIGKT
Sbjct: 122 MEKIARDISNKVNTTISRDFED-MVGVETHLEKIQSLLHLDNDDEAMIVGIYGPAGIGKT 180

Query: 197 TIASAIYSNISSHFEGSYFMQNIR-------DE-----------SEKV---GGLANIHLN 235
           TIA A++S +S  F+ + FM+N+R       DE             K+    G+   +L+
Sbjct: 181 TIARALHSLLSDRFQLTCFMENLRGSYNSSLDEYGLKLQLQEQLLSKILNQTGMRVYNLS 240

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             +  L   KVLI+  D+ DLKQ++ L      F PGSRV++TT + +LLK H    + +
Sbjct: 241 AIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQH--DDIKN 298

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            + V   +  ++  +F R  F Q+ P  GF  LS  VIK  + +PL L V+G YL+  +E
Sbjct: 299 TYYVDFPTQKEARQIFCRYGFKQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLRKKTE 358

Query: 356 EEWESAVNKLKR---MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
           ++WE  +++L+        +I++VL+V YDGL +++Q +FL  A FF   D   V   L 
Sbjct: 359 DDWEDILHRLESSFDSVDRNIERVLRVGYDGLHEKDQLLFLLIAFFFNYKDDDHVKAMLA 418

Query: 413 ACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
               + ++G+  L  KSL+  S+   I MH LLQ++G E V+++   +P KR  L    +
Sbjct: 419 DNNLNVRLGLKTLEYKSLIQRSSGGNIVMHKLLQQVGREAVQRQ---EPWKRQILIDAHE 475

Query: 472 IYQVLNEN-------------TSLPTGINLDS-----LKELYLGGCSNLKRFPEISCNIE 513
           I  VL  +             +++P G+++ +     ++ L        +R   +  N+ 
Sbjct: 476 ICNVLETDSGCANVMGISFNVSTIPNGVHISAKAFQNMRNLRFLSIYETRRDVNLRVNVP 535

Query: 514 D--------------------------------LDLKETAIEELPSSIGNLSRLVDLDLT 541
           D                                L+L+   +E+L      L+ L  L+L 
Sbjct: 536 DDMDFPHRLRSLHWEVYPGKSLPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELC 595

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL--NLAEKDFEKIPSS 599
               LK +   L +  +L+RL+L+GC  L ++P  +GNL  LE L  NL  +  + +P+ 
Sbjct: 596 GSLRLKELPD-LSSATNLKRLDLTGCWSLVEIPSSVGNLHKLEELEMNLCLQ-LQVVPTH 653

Query: 600 MKQLSKLSDLRLQNCKRLQSLP 621
              L+ L  LR+  C  L+  P
Sbjct: 654 F-NLASLRSLRMLGCWELRKFP 674



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 92/196 (46%), Gaps = 44/196 (22%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +L +L L G   LK  P++S   N++ LDL    ++ E+PSS+GNL +L +L++  C 
Sbjct: 586 LTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPSSVGNLHKLEELEMNLCL 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL--------------------- 583
            L+ V +   NL SLR L + GC +L K P    N+ SL                     
Sbjct: 646 QLQVVPTHF-NLASLRSLRMLGCWELRKFPGISTNITSLVIGDAMLEEMLESIRLWSCLE 704

Query: 584 -------------EYLNLAEK---DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
                          + L EK   D E+IP  +K L  L  L +  C +L SLPELP GS
Sbjct: 705 TLVVYGSVITHNFWAVTLIEKMGTDIERIPDCIKDLPALKSLYIGGCPKLFSLPELP-GS 763

Query: 628 --SIHARHCTSLKTLS 641
              +    C SLKT+S
Sbjct: 764 LRRLTVETCESLKTVS 779


>gi|238478956|ref|NP_001154444.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332196040|gb|AEE34161.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 988

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 222/731 (30%), Positives = 336/731 (45%), Gaps = 129/731 (17%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           + +SSSS N     K+ VF SF G DVR   +SH+        I  F D  + R  EI+P
Sbjct: 3   LLASSSSCNY----KYIVFPSFHGPDVRKTLLSHMRKQFDFNGITMFDDQGIERSEEIAP 58

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
           SL  AI+ S+ISIVI S+ YASS WCL+ELV IL+ K    QIV+ VFY V+P +     
Sbjct: 59  SLKKAIKESRISIVILSKKYASSSWCLDELVDILKRKKAMKQIVMTVFYGVEPFEVRN-- 116

Query: 121 SLGWMGI-------------------------------FDIPTSESVLIEGNVNDISKKL 149
             G  GI                               F    +E+  IE    D+S KL
Sbjct: 117 QTGEFGIAFNETCARKTDEERQKWSKALNEVANIAGEDFLRCDNEAKRIEKIARDVSNKL 176

Query: 150 SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH 209
            +  P  + D +VG+E+ + E+ES L         VGI G  GIGKTTIA A+ S  S+ 
Sbjct: 177 -NATPCRDFDGMVGLEAHLTEMESLLDLDYDGVKMVGISGPAGIGKTTIAKALQSRFSNR 235

Query: 210 FEGSYFMQNIRDESEKVGGLANIHLNFE-------------------RRRLSRMKVLIVF 250
           F+ + F+ N+R     + GL  + L  +                     RL +++VLI+ 
Sbjct: 236 FQLTCFVDNLR--GSYLSGLDELRLQEQFLSNVLNQDGIRINHSGVIEERLCKLRVLIIL 293

Query: 251 YDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTL 310
            D+  +KQ++ L  +   F P SR+++TT + +LL+    S                   
Sbjct: 294 DDVDHIKQLEALANKTTWFGPRSRIVVTTENKELLQQEWKS------------------- 334

Query: 311 FSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPH 370
                    +P  GF  L+  V +    +PL L ++GS L+G +EE WE  +  L+    
Sbjct: 335 ---------YPQKGFQWLALRVTQLCGKLPLGLCMVGSSLRGKNEEGWEEVICSLENNID 385

Query: 371 MDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSL 430
            DI++VL+V Y+ LDD E+ +FL  A FF     +LV           K  +  L  +SL
Sbjct: 386 RDIEEVLRVGYESLDDNEKTLFLHIAIFFNNQYVHLVERLFADGDLDFKRALKILENRSL 445

Query: 431 VTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLP------ 483
           + IS +++I MH LLQ++G + ++++   +P KR  L    +I  VL  +T         
Sbjct: 446 IEISFSSRIVMHRLLQQVGKKAIQKQ---EPLKRQILMDAREICYVLENDTDTRYVSAIL 502

Query: 484 ---TGINLDSLKELYLGGCSNLKRFPEISCNIED----LDLKETAIEELPSSIGNL---- 532
              +GI+   ++E      SNL RF  +  + +D    +D+ +    E P  +  L    
Sbjct: 503 FDISGIDEVYIREGAFRRMSNL-RFLTVYKSKDDGNDIMDIPKRM--EFPRRLRILKWEA 559

Query: 533 ------------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
                         LV+L + N S L+ +      LK+L+ +NL G   L+ LP  + N 
Sbjct: 560 YPNKCFPPKFHPEYLVELVMKN-SKLEYLWQGTQPLKNLKEMNLKGSSNLKALP-NLSNA 617

Query: 581 ESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE---LPCGSSIHARHCTS 636
             +E L L++ K   +IPSS   L +L  LRL+ C  L+ +P    L     +  R C+ 
Sbjct: 618 TKMEILKLSDCKSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADMNLEFLYDLDMRGCSR 677

Query: 637 LKTLSNSSTLL 647
           L+ +   ST L
Sbjct: 678 LRNIPVMSTRL 688



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 56/247 (22%)

Query: 467 WHPEDIYQVLNENTSLP---TGIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE- 519
           +HPE + +++ +N+ L     G   L +LKE+ L G SNLK  P +S    +E L L + 
Sbjct: 569 FHPEYLVELVMKNSKLEYLWQGTQPLKNLKEMNLKGSSNLKALPNLSNATKMEILKLSDC 628

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP----- 574
            ++ E+PSS  +L RL  L L  C  L+ + + + NL+ L  L++ GC +L  +P     
Sbjct: 629 KSLVEIPSSFSHLQRLEKLRLRGCISLEVIPADM-NLEFLYDLDMRGCSRLRNIPVMSTR 687

Query: 575 -----------EEI------------------GNLESL-------EYLNLAEKDFEKIPS 598
                      E++                    L  L       E+L+L+    E+IP+
Sbjct: 688 LYFLNISETAVEDVSASITSWHHVTHLSINSSAKLRGLTHLPRPVEFLDLSYSGIERIPN 747

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHW--D 655
            +K    L  L +  C+RL SLPELP     + A  C SL+T+        ++SK W  +
Sbjct: 748 CIKDRYLLKSLTISGCRRLTSLPELPASLKFLVADDCESLETV----FCPFKTSKCWPFN 803

Query: 656 IFNFSNC 662
           IF F+NC
Sbjct: 804 IFEFTNC 810


>gi|297840111|ref|XP_002887937.1| hypothetical protein ARALYDRAFT_474976 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333778|gb|EFH64196.1| hypothetical protein ARALYDRAFT_474976 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 991

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 216/685 (31%), Positives = 329/685 (48%), Gaps = 123/685 (17%)

Query: 47  FIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVP 106
           F D  + RG  ISP L+  I  S+ISIV+ S+ YASS WCL+EL++IL+ K   GQIV+ 
Sbjct: 2   FDDQGIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMT 61

Query: 107 VFYLVDPSDAGYCPSLGWMGI-----------------------------FDIPTSESVL 137
           VFY VDPSD        W                                F    +ES +
Sbjct: 62  VFYGVDPSDVRKQTGDIWKVFKKTCGGKTEEKRRKWSQALNDAGNIAGEHFLNWDNESKM 121

Query: 138 IEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKT 196
           IE    D+S KL+     D +D +VG+E+ +++I+S L L    E   VGI G  GIGKT
Sbjct: 122 IEKIGRDVSNKLNTTVSKDFED-MVGLETHLEKIQSLLHLDNEDEVIIVGICGPAGIGKT 180

Query: 197 TIASAIYSNISSHFEGSYFMQNIR-------DE-----------SEKV---GGLANIHLN 235
           TIA A++S ++  F  + FM+N+R       DE             K+    G+   HL 
Sbjct: 181 TIARALHSRLTCSFRRTCFMENLRGSYNSSLDEHGLKLQLQEQLLSKILNQNGMRIYHLG 240

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
               RL   KVLI+  ++ DLKQ++ L      F PGSR+++TT + +LLK H    + +
Sbjct: 241 AIHERLCDQKVLIILDEVDDLKQLEALANDTKWFGPGSRIVVTTENQELLKQH---GIKN 297

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            + V   +  ++  +F R AF Q+ P  GF  LS  V K  + +PL L+V+GSYL   +E
Sbjct: 298 TYHVDFPTQKEAREIFCRYAFKQSTPQDGFENLSERVTKLCSRLPLGLRVMGSYLLRKTE 357

Query: 356 EEWESAVNKLK-RMPHMD--IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
           ++WE  + +L+     +D  I++VL+V YDGL ++ Q +FL  A FF   D+  V   L 
Sbjct: 358 DDWEDILYRLESSFDPVDRGIERVLRVGYDGLHEKNQLLFLLIAFFFNYKDEDHVKAMLA 417

Query: 413 ACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
               + ++G+  L  KSL+  S+   I MH LLQ++G E V+++   +P KR  L    +
Sbjct: 418 DNNLNVRLGLKTLEYKSLIQKSSGGNIVMHKLLQQVGREAVQRQ---EPWKRQILIDAHE 474

Query: 472 IYQVLNEN-------------TSLPTGI--------NLDSLK------------------ 492
           I  VL  +             +++P G+        N+ +L+                  
Sbjct: 475 ICDVLETDSGCANVMGISFNVSTIPNGVHISAKAFQNMRNLRFLSIYETRRDINLRVNVP 534

Query: 493 --------------ELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
                         E+Y G C      PE    + +L+L+   +E+L      L+ L  L
Sbjct: 535 ENMNFPHRLRFLHWEVYPGKCLPSTFRPEY---LVELNLQNNKLEKLWEGTQPLTNLNKL 591

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL--NLAEKDFEKI 596
           +L     LK +   L N  +L+RL+L+GC  L ++P  + NL  LE L  NL  +  + +
Sbjct: 592 ELCGSLRLKELPD-LSNATNLKRLDLTGCWSLVEIPSSVENLHKLEELEMNLCLQ-LQVV 649

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLP 621
           P+    L+ L  LR+  C +L+  P
Sbjct: 650 PTHF-NLASLISLRMLGCWQLRKFP 673



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 91/196 (46%), Gaps = 44/196 (22%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +L +L L G   LK  P++S   N++ LDL    ++ E+PSS+ NL +L +L++  C 
Sbjct: 585 LTNLNKLELCGSLRLKELPDLSNATNLKRLDLTGCWSLVEIPSSVENLHKLEELEMNLCL 644

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP--------------------EEIGNLESLE 584
            L+ V +   NL SL  L + GC +L K P                    E I     LE
Sbjct: 645 QLQVVPTHF-NLASLISLRMLGCWQLRKFPGISTNITSLVIGDAMLEEMLESITLWSCLE 703

Query: 585 YLN--------------LAEK---DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
            L+              L EK   D E+IP  +K L  L  L +  C +L SLPELP GS
Sbjct: 704 TLSIYGSVITHNFWAVTLIEKMGTDIERIPYCIKDLPALKSLYIGGCPKLVSLPELP-GS 762

Query: 628 --SIHARHCTSLKTLS 641
              +    C SL+T+S
Sbjct: 763 LRRLTVETCESLETVS 778


>gi|15230522|ref|NP_190724.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|6572077|emb|CAB63020.1| disease resistance-like protein [Arabidopsis thaliana]
 gi|332645285|gb|AEE78806.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1253

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 206/697 (29%), Positives = 325/697 (46%), Gaps = 141/697 (20%)

Query: 17  DVFLSF-RGKD-VRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           DV++SF R +D VR++FVSHL AA  R  I +FI +    G++   +  S +E S+ S+V
Sbjct: 6   DVYISFDRSEDTVRYSFVSHLCAAFRRRGISSFIREN---GSDSESNGFSKLETSRASVV 62

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGW---------- 124
           +FSE Y+SS+ C+ ELVK+ E + K    VVPVFY   P    +     W          
Sbjct: 63  VFSEKYSSSKSCMEELVKVSERRRKNCLAVVPVFY---PVTKSFMKKQIWNLGDVRSDWP 119

Query: 125 ---MGIFDIP-------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQ 174
              +   D+P        S+S  +E  V D+ +KL+    SDN    +G+ S + +IE+ 
Sbjct: 120 SALLETVDLPGHELYDTQSDSDFVEEIVADVREKLN---MSDN----IGIYSKLGKIETL 172

Query: 175 LLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--GLANI 232
           +        ++GIWG+ GIGKTT+A A +  +S  +E S F+++      + G  GL   
Sbjct: 173 IYKQPWGVRSIGIWGMPGIGKTTLAKAAFDQLSGDYEASCFIKDFNKAFHEKGLYGLLEA 232

Query: 233 HLN-----------------FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
           H                     R  L   +VL+V  D+      +  +G  D F PGS +
Sbjct: 233 HFGKILREELGIKSSITRPILLRNVLRHKRVLVVLDDVCKPLDAESFLGGFDWFCPGSLI 292

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           IIT+RD Q+       RV  ++EV  L+  ++L LFSR AFG+        +LS  VI Y
Sbjct: 293 IITSRDKQVFSI---CRVDQIYEVPGLNEEEALQLFSRCAFGKEIIHESLQKLSKKVIDY 349

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
           ANG PLAL   G  +   + +  E A  K+K+    +I   +K +YD L   E+NIFLD 
Sbjct: 350 ANGNPLALIFFGC-MSRKNPKPIEIAFPKVKKYLAHEIHDAVKSTYDSLSSNEKNIFLDI 408

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQE 455
           AC F+G +   V++ L+ C F  ++ I+ LV K LV+++  ++ MH+L+Q +G +I    
Sbjct: 409 ACLFRGENVDCVIHLLEGCGFFPRVEINVLVEKCLVSMAEGRVVMHNLIQSIGRKI---- 464

Query: 456 SIKDPGKRSRLWHP---------------EDIYQVLNENTSLPTGINLDSLKEL----YL 496
            I    +RSRLW P               EDI  +  + ++L   +N  + + +    YL
Sbjct: 465 -INGGKRRSRLWKPLIIKYFLEDRQVLGSEDIEAIFLDPSALSFDVNPMAFENMYNLRYL 523

Query: 497 GGCS-------------------------NLKRFPEISC-------NIEDLDLKETAIEE 524
             CS                         + + FP +S        N+  L++  + ++ 
Sbjct: 524 KICSSNPGNHYALHLPKGVKSLPEELRLLHWEHFPLLSLPQDFNTRNLVILNMCYSKLQR 583

Query: 525 L---PSSIGNLSRLV--------------------DLDLTNCSGLKSVSSRLCNLKSLRR 561
           L      +G L R++                     +DL  C+ L+   +   + + LR 
Sbjct: 584 LWEGTKELGMLKRIMLCHSQQLVGIQELQIALNMEVIDLQGCARLQRFLAT-GHFQHLRV 642

Query: 562 LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           +NLSGC+K++  PE   N+E    L L +     IP+
Sbjct: 643 INLSGCIKIKSFPEVPPNIEE---LYLKQTGIRSIPT 676



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/148 (44%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           +V +++ SL   + LD+LK L L  C  L+    I  N+  L L  TAI+ELPS + +LS
Sbjct: 699 EVSSDSQSLSIMVYLDNLKVLDLSQCLELEDIQGIPKNLRKLYLGGTAIKELPS-LMHLS 757

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
            LV LDL NC  L  +   + NL SL  LNLSGC +LE +    G   +LE L LA    
Sbjct: 758 ELVVLDLENCKRLHKLPMGIGNLSSLAVLNLSGCSELEDIQ---GIPRNLEELYLAGTAI 814

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           +++ S +K LS+L  L LQNCKRLQ LP
Sbjct: 815 QEVTSLIKHLSELVVLDLQNCKRLQHLP 842



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 105/259 (40%), Gaps = 86/259 (33%)

Query: 482  LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEE---------------- 524
            LP GI NL SL  L L GCS L+    I  N+E+L L  TAI+E                
Sbjct: 773  LPMGIGNLSSLAVLNLSGCSELEDIQGIPRNLEELYLAGTAIQEVTSLIKHLSELVVLDL 832

Query: 525  --------LPSSIGNLSRLVDLDLTNCSGL--KSVSS----------------------- 551
                    LP  I NL  LV L LT+ SG+  + VS+                       
Sbjct: 833  QNCKRLQHLPMEISNLKSLVTLKLTDPSGMSIREVSTSIIQNGISEIGISNLNYLLLTFN 892

Query: 552  -------------------------RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL 586
                                     R   L SL   N S    L  +PEEI +L S+  L
Sbjct: 893  ENAEQRREYLPRPRLPSSSLHGLVPRFYALVSLSLFNAS----LMHIPEEICSLPSVVLL 948

Query: 587  NLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNSST 645
            +L    F KIP S+KQLSKL  LRL++C+ L  LP LP    +   H C SL+++S    
Sbjct: 949  DLGRNGFSKIPESIKQLSKLHSLRLRHCRNLILLPALPQSLKLLNVHGCVSLESVSWG-- 1006

Query: 646  LLTRSSKHWDIFNFSNCSN 664
               +   H   + FS+C N
Sbjct: 1007 -FEQFPSH---YTFSDCFN 1021


>gi|37654137|emb|CAD56833.1| putative resistance gene analogue protein [Lens culinaris]
          Length = 810

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 168/400 (42%), Positives = 228/400 (57%), Gaps = 30/400 (7%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           E+ L+E     I KKL    P   KD LVG++S I+EI S L    ++   +GIWG+GGI
Sbjct: 220 EASLVETIAEHIHKKLIPKLPV-CKDNLVGIDSRIEEIYSLLGMRLSDVRFIGIWGMGGI 278

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANI------HLNFERRRLSRM--- 244
           GKTTIA ++Y  I   F+ S F+ +IR+   +  GL  I      HL         +   
Sbjct: 279 GKTTIARSVYDAIKDEFQVSCFLADIRETISRTNGLVRIQTELLSHLTIRSNDFYNIHDG 338

Query: 245 -----------KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
                      KVL+V  D+++L Q++ L G+ + F  G RVIIT+RD  LL  H    V
Sbjct: 339 KKILANSFRNKKVLLVLDDVSELSQLESLAGKQEWFGSGIRVIITSRDKHLLMTHG---V 395

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
              ++ K L  N++L LF   AF QN P   +L L   V++YA G+PLAL+VLGS+  G 
Sbjct: 396 NETYKAKGLVKNEALKLFCLKAFKQNQPKEEYLSLCKEVVEYARGLPLALEVLGSHFHGR 455

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
           + E W SA+ +++ +PH  I   LK+SYD L   E+N+FLD ACFFKG D   VM  L+ 
Sbjct: 456 TVEVWHSALEQMRNVPHSKIHDTLKISYDSLQPMERNMFLDIACFFKGMDIDGVMEILED 515

Query: 414 CRFSAKIGISRLVGKSLVTI--SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           C +  KIGI  L+ +SLV+    + K+ MHDLL+EMG  IV QES  DPGKRSRLW  +D
Sbjct: 516 CGYYPKIGIDILIERSLVSFDRGDRKLWMHDLLEEMGRNIVCQESPNDPGKRSRLWSQKD 575

Query: 472 IYQVLNEN--TSLPTGINLDSLKELYLGGCSNLKRFPEIS 509
           I QVL +N  T    GI L+ L + Y  G  N++ F  +S
Sbjct: 576 IDQVLTKNKGTDKIQGIALN-LVQPYEAGW-NIEAFSRLS 613



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 64/102 (62%), Gaps = 1/102 (0%)

Query: 18  VFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIVIF 76
           VF+SFR +D R  F  HL A+L R  I+TF DD  L RG  IS  L+ AI+ S  +I+I 
Sbjct: 27  VFVSFRSEDTRQGFTDHLFASLERRGIKTFKDDHDLKRGEVISVELNKAIQESMFAIIIL 86

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
           S  YASS WCL+EL KI+E     GQ   P+F+ VDPSD  +
Sbjct: 87  SPNYASSTWCLDELQKIVECSKSSGQTFFPIFHGVDPSDVRH 128


>gi|296089445|emb|CBI39264.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 180/556 (32%), Positives = 282/556 (50%), Gaps = 97/556 (17%)

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           + +VG++  +K+++  + + S + + VGI+G GGIGKTTIA  +Y+++   F+   F++N
Sbjct: 95  ENIVGMDENLKKVKLLIDAQSNKVSMVGIYGTGGIGKTTIAKVVYNDMLDQFKCHSFLEN 154

Query: 219 IRDESEKVGGL-------------------ANIHLNFERRRLSRM--KVLIVFYDLTDLK 257
           +R++ E  G L                    NI   F++ +  R   KVLIV  D+   +
Sbjct: 155 VREKYEDKGDLLQLQKELLCDILMEKNLVLRNIDEGFKKIKSKRHSEKVLIVLDDVGCEE 214

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG 317
           Q+  L    + F PGS +I+TTR+ + L  +        +E K ++   +  LF  NAF 
Sbjct: 215 QLKFLAPNSECFHPGSIIIVTTRNKRCLDVYDSYSS---YEAKRMADKQAEELFCWNAFK 271

Query: 318 QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVL 377
           Q+HP   F+ LSN ++ YA+G+PLAL VLGS+L     +EWES +++LK +P  +IQKVL
Sbjct: 272 QDHPIENFVGLSNRILDYADGLPLALVVLGSFLFQRPMDEWESTLDELKTIPPENIQKVL 331

Query: 378 KVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK 437
           ++SYDGL DE + +FL  ACFFK  D+ +    L++C+    IG+  L  + L++I +N 
Sbjct: 332 QISYDGLSDERKKLFLYIACFFKDEDEKMATRILESCKLHPAIGLRVLHERCLISIEDNT 391

Query: 438 ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN------------TSLPTG 485
           I MHDLLQEMG  IV  +  + PGK SRL   +DI  VL++N             S  TG
Sbjct: 392 IRMHDLLQEMGWAIVCNDP-ERPGKWSRLCELQDIESVLSQNEWTKNIEGIFTSQSRHTG 450

Query: 486 INLDSLKELY--LGGCSNLK-RFPEISCNIEDLDLK----------ETAIEELPSSI--- 529
            ++    E++  +     LK  F +I    +D +L              +E LPS+    
Sbjct: 451 KHIQLTTEVFRNMNQLRLLKVEFNQIVQLSQDFELPCHDLVYFHWDYYPLEYLPSNFHTD 510

Query: 530 -----------------GNL--SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
                            GN+   +L  +DL+    L  +SS + ++ +L  L L GC +L
Sbjct: 511 NLVELNLWCSRIKHLWEGNMPAKKLKVIDLSYSMHLVDISS-ISSMPNLETLTLKGCTRL 569

Query: 571 EKLPEEIGNLE------------------------SLEYLNLAEKDFEKIPSSMKQLSKL 606
           + LP     LE                        SL  LNL++     +PSS+ +L+ L
Sbjct: 570 KSLPRNFPKLECLQTLSCCGCSNLESFPKIEEEMRSLRKLNLSQTGIMGLPSSISKLNGL 629

Query: 607 SDLRLQNCKRLQSLPE 622
            +L L +CK+L SLP+
Sbjct: 630 KELDLSSCKKLSSLPD 645



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 11/174 (6%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLV 536
           SLP     L+ L+ L   GCSNL+ FP+I     ++  L+L +T I  LPSSI  L+ L 
Sbjct: 571 SLPRNFPKLECLQTLSCCGCSNLESFPKIEEEMRSLRKLNLSQTGIMGLPSSISKLNGLK 630

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-EIGNLESLEYLNLAE-KDFE 594
           +LDL++C  L S+   + +L SL+ LNL  C +L   P   IG+L++L+YL+L+  ++ E
Sbjct: 631 ELDLSSCKKLSSLPDSIYSLSSLQTLNLFACSRLVGFPGINIGSLKALKYLDLSWCENLE 690

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS-----SIHARHCTSLKTLSNS 643
            +P+S+  LS L  L L  C +L+  P++  GS     S+    C +L++L  S
Sbjct: 691 SLPNSIGSLSSLQTLLLIGCSKLKGFPDINFGSLKALESLDFSGCRNLESLPVS 744



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 2/117 (1%)

Query: 520 TAIEELPSSIGNLSRLVDLDLTNCSGLKS-VSSRLCNLKSLRRLNLSGC-LKLEKLPEEI 577
           T +E +   I +LS LV L LT C   +  +   + NL  L++L+L  C L    + + I
Sbjct: 851 TVVEGILYDIFHLSSLVKLSLTKCKPTEEGIPRDIQNLSPLQQLSLHDCNLMKGTILDHI 910

Query: 578 GNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHC 634
            +L SLE L L    F  IP+ + +LS L  L L +CK+LQ +PELP        HC
Sbjct: 911 CHLTSLEELYLGWNHFSSIPAGISRLSNLKALDLSHCKKLQQIPELPSSLRFLDAHC 967



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 7/117 (5%)

Query: 480 TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETA-IEELPSSIGNLS 533
           +SLP  I +L SL+ L L  CS L  FP I+      ++ LDL     +E LP+SIG+LS
Sbjct: 641 SSLPDSIYSLSSLQTLNLFACSRLVGFPGINIGSLKALKYLDLSWCENLESLPNSIGSLS 700

Query: 534 RLVDLDLTNCSGLKSVSS-RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
            L  L L  CS LK        +LK+L  L+ SGC  LE LP  I N+ SL+ L + 
Sbjct: 701 SLQTLLLIGCSKLKGFPDINFGSLKALESLDFSGCRNLESLPVSIYNVSSLKTLGIT 757


>gi|224145367|ref|XP_002325616.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222862491|gb|EEE99997.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 889

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 185/514 (35%), Positives = 267/514 (51%), Gaps = 62/514 (12%)

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           L G++  + E+ES L   S +   VGIWG+GGIGKTTIA  + S + S FEG +F  N R
Sbjct: 10  LFGIDVRVSEVESLLDMESPDVLIVGIWGMGGIGKTTIAQVVCSKVRSRFEGIFF-ANFR 68

Query: 221 DESE----------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQI----D 260
            +S+                 +G L+     F R RL R+KV IV  D+ DL ++    D
Sbjct: 69  QQSDLLRRFLKRLLGQETLNTIGSLS-FRDTFVRNRLRRIKVFIVLDDVDDLMRLEEWRD 127

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
           LL GR   F PGS+V+IT+RD Q+LKN     V   +EV+ L+  D++ LFS  A     
Sbjct: 128 LLDGRNSSFGPGSKVLITSRDKQVLKN----VVDETYEVEGLNDEDAIQLFSSKALKNYI 183

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVS 380
           P      L + + ++  G PLAL+VLGS L G S EEW SA+ KL + P   I++ L++S
Sbjct: 184 PTIDHRHLISQIARHVQGNPLALKVLGSSLYGKSIEEWRSALYKLTQDPQ--IERALRIS 241

Query: 381 YDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVTISNNKIT 439
           YDGLD E+++IFLD A FF G +       LD     S  I IS L+ K L+T S+N + 
Sbjct: 242 YDGLDSEQKSIFLDIAHFFIGWEPDEATRILDGLYGRSVIIDISTLIDKCLITTSHNSLE 301

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN-------------TSLPTGI 486
            HDLL++M   IVR ES   PG+RSRL H  D+ QVL EN             +  P  I
Sbjct: 302 THDLLRQMAINIVRAES-DFPGERSRLCHRPDVVQVLEENKGTQKIKGISLEMSVFPRHI 360

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS------------- 533
            L S     + G   L  +       + + L  T +E +P+ +  L              
Sbjct: 361 LLKSDAFAMMDGLRFLNIYISRHSQEDKMHLPPTGLEYIPNELRYLRWYGFPSKSLPPSF 420

Query: 534 ---RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
               LV+L L   S L  + + + ++ +LR+++LS    L +LP ++   ++LE L L +
Sbjct: 421 RAVHLVELHLRK-SKLVKLWTGVKDVGNLRKIDLSYSPYLTELP-DLSMAKNLECLRLKD 478

Query: 591 -KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
                ++PSS++ L KL ++ L +C  L+S P L
Sbjct: 479 CPSLTEVPSSLQYLDKLEEIDLSDCNNLRSFPML 512



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 44/207 (21%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPE----------------------ISCNIEDLD 516
           T +P+ +  LD L+E+ L  C+NL+ FP                       IS N+  L 
Sbjct: 483 TEVPSSLQYLDKLEEIDLSDCNNLRSFPMLDSKVLSFLSISRCLYVTTCPMISQNLVWLR 542

Query: 517 LKETAIEELPSSI-GNLS---------------RLVDLDLTNCSG--LKSVSSRLCNLKS 558
           L++T+I+E+P S+ GNL                 L D++  N  G  +K V S +  L  
Sbjct: 543 LEQTSIKEVPQSVTGNLQLLNLDGCSKMTKFPENLEDIEELNLRGTAIKEVPSSIQFLTR 602

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP-SSMKQLSKLSDLRLQNCKRL 617
           LR LN+SGC KLE  PE   +++SLE+L L++   ++IP  S K +  L  L L     +
Sbjct: 603 LRHLNMSGCSKLESFPEITVHMKSLEHLILSKTGIKEIPLISFKHMISLISLDLDGTP-I 661

Query: 618 QSLPELPCG-SSIHARHCTSLKTLSNS 643
           ++LPELP     ++   C SL+T++++
Sbjct: 662 KALPELPPSLRYLNTHDCASLETVTST 688


>gi|224131106|ref|XP_002328455.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222838170|gb|EEE76535.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1150

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 182/515 (35%), Positives = 259/515 (50%), Gaps = 102/515 (19%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           M SSSS     P+ KH+VFLSFRG D              R    + + D L R N I  
Sbjct: 1   MPSSSSPAT--PYLKHEVFLSFRGTDT-------------RNSFTSHLYDALKR-NHIDA 44

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP 120
            + + ++G                                G+ + P              
Sbjct: 45  YIDNKLDG--------------------------------GEKIEPAL------------ 60

Query: 121 SLGWMGIFDIPTSESVLIEGNVNDISKKLS-DLFPSDNKDQLVGVESIIKEIESQLLSGS 179
                 +  I   E  LIE  V+DI KKL  +  PS + ++LVG++S +K+I+S L  GS
Sbjct: 61  ------LERIEEDEIKLIEEIVSDIQKKLHHEPSPSIDAERLVGMKSRVKDIDSLLSFGS 114

Query: 180 TEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFE-- 237
           T    VGIWG+GGIGK+T A A+Y    S FEG  F QN+R+ES+K G     H+  E  
Sbjct: 115 TGVLIVGIWGMGGIGKSTTAEAVYHRNCSKFEGHCFFQNVREESQKHG---IDHVRQEIL 171

Query: 238 --------------------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVII 277
                               +R L R KVLIV  D+ D + +  L+G    F  GSR+++
Sbjct: 172 GEVLEKKDMTIRTKVLPPAIKRMLQRKKVLIVLDDVNDPQVLKYLLGEDGLFGQGSRIMV 231

Query: 278 TTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYAN 337
           T+RD Q+L N        ++EV+ L  +D+L LFS +AF QN+P  G++ LS  V+    
Sbjct: 232 TSRDRQVLINE--CDEDKIYEVEILEEDDALRLFSLHAFKQNNPIEGYIGLSKTVVSCVK 289

Query: 338 GVPLALQVLGSYL-KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTA 396
           GVPL L+VLG+ L +  S E WES V +L+     +++K L++ Y  L D E+ IFLD A
Sbjct: 290 GVPLVLEVLGASLYRKTSVEYWESKVAQLRTNGCEEVKKCLEMCYHELRDTEKKIFLDIA 349

Query: 397 CFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQES 456
           CFF    +  +   LD      + GI RL+   L+ I  NKI MHD+L ++G +IV QE+
Sbjct: 350 CFFGRCKRDHLQQTLD---LEERSGIDRLIDMCLIKIVQNKIWMHDVLVKLGKKIVHQEN 406

Query: 457 IKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSL 491
           + DP +RSRLW  +DIY+VL   T+  TG  ++S+
Sbjct: 407 V-DPRERSRLWQADDIYRVL---TTQRTGSKVESI 437



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
           TSLP  I  L SL+ LY  GCS L                      LP +IG+L  L  L
Sbjct: 791 TSLPDSIGALKSLENLYFSGCSGLA--------------------SLPDNIGSLKSLKSL 830

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIP 597
            L  CSGL S+  R+  LKSL +L L+GCL L  LP+ IG L+SL++L L        +P
Sbjct: 831 TLHGCSGLASLQDRIGELKSLEKLELNGCLGLASLPDNIGTLKSLKWLKLDGCSGLASLP 890

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSN 642
             + +L  L  L L  C  L SL     EL     ++   C+ L +L +
Sbjct: 891 DRIGELKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASLPD 939



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 98/197 (49%), Gaps = 19/197 (9%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
            SLP  I+ L SL EL L  CS L   P   C ++ L   +  +  LP SIG L  L +L
Sbjct: 622 ASLPDNIDELKSLVELDLYSCSKLASLPNSICKLKCL--TKLNLASLPDSIGELRSLEEL 679

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLN------LAEKD 592
           DL++CS L S+ + +  LKSL+ L+L+GC  L  LP+ IG L+SL++ +      LA  D
Sbjct: 680 DLSSCSKLASLPNSIGELKSLQWLDLNGCSGLASLPDNIGELKSLQWFDLNGCFGLASFD 739

Query: 593 ------FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTL 646
                    +PSS+  L  L  L L+   +  S+ EL    S+    C  L +L +S   
Sbjct: 740 LNGCSGLASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCLGLTSLPDSIGA 799

Query: 647 LTRSSKHWDIFNFSNCS 663
           L    K  +   FS CS
Sbjct: 800 L----KSLENLYFSGCS 812



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 23/206 (11%)

Query: 467 WHPEDIYQVLNENTSLPTGINLD-----SLKELYLGGCSNLKRFPEISCNIEDLDLKE-T 520
           + P +I +++N  +S P+ I+ D      L+ L+ G  S++K     S  +  L+L    
Sbjct: 540 YQPLEILKLMNPPSSKPSLIDSDLFKVPHLEVLHPGIPSSIK----YSTRLTTLELPRLE 595

Query: 521 AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
           +   LPSSIG LS+LV L+L++C  L S+   +  LKSL  L+L  C KL  LP  I  L
Sbjct: 596 SFYTLPSSIGCLSQLVRLNLSSCESLASLPDNIDELKSLVELDLYSCSKLASLPNSICKL 655

Query: 581 ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTS 636
           + L  LNLA      +P S+ +L  L +L L +C +L SLP    EL     +    C+ 
Sbjct: 656 KCLTKLNLAS-----LPDSIGELRSLEELDLSSCSKLASLPNSIGELKSLQWLDLNGCSG 710

Query: 637 LKTLSNSSTLLTRSSKHWDIFNFSNC 662
           L +L ++   L   S  W  F+ + C
Sbjct: 711 LASLPDNIGEL--KSLQW--FDLNGC 732



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 81/169 (47%), Gaps = 6/169 (3%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
            SLP+ I  L SLK L+L   S      E+      +      +  LP SIG L  L +L
Sbjct: 747 ASLPSSIGALKSLKSLFLRVASQQDSIDELESLKSLIPSGCLGLTSLPDSIGALKSLENL 806

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AEKDFEKIP 597
             + CSGL S+   + +LKSL+ L L GC  L  L + IG L+SLE L L        +P
Sbjct: 807 YFSGCSGLASLPDNIGSLKSLKSLTLHGCSGLASLQDRIGELKSLEKLELNGCLGLASLP 866

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSN 642
            ++  L  L  L+L  C  L SLP    EL     ++   C+ L +L++
Sbjct: 867 DNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTD 915



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 11/114 (9%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL-DLKE------TAIEELPSSIGN 531
             SLP  I  L SLK+LYL GCS L    +   NI +L  LK+      + +  LP  IG 
Sbjct: 1010 ASLPDRIGELKSLKQLYLNGCSELASLTD---NIGELKSLKQLYLNGCSGLASLPDRIGE 1066

Query: 532  LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEY 585
            L  L  L+L  CSGL S+   +  LK L++L+  GC  L  LP  IG LESL++
Sbjct: 1067 LKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSGLASLPNNIGELESLQF 1120



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 13/176 (7%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL-DLKETAIEELPS---SIGNLSR 534
             SLP  I  L SLK L L GCS L   P+    ++ L  L      EL S   +IG L  
Sbjct: 863  ASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTDNIGELKS 922

Query: 535  LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL----AE 590
            L  L L  CSGL S+  R+  LKSL  L L+GC  L  LP+ I  L+ L+ L+       
Sbjct: 923  LKQLYLNGCSGLASLPDRIGELKSLELLELNGCSGLASLPDTIDALKCLKKLDFFGCSGL 982

Query: 591  KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSN 642
                 +P ++  L  L  L+L  C  L SLP    EL     ++   C+ L +L++
Sbjct: 983  AKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGELKSLKQLYLNGCSELASLTD 1038



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 74/151 (49%), Gaps = 9/151 (5%)

Query: 480  TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL-DLKE------TAIEELPSSIGN 531
             SLP  I+ L  LK+L   GCS L +   +  NI  L  LK       + +  LP  IG 
Sbjct: 959  ASLPDTIDALKCLKKLDFFGCSGLAKLASLPDNIGTLKSLKWLKLDGCSGLASLPDRIGE 1018

Query: 532  LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AE 590
            L  L  L L  CS L S++  +  LKSL++L L+GC  L  LP+ IG L+SLE L L   
Sbjct: 1019 LKSLKQLYLNGCSELASLTDNIGELKSLKQLYLNGCSGLASLPDRIGELKSLELLELNGC 1078

Query: 591  KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                 +P ++  L  L  L    C  L SLP
Sbjct: 1079 SGLASLPDTIDALKCLKKLDFFGCSGLASLP 1109



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 68/165 (41%), Gaps = 31/165 (18%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDL 538
            SLP  I  L SL+   L GC  L  F    C         + +  LPSSIG L  L  L
Sbjct: 712 ASLPDNIGELKSLQWFDLNGCFGLASFDLNGC---------SGLASLPSSIGALKSLKSL 762

Query: 539 DL--------------------TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            L                    + C GL S+   +  LKSL  L  SGC  L  LP+ IG
Sbjct: 763 FLRVASQQDSIDELESLKSLIPSGCLGLTSLPDSIGALKSLENLYFSGCSGLASLPDNIG 822

Query: 579 NLESLEYLNL-AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +L+SL+ L L        +   + +L  L  L L  C  L SLP+
Sbjct: 823 SLKSLKSLTLHGCSGLASLQDRIGELKSLEKLELNGCLGLASLPD 867


>gi|334186704|ref|NP_193687.3| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658794|gb|AEE84194.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1744

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 208/689 (30%), Positives = 337/689 (48%), Gaps = 106/689 (15%)

Query: 17  DVFLSF-RGKD-VRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +V++SF R +D +RH+FVSHL+A   R+ +  F  +     +  +    +AI  +++S+V
Sbjct: 6   EVYISFNRWEDTIRHSFVSHLSAEFQRKGVSVFASEDSASDDRFAEESDAAIAKARVSVV 65

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFY-LVDPSDAGYCPSLGWM-------- 125
           IFSE +ASS+ CLNE +K+ + +   G +VVPVFY L +     +C  L  M        
Sbjct: 66  IFSENFASSKGCLNEFLKVSKCRRSKGLVVVPVFYGLTNSIVKKHCLELKKMYPDDKVDE 125

Query: 126 ---GIFDIP-----------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEI 171
               ++DI             S+S L+E  V D+ +KL       ++   +GV S + +I
Sbjct: 126 WRNALWDIADLRGGHVSSHKRSDSELVEKIVADVRQKL-------DRRGRIGVYSRLTKI 178

Query: 172 ESQLL-SGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--G 228
           E  L         ++GIWG+ GIGKTT+A A Y  +S  FE S F+++   E ++ G  G
Sbjct: 179 EYLLCKQPGCIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIEDFDREFQEKGFFG 238

Query: 229 L--ANIHLNFERRRLSRM-------KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITT 279
           L    + +N +  RLS +       ++L+V  D+         +   D   PGS +I+T+
Sbjct: 239 LLEKQLGVNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGPGSLIIVTS 298

Query: 280 RDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGV 339
           +D Q+L      +V  +++V+ L+ ++SL LFSR AFG++ P    LELS   + YANG 
Sbjct: 299 QDKQVLVQ---CQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGN 355

Query: 340 PLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF 399
           PLAL + G  LKG +  + +S V +LKR     I   LK SYD L   E+ IFLD    F
Sbjct: 356 PLALSICGKNLKGKTPLDMKSVVLELKRHLSDKIFVKLKSSYDALSVSEKEIFLDIVFTF 415

Query: 400 KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQES--- 456
           +G +   VM  L  C F  ++GI  LV KS VT+S N++ +++L+ ++G +I+  +S   
Sbjct: 416 RGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTVSENRVQVNNLIYDVGLKIINDQSDEI 475

Query: 457 ------IKDPGKRSRLWHP---------EDIYQVLNENTSLP------------------ 483
                 +     +S + H          ED+  +  + ++LP                  
Sbjct: 476 GMCYRFVDASNSQSLIEHKEIRESEQGYEDVKAINLDTSNLPFKGHIAFQHMYNLRYLTI 535

Query: 484 -TGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTN 542
            + IN     +L+L G       PE+      L      +   P + G    LV+L++  
Sbjct: 536 YSSINPTKDPDLFLPGDPQFLP-PELRL----LHWTCYPLHSFPQNFG-FQYLVELNMP- 588

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK-------DFEK 595
           CS LK +     NL+ L+R+ LS  ++L        N++ L+Y    EK       + + 
Sbjct: 589 CSKLKKLWGGTKNLEVLKRITLSCSVQLL-------NVDELQYSPNIEKIDLKGCLELQS 641

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
            P +  QL  L  + L  CK+++S P++P
Sbjct: 642 FPDT-GQLQHLRIVDLSTCKKIKSFPKVP 669



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 112/230 (48%), Gaps = 55/230 (23%)

Query: 482  LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIG---------- 530
            LPTG++ L+ L  L L GCS L+   ++  N+ +L L  TAI ELP SIG          
Sbjct: 864  LPTGMSKLEFLVMLKLSGCSKLEIIVDLPLNLIELYLAGTAIRELPPSIGDLALLDTLDL 923

Query: 531  --------------NLSRLVDLDLTNCSGLKSVSSRLCNLKSLR--------RLNLSGCL 568
                          NL+ L  LDL+NCS L+  +S L  ++ LR        R  L  C 
Sbjct: 924  KNCNRLRHLPMEMHNLNPLKVLDLSNCSELEVFTSSLPKVRELRPAPTVMLLRSKLPFCF 983

Query: 569  ---------------KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQN 613
                           +L+ +PEEI  + SL+ L+L+   F ++P S+K  SKL  LRL+ 
Sbjct: 984  FIFYEHRVTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLLSLRLRY 1043

Query: 614  CKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
            C+ L+SLP+LP     ++A  C+SL+ ++     L R       + FSNC
Sbjct: 1044 CENLRSLPQLPRSLQLLNAHGCSSLQLITPDFKQLPR------YYTFSNC 1087



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 86/143 (60%), Gaps = 5/143 (3%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLD 539
           SLP  +  +SL+ L   GCS L+       N++ L L +TAI+E+PSS+  ++S+LV LD
Sbjct: 726 SLPDIVIFESLEVLDFSGCSELEDIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLVKLD 785

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           + NC  L+ +   + N+K L  L LSGC  LE + E   NL+ L     A K+F   PS+
Sbjct: 786 MENCERLRDLPMGMSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEF---PST 842

Query: 600 -MKQLSKLSDLRLQNCKRLQSLP 621
            ++ LS++  L L+NCK+LQ LP
Sbjct: 843 LLETLSEVVLLDLENCKKLQGLP 865



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 65/101 (64%), Gaps = 6/101 (5%)

Query: 16   HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSL-SSAIEGSKISIV 74
            +DVF+SF GKD R  F+S     L  + I   I DK+     +S SL +  I+ S I++V
Sbjct: 1401 NDVFVSFHGKDFRKQFISDFLKKLVYKGIRICIGDKI-----LSRSLINKVIKESSIAVV 1455

Query: 75   IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD 115
            +FSE YASS  CL +L++I++   + GQ+V+P+FY V+PSD
Sbjct: 1456 VFSENYASSSLCLLQLMEIMKCWEELGQVVMPIFYKVNPSD 1496



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 5/142 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI-GNLSRLVDLD 539
           LP G+ N+  L  L L GCSNL+   E+  N+++L L  TA++E PS++   LS +V LD
Sbjct: 795 LPMGMSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPSTLLETLSEVVLLD 854

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L NC  L+ + + +  L+ L  L LSGC KLE + +   NL     L LA     ++P S
Sbjct: 855 LENCKKLQGLPTGMSKLEFLVMLKLSGCSKLEIIVDLPLNLIE---LYLAGTAIRELPPS 911

Query: 600 MKQLSKLSDLRLQNCKRLQSLP 621
           +  L+ L  L L+NC RL+ LP
Sbjct: 912 IGDLALLDTLDLKNCNRLRHLP 933



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 23/163 (14%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS---------- 527
           E  S P    L  L+ + L  C  +K FP++  +I  L L+ T I +L S          
Sbjct: 638 ELQSFPDTGQLQHLRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRL 697

Query: 528 --SIGNLS------RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
              + N+S      R   L L + S L S+   +   +SL  L+ SGC +LE +    G 
Sbjct: 698 TRKLENVSSSNQDHRKQVLKLKDSSHLGSLPD-IVIFESLEVLDFSGCSELEDIQ---GF 753

Query: 580 LESLEYLNLAEKDFEKIPSSM-KQLSKLSDLRLQNCKRLQSLP 621
            ++L+ L LA+   +++PSS+   +SKL  L ++NC+RL+ LP
Sbjct: 754 PQNLKRLYLAKTAIKEVPSSLCHHISKLVKLDMENCERLRDLP 796



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)

Query: 374  QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
            +K L+V+Y GL   E+ +FL  AC   G    L+  FL +  F  +  +  L G+ L+ I
Sbjct: 1299 KKRLRVNYAGLKQREKALFLYIACLLGGEKADLLAQFLASTDFVIESTLEDLAGRYLIDI 1358

Query: 434  SNN-KITMHDLLQEMGGEIV 452
            S+N ++ M  L +    EI+
Sbjct: 1359 SSNGEVMMPPLQRNFSREII 1378


>gi|297791267|ref|XP_002863518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309353|gb|EFH39777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1150

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 222/787 (28%), Positives = 343/787 (43%), Gaps = 169/787 (21%)

Query: 14  PKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISI 73
           P H VFL+FRG DVR+NF+SHL  AL    I  F+D+   RG +++  L   IEGS ++I
Sbjct: 12  PCHKVFLNFRGADVRYNFISHLEKALKDAGINVFVDEDEKRGKDLT-VLFHRIEGSNMAI 70

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD------------------ 115
           V+FSE Y  S WCLNEL KI E  ++   + +P+F+ V   +                  
Sbjct: 71  VVFSERYMESEWCLNELAKIKERVDEGKLVAIPIFFKVGADELKELLDVACETHGNVPGT 130

Query: 116 -----AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQ-----LVGVE 165
                A  C +L         + E+  ++  V  + + LSD+ PS   ++     L G+E
Sbjct: 131 QKWKVALECTTLKMGLTLGKKSDEANFVKMVVKKVMQSLSDV-PSLEGEKPEMAPLFGIE 189

Query: 166 SIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESE 224
             +K+++ +L      E   VGI G+ GIGKT++A+ +++     F      QNIR++  
Sbjct: 190 HRVKQVKEKLDFDRCDETRIVGIVGMPGIGKTSLATELFNKYKYKFCRCVNFQNIREKWA 249

Query: 225 KVGG-------------LANI------HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGR 265
           + G              + NI      H   E + L   KV +V  D++  + + +L+G 
Sbjct: 250 RSGAERVRKMFLEELLEITNISDDEATHGCLESKLLLN-KVFVVLDDVSSARHLQVLLGN 308

Query: 266 LDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ---NHPA 322
            +    GSR++I TRD  L+         + + V  L+  D L  FS  AF     +   
Sbjct: 309 RNWIKEGSRIVIITRDRTLITELDP----NPYVVPRLNLVDGLMYFSFYAFEARICDPEM 364

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             ++++S   + YA G PLALQ+LG  L+G  E +W++ ++   + P+  IQ + K+SYD
Sbjct: 365 ESYMQMSREFVDYARGNPLALQMLGMDLRGKGEAQWKAWLDTSAKCPNKIIQNLFKISYD 424

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC---RFSAKIGISRLVGKSLVTISNNKIT 439
            L ++E++ FLD ACFF+  D+Y   + LD+     F A   I+ LV K  ++IS   + 
Sbjct: 425 ELSEQEKDAFLDIACFFRSEDEYYARSLLDSGDHESFQAAREITHLVHKFFISISGGCVE 484

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINLD-------S 490
           MHDLL     EI    S      +SRL +   I   L       T  GI+LD        
Sbjct: 485 MHDLLHTFAMEICSLASCGVNQVKSRLRNGNYIIAALQGKMETKTVRGISLDMSELTNMP 544

Query: 491 LKELYLGGCSNLK--RFPEISCNIE-------------DLDLKET--------AIEELPS 527
           L+        NL+  +    +C +E                LKE          ++ELPS
Sbjct: 545 LERSAFTNMCNLRYLKLYSSTCPLECEGDCKLNFPDGLSFPLKEVRYLEWLKFPLDELPS 604

Query: 528 SIGNLSRLVDL-----------------------DLTNCSGLKSVSSRLCNLKSLRRLNL 564
                  L+DL                       DL N   L+ +S       +L RLNL
Sbjct: 605 DF-TPKNLIDLKLPYSKIKQVWKESKGTPKLKWVDLNNSRMLQKISG-FSKAPNLLRLNL 662

Query: 565 SGCLKLEKLPEEIGNLESLEYLNLAE--------------------------KDFEKI-- 596
            GC  L+ L EE+  ++SL +LNL                            ++F  I  
Sbjct: 663 EGCTSLDCLSEEMKTMQSLVFLNLRGCTSLRCLPEMNLSSLTTLILTGCLKLREFRLISE 722

Query: 597 ---------------PSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH------CT 635
                          P+ M +L +L  L L+ C+RL+ +PE  C   + A        C+
Sbjct: 723 NIESLYLDGTAIKDLPTDMVKLQRLILLNLKECRRLEIIPE--CIGKLKALQELILSGCS 780

Query: 636 SLKTLSN 642
           +LK+  N
Sbjct: 781 NLKSFPN 787



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 28/205 (13%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +NL SL  L L GC  L+ F  IS NIE L L  TAI++LP+ +  L RL+ L+L  C  
Sbjct: 698 MNLSSLTTLILTGCLKLREFRLISENIESLYLDGTAIKDLPTDMVKLQRLILLNLKECRR 757

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP-------- 597
           L+ +   +  LK+L+ L LSGC  L+  P     +E+   L L     +++P        
Sbjct: 758 LEIIPECIGKLKALQELILSGCSNLKSFPNLEDTMENFRVLLLDGTSIDEMPKIMSGSNS 817

Query: 598 -------------------SSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSL 637
                              S + QL  L  L L+ CK+L+SL  LP     + A  C SL
Sbjct: 818 LSFLRRLSFRRNDVISSLGSDISQLYHLKWLDLKYCKKLKSLSTLPPNIQCLDAHGCISL 877

Query: 638 KTLSNSSTLLTRSSKHWDIFNFSNC 662
           +T+++    L  +     +F F+NC
Sbjct: 878 QTVTSPLAFLMPTEDTHSMFIFTNC 902


>gi|357499321|ref|XP_003619949.1| TIR-NBS-LRR disease resistance-like protein [Medicago truncatula]
 gi|355494964|gb|AES76167.1| TIR-NBS-LRR disease resistance-like protein [Medicago truncatula]
          Length = 1065

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 179/516 (34%), Positives = 279/516 (54%), Gaps = 55/516 (10%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGG 192
           E   IE  V  IS K++ + P       VG++S +++++S L +GS +  + VG++GIGG
Sbjct: 196 EYDFIEKIVKYISNKINRV-PLHVAKYPVGLQSQLQQVKSLLDNGSDDGVHMVGMYGIGG 254

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESE-------------KVGGL------ANIH 233
           +GK+T+A AIY+ ++  FEG  F+ ++R+ S              K  GL       +  
Sbjct: 255 LGKSTLARAIYNFVADQFEGLCFLHDVRENSAQNNLKHLQEKLLFKTTGLEIKLDHVSEG 314

Query: 234 LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
           ++  + RL R K+L++  D+  ++Q+D L G LD F  GSRVIITTR+  LL  H G + 
Sbjct: 315 ISIIKERLCRKKILLILDDVDSIRQLDALAGGLDWFGRGSRVIITTRNKHLLSTH-GIKS 373

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
            H   V+ L   D   L    AF  +   +G+ ++ N  + YA+G+PL L+++GS L G 
Sbjct: 374 THA--VEGLYGTDGHELLRWMAFKSDKVPSGYEDILNRAVAYASGLPLVLEIVGSNLFGK 431

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
           S EEW+  ++   R+P+ +IQK+LKVSYD L++EEQ++FLD AC  KG       + L A
Sbjct: 432 SIEEWKYTLDGYDRIPNKEIQKILKVSYDALEEEEQSVFLDIACCSKGCGWREFEDMLRA 491

Query: 414 ----CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
               C  +  +G+  LV K L+  S   +T+HDL+++MG  IVRQES K+PG+RSRLW  
Sbjct: 492 HYGHC-ITHHLGV--LVDKCLIYQSYGDMTLHDLIEDMGKAIVRQESPKEPGERSRLWCQ 548

Query: 470 EDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI 529
           +DI+ VL EN+          ++ +Y+        FP +   I   D K  A  ++    
Sbjct: 549 DDIFHVLKENSG------TSKIEMIYMN-------FPSMESVI---DQKGKAFRKMT--- 589

Query: 530 GNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLN 587
             L  L+  D     GLK + S L   ++++ L L  C  L  +P+  G  NL+ L + N
Sbjct: 590 -KLKTLIIEDGRFSKGLKYLPSSLRKFQNMKVLTLDECEHLTHIPDISGLSNLQKLTF-N 647

Query: 588 LAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
              K+   I  S+  L+KL  +    CK+L++ P L
Sbjct: 648 FC-KNLITIDDSIGHLNKLELVSASCCKKLENFPPL 682



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 70/101 (69%), Gaps = 1/101 (0%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+ VFLSFRG D R+ F  +L  AL  + I TFIDD+ L RG+EI PSL +AIE S+I I
Sbjct: 17  KYQVFLSFRGSDTRYGFTGNLYKALTDKGIHTFIDDRELQRGDEIKPSLDNAIEESRIFI 76

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
            +FS  YA S +CL+ELV I+      G++V+PVFY VDP+
Sbjct: 77  PVFSPNYAYSSFCLDELVHIIHCYKTKGRLVLPVFYGVDPT 117



 Score = 39.7 bits (91), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 10/133 (7%)

Query: 493 ELYLGGC-SNLKRFPE----ISCNIEDLDLKETAI--EELPSSIGNLSRLVDLDLTNCSG 545
           EL L  C S + RFP+    +  N+ +L L+E  +  E LP  +     +  LDL+   G
Sbjct: 691 ELSLHPCVSGMLRFPKHNDKMYSNVTELCLRECNLSDEYLPIILKWFVNVKHLDLSENVG 750

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEK---LPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           +K +   L     LR LNL GC  LE+   +P  +  L + E L+L+      + S    
Sbjct: 751 IKILPECLNECHLLRILNLDGCESLEEIRGIPPNLNYLSATECLSLSSSTRRMLLSQKVH 810

Query: 603 LSKLSDLRLQNCK 615
            +  +++R  N K
Sbjct: 811 EAGCTNIRFHNAK 823


>gi|9965107|gb|AAG09953.1|AF175398_1 resistance protein MG63 [Glycine max]
          Length = 459

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/342 (42%), Positives = 208/342 (60%), Gaps = 25/342 (7%)

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEG 212
           P    D  VG+ES I+E++  L  GS +  + VGI G+GGIGKTT+A+AIY++I+ HFE 
Sbjct: 8   PLHVADYPVGLESRIQEVKMLLDVGSDDVVHMVGIHGLGGIGKTTLAAAIYNSIADHFEA 67

Query: 213 SYFMQNIRDESEKVGGLANIHLNFE-------------------RRRLSRMKVLIVFYDL 253
             F++N+R E+ K  GL  +  N                     + RL + KVL++  D+
Sbjct: 68  LCFLENVR-ETSKTHGLQYLQRNLLSETVGEDELIGVKQGISIIQHRLQQKKVLLILDDV 126

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
              +Q+  L+GR D F PGSRVIITTRD QLL  H   R    +EV EL+   +L L S 
Sbjct: 127 DKREQLQALVGRPDLFCPGSRVIITTRDKQLLACHGVKRT---YEVNELNEEYALQLLSW 183

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF        + ++ N  + Y+ G+PLAL+V+GS L G + E+W S +++ KR+P+ +I
Sbjct: 184 KAFKLEKVNPCYKDVLNRTVTYSAGLPLALEVIGSNLSGRNIEQWRSTLDRYKRIPNKEI 243

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR-FSAKIGISRLVGKSLVT 432
           Q++LKVSYD L+++EQ++FLD +C  K  D   V + L A      +  I  L+ KSL+ 
Sbjct: 244 QEILKVSYDALEEDEQSVFLDISCCLKEYDLKEVQDILRAHYGHCMEHHIRVLLEKSLIK 303

Query: 433 ISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
           IS+  IT+HDL+++MG EIVR+ES ++PGKRSRLW   DI Q
Sbjct: 304 ISDGYITLHDLIEDMGKEIVRKESPREPGKRSRLWLHTDIIQ 345


>gi|297791299|ref|XP_002863534.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309369|gb|EFH39793.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1360

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 199/675 (29%), Positives = 327/675 (48%), Gaps = 72/675 (10%)

Query: 26  DVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRW 85
           +VR++FVSHL+ AL R+ I + I D ++  + +S    + IE S++S+++ S     +R 
Sbjct: 15  EVRYSFVSHLSEALRRKGISSVIID-VDSDDLLSKESQAKIEISRVSVMVLSRICEPTRV 73

Query: 86  CLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLG-WMGIFDI----PTSESVLIEG 140
           C N  V ++E +    Q+VVPV Y       G  P LG W+ + D+    P  +S     
Sbjct: 74  CQN-FVNVIECQRNKNQVVVPVLY-------GESPLLGEWLSVLDLRDLSPVHQSRKDCS 125

Query: 141 NVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIAS 200
           +   + + + D++        +G+ S + EIE  +         VGIWG+ GIGKTT+A 
Sbjct: 126 DSQFVKEIVRDVYEKLFYKGRIGIYSKLLEIEKMVCKQPLGIRCVGIWGMPGIGKTTLAK 185

Query: 201 AIYSNISSHFEGSYFMQN------------------IRDESEKVGGLANIHLNFERRRLS 242
           A++  +S  F+ S F+++                  +++ +   GG     L+  R +L+
Sbjct: 186 AVFDQMSGEFDASCFIEDYSKAIQEKGVYCLLEEQFLKENAGGAGGTVT-KLSLLRNKLN 244

Query: 243 RMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKEL 302
             +VL+V  D+     ++  +G  D F P S +IIT+RD Q+    R  RV  ++EV  L
Sbjct: 245 NKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSRDKQVF---RLCRVDQIYEVLGL 301

Query: 303 SYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE-EEWESA 361
           +  ++L LFS  A   +       E+S  V+KYA+G PLAL + G  LKG     E E+ 
Sbjct: 302 NEKEALQLFSFCASIDDMAEQSLHEVSMKVVKYASGHPLALSLYGRELKGKKTLPEMETT 361

Query: 362 VNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIG 421
             +LK  P       +K  YD L+D E+NIFLD ACFF+G +   VM  L+ C F   +G
Sbjct: 362 FLELKEHPPTMFVDAIKSCYDTLNDREKNIFLDIACFFEGENVDYVMQLLEGCGFFPHVG 421

Query: 422 ISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS 481
           I  LV K LVTI+ N++ MH+L+Q +G +I+ +E+ +   +R RLW P  I  +L +N  
Sbjct: 422 IDVLVEKCLVTITENQVRMHNLIQNVGRQIINRET-RQTKRRDRLWEPWSIKYLLEDNGE 480

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIED--LDLKETAIEELPSSIGNLSRLVDLD 539
              G +  +L+           + PE    IE   LD    + +  P++  N+  L  L 
Sbjct: 481 KENGEHKTTLER---------AQGPE---EIEGMFLDTSNFSFDIKPAAFDNMLNLRLLK 528

Query: 540 LTNCSG--------LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEK 591
           + + +         LK   + L N   LR L+      L+ LP+    +  +E +N+   
Sbjct: 529 IYSSNPEVHHVKNFLKGSLNSLPN--ELRLLHWEN-YPLQFLPQNFDPIHLVE-INMPYS 584

Query: 592 DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSS---IHARHCTSLKTLSNSSTLLT 648
             +K+    K L  L  +RL + ++L  + ++    +   I  + CT L++   +  LL 
Sbjct: 585 QLKKLWGGTKNLEMLKTIRLCHSQQLVDIDDVLKAQNLEVIDLQGCTRLQSFPATGQLL- 643

Query: 649 RSSKHWDIFNFSNCS 663
               H    N S C+
Sbjct: 644 ----HLRTVNLSGCT 654



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 31/183 (16%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSI--GNLSRLVDL 538
           S P    L  L+ + L GC+ +K FPEI  NIE L+L+ T I ELP SI   N + L++L
Sbjct: 635 SFPATGQLLHLRTVNLSGCTEIKSFPEIPPNIETLNLQGTGIIELPLSIIKPNYTELLNL 694

Query: 539 ----------------DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES 582
                           DL   + L  +S+   NL  L  L L  C +L  LP  + NLE 
Sbjct: 695 LAEIPGLSGVSNLEQSDLKPLTSLMKMSTSNQNLGKLICLELKDCARLRSLP-NMNNLEL 753

Query: 583 LEYLNLAE----KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH-CTSL 637
           L+ L+L+     +  +  P ++K+L             ++ +P+LP    +   H C SL
Sbjct: 754 LKVLDLSGCSELETIQGFPQNLKELYLAG-------TAVRQVPQLPQSLELFNAHGCVSL 806

Query: 638 KTL 640
           K++
Sbjct: 807 KSI 809



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 374  QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL-DACRFSAKIGISRLVGKSLVT 432
            ++VL+VSYDGL + ++ +FL  A  F   D  LV   + ++       G+  L  +SL+ 
Sbjct: 1034 EEVLRVSYDGLQEIDKALFLYLAGLFNDEDVDLVAPLIANSIDMDVSYGLKVLADRSLIR 1093

Query: 433  ISNN-KITMHDLLQEMGGEIVRQESIK 458
            +S+N +I M++L QEMG EI+  ES K
Sbjct: 1094 VSSNGEIVMYNLQQEMGKEILHTESKK 1120


>gi|15242570|ref|NP_198826.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332007127|gb|AED94510.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1017

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 222/677 (32%), Positives = 315/677 (46%), Gaps = 117/677 (17%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D RH+ VSHL  AL    I TF DDK L  G+ IS  L  AIEGS   +V
Sbjct: 12  YDVFLSFRGEDTRHSIVSHLYEALTSRGIATFKDDKRLELGDHISEELQRAIEGSDFVVV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIP--- 131
           + SE Y +SRWCL EL  I+E + +    V PVFY V+PS   Y      +G FD+    
Sbjct: 72  VLSENYPTSRWCLMELQSIMELQMEGRLGVFPVFYRVEPSAVRY-----QLGSFDLEGYQ 126

Query: 132 ------------------------------TSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                           E+ ++   V DISK+ +     D ++  
Sbjct: 127 RDPQMADMVPKWRQALKLIADLSGVASGQCIDEATMVRKIVEDISKRKTLKHKIDFRN-F 185

Query: 162 VGVESIIKEIES--QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           VGV++ ++ ++S   + S + E   +GIWG+GGIGKTTIA  +Y  +SS F  SYF Q+I
Sbjct: 186 VGVDTHLQGLKSLLDMDSNNDEVRMIGIWGMGGIGKTTIAKCLYDQLSSQFTASYFTQDI 245

Query: 220 RDESEKVGGLANIHLNFE----------------------RRRLSRMKVLIVFYDLTDLK 257
           +   +++  L   HL                           RL   KVL+V   +  L 
Sbjct: 246 KGIHKELDLL---HLQNRLLYNTLGDDIMPWSVEAGREVIAARLGNHKVLLVLDGVDKLV 302

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF- 316
           QI  L      F   SR+IITTRD  LL +     V  +++VK L   DSL +F + AF 
Sbjct: 303 QIHALAKETRWFGRQSRIIITTRDKGLLNS---CGVKTIYDVKCLDDKDSLQMFKQIAFE 359

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM--SEEEWESAVNKLKRMPHMDIQ 374
           G + P+  F +LS    + A+G+P ALQ    +L+G   S EEWE AV  L+  P  +I 
Sbjct: 360 GGSPPSVDFEQLSIRAARLAHGLPSALQAYALFLRGRANSPEEWEEAVCGLESTPDENIM 419

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI- 433
           ++LK+SY+GL    QN FL  AC F G+    V + LD  R  + + +  L  KSL+ I 
Sbjct: 420 EILKISYEGLAKAHQNAFLHVACLFNGDTFRRVTSLLDVSRMESNLWMRVLAEKSLINIT 479

Query: 434 SNNKITMHDLLQEMGGEIVRQES--IKDP------------------------------G 461
           SN  +T+H L+++MG EI+      I DP                              G
Sbjct: 480 SNGYVTLHKLVEQMGREIMLASGKFIGDPETIHDTLGMGQTESISLHICEMTCAFSMATG 539

Query: 462 KRSRLWHPE--DIYQVLNENTSLPTGINLDSLKE----LYLGGCSNLKRFP---EISCNI 512
             SR++      +Y+ +NE  S+   I  D        L       L +FP      C +
Sbjct: 540 VFSRMYKLRFLKVYKHVNERESMLQVIPEDEYPSINCLLLHWDAFPLSKFPLRFNTYCLV 599

Query: 513 EDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK 572
           E L+L+ + +E L S +     L  LD+T    LK +    C  +    L    C +L+ 
Sbjct: 600 E-LNLRHSNLETLWSGVLKFGHLRKLDVTGSKNLKQLPDLSCAEELDELLLEQ-CKRLKG 657

Query: 573 LPEEIGNLESLEYLNLA 589
           +PE I    +L  LNL+
Sbjct: 658 IPESIAERSTLGRLNLS 674



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 26/154 (16%)

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV-------SSRLCNLKSLR---- 560
           +E+LDL     E LP  +  LSRL  L L NCS LK +       S  L N K+LR    
Sbjct: 813 LENLDLSGNDFENLPEDMNRLSRLKTLCLRNCSKLKELPELTQVQSLTLSNCKNLRSLVK 872

Query: 561 --------------RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                          L L  C  ++ L +++ +   L YL+L+  DF+K+PSS++ L+ L
Sbjct: 873 ISDASQDPSLYSLLELCLDNCKNVKSLSDQLSHFPKLAYLDLSSHDFKKLPSSIRDLTSL 932

Query: 607 SDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
             L L NCK+L+SL ELP     + A+ C SL+ 
Sbjct: 933 VTLCLNNCKKLKSLEELPLSLQFLDAKGCDSLEA 966



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 5/127 (3%)

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCS----GLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           +  ++ + P  I  L++   L++   S    G         ++  L++L L   L ++KL
Sbjct: 745 RTVSVHQAPRLISELNKSTTLNIRRFSYKENGRPVTLHSFPDIPGLKQLELVN-LNIQKL 803

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH 633
            + IG+ E LE L+L+  DFE +P  M +LS+L  L L+NC +L+ LPEL    S+   +
Sbjct: 804 SDGIGHFEFLENLDLSGNDFENLPEDMNRLSRLKTLCLRNCSKLKELPELTQVQSLTLSN 863

Query: 634 CTSLKTL 640
           C +L++L
Sbjct: 864 CKNLRSL 870


>gi|20466558|gb|AAM20596.1| putative disease resistance protein [Arabidopsis thaliana]
          Length = 992

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 211/682 (30%), Positives = 332/682 (48%), Gaps = 116/682 (17%)

Query: 47  FIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVP 106
           F D  + RG  ISP L+  I  S+ISIV+ S+ YASS WCL+EL++IL+ K   GQIV+ 
Sbjct: 2   FDDQAIERGQTISPELTRGIRESRISIVVLSKNYASSSWCLDELLEILKCKEDIGQIVMT 61

Query: 107 VFYLVDPSDAG------------------------YCPSLGWMG-----IFDIPTSESVL 137
           VFY VD SD                          +  +L  +G      F    +ES +
Sbjct: 62  VFYGVDLSDVRKQTGDILKVFKKTCSGKTEEKRRRWSQALNDVGNIAGEHFLNWDNESKM 121

Query: 138 IEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKT 196
           +E    DIS K++     D +D +VGVE+ +++I+S L L    E   VGI+G  GIGKT
Sbjct: 122 MEKIARDISNKVNTTISRDFED-MVGVETHLEKIQSLLHLDNDDEAMIVGIYGPAGIGKT 180

Query: 197 TIASAIYSNISSHFEGSYFMQNIR-------DE-----------SEKV---GGLANIHLN 235
           TIA A++S +S  F+ + FM+N+R       DE             K+    G+   +L+
Sbjct: 181 TIARALHSLLSDRFQLTCFMENLRGSYNSSLDEYGLKLQLQEQLLSKILNQTGMRVYNLS 240

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             +  L   KVLI+  D+ DLKQ++ L      F PGSRV++TT + +LLK H    + +
Sbjct: 241 AIQGMLCDQKVLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQH--DDIKN 298

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            + V   +  ++  +F R  F Q+ P  GF  LS  VIK  + +PL L V+G YL+  +E
Sbjct: 299 TYYVDFPTQKEARQIFCRYGFKQSTPQDGFENLSERVIKLCSKLPLGLSVMGLYLRKKTE 358

Query: 356 EEWESAVNKLKR---MPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
           ++WE  +++L+        +I++VL+V YDGL +++Q +FL  A FF   D   V   L 
Sbjct: 359 DDWEDILHRLESSFDSVDRNIERVLRVGYDGLHEKDQLLFLLIAFFFNYKDDDHVKAMLA 418

Query: 413 ACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
               + ++G+  L  KSL+  S+   I MH LLQ++G E V+++   +P KR  L    +
Sbjct: 419 DNNLNVRLGLKTLEYKSLIQRSSGGNIVMHKLLQQVGREAVQRQ---EPWKRQILIDAHE 475

Query: 472 IYQVLNEN-------------TSLPTGINLDS-----LKELYLGGCSNLKRFPEISCNIE 513
           I  VL  +             +++P G+++ +     ++ L        +R   +  N+ 
Sbjct: 476 ICNVLETDSGCANVMGISFNVSTIPNGVHISAKAFQNMRNLRFLSIYETRRDVNLRVNVP 535

Query: 514 D--------------------------------LDLKETAIEELPSSIGNLSRLVDLDLT 541
           D                                L+L+   +E+L      L+ L  L+L 
Sbjct: 536 DDMDFPHRLRSLHWEVYPGKSLPSTFRPEYLVELNLQNNKLEKLWEGTQPLTNLNKLELC 595

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYL--NLAEKDFEKIPSS 599
               LK +   L +  +L+RL+L+GC  L ++P  +GNL  LE L  NL  +  + +P+ 
Sbjct: 596 GSLRLKELPD-LSSATNLKRLDLTGCWSLVEIPSSVGNLHKLEELEMNLCLQ-LQVVPTH 653

Query: 600 MKQLSKLSDLRLQNCKRLQSLP 621
              L+ L  LR+  C  L+  P
Sbjct: 654 F-NLASLRSLRMLGCWELRKFP 674



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 92/196 (46%), Gaps = 44/196 (22%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +L +L L G   LK  P++S   N++ LDL    ++ E+PSS+GNL +L +L++  C 
Sbjct: 586 LTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPSSVGNLHKLEELEMNLCL 645

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL--------------------- 583
            L+ V +   NL SLR L + GC +L K P    N+ SL                     
Sbjct: 646 QLQVVPTHF-NLASLRSLRMLGCWELRKFPGISTNITSLVIGDAMLEEMLESIRLWSCLE 704

Query: 584 -------------EYLNLAEK---DFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
                          + L EK   D E+IP  +K L  L  L +  C +L SLPELP GS
Sbjct: 705 TLVVYGSVITHNFWAVTLIEKMGTDIERIPDCIKDLPALKSLYIGGCPKLFSLPELP-GS 763

Query: 628 --SIHARHCTSLKTLS 641
              +    C SLKT+S
Sbjct: 764 LRRLTVETCESLKTVS 779


>gi|297805922|ref|XP_002870845.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316681|gb|EFH47104.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 836

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 182/549 (33%), Positives = 277/549 (50%), Gaps = 71/549 (12%)

Query: 137 LIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKT 196
           + E    D+S  L+   PS + D L+G+ + +KE+ES L   S E   +GIWG  GIGKT
Sbjct: 1   MTEKIATDVSDMLNRYSPSRDFDGLIGMGAHMKEMESLLCLDSDEVRMIGIWGPSGIGKT 60

Query: 197 TIASAIYSNISSHFEGSYFMQNIRD------------------ESEKVGGLAN------I 232
           TIA  +YS  S +FE S FM+NI++                  + + +  + N       
Sbjct: 61  TIARVLYSQFSENFELSIFMENIKELMYTRPVCSDEYSAKIQLQKQFLSQIINHKDMELP 120

Query: 233 HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
           HL   + RL+  +VLIV   +    Q+D +      F  GSR+IITT+D +LLK H    
Sbjct: 121 HLGVAQDRLNDKRVLIVLDSIDQSIQLDAIAKETRWFGHGSRIIITTQDQRLLKAH---G 177

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           + H+++V+  S  ++  +F   AFGQN P  GF EL+  V K    +PL L+V+GS+ +G
Sbjct: 178 INHIYKVEFPSAYEAYQIFCMYAFGQNFPKDGFEELAWQVTKLLGNLPLGLRVMGSHFRG 237

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
           MS  EW +A+ +LK      IQ +LK SYD L +E++++FL  AC F   +   V ++L 
Sbjct: 238 MSRHEWVNALPRLKIRLDASIQSILKFSYDALCEEDKDLFLHIACLFNDEEMVRVEDYLA 297

Query: 413 ACRFSAKIGISRLVGKSLVTI-----SNNKITMHDLLQEMGGEIVR----QESIKDPGKR 463
           +     + G+  L  KSL+ I     ++ +I MH+LL ++G +IVR     +SI++PGKR
Sbjct: 298 SSFLDVRQGLHLLAEKSLIAIEIFSTNHTRIKMHNLLVQLGRDIVRHKPGHQSIREPGKR 357

Query: 464 SRLWHPEDIYQVLNENTSLPTGINLDSLKELY-LGGCSNL-KRFPEISCNIEDLDLK--- 518
             L    DI +VL +NT     I +  L ELY L G  N+ +R  E   N++ L      
Sbjct: 358 QFLVDARDICEVLTDNTGSRNVIGI--LFELYNLSGELNISERAFEGLSNLKFLRFHGPY 415

Query: 519 --ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCN--------------------- 555
             E     LP  + NL R + L   +C  +K + S  C                      
Sbjct: 416 DGEGKQLYLPQGLNNLPRKLRLIEWSCFPMKCLPSNFCTKYLVHIDMWNSKLQNMWQGNQ 475

Query: 556 -LKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQ 612
            L +L+R++L     L++LP+     NLE L     +     ++PSS+  L KL  L L+
Sbjct: 476 VLGNLKRMDLWESKHLKELPDLSTATNLEKLTLFGCS--SLAELPSSLGNLQKLRMLNLR 533

Query: 613 NCKRLQSLP 621
            C +L++LP
Sbjct: 534 GCSKLEALP 542



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 28/164 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT INL+SL +L L  C  +K FPEIS NI+DL L  TAI+E+PS+I + S L +L++
Sbjct: 540 ALPTNINLESLDDLDLADCLLIKSFPEISTNIKDLMLTYTAIKEVPSTIKSWSHLRNLEM 599

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +    LK                        + P  +  +  L Y N  + + ++IP  +
Sbjct: 600 SYNDNLK------------------------EFPHALDIITKL-YFN--DTEIQEIPLWV 632

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           K++S+L  L L+ CKRL ++P+L    S++ A +C SL+ L  S
Sbjct: 633 KKISRLQTLVLEGCKRLVTIPQLSDSLSNVTAINCQSLERLDFS 676


>gi|255553685|ref|XP_002517883.1| transmembrane receptor, putative [Ricinus communis]
 gi|223542865|gb|EEF44401.1| transmembrane receptor, putative [Ricinus communis]
          Length = 753

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 176/516 (34%), Positives = 261/516 (50%), Gaps = 70/516 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSF G+D R  F SHL   LC++ I TF DD+ L +G      L  AI+ S+I +
Sbjct: 27  KYDVFLSFMGEDTRKKFTSHLYKELCQKGIITFKDDRELPKGEPFPTELPKAIQDSRILV 86

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTS 133
           V+FSE YA+S WCL+ELVKILE K    Q V+P+FY V P +          G F  P  
Sbjct: 87  VVFSENYATSTWCLDELVKILECKKAGRQTVLPIFYDVIPDEVREQD-----GKFGEPFI 141

Query: 134 E-SVLIEGNVNDI------SKKLSDL--FPSDNKDQLVGVESIIKEIESQLLSGSTEFNT 184
           E  +L + N+  +      S ++++L  +   ++++   ++ I++ I +QL   S     
Sbjct: 142 EYEILYKDNIEKVQQWRVASTEIANLSGWHLHDREEADFIQDIVESILNQLRRSSQSIAN 201

Query: 185 VGIWGIGGIGKTTIASAI--YSNISSHFEGSYFMQNIRDESEKVGG-------------- 228
             +     + K  +   +   S +           ++R ES    G              
Sbjct: 202 DFVGMDSRLEKLILLLDMGQLSEVRIIGICGMGGIDVRSESSNRFGLLSLQKQLLSATLM 261

Query: 229 -----LANIHLNFE--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLD--GFVPGSRVIITT 279
                + +++   E  R RL R K  I+  D+  L+Q++ LIG+ D   F  GSR+IITT
Sbjct: 262 KKDIEVYDVYKGTEEIRNRLCRKKAFIILDDVNQLEQLEFLIGKRDEHWFGAGSRIIITT 321

Query: 280 RDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGV 339
           R+ +LL N  G  V  ++ V+EL+  ++  LF   AF  +                    
Sbjct: 322 REEKLL-NQYG--VDEIYRVEELNDREAFQLFCSKAFKNSCTHLN--------------- 363

Query: 340 PLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFF 399
                 + S+LK     EW S ++KLK +P   I   LK+SYDGLD+  Q +FLD ACFF
Sbjct: 364 ------MWSFLK----REWISTLDKLKEIPDEKILNKLKISYDGLDEASQKVFLDIACFF 413

Query: 400 KGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKD 459
           KG ++  V   L++C      GI  L+ KSL+TIS   + MHDL+QEMG EIV +ES ++
Sbjct: 414 KGKNKDYVTKVLESCGLFPDRGIRELIDKSLITISCGDVRMHDLVQEMGREIVCRESREE 473

Query: 460 PGKRSRLWHPEDIY--QVLNENTSLPTGINLDSLKE 493
           PG+RSR+W  +D+Y  Q+ +  TS    I L S  E
Sbjct: 474 PGQRSRIWRYQDVYDIQMKDMETSQVKAIVLQSWVE 509


>gi|357468491|ref|XP_003604530.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355505585|gb|AES86727.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 950

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 206/627 (32%), Positives = 299/627 (47%), Gaps = 137/627 (21%)

Query: 160 QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           +LVG++  I ++ S L   S +   +GIWG+GGIGKTTIA  I+S   S ++G  F++ +
Sbjct: 32  RLVGIDKPIADLNSLLKKESEQVRVIGIWGMGGIGKTTIAEEIFSQNRSDYDGCCFLEKV 91

Query: 220 RDESEKVGGLANIHLNFE---------------RRRLSRMKVLIVFYDLTDLKQIDLLIG 264
            +  +  GG+ ++  +                  RR+ RMKVLIV  D+ +   +++L G
Sbjct: 92  SERLKAHGGIGSLKESLLSELLKESVKELSSGIERRIGRMKVLIVLDDVNETDLLEMLFG 151

Query: 265 RLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAG 324
            LD F   SR+I+T+R+ Q+L  +       + EV+ L  +++L LF+ NAF Q+H    
Sbjct: 152 SLDWFRLDSRIIVTSRNKQVLVTNEVDN-DDLCEVRVLDSSEALELFNLNAFKQSHLEME 210

Query: 325 FLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL 384
           + ELS  VI+YA GVPL L+VL   L+G  +E WES ++KLKR+P   +  V+++SYD L
Sbjct: 211 YYELSERVIEYAKGVPLVLKVLAHMLRGKCKEVWESKLDKLKRLPIPKVHDVMRLSYDDL 270

Query: 385 DDEEQNIFLDTACFFKGNDQYL--VMNFLDACRFSAKI--GISRLVGKSLVTIS-NNKIT 439
           D  EQ  FLD ACFF G D  L  + + L  C     +  G+  L  K+L+TIS +N I+
Sbjct: 271 DRLEQKYFLDIACFFNGLDLELDYMKHLLKDCDSDNYVAGGLETLKDKALITISEDNVIS 330

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN----------------ENTSLP 483
           MHD+LQEMG E+VRQES  D GK SRLW  +DI+ VL                 EN  L 
Sbjct: 331 MHDILQEMGWEVVRQES-SDLGKCSRLWDVDDIFDVLKNDKGSDAIRSIRVDFLENRKLK 389

Query: 484 TG----------------INLDSLKELYLGG--------------CSNLKRFPE------ 507
                             ++ D   +L+  G              C  LK FPE      
Sbjct: 390 LSPHVFDKMTNLQFLNFWVDFDDYLDLFPQGLESFPTGLRYLHWVCYPLKSFPEKFSAEN 449

Query: 508 -------------ISCNIEDL-DLKETAI-----EELPS--------------------- 527
                        + C +++L +LKE  I     +ELP                      
Sbjct: 450 LVILDLYLSRMEKLWCGVQNLVNLKEVTISLASLKELPDFSKATNLKVLTVTVCPNLESV 509

Query: 528 --SIGNLSRLVDLDLTNCSGLKSVSSRL--------------------CNLKSLRRLNLS 565
             SI  L +LV LDL  C  L + +S                        L+++  L+LS
Sbjct: 510 HPSIFTLEKLVRLDLGGCRSLTTFTSNSNLSSLHYLSLSGCEKLSEFSVTLENIVELDLS 569

Query: 566 GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            C  +  LP   G   +LE L L     E IPSS+K L++L  L +  CK+L +LPELP 
Sbjct: 570 WC-PINALPSSFGCQSNLETLVLKATQIESIPSSIKDLTRLRKLNICGCKKLLALPELPL 628

Query: 626 GSSIHARHCTSLKTLSNSSTLLTRSSK 652
              I      +++ + +S   LTR  K
Sbjct: 629 SVEILDLRSCNIEIIPSSIKNLTRLRK 655



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 88/167 (52%), Gaps = 4/167 (2%)

Query: 498 GCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
           GC  L  F     NI +LDL    I  LPSS G  S L  L L   + ++S+ S + +L 
Sbjct: 549 GCEKLSEFSVTLENIVELDLSWCPINALPSSFGCQSNLETLVL-KATQIESIPSSIKDLT 607

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
            LR+LN+ GC KL  LPE      S+E L+L   + E IPSS+K L++L  L ++   +L
Sbjct: 608 RLRKLNICGCKKLLALPELPL---SVEILDLRSCNIEIIPSSIKNLTRLRKLDIRFSNKL 664

Query: 618 QSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
            +LPEL     I   HC SLK++   ST+  +  ++     F NC N
Sbjct: 665 LALPELSSSVEILLVHCDSLKSVLFPSTVAEQFKENKKEVKFWNCLN 711


>gi|15223444|ref|NP_174038.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332192670|gb|AEE30791.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1556

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 228/769 (29%), Positives = 360/769 (46%), Gaps = 156/769 (20%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALC-REKIETFIDDK-LNRGNEISPSLSSAIEGSKIS 72
           K+ VFLSFRG D R NF   L  AL  ++ +  F D++ + +G++I PSL  AIE S  S
Sbjct: 175 KYSVFLSFRGFDTRTNFCERLYIALNEKQNVRVFRDNEGMEKGDKIDPSLFEAIEDSAAS 234

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG--------------- 117
           ++I S  YA+S WCL+EL  + + ++   + ++P+FY V+P D                 
Sbjct: 235 VIILSTNYANSSWCLDELALLCDLRSSLKRPMIPIFYGVNPEDVRKQSGEFRKDFEEKAK 294

Query: 118 ---------YCPSLGWMGIFDIP----TSESVLIEGNVND--ISKKLSDLF--------- 153
                    +  ++  +G  +IP    T+++V   G+ N+    +K+ D+          
Sbjct: 295 SFDEETIQRWKRAMNLVG--NIPGYVCTAKTV---GDDNEGINREKVDDMIDLVVKKVVA 349

Query: 154 -----PSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
                P    D  VG+ES IK++        S+    +G++G+GGIGKTT+A A Y+ I 
Sbjct: 350 AVRNRPEIVADYTVGLESPIKDLMKLFNTESSSGIQVMGLYGMGGIGKTTLAKAFYNKII 409

Query: 208 SHF-EGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKV 246
            +F     F++++R +S    GL N+                     L   +  +   K+
Sbjct: 410 VNFNRHRVFIESVRGKSSDQDGLVNLQKTLIKELFRLVPEIEDVSIGLEKIKENVHEKKI 469

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           ++V  D+  + Q++ L+G    +  GS ++ITTRD ++L       V   +EVK L+   
Sbjct: 470 IVVLDDVDHIDQVNALVGETSWYGEGSLIVITTRDSEILSK---LSVNQQYEVKCLTEPQ 526

Query: 307 SLTLFSRNAF-GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           +L LFS  +   +  P  G LELS  + +    +PLA++V GS+     E EW+  + KL
Sbjct: 527 ALKLFSFYSLRKEKPPTQGLLELSKKIAEVTGLLPLAVKVFGSHFYDKDENEWQVELEKL 586

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND--QYLVMNFLDACRFSAKIGIS 423
           K      +  VL +S+  LD+EE+ IFLD AC F   D  +  V++ L  C  +A+  + 
Sbjct: 587 KTQQD-KLHGVLALSFKSLDEEEKKIFLDIACLFLKMDITKEEVVDILKGCGLNAEAALR 645

Query: 424 RLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENT 480
            L+ KSL+TI +++ + MHD +++MG ++V +ES  DP  RSRLW   +I  VL+  + T
Sbjct: 646 VLIQKSLLTILTDDTLWMHDQIRDMGRQMVHKESSDDPEMRSRLWDRGEIMNVLDYMKGT 705

Query: 481 SLPTGINLD---------SLKELYLGGCSN--------------LKRFP--------EIS 509
           S   GI LD         +  E++     N              L RFP        EI+
Sbjct: 706 SSIRGIVLDFNKKFARDHTADEIFSSNLRNNPGIYSVFNYLKNKLVRFPAEEKPKRSEIT 765

Query: 510 CNIE--------------------DLDL----------KETAIEELPSSIGNLSR-LVDL 538
             +E                    DL L          K   +E LP  I  LSR L  L
Sbjct: 766 IPVESFAPMKKLRLLQINNVELEGDLKLLPSELKWIQWKGFPLENLPPDI--LSRQLGVL 823

Query: 539 DLTNCSGLKSVSS--RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEK 595
           DL+  SG++ V +  R    ++L+ +NL GC  LE +P ++ N  +LE L L   +   K
Sbjct: 824 DLSE-SGVRRVKTLPRKRGDENLKVVNLRGCHGLEAIP-DLSNHNALEKLVLERCNLLVK 881

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQS----LPELPCGSSIHARHCTSLKTL 640
           +P S+  L KL  L L+ C  L      +  L C        C++L  L
Sbjct: 882 VPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVL 930



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 27/180 (15%)

Query: 470  EDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEEL 525
            ED+Y       +LP+ I +L +L++L+L  C++L   PE      ++++L +  +A+EEL
Sbjct: 988  EDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEEL 1047

Query: 526  PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL-----------------------RRL 562
            P   G+L  L DL   +C  LK V S +  L SL                       R+L
Sbjct: 1048 PIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHFIRQL 1107

Query: 563  NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            +L  C  L+ LP+ IG +++L  LNL   + E++P    +L  L +LR+ NCK L+ LP+
Sbjct: 1108 DLRNCKSLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLKRLPK 1167



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 25/196 (12%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            L++L EL +  C  LKR P+   +++ L    ++ET + ELP S GNLS L+ L++    
Sbjct: 1148 LENLVELRMNNCKMLKRLPKSFGDLKSLHRLYMQETLVAELPESFGNLSNLMVLEMLKKP 1207

Query: 545  GLKSVSSRLCNLKSLRRL-----NLSGCLKLE-----------KLPEEIGNLESLEYLNL 588
              +   S +       R      + S  LKLE           K+P+++  L  L  LNL
Sbjct: 1208 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNL 1267

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
                F  +PSS+ +LS L +L L++C+ L+ LP LPC    ++  +C SL+++S+ S L 
Sbjct: 1268 GNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELT 1327

Query: 648  TRSSKHWDIFNFSNCS 663
              +       N +NC+
Sbjct: 1328 ILTD-----LNLTNCA 1338



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 3/144 (2%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCN--IEDLDLKE-TAIEELPSSIGNLSRLVD 537
           +LP     ++LK + L GC  L+  P++S +  +E L L+    + ++P S+GNL +L+ 
Sbjct: 835 TLPRKRGDENLKVVNLRGCHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQ 894

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL  CS L      +  LK L +  LSGC  L  LPE IG++  L+ L L       +P
Sbjct: 895 LDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLP 954

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP 621
            S+ +L KL  L L  C+ ++ LP
Sbjct: 955 YSIFRLQKLEKLSLMGCRSIEELP 978



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 31/172 (18%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISC-----NIEDLDLKETAIEELPSSIGNLS 533
            ++LP  I  L  L++L L GC +++  P  SC     ++EDL L +TA+  LPSSIG+L 
Sbjct: 951  SNLPYSIFRLQKLEKLSLMGCRSIEELP--SCVGYLTSLEDLYLDDTALRNLPSSIGDLK 1008

Query: 534  RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG-----------------------CLKL 570
             L  L L  C+ L ++   +  L SL+ L ++G                       C  L
Sbjct: 1009 NLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSLLCLTDLSAGDCKFL 1068

Query: 571  EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            +++P  IG L SL  L L     E +P  +  L  +  L L+NCK L++LP+
Sbjct: 1069 KQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPK 1120



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 9/106 (8%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD----KLNRGNEISPSLSSAIEGSK 70
           K D FLSF+ +D  HNF   L  AL +E++  + DD      +  +E+ PSL  AIE S 
Sbjct: 16  KWDAFLSFQ-RDTSHNFTDRLYEALVKEELRVWNDDLERVDHDHDHELRPSLVEAIEDSV 74

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
             +V+ S  YA+S   L EL K+ + K     ++VP+FY V+P + 
Sbjct: 75  AFVVVLSPNYANSHLRLEELAKLCDLKC----LMVPIFYKVEPREV 116



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 29/139 (20%)

Query: 488  LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
            L  L++ +L GCSNL   PE    + C +++L L  TAI  LP SI  L +L        
Sbjct: 913  LKCLEKFFLSGCSNLSVLPENIGSMPC-LKELLLDGTAISNLPYSIFRLQKL-------- 963

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
                             +L+L GC  +E+LP  +G L SLE L L +     +PSS+  L
Sbjct: 964  ----------------EKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTALRNLPSSIGDL 1007

Query: 604  SKLSDLRLQNCKRLQSLPE 622
              L  L L  C  L ++PE
Sbjct: 1008 KNLQKLHLMRCTSLSTIPE 1026



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 481  SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            SLP+  + L +L+EL L  C  LKR P + C +E L+L      E  S +  L+ L DL+
Sbjct: 1274 SLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLN 1333

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            LTNC+ +  +   L +L +L+RL ++GC
Sbjct: 1334 LTNCAKVVDIPG-LEHLTALKRLYMTGC 1360



 Score = 45.8 bits (107), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 19/150 (12%)

Query: 498  GCSNLKRFPEIS------CNIEDLDLKETAIE-ELPSSIGNLSRLVDLDLTNCSGLKSVS 550
            G S   RF E+         +E+LD     I  ++P  +  LS L+ L+L N +   S+ 
Sbjct: 1218 GTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGN-NYFHSLP 1276

Query: 551  SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
            S L  L +L+ L+L  C +L++LP     LE L   NLA     +  S + +L+ L+DL 
Sbjct: 1277 SSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL---NLANCFSLESVSDLSELTILTDLN 1333

Query: 611  LQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            L NC ++  +P L         H T+LK L
Sbjct: 1334 LTNCAKVVDIPGL--------EHLTALKRL 1355


>gi|10121909|gb|AAG13419.1|AC000348_16 T7N9.24 [Arabidopsis thaliana]
          Length = 1590

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 228/769 (29%), Positives = 360/769 (46%), Gaps = 156/769 (20%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALC-REKIETFIDDK-LNRGNEISPSLSSAIEGSKIS 72
           K+ VFLSFRG D R NF   L  AL  ++ +  F D++ + +G++I PSL  AIE S  S
Sbjct: 209 KYSVFLSFRGFDTRTNFCERLYIALNEKQNVRVFRDNEGMEKGDKIDPSLFEAIEDSAAS 268

Query: 73  IVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAG--------------- 117
           ++I S  YA+S WCL+EL  + + ++   + ++P+FY V+P D                 
Sbjct: 269 VIILSTNYANSSWCLDELALLCDLRSSLKRPMIPIFYGVNPEDVRKQSGEFRKDFEEKAK 328

Query: 118 ---------YCPSLGWMGIFDIP----TSESVLIEGNVND--ISKKLSDLF--------- 153
                    +  ++  +G  +IP    T+++V   G+ N+    +K+ D+          
Sbjct: 329 SFDEETIQRWKRAMNLVG--NIPGYVCTAKTV---GDDNEGINREKVDDMIDLVVKKVVA 383

Query: 154 -----PSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNIS 207
                P    D  VG+ES IK++        S+    +G++G+GGIGKTT+A A Y+ I 
Sbjct: 384 AVRNRPEIVADYTVGLESPIKDLMKLFNTESSSGIQVMGLYGMGGIGKTTLAKAFYNKII 443

Query: 208 SHF-EGSYFMQNIRDESEKVGGLANIH--------------------LNFERRRLSRMKV 246
            +F     F++++R +S    GL N+                     L   +  +   K+
Sbjct: 444 VNFNRHRVFIESVRGKSSDQDGLVNLQKTLIKELFRLVPEIEDVSIGLEKIKENVHEKKI 503

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           ++V  D+  + Q++ L+G    +  GS ++ITTRD ++L       V   +EVK L+   
Sbjct: 504 IVVLDDVDHIDQVNALVGETSWYGEGSLIVITTRDSEILSKLS---VNQQYEVKCLTEPQ 560

Query: 307 SLTLFSRNAFGQNHPAA-GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKL 365
           +L LFS  +  +  P   G LELS  + +    +PLA++V GS+     E EW+  + KL
Sbjct: 561 ALKLFSFYSLRKEKPPTQGLLELSKKIAEVTGLLPLAVKVFGSHFYDKDENEWQVELEKL 620

Query: 366 KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND--QYLVMNFLDACRFSAKIGIS 423
           K      +  VL +S+  LD+EE+ IFLD AC F   D  +  V++ L  C  +A+  + 
Sbjct: 621 KTQ-QDKLHGVLALSFKSLDEEEKKIFLDIACLFLKMDITKEEVVDILKGCGLNAEAALR 679

Query: 424 RLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENT 480
            L+ KSL+TI +++ + MHD +++MG ++V +ES  DP  RSRLW   +I  VL+  + T
Sbjct: 680 VLIQKSLLTILTDDTLWMHDQIRDMGRQMVHKESSDDPEMRSRLWDRGEIMNVLDYMKGT 739

Query: 481 SLPTGINLD---------SLKELYLGGCSN--------------LKRFP--------EIS 509
           S   GI LD         +  E++     N              L RFP        EI+
Sbjct: 740 SSIRGIVLDFNKKFARDHTADEIFSSNLRNNPGIYSVFNYLKNKLVRFPAEEKPKRSEIT 799

Query: 510 CNIE--------------------DLDL----------KETAIEELPSSIGNLSR-LVDL 538
             +E                    DL L          K   +E LP  I  LSR L  L
Sbjct: 800 IPVESFAPMKKLRLLQINNVELEGDLKLLPSELKWIQWKGFPLENLPPDI--LSRQLGVL 857

Query: 539 DLTNCSGLKSVSS--RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEK 595
           DL+  SG++ V +  R    ++L+ +NL GC  LE +P ++ N  +LE L L   +   K
Sbjct: 858 DLSE-SGVRRVKTLPRKRGDENLKVVNLRGCHGLEAIP-DLSNHNALEKLVLERCNLLVK 915

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQS----LPELPCGSSIHARHCTSLKTL 640
           +P S+  L KL  L L+ C  L      +  L C        C++L  L
Sbjct: 916 VPRSVGNLGKLLQLDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVL 964



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 27/180 (15%)

Query: 470  EDIYQVLNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEEL 525
            ED+Y       +LP+ I +L +L++L+L  C++L   PE      ++++L +  +A+EEL
Sbjct: 1022 EDLYLDDTALRNLPSSIGDLKNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEEL 1081

Query: 526  PSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSL-----------------------RRL 562
            P   G+L  L DL   +C  LK V S +  L SL                       R+L
Sbjct: 1082 PIETGSLLCLTDLSAGDCKFLKQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHFIRQL 1141

Query: 563  NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            +L  C  L+ LP+ IG +++L  LNL   + E++P    +L  L +LR+ NCK L+ LP+
Sbjct: 1142 DLRNCKSLKALPKTIGKMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLKRLPK 1201



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 25/196 (12%)

Query: 488  LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVDLDLTNCS 544
            L++L EL +  C  LKR P+   +++ L    ++ET + ELP S GNLS L+ L++    
Sbjct: 1182 LENLVELRMNNCKMLKRLPKSFGDLKSLHRLYMQETLVAELPESFGNLSNLMVLEMLKKP 1241

Query: 545  GLKSVSSRLCNLKSLRRL-----NLSGCLKLE-----------KLPEEIGNLESLEYLNL 588
              +   S +       R      + S  LKLE           K+P+++  L  L  LNL
Sbjct: 1242 LFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNL 1301

Query: 589  AEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLL 647
                F  +PSS+ +LS L +L L++C+ L+ LP LPC    ++  +C SL+++S+ S L 
Sbjct: 1302 GNNYFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELT 1361

Query: 648  TRSSKHWDIFNFSNCS 663
              +       N +NC+
Sbjct: 1362 ILTD-----LNLTNCA 1372



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 3/144 (2%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCN--IEDLDLKE-TAIEELPSSIGNLSRLVD 537
            +LP     ++LK + L GC  L+  P++S +  +E L L+    + ++P S+GNL +L+ 
Sbjct: 869  TLPRKRGDENLKVVNLRGCHGLEAIPDLSNHNALEKLVLERCNLLVKVPRSVGNLGKLLQ 928

Query: 538  LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
            LDL  CS L      +  LK L +  LSGC  L  LPE IG++  L+ L L       +P
Sbjct: 929  LDLRRCSSLSEFLGDVSGLKCLEKFFLSGCSNLSVLPENIGSMPCLKELLLDGTAISNLP 988

Query: 598  SSMKQLSKLSDLRLQNCKRLQSLP 621
             S+ +L KL  L L  C+ ++ LP
Sbjct: 989  YSIFRLQKLEKLSLMGCRSIEELP 1012



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 31/172 (18%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISC-----NIEDLDLKETAIEELPSSIGNLS 533
            ++LP  I  L  L++L L GC +++  P  SC     ++EDL L +TA+  LPSSIG+L 
Sbjct: 985  SNLPYSIFRLQKLEKLSLMGCRSIEELP--SCVGYLTSLEDLYLDDTALRNLPSSIGDLK 1042

Query: 534  RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSG-----------------------CLKL 570
             L  L L  C+ L ++   +  L SL+ L ++G                       C  L
Sbjct: 1043 NLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSLLCLTDLSAGDCKFL 1102

Query: 571  EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
            +++P  IG L SL  L L     E +P  +  L  +  L L+NCK L++LP+
Sbjct: 1103 KQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPK 1154



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 9/106 (8%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD----KLNRGNEISPSLSSAIEGSK 70
           K D FLSF+ +D  HNF   L  AL +E++  + DD      +  +E+ PSL  AIE S 
Sbjct: 50  KWDAFLSFQ-RDTSHNFTDRLYEALVKEELRVWNDDLERVDHDHDHELRPSLVEAIEDSV 108

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
             +V+ S  YA+S   L EL K+ + K     ++VP+FY V+P + 
Sbjct: 109 AFVVVLSPNYANSHLRLEELAKLCDLKC----LMVPIFYKVEPREV 150



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 29/139 (20%)

Query: 488  LDSLKELYLGGCSNLKRFPE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNC 543
            L  L++ +L GCSNL   PE    + C +++L L  TAI  LP SI  L +L        
Sbjct: 947  LKCLEKFFLSGCSNLSVLPENIGSMPC-LKELLLDGTAISNLPYSIFRLQKL-------- 997

Query: 544  SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQL 603
                             +L+L GC  +E+LP  +G L SLE L L +     +PSS+  L
Sbjct: 998  ----------------EKLSLMGCRSIEELPSCVGYLTSLEDLYLDDTALRNLPSSIGDL 1041

Query: 604  SKLSDLRLQNCKRLQSLPE 622
              L  L L  C  L ++PE
Sbjct: 1042 KNLQKLHLMRCTSLSTIPE 1060



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 2/88 (2%)

Query: 481  SLPTG-INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
            SLP+  + L +L+EL L  C  LKR P + C +E L+L      E  S +  L+ L DL+
Sbjct: 1308 SLPSSLVKLSNLQELSLRDCRELKRLPPLPCKLEQLNLANCFSLESVSDLSELTILTDLN 1367

Query: 540  LTNCSGLKSVSSRLCNLKSLRRLNLSGC 567
            LTNC+ +  +   L +L +L+RL ++GC
Sbjct: 1368 LTNCAKVVDIPG-LEHLTALKRLYMTGC 1394



 Score = 46.2 bits (108), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 19/150 (12%)

Query: 498  GCSNLKRFPEIS------CNIEDLDLKETAIE-ELPSSIGNLSRLVDLDLTNCSGLKSVS 550
            G S   RF E+         +E+LD     I  ++P  +  LS L+ L+L N +   S+ 
Sbjct: 1252 GTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPDDLEKLSCLMKLNLGN-NYFHSLP 1310

Query: 551  SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
            S L  L +L+ L+L  C +L++LP     LE L   NLA     +  S + +L+ L+DL 
Sbjct: 1311 SSLVKLSNLQELSLRDCRELKRLPPLPCKLEQL---NLANCFSLESVSDLSELTILTDLN 1367

Query: 611  LQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            L NC ++  +P L         H T+LK L
Sbjct: 1368 LTNCAKVVDIPGL--------EHLTALKRL 1389


>gi|297741885|emb|CBI33320.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 185/526 (35%), Positives = 266/526 (50%), Gaps = 94/526 (17%)

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDES---------EKVGGL---ANIHLN------- 235
           KTTIA AIY+  S  ++G  F++NIR+ S         E + G+    N  +N       
Sbjct: 21  KTTIAKAIYNETSDQYDGRSFLRNIRERSKGDILQLQQELLHGILRGKNFKINNVDEGIS 80

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             +R L+  +VL++F D+ +LKQ++ L    D F   S +IITTRD  +L  + G+ +  
Sbjct: 81  MIKRCLTSNRVLVIFDDVDELKQLEYLAEEKDWFHAKSTIIITTRDKHVLAQY-GADIP- 138

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            +EV +L+  ++  LFS  AF QN P   +  LS  +I YANG+PLAL+V+G+ L G   
Sbjct: 139 -YEVSKLNKEEATELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVIGASLFGKKI 197

Query: 356 EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR 415
             WESA+ KLK +PH +I  VL++S+DGLDD ++ +FLD ACFFKG+D+  V   L    
Sbjct: 198 SHWESALCKLKIIPHKEIHNVLRISFDGLDDIDKGMFLDVACFFKGDDKDFVSRILGP-- 255

Query: 416 FSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQV 475
             A+  I+ L  + L+TIS N + MHDL+Q MG E++RQE  +DPG+RSRLW   + Y V
Sbjct: 256 -HAEHVITTLADRCLITISKNMLDMHDLIQLMGWEVIRQECPEDPGRRSRLW-DSNAYHV 313

Query: 476 L--NENTSLPTGINLD------------SLKE---LYLGGCSNLKR-----------FPE 507
           L  N  T    G+ LD            S KE   L L    N +R           F  
Sbjct: 314 LIGNTGTRAIEGLFLDRCKFNLSQLTTKSFKEMNRLRLLKIHNPRRKLFLEDHLPRDFEF 373

Query: 508 ISCNIEDLDLKETAIEELP---------------SSIGNLSR-------LVDLDLTNCSG 545
            S  +  L      +E LP               S+I  L R       L   + ++   
Sbjct: 374 SSYELTYLHWDRYPLESLPLNFHAKNLVELLLRNSNIKQLWRGNKVLLLLFSYNFSSVPN 433

Query: 546 LKSVSSRLC-NLKSLRR----------LNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           L+ ++   C NL+ L R          L+ +GC KLE+ PE  GN+  L  L+L+     
Sbjct: 434 LEILTLEGCVNLERLPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIM 493

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
            +PSS+  L+ L  L LQ C +L  +P       IH  H +SL+ L
Sbjct: 494 DLPSSITHLNGLQTLLLQECAKLHKIP-------IHICHLSSLEVL 532



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 88/148 (59%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP GI     L+ L   GCS L+RFPEI  N+ +L   DL  TAI +LPSSI +L+ L  
Sbjct: 448 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGNMRELRVLDLSGTAIMDLPSSITHLNGLQT 507

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKI 596
           L L  C+ L  +   +C+L SL  L+L  C  +E  +P +I +L SL+ LNL    F  I
Sbjct: 508 LLLQECAKLHKIPIHICHLSSLEVLDLGHCNIMEGGIPSDICHLSSLQKLNLERGHFSSI 567

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P+++ QLS+L  L L +C  L+ +PELP
Sbjct: 568 PTTINQLSRLEVLNLSHCSNLEQIPELP 595


>gi|227438131|gb|ACP30555.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1074

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 219/683 (32%), Positives = 326/683 (47%), Gaps = 93/683 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVF+SFRG D R  FV HL  +L    I TF DD+ L  G+ I+  L  AI  S+ ++
Sbjct: 15  KYDVFISFRGPDTRKIFVGHLYGSLSIRGIFTFKDDRRLEPGDSITDELCQAIRTSRFAV 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL----------- 122
           V+ S+ YA+S WCL+EL  I+E        V P+FY V PSD  +   L           
Sbjct: 75  VVISKNYATSSWCLDELQLIMELVENKEIEVFPIFYEVKPSDVRHQQLLESFSLRMTEKV 134

Query: 123 -GWM-GIFDIP----------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKE 170
            GW   + DI           + ++ +IE  V +IS +L  + P   +D +VG+ + +K 
Sbjct: 135 PGWKKALKDIANRKGMESSKFSDDATMIEEIVQNISSRLLSMLPIRFRD-VVGMRAHVKV 193

Query: 171 IESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE-GSYFMQNIRDESEKVGG 228
           +   L +    +   +GI G GGIGKTTIA  +Y      F    YFM+N+     + G 
Sbjct: 194 LSPLLDMDSKDDARIIGIVGTGGIGKTTIAKYLYETHKLGFSPHHYFMENVAKLCREHGL 253

Query: 229 L-------------ANIHLNFERR-------RLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
           L              N+ L            RL   KV +VF D+ D++Q+D L   +  
Sbjct: 254 LHLQNQLLSSIFREKNVMLESVEHGRQQLEFRLRNAKVFLVFDDVDDVRQLDALAKEVQW 313

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF-GQNHPAAGFLE 327
           F PGSR++ITTRD  LL +        V++V+ L  + +L LF + AF G   P++ + +
Sbjct: 314 FAPGSRIVITTRDKSLLNS------CEVYDVEYLDDDKALLLFQQIAFKGGQPPSSVYSD 367

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
            S+   K A G+PLA++ LGS L+G SE EW+ A+   ++ P+ +I ++L +SY+ LD+ 
Sbjct: 368 FSSRASKLAQGLPLAVKALGSSLRGKSEMEWDKALRSFEKTPYDNIPRILNISYESLDEL 427

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQE 446
            +  FL  AC F G     V + L       + GI  L  KSL+ +S N +I MH LL++
Sbjct: 428 SKTAFLHVACLFNGELVSRVKSLLH----RGEDGIRVLAEKSLIDLSTNGRIAMHHLLEK 483

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE-NTSLPTGINLD--------------SL 491
           MG    R ES  D   +  LW   DI ++ ++  T+   GI LD               +
Sbjct: 484 MGR---RNESGNDLSLQPILWQWYDICRLADKAGTTRTEGIVLDVSERPNHIDWKVFMQM 540

Query: 492 KELYLGGCSNLKRFPEISCNIED-------------LDLKETAIEELPSSIGNLSRLVDL 538
           + L      N +R+  +    +              L         LPSSI N   LV++
Sbjct: 541 ENLKYLKIYNHRRYKSLDSRTQGNPNEILQPYKLRLLQWDAYPYTTLPSSI-NTDCLVEV 599

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
            L N       S     L  L+RLNL+G + L++LP ++     LE L L       +IP
Sbjct: 600 ILCNSKLTTLWSGSPPRLSHLKRLNLTGSMYLKELP-DLKEAVYLEELMLEGCISLTRIP 658

Query: 598 SSMKQLSKLSDLRLQNCKRLQSL 620
            S+  L +L  L L NC  L++L
Sbjct: 659 ESICSLPRLQKLDLSNCDGLKNL 681



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 26/158 (16%)

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS----------SRLCNLKSL-- 559
           +E L+L       LPSS+ +L++L  + L NC  L+++           S   NL +L  
Sbjct: 826 LEKLNLSGNFFRGLPSSMTHLTKLKHVRLCNCRRLEALPQLYQLETLTLSDCTNLHTLVS 885

Query: 560 -------------RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                          L L  C  +E L +++     L YL+++  DFE +P+S+K LS L
Sbjct: 886 ISQAEQDHGKYNLLELRLDNCKHVETLSDQLRFFTKLTYLDISRHDFETVPTSIKDLSSL 945

Query: 607 SDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
             L L  C +L+SL ELP     +++  C SL+T S S
Sbjct: 946 ITLCLNYCMKLKSLSELPLSIKHLYSHGCMSLETFSLS 983



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           L  LNL   L +E++P++I +++ LE LNL+   F  +PSSM  L+KL  +RL NC+RL+
Sbjct: 803 LMELNLIN-LNIEEIPDDIHHMQVLEKLNLSGNFFRGLPSSMTHLTKLKHVRLCNCRRLE 861

Query: 619 SLPELPCGSSIHARHCTSLKTL 640
           +LP+L    ++    CT+L TL
Sbjct: 862 ALPQLYQLETLTLSDCTNLHTL 883


>gi|227438199|gb|ACP30589.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1104

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 217/683 (31%), Positives = 328/683 (48%), Gaps = 93/683 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K+DVF+SFRG D R  FV HL  +L    I TF DD+ L  G+ I+  L  AI  S+ ++
Sbjct: 15  KYDVFISFRGPDTRKIFVGHLYGSLSIRGIFTFKDDRRLEPGDSITDELCQAIRTSRFAV 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSL----------- 122
           V+ S+ YA+S WCL+EL  I+E        V P+FY V PSD  +   L           
Sbjct: 75  VVISKNYATSSWCLDELQLIMELVENKEIEVFPIFYEVKPSDVRHHQLLESFSLRMTEKV 134

Query: 123 -GWM-GIFDIP----------TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKE 170
            GW   + DI           + ++ +IE  V +IS +L  + P   +D +VG+ + +K 
Sbjct: 135 PGWKKALEDIANRKGMESSKFSDDATMIEEIVQNISSRLLSMLPIRFRD-VVGMRAHMKV 193

Query: 171 IESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE-GSYFMQNIRDESEKVGG 228
           +   L +    +   +GI G GGIGKTTIA  +Y      F    YFM+N+     + G 
Sbjct: 194 LSPLLDMDSKDDARIIGIVGTGGIGKTTIAKYLYETHKLGFSPHHYFMENVAKLCREHGL 253

Query: 229 L-------------ANIHLNFERR-------RLSRMKVLIVFYDLTDLKQIDLLIGRLDG 268
           L              N+ L            RL   KV +VF D+ D++Q+D L   +  
Sbjct: 254 LHLQNQLLSSIFREKNVMLESVEHGRQQLEFRLRNAKVFLVFDDVDDVRQLDALAKEVQW 313

Query: 269 FVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF-GQNHPAAGFLE 327
           F PGSR++ITTRD  LL +        V++V+ L  + +L LF + AF G   P++ + +
Sbjct: 314 FAPGSRIVITTRDKSLLNS------CEVYDVEYLDDDKALLLFQQIAFKGGQPPSSVYSD 367

Query: 328 LSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDE 387
            S+   K A G+PLA++ LGS L+G SE EW+ A+   ++ P+ +I ++L +SY+ LD+ 
Sbjct: 368 FSSRASKLAQGLPLAVKALGSSLRGKSEMEWDKALRSFEKTPYDNIPRILNISYESLDEL 427

Query: 388 EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQE 446
            +  FL  AC F G     +++ + +     + GI  L  KSL+ +S N +I MH LL++
Sbjct: 428 SKTAFLHVACLFNGE----LVSRVKSLLHRGEDGIRVLAEKSLIDLSTNGRIAMHHLLEK 483

Query: 447 MGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE-NTSLPTGINLD--------------SL 491
           MG    R ES  D   +  LW   DI ++ ++  T+   GI LD               +
Sbjct: 484 MGR---RNESGNDLSLQPILWQWYDICRLADKAGTTRTEGIVLDVSERPNHIDWKVFMQM 540

Query: 492 KELYLGGCSNLKRFPEISCNIED-------------LDLKETAIEELPSSIGNLSRLVDL 538
           + L      N +R+  +    +              L         LPSSI N   LV++
Sbjct: 541 ENLKYLKIYNHRRYKSLDSRTQGNPNEILQPYKLRLLQWDAYPYTTLPSSI-NTDCLVEV 599

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIP 597
            L N       S     L  L+RLNL+G + L++LP ++     LE L L       +IP
Sbjct: 600 ILCNSKLTTLWSGSPPRLSHLKRLNLTGSMYLKELP-DLKEAVYLEELMLEGCISLTRIP 658

Query: 598 SSMKQLSKLSDLRLQNCKRLQSL 620
            S+  L +L  L L NC  L++L
Sbjct: 659 ESICSLPRLQKLDLSNCDGLKNL 681



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 26/158 (16%)

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS----------SRLCNLKSL-- 559
           +E L+L       LPSS+ +L++L  + L NC  L+++           S   NL +L  
Sbjct: 826 LEKLNLSGNFFRGLPSSMTHLTKLKHVRLCNCRRLEALPQLYQLETLTLSDCTNLHTLVS 885

Query: 560 -------------RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                          L L  C  +E L +++     L YL+++  DFE +P+S+K LS L
Sbjct: 886 ISQAEQDHGKYNLLELRLDNCKHVETLSDQLRFFTKLTYLDISRHDFETVPTSIKDLSSL 945

Query: 607 SDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
             L L  C +L+SL ELP     +++  C SL+T S S
Sbjct: 946 ITLCLNYCMKLKSLSELPLSIKHLYSHGCMSLETFSLS 983



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           L  LNL   L +E++P++I +++ LE LNL+   F  +PSSM  L+KL  +RL NC+RL+
Sbjct: 803 LMELNLIN-LNIEEIPDDIHHMQVLEKLNLSGNFFRGLPSSMTHLTKLKHVRLCNCRRLE 861

Query: 619 SLPELPCGSSIHARHCTSLKTL 640
           +LP+L    ++    CT+L TL
Sbjct: 862 ALPQLYQLETLTLSDCTNLHTL 883


>gi|296086817|emb|CBI32966.3| unnamed protein product [Vitis vinifera]
          Length = 1313

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 226/705 (32%), Positives = 322/705 (45%), Gaps = 149/705 (21%)

Query: 94  LESKNKYGQIVVPVFYLVDPSD------------AGYCPSLGW---MGIFDIPTSESV-- 136
           +E +   G  V P+FY VDPS             AGY     W   +G +    +E+   
Sbjct: 1   MECQKDLGHAVFPIFYHVDPSHVRKQEGSFGAAFAGY--EANWKDKVGSWRTALTEAANL 58

Query: 137 ----LIEGNVNDISKKLSD-LFPS------DNKDQLVGVESIIKEIESQLLSGSTEFNTV 185
               L +G   D  K++++ +F        D    LVG++S +KE+   L   S++   V
Sbjct: 59  AGWHLQDGYETDYIKEITNNIFHRLNCKRFDVGANLVGIDSRVKEVSLLLHMESSDVCIV 118

Query: 186 GIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNF-------ER 238
           GI+G+GGIGKTTIA  IY+ +S  FE   F++NIR  S    GL ++           ER
Sbjct: 119 GIYGVGGIGKTTIAKFIYNKLSCEFEYMSFLENIRGIS-NTKGLTHLQNQLLGDIREEER 177

Query: 239 RR---------------LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQ 283
            +               LS   V IV  D+ +  Q+  L+        GSRVIITTR+  
Sbjct: 178 SQNINIVDQGASMIETILSSKSVFIVLDDVDNRNQLKALLRHRGWLGKGSRVIITTRNKH 237

Query: 284 LLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLAL 343
           LL       V  ++EVK L+  ++  LFS +AF QN P + F+ LS  ++ Y  G+PLAL
Sbjct: 238 LLIEQE---VDDLYEVKGLNTEEACELFSLHAFKQNLPKSDFINLSYRMVYYCQGLPLAL 294

Query: 344 QVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGND 403
           +VLGS L  M+  +WES ++KL + P  +I  VLK SYDGLD  E++I LD ACF KG  
Sbjct: 295 EVLGSLLFNMTIPQWESQLHKLAKEPMAEIHNVLKSSYDGLDRTEKDILLDVACFLKGEK 354

Query: 404 QYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGK 462
           +  V+  LDAC   A IGI  L  K L+T+  N+KI MHDL+Q+M  EIVR+   K+P K
Sbjct: 355 RDSVLRILDAC---AGIGIQNLKDKCLITLPYNHKIDMHDLIQQMCWEIVRENFPKEPNK 411

Query: 463 RSRLWHPEDIYQVLNENTSLP--TGINLD--------------------------SLKEL 494
            SRLW   DI + L  +  +     I+LD                          S   +
Sbjct: 412 WSRLWDSHDIERALTTSEGIKGVETIDLDLSKLKRVHFNSNVFSKMTSLRLLRVHSYVNI 471

Query: 495 YLG---------------------------GCSNLKRFPEISCNIE---DLDLKETAIEE 524
           +LG                            CS   +F EI  N+    +  LKE AI+E
Sbjct: 472 FLGCYDEMKEEEEVDPYYEKIIDSAKKTASKCSRFGKFSEIQGNMRCPWEPYLKEIAIKE 531

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLR----------------------RL 562
            P+SI N     DLD    S L+       N++SLR                       L
Sbjct: 532 HPTSIENSRSFWDLDPCGHSNLEKFPGIQGNMRSLRLLYLSKTAIKELPGSIDLESVESL 591

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +LS C K +K PE   N++SL  L+L     +++P  +     L  L L  C + +  P 
Sbjct: 592 DLSYCSKFKKFPENGANMKSLRELDLTHTAIKELPIGISNWESLRTLDLSKCSKFEKFPA 651

Query: 623 LPCGSSIHARHC----TSLKTLSNSSTLLTRSSKHWDIFNFSNCS 663
           +  G+  + +      T++K   +S   L    K  +I N S+CS
Sbjct: 652 IQ-GNMRNLKELLLNNTAIKCFPDSIGYL----KSLEILNVSDCS 691



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 30/183 (16%)

Query: 470 EDIYQVLNENT---SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAI 522
           +++ Q+L +NT    LP GI  L+SL+ L L  CS  ++FPE   N++ L    L  TAI
Sbjct: 704 KNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSKFEKFPEKGGNMKSLGMLYLTNTAI 763

Query: 523 EELPSSIGNLSRLVDLDLTNCS-----------------------GLKSVSSRLCNLKSL 559
           ++LP+SIG+L  LV+LDL+NCS                        +K +   + +L+SL
Sbjct: 764 KDLPNSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPDSIGSLESL 823

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
             L+LS C K EK PE+ GN++SL  L L     + +P S+  L  L +L L NC + + 
Sbjct: 824 VELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVELDLSNCSKFEK 883

Query: 620 LPE 622
            PE
Sbjct: 884 FPE 886



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 109/214 (50%), Gaps = 37/214 (17%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  I +L+SL EL L  CS  ++FPE   N++ L    L  TAI++LP SIG+L  LV+
Sbjct: 766 LPNSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPDSIGSLESLVE 825

Query: 538 LDLTNCS-----------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
           LDL+NCS                        +K +   + +L+SL  L+LS C K EK P
Sbjct: 826 LDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVELDLSNCSKFEKFP 885

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIH 630
           E+ GN++ L  L L     + +P S+  L  L DL L NC + +  PEL        +++
Sbjct: 886 EKGGNMKRLGVLYLTNTAIKDLPDSIGSLD-LVDLDLSNCSQFEKFPELKRSMLELRTLN 944

Query: 631 ARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
            R  T++K L +S   +   S  WD+ + S C N
Sbjct: 945 LRR-TAIKELPSS---IDNVSGLWDL-DISECKN 973



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 26/167 (15%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP  I +L+SL EL L  CS  ++FPE   N++ L    L  TAI++LP SIG+L  LV+
Sbjct: 813 LPDSIGSLESLVELDLSNCSKFEKFPEKGGNMKSLVVLRLMNTAIKDLPDSIGSLESLVE 872

Query: 538 LDLTNCSGLKSVSSRLCNLK----------------------SLRRLNLSGCLKLEKLPE 575
           LDL+NCS  +    +  N+K                       L  L+LS C + EK PE
Sbjct: 873 LDLSNCSKFEKFPEKGGNMKRLGVLYLTNTAIKDLPDSIGSLDLVDLDLSNCSQFEKFPE 932

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
              ++  L  LNL     +++PSS+  +S L DL +  CK L+SLP+
Sbjct: 933 LKRSMLELRTLNLRRTAIKELPSSIDNVSGLWDLDISECKNLRSLPD 979



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 26/167 (15%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP  I+L+S++ L L  CS  K+FPE   N++   +LDL  TAI+ELP  I N   L  L
Sbjct: 579 LPGSIDLESVESLDLSYCSKFKKFPENGANMKSLRELDLTHTAIKELPIGISNWESLRTL 638

Query: 539 DLTNCS-----------------------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           DL+ CS                        +K     +  LKSL  LN+S C K E  PE
Sbjct: 639 DLSKCSKFEKFPAIQGNMRNLKELLLNNTAIKCFPDSIGYLKSLEILNVSDCSKFENFPE 698

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           + GN+++L+ L L     + +P  + +L  L  L L +C + +  PE
Sbjct: 699 KGGNMKNLKQLLLKNTPIKDLPDGIGELESLEILDLSDCSKFEKFPE 745



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 30/182 (16%)

Query: 471 DIYQVLNENTSL---PTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIE 523
           ++ ++L  NT++   P  I  L SL+ L +  CS  + FPE   N+++L    LK T I+
Sbjct: 658 NLKELLLNNTAIKCFPDSIGYLKSLEILNVSDCSKFENFPEKGGNMKNLKQLLLKNTPIK 717

Query: 524 ELPSSIGNLSRLVDLDLTNCS-----------------------GLKSVSSRLCNLKSLR 560
           +LP  IG L  L  LDL++CS                        +K + + + +L+SL 
Sbjct: 718 DLPDGIGELESLEILDLSDCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPNSIGSLESLV 777

Query: 561 RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
            L+LS C K EK PE+ GN++SL  L L     + +P S+  L  L +L L NC + +  
Sbjct: 778 ELDLSNCSKFEKFPEKGGNMKSLGMLYLTNTAIKDLPDSIGSLESLVELDLSNCSKFEKF 837

Query: 621 PE 622
           PE
Sbjct: 838 PE 839



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 76/164 (46%), Gaps = 28/164 (17%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKETAIEELPSSIGNLSRLVDL 538
            LP  I    L +L L  CS  ++FPE+      +  L+L+ TAI+ELPSSI N+S L DL
Sbjct: 907  LPDSIGSLDLVDLDLSNCSQFEKFPELKRSMLELRTLNLRRTAIKELPSSIDNVSGLWDL 966

Query: 539  DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            D++ C  L+S+   +  L+ L  L L GC  L                      +E + S
Sbjct: 967  DISECKNLRSLPDDISRLEFLESLILGGCSNL----------------------WEGLIS 1004

Query: 599  SMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLS 641
            +  QL  L  L     K  +   ELP     I A HCTS + LS
Sbjct: 1005 N--QLRNLGKLNTSQWKMAEKTLELPSSLERIDAHHCTSKEDLS 1046


>gi|297805242|ref|XP_002870505.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316341|gb|EFH46764.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1221

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 214/708 (30%), Positives = 325/708 (45%), Gaps = 127/708 (17%)

Query: 44  IETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQI 103
           I++FID+ + R   I P L  AI GSKI+IV+ S  YASS WCLNEL++I+  +   GQI
Sbjct: 10  IDSFIDNDIERTKSIGPELIEAIRGSKIAIVLLSRNYASSSWCLNELMEIMNCREDLGQI 69

Query: 104 VVPVFYLVDPSDAGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVG 163
           V+ +FY VDP+D       G  G     T +  +IE    D+S  L++  PS + D  +G
Sbjct: 70  VMTIFYDVDPTDVK--KQTGDFGKAFKKTCKGAMIEKIATDVSNVLNNATPSRDFDAFIG 127

Query: 164 VESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR--- 220
           +   I  +   L     E   VGIWG  GIGKT+IA ++++ ISS F+ S  M NI+   
Sbjct: 128 MGVHIANLGLLLRLDLDEVRMVGIWGPSGIGKTSIARSMFNQISSSFQLSTIMVNIKGCY 187

Query: 221 -----DESEKVGGLAN--------------IHLNFERRRLSRMKVLIVFYDLTDLKQIDL 261
                DE      L N               HL   + RL   KV +V  D+  L Q+ +
Sbjct: 188 PNPCLDEYRAQLQLQNQMLSQIINQKDIKISHLGVAQERLKDKKVFLVLDDVDRLGQL-V 246

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
            +  ++ F  GSR+II T D+++L N  G  + H+++V   S ++++ +F   AFGQ  P
Sbjct: 247 ALANIEWFGRGSRIIIITEDLRVL-NAYG--INHIYKVDFPSIDEAIEIFCMYAFGQKQP 303

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
             GF                        L+GMS+ EW+  + +LK     +I+ +LK  Y
Sbjct: 304 YHGF-----------------------ALRGMSKYEWKITLPRLKTCLDGEIESILKFGY 340

Query: 382 DGLDDEEQNIFLDTACFFKGNDQY----LVMNFLDACRFSAKIGISRLVGKSLV--TISN 435
           D L DE++ +FL  ACFF     Y    L+ N+LD  +     G+  L  KSL+   +  
Sbjct: 341 DVLCDEDKELFLYIACFFNSGPIYKLEELLKNYLDVGK-----GLRILAEKSLIHTLVGA 395

Query: 436 NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTS---LPTGINLD--- 489
             + MHDLL + G EI R++     GK   L    DI +VL+++T+      GINLD   
Sbjct: 396 GFVKMHDLLVQFGKEISRKQFNHGFGKCQILVDARDICEVLSDDTTDGRRIIGINLDLSQ 455

Query: 490 -----SLKELYLGGCSNLKRF---------PE-------ISCN----------------- 511
                ++ E  +   SNL+           P+       ++C                  
Sbjct: 456 IEENFNISEKAVKKLSNLRFLNIYSSDLPHPDRLHTMQGLNCQYFRKLISLRWMHFQKTS 515

Query: 512 ---------IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRL 562
                    + +L + ++ +++L      L  +  + L+N   LK +   L    +L  L
Sbjct: 516 LPSTFNSEFLVELTMHDSKLQKLWEGTKPLRNIKWMVLSNSKNLKELPD-LSTATNLETL 574

Query: 563 NLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            L  C  L +LP  IG L +L+YL L       ++PS  K ++ L DL L+ C  L  +P
Sbjct: 575 ILENCSSLMELPSSIGKLSNLDYLCLGGCSSLLELPSFTKNVTGLVDLDLRGCSSLVEIP 634

Query: 622 ELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSN-----CSN 664
               G +I+ R    +  LS  S+L+   S   +  N  N     CSN
Sbjct: 635 S-SIGHAINLR----ILDLSKCSSLVGLPSFVGNAINLRNVYLKGCSN 677



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 105/215 (48%), Gaps = 36/215 (16%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKE-TAIEELPSSIGNLSRLV 536
           LP+ I  L +L  L LGGCS+L   P  + N+    DLDL+  +++ E+PSSIG+   L 
Sbjct: 585 LPSSIGKLSNLDYLCLGGCSSLLELPSFTKNVTGLVDLDLRGCSSLVEIPSSIGHAINLR 644

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE------ 590
            LDL+ CS L  + S + N  +LR + L GC  L +LP  I +L +LE L+L+       
Sbjct: 645 ILDLSKCSSLVGLPSFVGNAINLRNVYLKGCSNLVELPSSIVDLINLEKLDLSGCSSLVE 704

Query: 591 ------------------KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA- 631
                                 K+PS +   +KL  L L NC  L  LP +   +++   
Sbjct: 705 LPCIRNAVNLQMLDLSDCSSLVKLPSFVGNATKLEKLNLTNCSNLLELPSIDNATNLQEL 764

Query: 632 --RHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
              +C+ L  L   STL  R++ +  + N  NCSN
Sbjct: 765 LLENCSRLMKL--PSTL--RNAINLQLINLKNCSN 795



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 82/163 (50%), Gaps = 29/163 (17%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LP  INL+SLK L L  C+ LK FPEIS NI  L+L  T IEE+P SI +  R   LD+ 
Sbjct: 905  LPININLESLKVLDLIFCTRLKIFPEISTNIVYLNLVGTTIEEVPLSIRSWPR---LDIF 961

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
              S  ++++     L  +  L+LSG                         D +++ + +K
Sbjct: 962  CMSYFENLNEFPHALDIITCLHLSG-------------------------DIQEVATWVK 996

Query: 602  QLSKLSDLRLQNCKRLQSLPELP-CGSSIHARHCTSLKTLSNS 643
             +S+L  + L  CKRL SLP+LP   S +   +C SL+ L  S
Sbjct: 997  GISRLDQILLYGCKRLVSLPQLPDILSDLDTENCASLEKLDCS 1039



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 98/201 (48%), Gaps = 23/201 (11%)

Query: 476 LNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDL----KETAIEELPSSIGN 531
           L E   L T  NL++L    L  CS+L   P     + +LD       +++ ELPS   N
Sbjct: 559 LKELPDLSTATNLETL---ILENCSSLMELPSSIGKLSNLDYLCLGGCSSLLELPSFTKN 615

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNL-AE 590
           ++ LVDLDL  CS L  + S + +  +LR L+LS C  L  LP  +GN  +L  + L   
Sbjct: 616 VTGLVDLDLRGCSSLVEIPSSIGHAINLRILDLSKCSSLVGLPSFVGNAINLRNVYLKGC 675

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKT--LSNSSTLLT 648
            +  ++PSS+  L  L  L L  C    SL ELPC      R+  +L+   LS+ S+L+ 
Sbjct: 676 SNLVELPSSIVDLINLEKLDLSGC---SSLVELPC-----IRNAVNLQMLDLSDCSSLVK 727

Query: 649 RSS-----KHWDIFNFSNCSN 664
             S        +  N +NCSN
Sbjct: 728 LPSFVGNATKLEKLNLTNCSN 748



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 27/215 (12%)

Query: 471 DIYQVLNENTS----LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE----TA 521
           ++ ++L EN S    LP+ + N  +L+ + L  CSN+ + P I  N+ +L+L +    ++
Sbjct: 760 NLQELLLENCSRLMKLPSTLRNAINLQLINLKNCSNVVKIPAIE-NVTNLNLLDLSGCSS 818

Query: 522 IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
           + E+P SIG ++ L  L L  CS L  + S + N+ SL+ LNL  C  L  LP  IGNL 
Sbjct: 819 LVEIPPSIGTVTSLHKLYLNRCSSLVELPSSIGNITSLQELNLQDCSNLLALPFSIGNLH 878

Query: 582 SLEYLNLAEKDF------------EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI 629
            L+ L+L+   F            E +P ++  L  L  L L  C RL+  PE+    S 
Sbjct: 879 KLQELHLSFFFFVKQLHLSRCSKLEVLPINI-NLESLKVLDLIFCTRLKIFPEI----ST 933

Query: 630 HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           +  +   + T      L  RS    DIF  S   N
Sbjct: 934 NIVYLNLVGTTIEEVPLSIRSWPRLDIFCMSYFEN 968



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 92/192 (47%), Gaps = 53/192 (27%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKE-TAIEELPSSIGNLSRLVD 537
           LP+ I +L +L++L L GCS+L   P I  + N++ LDL + +++ +LPS +GN ++L  
Sbjct: 681 LPSSIVDLINLEKLDLSGCSSLVELPCIRNAVNLQMLDLSDCSSLVKLPSFVGNATKLEK 740

Query: 538 LD-----------------------LTNCSGLKSVSSRL-------------C------- 554
           L+                       L NCS L  + S L             C       
Sbjct: 741 LNLTNCSNLLELPSIDNATNLQELLLENCSRLMKLPSTLRNAINLQLINLKNCSNVVKIP 800

Query: 555 ---NLKSLRRLNLSGCLKLEKLPEEIGNLESLE--YLNLAEKDFEKIPSSMKQLSKLSDL 609
              N+ +L  L+LSGC  L ++P  IG + SL   YLN      E +PSS+  ++ L +L
Sbjct: 801 AIENVTNLNLLDLSGCSSLVEIPPSIGTVTSLHKLYLNRCSSLVE-LPSSIGNITSLQEL 859

Query: 610 RLQNCKRLQSLP 621
            LQ+C  L +LP
Sbjct: 860 NLQDCSNLLALP 871


>gi|9858478|gb|AAG01052.1|AF175395_1 resistance protein MG23 [Glycine max]
          Length = 435

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 168/446 (37%), Positives = 245/446 (54%), Gaps = 68/446 (15%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEIS 59
           MA  SSS        +DVFLSFRG+D RH F  +L   L    I+TFIDD+ L +G+EI+
Sbjct: 1   MAVRSSS--------YDVFLSFRGEDTRHGFTGNLYNVLRERGIDTFIDDEELQKGHEIT 52

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGY 118
            +L  AIE SKI I++ SE YASS +CLNEL  IL  +K K  + ++PVFY VDPSD  Y
Sbjct: 53  KALEEAIEKSKIFIIVLSENYASSSFCLNELTHILNFTKGKSDRSILPVFYKVDPSDVRY 112

Query: 119 -----------------CPSLGWMGIFDIPTSESVLIEGN---------VNDISKKLSDL 152
                               +  + I+ +   +     G+           D  K++ + 
Sbjct: 113 HRGSFGEALANHEKKLKSNYMEKLQIWKMALQQVSNFSGHHFQPDGDKYEYDFIKEIVES 172

Query: 153 FPSD-NK------DQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYS 204
            PS  N+      D LVG++S +  ++S L  G+ +  + VGI G+GG+GKTT+A A+Y+
Sbjct: 173 VPSKFNRNLLYVSDVLVGLKSPVLAVKSLLDVGADDVVHMVGIHGLGGVGKTTLAVAVYN 232

Query: 205 NISSHFEGSYFMQNIRDESEKVG--GLANIHL------------------NFERRRLSRM 244
           +I+ HFE   F++N+R+ S K G   L NI L                  +  +R+L   
Sbjct: 233 SIACHFEACCFLENVRETSNKKGLESLQNILLSKTVGDMKIEVTNSREGTDIIKRKLKEK 292

Query: 245 KVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
           KVL+V  D+ + +Q+  +I   D F  GSRVIITTRD QLL  H   R    ++V+EL+ 
Sbjct: 293 KVLLVLDDVNEHEQLQAIIDSPDWFGRGSRVIITTRDEQLLVLHNVKRT---YKVRELNE 349

Query: 305 NDSLTLFSRNAFG-QNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVN 363
             +L L ++ AFG +      + ++ N  + YA+G+PLAL+V+GS L G S EEWES ++
Sbjct: 350 KHALQLLTQKAFGLEKKVDPSYHDILNRAVTYASGLPLALKVIGSNLFGKSIEEWESVLD 409

Query: 364 KLKRMPHMDIQKVLKVSYDGLDDEEQ 389
             +R P   I   LKVSYD L+++E+
Sbjct: 410 GYERSPDKSIYMTLKVSYDALNEDEK 435


>gi|357469491|ref|XP_003605030.1| NBS-containing resistance-like protein [Medicago truncatula]
 gi|355506085|gb|AES87227.1| NBS-containing resistance-like protein [Medicago truncatula]
          Length = 1391

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 186/557 (33%), Positives = 279/557 (50%), Gaps = 73/557 (13%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTE-FNTVGIWGIGG 192
           E   IE  V +IS KL  + P   K  LVG++S  ++++S + + S +    + I+G GG
Sbjct: 190 EYEFIEKIVKEISAKLPPI-PLQIK-HLVGLDSRFEQVKSLIDTNSDDAVCMLEIYGGGG 247

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDES-EKVGGLANIH------LNFERR------ 239
           IGKTT A  IYS IS  FE + F+ N+R++S E   GL ++       +  E +      
Sbjct: 248 IGKTTFAWNIYSKISHRFEATSFLANVREKSNESTRGLEDLQRTLLSEMGVETQTMIGST 307

Query: 240 ---------RLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRG 290
                    +LS  +VL++  D+  +KQ++ L G  D F  GS VI+TTRD+ +L  H+ 
Sbjct: 308 STGSSVIKCKLSNRRVLLILDDVDSVKQLESLAGGQDWFGSGSIVIVTTRDIDVLHKHKH 367

Query: 291 SRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL 350
                 ++ +EL++++S  LF   AF  + P   F ++S+  I YA G+PLAL+ +GS L
Sbjct: 368 DIKIKTYKFEELNHHESTELFCWYAFNMSRPVENFEKISSQAISYAKGIPLALKAIGSNL 427

Query: 351 KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF 410
           KG S EEW+  + + +++P  +IQ VL++SY+GL D EQ  FLD ACFFKG     V   
Sbjct: 428 KGKSIEEWDIELQRYRKVPDAEIQGVLEISYNGLSDLEQKAFLDIACFFKGERWDYVKRI 487

Query: 411 LDACRFSAKIGISRLVGKSLVTISNNK-ITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
            +AC F   I +   V K L+T+  N  I MHDL+Q+MG EIVR+ES  +PG+RSRLW  
Sbjct: 488 QEACDFFPVIRV--FVSKCLLTVDENGCIEMHDLIQDMGREIVRKESTSNPGERSRLWSH 545

Query: 470 EDIYQVLNENTSLPT--GINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPS 527
            D+  VL  N    T  GI L   K+  +   +    F ++  N+  L ++ T     PS
Sbjct: 546 HDVLGVLKGNLGSTTVEGIMLHPPKQEKVDHWA-YNAFQKMK-NLRILIVRNTLFSFGPS 603

Query: 528 SIGNLSRLVDL-------------------------------------DLT--NCSGLKS 548
            + N  RL+D                                      DLT  N S  +S
Sbjct: 604 YLPNSLRLLDWKWYPSKNFPPDFYPYRMVDFKLPHSSMILKNSFRIFEDLTFINLSHSQS 663

Query: 549 VSS--RLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
           ++    L   K+LR L +  C KL +  +  G L +L YL+ +     K       L  L
Sbjct: 664 ITQIPNLSGAKNLRVLTVDKCHKLVRFEKSNGFLPNLVYLSASGCSELKSFVPKMYLPSL 723

Query: 607 SDLRLQNCKRLQSLPEL 623
            +L    CK+ +  P++
Sbjct: 724 QELSFNFCKKFKHFPQV 740



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 2/104 (1%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           HD+FLSFRG   R++F  HL  +L R  I  F DD+ +N G+EI  SL  AIE S+ISIV
Sbjct: 10  HDIFLSFRG-GTRYSFTDHLYHSLLRHGINVFRDDQNINIGDEIGTSLLKAIEASRISIV 68

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGY 118
           +    YASS WCL+ELVKI++  +K  + V  +FY ++PSD  +
Sbjct: 69  VLCRDYASSTWCLDELVKIVDCYDKNRKSVFVIFYKIEPSDVRF 112



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 84/197 (42%), Gaps = 36/197 (18%)

Query: 477 NENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLS 533
           +E  S    + L SL+EL    C   K FP++   ++    + +  TAI+E P SIGNL 
Sbjct: 709 SELKSFVPKMYLPSLQELSFNFCKKFKHFPQVMQKMDKPLKIHMISTAIKEFPKSIGNLK 768

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGC-------------------------- 567
            L  +D++ C GL  +SS    L  L  L + GC                          
Sbjct: 769 GLEYMDMSICKGLTELSSSFLLLPKLVTLKIDGCSQLGISFRRFKERHSVANGYPNVETL 828

Query: 568 ------LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                 L  E +   I N   LE L ++   F  +P+ +++   L +L +  C+ L  +P
Sbjct: 829 HFSEANLSYEDVNAIIENFPKLEDLKVSHNGFVALPNYIRRSLHLKNLDVSFCRNLTEIP 888

Query: 622 ELPCG-SSIHARHCTSL 637
           ELP     I ARHC SL
Sbjct: 889 ELPSSVQKIDARHCQSL 905


>gi|238908352|emb|CAZ40338.1| putative disease resistance protein [Raphanus sativus]
          Length = 2100

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 198/667 (29%), Positives = 310/667 (46%), Gaps = 120/667 (17%)

Query: 83   SRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------------GYCPSLGW 124
            S WCL+EL+ IL+ K + GQIV+ +FY VDPSD                          W
Sbjct: 1143 SLWCLDELLGILKCKEEMGQIVMTIFYGVDPSDVRKQTGDFGKVFKETCRRKTEEERRRW 1202

Query: 125  -MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIES 173
               + D+             ES +IE    D+S KL+     D +D +VG+E+ + E+ S
Sbjct: 1203 SQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATISRDFED-MVGIEAHLDEMNS 1261

Query: 174  QL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE----SEKVG- 227
             L L        VGI G  GIGKTTIA A++S +SS F+ + FM+N+R      +++ G 
Sbjct: 1262 LLHLDDEDGAMFVGICGPAGIGKTTIARALHSRLSSTFQHTCFMENLRGSCNSGTDEYGL 1321

Query: 228  ----------------GLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVP 271
                            G+   HL   + RL  +KVLIV  D+ DL+Q++ L    + F  
Sbjct: 1322 KLRLQELLLSKIFNQNGVKLFHLGAIKERLCDLKVLIVLDDVDDLQQLEALADDTNWFGD 1381

Query: 272  GSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNI 331
            GSR+I+TT D ++L+ H    + + + V   +  D+  +F R AF Q     GF +L + 
Sbjct: 1382 GSRIIVTTEDQEILEQHG---ISNTYRVDFPTQVDARQIFCRFAFRQLSAPHGFEKLVDR 1438

Query: 332  VIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNI 391
            VIK  + +PL L+V+GS L+    ++WE  + +L+      I  VL+V Y+ L  ++Q +
Sbjct: 1439 VIKLCSNLPLGLRVMGSSLRRKKVDDWEGILQRLENSFDQKIDAVLRVGYNSLHKDDQFL 1498

Query: 392  FLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGE 450
            FL  ACFF   D   V   L       ++G+  LV KSL+ IS    I MH LLQ++G E
Sbjct: 1499 FLLIACFFNYKDDDHVKAMLVDSNLDVRLGLKNLVYKSLIQISAEGTIVMHKLLQQVGRE 1558

Query: 451  IVRQESIKDPGKRSRLWHPEDIYQVLN-------------ENTSLPTGINLDS-----LK 492
             V    ++DP KR  L     I  VL              + +++P G+ + +     ++
Sbjct: 1559 AVH---LQDPRKRQILIDSHQICDVLENDSDGTSVMGISFDTSTIPNGVYISAQGFRRMR 1615

Query: 493  ELYLGGCSNLKRFPEISCNI-EDLDLK-------------------------------ET 520
            +L        +R P +  ++ ED+                                   +
Sbjct: 1616 DLRFLSIYETRRDPNVRVHLPEDMSFPPLLRLLHWEVYPGKCLPHTLRPEHLVELCFVNS 1675

Query: 521  AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNL 580
             +E+L   +  L+ L  +DL+    LK V   L N  SL+RLNL+GC  L ++P  IG+L
Sbjct: 1676 MLEQLWQGVQPLTNLKKMDLSGSLSLKEVPD-LSNATSLKRLNLTGCWSLVEIPSSIGDL 1734

Query: 581  ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
              LE L +      ++  ++  L+ L  LR+  C +L  +P+LP          T++K+L
Sbjct: 1735 HKLEELEMNLCVSVQVFPTLLNLASLESLRMVGCWQLSKIPDLP----------TNIKSL 1784

Query: 641  SNSSTLL 647
                T+L
Sbjct: 1785 VVGETML 1791



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 220/741 (29%), Positives = 336/741 (45%), Gaps = 131/741 (17%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           ++ VF SF G DVR  F++HL        I  F D  + RG+ I+P+L+ AI  S+ISIV
Sbjct: 135 RYRVFTSFHGPDVRKTFLTHLRKQFNCNGISMFDDQGIERGHTIAPALTQAIRESRISIV 194

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA------------GYCPSL 122
           + ++ YASSRWCL+EL+ IL+ K + GQIV+ +FY VDPSD               C   
Sbjct: 195 VLTKHYASSRWCLDELLGILKCKEEIGQIVMTIFYGVDPSDVRKQTGDFGKVFKDTCRRK 254

Query: 123 G------W-MGIFDIPT----------SESVLIEGNVNDISKKLSDLFPSDNKDQLVGVE 165
                  W   + D+             ES +IE    D+S KL+     D +D +VG+E
Sbjct: 255 TEEERRRWSQALTDVGNIAGEHFLNWDKESEMIEKIARDVSNKLNATISRDFED-MVGIE 313

Query: 166 SIIKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR---- 220
           + + +++S L L         GI G  GIGKTTIA A++S +SS F  + FM+N+R    
Sbjct: 314 AHLDKMQSLLHLDDEDGAMFAGICGPAGIGKTTIARALHSRLSSSFHLTCFMENLRGSCN 373

Query: 221 ---DE-----------SEKVGGLANI---HLNFERRRLSRMKVLIVFYDLTDLKQIDLLI 263
              DE             K+    ++   HL    +R+   KVLI+  D+ DL+Q++ L 
Sbjct: 374 SGLDEYGLKLRLQELLLSKIFNQNDMRIYHLGAIPQRMCDQKVLIILDDVDDLQQLEALA 433

Query: 264 GRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAA 323
              + F  GSR+++TT D +LL+ H    + + + V   + +++  +F R AF ++    
Sbjct: 434 DETNWFGDGSRIVVTTEDQELLEQH---GINNTYYVDLPTDDEARKIFCRYAFRRSLTPY 490

Query: 324 GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDG 383
           GF  L     +    +P  L+V           E +    K        I  VL+V YD 
Sbjct: 491 GFETLVERTTELCGKLPFGLRV-------QFYAERKKTTGK--------IDAVLRVGYDS 535

Query: 384 LDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNN-KITMHD 442
           L + EQ +FL  A FF   D   V   L       ++G+  L  KSL  IS+  KI MH 
Sbjct: 536 LHENEQTLFLLIAIFFNYQDDGHVKTMLADTNLDVRLGLKTLAYKSLTKISSQGKIVMHK 595

Query: 443 LLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYL--GGCS 500
           LLQ++G + V+++   +P KR  L  P++I  VL E        + D ++++     G  
Sbjct: 596 LLQQVGRQAVQRQ---EPWKRRILIDPQEICDVL-EPWKRQVLTDTDEIRDVLENDSGSR 651

Query: 501 NLKRFP-EISCNIEDLDLKETAIE---------------------------ELPSSIGNL 532
           NL     ++S  + D+D+   A                             E P  +  L
Sbjct: 652 NLMGVSFDMSTILHDMDISARAFTSMRNLRFLKVYKTRCDTNVRVHLPEDMEFPPRLRLL 711

Query: 533 ----------------SRLVDLDL--TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP 574
                             LV+L L  T    L   +  L NLK   ++ L  CL L++LP
Sbjct: 712 HWEVYPRKFLPRTFCTEHLVELYLRDTELEQLWEGTQPLTNLK---KMFLGSCLYLKELP 768

Query: 575 EEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH 633
            ++    +LE L L   +   +I SS+  L KL  L +  C  LQ +P L   +S+ +  
Sbjct: 769 -DLAKATNLEKLRLDRCRSLVEIHSSVGNLHKLESLEVAFCYNLQVVPNLFNLASLESFM 827

Query: 634 ---CTSLKTLSNSSTLLTRSS 651
              C  L++L + ST +T  S
Sbjct: 828 MVGCYQLRSLPDISTTITELS 848



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 36/189 (19%)

Query: 488 LDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
           L +LK+++LG C  LK  P++  + N+E L L    ++ E+ SS+GNL +L  L++  C 
Sbjct: 750 LTNLKKMFLGSCLYLKELPDLAKATNLEKLRLDRCRSLVEIHSSVGNLHKLESLEVAFCY 809

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF----------- 593
            L+ V + L NL SL    + GC +L  LP+    +  L   +   ++F           
Sbjct: 810 NLQVVPN-LFNLASLESFMMVGCYQLRSLPDISTTITELSIPDTLLEEFTEPIRLWSHLQ 868

Query: 594 --------------------EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH-AR 632
                               E+IP  +K L +L +L +  C +L SLPELP   ++    
Sbjct: 869 RLDIYGCGENLEQVRSDIAVERIPDCIKDLQRLEELTIFCCPKLVSLPELPRSLTLLIVY 928

Query: 633 HCTSLKTLS 641
            C SL+TL+
Sbjct: 929 ECDSLETLA 937



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 49/218 (22%)

Query: 488  LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCS 544
            L +LK++ L G  +LK  P++S   +++ L+L    ++ E+PSSIG+L +L +L++  C 
Sbjct: 1687 LTNLKKMDLSGSLSLKEVPDLSNATSLKRLNLTGCWSLVEIPSSIGDLHKLEELEMNLCV 1746

Query: 545  GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL--------------------- 583
             ++ V   L NL SL  L + GC +L K+P+   N++SL                     
Sbjct: 1747 SVQ-VFPTLLNLASLESLRMVGCWQLSKIPDLPTNIKSLVVGETMLQEFPESVRLWSHLH 1805

Query: 584  ------------------EYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
                              +  +LA    E+IP  +K  + L  L +  C +L SLPELP 
Sbjct: 1806 SLNIYGSVLTVPLLETTSQEFSLAAATIERIPDWIKDFNGLRFLYIAGCTKLGSLPELPP 1865

Query: 626  G-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
                +   +C SL+T+       T      D   F NC
Sbjct: 1866 SLRKLIVDNCESLETVCFPCDTPTT-----DYLYFPNC 1898



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 16/150 (10%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P   NL SL+   + GC  L+  P+IS  I +L + +T +EE    I   S L  LD+ 
Sbjct: 814 VPNLFNLASLESFMMVGCYQLRSLPDISTTITELSIPDTLLEEFTEPIRLWSHLQRLDIY 873

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
            C           NL+ +R       + +E++P+ I +L+ LE L +      K+ S  +
Sbjct: 874 GCGE---------NLEQVR-----SDIAVERIPDCIKDLQRLEELTIF--CCPKLVSLPE 917

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIHA 631
               L+ L +  C  L++L   P GS I A
Sbjct: 918 LPRSLTLLIVYECDSLETLAPFPLGSEIEA 947


>gi|227438265|gb|ACP30622.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1459

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 222/721 (30%), Positives = 342/721 (47%), Gaps = 106/721 (14%)

Query: 1   MASSSS-SINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEIS 59
           MASSSS S   + H    VFLSFRG DVR  F+SH+   L  + I  FID+++ RG  + 
Sbjct: 1   MASSSSLSRGWLYH----VFLSFRGVDVRKGFLSHVLKELKSKGILPFIDNEIKRGESVG 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS----- 114
           P L  AI  S++++V+ S  YA S WCL+ELV+I++ + +  Q V+ +FY VDPS     
Sbjct: 57  PVLVGAIRQSRVAVVLLSRNYAYSSWCLDELVEIMKCRKEDQQKVMTIFYEVDPSHVRKQ 116

Query: 115 --DAGYC-----------PSLGW-------MGI----FDIPTSESVLIEGNVNDISKKLS 150
             D G                 W        GI    F    +E+ LI    +D++  L 
Sbjct: 117 TGDFGKAFDETCVGKTEEVKQAWKQALKEVAGIAGYDFSNCDNEADLINKVASDVAAMLG 176

Query: 151 DLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHF 210
              PS + D+ VG+  II EI+S+L+  S E   +GI G  GIGKT+ A  +Y+ +S  F
Sbjct: 177 -FTPSKDFDEFVGIARII-EIKSKLILQSEEVKVIGIVGPAGIGKTSTARVLYNQLSPCF 234

Query: 211 EGSYFMQNIRDESEKVGG-------------LANI---------HLNFERRRLSRMKVLI 248
             S F++NIR   EK  G             L+ +         HL   +  LS  KVL 
Sbjct: 235 PFSTFLENIRGNYEKPCGDNYSLKLRLHQNFLSQLLNQKDIVVGHLGVAQNMLSDKKVLA 294

Query: 249 VFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSL 308
           V  ++    Q++ +  + +   PGS VIITT DV+LLK  R   + H+++++  +  +SL
Sbjct: 295 VLDEVDSWWQLEEMAKQREWVGPGSIVIITTEDVKLLKQLRLG-IDHIYKMEFPTCYESL 353

Query: 309 TLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKR- 367
            +F + AF QN P  GF  L+  V   A  +PL L+V+GSYL+GMS + W  A+ +L+  
Sbjct: 354 EIFCQYAFDQNSPYDGFEGLAREVTWLAGNLPLGLRVMGSYLRGMSMDYWIKALPRLRNS 413

Query: 368 --MPHMDIQKVLKVSYDGLDD------------------EEQNIFLDTACFFKGNDQYLV 407
              P    + ++ + Y G  +                  +E+   +D    F   D+  V
Sbjct: 414 TAWPQAH-KSLISIDYRGYVEMHSLLQQLGREIVKKQSLKERQFLMDAKDIFDLLDENTV 472

Query: 408 MN-----FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGK 462
                   LD      +I IS+   + + ++    +   +L   + G     E ++    
Sbjct: 473 TGKVLGIMLDTSYQREEIHISKSAFEGMNSLQFLTVNSKNLCI-LEGLTCLPEKLRLLCW 531

Query: 463 RS---RLW----HPEDIYQVLNENT---SLPTGIN-LDSLKELYLGGCSNLKRFPEIS-- 509
            S   R W      E + +++  N+    L  GI  L  LK + L G   LK  P++S  
Sbjct: 532 NSCKLRFWPSKFSAEFLVELIMPNSKFEKLWEGIQPLQCLKLMNLLGSCYLKEIPDLSNA 591

Query: 510 CNIEDLDLKET-AIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
            ++E+L L    ++ E+ SSIGN ++L   +L  C  LK + S +  L +L  LNL+ C 
Sbjct: 592 TSLEELVLCGCKSLLEITSSIGNATKLKKCNLFGCLLLKELPSSISRLINLEELNLNYCW 651

Query: 569 KLEKLP-----EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
            L+ L      E++    SL+ L L     E++PSSM   S L +L +  C  L+  P +
Sbjct: 652 SLKALSVFSSLEKLSGCSSLKELRLTRTAIEEVPSSMSTWSCLYELDMSGCTNLKEFPNV 711

Query: 624 P 624
           P
Sbjct: 712 P 712



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 46/215 (21%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L EL + GC+NLK FP +  +I +LDL  T IEE+P  I  L RL  L +  C  LK +S
Sbjct: 694 LYELDMSGCTNLKEFPNVPDSIVELDLCRTGIEEVPPWIEKLFRLRKLIMNGCEKLKKIS 753

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNL----------------ESLEY--------- 585
            ++  L++L  L L    + E   E +G                   S E          
Sbjct: 754 PKVSKLENLEFLGLRKDGQDEYDDEYVGEFGLKLFEAVMKWGPDLNHSWELRSDFRVHHI 813

Query: 586 --LNLAEKDF-------------EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSI 629
             + L +K F             + IP  +  LS LS+L +  C++L++LP+LP    S+
Sbjct: 814 LPICLPKKAFTSPVSLLLRCVGLKTIPDCIGFLSGLSELDITECRKLRALPQLPAALISL 873

Query: 630 HARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
            A++C SL+++ +SS      + H D   F+NC N
Sbjct: 874 DAQNCESLESIDSSS--FQNPNIHLD---FANCFN 903



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 29/136 (21%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISC--------NIEDLDLKETAIEELPSSIGNL 532
           LP+ I+ L +L+EL L  C +LK     S         ++++L L  TAIEE+PSS+   
Sbjct: 632 LPSSISRLINLEELNLNYCWSLKALSVFSSLEKLSGCSSLKELRLTRTAIEEVPSSMSTW 691

Query: 533 SRLVDLDLTNCSGLKS--------VSSRLC------------NLKSLRRLNLSGCLKLEK 572
           S L +LD++ C+ LK         V   LC             L  LR+L ++GC KL+K
Sbjct: 692 SCLYELDMSGCTNLKEFPNVPDSIVELDLCRTGIEEVPPWIEKLFRLRKLIMNGCEKLKK 751

Query: 573 LPEEIGNLESLEYLNL 588
           +  ++  LE+LE+L L
Sbjct: 752 ISPKVSKLENLEFLGL 767



 Score = 46.6 bits (109), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 41/174 (23%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIED-LDLKET------AIEELPSSIGNLSR 534
           +P   N  SL+EL L GC +L    EI+ +I +   LK+        ++ELPSSI  L  
Sbjct: 585 IPDLSNATSLEELVLCGCKSLL---EITSSIGNATKLKKCNLFGCLLLKELPSSISRLIN 641

Query: 535 LVDLDLTNCSGLKSVS--------SRLCNLKSLR--------------------RLNLSG 566
           L +L+L  C  LK++S        S   +LK LR                     L++SG
Sbjct: 642 LEELNLNYCWSLKALSVFSSLEKLSGCSSLKELRLTRTAIEEVPSSMSTWSCLYELDMSG 701

Query: 567 CLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
           C  L++ P      +S+  L+L     E++P  +++L +L  L +  C++L+ +
Sbjct: 702 CTNLKEFPNVP---DSIVELDLCRTGIEEVPPWIEKLFRLRKLIMNGCEKLKKI 752


>gi|240255955|ref|NP_193427.4| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332658425|gb|AEE83825.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1147

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 220/664 (33%), Positives = 322/664 (48%), Gaps = 99/664 (14%)

Query: 48  IDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILES-KNK-YGQIVV 105
           +D  + R   I+  L +AI  ++ISIVIFSE YASS WCLNELV+I +  K+K   Q+V+
Sbjct: 1   MDHGIVRSCIIADELITAIREARISIVIFSENYASSTWCLNELVEIHKCHKDKDLDQMVI 60

Query: 106 PVFYLVDPS------------------DAGYCPSLGWM-GIFDIPT----------SESV 136
           PVFY VDPS                  D        W+  + DI            SE+ 
Sbjct: 61  PVFYGVDPSHVRKQIGGFGDVFKKTCEDKPEDQKQRWVKALTDISNLAGEDLRNGPSEAA 120

Query: 137 LIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFN-TVGIWGIGGIGK 195
           ++    ND+S KL  L P    D LVG+E  I+ I+ +L   S E    VGIWG  GIGK
Sbjct: 121 MVVKIANDVSNKLFPL-PKGFGD-LVGIEDHIEAIKLKLCLESKEARIMVGIWGQSGIGK 178

Query: 196 TTIASAIYSNISSHFEGSYFMQNIRDESEKVGG---------LANI---------HLNFE 237
           +TI  A++S +SS F    F+         V G         L+ I         H    
Sbjct: 179 STIGRALFSQLSSQFHHRAFITYKSTSGSDVSGMKLSWEKELLSEILGQKDIKIEHFGVV 238

Query: 238 RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVF 297
            +RL   KVLI+  D+ +L+ +  L+G+ + F  GSR+I+ T+D QLLK H    +  ++
Sbjct: 239 EQRLKHKKVLILLDDVDNLEFLRTLVGKAEWFGSGSRIIVITQDRQLLKAHE---IDLIY 295

Query: 298 EVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEE 357
           EVK  S   +L +  + AFG+  P   F EL+  V K A  +PL L VLGS LK  S+EE
Sbjct: 296 EVKLPSQGLALKMICQYAFGKYSPPDDFKELAFEVAKLAGNLPLGLSVLGSSLKRRSKEE 355

Query: 358 WESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFS 417
           W   + +L+   + DI K L+VSY  LD ++Q+IF   A  F G     + +FL     +
Sbjct: 356 WMEMLAELQNGLNRDIMKTLRVSYVRLDPKDQDIFHYIAWLFNGWKVKSIKDFLGD-GVN 414

Query: 418 AKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL 476
             I +  L  KSL+ ++ N+ I MH+LLQ++  EI R+ES  +PGKR  L + E+I  V 
Sbjct: 415 VNIRLKTLDDKSLIRLTPNDTIEMHNLLQKLATEIDREESNGNPGKRRFLENAEEILDVF 474

Query: 477 NENTSLPTGINLD--------------SLKELYLGGCSNLK-----------------RF 505
            +NT     + +D              S+ E    G  NL+                 R 
Sbjct: 475 TDNTGTEKLLGIDFSTSSDSQIDKPFISIDENSFQGMLNLQFLNIHDHYWWQPRETRLRL 534

Query: 506 PE----ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRR 561
           P     +   ++ L  +   ++ LPS+      LV+L + N S L+ + +    L SL++
Sbjct: 535 PNGLVYLPRKLKWLRWENCPLKRLPSNF-KAEYLVELRMEN-SALEKLWNGTQPLGSLKK 592

Query: 562 LNLSGCLKLEKLPE--EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQS 619
           +NL     L+++P+     NLE L+  N   +  E  PS +   S L  L L  C RL++
Sbjct: 593 MNLRNSNNLKEIPDLSLATNLEELDLCNC--EVLESFPSPLNSES-LKFLNLLLCPRLRN 649

Query: 620 LPEL 623
            PE+
Sbjct: 650 FPEI 653



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 28/139 (20%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LP  INL SL  ++L GCS+L+  P+IS +I  L+L +TAIEE+P    N SRL++L + 
Sbjct: 784 LPMDINLSSLHTVHLKGCSSLRFIPQISKSIAVLNLDDTAIEEVP-CFENFSRLMELSMR 842

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
            C             KSLRR              +I    S++ LNLA+   E++P  ++
Sbjct: 843 GC-------------KSLRRF------------PQIST--SIQELNLADTAIEQVPCFIE 875

Query: 602 QLSKLSDLRLQNCKRLQSL 620
           + S+L  L +  CK L+++
Sbjct: 876 KFSRLKVLNMSGCKMLKNI 894



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 55/86 (63%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           +P   N   L EL + GC +L+RFP+IS +I++L+L +TAIE++P  I   SRL  L+++
Sbjct: 827 VPCFENFSRLMELSMRGCKSLRRFPQISTSIQELNLADTAIEQVPCFIEKFSRLKVLNMS 886

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGC 567
            C  LK++S  +  L  L +++ + C
Sbjct: 887 GCKMLKNISPNIFRLTRLMKVDFTDC 912



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 44/186 (23%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI-------------------------------- 508
           S P+ +N +SLK L L  C  L+ FPEI                                
Sbjct: 626 SFPSPLNSESLKFLNLLLCPRLRNFPEIIMQSFIFTDEIEIEVADCLWNKNLPGLDYLDC 685

Query: 509 --SCN--------IEDLDLK-ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
              CN        +++L ++    +E+L   + +L +L  +DL+ C  +  +   L    
Sbjct: 686 LRRCNPSKFRPEHLKNLTVRGNNMLEKLWEGVQSLGKLKRVDLSECENMIEIPD-LSKAT 744

Query: 558 SLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           +L  L+LS C  L  LP  IGNL+ L  LN+ E    K+      LS L  + L+ C  L
Sbjct: 745 NLEILDLSNCKSLVMLPSTIGNLQKLYTLNMEECTGLKVLPMDINLSSLHTVHLKGCSSL 804

Query: 618 QSLPEL 623
           + +P++
Sbjct: 805 RFIPQI 810


>gi|356561824|ref|XP_003549177.1| PREDICTED: TMV resistance protein N-like [Glycine max]
 gi|27764542|gb|AAO23072.1| R 14 protein [Glycine max]
          Length = 641

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 166/443 (37%), Positives = 244/443 (55%), Gaps = 63/443 (14%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEIS 59
           MA+++ S+  I    +DVFLSFRG+D R+ F  +L  ALC + I TF D+ KL+ G+EI+
Sbjct: 1   MAATTRSLPFI----YDVFLSFRGEDTRYGFTGNLYRALCEKGIHTFFDEEKLHGGDEIT 56

Query: 60  PSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD---- 115
           P+LS AI+ S+I+I + S+ YA S +CL+ELV IL  K++ G +V+PVFY VDPSD    
Sbjct: 57  PALSKAIQESRIAITVLSQNYAFSSFCLDELVTILHCKSE-GLLVIPVFYNVDPSDLRHQ 115

Query: 116 -AGYCPSL---------------GWMGIF------------DIPTSESVLIEGNVNDISK 147
              Y  ++                W                D    E   I   V ++S+
Sbjct: 116 KGSYGEAMIKHQKRFESKMEKLQKWRMALKQVADLSGHHFKDGDAYEYKFIGSIVEEVSR 175

Query: 148 KLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNI 206
           K++        D  VG+ES + ++   L  GS +  + +GI G+ G+GKTT++ A+Y+ I
Sbjct: 176 KINRA-SLHVLDYPVGLESQVTDLMKLLDVGSDDVVHIIGIHGMRGLGKTTLSLAVYNLI 234

Query: 207 SSHFEGSYFMQNIRDESEKVG-------------GLANIHL-------NFERRRLSRMKV 246
           + HF+ S F+QN+R+ES K G             G  +I+L       +  + RL R KV
Sbjct: 235 ALHFDESCFLQNVREESNKHGLKHLQSILLLKLLGEKDINLTSWQEGASMIQHRLRRKKV 294

Query: 247 LIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYND 306
           L++  D    +Q+  ++GR D F PGSRVIITTRD  LLK H   R    +EVK L+ N 
Sbjct: 295 LLILDDADRHEQLKAIVGRPDWFGPGSRVIITTRDKHLLKYHGIERT---YEVKVLNDNA 351

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           +L L + NAF +      +  + N V+ YA+G+PLAL+V+GS+L   +  EWE AV    
Sbjct: 352 ALQLLTWNAFRREKIDPSYEHVLNRVVAYASGLPLALEVIGSHLFEKTVAEWEYAVEHYS 411

Query: 367 RMPHMDIQKVLKVSYDGLDDEEQ 389
           R+P  +I  +LKVS+D    E Q
Sbjct: 412 RIPIDEIVDILKVSFDATKQETQ 434


>gi|224127242|ref|XP_002329435.1| nbs-lrr resistance protein [Populus trichocarpa]
 gi|222870485|gb|EEF07616.1| nbs-lrr resistance protein [Populus trichocarpa]
          Length = 909

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 186/523 (35%), Positives = 277/523 (52%), Gaps = 62/523 (11%)

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           ++ S     L+G++  + ++ES L   S +   VGIWG+GGIGK+TIA A+ + + S FE
Sbjct: 1   MYSSHTMAGLLGIDVRVSKVESLLNMESPDVLIVGIWGMGGIGKSTIAEAVCNKVRSRFE 60

Query: 212 GSYFMQNIRDESE---------------KVGGLANIHLNFERRRLSRMKVLIVFYDLTDL 256
           G +F  N R +S+                  G  +   +F R RL R+KV IV  D+ + 
Sbjct: 61  GIFF-ANCRQQSDLRRRFLKRLLGQETLNTMGSLSFRDSFVRDRLRRIKVFIVLDDVDNS 119

Query: 257 KQI----DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFS 312
             +    DLL GR   F PGS+V+IT+RD Q+L N     V   ++V+ L+Y D++ LF+
Sbjct: 120 MALEEWRDLLDGRNSSFGPGSKVLITSRDKQVLSN----IVDETYKVEGLNYEDAIQLFN 175

Query: 313 RNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMD 372
             A     P      L   +  +  G PLAL+VLGS L G S EEW SA+ KL + P   
Sbjct: 176 SKALKICIPTIDQRHLIEQIAWHVRGNPLALKVLGSSLYGKSIEEWRSALKKLAQDPQ-- 233

Query: 373 IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRF--SAKIGISRLVGKSL 430
           I++ L++SYDGLD E+++IFLD A FF           LD C +  S    IS L+ K L
Sbjct: 234 IERALRISYDGLDSEQKSIFLDIAHFFNRMKPNEATRILD-CLYGRSVIFDISTLIDKCL 292

Query: 431 VTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--TSLPTGINL 488
           +T   N I MHDLLQEM   IVR ES   PG+RSRL HP D+ QVL EN  T    GI+L
Sbjct: 293 ITTFYNNIRMHDLLQEMAFNIVRAES-DFPGERSRLCHPPDVVQVLEENKGTQKIKGISL 351

Query: 489 DSL---KELYLGGCS-------NLKRFPEISCNIED-LDLKETAIEELPSSIGNL----- 532
            +    ++++L   +           F + + ++ED + L  T +E LP+ +  L     
Sbjct: 352 STFMLSRQIHLKSDAFAMMDGLRFLNFRQHTLSMEDKMHLPPTGLEYLPNKLRYLKWCGF 411

Query: 533 -----------SRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLE 581
                       RLV+L L N + L  + + + ++ +LR ++LS    L +LP ++   +
Sbjct: 412 PSKSLPPSFRTERLVELHLCN-NKLVKLWTGVQDVGNLRTIDLSDSPYLTELP-DLSMAK 469

Query: 582 SLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +L+ L LA+     ++PSS++ L KL ++ L +C  L+S P L
Sbjct: 470 NLQCLRLAKCSSLTEVPSSLQYLDKLEEIDLFSCYNLRSFPML 512



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 94/174 (54%), Gaps = 31/174 (17%)

Query: 491 LKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           L+ L L GC  + +FPEIS +IE L+LK T I+E+PSSI  L+RL DLD++ CS      
Sbjct: 559 LERLCLNGCPEITKFPEISGDIERLELKGTTIKEVPSSIQFLTRLRDLDMSGCS------ 612

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP-SSMKQLSKLSDL 609
                             KLE  PE  G ++SL  LNL++   +KIP SS K +  L  L
Sbjct: 613 ------------------KLESFPEITGPMKSLVELNLSKTGIKKIPSSSFKHMISLRRL 654

Query: 610 RLQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           +L     ++ LPELP    I   H C SL+T+   S +  RS   WD+ +F+NC
Sbjct: 655 KLDGTP-IKELPELPPSLWILTTHDCASLETV--ISIIKIRSL--WDVLDFTNC 703



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 24/141 (17%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +P+ I  L  L++L + GCS L+ FPEI+                    G +  LV+L+L
Sbjct: 593 VPSSIQFLTRLRDLDMSGCSKLESFPEIT--------------------GPMKSLVELNL 632

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
           +     K  SS   ++ SLRRL L G   +++LPE   +L  L   + A    E + S +
Sbjct: 633 SKTGIKKIPSSSFKHMISLRRLKLDGT-PIKELPELPPSLWILTTHDCAS--LETVISII 689

Query: 601 KQLSKLSDLRLQNCKRLQSLP 621
           K  S    L   NC +L   P
Sbjct: 690 KIRSLWDVLDFTNCFKLDQKP 710


>gi|356542397|ref|XP_003539653.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1376

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 223/705 (31%), Positives = 333/705 (47%), Gaps = 112/705 (15%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           +DVFLSF G    + FV  L  AL  + I  F     +   E  P++   IE SK+ IV+
Sbjct: 15  YDVFLSFSG-GTSNPFVDPLCRALRDKGISIF----RSEDGETRPAIEE-IEKSKMVIVV 68

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA-----GYCPSLGWMGIFDI 130
           F + YA S   L+ELVKI E  +   + V  +FY+V+PSD       Y  ++    +   
Sbjct: 69  FCQNYAFSTESLDELVKIREYVDNRRKQVWTIFYIVEPSDVRKQRNSYKDAMNGHEMTYG 128

Query: 131 PTSESV---------------------LIEGNVNDISKKLS-DLFPSDNK-DQLVGVESI 167
             SE V                     + E  +  I +  S  LF    + +  VG++  
Sbjct: 129 KDSEKVKAWREALTRVCDLSGIHCKDHMFEAELQKIVEAASCKLFRVPGQMNHAVGLDDH 188

Query: 168 IKEIESQL-LSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSH-FEGSYFMQNIRDESEK 225
            +++++ + +  + +   +GI+G GGIGKTT A  +Y  I  + FE + F+  +R++S++
Sbjct: 189 FEQVKAFIDVESNDKVGVLGIYGGGGIGKTTFAVYLYEKIRHYYFEAASFLIKVREQSKE 248

Query: 226 -----------------------VGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
                                  +G      L   + RL   +VL+V  D+   +Q++LL
Sbjct: 249 SKNHLEDLQNRLLSQLGVDTGTMIGSTNKGELEI-KHRLGHRRVLLVLDDVDSKEQLELL 307

Query: 263 IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            G+ D F  GSR+IITTRD  +L    G +V   +++ EL+   SL LF +NAF +  PA
Sbjct: 308 AGKHDWFGSGSRIIITTRDEAVLD--YGVKVKK-YKMTELNDRHSLELFCQNAFDKPEPA 364

Query: 323 AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
             F  +S+  I YA GVPLALQV+GS LKG S EEWE  + K +++P+  IQ VLK+S+D
Sbjct: 365 KNFESISHRAIGYAKGVPLALQVIGSNLKGRSIEEWEIELGKYRKVPNAKIQGVLKLSFD 424

Query: 383 GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITMH 441
            L + E  IFLD ACFFKG     V   L A   S K+    L  K L+ +  N  + MH
Sbjct: 425 SLPETEMGIFLDIACFFKGEKWNYVKRILKASDISFKV----LASKCLIMVDRNDCLEMH 480

Query: 442 DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPT--GINL----------- 488
           DL+Q+MG EIVR +S  +PG RSRLW  ED+ +VL +++   T  GI L           
Sbjct: 481 DLIQDMGREIVRNQSPSNPGDRSRLWSHEDVLEVLKKDSGSITIEGIMLHPPKLEVVDKW 540

Query: 489 -----DSLKEL---------YLGGCSNLKR---------FPEISC-------NIEDLDLK 518
                + +K L         +L G S+L           FP  S        NI D  L 
Sbjct: 541 TDTAFEKMKNLRILIVRNTKFLTGPSSLPNKLQLLDWIGFPSESFPPKFDPKNIVDFKLS 600

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
            +++  +         L  ++L+ C  +  +   +   K+LR L +  C KLE      G
Sbjct: 601 HSSLVSIKPPQKVFQNLTFVNLSQCHFITKIPD-MFEAKNLRVLTIDKCPKLEGFHPSAG 659

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           ++ +L YL+ +E            L  L  L    C +LQ  PE+
Sbjct: 660 HMPNLVYLSASECTMLTSFVPKMNLPYLEMLSFNFCSKLQEFPEV 704



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 38/209 (18%)

Query: 480 TSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED---LDLKETAIEELPSSIGNLSRLV 536
           TS    +NL  L+ L    CS L+ FPE+   ++    + +  TAIE+ P SI  ++ L 
Sbjct: 676 TSFVPKMNLPYLEMLSFNFCSKLQEFPEVGGKMDKPLKIHMINTAIEKFPKSICKVTGLE 735

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKL-------------------------- 570
            +D+T C  LK +SS   +L  L  L ++GC +L                          
Sbjct: 736 YVDMTTCRELKDLSS-FVSLPKLVTLKMNGCSQLAESFKMFRKSHSEANSCPSLKALYLS 794

Query: 571 ------EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELP 624
                 E L   +     LEYLN++  +FE +P  +K   +L  L L  C+ L+ +PELP
Sbjct: 795 KANLSHEDLSIILEIFPKLEYLNVSHNEFESLPDCIKGSLQLKKLNLSFCRNLKEIPELP 854

Query: 625 CG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
                + AR+C SL T S SS LL++  K
Sbjct: 855 SSIQRVDARYCQSLSTKS-SSVLLSKIYK 882


>gi|357468657|ref|XP_003604613.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
 gi|355505668|gb|AES86810.1| TIR-NBS-LRR RCT1-like resistance protein [Medicago truncatula]
          Length = 1637

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 153/353 (43%), Positives = 229/353 (64%), Gaps = 20/353 (5%)

Query: 133  SESVLIEGNVNDISKKLS--DLFPSDNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWG 189
            +ES +I+G V +I++     DLF  DN    VGVES ++++   L    S +   +G+WG
Sbjct: 1169 NESEVIKGIVENITRLFDKIDLFIVDNP---VGVESQVQDMIKLLDTHQSKDVLLIGMWG 1225

Query: 190  IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIV 249
            +GGIGK+T+A AIY+ I  +FEG  F+ NIR+  E+V G         +++ S ++VL+V
Sbjct: 1226 MGGIGKSTVAKAIYNKIGRNFEGRSFLANIREVGEQVSG---------QQKDSVIRVLLV 1276

Query: 250  FYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLT 309
              D+  L Q++ L G    F PGSR+IITTRD+ +L   R  +V  ++E+KE++ ++SL 
Sbjct: 1277 LDDVNKLDQLNTLCGSCKWFAPGSRIIITTRDMDIL---RAKKVDKIYEMKEMNESESLE 1333

Query: 310  LFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMP 369
             FS +AF Q  P   F E+S  V+KY+ G+PLAL+VLGSYL      +W   + KL+ +P
Sbjct: 1334 RFSWHAFKQKSPKEDFSEISINVVKYSGGLPLALEVLGSYLFDREVLDWICVLEKLQSIP 1393

Query: 370  HMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGK 428
            +  + K LK+SY GL DD E++IFLD ACFF G D+  V+  L++CR   +IGI  LV +
Sbjct: 1394 NEQVYKRLKISYHGLNDDTEKSIFLDIACFFIGIDRNDVICILNSCRLFTEIGIKVLVER 1453

Query: 429  SLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
            SLV + + NK+ MHDLL++MG EI+R++S K+P +RSRLW   D+  VL+++T
Sbjct: 1454 SLVIVDDKNKLGMHDLLRDMGREIIREKSPKEPEERSRLWFHGDVLDVLSKHT 1506



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 190/539 (35%), Positives = 283/539 (52%), Gaps = 84/539 (15%)

Query: 133 SESVLIEGNVNDISKKL--SDLFPSDNKDQLVGVES----IIKEIESQLLSGSTEFNTVG 186
           +ES +I+  V ++ + L  +DLF +D     VGV+S    +I+ I++Q    S +   +G
Sbjct: 103 NESEVIKDIVENVIRLLDKTDLFIADYP---VGVDSRVQDMIQLIDTQ---QSNDVLLLG 156

Query: 187 IWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG------------------ 228
           +WG+GG+GKTTIA AIY+ I  +FE   F+ NIR+  E+V G                  
Sbjct: 157 MWGMGGMGKTTIAKAIYNKIGRNFEARSFLANIREVWEQVSGQVYLQEQLMHDIFKETTT 216

Query: 229 -LANIHLN--FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLL 285
            + NI L     + RL   +VL+V  D+  L Q++ L G    F PGSR+IITTRD  +L
Sbjct: 217 KIQNIELEKPILKERLCHKRVLLVLDDVNKLDQLNALCGSRRWFAPGSRIIITTRDKHIL 276

Query: 286 KNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQV 345
              RG +V  ++ +KE+  ++SL LFS +AF                          L+V
Sbjct: 277 ---RGKQVDKIYIMKEMDGSESLELFSWHAFKLT----------------------TLEV 311

Query: 346 LGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGL-DDEEQNIFLDTACFFKGNDQ 404
           LGSYL      EW S + KLK++P+ ++ K LK+SYDGL DD ++ IFLD +CFF G D+
Sbjct: 312 LGSYLFERELLEWISVLEKLKKIPNDEVHKKLKISYDGLNDDTQKEIFLDISCFFIGMDR 371

Query: 405 YLVMNFLDACRFSAKIGISRLVGKSLVTISN-NKITMHDLLQEMGGEIVRQESIKDPGKR 463
             V+  L+ C F A+IGIS LV +SLV + + NK+ MHDLL++MG EI+R++S K+P + 
Sbjct: 372 NDVIRILNGCGFFAEIGISVLVERSLVMVDDKNKLGMHDLLRDMGREIIREKSPKEPEEH 431

Query: 464 SRLWHPEDIYQVLNENT--------------------SLPTGINLDSLKELYLGGCSNLK 503
           SRLW  ED+  VL E+T                    S     N+  L+ L L G     
Sbjct: 432 SRLWFHEDVLDVLLEHTGTKAVEGLTFKMPGRSTQRFSTKAFENMKKLRLLQLSGVQLDG 491

Query: 504 RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
            F  +S N+  L      +  +PS+      +V ++L N S +K V   +  +  L+ LN
Sbjct: 492 DFKYLSRNLRWLHWNGFPLACIPSNFYQ-RNIVSIELEN-SSVKLVWKEMQRMDQLKILN 549

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           LS    L + P +   L +LE L L +     +I  S+  L+K+  + L+NC  L +LP
Sbjct: 550 LSHSHCLTQTP-DFSYLPNLEKLVLKDCPRLSEISQSIGHLNKILLINLKNCISLCNLP 607



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETA-IEELPSSIGNLSRLVDLDLTNCS 544
           +D LK L L     L + P+ S   N+E L LK+   + E+  SIG+L++++ ++L NC 
Sbjct: 542 MDQLKILNLSHSHCLTQTPDFSYLPNLEKLVLKDCPRLSEISQSIGHLNKILLINLKNCI 601

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L ++   +  LKSL+ L LSGCL ++KL E++  +ESL  L        K+P S+
Sbjct: 602 SLCNLPRNIYTLKSLKTLILSGCLMIDKLEEDLEQMESLTTLIANNTAITKVPFSV 657


>gi|297741888|emb|CBI33323.3| unnamed protein product [Vitis vinifera]
          Length = 1186

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 185/528 (35%), Positives = 264/528 (50%), Gaps = 98/528 (18%)

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDES---------EKVGGL---ANIHLN------- 235
           KTTIA AIY+ IS  ++GS F+ NI++ S         E + G+    N  +N       
Sbjct: 66  KTTIAKAIYNEISHQYDGSSFLINIKERSKGDILQLQQELLHGILRGKNFKINNVDEGIS 125

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             +R LS  +VL++F D+ +LKQ++ L    D F   S +IIT+RD  +L  + G+ +  
Sbjct: 126 MIKRCLSSNRVLVIFDDVDELKQLEYLAEEKDWFRAKSTIIITSRDKHVLAQY-GADIR- 183

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            +EV +L+  +++ LFS  AF QN P   +  LS  +I YANG+PLAL+VLG+ L G   
Sbjct: 184 -YEVSKLNKEEAIELFSLWAFKQNRPQEVYKNLSYNIIDYANGLPLALKVLGASLFGKKI 242

Query: 356 EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR 415
             WESA+ KLK MPHM+I  VL++S+DGLDD ++ IFLD ACFFKG+D+  V   L    
Sbjct: 243 SNWESALCKLKIMPHMEIHNVLRISFDGLDDIDKGIFLDVACFFKGDDRDFVSRILGP-- 300

Query: 416 FSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQV 475
             AK  I+ L  + L+T+S N + MHDL+Q+MG EI+RQE  +DPG+RSRL    + Y V
Sbjct: 301 -HAKHAITTLDDRCLITVSKNMLDMHDLIQQMGWEIIRQECPEDPGRRSRLCD-SNAYHV 358

Query: 476 LNENTSL--------------PTGINLDSLKE---LYLGGCSNLKR-----------FPE 507
           L  N                 P+ +  +S KE   L L    N +R           F  
Sbjct: 359 LTGNKGTRAIEGLFLDRCKFNPSELTTESFKEMNRLRLLKIHNPRRKLFLKDHLPRDFEF 418

Query: 508 ISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV-----------SSRLCNL 556
            S  +  L      +E LP +  +   LV+L L + S +K V           S    ++
Sbjct: 419 YSYELAYLHWDGYPLESLPMNF-HAKNLVELSLRD-SNIKQVWRGNKVLLLLFSYNFSSV 476

Query: 557 KSLRRLNLSGCLKLEKLPEEI------------------------GNLESLEYLNLAEKD 592
            +L  L L GC+ LE LP  I                        G++  L  L+L+   
Sbjct: 477 PNLEILTLEGCVNLELLPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTA 536

Query: 593 FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTL 640
              +PSS+  L+ L  L LQ C +L  +P        H  H +SLK L
Sbjct: 537 IMDLPSSITHLNGLQTLLLQECLKLHQIPN-------HICHLSSLKEL 577



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 104/223 (46%), Gaps = 52/223 (23%)

Query: 480  TSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRL 535
            TSLP+ I    SL  L   GCS L+ FPEI  ++E L    L  TAI+E+PSSI  L  L
Sbjct: 947  TSLPSSIFGFKSLATLSCSGCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGL 1006

Query: 536  VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD--- 592
              L L NC  L ++   +CNL S + L +S C    KLP+ +G L+SLEYL +   D   
Sbjct: 1007 QYLLLRNCKNLVNLPESICNLTSFKTLVVSRCPNFNKLPDNLGRLQSLEYLFVGHLDSMN 1066

Query: 593  --------------------------------------------FEKIPSSMKQLSKLSD 608
                                                        F +IP  + QL  L +
Sbjct: 1067 FQLPSLSGLCSLRTLKLQGCNLREFPSEIYYLSSLVTLSLGGNHFSRIPDGISQLYNLEN 1126

Query: 609  LRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRS 650
            L L +CK LQ +PELP G   + A HCTSL+ LS+ S LL  S
Sbjct: 1127 LYLGHCKMLQHIPELPSGLFCLDAHHCTSLENLSSRSNLLWSS 1169



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 5/148 (3%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLVD 537
           LP GI     L+ L   GCS L+RFPEI  ++ +L   DL  TAI +LPSSI +L+ L  
Sbjct: 493 LPRGIYKWKHLQTLSCNGCSKLERFPEIKGDMRELRVLDLSGTAIMDLPSSITHLNGLQT 552

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKI 596
           L L  C  L  + + +C+L SL+ L+L  C  +E  +P +I +L SL+ LNL +  F  I
Sbjct: 553 LLLQECLKLHQIPNHICHLSSLKELDLGHCNIMEGGIPSDICHLSSLQKLNLEQGHFSSI 612

Query: 597 PSSMKQLSKLSDLRLQNCKRLQSLPELP 624
           P+++ QLS+L  L L +C  L+ +PELP
Sbjct: 613 PTTINQLSRLEVLNLSHCNNLEQIPELP 640



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 13/135 (9%)

Query: 506  PEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLS 565
            P   C  +  D+ E  I E P  + +L       L +C  L S+ S +   KSL  L+ S
Sbjct: 912  PRRKCCFKGSDMNEVPIIENPLELDSLC------LRDCRNLTSLPSSIFGFKSLATLSCS 965

Query: 566  GCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPC 625
            GC +LE  PE + ++ESL  L L     ++IPSS+++L  L  L L+NCK L +LPE  C
Sbjct: 966  GCSQLESFPEILQDMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESIC 1025

Query: 626  GSSIHARHCTSLKTL 640
                   + TS KTL
Sbjct: 1026 -------NLTSFKTL 1033


>gi|296085626|emb|CBI29415.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 142/342 (41%), Positives = 201/342 (58%), Gaps = 26/342 (7%)

Query: 152 LFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFE 211
           LF  DN    VG++S  K+I   L   S +   VGI G+GGIGKTTIAS IY+ IS  FE
Sbjct: 54  LFVEDN---FVGMDSHFKKISLGLSMESNDVRMVGICGLGGIGKTTIASYIYNQISWGFE 110

Query: 212 GSYFMQNIRD--------------ESEKVGG----LANIHLNFE--RRRLSRMKVLIVFY 251
              F++ +++               ++ + G    ++NIH      +  LS  K LIVF 
Sbjct: 111 CCSFLEKVKEVYKNKGLLGLQNQLLNDILEGANQKISNIHRGAHVIKNNLSLQKALIVFD 170

Query: 252 DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLF 311
           D+ D+ Q++ L+G    +  GSR+IITTRD Q L       V +++ V+ L+ N++L LF
Sbjct: 171 DVDDMDQLEFLVGNHAWYGKGSRIIITTRDKQCLTM---PNVDYLYNVEGLNSNEALELF 227

Query: 312 SRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHM 371
           SR AF  N P   F  L +  I Y  G+PLAL+VLGS L G ++ EW+S ++KL++ P M
Sbjct: 228 SRYAFRSNLPKEDFENLLDHAIHYCEGLPLALKVLGSLLCGKTKGEWKSELHKLEKEPEM 287

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
            IQ VLK+S+DGLD  +Q I LD ACFF+G D+       D      +I I  L  + L+
Sbjct: 288 KIQSVLKISFDGLDTTQQMILLDIACFFQGEDKDFASKIWDGYELYGEINIRVLSERCLI 347

Query: 432 TISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           TISNN++ MH L+++M  +IVR++  KD  K SRLW+P+DIY
Sbjct: 348 TISNNRLHMHGLIEKMCKKIVREQHPKDTSKWSRLWNPDDIY 389


>gi|224120756|ref|XP_002330944.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
 gi|222873138|gb|EEF10269.1| hypothetical protein POPTRDRAFT_838042 [Populus trichocarpa]
          Length = 813

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 189/591 (31%), Positives = 303/591 (51%), Gaps = 86/591 (14%)

Query: 145 ISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYS 204
           IS KLS   P+ +K +LVG++S ++ +   +     E   +GI G+GGIGKTT++  +Y 
Sbjct: 21  ISYKLSVTLPTISK-KLVGIDSRVEVLNGYIGEEVGEAIFIGICGMGGIGKTTVSRVLYD 79

Query: 205 NISSHFEGSYFMQNIRDE-SEKVGG-------LANIHLN----FERRRLSRMKVLIVFY- 251
            I   FEGS F+ N+R+  +EK G        L+ I +     ++  R   M    +   
Sbjct: 80  RIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSSRGIEMIKRRLRLK 139

Query: 252 -------DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
                  D+ D KQ++ L      F P SR+IIT+RD  +   +  +++   +E ++L+ 
Sbjct: 140 KILLILDDVDDKKQLEFLAAEPGWFGPRSRIIITSRDKNVFTGNDDTKI---YEAEKLND 196

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           +D+L LFS+ AF  + PA  F+ELS  V+ YANG+PLAL+V+GS+L G S  EW  A+N+
Sbjct: 197 DDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIPEWRGAINR 256

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           +  +P   I  VL++S+DGL + +Q IFLD ACF KG  +  +   LD+C F+A IGI  
Sbjct: 257 MHEIPDCKIMDVLRISFDGLHESDQKIFLDIACFLKGFKKDRITRILDSCGFNAGIGIPV 316

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL-- 482
           L+ +SL+++  +++ MH+LLQ MG EIVR E  K+PGKRSRLW  ED+   L +NT    
Sbjct: 317 LIERSLISVYGDQVWMHNLLQIMGKEIVRCEDPKEPGKRSRLWTYEDVSLALMDNTGKEK 376

Query: 483 --PTGINLDSLKELYLGGCSNLKRFPEIS----CNIEDLDLKETAIE------------- 523
                +++  +KE       N+K F ++S      I+++ L E   +             
Sbjct: 377 IEAIFLDMPGIKEAQW----NMKAFSKMSRLRLLKIDNVQLSEGPEDLSKELRFLEWHSY 432

Query: 524 ---ELPSSIGNLSRLVDLDLTNCS------GLKSV----------------SSRLCNLKS 558
               LP+ +  +  LV+L + N S      G KS                 +  L  + +
Sbjct: 433 PSKSLPAGL-QVDGLVELHMANSSIEQLWYGCKSAVNLKVINLSNSLNLSKTPDLTGIPN 491

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           L  L L GC  L ++   +G  ++L+Y+NL   K F  +PS++ ++  L    L  C +L
Sbjct: 492 LSSLILEGCTSLSEVHPSLGRHKNLQYVNLVNCKSFRILPSNL-EMESLKVFTLDGCTKL 550

Query: 618 QSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKH----WDIFNFSNCSN 664
           +  P++     +   +C     L  +      SS H     ++ + +NC N
Sbjct: 551 EKFPDI-----VGNMNCLMELCLDGTGIAELSSSIHHLIGLEVLSMNNCKN 596



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 9/151 (5%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP+ + ++SLK   L GC+ L++FP+I  N+    +L L  T I EL SSI +L  L  L
Sbjct: 530 LPSNLEMESLKVFTLDGCTKLEKFPDIVGNMNCLMELCLDGTGIAELSSSIHHLIGLEVL 589

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + NC  L+S+ S +  LKSL++L+LSGC +L+ +PE +G +ESLE  +++     + P+
Sbjct: 590 SMNNCKNLESIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFDVSGTSIRQPPA 649

Query: 599 SMKQLSKLSDLRLQNCKRL------QSLPEL 623
           S+  L  L  L    CKR+      Q LP L
Sbjct: 650 SIFLLKSLKVLSFDGCKRIAVNPTDQRLPSL 680



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 11/177 (6%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L GCS LK  PE    +E L   D+  T+I + P+SI  L  L 
Sbjct: 599 SIPSSIGCLKSLKKLDLSGCSELKNIPENLGKVESLEEFDVSGTSIRQPPASIFLLKSLK 658

Query: 537 DLDLTNCS--GLKSVSSRLCNLK---SLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAE 590
            L    C    +     RL +L    SL  L+L  C L+   LPE+IG L SL+ L+L+ 
Sbjct: 659 VLSFDGCKRIAVNPTDQRLPSLSGLCSLEVLDLCACNLREGALPEDIGCLSSLKSLDLSR 718

Query: 591 KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
            +F  +P S+ +L  L  L L++C+ L+SLPE+P    +++   C  LK + +   L
Sbjct: 719 NNFVSLPRSINKLFGLETLVLEDCRMLESLPEVPSKVQTLNLNGCIRLKEIPDPIKL 775


>gi|356559378|ref|XP_003547976.1| PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N [Glycine
           max]
          Length = 439

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/434 (36%), Positives = 242/434 (55%), Gaps = 59/434 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+ F  +L   L    I TFIDD +   G+EI+ +L +AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRYGFTGYLYNVLRERGIHTFIDDDEPQEGDEITTALEAAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGYCP-SLG--------- 123
           + SE YASS +CLN L  IL  +K     +V+PVFY V+PSD  +   S G         
Sbjct: 68  VLSENYASSSFCLNSLTHILNFTKENNDVLVLPVFYRVNPSDVRHHRGSFGEALANHEKK 127

Query: 124 -----------W-MGIFDIP--TSESVLIEGN------VNDISKKLSDLFPSDN---KDQ 160
                      W M +  +   +      +GN      + +I + +S+ F  D+    D 
Sbjct: 128 SNSNNMEKLETWKMALHQVSNISGHHFQHDGNKYEYKFIKEIVESVSNKFNHDHLHVSDV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG+ES + E++S L  G  +  + VGI G+ G+GKTT+A A+Y++I+ HFE S F++N+
Sbjct: 188 LVGLESPVLEVKSLLDVGRDDVVHMVGIHGLAGVGKTTLAIAVYNSIAGHFEASCFLENV 247

Query: 220 RDESEKVGGLANIH-------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
           +  S  + GL  +                    +   +R+L + KVL++  D+ + KQ+ 
Sbjct: 248 KRTSNTINGLEKLQSFLLSKTAGEIKLTNWREGIPIIKRKLKQKKVLLILDDVDEDKQLQ 307

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-QN 319
            LIG  D F  GSR+IITTRD  LL  H    V   ++V+EL+   +L L ++ AF  + 
Sbjct: 308 ALIGSPDWFGLGSRIIITTRDEHLLALHN---VKITYKVRELNEKHALQLLTQKAFELEK 364

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                + ++ N  + YA+G+P  L+V+GS L G S EEW+SA++  +R+PH  I  +LKV
Sbjct: 365 GIDPSYHDILNRAVTYASGLPFVLEVIGSNLFGKSIEEWKSALDGYERIPHKKIYXILKV 424

Query: 380 SYDGLDDEEQNIFL 393
           SYD L+++E++IFL
Sbjct: 425 SYDALNEDEKSIFL 438


>gi|227438189|gb|ACP30584.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 980

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 185/606 (30%), Positives = 291/606 (48%), Gaps = 99/606 (16%)

Query: 137 LIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKT 196
           +I+    DIS  L++  PS + D LVG+ + +K++E  L  GS E   +GIWG  GIGKT
Sbjct: 1   MIKKIATDISNMLNNFTPSTDFDGLVGMGAHLKKMEPLLCLGSDEVRMIGIWGPPGIGKT 60

Query: 197 TIASAIYSNISSHFEGSYFMQNIRDESEKVGG----------------------LANIHL 234
           TIA   Y+ +S+ F+ S FM +I+  S ++                        +   HL
Sbjct: 61  TIARVAYNQLSNSFQLSVFMDDIKANSSRLCSDDYSVKLQLQQQFMSQITDHKDMVVSHL 120

Query: 235 NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
                RL   KVL+V   +    Q+D +      F PGSR+IITT+D +LL+ H    + 
Sbjct: 121 GVASNRLKDKKVLVVLDGVDRSIQLDAMAKETWWFGPGSRIIITTQDQKLLRAHG---IN 177

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
           H++EV   + +++L +F  ++FGQ  P  GF EL+  V + +  +PL L+V+GSY +GMS
Sbjct: 178 HIYEVDFPTNDEALQIFCMHSFGQKSPKYGFEELAREVTQLSGELPLGLRVMGSYFRGMS 237

Query: 355 EEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC 414
           ++EW + + +L+   + DI+ +LK SYD LDDE++ +FL  ACFF   + + V  +L   
Sbjct: 238 KQEWINVLPRLRTSLYADIRSILKFSYDALDDEDKYLFLHIACFFSYEEIHKVEVYLAKK 297

Query: 415 RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
               +  ++ L  +SL++I    I MH LL+++G EIV ++SI DPG+R  L+   +I +
Sbjct: 298 FVEVRQRLNVLAERSLISIDWGVIRMHSLLEKLGREIVCKQSIHDPGQRQFLYDCREICE 357

Query: 475 VLN-ENTSLPT--GINLDSLK--------ELYLGGCSNLK-------------------- 503
           +L  E T   +  GI LD  K        E    G SNL+                    
Sbjct: 358 LLTGEATGSKSVIGIKLDYYKIEEELDVSEKAFDGMSNLQFLQVNGYGAPLQLTRGLNYL 417

Query: 504 ----------RFPE--ISCNIE-----DLDLKETAIEELPSSIGNLSRLVDLDLTNCSGL 546
                      FP     CN+      +L +  + +E+L   I  L  L  +DL++   L
Sbjct: 418 SHKLRLLHWSHFPMSCFPCNVNLEFLVELIMIGSKLEKLWEGIKPLRSLKWMDLSDSVNL 477

Query: 547 KSVS--SRLCNLK-------------------SLRRLNLSGCLKLEKLPEEIGNLESLEY 585
           K +   S   NL+                   S+  L++ GC  L + P   GN  +L  
Sbjct: 478 KELPNLSTATNLEKLYLRNCWSLIKLPCLPGNSMEELDIGGCSSLVQFPSFTGNAVNLLK 537

Query: 586 LNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTL 640
           LNL    +  ++PS +   + L +L L NC  L  LP     L    ++  + C+ L+  
Sbjct: 538 LNLVSFPNLVELPSYVGNATNLENLNLSNCSHLVELPLSFGNLQKLQTLILKGCSKLENF 597

Query: 641 SNSSTL 646
            N+ TL
Sbjct: 598 PNNITL 603



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 38/184 (20%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
           LPT INL+SL EL L  CS LK FPEIS  I +L L  TAIE++P SI + SRL +L ++
Sbjct: 693 LPTNINLESLFELNLNDCSMLKHFPEISTYIRNLYLIGTAIEQVPPSIRSWSRLDELKMS 752

Query: 542 NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
               LK                                LE +  + L + + +++P  +K
Sbjct: 753 YFENLKGFPHA---------------------------LERITCMCLTDTEIQELPPWVK 785

Query: 602 QLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSLKTLSNSSTLLTRSSKHWDIFN 658
           ++S+LS   L+ C++L +LP +    SI    A  C SL+ L  S          +   N
Sbjct: 786 KISRLSVFVLKGCRKLVTLPAI--SESIRYMDASDCKSLEILECS------FHNQYLTLN 837

Query: 659 FSNC 662
           F+NC
Sbjct: 838 FANC 841



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 27/167 (16%)

Query: 481 SLPTGINLDSLKELYLGGCS--NLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRL 535
           + P  I L+ L +L L GCS  +L  F  I    N++ L+L     + E+PS IGN + L
Sbjct: 596 NFPNNITLEFLNDLDLAGCSSLDLSGFSTIVNVVNLQTLNLSSLPQLLEVPSFIGNATNL 655

Query: 536 VDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE----K 591
            DL L+NCS L  +   + NL+ L+RL L GC KLE LP  I NLESL  LNL +    K
Sbjct: 656 EDLILSNCSNLVELPLFIGNLQKLKRLRLEGCSKLEVLPTNI-NLESLFELNLNDCSMLK 714

Query: 592 DF-----------------EKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            F                 E++P S++  S+L +L++   + L+  P
Sbjct: 715 HFPEISTYIRNLYLIGTAIEQVPPSIRSWSRLDELKMSYFENLKGFP 761



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 31/163 (19%)

Query: 489 DSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIE-----ELPSSIGNLSRLVDLDLTNC 543
           +S++EL +GGCS+L +FP  + N  +L LK   +      ELPS +GN + L +L+L+NC
Sbjct: 509 NSMEELDIGGCSSLVQFPSFTGNAVNL-LKLNLVSFPNLVELPSYVGNATNLENLNLSNC 567

Query: 544 SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG------------------------N 579
           S L  +     NL+ L+ L L GC KLE  P  I                         N
Sbjct: 568 SHLVELPLSFGNLQKLQTLILKGCSKLENFPNNITLEFLNDLDLAGCSSLDLSGFSTIVN 627

Query: 580 LESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           + +L+ LNL+      ++PS +   + L DL L NC  L  LP
Sbjct: 628 VVNLQTLNLSSLPQLLEVPSFIGNATNLEDLILSNCSNLVELP 670


>gi|224120770|ref|XP_002330947.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
 gi|222873141|gb|EEF10272.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
          Length = 1120

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 175/523 (33%), Positives = 276/523 (52%), Gaps = 58/523 (11%)

Query: 145 ISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYS 204
           IS KLS   P+ +K +LVG++S ++ +   +     +   +GI G+GGIGKTT+A  +Y 
Sbjct: 21  ISYKLSVTLPTISK-KLVGIDSRVEVLNGYIGEEVGKAIFIGICGMGGIGKTTVARVLYD 79

Query: 205 NISSHFEGSYFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFY------------- 251
            I   FEGS F+ N+R+   +  G   +        L     +   Y             
Sbjct: 80  RIRWQFEGSCFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSYRGIEMIKRRLRLK 139

Query: 252 -------DLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSY 304
                  D+ D KQ++ L      F PGSR+IIT+RD  ++  +  +++   +E ++L+ 
Sbjct: 140 KILLILDDVDDKKQLEFLAEEPGWFGPGSRIIITSRDTNVITGNDDTKI---YEAEKLND 196

Query: 305 NDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNK 364
           +D+L LFS+ AF  + PA  F+ELS  V+ YANG+PLAL+V+GS+L G S  EW  A+N+
Sbjct: 197 DDALMLFSQKAFKNDQPAEDFVELSKQVVGYANGLPLALEVIGSFLYGRSIPEWRGAINR 256

Query: 365 LKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISR 424
           +  +P   I  VL++S+DGL + ++ IFLD ACF KG  +  ++  LD+C F A IG   
Sbjct: 257 MNEIPDCKIIDVLRISFDGLHESDKKIFLDIACFLKGFKKDRIIRILDSCGFHAHIGTQV 316

Query: 425 LVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL-- 482
           L+ KSL+++S +++ MH+LLQ MG EIVR ES ++PG+RSRLW  ED+   L +NT    
Sbjct: 317 LIEKSLISVSRDQVWMHNLLQIMGKEIVRCESPEEPGRRSRLWTYEDVCLALMDNTGKEK 376

Query: 483 --PTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGN--------- 531
                +++  +KE       N++ F ++S  +  L +    + E P  + N         
Sbjct: 377 IEAIFLDMPGIKESQW----NIEAFSKMS-RLRLLKINNVQLSEGPEDLSNKLQFLEWHS 431

Query: 532 -----------LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG-- 578
                      + +LV+L + N S L+ +     +  +L+ +NLS  L L K P+  G  
Sbjct: 432 YPSKSLPVGLQVDQLVELHMAN-SNLEQLWYGCKSAVNLKIINLSNSLYLTKTPDLTGIP 490

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
           NLESL           ++  S+    KL  + L NCK ++ LP
Sbjct: 491 NLESLILEGCT--SLSEVHPSLAHHKKLQYMNLVNCKSIRILP 531



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 87/145 (60%), Gaps = 3/145 (2%)

Query: 482 LPTGINLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEELPSSIGNLSRLVDL 538
           LP  + + SLK   L GCS L++FP+I  N++    L L  T I +L SS+ +L  L  L
Sbjct: 530 LPNNLEMGSLKVCILDGCSKLEKFPDIVGNMKCLMVLRLDGTGITKLSSSMHHLIGLGLL 589

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
            + +C  L+S+ S +  LKSL++L+LSGC +L+ +PE++G +ESLE  +++     ++P+
Sbjct: 590 SMNSCKNLESIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDVSGTSIRQLPA 649

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL 623
           S+  L  L  L L   KR+   P L
Sbjct: 650 SIFLLKNLKVLSLDGFKRIVMPPSL 674



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 21/194 (10%)

Query: 481 SLPTGIN-LDSLKELYLGGCSNLKRFPEISCNIEDL---DLKETAIEELPSSIGNLSRLV 536
           S+P+ I  L SLK+L L GCS LK  PE    +E L   D+  T+I +LP+SI  L  L 
Sbjct: 599 SIPSSIGCLKSLKKLDLSGCSELKYIPEKLGEVESLEEFDVSGTSIRQLPASIFLLKNLK 658

Query: 537 DLDLTNCSGLKSV--SSRLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLAEKDF 593
            L L    G K +     L  L SL  L L  C L+   LPE+IG L SL  L+L++ +F
Sbjct: 659 VLSL---DGFKRIVMPPSLSGLCSLEVLGLCACNLREGALPEDIGCLSSLRSLDLSQNNF 715

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSK 652
             +P S+ QL +L  L L++C  L+SLP++P    ++    C SLKT+ +   L   SSK
Sbjct: 716 VSLPKSINQLFELEMLVLEDCTMLESLPKVPSKVQTVCLNGCISLKTIPDPINL--SSSK 773

Query: 653 --------HWDIFN 658
                    W+++N
Sbjct: 774 ISEFVCLNCWELYN 787


>gi|186511687|ref|NP_001118968.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|29839687|sp|Q9SZ67.1|WRK19_ARATH RecName: Full=Probable WRKY transcription factor 19; AltName:
            Full=WRKY DNA-binding protein 19
 gi|4586107|emb|CAB40943.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7267903|emb|CAB78245.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332657685|gb|AEE83085.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1895

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 220/723 (30%), Positives = 331/723 (45%), Gaps = 144/723 (19%)

Query: 12   PHPK------HDVFLSFRGKDVRH-NFVSHLNAALCREKIETFIDDKLNRGNEISPSLSS 64
            P+P+      +DV + +   D+ + +F+SHL A+LCR  I  +      + NE+      
Sbjct: 658  PYPRFSSSKDYDVVIRYGRADISNEDFISHLRASLCRRGISVY-----EKFNEVD----- 707

Query: 65   AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGW 124
            A+   ++ I++ +  Y  S      L+ ILE ++   ++V P+FY + P D   C S  +
Sbjct: 708  ALPKCRVLIIVLTSTYVPS-----NLLNILEHQHTEDRVVYPIFYRLSPYDF-VCNSKNY 761

Query: 125  MGIF--DIPT--------------------SESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
               +  D P                     SES LI+  V D  K L     S +K  ++
Sbjct: 762  ERFYLQDEPKKWQAALKEITQMPGYTLTDKSESELIDEIVRDALKVLC----SADKVNMI 817

Query: 163  GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
            G++  ++EI S L   S +  ++GIWG  GIGKTTIA  I+  IS  +E    ++++  E
Sbjct: 818  GMDMQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKE 877

Query: 223  SEKVGG--------------------LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
             E  G                     +++I  +F R RL R ++L++  D+ D + +D  
Sbjct: 878  VEVKGHDAVRENFLSEVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTF 937

Query: 263  IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            +G L+ F PGSR+I+T+R+ ++       ++ HV+EVK L    SL L  R         
Sbjct: 938  LGTLNYFGPGSRIIMTSRNRRVFVL---CKIDHVYEVKPLDIPKSLLLLDRGTCQIVLSP 994

Query: 323  AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
              +  LS  ++K++NG P  LQ L S      + EW     ++K    + I  + + S  
Sbjct: 995  EVYKTLSLELVKFSNGNPQVLQFLSSI-----DREWNKLSQEVKTTSPIYIPGIFEKSCC 1049

Query: 383  GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMH 441
            GLDD E+ IFLD ACFF   D+  V   LD C FSA +G   LV KSL+TIS +N + M 
Sbjct: 1050 GLDDNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDML 1109

Query: 442  DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKELYLGGC 499
              +Q  G EIVRQES   PG RSRLW+ + I  V   +  TS   GI LD L    L   
Sbjct: 1110 SFIQATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLN---LKFD 1166

Query: 500  SNLKRFPEISCNIEDLDLKETAIEE------------LPSSIG----------------N 531
            +N   F E  CN+  L L  +  EE            LPS +                 N
Sbjct: 1167 ANPNVF-EKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFN 1225

Query: 532  LSRLVDLDL-TNCSG--LKSVSSRLC----NLKSLRRLNLSGCLKLEKLPE--EIGNLES 582
               LV+L+L ++C+    K   +R C    +L+ L+++ LS   +L K+P      NLE 
Sbjct: 1226 PENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEH 1285

Query: 583  LE---------------------YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
            ++                     +LNL      E IP SM  L  L  L L  C +L + 
Sbjct: 1286 IDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIP-SMVDLESLEVLNLSGCSKLGNF 1344

Query: 621  PEL 623
            PE+
Sbjct: 1345 PEI 1347



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 89/136 (65%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            ++P+ ++L+SL+ L L GCS L  FPEIS N+++L +  T I+E+PSSI NL  L  LDL
Sbjct: 1320 NIPSMVDLESLEVLNLSGCSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDL 1379

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             N   LK++ + +  LK L  LNLSGC+ LE+ P+    ++ L +L+L+  D +++PSS+
Sbjct: 1380 ENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSI 1439

Query: 601  KQLSKLSDLRLQNCKR 616
              L+ L +L   + +R
Sbjct: 1440 SYLTALDELLFVDSRR 1455



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 11/168 (6%)

Query: 484  TGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDL 540
            T  +L+ LK++ L     L + P +S   N+E +DL+   ++  L  SI  L +LV L+L
Sbjct: 1253 TNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNL 1312

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
              CS L+++ S + +L+SL  LNLSGC KL   PE   N++ L    +     ++IPSS+
Sbjct: 1313 KGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISPNVKEL---YMGGTMIQEIPSSI 1368

Query: 601  KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSS 644
            K L  L  L L+N + L++LP    +L    +++   C SL+   +SS
Sbjct: 1369 KNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSS 1416


>gi|238480299|ref|NP_001154222.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657686|gb|AEE83086.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1879

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 220/723 (30%), Positives = 331/723 (45%), Gaps = 144/723 (19%)

Query: 12   PHPK------HDVFLSFRGKDVRH-NFVSHLNAALCREKIETFIDDKLNRGNEISPSLSS 64
            P+P+      +DV + +   D+ + +F+SHL A+LCR  I  +      + NE+      
Sbjct: 658  PYPRFSSSKDYDVVIRYGRADISNEDFISHLRASLCRRGISVY-----EKFNEVD----- 707

Query: 65   AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGW 124
            A+   ++ I++ +  Y  S      L+ ILE ++   ++V P+FY + P D   C S  +
Sbjct: 708  ALPKCRVLIIVLTSTYVPS-----NLLNILEHQHTEDRVVYPIFYRLSPYDF-VCNSKNY 761

Query: 125  MGIF--DIPT--------------------SESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
               +  D P                     SES LI+  V D  K L     S +K  ++
Sbjct: 762  ERFYLQDEPKKWQAALKEITQMPGYTLTDKSESELIDEIVRDALKVLC----SADKVNMI 817

Query: 163  GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
            G++  ++EI S L   S +  ++GIWG  GIGKTTIA  I+  IS  +E    ++++  E
Sbjct: 818  GMDMQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKE 877

Query: 223  SEKVGG--------------------LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
             E  G                     +++I  +F R RL R ++L++  D+ D + +D  
Sbjct: 878  VEVKGHDAVRENFLSEVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTF 937

Query: 263  IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            +G L+ F PGSR+I+T+R+ ++       ++ HV+EVK L    SL L  R         
Sbjct: 938  LGTLNYFGPGSRIIMTSRNRRVFVL---CKIDHVYEVKPLDIPKSLLLLDRGTCQIVLSP 994

Query: 323  AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
              +  LS  ++K++NG P  LQ L S      + EW     ++K    + I  + + S  
Sbjct: 995  EVYKTLSLELVKFSNGNPQVLQFLSSI-----DREWNKLSQEVKTTSPIYIPGIFEKSCC 1049

Query: 383  GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMH 441
            GLDD E+ IFLD ACFF   D+  V   LD C FSA +G   LV KSL+TIS +N + M 
Sbjct: 1050 GLDDNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDML 1109

Query: 442  DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKELYLGGC 499
              +Q  G EIVRQES   PG RSRLW+ + I  V   +  TS   GI LD L    L   
Sbjct: 1110 SFIQATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLN---LKFD 1166

Query: 500  SNLKRFPEISCNIEDLDLKETAIEE------------LPSSIG----------------N 531
            +N   F E  CN+  L L  +  EE            LPS +                 N
Sbjct: 1167 ANPNVF-EKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFN 1225

Query: 532  LSRLVDLDL-TNCSG--LKSVSSRLC----NLKSLRRLNLSGCLKLEKLPE--EIGNLES 582
               LV+L+L ++C+    K   +R C    +L+ L+++ LS   +L K+P      NLE 
Sbjct: 1226 PENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEH 1285

Query: 583  LE---------------------YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
            ++                     +LNL      E IP SM  L  L  L L  C +L + 
Sbjct: 1286 IDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIP-SMVDLESLEVLNLSGCSKLGNF 1344

Query: 621  PEL 623
            PE+
Sbjct: 1345 PEI 1347



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 89/136 (65%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            ++P+ ++L+SL+ L L GCS L  FPEIS N+++L +  T I+E+PSSI NL  L  LDL
Sbjct: 1320 NIPSMVDLESLEVLNLSGCSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDL 1379

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             N   LK++ + +  LK L  LNLSGC+ LE+ P+    ++ L +L+L+  D +++PSS+
Sbjct: 1380 ENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSI 1439

Query: 601  KQLSKLSDLRLQNCKR 616
              L+ L +L   + +R
Sbjct: 1440 SYLTALDELLFVDSRR 1455



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 11/168 (6%)

Query: 484  TGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDL 540
            T  +L+ LK++ L     L + P +S   N+E +DL+   ++  L  SI  L +LV L+L
Sbjct: 1253 TNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNL 1312

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
              CS L+++ S + +L+SL  LNLSGC KL   PE   N++ L    +     ++IPSS+
Sbjct: 1313 KGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISPNVKEL---YMGGTMIQEIPSSI 1368

Query: 601  KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSS 644
            K L  L  L L+N + L++LP    +L    +++   C SL+   +SS
Sbjct: 1369 KNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSS 1416


>gi|30681996|ref|NP_192939.2| putative WRKY transcription factor 19 [Arabidopsis thaliana]
 gi|332657684|gb|AEE83084.1| putative WRKY transcription factor 19 [Arabidopsis thaliana]
          Length = 1798

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 220/723 (30%), Positives = 331/723 (45%), Gaps = 144/723 (19%)

Query: 12   PHPK------HDVFLSFRGKDVRH-NFVSHLNAALCREKIETFIDDKLNRGNEISPSLSS 64
            P+P+      +DV + +   D+ + +F+SHL A+LCR  I  +      + NE+      
Sbjct: 658  PYPRFSSSKDYDVVIRYGRADISNEDFISHLRASLCRRGISVY-----EKFNEVD----- 707

Query: 65   AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGW 124
            A+   ++ I++ +  Y  S      L+ ILE ++   ++V P+FY + P D   C S  +
Sbjct: 708  ALPKCRVLIIVLTSTYVPS-----NLLNILEHQHTEDRVVYPIFYRLSPYDF-VCNSKNY 761

Query: 125  MGIF--DIPT--------------------SESVLIEGNVNDISKKLSDLFPSDNKDQLV 162
               +  D P                     SES LI+  V D  K L     S +K  ++
Sbjct: 762  ERFYLQDEPKKWQAALKEITQMPGYTLTDKSESELIDEIVRDALKVLC----SADKVNMI 817

Query: 163  GVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE 222
            G++  ++EI S L   S +  ++GIWG  GIGKTTIA  I+  IS  +E    ++++  E
Sbjct: 818  GMDMQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHKE 877

Query: 223  SEKVGG--------------------LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLL 262
             E  G                     +++I  +F R RL R ++L++  D+ D + +D  
Sbjct: 878  VEVKGHDAVRENFLSEVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDTF 937

Query: 263  IGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA 322
            +G L+ F PGSR+I+T+R+ ++       ++ HV+EVK L    SL L  R         
Sbjct: 938  LGTLNYFGPGSRIIMTSRNRRVFVL---CKIDHVYEVKPLDIPKSLLLLDRGTCQIVLSP 994

Query: 323  AGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYD 382
              +  LS  ++K++NG P  LQ L S      + EW     ++K    + I  + + S  
Sbjct: 995  EVYKTLSLELVKFSNGNPQVLQFLSSI-----DREWNKLSQEVKTTSPIYIPGIFEKSCC 1049

Query: 383  GLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMH 441
            GLDD E+ IFLD ACFF   D+  V   LD C FSA +G   LV KSL+TIS +N + M 
Sbjct: 1050 GLDDNERGIFLDIACFFNRIDKDNVAMLLDGCGFSAHVGFRGLVDKSLLTISQHNLVDML 1109

Query: 442  DLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVL--NENTSLPTGINLDSLKELYLGGC 499
              +Q  G EIVRQES   PG RSRLW+ + I  V   +  TS   GI LD L    L   
Sbjct: 1110 SFIQATGREIVRQESADRPGDRSRLWNADYIRHVFINDTGTSAIEGIFLDMLN---LKFD 1166

Query: 500  SNLKRFPEISCNIEDLDLKETAIEE------------LPSSIG----------------N 531
            +N   F E  CN+  L L  +  EE            LPS +                 N
Sbjct: 1167 ANPNVF-EKMCNLRLLKLYCSKAEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFN 1225

Query: 532  LSRLVDLDL-TNCSG--LKSVSSRLC----NLKSLRRLNLSGCLKLEKLPE--EIGNLES 582
               LV+L+L ++C+    K   +R C    +L+ L+++ LS   +L K+P      NLE 
Sbjct: 1226 PENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEH 1285

Query: 583  LE---------------------YLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSL 620
            ++                     +LNL      E IP SM  L  L  L L  C +L + 
Sbjct: 1286 IDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIP-SMVDLESLEVLNLSGCSKLGNF 1344

Query: 621  PEL 623
            PE+
Sbjct: 1345 PEI 1347



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 89/136 (65%)

Query: 481  SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
            ++P+ ++L+SL+ L L GCS L  FPEIS N+++L +  T I+E+PSSI NL  L  LDL
Sbjct: 1320 NIPSMVDLESLEVLNLSGCSKLGNFPEISPNVKELYMGGTMIQEIPSSIKNLVLLEKLDL 1379

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
             N   LK++ + +  LK L  LNLSGC+ LE+ P+    ++ L +L+L+  D +++PSS+
Sbjct: 1380 ENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSI 1439

Query: 601  KQLSKLSDLRLQNCKR 616
              L+ L +L   + +R
Sbjct: 1440 SYLTALDELLFVDSRR 1455



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 11/168 (6%)

Query: 484  TGINLDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDL 540
            T  +L+ LK++ L     L + P +S   N+E +DL+   ++  L  SI  L +LV L+L
Sbjct: 1253 TNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNL 1312

Query: 541  TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
              CS L+++ S + +L+SL  LNLSGC KL   PE   N++ L    +     ++IPSS+
Sbjct: 1313 KGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISPNVKEL---YMGGTMIQEIPSSI 1368

Query: 601  KQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNSS 644
            K L  L  L L+N + L++LP    +L    +++   C SL+   +SS
Sbjct: 1369 KNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSS 1416


>gi|297842027|ref|XP_002888895.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334736|gb|EFH65154.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 926

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 225/696 (32%), Positives = 343/696 (49%), Gaps = 99/696 (14%)

Query: 4   SSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSL 62
           +SSS++ +    +DVFLSFRGKD R   VS L   L R+ I T+ DD+ +  G+EI   L
Sbjct: 2   ASSSLSTLVRSNYDVFLSFRGKDTRRTVVSFLYKDLIRQGILTYKDDQGIGAGSEIKERL 61

Query: 63  SSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC--- 119
             AI+ S++++V  SE YA+S+WCL EL  I+E  +     VVP+FY VDPSD  +    
Sbjct: 62  IEAIKTSQVAVVFISENYATSQWCLEELRLIMELHSVNRIHVVPIFYRVDPSDVRHQKGR 121

Query: 120 ------------PSLG--WM-------GIFDIPTSE----SVLIEGNVNDISKKLSDLFP 154
                       P+    W         I  I ++E    S +I+  V  IS+ L     
Sbjct: 122 FAAAFQKHEDREPNRASQWRRALNQISHISGIHSTEWDDDSAMIDEVVVSISRHLLLRME 181

Query: 155 SDNKDQLVGVESIIKEIESQLLSGS-TEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           S   + LVG+E+ + ++      GS  +   +GIWG+GGIGKTTIA+ +Y   SS F   
Sbjct: 182 STVLNSLVGMEAHMVKMNLIFNMGSENQVLFIGIWGMGGIGKTTIANCLYDRFSSQFSAR 241

Query: 214 YFMQNIRD--------------ESEKVGGLANIHLNFERR------RLSRMKVLIVFYDL 253
           YF+++I++               S   GGL     + E R      RL   K+LIV   +
Sbjct: 242 YFIEDIKNICKDKSPAYLQERFLSRICGGLDIGFRSHEARSQEIIARLGHQKILIVLDGV 301

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
              +Q+D L      F PGSR+IITTRD  LL +     V +V+EVK L   D+L +F  
Sbjct: 302 DKAEQVDALAKDTSWFGPGSRIIITTRDRGLLNS---CGVNNVYEVKCLDDKDALQVFKI 358

Query: 314 NAF-GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLK-GMSEEEWESAVNKLKRMPHM 371
           +A  G   P+ GF +L     + A+G+P AL    +YL+   + ++WE  +  L+  PH 
Sbjct: 359 SALRGSPPPSDGFEQLFIRASRLAHGLPSALVTYATYLRQNTTIKKWEEELGLLETSPHK 418

Query: 372 DIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLV 431
           +++++L+ SYD LD++++  FL  AC   G     V + LD      +  ++ L  K+L+
Sbjct: 419 NVKEILRNSYDDLDEQDKTAFLYVACLLNGYPFNHVTSLLD----DGRPRMNHLTAKALI 474

Query: 432 TIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT---------- 480
           +IS +  I MH L+ + G  IVRQES   P ++  LW  ++IY VL+ N           
Sbjct: 475 SISMDGCINMHFLVVQTGKAIVRQESRNRPSRQRFLWDHKEIYDVLDNNIGTDEIEGVTL 534

Query: 481 -------SLPTGIN----LDSLKEL----YLGGC-SNLK------RFPEISCNIEDLDLK 518
                   LP  I     + S+K L    +LG   SN++       FP    NI  L   
Sbjct: 535 HMCEMPDKLPMSITVFNIMHSIKFLKFFKHLGDAESNVQLSEDGFYFPR---NIRLLHWD 591

Query: 519 ETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
           +  ++ LPS+  + + L +   +  +G  S +S +   K LRRL+L+G   L +LP+   
Sbjct: 592 DYPMKTLPSTRSDTTTLSN---SISNGATSRASGIARWK-LRRLDLTGSKNLRELPDLST 647

Query: 579 NLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNC 614
            +   E +    K    IP S+++L  L  L   +C
Sbjct: 648 AVNFEELIIQGCKRLRNIPESIRRLHTLKKLNAIDC 683



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 8/81 (9%)

Query: 543 CSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQ 602
           CS  ++V      L  L+ +NL+    +  + ++I +L+ LE L+L   D + +P ++ Q
Sbjct: 793 CSNFQNVPC----LTELKLINLN----IHYISKDISHLQFLETLDLEGNDVKYLPQTLGQ 844

Query: 603 LSKLSDLRLQNCKRLQSLPEL 623
           L KL  L L+NC++L+ LP+L
Sbjct: 845 LPKLKYLSLRNCRQLRELPQL 865


>gi|105922710|gb|ABF81432.1| TIR-NBS-TIR-TIR-WRKY type disease resistance protein [Populus
           trichocarpa]
          Length = 1251

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 190/585 (32%), Positives = 310/585 (52%), Gaps = 94/585 (16%)

Query: 58  ISPSLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA- 116
           I P+L  AI+ S+ +++IFS  YA S+WCL++LVKI++   + G  V+PVFY VDPS+  
Sbjct: 41  IEPALWKAIKESRFTVIIFSRDYAPSQWCLDDLVKIVQCMKEMGHTVLPVFYDVDPSETY 100

Query: 117 ---------GYCPSLGWMGIF-DIPTSESVLIEGNVND-------------ISKKLSDLF 153
                     +  +L  + I+ D  ++ + L  G+V               IS KLS   
Sbjct: 101 EKAFVEHEQNFKENLENVQIWKDCLSTVTNLFGGDVRKRKESESIKIIAEYISYKLSVTL 160

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           P+ +K+ LVG++  ++ +   +     +   +GI G+GGIGKT +A   Y  I   FEGS
Sbjct: 161 PTISKN-LVGIDYRLEVLNGYIGEEVGKAIFIGICGMGGIGKTIVAKVYYDRIRWQFEGS 219

Query: 214 YFMQNIRDE-SEKVGG-------LANIHLN----FERRRLSRMKVLIVFY--------DL 253
            F+ N+R+  +EK G        L+ I +     ++  R   M    +          D+
Sbjct: 220 CFLANVREVFAEKDGPRRLQEQLLSEILMERASVWDSSRGIEMIKRRLRLKKILLILDDV 279

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSR 313
            D +Q++ L        PGSR+I+T RD +++    G+   +++E ++L+ +D+L LFS+
Sbjct: 280 DDKEQLEFLAEEPGWCGPGSRIIVTRRDKKVVT---GNNNYNIYEAEKLNDDDALMLFSQ 336

Query: 314 NAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDI 373
            AF  + PA  F+ELS  V+ YANG+PLAL+V+GS+L   S  EW  A+N++  +P   I
Sbjct: 337 KAFKNDQPAVDFVELSKHVVGYANGLPLALEVIGSFLYERSIHEWRGAINRMNEIPDGKI 396

Query: 374 QKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI 433
             VL++S+DG                                    IG+  L+ +SL+++
Sbjct: 397 IDVLRISFDG------------------------------------IGLPILIERSLISV 420

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSLPTGINLDSLKE 493
           S +++ M +LLQ MG EIVR ES ++ G+RSRLW  ED+   L ++TS    +N   LK 
Sbjct: 421 SRDQVWMDNLLQIMGKEIVRCESPEELGRRSRLWTYEDVCLALMDSTS---AVN---LKI 474

Query: 494 LYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVS 550
           + L    NL R P+++   N+E L L+  T++ ++  S+G+   L  ++L NC  ++ + 
Sbjct: 475 INLSNSLNLSRTPDLTGIPNLESLILEGCTSLSKIHPSLGSHKNLQYVNLVNCESIRILP 534

Query: 551 SRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEK 595
           S L  ++SL+   L GC KLEK P+ +GN+  L  L L E + ++
Sbjct: 535 SNL-EMESLKVFTLDGCSKLEKFPDVLGNMNCLMVLCLDETELKE 578



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 36/51 (70%)

Query: 66  IEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
            E S+ SI+IFS  YASS WCL ELVKI++   + G  V+PVFY VDPS+ 
Sbjct: 861 FEESRFSIIIFSRDYASSPWCLEELVKIVQCMKEKGHTVLPVFYNVDPSET 911



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
            D+FLSFRG D  ++F +HLN AL    I    DDK L +   I   L  AIE S +SI+
Sbjct: 645 EDLFLSFRGADTSNDF-THLNTALALRVI--IPDDKELEKVMAIRSRLLEAIEESGLSII 701

Query: 75  IFSEGYASSRWCLNELVKILESKNKY-GQIVVPVFYLVDPS 114
           IF+   AS  WC +ELVKI+   ++     V PV Y V+ S
Sbjct: 702 IFARDCASLPWCFDELVKIVGFIDEMRSDTVFPVSYHVEQS 742


>gi|255564934|ref|XP_002523460.1| hypothetical protein RCOM_1043710 [Ricinus communis]
 gi|223537288|gb|EEF38919.1| hypothetical protein RCOM_1043710 [Ricinus communis]
          Length = 371

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/350 (41%), Positives = 209/350 (59%), Gaps = 44/350 (12%)

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
            VG+ES I++IES L  G      VG+WG+GGIGK+T A  +Y  IS+ F+G+ F+ N+R
Sbjct: 12  FVGIESHIEKIESLLSIGPEAVRFVGVWGMGGIGKSTCAELVYHRISNKFDGTCFLANVR 71

Query: 221 DESEKVGG-------------LANIHLNFE---------RRRLSRMKVLIVFYDLTDLKQ 258
           +  EK                L +  +  E         +RRL RMKVLIV  D+ + +Q
Sbjct: 72  ENFEKEKDDPIPLLEKVISRILKDEKVKIETPNMLPESIKRRLQRMKVLIVLDDVNEARQ 131

Query: 259 IDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQ 318
           ++ L+G  + F  GSR+IIT+RD  +LK H+ + +  ++ V  LS  D+L LFS NAF Q
Sbjct: 132 MEYLVGNGNWFASGSRIIITSRDEHVLK-HKVNEL-RLYRVGGLSEVDALQLFSLNAFEQ 189

Query: 319 NHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQK--- 375
            +P   +L LS   I+YANG+PLAL+VLGS+L   S+E+WE A+  L +    D+QK   
Sbjct: 190 KYPLLDYLNLSKRAIRYANGLPLALKVLGSHLCKRSKEQWELALENLPK--SRDVQKNIL 247

Query: 376 -VLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS 434
            +L++SY+ L+  +++IFLD ACFFKG ++  V + L+ C  +A  GI+RLV K LV I 
Sbjct: 248 GILEISYEELEKSQKDIFLDIACFFKGEEKDRVESILNGCGLNASWGITRLVEKCLVDIV 307

Query: 435 NNKITMHDLLQEMGGEIVRQESIKDPGKR--SRLW---HPEDIYQVLNEN 479
           NNK+ MHDL+QEMG  I         GKR  SR++    PE++  +   N
Sbjct: 308 NNKLQMHDLIQEMGRNI---------GKRNLSRIYWESSPEELLNIFAAN 348


>gi|227438149|gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1084

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 222/749 (29%), Positives = 330/749 (44%), Gaps = 215/749 (28%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG DVR+ F+SHL  +L    I TF DD+ L +G  ISP L  AIE SKI +V
Sbjct: 14  YDVFLSFRGPDVRNGFLSHLYQSLVTSGIYTFKDDEELEKGESISPELRKAIENSKIHLV 73

Query: 75  IFSEGYASSRWCLNELVKILES-KNKYGQIVVPVFYLVDPSDA----------------- 116
           + SE YASS WCL+ELV ++   KN  G +V PVFY ++PS                   
Sbjct: 74  VLSESYASSSWCLDELVHMMRRLKNNPGHLVFPVFYKIEPSHVRRQSGPFGESFHKHRSR 133

Query: 117 --------------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLF--- 153
                               GY  S G         +++ L++    DI + L   +   
Sbjct: 134 HRESKLKQWRKALTSIANLKGYHSSNG--------DNDAELVDQLTRDILRVLPSSYLHL 185

Query: 154 PSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGS 213
           P+      VG+   +  I+  +  G  +   +GIWG+ GIG++                 
Sbjct: 186 PT----YAVGIRPRVGRIKELMCFGLDDVQIIGIWGMAGIGRS----------------- 224

Query: 214 YFMQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGS 273
            F++N RD  ++  G     L+ +++ LS +           L++ +     +D  V   
Sbjct: 225 -FLENFRDYFKRPDG----KLHLQKKLLSDI-----------LRKDEAAFNNMDHAVK-- 266

Query: 274 RVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVI 333
                    Q  +N R S        KEL+ +++L L S +AF  + P   FL+    ++
Sbjct: 267 ---------QRFRNKRSS-----LTPKELNADEALDLVSWHAFRSSEPPEEFLQFPKRLV 312

Query: 334 KYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFL 393
           +Y  G+PLA++VLG++L   S  EW+S +  LKR+P  +IQ  L++S+D L+  +++IFL
Sbjct: 313 EYCGGLPLAMEVLGAFLYKRSVSEWKSTLKALKRIPDDNIQAKLQISFDALNALQKDIFL 372

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVR 453
           D +CFF G D+  V   LD C      G+  L  + L+TI +N++ MHDLL++MG  IV+
Sbjct: 373 DISCFFIGMDKDYVDCILDGCELEPVAGLKVLKERCLITIHDNRLMMHDLLRDMGRYIVQ 432

Query: 454 ---QESIKDPGKRSRLWHPEDIYQVLNENTS-------------LPTGINLDSLKELYLG 497
              ++ +K+  K SRLW    +  VL EN S             L     + +++ L + 
Sbjct: 433 GTSKKHVKNRVKWSRLWDRVHVIDVL-ENYSGTDANHPNHAIEGLSLKAEVTAVENLEVK 491

Query: 498 GCSNLKR-----------------------------FPEISCNIEDLDLKETAIEELPSS 528
             SNL+R                             FPE S  I +L L+   + ++ +S
Sbjct: 492 AFSNLRRLRLLQLSHVVLNGSYENFPKGLRWLCWLGFPEESIPI-NLHLRSLVVMDMQNS 550

Query: 529 IGNLSRLVD------------LDLTNCSGLKSVS--SRLCNLKSL-----RRL------- 562
             NL RL D            LDL++   L      S L NL+ L     +RL       
Sbjct: 551 --NLKRLWDQKPHDSLKELKYLDLSHSIQLTETPDFSYLPNLEKLFLINCQRLAKVHESI 608

Query: 563 ----------NLSGCLKLEKLPEE------------------------IGNLESLEYLNL 588
                     NLSGC+KL +LP E                        +G LESL  L  
Sbjct: 609 KVLQGSLILLNLSGCIKLGELPLELYTLKLLETLILSGCSQLERLDDALGELESLTILKA 668

Query: 589 AEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
                 +IPSS  QL +LS   L  CK L
Sbjct: 669 DYTAITQIPSSSDQLKELS---LHGCKEL 694



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 23/196 (11%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKE---TAIEELPSSIGNLSRLV------- 536
            L  L+ L L GCS L+R  +    +E L + +   TAI ++PSS   L  L        
Sbjct: 635 TLKLLETLILSGCSQLERLDDALGELESLTILKADYTAITQIPSSSDQLKELSLHGCKEL 694

Query: 537 --DLDLTNCSGLKSVSS----RLCNLKSLRRLNLSGC-LKLEKLPEEIGNLESLEYLNLA 589
             D   TN      V+      L  L  LR L L  C L  E +P  +G+L SLE L+L 
Sbjct: 695 WKDRQYTNSDESSQVALLSPLSLNGLICLRTLRLGYCNLSDELVPVNLGSLSSLEELDLQ 754

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTLLT 648
             +F  + +    L  L  L+L NC  L+S+  LP    S++AR+CT L+   +      
Sbjct: 755 GNNFRNLQTDFAGLPSLQILKLDNCSELRSMFSLPKKLRSLYARNCTVLERTPDLKECSV 814

Query: 649 RSSKHWDIFNFSNCSN 664
             S H      +NC N
Sbjct: 815 LQSLH-----LTNCYN 825


>gi|15234300|ref|NP_195337.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
 gi|2961373|emb|CAA18120.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|7270566|emb|CAB81523.1| putative disease resistance protein [Arabidopsis thaliana]
 gi|332661224|gb|AEE86624.1| putative TIR-NBS-LRR class disease resistance protein [Arabidopsis
            thaliana]
          Length = 1607

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 206/683 (30%), Positives = 325/683 (47%), Gaps = 87/683 (12%)

Query: 27   VRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIFSEGYASSRWC 86
            ++++F SHL+    R+ I  F++         S +L   IE    S+++FS+   SS  C
Sbjct: 446  LQYSFASHLSMDFRRKGISAFVN--------YSETLD-VIERVSASVLVFSKSCVSSTSC 496

Query: 87   LNELVKILESKNKYGQIVVPVFYLVDPSDAGYCP----------SLGWMGIFDIP----- 131
            L+ LV++ + + K GQ+VVPV+Y +  SD               S     + ++P     
Sbjct: 497  LDMLVRVFQCRRKTGQLVVPVYYGISSSDVVVQEHKSVDRIREWSSALQELRELPGHHNR 556

Query: 132  --TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWG 189
               SES L+E  V D+ +K   LFP++     +G+ S + E+E  L         +GIWG
Sbjct: 557  EECSESELVEEIVKDVHEK---LFPTEQ----IGINSRLLEMEHLLCKQPWGVRRIGIWG 609

Query: 190  IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANI---HL------------ 234
            + GIGKTT+A A +  IS  +E S F+++  D++    GL  +   H             
Sbjct: 610  MPGIGKTTLAKAFFDQISGGYEASCFIKHF-DKAFSGKGLHRLLEEHFGKILKELPRVCS 668

Query: 235  -----NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR 289
                 +  R +LS+ + L+V  D+ +    +  +     F PGS +IIT+RD Q+    R
Sbjct: 669  SITRPSLPRDKLSKKRTLVVLDDVHNPLVAESFLEGFHWFGPGSLIIITSRDKQVF---R 725

Query: 290  GSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSY 349
              ++ HV+EV+  + N++L LFS+ AF ++      LELS  VI YA+G PLAL      
Sbjct: 726  LCQINHVYEVQSFNENEALQLFSQCAFRRDINEQNLLELSLKVIDYASGNPLALSFYCRV 785

Query: 350  LKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMN 409
            LKG    E E+   KLK+     I  + K SY+ LDD E+NIFLD ACFF G +   VM 
Sbjct: 786  LKGKELSEMETTFFKLKQRTPYKIFDLFKSSYETLDDNEKNIFLDIACFFSGENVDYVMR 845

Query: 410  FLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHP 469
             L+ C F   +GI  LV   LVTIS N++ MH ++Q+ G EI+  E+++   +R RL  P
Sbjct: 846  LLEGCGFFPHVGIDVLVENCLVTISENRVKMHRIIQDFGREIIDGETVQIE-RRRRLSDP 904

Query: 470  EDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIED--LDLKETAIEELPS 527
              I + L E+  L    +  +     LG           + +IE   LD      +  P 
Sbjct: 905  WSI-KFLLEDDELEANEDPKATYTRTLG-----------TEDIEGILLDTSNLTFDVKPG 952

Query: 528  SIGNLSRLVDLDLTNCSGLKSVSSRLCN-LK----SLRRLNLSGCLKLEKLPEEIGNLES 582
            +  N+  L  L +   S     S RL   LK     LR L+      L+ LP++      
Sbjct: 953  AFENMLSLRFLKIYCSSYENHYSLRLPKGLKFLPDELRLLHWEN-YPLQSLPQDFDPCHL 1011

Query: 583  LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIH---ARHCTSLKT 639
            +E LNL+    +K+ +  K L  L  ++L + ++L ++ ++    +I     + C  L+ 
Sbjct: 1012 VE-LNLSYSQLQKLWAGTKSLEMLKVVKLCHSQQLTAIDDILKAQNIELIDLQGCRKLQR 1070

Query: 640  LSNSSTLLTRSSKHWDIFNFSNC 662
               +  L     +H  + N S C
Sbjct: 1071 FPATGQL-----QHLRVVNLSGC 1088



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 63/102 (61%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIV 74
           +H+VF SF   DV  +F+S +   L R+  E  ID++  R   I P L +AI  S+I IV
Sbjct: 49  EHNVFSSFSSVDVPKSFLSRIRKELRRKGFEPLIDNETERCVSIGPELRNAISVSRIVIV 108

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA 116
           + S  YA S WCL+ELV+I++ K + GQ VV +FY +DP D 
Sbjct: 109 VLSRNYALSPWCLDELVEIMKCKEELGQRVVTIFYNLDPIDV 150



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 37/204 (18%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLD-- 539
             P    L  L+ + L GC  +K FPE+S NIE+L L+ T I ELP SI +L     L+  
Sbjct: 1071 FPATGQLQHLRVVNLSGCREIKSFPEVSPNIEELHLQGTGIRELPISIVSLFEQAKLNRE 1130

Query: 540  ----LTNCSG------------LKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESL 583
                L   SG            L  + +   NL  L  LN+  C+ L KLP  + + ESL
Sbjct: 1131 LFNLLPEFSGVSNAWNNEQSTSLAKLVTSTQNLGKLVCLNMKDCVHLRKLPYMV-DFESL 1189

Query: 584  EYLNLAE----KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLK 638
            + LNL+      D E  P ++K+L  +S         L+ LP+LP    + +A  C SL 
Sbjct: 1190 KVLNLSGCSDLDDIEGFPPNLKELYLVS-------TALKELPQLPQSLEVLNAHGCVSLL 1242

Query: 639  TLSNSSTLLTRSSKHWDIFNFSNC 662
            ++ ++   L R       + FSNC
Sbjct: 1243 SIPSNFERLPR------YYTFSNC 1260



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 23/178 (12%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           E  +++   NDIS  +++   S     LVG+E+ +++++  L   S +   +GI G+ G 
Sbjct: 241 EKAMVKKIANDISSIMNNSTQSSASQGLVGMEAHMEKMKELLGLDSNKVRLIGICGLPGS 300

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIR--------DESEKVGGLAN-------------- 231
           GKTTIA  +Y  +   FE S  + +I+        +E ++   L +              
Sbjct: 301 GKTTIAKRLYQQLLPQFELSTIIIDIKGCYPRTCYNEDDRKLQLQSHLLSQLLNHKFTGE 360

Query: 232 -IHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
            + L      L   KV++V  D+  + Q+D L      F PGSR+IITT+D +LL+  
Sbjct: 361 ILQLEAAHEMLKDKKVVLVLDDVDSIGQLDALANEARWFGPGSRIIITTQDQRLLEEQ 418



 Score = 38.9 bits (89), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LP  ++ +SLK L L GCS+L        N+++L L  TA++ELP    +L     L+  
Sbjct: 1180 LPYMVDFESLKVLNLSGCSDLDDIEGFPPNLKELYLVSTALKELPQLPQSLEV---LNAH 1236

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKL 570
             C  L S+ S    L   R    S C  L
Sbjct: 1237 GCVSLLSIPSNFERLP--RYYTFSNCFAL 1263


>gi|297790450|ref|XP_002863115.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308939|gb|EFH39374.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1222

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 211/723 (29%), Positives = 313/723 (43%), Gaps = 188/723 (26%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVI 75
           H VF SFRG+DVR +F+SH+     R  I  FID+++ RG  I P L  AI  SKI+I++
Sbjct: 63  HHVFPSFRGEDVRRDFLSHIQMEFQRMGITPFIDNEIKRGQSIGPELIRAIRESKIAIIL 122

Query: 76  FSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSD-------------------- 115
            S  YASS WCL+EL +I++ + + GQ V+ VFY VDPSD                    
Sbjct: 123 LSRNYASSSWCLDELAEIMKCREELGQTVLAVFYKVDPSDVKKLTGDFGKVFKKTCAGKT 182

Query: 116 -----------------AGYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNK 158
                            AGY  S  W        +E+ +I+    DIS  L++   S + 
Sbjct: 183 KEHVGRWRQALANVATIAGY-HSTNW-------DNEAAMIKKIATDISNMLNNSASSSDF 234

Query: 159 DQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQN 218
           D LVG+   ++++E  L   S E   +GIWG  GIGKTTIA  IY+ +S  F+ S FM++
Sbjct: 235 DGLVGMREHLEKMEPLLCLDSDEVRLIGIWGPSGIGKTTIARVIYNKLSGSFQLSVFMES 294

Query: 219 I-----RDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGS 273
           I     R  S+       +   F    L   KVL+V   +    Q+D +      F PGS
Sbjct: 295 IEAKYTRPCSDDYSAKLQLQQQF---MLKDKKVLVVLDGVDQSMQLDAMAKETWWFGPGS 351

Query: 274 RVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVI 333
           R+IITT+D +L + H    + H+++V   S  ++L +  + AFGQN P  GF EL+  V 
Sbjct: 352 RIIITTQDRKLFRAH---GINHIYKVDFPSTEEALQILCKYAFGQNSPTHGFEELAWEVT 408

Query: 334 KYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFL 393
           + A  +PLAL                                      DG+D   Q   +
Sbjct: 409 QLAGELPLAL--------------------------------------DGVDKSMQLDAM 430

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVR 453
               ++ G    +++   D   F   I                   MHDLL ++G +IVR
Sbjct: 431 VKETWWFGPGSRIIITTQDRKLFRGYIN------------------MHDLLVKLGIDIVR 472

Query: 454 QESIKDPGKRSRLWHPEDIYQVLN---ENTSLPTGINL----DSLKE-LYLG-----GCS 500
           ++S+++PG+R  L    +I +VLN     +    GIN     D +KE L++      G S
Sbjct: 473 KQSLREPGQRLFLVDAREICEVLNLDANGSRSVIGINYNFGEDRIKEKLHISERAFQGMS 532

Query: 501 NLK------------------------------RFPEISC--------NIEDLDLKETAI 522
           NL+                               FP ++C         + +LD++ + +
Sbjct: 533 NLQFLRFEGNNNTLHLPHGLEYISRKLRLLHWTYFP-MTCLPPIFNTDFLVELDMRCSKL 591

Query: 523 EELPSSIGNLSRLVDLD-----------------------LTNCSGLKSVSSRLCNLKSL 559
           E+L   I  L  L  +D                       L+ CS L    S +   K+L
Sbjct: 592 EKLWEGIKPLPNLKRMDLRSSLLLKELPDLSTATNLQKLNLSGCSSLVKPPSTIGYTKNL 651

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           R+L L GC  L +L   IGNL +L+ L+L+      ++P S+   + L  L L  C  L 
Sbjct: 652 RKLYLGGCSSLVELSFSIGNLINLKELDLSSLSCLVELPFSIGNATNLRKLNLDQCSSLV 711

Query: 619 SLP 621
            LP
Sbjct: 712 ELP 714



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 18/189 (9%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEIS---CNIEDLDLKE-TAIEELPSSIGNLSRLV 536
           LP  I N  +L++L L  CS+L   P       N+++LDL   + + ELPSSIGNL  L 
Sbjct: 689 LPFSIGNATNLRKLNLDQCSSLVELPSSIGNLINLKELDLSSLSCMVELPSSIGNLINLK 748

Query: 537 DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD-FEK 595
           +LDL++ S L  + S + N   L  L+L GC  L +LP  IGNL +L+ LNL+      +
Sbjct: 749 ELDLSSLSCLVELPSSIGNATPLDLLDLGGCSSLVELPFSIGNLINLKVLNLSSLSCLVE 808

Query: 596 IPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHWD 655
           +P S+   + L DL L+ C  L+         +++ R C+ L+ L  +  L +       
Sbjct: 809 LPFSIGNATNLEDLNLRQCSNLKL-------QTLNLRGCSKLEVLPANIKLGSLRK---- 857

Query: 656 IFNFSNCSN 664
             N  +CSN
Sbjct: 858 -LNLQHCSN 865



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 80/163 (49%), Gaps = 28/163 (17%)

Query: 482  LPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLT 541
            LP  I L+SL  L L  C  LKRFPEIS N+E L LK T IEE+PSSI + SRL  L + 
Sbjct: 893  LPANIKLESLCLLDLTDCLLLKRFPEISTNVETLYLKGTTIEEVPSSIKSWSRLTYLHM- 951

Query: 542  NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMK 601
                  S S  L N                         + +  L +   + +++P  +K
Sbjct: 952  ------SYSENLMNFPH--------------------AFDIITRLYVTNTEIQELPPWVK 985

Query: 602  QLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
            + S L +L L+ CK+L SLP++P   + I A  C SL+ L  S
Sbjct: 986  KFSHLRELILKGCKKLVSLPQIPDSITYIDAEDCESLEKLDCS 1028



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)

Query: 475 VLNENTSLPTGINLDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKE-TAIEELPSSIG 530
           +L E   L T  NL   ++L L GCS+L + P     + N+  L L   +++ EL  SIG
Sbjct: 614 LLKELPDLSTATNL---QKLNLSGCSSLVKPPSTIGYTKNLRKLYLGGCSSLVELSFSIG 670

Query: 531 NLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE 590
           NL  L +LDL++ S L  +   + N  +LR+LNL  C  L +LP  IGNL +L+ L+L+ 
Sbjct: 671 NLINLKELDLSSLSCLVELPFSIGNATNLRKLNLDQCSSLVELPSSIGNLINLKELDLSS 730

Query: 591 KD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                ++PSS+  L  L +L L +   L  LP
Sbjct: 731 LSCMVELPSSIGNLINLKELDLSSLSCLVELP 762



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 33/163 (20%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETA-IEELPSSIGNLSRLVDLD 539
           LP  I N  +L++L L  CSNLK        ++ L+L+  + +E LP++I  L  L  L+
Sbjct: 809 LPFSIGNATNLEDLNLRQCSNLK--------LQTLNLRGCSKLEVLPANI-KLGSLRKLN 859

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLES----------------- 582
           L +CS L  +   + NL+ L+ L L GC KLE LP  I  LES                 
Sbjct: 860 LQHCSNLVKLPFSIGNLQKLQTLTLRGCSKLEDLPANI-KLESLCLLDLTDCLLLKRFPE 918

Query: 583 ----LEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
               +E L L     E++PSS+K  S+L+ L +   + L + P
Sbjct: 919 ISTNVETLYLKGTTIEEVPSSIKSWSRLTYLHMSYSENLMNFP 961


>gi|298204609|emb|CBI23884.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 213/633 (33%), Positives = 309/633 (48%), Gaps = 117/633 (18%)

Query: 94  LESKNKYGQIVVPVFYLVDPSD------------AGYCPSLGWMGIFDIPTSESVLIEG- 140
           +E +     +V P+FY VDPS             AGY     W     IP     L E  
Sbjct: 1   MECQKDPAHVVFPIFYHVDPSHVRKQEGSFGEAFAGY--EENWKD--KIPRWRRALTEAA 56

Query: 141 -----------NVNDISKKLSDLFPS------DNKDQLVGVESIIKEIESQLLSGSTEFN 183
                        N I +  +++F        D    LVG+ S +KE+  +L   S++  
Sbjct: 57  NLSGWHILDGYESNQIKEITNNIFRQLKCKRLDVGANLVGIGSRVKEMILRLHMESSDVR 116

Query: 184 TVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVG--------------GL 229
            VGI G+GGIGKTTIA  +Y+ +S  FE   F++NI + S   G              G 
Sbjct: 117 IVGICGVGGIGKTTIAKVVYNELSCEFECMSFLENIGEVSNTQGLSHLQNQLLVDVLEGE 176

Query: 230 ANIHLNFERRR-------LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDV 282
            + ++N    +       LS  +VL+V  D+    Q++ L+G  +    GSRVIITTR+ 
Sbjct: 177 VSQNMNGVAHKASMIKDILSSKRVLMVLDDVDHPSQLEYLLGHREWLGEGSRVIITTRNK 236

Query: 283 QLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLA 342
            +L   +   V +++EVK L++ +   LFS  AF QN P + +  L+  V+ Y  G+PLA
Sbjct: 237 HVLAVQK---VDNLYEVKGLNFEEDCELFSLYAFKQNLPKSDYRNLACRVVGYCQGLPLA 293

Query: 343 LQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGN 402
           L+VLGS L   +  EWES ++KL R P  +I  VLK SYDGLD  E+NIFLD ACFFKG 
Sbjct: 294 LKVLGSLLFNKTIPEWESELHKLDREPEAEIHNVLKRSYDGLDRTEKNIFLDVACFFKGE 353

Query: 403 DQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGK 462
           D+  V   LD C F AK GI  L  K L+T+  N+I MHDL+Q MG EIVR++   +P K
Sbjct: 354 DRDFVSRILDGCDFHAKRGIRNLNDKCLITLPYNEIRMHDLIQHMGWEIVREKFPDEPNK 413

Query: 463 RSRLWHPEDIYQVLN--------ENTSL----PTGI------------------------ 486
            SRLW P D  + L         E  SL      G+                        
Sbjct: 414 WSRLWDPCDFERALTAYEGIKRVETISLDLSKSKGVCVSSNVFAKTTRLRLLKVHSGFHI 473

Query: 487 -----NLDSLKELY-----LGGCSNLK-----RFPEISCNIEDLDLKETAIEELPSSIGN 531
                +LDS +E+Y     +   S ++     +FP  S  +  L      ++ LPS+   
Sbjct: 474 DHKYGDLDSEEEMYYCYGVIAHASKMQLDRGFKFP--SYELRYLCWDGYPLDFLPSNFDG 531

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE--EIGNLESLEYLNLA 589
             +LV+L L +CS +K +     +L+ L+ ++LS   KL ++ E   + NLESL +LN  
Sbjct: 532 -GKLVELHL-HCSNIKRLWLGNKDLERLKVIDLSYSRKLIQMSEFSRMPNLESL-FLNGC 588

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
               +  P S+  L KL+ L L++C +L++LP+
Sbjct: 589 VSLIDIHP-SVGNLKKLTTLSLRSCDKLKNLPD 620



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 26/167 (15%)

Query: 482 LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELPSSIGNLSRLVD 537
           LP  I +L+SL+ L L  CS  ++FPE   N++ L+   L+ TAI++LP SIG+L  L  
Sbjct: 665 LPDSIGDLESLEILDLSDCSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLES 724

Query: 538 LDLTNC----------------------SGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE 575
           LD++                        + +K +   + +L+SL  L+LS C K EK PE
Sbjct: 725 LDVSGSKFEKFPEKGGNMKSLNQLLLRNTAIKDLPDSIGDLESLESLDLSDCSKFEKFPE 784

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           + GN++SL+ L L     + +P S+  L  L  L L +C + +  PE
Sbjct: 785 KGGNMKSLKKLRLRNTAIKDLPDSIGDLKSLEFLDLSDCSKFEKFPE 831



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 31/174 (17%)

Query: 474 QVLNENTS---LPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLD---LKETAIEELP 526
           Q+L  NT+   LP  I +L+SL+ L + G S  ++FPE   N++ L+   L+ TAI++LP
Sbjct: 701 QLLLRNTAIKDLPDSIGDLESLESLDVSG-SKFEKFPEKGGNMKSLNQLLLRNTAIKDLP 759

Query: 527 SSIGNLSRLVDLDLTNCS-----------------------GLKSVSSRLCNLKSLRRLN 563
            SIG+L  L  LDL++CS                        +K +   + +LKSL  L+
Sbjct: 760 DSIGDLESLESLDLSDCSKFEKFPEKGGNMKSLKKLRLRNTAIKDLPDSIGDLKSLEFLD 819

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRL 617
           LS C K EK PE+ GN++ L  L+L     + +P+++ +L KL  L L +C  L
Sbjct: 820 LSDCSKFEKFPEKGGNMKRLRELHLKITAIKDLPTNISRLKKLKRLVLSDCSDL 873



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 5/124 (4%)

Query: 500 SNLKRFPEISCNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKS 558
           S   R P    N+E L L    ++ ++  S+GNL +L  L L +C  LK++   + +L+S
Sbjct: 572 SEFSRMP----NLESLFLNGCVSLIDIHPSVGNLKKLTTLSLRSCDKLKNLPDSIWDLES 627

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           L  LNLS C K EK P + GN++SL  L+L +   + +P S+  L  L  L L +C + +
Sbjct: 628 LEILNLSYCSKFEKFPGKGGNMKSLRKLHLKDTAIKDLPDSIGDLESLEILDLSDCSKFE 687

Query: 619 SLPE 622
             PE
Sbjct: 688 KFPE 691


>gi|297794769|ref|XP_002865269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311104|gb|EFH41528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 711

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 207/661 (31%), Positives = 318/661 (48%), Gaps = 72/661 (10%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-------LNRGNEISPSLSSAIEG 68
           +DVF+ +  KD RH+FVSHL+AA  R  I  F+ +        L  G E++  +  AIE 
Sbjct: 9   YDVFIDYSSKDTRHSFVSHLHAAFGRRGISVFLAEHCTLSEATLKPGFELANEIQLAIER 68

Query: 69  SKISIVIFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFY------------------ 109
           SKI +V+FS+ YASS  CL  L+  ++  + K G +V+PVFY                  
Sbjct: 69  SKIYVVVFSKNYASSPLCLETLMTFMDLQRRKDGPVVIPVFYGDVTRSIVEQQTERFKED 128

Query: 110 -------LVDPSD------AGYCPSLGWMGIFDIPT-SESVLIEGNVNDISKKLSDLFPS 155
                    D  D       G   +    G   I   ++S L+E  V D+ ++L    P+
Sbjct: 129 FSKHRGFFSDEKDRVERWRKGLTEAAKLHGHESIEQQNDSELVEDIVADVRERLC---PT 185

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYF 215
                ++G  S +  IE+ L   S +   +GIWG+ GIGKT I+   ++ ++ HFE   F
Sbjct: 186 G----MIGFYSRLLGIENLLFKQSHDIYRLGIWGMPGIGKTAISQESFNQMTKHFETQCF 241

Query: 216 MQNIRDESEKVGGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDG-FVPGSR 274
           +Q+         GL  +   +   +L   +VL+V  D+ +    +  +G  D  F P S 
Sbjct: 242 IQDFHVAFND-KGLYVLREEYLIDKLREKRVLVVLDDVRNPMDAESFLGGFDHCFGPESL 300

Query: 275 VIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA-AGFLELSNIVI 333
           +II++RD Q+L      +V  V+E+  L+  ++  LF+R AF +  P+    +E+S  V+
Sbjct: 301 MIISSRDKQVLHQ---CQVDSVYEIPALNKKEAQRLFTRFAFSEKEPSDTNLIEVSKKVV 357

Query: 334 KYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFL 393
           +YA+G PLAL   G  L     EE  +   K+K+ P  +I  V K SYD L + E++IFL
Sbjct: 358 EYADGNPLALCHYGRELGKKKPEEVVAEFEKIKQSPPREIMHVFKSSYDELSENERSIFL 417

Query: 394 DTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKITMHDLLQEMGGEIV 452
           D A FF G +   VM  L+ C F   +GI RLV +SL+ IS NN + M  L+Q++   IV
Sbjct: 418 DIAFFFNGENLDYVMRILEGCGFFPHVGIDRLVERSLLMISKNNNVEMQILIQDIARNIV 477

Query: 453 RQESIKDPGKRSRLWHPEDIYQVLNEN----TSLPTGINLDSLKELYLGGCSNLKRFPEI 508
            +E  +    R RLW P  I   L EN    T +  GI LD+ K   L    N K F E 
Sbjct: 478 NEEKNQITRHR-RLWDPSIIKSFLEENKPKGTEVIEGIFLDTTK---LTVDVNPKAF-EN 532

Query: 509 SCNIEDLDLKETAIE-----ELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLN 563
             N+  L +  +  E      LP  + +L   + L       L+S      + + L  LN
Sbjct: 533 MYNLRLLKIYSSNSESTQEFHLPKGLRSLPYELRLLHWEKYPLRSFPEDF-DPRHLVELN 591

Query: 564 LSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPE 622
           +     L+ L E   +L  L+ +NL+  +   ++   +K  S L  + LQ C  L+S+P 
Sbjct: 592 MPYS-HLQNLWEGTKSLVKLKIINLSHSQQLVEVDVLLKACS-LEQIHLQGCTSLESIPH 649

Query: 623 L 623
           +
Sbjct: 650 I 650


>gi|399920218|gb|AFP55565.1| TIR-NBS-LRR [Rosa rugosa]
          Length = 1024

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 208/675 (30%), Positives = 321/675 (47%), Gaps = 92/675 (13%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISI 73
           K+DVFLSFRG+D R  F  +L   L R+ I TF DD +L RG  ISP L +AIE S    
Sbjct: 18  KYDVFLSFRGEDTRKGFTDYLYKELQRQGIRTFRDDPQLERGTAISPELLTAIEQSS--- 74

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIPTS 133
             F+E +        E  K +E    +   +  V  L   +   Y               
Sbjct: 75  --FAEAFQEHEEKFGEANKEVEG---WRDALTKVASLAGWTSKDY-------------RY 116

Query: 134 ESVLIEGNVNDISKKL-SDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGG 192
           E+ LI   V  + KK+   L    +  +LVG+++ ++EI+  L   + +   +GIWG+GG
Sbjct: 117 ETELIREIVQALCKKVHPSLTVCGSSGKLVGMDAKMEEIDVLLDKEANDVRFIGIWGMGG 176

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGL--------------------ANI 232
           IGKT++A+ +Y  IS  F+   F+ ++R  S   G +                     N 
Sbjct: 177 IGKTSLATLVYEKISHEFDVCIFLDDVRKASADHGLVYLQKQILSQLLTEENVLVWNVNG 236

Query: 233 HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
            +   +R +    VL V  ++   +Q++ L+G  D F   SR+IITTR+  +L  H    
Sbjct: 237 GITMIKRCVCNKAVLPVLDNVDQSEQLENLVGDKDWFGLRSRIIITTRNRHVLVTHG--- 293

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           +   +EV+ L+  ++L LFS  AFG+  P   +  LS+  + +  G+PLAL+ LGS+L  
Sbjct: 294 IEEPYEVRGLNKAEALQLFSLKAFGKYEPDEDYAMLSHRFVNHVGGLPLALKTLGSFLCK 353

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
              + W S   KLK  P+  +  VLKVSYDGLD+ ++  FLD ACF    +   ++  L 
Sbjct: 354 RRLDAWNSEWAKLKNTPNEKVFDVLKVSYDGLDEMQKKTFLDIACFSSQCEAKFIIELLY 413

Query: 413 ACRFSAKIGISRLVGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           +      I I  LV +SL+TI SNN+I MHDL++EMG EIVRQ+S ++PG RSRLW   D
Sbjct: 414 SYDVCTGIAIEVLVERSLLTISSNNEIGMHDLIREMGCEIVRQQSPEEPGGRSRLWLRND 473

Query: 472 IYQVLNEN--TSLPTGINL---------------------------------------DS 490
           I+ V  +N  T +  GI L                                       D+
Sbjct: 474 IFHVFTKNTGTEVTEGIFLHLYELQEADWNPKAFSKMCNLKLLYIHNLRLSLGPKFLPDA 533

Query: 491 LKELYLGGCSNLKRFPEISCN-IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV 549
           L+ L   G  +    P+   + + +L L  + I+ L + I +L  L  +DL+    L+  
Sbjct: 534 LRILKWSGYPSKSLPPDFQPDELTELSLVHSNIDHLWNGIKSLVNLKSIDLSYSRNLRR- 592

Query: 550 SSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSD 608
           +     + +L +L L GC  L ++   I  L+ L+  N    K  + +PS +  +  L  
Sbjct: 593 TPNFTGIPNLEKLVLEGCTNLVEIHPSIALLKRLKIWNFRNCKSIKSLPSEV-NMEFLET 651

Query: 609 LRLQNCKRLQSLPEL 623
             +  C +L+ +PE 
Sbjct: 652 FDVSGCSKLKIIPEF 666



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 38/211 (18%)

Query: 462 KRSRLWHPEDIYQVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLD---LK 518
           KR ++W+  +   +     SLP+ +N++ L+   + GCS LK  PE    ++ L    L 
Sbjct: 624 KRLKIWNFRNCKSI----KSLPSEVNMEFLETFDVSGCSKLKIIPEFVGQMKRLSKLYLN 679

Query: 519 ETAIEELPSSIGNLSR-LVDLDLTNC----------------------------SGLKSV 549
            TA+E+LPSSI +LS  LV+LDL+                                L  +
Sbjct: 680 GTAVEKLPSSIEHLSESLVELDLSGIVIREQPYSLFLKQNLVVSSFGLFPRKSPHPLIPL 739

Query: 550 SSRLCNLKSLRRLNLSGCLKLE-KLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSD 608
            + L +  SL +L L+ C   E  +P +IG+L SL  L L   +F  +P+S+  LSKL  
Sbjct: 740 LASLKHFSSLMQLKLNDCNLCEGDIPNDIGSLSSLRRLELRGNNFVSLPASIHLLSKLRY 799

Query: 609 LRLQNCKRLQSLPELPC-GSSIHARHCTSLK 638
           + ++NCKRLQ LPEL   G      +CTSL+
Sbjct: 800 INVENCKRLQQLPELSAIGVLSRTDNCTSLQ 830


>gi|227438183|gb|ACP30581.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1232

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 199/683 (29%), Positives = 330/683 (48%), Gaps = 121/683 (17%)

Query: 17  DVFLSF-RGKD-VRHNFVSHLNAALCREKIETFI------DDKLNRGNEISPSLSSAIEG 68
           +V++SF R +D VR++F+SHL+AA  R  I ++I       D L++G+         +E 
Sbjct: 3   EVYISFDRCEDKVRYSFISHLSAAFHRRGISSYIGGSDPKSDGLSKGD---------MEK 53

Query: 69  SKISIVIFSEGYASSRWCLNELVKILESK-NKYGQIVVPVFYLVDPSDAGYCPSLGW--- 124
           SK  +V+FSE Y+SS+ CL ELVK+ E + N+ G  VVPVFY    S       L W   
Sbjct: 54  SKACVVVFSEKYSSSKPCLEELVKVSERRGNEGGHAVVPVFYRATKSSVK---KLIWKSS 110

Query: 125 ----------MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQ 174
                     + + D+P  ES + +   + + + ++D+    N  + +GV   +  IE+ 
Sbjct: 111 DLTSERRSALLEVVDLPGHESYVTQSESDLVEEIVADVREKLNTTENIGVYPKLLRIENL 170

Query: 175 LLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIHL 234
           L         +G+WG+ GIGKTT+A AI+  +S  +E S F+++   +  + G    +  
Sbjct: 171 LQPCGV--CRIGLWGMAGIGKTTLAEAIFDQMSGGYEASCFIKDFNKKFHEKGLHCLLEE 228

Query: 235 NFE-------------------RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRV 275
           +F                    R  L + +VL+V  D+      +L +G  + F PGS +
Sbjct: 229 HFGKTLREEFGVNSLITRPVLLRNVLGQKRVLVVLDDVRKALDAELFLGGFNWFCPGSLI 288

Query: 276 IITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKY 335
           IIT+RD Q+       +V  ++EV  L+ +++  LFSR AFG++       +L   VI+Y
Sbjct: 289 IITSRDKQVFSL---CQVKQIYEVPGLNEDEAQQLFSRFAFGKDIKHENLQKLLPKVIEY 345

Query: 336 ANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
           A+G PLAL+  G   +  + +E E+A   L++ P  +I   +K +YD L   E+NIFLD 
Sbjct: 346 ADGNPLALKYYGRKTRD-NPKEVENAFLTLEQSPPHEIYDAVKSTYDLLSSNEKNIFLDI 404

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQE 455
            C F+G     VM+ L+ C F  ++GI+ LV K LV+IS  K+ MH+L+Q++G +I+ + 
Sbjct: 405 VCLFRGESIDYVMHLLEGCGFFPRVGINVLVEKCLVSISQGKVVMHNLIQDIGRKIINRR 464

Query: 456 SIKDPGKRSRLWHPEDIYQVLNENTSLPT----GINLDS------LKEL---------YL 496
                 +RSRLW P  I   L +   L +     I+LD+      L  +         YL
Sbjct: 465 K-----RRSRLWKPSSIKHFLEDKNVLGSEDIEAISLDTSDLNFDLNPMAFEKMYNLRYL 519

Query: 497 GGCS-------------------------NLKRFPEISC-------NIEDLDLKETAIEE 524
             CS                         + + FP +S        N+  L++  + ++ 
Sbjct: 520 KICSSKPGSYSTIHLPKGLKSLPDELRLLHWENFPLLSLPQGFDPRNLVILNMCSSKLQR 579

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLE 584
           L      L  L  + L +   L  +   L N +++  ++L GC +LE+   + G+   L 
Sbjct: 580 LWEGTKELEMLKRIKLCHSRKLVDI-QELQNARNIEVIDLQGCTRLERFI-DTGHFHHLR 637

Query: 585 YLNLAE----KDFEKIPSSMKQL 603
            +NL+     K F K+P  +++L
Sbjct: 638 VINLSGCINIKVFPKVPPKIEEL 660



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 109/235 (46%), Gaps = 63/235 (26%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISC--NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCS 544
            L SL  L L GCS L+   +++   N+E+L L  TAI+E+PSSI  LS LV LDL NC 
Sbjct: 771 TLTSLAVLNLSGCSELEDIEDLNLPRNLEELYLAGTAIQEVPSSITYLSELVILDLQNCK 830

Query: 545 GLKSVSSRLCNLKSLRRL------------------------------------------ 562
            L+ +   + NLKSL  L                                          
Sbjct: 831 RLRRLPMEISNLKSLVTLKLPRLFTVETGMSNLISAFNENVCQRQDYLPQPRLLPSSRLL 890

Query: 563 -----------NLSGC-LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLR 610
                      +LS C   L  +PEEI +L ++  L+L+   F KIP S+KQL KL  LR
Sbjct: 891 HGLVPRFYALVSLSLCNASLMHIPEEICSLATVTVLDLSRNGFRKIPESIKQLCKLHSLR 950

Query: 611 LQNCKRLQSLPELPCGSSIHARH-CTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
           L++C+ L+SLPELP    I   H C SL+++S +S            + F+NC N
Sbjct: 951 LRHCRNLRSLPELPQSLKILNVHGCVSLESVSWASEQFPSH------YTFNNCFN 999



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 88/144 (61%), Gaps = 2/144 (1%)

Query: 478 ENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVD 537
           E++S    + L+ LK L L  C  L+    I  N++ L L  T+I+ELPS + +LS LV 
Sbjct: 695 EDSSESIMVYLEQLKVLDLSRCIELEDIQVIPNNLKKLYLGGTSIQELPSLV-HLSELVV 753

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIP 597
           LDL NC  L+ +  RL  L SL  LNLSGC +LE + E++    +LE L LA    +++P
Sbjct: 754 LDLENCKQLQKIPLRLSTLTSLAVLNLSGCSELEDI-EDLNLPRNLEELYLAGTAIQEVP 812

Query: 598 SSMKQLSKLSDLRLQNCKRLQSLP 621
           SS+  LS+L  L LQNCKRL+ LP
Sbjct: 813 SSITYLSELVILDLQNCKRLRRLP 836


>gi|147771313|emb|CAN73963.1| hypothetical protein VITISV_034210 [Vitis vinifera]
          Length = 1384

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/335 (41%), Positives = 202/335 (60%), Gaps = 33/335 (9%)

Query: 195 KTTIASAIYSNISSHFEGSYFMQNIRDESE-----------------KVGGLANIH--LN 235
           KTTIA AIY+ IS  ++GS F++N+R+ S+                 K   ++NI   +N
Sbjct: 96  KTTIAQAIYNEISYQYDGSSFLRNVRERSKGDTLQLQNELLHGILKGKGFKISNIDEGVN 155

Query: 236 FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGH 295
             +R L+  +VL++F D+ +L Q++ L    D F   S +IIT+RD Q+L  +    V  
Sbjct: 156 MIKRCLNSKRVLVIFDDVDELTQLEYLADEKDWFKVKSTIIITSRDKQVLAQYG---VDT 212

Query: 296 VFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSE 355
            +EV + +  +++ LFS  AF +N P   +  LS  +I+YA+G+PLAL++LG+ L G   
Sbjct: 213 PYEVHKFNEKEAIELFSLWAFKENLPKGAYKNLSYNMIEYADGLPLALKLLGASLFGKKI 272

Query: 356 EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACR 415
            EWESA+ KLKR+PHM+I KVL++S+DGLDD ++ IFLD ACFFKG D+  V   L    
Sbjct: 273 SEWESALYKLKRIPHMEINKVLRISFDGLDDMDKEIFLDVACFFKGKDKDFVSRILGP-- 330

Query: 416 FSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQV 475
             A+ GI+ L  K L+TIS N I MHDL+Q+MG EI+RQE  +D G+RSR+W   D Y V
Sbjct: 331 -HAEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRIWD-SDAYNV 388

Query: 476 LNENTSLPTGINLDSLKELYLGGCS-NLKRFPEIS 509
           L  N      +   ++K L+L  C  N  +F E S
Sbjct: 389 LTRN------MGTRAIKALFLNICKFNPTQFTEES 417



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 103/192 (53%), Gaps = 28/192 (14%)

Query: 481  SLPTGI-NLDSLKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSSIGNLSRLV 536
            SLPT I     LK     GCS L+ FPEI  +   +E L+L  +AI+E+PSSI  L  L 
Sbjct: 954  SLPTSICEFKFLKTFSCSGCSQLESFPEILEDMEILEKLELDGSAIKEIPSSIQRLRGLQ 1013

Query: 537  DLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKD---- 592
            DL+L  C  L ++   +CNL SL+ L ++ C +L+KLPE +G L+SLE L++ + D    
Sbjct: 1014 DLNLAYCRNLVNLPESICNLTSLKTLTITSCPELKKLPENLGRLQSLESLHVKDFDSMNC 1073

Query: 593  ----------------FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCT 635
                               +P  + QL KL  L L +CK LQ +P LP   + + A  CT
Sbjct: 1074 QLPSLSVLLEIFTTNQLRSLPDGISQLHKLGFLDLSHCKLLQHIPALPSSVTYVDAHQCT 1133

Query: 636  SLKTLSNSSTLL 647
            SLK    SS+LL
Sbjct: 1134 SLKI---SSSLL 1142



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 93/162 (57%), Gaps = 7/162 (4%)

Query: 491 LKELYLGGCSNLKRFPEISCN---IEDLDLKETAIEELPSS--IGNLSRLVDLDLTNCSG 545
           L+ L  G CS LKRFPEI  N   + +LDL  TAIEELPSS    +L  L  L    CS 
Sbjct: 558 LQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIEELPSSSSFEHLKALKILSFNRCSK 617

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEK-LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLS 604
           L  +   +C L SL  L+LS C  +E  +P +I  L SL+ LNL   DF  IP+++ QLS
Sbjct: 618 LNKIPIDVCCLSSLEVLDLSYCNIMEGGIPSDICRLSSLKELNLKSNDFRSIPATINQLS 677

Query: 605 KLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTL 646
           +L  L L +C+ L+ +PELP    +   H  +L TLS +S L
Sbjct: 678 RLQVLNLSHCQNLEHVPELPSSLRLLDAHGPNL-TLSTASFL 718



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 6/151 (3%)

Query: 517  LKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEE 576
             K++ ++ELP  I N   L  L L +C  LKS+ + +C  K L+  + SGC +LE  PE 
Sbjct: 924  FKDSDMQELPI-IENPLELDGLCLRDCENLKSLPTSICEFKFLKTFSCSGCSQLESFPEI 982

Query: 577  IGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG----SSIHAR 632
            + ++E LE L L     ++IPSS+++L  L DL L  C+ L +LPE  C      ++   
Sbjct: 983  LEDMEILEKLELDGSAIKEIPSSIQRLRGLQDLNLAYCRNLVNLPESICNLTSLKTLTIT 1042

Query: 633  HCTSLKTL-SNSSTLLTRSSKHWDIFNFSNC 662
             C  LK L  N   L +  S H   F+  NC
Sbjct: 1043 SCPELKKLPENLGRLQSLESLHVKDFDSMNC 1073



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)

Query: 481 SLPTGINLDSLKELYLGGCSNLK---RFPEISCNIEDLDLK-ETAIEELP--SSIGNLSR 534
           SLPT  +   L  L L G SN+K   R  ++   ++ ++L     + E+P  SS+ NL  
Sbjct: 478 SLPTNFHAKDLAALILRG-SNIKQLWRGNKLHNKLKVINLSFSVHLTEIPDFSSVPNLEI 536

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           L+   L  C  L+ +   +   K L+ L+   C KL++ PE  GN+  L  L+L+    E
Sbjct: 537 LI---LKGCENLECLPRDIYKWKHLQTLSCGECSKLKRFPEIKGNMRKLRELDLSGTAIE 593

Query: 595 KIP--SSMKQLSKLSDLRLQNCKRLQSLP-ELPCGSSI 629
           ++P  SS + L  L  L    C +L  +P ++ C SS+
Sbjct: 594 ELPSSSSFEHLKALKILSFNRCSKLNKIPIDVCCLSSL 631


>gi|298205188|emb|CBI17247.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 207/615 (33%), Positives = 303/615 (49%), Gaps = 108/615 (17%)

Query: 140 GNVNDISKKLSDLFPS------DNKDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGIGG 192
           G+VN+I K   D+F        D  D LVG++S + EI  +L +    +   +GI GIGG
Sbjct: 31  GHVNEIVK---DIFRRLNCRMLDVDDNLVGMDSHVNEIIRRLCVDQLNDVRIIGICGIGG 87

Query: 193 IGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG-------LANIHLNFERRR----- 240
           +GKTTIA  +Y+  S  FE   F++N+R+    +G        L ++ L  ER +     
Sbjct: 88  MGKTTIAKVVYNRFSHEFEYMSFLENVREVGNTMGSHHLQNQFLCDL-LQVERNQNVSNV 146

Query: 241 ----------LSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRG 290
                     L   +V IV  D+    Q++ L+   D    GSRVIITTR+  LL+    
Sbjct: 147 GQGANTIKNVLRCKRVFIVLDDIDHSNQLEYLLRNRDWLGRGSRVIITTRNKHLLQ---- 202

Query: 291 SRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYL 350
                V+EV+EL+   +  LFS  AF QN P   F++LS+ V+ Y +G+PLAL+VLGS+L
Sbjct: 203 -ETDDVYEVEELNSKQARELFSLFAFRQNLPKQDFIDLSDRVVNYCHGLPLALKVLGSFL 261

Query: 351 KGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNF 410
              +  +WES ++KL+R   + I  VLKVSYDGLD  +Q IFLD AC FKG D+  V   
Sbjct: 262 FNKAIPQWESELSKLERELEVGISDVLKVSYDGLDYTQQEIFLDIACCFKGKDKDFVSRI 321

Query: 411 LDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPE 470
           LD C F A+ GI  L  K L+++S NKI MHDL+Q+MG  I+R E + DP K  RLW P 
Sbjct: 322 LDGCNFYAERGIRALCDKCLISLSENKILMHDLIQQMGWNIIRSEYLGDPTKWRRLWDPS 381

Query: 471 DIYQV---------------LNENTSLPTGINLDS------LKELYLGGC-----SNLK- 503
           DI +                L+ +T L     + +      L ++Y  G        LK 
Sbjct: 382 DICRAFRMGGMKNVEAIFLDLSRSTPLEVSTKIFAKMKKLRLLKIYSSGYYGTMEKQLKV 441

Query: 504 ------RFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK 557
                 +FP  +  +  L  +    + LPS+   ++ L++L++ + S +K +  R   L+
Sbjct: 442 ILPEDFQFP--AHELRYLHWEGYPFKSLPSNFLGVN-LIELNMKD-SNIKQLMQRNERLE 497

Query: 558 SLRRLNLSG----------------------CLKLEKLPEEIGNLESLEYLN-LAEKDFE 594
            L+ LNLSG                      C  L  +   IG+L+ L  LN L  ++  
Sbjct: 498 QLKFLNLSGSRQLTETSFSNMPNLETLILADCTSLNVVDPSIGDLKKLTVLNLLGCENLT 557

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHA-----RHCTSLKTLSNSSTLLTR 649
            +PSS++ L  L  + L  C  L+  PE+  GS + A          +K L +S  LLTR
Sbjct: 558 SLPSSIQYLDSLEAMNLMTCSNLEEFPEMK-GSPMKALSDLLLDGCGIKELPSSIELLTR 616

Query: 650 SSKHWDIFNFSNCSN 664
             + +     S C N
Sbjct: 617 LKRLY----LSKCKN 627



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 101/181 (55%), Gaps = 27/181 (14%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEI----SCNIEDLDLKETAIEELPSSIGNLSRL 535
           SLP+ I  L SL +L L GCSNL  FPEI     C +E LD++ + I+ELPSSI NL  L
Sbjct: 630 SLPSSICRLKSLVQLDLHGCSNLDTFPEIMEDMKC-LESLDIRSSGIKELPSSIQNLKSL 688

Query: 536 VDLDLTNC--------SGLKSVSSRLCN-----------LKSLRRLNLSGCLKLE-KLPE 575
           + LD++NC          L+SV+ R C+             S+ +L+ S C  +E  +P 
Sbjct: 689 LRLDMSNCLVTLPDSIYNLRSVTLRGCSNLEKFPKNPEGFYSIVQLDFSHCNLMEGSIPT 748

Query: 576 EIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHC 634
           EI +L SLE LNL+      IPS + QL KL  L + +C+ LQ +PELP     I A +C
Sbjct: 749 EIWDLNSLEILNLSWNHMVSIPSGISQLCKLDFLDISHCEMLQDIPELPSSLRKIDALYC 808

Query: 635 T 635
           T
Sbjct: 809 T 809



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 108/191 (56%), Gaps = 14/191 (7%)

Query: 480 TSLPTGIN-LDSLKELYLGGCSNLKRFPEISCN----IEDLDLKETAIEELPSSIGNLSR 534
           TSLP+ I  LDSL+ + L  CSNL+ FPE+  +    + DL L    I+ELPSSI  L+R
Sbjct: 557 TSLPSSIQYLDSLEAMNLMTCSNLEEFPEMKGSPMKALSDLLLDGCGIKELPSSIELLTR 616

Query: 535 LVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFE 594
           L  L L+ C  L+S+ S +C LKSL +L+L GC  L+  PE + +++ LE L++     +
Sbjct: 617 LKRLYLSKCKNLRSLPSSICRLKSLVQLDLHGCSNLDTFPEIMEDMKCLESLDIRSSGIK 676

Query: 595 KIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARHCTSLKTLSNSSTLLTRSSKHW 654
           ++PSS++ L  L  L + NC  L +LP+     SI+     +L+  SN           +
Sbjct: 677 ELPSSIQNLKSLLRLDMSNC--LVTLPD-----SIYNLRSVTLRGCSNLEKFPKNPEGFY 729

Query: 655 DI--FNFSNCS 663
            I   +FS+C+
Sbjct: 730 SIVQLDFSHCN 740


>gi|356506553|ref|XP_003522044.1| PREDICTED: probable WRKY transcription factor 19-like [Glycine max]
          Length = 1026

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 198/647 (30%), Positives = 297/647 (45%), Gaps = 151/647 (23%)

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           LVG++  +  +ES L   S +   +GIWG+GG GKTTIA  ++S +   +E   F+ N++
Sbjct: 111 LVGIDKQVAHLESLLKQESKDVCVIGIWGVGGNGKTTIAQEVFSKLYLEYESCCFLANVK 170

Query: 221 DESEKVGGL-------ANI---HLNFE---------RRRLSRMKVLIVFYDLTDLKQIDL 261
           +E  ++G +       A+I   ++N +         ++ + + KVLIV  D+ D +Q++ 
Sbjct: 171 EEIRRLGVISLKEKLFASILQKYVNIKTQKGLSSSIKKMMGQKKVLIVLDDVNDSEQLEE 230

Query: 262 LIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHP 321
           L G  D +  GSR+IITTRD+++L     ++V  ++ V  LS  ++  LF  NAF Q   
Sbjct: 231 LFGTPDWYGSGSRIIITTRDIKVLI---ANKVPEIYHVGGLSSCEAFQLFKLNAFNQGDL 287

Query: 322 AAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSY 381
              F ELS  V+ YA G+PL L++L   L G  +E W+S + KLK +   ++   +K+S+
Sbjct: 288 EMEFYELSKRVVDYAKGIPLVLKILAHLLCGKDKEVWKSQLEKLKGIKSNNVHDFVKLSF 347

Query: 382 DGLDDEEQNIFLDTACFFKGNDQYLVMNF----------LDAC--RFSAKIGISRLVGKS 429
           D L  EEQ I LD ACF +  +  ++ NF          L  C    +  +G+ RL  KS
Sbjct: 348 DDLHHEEQEILLDLACFCRRAN--MIENFNMKVDSINILLGDCGSHNAVVVGLERLKEKS 405

Query: 430 LVTIS-NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNEN--------- 479
           L+TIS +N ++M D +QEM  EIV QES  D G RSRLW P +IY VL  +         
Sbjct: 406 LITISEDNVVSMLDTIQEMAWEIVCQES-NDLGNRSRLWDPIEIYDVLKNDKGTKAIRSI 464

Query: 480 -TSLPTGINL----------DSLKELYLGGCS-----NLKRFPE-----------ISCNI 512
            T L T  NL           +L+ L  G  S      L+  P            ++C  
Sbjct: 465 TTPLSTLKNLKLRPDAFVRMSNLQFLDFGNNSPSLPQGLQSLPNELRYLHWIHYPLTCLP 524

Query: 513 ED--------LDLKETAIEELPSSIGNLSRLVDLDLTNC--------------------- 543
           E         LDL  + +E+L   + NL  L ++ L  C                     
Sbjct: 525 EQFSAEKLVILDLSCSRVEKLWHEVKNLVNLKNVKLRWCVLLNELPDFSKSTNLKVLDVS 584

Query: 544 --SGLKSVSSRLCNLKSLRRLNLSGCLKLEK----------------------------- 572
             SGL SV   + +L  L +L+LSGC  L K                             
Sbjct: 585 CSSGLTSVHPSIFSLHKLEKLDLSGCSSLIKFSSDDDGHLSSLLYLNLSDCEELREFSVT 644

Query: 573 ----------------LPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKR 616
                           LP   G+L  LE L+L   D E +P+ +  L++L  L L  C  
Sbjct: 645 AENVVELDLTGILISSLPLSFGSLRKLEMLHLIRSDIESLPTCINNLTRLRYLDLSCCSN 704

Query: 617 LQSLPELPCG-SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
           L  LP+LP    ++HA  C SL+T+   ST + +  ++     F NC
Sbjct: 705 LCILPKLPPSLETLHADECESLETVLFPSTAVEQFEENRKRVEFWNC 751


>gi|9758746|dbj|BAB09118.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1031

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 227/691 (32%), Positives = 319/691 (46%), Gaps = 131/691 (18%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D RH+ VSHL  AL    I TF DDK L  G+ IS  L  AIEGS   +V
Sbjct: 12  YDVFLSFRGEDTRHSIVSHLYEALTSRGIATFKDDKRLELGDHISEELQRAIEGSDFVVV 71

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIP--- 131
           + SE Y +SRWCL EL  I+E + +    V PVFY V+PS   Y      +G FD+    
Sbjct: 72  VLSENYPTSRWCLMELQSIMELQMEGRLGVFPVFYRVEPSAVRY-----QLGSFDLEGYQ 126

Query: 132 ------------------------------TSESVLIEGNVNDISKKLSDLFPSDNKDQL 161
                                           E+ ++   V DISK+ +     D ++  
Sbjct: 127 RDPQMADMVPKWRQALKLIADLSGVASGQCIDEATMVRKIVEDISKRKTLKHKIDFRN-F 185

Query: 162 VGVESIIKEIES--QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           VGV++ ++ ++S   + S + E   +GIWG+GGIGKTTIA  +Y  +SS F  SYF Q+I
Sbjct: 186 VGVDTHLQGLKSLLDMDSNNDEVRMIGIWGMGGIGKTTIAKCLYDQLSSQFTASYFTQDI 245

Query: 220 RDESEKVGGLANIHLNFE----------------------RRRLSRMKVLIVFYDLTDLK 257
           +   +++  L   HL                           RL   KVL+V   +  L 
Sbjct: 246 KGIHKELDLL---HLQNRLLYNTLGDDIMPWSVEAGREVIAARLGNHKVLLVLDGVDKLV 302

Query: 258 QIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF- 316
           QI  L      F   SR+IITTRD  LL N  G  V  +++VK L   DSL +F + AF 
Sbjct: 303 QIHALAKETRWFGRQSRIIITTRDKGLL-NSCG--VKTIYDVKCLDDKDSLQMFKQIAFE 359

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM--SEEEWESAVNKLKRMPHMDIQ 374
           G + P+  F +LS    + A+G+P ALQ    +L+G   S EEWE AV  L+  P  +I 
Sbjct: 360 GGSPPSVDFEQLSIRAARLAHGLPSALQAYALFLRGRANSPEEWEEAVCGLESTPDENIM 419

Query: 375 KVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTI- 433
           ++LK+SY+GL    QN FL  AC F G+    V + LD  R  + + +  L  KSL+ I 
Sbjct: 420 EILKISYEGLAKAHQNAFLHVACLFNGDTFRRVTSLLDVSRMESNLWMRVLAEKSLINIT 479

Query: 434 SNNKITMHDLLQEMGGEIVRQES--IKDP------------------------------G 461
           SN  +T+H L+++MG EI+      I DP                              G
Sbjct: 480 SNGYVTLHKLVEQMGREIMLASGKFIGDPETIHDTLGMGQTESISLHICEMTCAFSMATG 539

Query: 462 KRSRLWHPE--DIYQVLNENTSLPTGINLDSLKE----LYLGGCSNLKRFP---EISCNI 512
             SR++      +Y+ +NE  S+   I  D        L       L +FP      C +
Sbjct: 540 VFSRMYKLRFLKVYKHVNERESMLQVIPEDEYPSINCLLLHWDAFPLSKFPLRFNTYCLV 599

Query: 513 EDLDLKETAIEELPS-----SIGNLS---------RLVDLDLTNCSGLKSVSSRLCNLKS 558
           E L+L+ + +E L S     +I N S          L  LD+T    LK +    C  + 
Sbjct: 600 E-LNLRHSNLETLWSGVLQCAISNYSLVSTPQKFGHLRKLDVTGSKNLKQLPDLSCAEEL 658

Query: 559 LRRLNLSGCLKLEKLPEEIGNLESLEYLNLA 589
              L    C +L+ +PE I    +L  LNL+
Sbjct: 659 DELLLEQ-CKRLKGIPESIAERSTLGRLNLS 688



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 26/154 (16%)

Query: 512 IEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKSV-------SSRLCNLKSLR---- 560
           +E+LDL     E LP  +  LSRL  L L NCS LK +       S  L N K+LR    
Sbjct: 827 LENLDLSGNDFENLPEDMNRLSRLKTLCLRNCSKLKELPELTQVQSLTLSNCKNLRSLVK 886

Query: 561 --------------RLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKL 606
                          L L  C  ++ L +++ +   L YL+L+  DF+K+PSS++ L+ L
Sbjct: 887 ISDASQDPSLYSLLELCLDNCKNVKSLSDQLSHFPKLAYLDLSSHDFKKLPSSIRDLTSL 946

Query: 607 SDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKT 639
             L L NCK+L+SL ELP     + A+ C SL+ 
Sbjct: 947 VTLCLNNCKKLKSLEELPLSLQFLDAKGCDSLEA 980



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 5/127 (3%)

Query: 518 KETAIEELPSSIGNLSRLVDLDLTNCS----GLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           +  ++ + P  I  L++   L++   S    G         ++  L++L L   L ++KL
Sbjct: 759 RTVSVHQAPRLISELNKSTTLNIRRFSYKENGRPVTLHSFPDIPGLKQLELVN-LNIQKL 817

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSIHARH 633
            + IG+ E LE L+L+  DFE +P  M +LS+L  L L+NC +L+ LPEL    S+   +
Sbjct: 818 SDGIGHFEFLENLDLSGNDFENLPEDMNRLSRLKTLCLRNCSKLKELPELTQVQSLTLSN 877

Query: 634 CTSLKTL 640
           C +L++L
Sbjct: 878 CKNLRSL 884


>gi|9858476|gb|AAG01051.1|AF175394_1 resistance protein LM12 [Glycine max]
          Length = 438

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 158/434 (36%), Positives = 241/434 (55%), Gaps = 59/434 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG+D R+ F  +L   L    I TFIDD +   G+EI+ +L +AIE SKI I+
Sbjct: 8   YDVFLSFRGEDTRYGFTGYLYNVLRERGIHTFIDDDEPQEGDEITTALEAAIEKSKIFII 67

Query: 75  IFSEGYASSRWCLNELVKILE-SKNKYGQIVVPVFYLVDPSDAGYCP-SLG--------- 123
           + SE YASS +CLN L  IL  +K     +V+PVFY V+PSD  +   S G         
Sbjct: 68  VLSENYASSSFCLNSLTHILNFTKENNDVLVLPVFYRVNPSDVRHHRGSFGEALANHEKK 127

Query: 124 -----------W-MGIFDIP--TSESVLIEGN------VNDISKKLSDLFPSDN---KDQ 160
                      W M +  +   +      +GN      + +I + +S+ F  D+    D 
Sbjct: 128 SNSNNMEKLETWKMALHQVSNISGHHFQHDGNKYEYKFIKEIVESVSNKFNHDHLHVSDV 187

Query: 161 LVGVESIIKEIESQLLSGSTEF-NTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNI 219
           LVG+ES + E++S L  G  +  + VGI G+ G+GKTT+A A+Y++I+ HFE S F++N+
Sbjct: 188 LVGLESPVLEVKSLLDVGRDDVVHMVGIHGLAGVGKTTLAIAVYNSIAGHFEASCFLENV 247

Query: 220 RDESEKVGGLANIH-------------------LNFERRRLSRMKVLIVFYDLTDLKQID 260
           +  S  + GL  +                    +   +R+L + KVL++  D+ + KQ+ 
Sbjct: 248 KRTSNTINGLEKLQSFLLSKTAGEIKLTNWREGIPIIKRKLKQKKVLLILDDVDEDKQLQ 307

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFG-QN 319
            LIG  D F  GSR+IITTRD  LL  H    V   ++V+EL+   +L L ++ AF  + 
Sbjct: 308 ALIGSPDWFGLGSRIIITTRDEHLLALHN---VKITYKVRELNEKHALQLLTQKAFELEK 364

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
                + ++ N  + YA+G+P  L+V+GS L G S EEW+SA++  +R+PH     +LKV
Sbjct: 365 GIDPSYHDILNRAVTYASGLPFVLEVIGSNLFGKSIEEWKSALDGYERIPHKKNLCILKV 424

Query: 380 SYDGLDDEEQNIFL 393
           SYD L+++E++IFL
Sbjct: 425 SYDALNEDEKSIFL 438


>gi|357513721|ref|XP_003627149.1| Disease resistance protein [Medicago truncatula]
 gi|355521171|gb|AET01625.1| Disease resistance protein [Medicago truncatula]
          Length = 1630

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 202/593 (34%), Positives = 278/593 (46%), Gaps = 112/593 (18%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           +S +I+  V D+ +KLS ++P++ +D LV V+  I+ IE  L +       VGIWG+ GI
Sbjct: 243 DSQVIDNIVEDVLQKLSLMYPNELRD-LVKVDKNIEHIELLLKT----IPRVGIWGMSGI 297

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGL-----------------ANIH--L 234
           GKTTIA  +++    +++   F++ I +ESEK G +                 +++H   
Sbjct: 298 GKTTIAKQMFAKNFPYYDNVCFLEKINEESEKFGQIYVRNKLLSELLKQKITASDVHGLH 357

Query: 235 NFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
            F + RL R KV IV  D+ +  Q+D L   L    P SR+IITTRD   L      +V 
Sbjct: 358 TFIKTRLFRKKVFIVLDDVDNATQLDDLCRVLGDLGPDSRIIITTRDRHTL----SGKVD 413

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
            ++EVK     DSL LFS  AF + HP  G+  LS   +K A GVPLALQVLGS+     
Sbjct: 414 EIYEVKTWKLKDSLNLFSLRAFKKAHPLKGYERLSERAVKCAGGVPLALQVLGSHFHSRE 473

Query: 355 EEEWESAVNKL--KRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
            E WES +N    K     +IQKVL+ SY+GL   E+ +FLD A FFKG ++ +V   LD
Sbjct: 474 PEFWESELNDYVKKGGAFHEIQKVLRASYNGLSWREKEMFLDIAFFFKGENKDIVTRILD 533

Query: 413 ACRFSAKIGISRLVGKSLVTISNN-KITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           A  ++A  GI  L  K+L+TISNN +I MHDLLQ+M  +IVR+E   D GK SRL    D
Sbjct: 534 AYGYNATSGIKILEDKALITISNNDRIQMHDLLQKMALDIVREE-YNDRGKCSRLRDATD 592

Query: 472 IYQVLNEN------------------------------------------------TSLP 483
           I  VL  N                                                  LP
Sbjct: 593 ICDVLGNNKGSDAIEGIIFDLSQKVDIHVQADTFKLMTKLRFLKFHIPNGKKKLGTVHLP 652

Query: 484 TGIN--LDSLKELYLGGCSNLKRFPEI--SCNIEDLDLKETAIEELPSSIGNLSRLVDLD 539
             I    D LK L   G   LK  PE   +  +  + L  + IE L   +  +  L  +D
Sbjct: 653 ENIMPFFDKLKYLEWNGYP-LKSLPEPFHAEQLIQICLPHSNIEHLWHGMQEVVNLEVID 711

Query: 540 LTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSS 599
           L+ C   +S+      LK L++L LSGC       EE+  L+               PS+
Sbjct: 712 LSECKKFRSLPDLSGALK-LKQLRLSGC-------EELCELQ---------------PSA 748

Query: 600 MKQLSKLSDLRLQNCKRLQSL---PELPCGSSIHARHCTSLKTLSNSSTLLTR 649
             +   L  L L  C +L+SL     L        + C SLK  S SS  + R
Sbjct: 749 FSK-DTLDTLLLDRCIKLESLMGEKHLTSLKYFSVKGCKSLKEFSLSSDSINR 800



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 80/104 (76%)

Query: 11  IPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSK 70
           I H K+DVF+SFRG+D R NF + L+ AL    IE++ID  L +G+E+ P+L+ AI+ S 
Sbjct: 3   ISHKKYDVFISFRGEDTRTNFTAQLHRALTDRSIESYIDYSLVKGDEVGPALAEAIKDSH 62

Query: 71  ISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS 114
           +SIV+FS+ YA+S+WCL+EL++IL  +  +GQ+V+PVFY +DPS
Sbjct: 63  MSIVVFSKDYATSKWCLDELLQILHCRELFGQVVIPVFYNIDPS 106



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 26/186 (13%)

Query: 487 NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLV-----DLDLT 541
           +L SLK   + GC +LK F   S +I  LDL +T I+ L  S+G+++ L+     DL+LT
Sbjct: 773 HLTSLKYFSVKGCKSLKEFSLSSDSINRLDLSKTGIKILHPSLGDMNNLIWLNLEDLNLT 832

Query: 542 NC----SGLKSVSS---RLCNLKSLRRLN-------------LSGCLKLEKLPEEIGNLE 581
           N     S L+S++      CN+ +  +L              L  C  L +LP  I +LE
Sbjct: 833 NLPIELSHLRSLTELRVSKCNVVTKSKLEALFDGLTLLRLLHLKDCCNLIELPANISSLE 892

Query: 582 SLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTL 640
           SL  L L     E++P+S+K LS+L    L NC +L+ LPELP       A +CTSL T+
Sbjct: 893 SLHELRLDGSSVEELPASIKYLSELEIQSLDNCSKLRCLPELPLSIKEFQADNCTSLITV 952

Query: 641 SNSSTL 646
           S   T 
Sbjct: 953 STLKTF 958


>gi|297791295|ref|XP_002863532.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297309367|gb|EFH39791.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1184

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 219/766 (28%), Positives = 341/766 (44%), Gaps = 159/766 (20%)

Query: 5   SSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSS 64
           SS++   P P+H VF++FRG ++R+ FVSHL  AL  + I  FID   +RG  I   L  
Sbjct: 4   SSTVEERP-PQHQVFINFRGAELRNGFVSHLVTALQSKDINVFIDKLEDRGKPIE-ILLD 61

Query: 65  AIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC----- 119
            I+ S+I++VIFS  Y  S WC+ E+ KI +  ++    V+P+FY V+PS   Y      
Sbjct: 62  RIQKSRIALVIFSGKYTESVWCMREVAKIKDCMDEGTLEVIPIFYKVEPSTVKYLMGDFG 121

Query: 120 -----------------------PSLGWMG-IFDIPTSESVLIEGNVNDISKKL------ 149
                                     G MG + D  + ES +++  V+DI K L      
Sbjct: 122 DTFRSLAMNEYDEGKEKWEDALKAVSGIMGTVVDEKSEESEIVKKTVDDIRKALIRIPSE 181

Query: 150 ----SDLFPSDNKD----------QLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGK 195
               + + PS N+D          +  G E  +KE+E +L     +   +G+ G+ GIGK
Sbjct: 182 GSQTTSVNPSPNRDTRTSSGEEKHETFGNELRLKELEEKLDRTIKKTCIIGVVGMPGIGK 241

Query: 196 TTIASAIYSNISSHFEGSYFMQNIRDESEK-------------------VGGLANIHLNF 236
           TT+   +++   + F     +  IR +S                     V  L N+   +
Sbjct: 242 TTLLKELFNKWQNKFNRCALIDEIRGKSNPSEDFDILPKLLVRELLAFNVSTLENVEDPY 301

Query: 237 E--RRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVG 294
           E  +  L   KVL++  D++  +QID L+G+ D    GSR++I T D+ LLK+     V 
Sbjct: 302 EVFKGLLLNEKVLVILDDVSKSEQIDALLGKRDWITEGSRIVIATNDMSLLKDW----VT 357

Query: 295 HVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMS 354
             + V  L++ D L LF  +AF + +P   F++LS   + +A G+PLAL++LG  L G  
Sbjct: 358 DTYVVPLLNHQDGLKLFHYHAFDEANPPEDFMQLSKEFVHFARGLPLALKILGKELYGKG 417

Query: 355 EEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDAC 414
             +WE     L   P   I+ V +VSYD L  +++  FLD AC F+  D   V + L + 
Sbjct: 418 RLQWEEKRKLLAESPSPFIESVFRVSYDELSSDQKKAFLDIAC-FRSQDVAYVESLLASS 476

Query: 415 RFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ 474
              A   +  L  K L+   + ++ MHDLL     E+  + S +D     RLW  +DI +
Sbjct: 477 E--AMSAVKALTDKFLINTCDGRVEMHDLLYTFSRELDPKTSTEDDRTGRRLWRHQDIIK 534

Query: 475 ------VLNE-NTSLPTGINLD--------SLKELYLGGCSNLKRF------------PE 507
                 V  E   +   GI LD        SL + +    +NL+               E
Sbjct: 535 EGKINVVQKEMRAAHVRGIFLDLSQVKGETSLAKDHFNRMTNLRYLKVYNSHCPQECKTE 594

Query: 508 ISCNIED---LDLKET--------AIEELPSSIGNLSRLVDLDLT--------------- 541
              NI D   L LKE          ++ELP +   ++ LVDL L                
Sbjct: 595 NRINIPDGLKLPLKEVRCLHWLKFPLDELPEAFNPIN-LVDLKLPYSEIERLWEGDKDTP 653

Query: 542 -------NCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPE----EIGNL---------- 580
                  N S + S  S L    +L+ LNL GC +LE L +     + +L          
Sbjct: 654 VLKWVDLNHSSMLSSLSGLSKAPNLQGLNLEGCTRLESLADVDSKSLKSLTLSGCTSFKK 713

Query: 581 -----ESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
                E+LE L+L      ++P ++  L KL  L +++C+ L+++P
Sbjct: 714 FPLIPENLEALHLDRTAISQLPDNVVNLKKLVLLNMKDCELLENIP 759



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 113/198 (57%), Gaps = 19/198 (9%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           ++  SLK L L GC++ K+FP I  N+E L L  TAI +LP ++ NL +LV L++ +C  
Sbjct: 695 VDSKSLKSLTLSGCTSFKKFPLIPENLEALHLDRTAISQLPDNVVNLKKLVLLNMKDCEL 754

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-----------------EIGNLESLEYLNL 588
           L+++ + +  LK+L++L LSGC KL+  PE                  +  L S++YL L
Sbjct: 755 LENIPTCVDKLKALQKLVLSGCKKLQNFPEVNKSSLKILLLDRTAIKTMPQLPSVQYLCL 814

Query: 589 AEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
           +  D    IP+ + QLS+L+ L L+ CK L S+PELP       A  C++LKT++     
Sbjct: 815 SFNDHLSCIPADINQLSQLTRLDLKYCKSLTSVPELPPNLQYFDADGCSALKTVAKPLAR 874

Query: 647 LTRSSKHWDIFNFSNCSN 664
           +  + ++   FNF+NC N
Sbjct: 875 IMPTVQNHCTFNFTNCGN 892


>gi|15242300|ref|NP_199319.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758979|dbj|BAB09489.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007813|gb|AED95196.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1165

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 222/805 (27%), Positives = 345/805 (42%), Gaps = 195/805 (24%)

Query: 1   MASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISP 60
           MA+SSSS  +   P+H VF++FRG+D+R  FVSHL  AL  + I+ FID+  ++G  +  
Sbjct: 1   MAASSSSTGL--PPQHQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNYADKGEPLE- 57

Query: 61  SLSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPS------ 114
           +L + I  SKI++ IFS  Y  S WCL EL  I +   K   + +P+FY VDPS      
Sbjct: 58  TLLTKIHDSKIALAIFSGKYTESTWCLRELAMIKDCVEKGKLVAIPIFYKVDPSTVRGVR 117

Query: 115 ----DA-------------GYCPSLGWM-GIFDIPTSESVLIEGNVNDI----------- 145
               DA              +  +L W+ G+  I   +       +N+I           
Sbjct: 118 GQFGDAFRDLEERDVIKKKEWKQALKWIPGLIGITVHDKSPESEILNEIVKEVKKVLKKV 177

Query: 146 ----SKKLSDLFPSDN----------KDQLVGVESIIKEIESQL-LSGSTEFNTVGIWGI 190
               S+K+  + PS +          KD+  G++  +KE+E +L L        +G+ G+
Sbjct: 178 SLEGSQKVVSVDPSQSIDTLSSVGGEKDKTFGIKQRLKELEEKLDLVKYKGTRVIGVVGM 237

Query: 191 GGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV-------------------GGLAN 231
            GIGKTT+   +Y      F     +  IR +S                        L +
Sbjct: 238 PGIGKTTLVKELYKTWQGKFSRYALIDQIRGKSNNFRLECLPTLLLEKLLPELNNPQLDS 297

Query: 232 IHLNFERRR--LSRMKVLIVFYDLTDLKQIDLLIGRLD------GFVPGSRVIITTRDVQ 283
           I   ++  +  L   KVL+V  D++  +QI  L+G+ D          GSR+II T D+ 
Sbjct: 298 IEEPYKTHKGLLRERKVLVVLDDVSRREQIYALLGKYDLHSKHEWIKDGSRIIIATNDIS 357

Query: 284 LLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH---PAAGFLELSNIVIKYANGVP 340
            LK      V   + V++L++ D L LF  +AF  +    P   F++LS+  + YA G P
Sbjct: 358 SLKG----LVHDTYVVRQLNHRDGLQLFRYHAFHYDQATPPKVDFMKLSDEFVHYARGHP 413

Query: 341 LALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFK 400
           LAL++LG  L   + + WE+ +  L + P   I +V++VSYD L   +++ FLD AC F+
Sbjct: 414 LALKILGRELYEKNMKHWETKLIILAQSPTTYIGEVVQVSYDELSLAQKDAFLDIAC-FR 472

Query: 401 GNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDP 460
             D   V + L +    +   I  L  K L+   + ++ MHDLL     E+  + S +  
Sbjct: 473 SQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYRFSRELDLKASTQGG 532

Query: 461 GKRSRLWHPEDIYQV--------------------------------------------- 475
            K+ RLW  +DI  V                                             
Sbjct: 533 SKQRRLWVRQDIINVQQKTMGAANVRGIFLDLSEVKVETSLDREHFKNMRNLRYLKLYNS 592

Query: 476 -------LNENTSLPTGINLDSLKELYLGGCSNLKRFP--EI-----SCNIEDLDLKETA 521
                   N   ++P G+ L  LKE+    C +  +FP  E+       N+ DL L  + 
Sbjct: 593 HCPHECLTNNKINMPDGLEL-PLKEVR---CLHWLKFPLEELPNDFDPINLVDLKLPYSE 648

Query: 522 IEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLE---------- 571
           IE L   + +   L  +DL + S L S+S  L   ++L+RLNL GC  LE          
Sbjct: 649 IERLWDGVKDTPVLKWVDLNHSSKLCSLSG-LSKAQNLQRLNLEGCTSLESLRDVNLTSL 707

Query: 572 --------------------------------KLPEEIGNLESLEYLNLAE-KDFEKIPS 598
                                           +LP+ +GNL+ L  LN+ + K  E IP+
Sbjct: 708 KTLTLSNCSNFKEFPLIPENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKVLETIPT 767

Query: 599 SMKQLSKLSDLRLQNCKRLQSLPEL 623
            + +L  L  L L  C +L+  PE+
Sbjct: 768 CVSELKTLQKLVLSGCSKLKEFPEI 792



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 113/198 (57%), Gaps = 19/198 (9%)

Query: 486 INLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSG 545
           +NL SLK L L  CSN K FP I  N++ L L  T+I +LP ++GNL RLV L++ +C  
Sbjct: 702 VNLTSLKTLTLSNCSNFKEFPLIPENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKV 761

Query: 546 LKSVSSRLCNLKSLRRLNLSGCLKLEKLPE-----------------EIGNLESLEYLNL 588
           L+++ + +  LK+L++L LSGC KL++ PE                  +  L S++YL L
Sbjct: 762 LETIPTCVSELKTLQKLVLSGCSKLKEFPEINKSSLKILLLDGTSIKTMPQLPSVQYLCL 821

Query: 589 AEKD-FEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNSSTL 646
           +  D    +P+ + Q+S+L+ L L+ C +L  +PELP     + A  C+SLK ++     
Sbjct: 822 SRNDHLIYLPAGINQVSQLTRLDLKYCTKLTYVPELPPTLQYLDAHGCSSLKNVAKPLAR 881

Query: 647 LTRSSKHWDIFNFSNCSN 664
           +  + ++   FNF+NC N
Sbjct: 882 IMSTVQNHYTFNFTNCGN 899


>gi|15240889|ref|NP_198651.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9758812|dbj|BAB09346.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332006918|gb|AED94301.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 833

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 199/614 (32%), Positives = 292/614 (47%), Gaps = 134/614 (21%)

Query: 137 LIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKT 196
           + E    D+S  L++  PS + D L+G+++ +KE+ES L   S E   +GIWG  GIGKT
Sbjct: 1   MTEKIATDVSNMLNNYSPSRDFDGLIGMDAHMKEMESLLCLDSDEVRMIGIWGPSGIGKT 60

Query: 197 TIASAIYSNISSHFEGSYFMQNIR----------DE-SEKV----GGLANI--------- 232
           TIA  +YS  S +FE S FM NI+          DE S K+      L+ I         
Sbjct: 61  TIARVLYSQFSENFELSIFMGNIKELMYTRPVCSDEYSAKIQLQKQFLSQIINHKDMELH 120

Query: 233 HLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSR 292
           HL   + RL+  KVLIV   +    Q+D +      F  GSR+IITT+D +LLK H    
Sbjct: 121 HLGVAQDRLNDKKVLIVLDSIDQSIQLDAIAKETRWFGHGSRIIITTQDQKLLKAH---G 177

Query: 293 VGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
           + H+++V+  S  ++  +F   AFGQN P  GF EL+  V K    +PL L+V+GS+ +G
Sbjct: 178 INHIYKVEFPSAYEAYQMFCMYAFGQNFPNDGFEELAWEVTKLLGHLPLGLRVMGSHFRG 237

Query: 353 MSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLD 412
           MS  EW +A+ +LK      IQ +LK SYD L +E++++FL  AC F   +   V ++L 
Sbjct: 238 MSRHEWVNALPRLKIRLDASIQSILKFSYDALCEEDKDLFLHIACLFNNQEMVEVEDYLA 297

Query: 413 ACRFSAKIGISRLVGKSLVT---ISNN--KITMHDLLQEMGGEIVR----QESIKDPGKR 463
                 + G   L  KSL+    +S N  +I MH+LL ++G +IVR     +SI +PGKR
Sbjct: 298 LSFLDVRQGFHLLAEKSLINLKFLSTNCTRIEMHNLLVQLGKDIVRHKPGHQSICEPGKR 357

Query: 464 SRLWHPEDIYQVLNENTSLP--TGINLD--------SLKELYLGGCSNLK---------- 503
             L    DI +VL +NT      GI L+        ++ E    G SNLK          
Sbjct: 358 QFLIDARDICEVLTDNTGNRNVVGIFLEVRNLSCQLNISERAFDGMSNLKFLRFHDPYDD 417

Query: 504 ------------------------RFPEISC--------NIEDLDLKETAIEEL---PSS 528
                                   RFP ++C         + ++ +K + ++ L      
Sbjct: 418 ESDKLYLPQGLNNLPQKLRLIEWSRFP-MTCLPSNFCTKYLVEIRMKNSKLQNLWQGNQP 476

Query: 529 IGNLSR-----------LVDLD---------LTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
           +GNL R           L DL          ++ C  L  + S +  L+ L  L+L GC 
Sbjct: 477 LGNLKRMDLSESKHLKELPDLSTATNLEYLIMSGCISLVELPSSIGKLRKLLMLSLRGCS 536

Query: 569 KLEKLPEEIGNLESLEYLNLAE--------------KDF-------EKIPSSMKQLSKLS 607
           KLE LP  I NLESL+YL+L +              KD        +++PS++K  S L 
Sbjct: 537 KLEALPTNI-NLESLDYLDLTDCLLIKKFPEISTNIKDLKLTKTAIKEVPSTIKSWSHLR 595

Query: 608 DLRLQNCKRLQSLP 621
            L +   + L+ LP
Sbjct: 596 KLEMSYSENLKELP 609



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 92/164 (56%), Gaps = 28/164 (17%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           +LPT INL+SL  L L  C  +K+FPEIS NI+DL L +TAI+E+PS+I + S       
Sbjct: 540 ALPTNINLESLDYLDLTDCLLIKKFPEISTNIKDLKLTKTAIKEVPSTIKSWSH------ 593

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
                             LR+L +S    L++LP  +  + +L Y+N  + + ++IP  +
Sbjct: 594 ------------------LRKLEMSYSENLKELPHALDIITTL-YIN--DTEMQEIPQWV 632

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLSNS 643
           K++S L  L L+ CKRL ++P+L    S +   +C SL+ L+ S
Sbjct: 633 KKISHLQTLGLEGCKRLVTIPQLSDSLSQLVVTNCESLERLNFS 676


>gi|105922359|gb|ABF81412.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 520

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 143/376 (38%), Positives = 222/376 (59%), Gaps = 24/376 (6%)

Query: 134 ESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWGIGGI 193
           ES  I+  V  I  KLS   P+ +K+ LVG++S +K +   +   + +   +GI G+GG+
Sbjct: 57  ESQSIKKIVEYIQCKLSFTLPTISKN-LVGIDSRLKVLNEYIDEQANDTLFIGICGMGGM 115

Query: 194 GKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGGLANIH-------------------- 233
           GKTT+A  +Y  I   F GS F+ N+R+   +  GL  +                     
Sbjct: 116 GKTTVARVLYDRIRWQFGGSCFLANVREVFAEKDGLCRLQEQLLSEISMELPTARDSSRR 175

Query: 234 LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
           ++  +RRL   KVL++  D+ D +Q+ +L      F PGSR+IIT+R+  +L +H  +R+
Sbjct: 176 IDLIKRRLRLKKVLLILDDVDDEEQLQMLAAEHGTFGPGSRIIITSRNKHVLDSHGVTRI 235

Query: 294 GHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGM 353
              +E ++L+  D+L LFS  AF ++ PA    ELS  V+ YANG+PLAL+V+GS+L   
Sbjct: 236 ---YEAEKLNDKDALILFSWKAFKRDQPAEDLSELSKQVVGYANGLPLALEVIGSFLHKR 292

Query: 354 SEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDA 413
              EW+SA++++  +P   I  VL++S+DGL + E+ IFLD ACF KG  +  +   LD+
Sbjct: 293 GLREWKSAIDRMNDIPDRKIIDVLRISFDGLHELEKKIFLDIACFLKGMKKDRITRLLDS 352

Query: 414 CRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIY 473
           C F A IG+  L+ KSL+ +S ++I MH+LLQ+MG EIVR ES ++PG+RSRL   +D+ 
Sbjct: 353 CGFHADIGMQALIEKSLIRVSRDEIRMHNLLQKMGEEIVRCESPEEPGRRSRLCTYKDVC 412

Query: 474 QVLNENTSLPTGINLD 489
             L ++T     I +D
Sbjct: 413 DALKDSTGKIESIFVD 428


>gi|342365826|gb|AEL30360.1| TIR-NBS-LRR-TIR type disease resistance protein [Arachis hypogaea]
          Length = 849

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 193/555 (34%), Positives = 286/555 (51%), Gaps = 70/555 (12%)

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           LVG+ S ++++ + +  G  +   +GIWG+GGIGKTTIA A++  I   FE + F+ ++R
Sbjct: 4   LVGINSRVEQVITLIGLGLNDVRFIGIWGMGGIGKTTIARAVFETIRCSFEVTCFLADVR 63

Query: 221 DESEKVGGLANIHLNFERRRLSRMKV------------------------LIVFYDLTDL 256
           +  EK     +I  + +++ L +M +                        L+V  D+   
Sbjct: 64  ENCEK----KDI-THMQKQLLDQMNISSNAVYNKYDGRTIIQNSLRLKKVLLVLDDVNHE 118

Query: 257 KQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF 316
           KQ++ L G    F PGSR+IITTRD  LL   R +++   + V+ L  N++L LFS  AF
Sbjct: 119 KQLEDLAGEKAWFGPGSRIIITTRDFHLL---RKNKLHETYNVEGLVENEALNLFSLEAF 175

Query: 317 GQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
               P+  FL LS  V+KY+ G+PLAL+VLGSYL G   E W SA+ K+K   H +I  V
Sbjct: 176 NLPKPSEEFLALSKEVVKYSGGLPLALKVLGSYLNGRGIEVWHSAIEKIKHFSHSEIIDV 235

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-- 434
           LK+SYDGLDD E++IFLD ACFFKG  ++ V   L  C   A+IGI  L+ +SL+TI   
Sbjct: 236 LKISYDGLDDMEKDIFLDIACFFKGWQKHHVTEILKRCGHDAEIGIDILINRSLITIDKY 295

Query: 435 --NNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNE--NTSLPTGI---- 486
             +  + MHDLL+EMG  IV QES     KRSRLW  ED+  VL +   T    GI    
Sbjct: 296 DYDYWLGMHDLLEEMGKRIVIQESQNVVCKRSRLWCLEDVEFVLTQKKKTKATHGIVLHE 355

Query: 487 ---------------NLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGN 531
                           L  LK L L G +      +I C ++    +   ++ LP +   
Sbjct: 356 WYSETEVNQRDLSFSKLCQLKLLILDG-AKAPILCDIPCTLKVFCWRRCPMKTLPLTDHQ 414

Query: 532 LSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG--NLESLEYLNLA 589
              LV+++L+  S +  +      L++L  L LS C +L++ P+  G  NL+ L      
Sbjct: 415 RYELVEINLSK-SQIAELWDGKKVLENLEHLYLSWCKQLKQTPDLSGAPNLKKLNLRGCE 473

Query: 590 EKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP---ELPCGSSIHARHCTSLKTLSNSSTL 646
           E D+  I  S+    +L +L L++CKRL++L    E+     +    C+SL+ L      
Sbjct: 474 ELDY--IHPSLAHHKRLVELNLEDCKRLETLGDKLEMSSLEKLDLDSCSSLRRLPEFGEC 531

Query: 647 LTRSSKHWDIFNFSN 661
           + + S    I N  N
Sbjct: 532 MKKLS----ILNLRN 542



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 94/184 (51%), Gaps = 27/184 (14%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEI-SC--NIEDLDLKETAIEELPSSIGNLSRLVD 537
           +L   + + SL++L L  CS+L+R PE   C   +  L+L+ T IEELP ++GNL+ + +
Sbjct: 501 TLGDKLEMSSLEKLDLDSCSSLRRLPEFGECMKKLSILNLRNTGIEELPPTLGNLAGVSE 560

Query: 538 LDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLK----LEKLP------------------- 574
           L+L+ C  +  +   L     L++L L    +    LE L                    
Sbjct: 561 LNLSGCDKITGLLLSLGCFVGLKKLVLRALPQKTDGLESLTVRADYDDSDSSSREESTLS 620

Query: 575 EEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARH 633
            +I +L SL YL+L+   F ++P S+ QL +L+ L+L  C  L+ LPELP     + A+ 
Sbjct: 621 YDIAHLASLTYLDLSRNRFLRVPISIHQLPRLTHLKLSFCDELEVLPELPSSLRELDAQG 680

Query: 634 CTSL 637
           C SL
Sbjct: 681 CYSL 684


>gi|15242335|ref|NP_199334.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|9759606|dbj|BAB11394.1| disease resistance protein-like [Arabidopsis thaliana]
 gi|332007834|gb|AED95217.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 697

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 204/699 (29%), Positives = 331/699 (47%), Gaps = 97/699 (13%)

Query: 17  DVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPSLSSAIEGSKISIVIF 76
           +VF+ F G + R++FVSHL+AA  R  +   +       + ++P  ++  EG K+ +V+F
Sbjct: 8   EVFIDFSGIETRNSFVSHLSAAFRRRSVSVCLGGDCT--DVVTPRKTN--EGCKVFVVVF 63

Query: 77  SEGYASSRWCLNELVKILESKNKYGQIVVPVFY-------------------LVDPSDAG 117
           SE YA S+ CL+ LV+ LE K+  G ++VPV+Y                       ++  
Sbjct: 64  SEDYALSKQCLDTLVEFLERKDD-GLVIVPVYYGGVTESMVKQQTERFGVAFTQHQNNYS 122

Query: 118 YCPSLGW----MGIFDIPTSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIES 173
           Y     W    +    +P  E  L + +   + K ++D+    +    +G+ S + EIE 
Sbjct: 123 YDQVAKWRDCLIQTASLPGHELNLQQEDSEFVEKIVADVREVLDATGKIGIYSRLLEIEK 182

Query: 174 QLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKV------- 226
            L   S +F  +G+WG+ GIGKTTIA A +  +S  F+ S+F+++   E  K        
Sbjct: 183 LLCKQSLKFYYLGLWGMPGIGKTTIAEAAFKQMSKDFDASFFVEDFHKEYHKGRPYKLRE 242

Query: 227 ---------GGLANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVII 277
                    G +    L+F  + L   KVL V  D+ +L   +  +G ++G  PGS +I+
Sbjct: 243 EHLKKVPKGGSIRGPILSF--KELREKKVLFVLDDVRNLMDFESFLGGIEGVSPGSVIIL 300

Query: 278 TTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPA-AGFLELSNIVIKYA 336
           T+RD Q+L      +V  VFEV  L+  +++ LF+R AF +  P+ A  +++S  V +YA
Sbjct: 301 TSRDKQVLHQ---CQVEDVFEVPSLNEEEAVRLFARTAFHKEGPSDAKLMDVSKKVARYA 357

Query: 337 NGVPLALQVLG-SYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDT 395
            G P AL   G    K    EE E    K+++ P  +I  + + SYD L+D E++IFLD 
Sbjct: 358 GGNPKALCFYGRELEKKKKPEEMEEEFEKMRQCPPQEILSLFRSSYDALNDNERSIFLDI 417

Query: 396 ACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNK-ITMHDLLQEMGGEIVRQ 454
           ACFF G     VM  L+ C F   +GI RL  +SL+TIS  K + M   +Q+   E + Q
Sbjct: 418 ACFFNGEPCDDVMRILEGCGFFPHVGIDRLAERSLLTISKEKRVEMQGFIQDAAREFINQ 477

Query: 455 ESIKDPGKRSRLWHPEDIYQVLNENTS----LPTGINLDSLKELYLGGCSNLKRFPEISC 510
            S     +R R W P  I  +L  + S    +  GI LD+ K  +               
Sbjct: 478 TS-----RRRRHWEPSRIRLLLENDKSKGNEVIEGIFLDTTKLTF--------------- 517

Query: 511 NIEDLDLKETAIEELPSSIGNLSRLVDLDLTNCSGLKS--VSSRLCNLKSLRRLNLSGCL 568
                D+   A E    ++ NL RL+ +  T+    +   ++  L +L    RL      
Sbjct: 518 -----DVNPMAFE----NMYNL-RLLKIYSTHSETAQELRLTKELRSLPYELRLLHWEKY 567

Query: 569 KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPEL--PCG 626
            L+ LP++      +E LN+     + +    K L+KL  + L + ++L  + EL   C 
Sbjct: 568 PLQSLPQDFDTRHLVE-LNMPYSQLQSLCVGTKSLAKLKMINLSHSQKLLEVDELAKACN 626

Query: 627 -SSIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNCSN 664
              I  + CTSLK++ ++  L     K+    N S C++
Sbjct: 627 LEKIDLQGCTSLKSIPHTDRL-----KNLQFLNLSGCTS 660


>gi|357513935|ref|XP_003627256.1| Resistance protein PRG [Medicago truncatula]
 gi|355521278|gb|AET01732.1| Resistance protein PRG [Medicago truncatula]
          Length = 809

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 194/603 (32%), Positives = 277/603 (45%), Gaps = 135/603 (22%)

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDESEKVGG----LANIHLN---------- 235
           + GIGKTTIA  ++  + S +E  YFM N+R+ESE+ G     L  I L+          
Sbjct: 1   MPGIGKTTIAEEVFRRLRSKYESCYFMANVREESERCGTNSLRLRKIILSTLLKEENLKD 60

Query: 236 --------FERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKN 287
                     ++RL RMKVLIV  D+ D +Q+++LIG +D   P SR+IITTRD Q+L  
Sbjct: 61  ELINGLPPLVKKRLHRMKVLIVLDDIKDAEQLEVLIGTVDWLGPRSRIIITTRDKQVL-- 118

Query: 288 HRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN-HPAAGFLELSNIVIKYANGVPLALQVL 346
               +V  ++EV+ L   +S  LF+ +AF ++ H    + ELS  ++ Y  GVPL L+ L
Sbjct: 119 --AGKVDDIYEVEPLDSAESFQLFNLHAFTKHEHLEMEYYELSKKMVDYTAGVPLVLKAL 176

Query: 347 GSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYL 406
            + L G  ++ WES    LK     ++  V ++ Y  LD  E+NI LD ACFF G    L
Sbjct: 177 ANLLCGKDKDIWESQAKILKIEQIENVHVVFRLIYTNLDSHEKNILLDIACFFDGLKLKL 236

Query: 407 VMNFLDAC--RFSAKIGISRLVGKSLVTISNNKI-TMHDLLQEMGGEIVRQESIKDPGKR 463
            +  L      +S    + RL  K+LVTIS   I +MHD++QE   EIVRQES+++PG R
Sbjct: 237 DLIKLLLKDRHYSVSTKLDRLKDKALVTISQQSIVSMHDIIQETAWEIVRQESVEEPGSR 296

Query: 464 SRLWHPEDIYQVLNENTS----LPTGINLDSLKELYL-----GGCSNLKRFPEISCN--- 511
           SRL +P+DIY VL ++          I L  +KEL+L        S LK F +I  N   
Sbjct: 297 SRLLNPDDIYHVLKDDKGGEAIRSMAIRLSEIKELHLSPRVFAKMSKLK-FLDIYTNGSQ 355

Query: 512 -----------------IEDLDLKETAIEELPS--SIGNLSRL----------------- 535
                            +  L  +   +E LPS  S  NL RL                 
Sbjct: 356 NEGRLSLPRGLEFLPNELRYLRWEYYPLESLPSKFSAENLVRLSLPYSRLKKLWNGVKDI 415

Query: 536 VDL---------------DLTNCSGLKSVSSRLC--------------------NLKSLR 560
           V+L               D +  + L+ ++ RLC                    +L SLR
Sbjct: 416 VNLNVLILSSSTFLTELPDFSKAASLEVINLRLCLKELDLSGCISLTSLQSNDTHLSSLR 475

Query: 561 RLNLSGCLKLEK--------------------LPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            L+L  C  +++                    LP  IG    LE L LA    + +P S+
Sbjct: 476 YLSLYNCTSVKEFSVTSKHMNILDLEGTSIKNLPSSIGLQTKLEKLYLAHTHIQSLPKSI 535

Query: 601 KQLSKLSDLRLQNCKRLQSLPELPCGSSI-HARHCTSLKTLSNSSTLLTRSSKHWDIFNF 659
           + L++L  L L  C  LQ+LPEL     I  A  C SL+ ++  ST   +  +      F
Sbjct: 536 RNLTRLRHLDLHLCSELQTLPELAQSLEILDACGCLSLENVAFRSTASEQLKEKRKRVIF 595

Query: 660 SNC 662
            NC
Sbjct: 596 WNC 598


>gi|262752410|gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helianthus annuus]
          Length = 1021

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 182/570 (31%), Positives = 274/570 (48%), Gaps = 87/570 (15%)

Query: 15  KHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDK-LNRGNEISPSLSSAIEGSKISI 73
           K DVFLSFRG+D R+NF  HL  AL    IETF DD+ +  G  + P L +AI+ S+ SI
Sbjct: 18  KFDVFLSFRGEDTRNNFTDHLLKALKEAAIETFFDDEEIQIGEFLKPELENAIKASRSSI 77

Query: 74  VIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----------------- 116
           ++ S+ YASS WCL+EL  I+E K      V P+FY V+PSD                  
Sbjct: 78  IVLSKDYASSTWCLDELALIMEQKRTSKHNVFPIFYHVNPSDVRKQRNSFGDAMADHKQR 137

Query: 117 ---------------------GYCPSLGWMGIFDIPTSESVLIEGNVNDISKKLSDLFPS 155
                                     +  M   +    E+ LIE  V DIS +L +L   
Sbjct: 138 RERESDEKKRSQLGKKTEKWKKALTEVAHMKGKEANGRETKLIEEIVKDISSRL-ELHKR 196

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTV-GIWGIGGIGKTTIASAIYSNISSHFEGSY 214
            +  +L+G+ES ++ I S L   S+    V  I+G+ GIGKT +A  I+ +    FE S 
Sbjct: 197 SDIPKLIGMESSVRTITSFLNDASSHTTDVLTIFGMAGIGKTHLADYIFKSHYLEFESSC 256

Query: 215 FMQNIRD-------------------ESEKVGGLANIHLNFER--RRLSRMKVLIVFYDL 253
           F+++I                     ++     + N+     +    L R +  +V   +
Sbjct: 257 FLEDIERRCTSQKRLLKLQKQLLKDIQATSWMDIDNVKAATSKIENSLFRKRTFLVLDGI 316

Query: 254 TDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHR-------GSRVGHVFEVKELSYND 306
            D + +D LIG   G  PGS++IIT+++  L +  +            H+     L+  D
Sbjct: 317 NDSEHLDALIGT-KGLHPGSKIIITSKNGSLTEKCKLFETQVPPKHTKHLLH--GLNDKD 373

Query: 307 SLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLK 366
           SL L + +AFG + P  G  +    V++Y  G PLAL+VLGS      +  WE  +  L 
Sbjct: 374 SLQLLTCHAFGCHEPNEGDKKEMKKVVQYCKGHPLALKVLGSSFCS-EDATWEDILESLG 432

Query: 367 RMPHMDIQKVLKVSYDGLDDE-EQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRL 425
           +  + DI+KVL++SYD L  E ++ +F   AC F G ++    + L AC      GI  L
Sbjct: 433 KEINPDIKKVLEISYDTLPSEKDKELFKYIACLFVGEERKFTEDILKACGICKPSGIKVL 492

Query: 426 VGKSLVTI-SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLN--ENTSL 482
           V + L+T+ S+ ++ MH LLQ+MG ++VRQES   P +RS L + E+   VL   + T++
Sbjct: 493 VNRCLLTVGSSGELMMHQLLQDMGRDVVRQESPNKPWERSILLNHEECLDVLQNKQGTTI 552

Query: 483 PTGINL-------DSLKELYLGGCSNLKRF 505
             G+ L       D+ KE       N+KRF
Sbjct: 553 IQGLVLLMRTFENDTCKE---PSSVNMKRF 579



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 3/116 (2%)

Query: 488 LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKE-TAIEELPSSIGNLSRLVDLDLTNCS 544
           L SLK L L  C  L R    S    ++ L L   T++ E+  SIG   +L  LDL+ C+
Sbjct: 693 LRSLKFLNLSNCHELVRVGHFSGLPLLKRLTLARCTSLIEVCESIGTCQKLEILDLSECN 752

Query: 545 GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSM 600
            LK +   +  LKSL +L + GC  L + P E+  +ESLE  N+  K      S+M
Sbjct: 753 KLKELPRSIGKLKSLTQLLVDGCSNLGEYPAEMKEMESLEADNVNMKSHGSSSSTM 808


>gi|359493561|ref|XP_002268895.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1080

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 172/516 (33%), Positives = 274/516 (53%), Gaps = 71/516 (13%)

Query: 161 LVGVESIIKEIESQLLSGSTEFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIR 220
           +VG++  ++E++S L     +   VGI+GIGGIGKTTIA  +Y++I   F G+ F++ ++
Sbjct: 1   MVGMDVHLEELKSLLKMQLDDVRMVGIYGIGGIGKTTIAKMVYNDILCQFNGASFLEGVK 60

Query: 221 DESE----------------KVGG---LANIH--LNFERRRLSRMKVLIVFYDLTDLKQI 259
           + S+                  GG   L +I+  +N  + RL   KVL+VFYD+ D  ++
Sbjct: 61  NRSQCNNDRLQLLQELLHGIMEGGHLKLESIYDGMNMIKGRLGSKKVLVVFYDVDDSDKV 120

Query: 260 DLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQN 319
             L+   + F PGSR+IITTRD QLL  +    V   +E K L   +++ LFS +AF   
Sbjct: 121 QRLVRSYEWFGPGSRIIITTRDKQLLDEYG---VHASYEAKVLEDKEAIELFSWHAFKVQ 177

Query: 320 HPAAGFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKVLKV 379
           +    ++++SN ++ YA G+PLAL+VLGS L   +++EW+SA+ KLK+ P+  I  +LK+
Sbjct: 178 NIREDYVDMSNRLVDYAKGLPLALEVLGSSLYNKTKDEWKSAIEKLKKNPNRKINDMLKI 237

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTISNNKIT 439
           S DGLDD +  +FLD ACF KG  +  ++  LD     A+  I  L  + L+TIS  ++ 
Sbjct: 238 SLDGLDDSQVEVFLDIACFLKGEAKDCILRILDD---HAEYDIRVLRDRCLITISATRVQ 294

Query: 440 MHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENTSL----------------- 482
           MHDL+Q+MG  I+R+   K P KR+RLW  +DI++ L+    +                 
Sbjct: 295 MHDLIQQMGWSIIRE---KHPSKRTRLWDIDDIHKALSAQEGMEQVEAISYDLSRSKDIQ 351

Query: 483 ---PTGINLDSLK--ELYLGG-----CSNLKRFPEISCNIEDLDLK-----ETAIEELPS 527
                  N+  L+  +LY G          K F    C     +L+        ++ LPS
Sbjct: 352 VNKKVYENMKKLRFLKLYWGDYHGSMTKTYKVFLPKDCEFPSQELRYLYWEAYPLQTLPS 411

Query: 528 SIGNLSRLVDLDLTNCS--------GLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGN 579
           +  N   LV+L + N +         +   +++L ++ +L  L L+ C +L+K PE  GN
Sbjct: 412 NF-NGENLVELHMRNSTIKQLWKGRKIAHQNAKLSSMPNLEELYLAFCERLKKFPEIRGN 470

Query: 580 LESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCK 615
           + SL  L L +   ++IPSS++ L  L  L L  C+
Sbjct: 471 MGSLRILYLGQSGIKEIPSSIEYLPALEFLTLWGCR 506



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 102/169 (60%), Gaps = 7/169 (4%)

Query: 482 LPTGIN-LDSLKELYLGGCSNLKRFPEIS--CNIEDLDLKETAIEELPSSIGNLSRLVDL 538
           LP     L++L+ LYL GCSN + FPEI    ++  L L ETAI+ELP SIG+L++L DL
Sbjct: 580 LPNAFGCLEALQFLYLSGCSNFEEFPEIQNMGSLRFLRLNETAIKELPCSIGHLTKLRDL 639

Query: 539 DLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDFEKIPS 598
           +L NC  L+S+ + +C LKSL  LN++GC  L   PE + +++ L  L L++    ++P 
Sbjct: 640 NLENCKNLRSLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPP 699

Query: 599 SMKQLSKLSDLRLQNCKRLQSLP----ELPCGSSIHARHCTSLKTLSNS 643
           S++ L  L  L L NC+ L +LP     L    S+  R+C+ L  L ++
Sbjct: 700 SIEHLKGLRRLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDN 748



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 107/201 (53%), Gaps = 31/201 (15%)

Query: 481 SLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIE---DLDLKETAIEE------------ 524
           SLP  I  L SL+ L + GCSNL  FPEI  +++   +L L +T I E            
Sbjct: 649 SLPNSICGLKSLEVLNINGCSNLVAFPEIMEDMKHLGELLLSKTPITELPPSIEHLKGLR 708

Query: 525 ------------LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLK-SLRRLNLSGC-LKL 570
                       LP+SIGNL+ L  L + NCS L ++   L +L+  LRRL+L+GC L  
Sbjct: 709 RLVLNNCENLVTLPNSIGNLTHLRSLCVRNCSKLHNLPDNLRSLQCCLRRLDLAGCNLMK 768

Query: 571 EKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGSSI- 629
             +P ++  L SL +L+++E     IP+++ QLS L  LR+ +C+ L+ +PELP    + 
Sbjct: 769 GAIPSDLWCLSSLRFLDVSESPIPCIPTNIIQLSNLRTLRMNHCQMLEEIPELPSRLEVL 828

Query: 630 HARHCTSLKTLSNSSTLLTRS 650
            A  C  + TLS  S+ L  S
Sbjct: 829 EAPGCPHVGTLSTPSSPLWSS 849



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 24/150 (16%)

Query: 474 QVLNENTSLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLS 533
           ++ ++N  L +  NL+   ELYL  C  LK+FPEI                     GN+ 
Sbjct: 436 KIAHQNAKLSSMPNLE---ELYLAFCERLKKFPEIR--------------------GNMG 472

Query: 534 RLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIGNLESLEYLNLAEKDF 593
            L  L L   SG+K + S +  L +L  L L GC   +K  +  GNL    ++   + D 
Sbjct: 473 SLRILYLGQ-SGIKEIPSSIEYLPALEFLTLWGCRNFDKFQDNFGNLRHRRFIQAKKADI 531

Query: 594 EKIPSSMKQLSKLSDLRLQNCKRLQSLPEL 623
           +++P+S   L    +L L +C  L++ PE+
Sbjct: 532 QELPNSFGYLESPQNLCLDDCSNLENFPEI 561


>gi|145337463|ref|NP_177427.2| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|110737528|dbj|BAF00706.1| hypothetical protein [Arabidopsis thaliana]
 gi|332197259|gb|AEE35380.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1042

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 182/522 (34%), Positives = 260/522 (49%), Gaps = 71/522 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R   VSHL  AL    + TF DD KL  G+ I+  L  AI+ S  ++V
Sbjct: 15  YDVFLSFRGVDTRQTIVSHLYVALRNNGVLTFKDDRKLEIGDTIADGLVKAIQTSWFAVV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC--------------P 120
           I SE YA+S WCL EL  I++  ++    V+P+FY V PSD  Y               P
Sbjct: 75  ILSENYATSTWCLEELRLIMQLHSEEQIKVLPIFYGVKPSDVRYQEGSFATAFQRYEADP 134

Query: 121 SL-----GWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
            +      W        +           E+ +I   V  IS +L  +  +D  + LVG+
Sbjct: 135 EMEEKVSKWRRALTQVANLSGKHSRNCVDEADMIAEVVGGISSRLPRMKSTDLIN-LVGM 193

Query: 165 ESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           E+ + ++   L  G   E + +GIWG+GGIGK+TIA  +Y   S  F    F++N+    
Sbjct: 194 EAHMMKMTLLLNIGCEDEVHMIGIWGMGGIGKSTIAKCLYDRFSRQFPAHCFLENVSK-- 251

Query: 224 EKVGGLANIHLNFE-----------------------RRRLSRMKVLIVFYDLTDLKQID 260
               G    HL  E                       + RL   KV +V  ++  ++Q+ 
Sbjct: 252 ----GYDIKHLQKELLSHILYDEDVELWSMEAGSQEIKERLGHQKVFVVLDNVDKVEQLH 307

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L      F PGSR+IITTRD  LL +     V +++EVK L   D+L +F + AFG   
Sbjct: 308 GLAKDPSWFGPGSRIIITTRDKGLLNS---CGVNNIYEVKCLDDKDALQVFKKLAFGGRP 364

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGM-SEEEWESAVNKLKRMPHMDIQKVLKV 379
           P+ GF +L     + A+G+P AL    S+L  + + +EWE  +  L+  P  ++Q++L+ 
Sbjct: 365 PSDGFEQLFIRASRLAHGLPSALVAFASHLSAIVAIDEWEDELALLETFPQKNVQEILRA 424

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKI 438
           SYDGLD  ++ +FL  ACFF G     +  FL  C       I+ L  K LV IS +  I
Sbjct: 425 SYDGLDQYDKTVFLHVACFFNGGHLRYIRAFLKNC----DARINHLAAKCLVNISIDGCI 480

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           +MH LL + G EIVRQES   P K+  LW P +I+ VL+ NT
Sbjct: 481 SMHILLVQTGREIVRQESDWRPSKQRFLWDPTEIHYVLDSNT 522



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 30/215 (13%)

Query: 469  PEDIYQVL---------NENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLK 518
            PEDI Q+          N+   LPT +  L  LK L L  C  LK  P++S  +E L L 
Sbjct: 810  PEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQLS-QVERLVL- 867

Query: 519  ETAIEELPSSIGNLS----RLVDLDLTNCSGLKSVSSRLCNLKS------LRRLNLSGCL 568
             +   +L S +G L      L+D  +  C  L S+   L   KS      L  L+L  C 
Sbjct: 868  -SGCVKLGSLMGILGAGRYNLLDFCVEKCKSLGSLMGILSVEKSAPGRNELLELSLENCK 926

Query: 569  KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
             L  L EE+ +   L YL+L+  +F +IP+S+++LS +  L L NC ++ SL +LP    
Sbjct: 927  SLVSLSEELSHFTKLTYLDLSSLEFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLK 986

Query: 628  SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
             ++A  C SL+ ++ SS     S  H D   FS+C
Sbjct: 987  YLYAHGCESLEHVNFSS---NHSFNHLD---FSHC 1015



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
           L +E +PE+I  L+ LE L+L   DF  +P+SM QL+ L  L L NC+RL++LP+L    
Sbjct: 804 LNIEDIPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQLSQVE 863

Query: 628 SIHARHCTSLKTL 640
            +    C  L +L
Sbjct: 864 RLVLSGCVKLGSL 876


>gi|334183877|ref|NP_001185386.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
 gi|332197260|gb|AEE35381.1| TIR-NBS-LRR class disease resistance protein [Arabidopsis thaliana]
          Length = 1183

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 182/522 (34%), Positives = 260/522 (49%), Gaps = 71/522 (13%)

Query: 16  HDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDD-KLNRGNEISPSLSSAIEGSKISIV 74
           +DVFLSFRG D R   VSHL  AL    + TF DD KL  G+ I+  L  AI+ S  ++V
Sbjct: 15  YDVFLSFRGVDTRQTIVSHLYVALRNNGVLTFKDDRKLEIGDTIADGLVKAIQTSWFAVV 74

Query: 75  IFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYC--------------P 120
           I SE YA+S WCL EL  I++  ++    V+P+FY V PSD  Y               P
Sbjct: 75  ILSENYATSTWCLEELRLIMQLHSEEQIKVLPIFYGVKPSDVRYQEGSFATAFQRYEADP 134

Query: 121 SL-----GWMGIFDIPTS-----------ESVLIEGNVNDISKKLSDLFPSDNKDQLVGV 164
            +      W        +           E+ +I   V  IS +L  +  +D  + LVG+
Sbjct: 135 EMEEKVSKWRRALTQVANLSGKHSRNCVDEADMIAEVVGGISSRLPRMKSTDLIN-LVGM 193

Query: 165 ESIIKEIESQLLSGST-EFNTVGIWGIGGIGKTTIASAIYSNISSHFEGSYFMQNIRDES 223
           E+ + ++   L  G   E + +GIWG+GGIGK+TIA  +Y   S  F    F++N+    
Sbjct: 194 EAHMMKMTLLLNIGCEDEVHMIGIWGMGGIGKSTIAKCLYDRFSRQFPAHCFLENVSK-- 251

Query: 224 EKVGGLANIHLNFE-----------------------RRRLSRMKVLIVFYDLTDLKQID 260
               G    HL  E                       + RL   KV +V  ++  ++Q+ 
Sbjct: 252 ----GYDIKHLQKELLSHILYDEDVELWSMEAGSQEIKERLGHQKVFVVLDNVDKVEQLH 307

Query: 261 LLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAFGQNH 320
            L      F PGSR+IITTRD  LL +     V +++EVK L   D+L +F + AFG   
Sbjct: 308 GLAKDPSWFGPGSRIIITTRDKGLLNS---CGVNNIYEVKCLDDKDALQVFKKLAFGGRP 364

Query: 321 PAAGFLELSNIVIKYANGVPLALQVLGSYLKGM-SEEEWESAVNKLKRMPHMDIQKVLKV 379
           P+ GF +L     + A+G+P AL    S+L  + + +EWE  +  L+  P  ++Q++L+ 
Sbjct: 365 PSDGFEQLFIRASRLAHGLPSALVAFASHLSAIVAIDEWEDELALLETFPQKNVQEILRA 424

Query: 380 SYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVTIS-NNKI 438
           SYDGLD  ++ +FL  ACFF G     +  FL  C       I+ L  K LV IS +  I
Sbjct: 425 SYDGLDQYDKTVFLHVACFFNGGHLRYIRAFLKNC----DARINHLAAKCLVNISIDGCI 480

Query: 439 TMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQVLNENT 480
           +MH LL + G EIVRQES   P K+  LW P +I+ VL+ NT
Sbjct: 481 SMHILLVQTGREIVRQESDWRPSKQRFLWDPTEIHYVLDSNT 522



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 30/215 (13%)

Query: 469  PEDIYQVL---------NENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISCNIEDLDLK 518
            PEDI Q+          N+   LPT +  L  LK L L  C  LK  P++S  +E L L 
Sbjct: 810  PEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQLS-QVERLVL- 867

Query: 519  ETAIEELPSSIGNLS----RLVDLDLTNCSGLKSVSSRLCNLKS------LRRLNLSGCL 568
             +   +L S +G L      L+D  +  C  L S+   L   KS      L  L+L  C 
Sbjct: 868  -SGCVKLGSLMGILGAGRYNLLDFCVEKCKSLGSLMGILSVEKSAPGRNELLELSLENCK 926

Query: 569  KLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-S 627
             L  L EE+ +   L YL+L+  +F +IP+S+++LS +  L L NC ++ SL +LP    
Sbjct: 927  SLVSLSEELSHFTKLTYLDLSSLEFRRIPTSIRELSFMRTLYLNNCNKIFSLTDLPESLK 986

Query: 628  SIHARHCTSLKTLSNSSTLLTRSSKHWDIFNFSNC 662
             ++A  C SL+ ++ SS     S  H D   FS+C
Sbjct: 987  YLYAHGCESLEHVNFSS---NHSFNHLD---FSHC 1015



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 568 LKLEKLPEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCGS 627
           L +E +PE+I  L+ LE L+L   DF  +P+SM QL+ L  L L NC+RL++LP+L    
Sbjct: 804 LNIEDIPEDICQLQLLETLDLGGNDFVYLPTSMGQLAMLKYLSLSNCRRLKALPQLSQVE 863

Query: 628 SIHARHCTSLKTL 640
            +    C  L +L
Sbjct: 864 RLVLSGCVKLGSL 876


>gi|297794741|ref|XP_002865255.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311090|gb|EFH41514.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1260

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 168/494 (34%), Positives = 253/494 (51%), Gaps = 62/494 (12%)

Query: 26  DVRHNFVSHLNAALCREKIETFI-----DDKLNRGNEISPSLSSAIEGSKISIVIFSEGY 80
           +VR++FVSHL+ AL R+ I   +     DD L++ +E      + IE +++S++I S   
Sbjct: 18  EVRYSFVSHLSEALRRKGINNVVIEVEGDDLLSKESE------AKIEKARVSVMILSRIC 71

Query: 81  ASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDAGYCPSLGWMGIFDIP--------- 131
             +R C ++  K+ E +    Q+VVPV Y   PS       L W+ + D+          
Sbjct: 72  EPTRAC-HKFEKVRECQRNKNQVVVPVLYGESPS------LLDWISVLDLKDLSAIHHSR 124

Query: 132 --TSESVLIEGNVNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIWG 189
              S+S L++  V D+ +KL            +G+ S + EIE+ +         VGIWG
Sbjct: 125 MECSDSKLVQEIVRDVYEKLF-------YKGRIGIYSKLLEIENMVNKQPIGIRCVGIWG 177

Query: 190 IGGIGKTTIASAIYSNISSHFEGSYFMQNIRDE---------------SEKVGGLANI-H 233
           + GIGKTT+A A++  +SS F+ S F+++                    E  G  A I  
Sbjct: 178 MPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKAFHEKGLYCLLEEQLFKENPGNDATIMK 237

Query: 234 LNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNHRGSRV 293
           L+  R RL+  +VL+V  D+ +    +  +   D   PGS +IIT+RD Q+    R   +
Sbjct: 238 LSSLRDRLNSKRVLVVLDDVRNALVAESFLEGFDWLGPGSLIIITSRDKQVF---RLCGI 294

Query: 294 GHVFEVKELSYNDSLTLFSRNA-FGQNHPAAGFLELSNIVIKYANGVPLALQVLGSYLKG 352
             ++EV+ L+  ++L LF   A  G+ +      ELS  V+ YANG PLA+ V G  LKG
Sbjct: 295 NQIYEVQGLNEKEALQLFLLCASMGEQN----LHELSMKVVNYANGNPLAISVYGRELKG 350

Query: 353 MSE-EEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL 411
             +  E E+A  KLKR P   I    K SYD L D E+NIFLD ACFF+G +   V+  L
Sbjct: 351 KKKLSEMETAFLKLKRRPPFKIFDAFKSSYDSLCDNEKNIFLDIACFFQGENVNYVIQLL 410

Query: 412 DACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPED 471
           + C F   + I  LV K LVTIS N++ +H+L Q++G EI+  E+++   +R RLW P  
Sbjct: 411 EGCGFFPHVEIDVLVEKCLVTISENRVWLHNLTQDVGREIINGETVQIE-RRRRLWEPWS 469

Query: 472 IYQVLNENTSLPTG 485
           I  +L  N     G
Sbjct: 470 IKYLLEYNEHKACG 483



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 373  IQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFLDACRFSAKIGISRLVGKSLVT 432
            +++VL+VSYD L + ++ +FL  +  F   D  LV   +         G+  L   SL++
Sbjct: 1052 VKEVLRVSYDDLQEMDKVLFLYISSLFNDEDVDLVAPLIAGIDLDVSSGLKVLADVSLIS 1111

Query: 433  ISNN-KITMHDLLQEMGGEIVRQESI 457
            IS+N +I MH L+++MG EI+ ++S+
Sbjct: 1112 ISSNGEIVMHCLVRQMGKEILHEQSM 1137


>gi|297791225|ref|XP_002863497.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309332|gb|EFH39756.1| hypothetical protein ARALYDRAFT_916959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 846

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 227/755 (30%), Positives = 337/755 (44%), Gaps = 139/755 (18%)

Query: 2   ASSSSSINMIPHPKHDVFLSFRGKDVRHNFVSHLNAALCREKIETFIDDKLNRGNEISPS 61
            SS S+++  P P+H VF++FRG D+R  FVSHL  AL    I  FIDD  +RG  +   
Sbjct: 3   TSSISTVDDQP-PQHQVFINFRGADLRLRFVSHLVTALKLNNINVFIDDYEDRGQPLD-V 60

Query: 62  LSSAIEGSKISIVIFSEGYASSRWCLNELVKILESKNKYGQIVVPVFYLVDPSDA----- 116
           L   IE SKI + IFS  Y  S WC+ EL KI +  ++   + +P+FY ++PS       
Sbjct: 61  LLKRIEESKIVLAIFSGNYTESIWCVRELEKIKDCTDEGTLVAIPIFYKLEPSTVRDLKG 120

Query: 117 -----------GYCPSLGWMGIFD-IPTSESVLIEGN------VNDISKKLSDLF---PS 155
                      G      W   F+ IP    + I+        VN+I K +       PS
Sbjct: 121 KFGDRFRSMAKGDERKKKWKEAFNLIPNIMGITIDKKSVESEKVNEIVKAVKTALTGIPS 180

Query: 156 DNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW----GIGGIGKTTIASAIYSNISSHFE 211
                 V VE++            T  NT   +    G+ GIGKTT+   +Y      F 
Sbjct: 181 KGSQNAV-VEALGNGNAGTSSRSWTFINTRDSYHWSFGMPGIGKTTLLKELYKTWQGKFT 239

Query: 212 GSYFMQNIRDESEKVGGLANIHLNFER---------RRLSRMKVLIVFYDLTDLKQIDLL 262
               +  IR +S+        HL  +R          +L   KVL+V  D++  +QID L
Sbjct: 240 RHALIDQIRVKSK--------HLELDRLPQMLLDPYSQLHERKVLVVLDDVSKREQIDAL 291

Query: 263 IGRLDGFVPG---SRVIITTRDVQLLKNHRGSRVGHVFEVKELSYNDSLTLFSRNAF--G 317
              LD    G   SRV+I T DV L        V   + V+ L++ DSL LF  +AF   
Sbjct: 292 REILDWIKEGKEGSRVVIATSDVSL----TNGLVDDTYMVQNLNHRDSLQLFHYHAFIDD 347

Query: 318 QNHPAA-GFLELSNIVIKYANGVPLALQVLGSYLKGMSEEEWESAVNKLKRMPHMDIQKV 376
           Q +P    F++LS   + YA G PL+L++LG  L   + + W S + KL + P  +I  V
Sbjct: 348 QANPQKKDFMKLSEGFVHYARGHPLSLKILGGELNKKNMDHWNSKMKKLAQSPCPNIVSV 407

Query: 377 LKVSYDGLDDEEQNIFLDTACFFKGNDQYLVMNFL---DACRFSAKIGISRLVGKSLVTI 433
            +VSYD L  E+++ FLD AC F+  D+  V + L   D     A   +  L  K L+  
Sbjct: 408 FQVSYDELTSEQKDAFLDIAC-FRSQDKNYVESLLASSDLGSAEAMSAVKSLTDKFLINT 466

Query: 434 SNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWHPEDIYQ-----VLNENTSLPT--GI 486
            + ++ MHDLL +   E+  + S +D  ++ RLW  +DI +     VL          GI
Sbjct: 467 CDGRVEMHDLLYKFSRELDLKASNQDGSRQRRLWLHQDIIKGGIINVLQNKMKAANVRGI 526

Query: 487 NLD--------SLKELYLGGCSNLKRFPEIS-------CNIEDLDLKETAIEEL------ 525
            LD        SL ++    C +  +FP  +        N+ DL L  + IE+L      
Sbjct: 527 FLDLSEVKDETSLDQVR---CLHWLKFPLETLPNDFNPINLVDLRLPYSEIEQLWDGDKD 583

Query: 526 -P----------------SSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCL 568
            P                S +    +L  L+L  C+ LK++   +  +K L  LNL GC 
Sbjct: 584 TPCLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKALPHDMKKMKMLAFLNLKGCT 643

Query: 569 KLEKLPEEIGNLESLEYLNLAE----KDF-----------------EKIPSSMKQLSKLS 607
            LE LPE   NL SL+ L L+     K+F                  ++P++M++L +L 
Sbjct: 644 SLESLPE--MNLISLKTLTLSGCSTFKEFPLISDNIETLYLDGTAISQLPTNMEKLQRLV 701

Query: 608 DLRLQNCKRLQSLP----ELPCGSSIHARHCTSLK 638
            L +++CK L+ +P    EL     +    C +LK
Sbjct: 702 VLNMKDCKMLEEIPGRVGELKALQELILSDCLNLK 736



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 98/180 (54%), Gaps = 20/180 (11%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           SLP  +NL SLK L L GCS  K FP IS NIE L L  TAI +LP+++  L RLV L++
Sbjct: 647 SLPE-MNLISLKTLTLSGCSTFKEFPLISDNIETLYLDGTAISQLPTNMEKLQRLVVLNM 705

Query: 541 TNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLP-----------------EEIGNLESL 583
            +C  L+ +  R+  LK+L+ L LS CL L+  P                 E +  L SL
Sbjct: 706 KDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEINMSSLNILLLDGTAIEVMPQLPSL 765

Query: 584 EYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQSLPELPCG-SSIHARHCTSLKTLS 641
           +YL L+       +P  + QLS+L  L L+ C  L S+PE P     + A  C+SLKT+S
Sbjct: 766 QYLCLSRNAKISYLPDGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVS 825



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 51/114 (44%), Gaps = 28/114 (24%)

Query: 488 LDSLKELYLGGCSNLKRFPEI---SCNIEDLDLKETAIE--------------------E 524
           L +L+EL L  C NLK FPEI   S NI  L L  TAIE                     
Sbjct: 721 LKALQELILSDCLNLKIFPEINMSSLNI--LLLDGTAIEVMPQLPSLQYLCLSRNAKISY 778

Query: 525 LPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKLPEEIG 578
           LP  I  LS+L  LDL  C+ L SV     NL+    L+  GC  L+ + +  G
Sbjct: 779 LPDGISQLSQLKWLDLKYCTSLTSVPEFPPNLQC---LDAHGCSSLKTVSKPPG 829


>gi|227438197|gb|ACP30588.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1108

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 193/663 (29%), Positives = 326/663 (49%), Gaps = 93/663 (14%)

Query: 31  FVSHLNAALCREKIETFIDDKLNRGNEISPSLSSA-IEGSKISIVIFSEGYASSRWCLNE 89
           F+S+++  LC             R +    +L+   +  S++ I+IFS+ YASSR C  E
Sbjct: 250 FISYISKELCHRGFTPL------RCDLTKSTLTGGMLHRSRVGIIIFSKNYASSRQCQGE 303

Query: 90  LVKILESKNKYGQIVVPVFYLVDPSD--------------------AGYCPSLGWMGIFD 129
            V I++       +++PVF+ V  +D                        P+L  +  + 
Sbjct: 304 FVAIMDHSKANSLVLLPVFFKVKVTDIRGQNGSFGRAFSRLEDSVQGSQVPTLTSINKYQ 363

Query: 130 IPTSESVLIEGN-VNDISKKLSDLFPSDNKDQLVGVESIIKEIESQLLSGSTEFNTVGIW 188
               E V++  N V+D+   LS    S++  +L G   +   +     S S+  + VG+W
Sbjct: 364 YMKGEEVILAKNIVSDVCLLLS----SESNMKLRGRLQMNSILSLLKFSQSSAPHIVGLW 419

Query: 189 GIGGIGKTTIASAIYSNISSHFEGSYFM------------QNIRDE-------SEKVG-G 228
           G+ GIGKTTI+  I+   +  ++  YF+             ++RDE        EKV  G
Sbjct: 420 GMAGIGKTTISREIFRTQAERYDVCYFLPDFHIVCQTRGLSHLRDEFFSIISGEEKVTVG 479

Query: 229 LANIHLNFERRRLSRMKVLIVFYDLTDLKQIDLLIGRLDGFVPGSRVIITTRDVQLLKNH 288
             +  L F R R    KVLIV   +++ ++ + L+G    F  G  +I+T+R+ Q+L   
Sbjct: 480 ACDTKLGFIRDRFLSKKVLIVLDGVSNAREAEFLLGGFGWFSGGHTLILTSRNRQVLIQ- 538

Query: 289 RGSRVGHVFEVKELSYNDSLTLFSRNAFGQNHPAAGFLELSNIVIKYANGVPLALQVLGS 348
                  ++E++ LS ++SL L S+  F       G   L + ++ YA+G+PLAL  LGS
Sbjct: 539 --CNAKEIYEIQNLSEHESLHLCSQ--FVSEQIWTGRTPLVSELVYYASGIPLALCALGS 594

Query: 349 YLKGMSEEEWESAVNKLKRMPHMDIQKVLKVSYDGLDDEEQNIFLDTACFFKGNDQYLVM 408
            L+    ++ +  + +L++ P ++IQ   K S++ LD  E+N FLD ACFF+G ++  V+
Sbjct: 595 SLQNQCIDDEKQHLKRLRQHPLVEIQDAFKRSFNVLDSNEKNTFLDFACFFRGGNKDHVV 654

Query: 409 NFLDACRFSAKIGISRLVGKSLVTISNNKITMHDLLQEMGGEIVRQESIKDPGKRSRLWH 468
           N LD C F  ++GI  L+ +SL+++  N+I   ++ Q+ G  +VRQE+  + GKRSRLW 
Sbjct: 655 NILDGCGFLTELGIYGLLDESLISLVGNRIETPNIFQDAGRFVVRQEN-NERGKRSRLWD 713

Query: 469 PEDIYQVLNEN--TSLPTGINLDS-------------------LKELYLGGCSNLKR--F 505
           P DI  VL  N  T    GI LD+                   L +LY     N  +   
Sbjct: 714 PTDIVDVLTNNSGTEAIEGIFLDASCLTFELSPTAFEKMYRLRLLKLYCPTSDNSCKVSL 773

Query: 506 PEISCNIEDLDLKETAIEELPSSIGNLSR------LVDLDLTNCSGLKSVSSRLCNLKSL 559
           P+   ++ D +L+    E  P  +G+L R      +V+L++   S +  +     NL+ L
Sbjct: 774 PQGLYSLPD-ELRLLHWERYP--LGSLPRNFNPKNIVELNMPY-SNMTKLWKGTKNLEKL 829

Query: 560 RRLNLSGCLKLEKLPEEIGNLESLEYLNLAE-KDFEKIPSSMKQLSKLSDLRLQNCKRLQ 618
           +R+ LS   +L K P  +   ++LE+++L       K+ SS++   KL+ L L++C RL+
Sbjct: 830 KRIILSHSRQLTKFP-SLSKAKNLEHIDLEGCTSLVKVNSSIRHHQKLTFLTLKDCSRLR 888

Query: 619 SLP 621
           S+P
Sbjct: 889 SMP 891



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 11/168 (6%)

Query: 461 GKRSRLWHPEDIYQV---LNENTSLPTGI-NLDSLKELYLGGCSNLKRFPEISC--NIED 514
           G   R ++P++I ++    +  T L  G  NL+ LK + L     L +FP +S   N+E 
Sbjct: 795 GSLPRNFNPKNIVELNMPYSNMTKLWKGTKNLEKLKRIILSHSRQLTKFPSLSKAKNLEH 854

Query: 515 LDLKE-TAIEELPSSIGNLSRLVDLDLTNCSGLKSVSSRLCNLKSLRRLNLSGCLKLEKL 573
           +DL+  T++ ++ SSI +  +L  L L +CS L+S+ + + +L++L  LNLSGC +LE L
Sbjct: 855 IDLEGCTSLVKVNSSIRHHQKLTFLTLKDCSRLRSMPATV-HLEALEVLNLSGCSELEDL 913

Query: 574 PEEIGNLESLEYLNLAEKDFEKIPSSMKQLSKLSDLRLQNCKRLQSLP 621
            +   NL  L    LA     ++PSS+  L++L  L L+NC  LQ LP
Sbjct: 914 QDFSPNLSEL---YLAGTAITEMPSSIGGLTRLVTLDLENCNELQHLP 958



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 54/79 (68%)

Query: 481 SLPTGINLDSLKELYLGGCSNLKRFPEISCNIEDLDLKETAIEELPSSIGNLSRLVDLDL 540
           S+P  ++L++L+ L L GCS L+   + S N+ +L L  TAI E+PSSIG L+RLV LDL
Sbjct: 889 SMPATVHLEALEVLNLSGCSELEDLQDFSPNLSELYLAGTAITEMPSSIGGLTRLVTLDL 948

Query: 541 TNCSGLKSVSSRLCNLKSL 559
            NC+ L+ +   + NLK++
Sbjct: 949 ENCNELQHLPPEISNLKAV 967


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.135    0.390 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,896,702,295
Number of Sequences: 23463169
Number of extensions: 411249321
Number of successful extensions: 1461806
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10305
Number of HSP's successfully gapped in prelim test: 14442
Number of HSP's that attempted gapping in prelim test: 1290726
Number of HSP's gapped (non-prelim): 103967
length of query: 664
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 515
effective length of database: 8,863,183,186
effective search space: 4564539340790
effective search space used: 4564539340790
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)