Query 006019
Match_columns 664
No_of_seqs 491 out of 4547
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 13:48:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006019.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006019hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 1.7E-53 6E-58 440.1 13.9 254 365-638 21-306 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 2.9E-52 1E-56 429.1 18.3 248 374-642 17-293 (299)
3 4aoj_A High affinity nerve gro 100.0 9.6E-52 3.3E-56 431.1 21.5 247 374-641 45-322 (329)
4 3omv_A RAF proto-oncogene seri 100.0 1.3E-51 4.3E-56 424.5 20.1 251 373-641 39-303 (307)
5 4ase_A Vascular endothelial gr 100.0 1.8E-49 6.2E-54 417.2 12.3 258 366-641 60-350 (353)
6 3hmm_A TGF-beta receptor type- 100.0 2.2E-48 7.7E-53 402.5 17.0 250 374-639 7-298 (303)
7 4b9d_A Serine/threonine-protei 100.0 1.1E-47 3.7E-52 400.8 18.1 239 374-631 28-276 (350)
8 3fpq_A Serine/threonine-protei 100.0 3.2E-47 1.1E-51 388.9 21.2 242 374-631 30-282 (290)
9 4g3f_A NF-kappa-beta-inducing 100.0 3.4E-47 1.2E-51 395.3 15.4 239 375-639 63-317 (336)
10 4fih_A Serine/threonine-protei 100.0 2E-46 6.7E-51 390.7 17.0 236 374-631 78-323 (346)
11 3hyh_A Carbon catabolite-derep 100.0 2E-45 6.9E-50 372.3 18.0 237 373-631 16-262 (275)
12 4fie_A Serine/threonine-protei 100.0 4.3E-45 1.5E-49 389.9 19.7 236 374-631 155-400 (423)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.7E-46 2E-50 381.5 11.0 237 373-630 35-283 (311)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-45 5.5E-50 378.1 9.0 232 373-626 27-271 (304)
15 4g31_A Eukaryotic translation 100.0 3.4E-44 1.2E-48 369.5 14.3 238 374-631 9-279 (299)
16 4b99_A Mitogen-activated prote 100.0 2.2E-41 7.4E-46 361.9 17.6 248 374-631 58-344 (398)
17 2qkw_B Protein kinase; three-h 100.0 3.1E-41 1.1E-45 352.9 18.0 256 375-640 44-317 (321)
18 2nru_A Interleukin-1 receptor- 100.0 4.8E-40 1.6E-44 341.4 23.2 273 359-638 12-306 (307)
19 3uim_A Brassinosteroid insensi 100.0 5.2E-41 1.8E-45 351.8 15.7 271 359-636 17-309 (326)
20 3p86_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 343.3 19.5 251 374-641 41-301 (309)
21 4f9c_A Cell division cycle 7-r 100.0 3.4E-40 1.2E-44 348.8 17.7 183 374-572 25-251 (361)
22 3uto_A Twitchin; kinase, muscl 100.0 6.6E-40 2.3E-44 367.3 20.7 240 373-631 160-410 (573)
23 1qcf_A Haematopoetic cell kina 100.0 2.8E-40 9.5E-45 362.3 16.7 245 373-640 191-446 (454)
24 2psq_A Fibroblast growth facto 100.0 3.5E-40 1.2E-44 351.8 15.8 247 374-640 85-366 (370)
25 3kul_A Ephrin type-A receptor 100.0 1.4E-39 4.8E-44 341.0 18.7 248 373-641 52-316 (325)
26 3cbl_A C-FES, proto-oncogene t 100.0 3.7E-40 1.3E-44 352.6 13.9 244 374-638 118-374 (377)
27 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8E-40 2.7E-44 358.4 16.6 247 374-643 188-445 (452)
28 1k9a_A Carboxyl-terminal SRC k 100.0 6.6E-40 2.3E-44 358.8 15.9 243 374-639 197-446 (450)
29 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-40 3.8E-45 369.1 9.4 245 372-638 222-478 (495)
30 2qol_A Ephrin receptor; recept 100.0 9E-40 3.1E-44 348.9 16.0 244 374-638 49-309 (373)
31 3tt0_A Basic fibroblast growth 100.0 1.3E-39 4.4E-44 349.1 16.7 270 372-661 71-375 (382)
32 3ugc_A Tyrosine-protein kinase 100.0 8E-40 2.8E-44 337.7 14.3 257 373-640 13-293 (295)
33 3v5w_A G-protein coupled recep 100.0 1.2E-39 4.1E-44 363.0 15.8 240 375-631 194-449 (689)
34 4hcu_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 328.1 18.0 243 374-639 14-267 (269)
35 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-39 8.8E-44 336.5 17.1 246 374-639 14-283 (310)
36 3lb7_A RAF proto-oncogene seri 100.0 1.6E-39 5.4E-44 337.8 15.4 252 372-641 38-303 (307)
37 2c30_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 332.1 22.9 251 360-632 23-295 (321)
38 3soc_A Activin receptor type-2 100.0 2.8E-39 9.7E-44 338.2 16.4 247 374-638 28-318 (322)
39 3kmu_A ILK, integrin-linked ki 100.0 3.7E-39 1.3E-43 327.9 16.3 250 374-638 14-270 (271)
40 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-39 7.7E-44 362.0 15.5 246 373-641 270-526 (535)
41 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.5E-39 8.4E-44 329.2 13.5 244 373-639 11-265 (268)
42 1luf_A Muscle-specific tyrosin 100.0 9.9E-39 3.4E-43 336.7 18.4 247 374-640 51-337 (343)
43 4f0f_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 325.7 19.4 248 374-636 23-287 (287)
44 3gen_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 331.0 13.1 242 374-638 28-280 (283)
45 3fe3_A MAP/microtubule affinit 100.0 1.6E-38 5.5E-43 333.1 18.3 237 374-632 19-265 (328)
46 3c1x_A Hepatocyte growth facto 100.0 3.6E-39 1.2E-43 344.0 13.6 251 374-644 93-361 (373)
47 3poz_A Epidermal growth factor 100.0 3.4E-39 1.2E-43 338.4 12.9 243 374-638 19-278 (327)
48 2eva_A TAK1 kinase - TAB1 chim 100.0 3.2E-38 1.1E-42 327.9 20.1 248 374-643 12-268 (307)
49 3l9p_A Anaplastic lymphoma kin 100.0 1.5E-38 5E-43 338.9 17.5 247 373-639 74-346 (367)
50 3fxz_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 327.3 18.5 236 374-631 24-269 (297)
51 4eqm_A Protein kinase; transfe 100.0 3.9E-38 1.3E-42 325.1 19.5 251 374-640 15-277 (294)
52 2ozo_A Tyrosine-protein kinase 100.0 6.8E-39 2.3E-43 363.3 15.0 240 377-638 343-598 (613)
53 1rjb_A FL cytokine receptor; k 100.0 2.3E-38 7.9E-43 334.3 16.9 254 373-645 48-341 (344)
54 3zgw_A Maternal embryonic leuc 100.0 2.2E-38 7.5E-43 334.2 16.4 236 374-632 14-261 (347)
55 3q4u_A Activin receptor type-1 100.0 3.1E-38 1E-42 326.6 16.4 243 374-636 12-300 (301)
56 3qup_A Tyrosine-protein kinase 100.0 8.3E-39 2.8E-43 334.6 12.2 252 373-641 26-301 (323)
57 3kfa_A Tyrosine-protein kinase 100.0 3.7E-39 1.3E-43 331.4 9.3 251 366-638 9-271 (288)
58 1mp8_A Focal adhesion kinase 1 100.0 1.2E-38 4.1E-43 326.6 13.0 244 373-638 18-276 (281)
59 3og7_A AKAP9-BRAF fusion prote 100.0 1.7E-38 5.7E-43 327.0 14.1 249 372-638 26-288 (289)
60 3t9t_A Tyrosine-protein kinase 100.0 4.2E-38 1.4E-42 319.7 16.8 242 374-638 12-264 (267)
61 4fl3_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42 357.8 18.7 240 376-637 375-630 (635)
62 3op5_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 342.3 10.3 258 374-639 39-330 (364)
63 3vhe_A Vascular endothelial gr 100.0 1.8E-38 6.1E-43 337.1 14.5 248 374-639 26-356 (359)
64 4euu_A Serine/threonine-protei 100.0 1.7E-37 5.9E-42 324.1 21.7 259 374-638 13-309 (319)
65 3ork_A Serine/threonine protei 100.0 4.1E-38 1.4E-42 327.7 16.8 256 374-644 16-287 (311)
66 1qpc_A LCK kinase; alpha beta 100.0 1.6E-38 5.4E-43 325.2 13.5 247 373-642 16-273 (279)
67 2ivs_A Proto-oncogene tyrosine 100.0 1.6E-38 5.4E-43 330.8 13.3 245 374-638 27-311 (314)
68 2pvf_A Fibroblast growth facto 100.0 2.2E-38 7.5E-43 333.2 14.4 251 372-642 37-322 (334)
69 3dtc_A Mitogen-activated prote 100.0 7.3E-38 2.5E-42 318.7 17.2 245 374-636 11-271 (271)
70 1t46_A HOMO sapiens V-KIT hard 100.0 2.3E-38 7.7E-43 329.5 13.6 251 372-641 25-310 (313)
71 3c0i_A Peripheral plasma membr 100.0 1.2E-37 4.1E-42 329.8 19.2 247 371-631 25-286 (351)
72 2yab_A Death-associated protei 100.0 2.3E-37 7.8E-42 328.3 21.3 244 373-631 15-272 (361)
73 2y0a_A Death-associated protei 100.0 2.7E-37 9.2E-42 323.7 21.2 245 372-631 13-271 (326)
74 2wqm_A Serine/threonine-protei 100.0 2.8E-37 9.5E-42 321.1 20.8 254 374-642 36-301 (310)
75 1tki_A Titin; serine kinase, m 100.0 1.5E-37 5.1E-42 324.9 18.8 238 374-631 9-257 (321)
76 3kex_A Receptor tyrosine-prote 100.0 9.7E-39 3.3E-43 334.6 9.7 243 374-638 17-276 (325)
77 1mqb_A Ephrin type-A receptor 100.0 2.3E-37 7.8E-42 325.3 20.1 245 374-639 48-310 (333)
78 3niz_A Rhodanese family protei 100.0 7.6E-38 2.6E-42 325.7 16.0 249 374-631 25-300 (311)
79 3tki_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 326.6 16.9 239 374-632 11-262 (323)
80 2zv2_A Calcium/calmodulin-depe 100.0 4.4E-37 1.5E-41 317.8 21.4 242 374-631 17-292 (298)
81 3qd2_B Eukaryotic translation 100.0 6.8E-38 2.3E-42 328.4 15.6 238 374-631 10-325 (332)
82 4fvq_A Tyrosine-protein kinase 100.0 3.7E-38 1.3E-42 324.1 13.1 244 373-639 11-276 (289)
83 2h34_A Serine/threonine-protei 100.0 5.7E-37 1.9E-41 318.8 21.7 251 374-642 38-300 (309)
84 3brb_A Proto-oncogene tyrosine 100.0 4.8E-38 1.6E-42 327.3 13.5 252 374-642 38-312 (313)
85 2buj_A Serine/threonine-protei 100.0 2.6E-37 9.1E-42 322.2 19.1 252 374-645 33-313 (317)
86 3f66_A Hepatocyte growth facto 100.0 9.7E-38 3.3E-42 322.5 15.7 248 374-641 29-294 (298)
87 1o6l_A RAC-beta serine/threoni 100.0 3.4E-37 1.2E-41 324.0 20.1 237 374-631 9-260 (337)
88 3h4j_B AMPK kdaid, SNF1-like p 100.0 5E-38 1.7E-42 330.0 13.6 237 374-632 13-259 (336)
89 2x4f_A Myosin light chain kina 100.0 2.9E-37 9.9E-42 329.4 19.7 237 376-631 95-342 (373)
90 1u59_A Tyrosine-protein kinase 100.0 2.6E-37 8.9E-42 317.7 18.5 242 376-639 16-273 (287)
91 4e5w_A Tyrosine-protein kinase 100.0 9E-38 3.1E-42 323.3 14.9 249 374-638 25-302 (302)
92 3hko_A Calcium/calmodulin-depe 100.0 4E-37 1.4E-41 324.8 19.9 246 373-631 29-330 (345)
93 2bdw_A Hypothetical protein K1 100.0 3.6E-37 1.2E-41 327.4 19.5 243 372-632 31-285 (362)
94 3lzb_A Epidermal growth factor 100.0 4.8E-38 1.6E-42 329.6 12.5 244 374-639 19-279 (327)
95 3lxp_A Non-receptor tyrosine-p 100.0 4.3E-38 1.5E-42 328.6 12.1 248 374-639 35-311 (318)
96 1xbb_A Tyrosine-protein kinase 100.0 2.5E-37 8.4E-42 318.5 17.6 240 377-638 24-279 (291)
97 2i1m_A Macrophage colony-stimu 100.0 3.3E-38 1.1E-42 331.5 11.2 247 373-638 49-326 (333)
98 3gni_B Strad alpha; kinase fol 100.0 3.2E-37 1.1E-41 331.4 19.0 248 374-632 29-334 (389)
99 1csn_A Casein kinase-1; phosph 100.0 1.3E-37 4.5E-42 321.3 15.4 247 374-639 14-284 (298)
100 1ob3_A PFPK5, cell division co 100.0 1.5E-37 5.1E-42 319.7 15.6 247 374-631 6-280 (288)
101 3pls_A Macrophage-stimulating 100.0 1.7E-37 5.9E-42 320.4 15.9 251 375-644 26-293 (298)
102 1p4o_A Insulin-like growth fac 100.0 1.5E-37 5E-42 324.9 15.6 246 373-638 28-299 (322)
103 2w4o_A Calcium/calmodulin-depe 100.0 6.6E-37 2.3E-41 323.8 20.5 237 374-631 57-305 (349)
104 3soa_A Calcium/calmodulin-depe 100.0 6.7E-37 2.3E-41 333.3 21.1 241 373-631 14-267 (444)
105 2izr_A Casein kinase I isoform 100.0 1.5E-37 5E-42 326.3 15.1 245 374-638 13-281 (330)
106 4eut_A Serine/threonine-protei 100.0 3.5E-37 1.2E-41 331.8 18.3 260 374-639 13-310 (396)
107 1u5q_A Serine/threonine protei 100.0 5.7E-37 2E-41 324.0 19.2 241 374-633 58-307 (348)
108 3lxl_A Tyrosine-protein kinase 100.0 8.4E-38 2.9E-42 327.7 12.6 252 373-641 26-306 (327)
109 3g33_A Cell division protein k 100.0 4.5E-37 1.5E-41 319.2 17.7 254 373-631 12-296 (308)
110 1kob_A Twitchin; kinase, intra 100.0 1.2E-36 4.1E-41 325.7 21.2 239 374-631 55-304 (387)
111 3o0g_A Cell division protein k 100.0 5.6E-37 1.9E-41 316.0 17.9 248 374-631 6-282 (292)
112 1byg_A CSK, protein (C-termina 100.0 4.4E-38 1.5E-42 321.8 9.5 242 374-638 25-273 (278)
113 1fot_A TPK1 delta, CAMP-depend 100.0 8.1E-37 2.8E-41 318.7 18.9 237 374-631 10-258 (318)
114 3cc6_A Protein tyrosine kinase 100.0 1.3E-37 4.5E-42 318.8 12.8 243 374-638 16-273 (281)
115 3p1a_A MYT1 kinase, membrane-a 100.0 2E-37 7E-42 322.4 14.1 241 367-631 54-304 (311)
116 3mdy_A Bone morphogenetic prot 100.0 1.8E-36 6.3E-41 318.4 21.4 252 371-640 38-333 (337)
117 3ll6_A Cyclin G-associated kin 100.0 3.9E-37 1.3E-41 323.3 16.2 248 374-642 32-312 (337)
118 2jii_A Serine/threonine-protei 100.0 9.3E-38 3.2E-42 330.9 11.4 250 374-639 46-337 (352)
119 2pmi_A Negative RE, cyclin-dep 100.0 3E-37 1E-41 322.1 15.1 247 374-631 9-293 (317)
120 2w1i_A JAK2; chromosomal rearr 100.0 2.3E-37 8E-42 324.2 14.3 253 374-638 45-322 (326)
121 2a2a_A Death-associated protei 100.0 2.5E-36 8.7E-41 315.6 21.9 245 372-631 14-272 (321)
122 4fr4_A YANK1, serine/threonine 100.0 5.2E-37 1.8E-41 327.6 16.7 239 374-631 19-271 (384)
123 1fvr_A Tyrosine-protein kinase 100.0 5.6E-37 1.9E-41 321.4 16.5 248 374-641 29-303 (327)
124 3cok_A Serine/threonine-protei 100.0 6.4E-37 2.2E-41 313.1 16.5 238 374-631 15-262 (278)
125 2w5a_A Serine/threonine-protei 100.0 6.7E-37 2.3E-41 313.0 16.5 246 374-634 10-270 (279)
126 2eue_A Carbon catabolite derep 100.0 7.2E-37 2.5E-41 312.3 16.5 236 374-631 17-262 (275)
127 2v62_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 324.5 15.5 258 374-638 41-328 (345)
128 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.1E-36 3.9E-41 321.8 18.3 237 374-631 45-293 (350)
129 2y94_A 5'-AMP-activated protei 100.0 7.4E-37 2.5E-41 335.2 17.4 237 374-631 20-266 (476)
130 3uc3_A Serine/threonine-protei 100.0 1.9E-36 6.5E-41 321.8 20.0 238 374-632 24-275 (361)
131 3a62_A Ribosomal protein S6 ki 100.0 1.4E-36 4.8E-41 318.4 18.7 239 373-631 20-276 (327)
132 3fdn_A Serine/threonine-protei 100.0 9.9E-37 3.4E-41 311.9 17.1 238 374-632 13-258 (279)
133 2xir_A Vascular endothelial gr 100.0 6.9E-37 2.4E-41 318.7 16.1 248 374-639 31-311 (316)
134 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.4E-37 1.2E-41 326.1 13.9 232 374-626 27-269 (353)
135 3g2f_A Bone morphogenetic prot 100.0 1.8E-36 6E-41 318.7 19.2 253 374-640 17-320 (336)
136 3kn6_A Ribosomal protein S6 ki 100.0 8.8E-37 3E-41 319.7 16.8 235 376-631 17-270 (325)
137 3is5_A Calcium-dependent prote 100.0 2.2E-36 7.4E-41 310.6 19.3 240 373-631 25-278 (285)
138 3bhy_A Death-associated protei 100.0 2.8E-36 9.6E-41 309.0 20.1 252 372-638 7-274 (283)
139 2a19_B Interferon-induced, dou 100.0 5.8E-37 2E-41 314.0 14.6 241 373-641 14-277 (284)
140 3f3z_A Calcium/calmodulin-depe 100.0 3.6E-36 1.2E-40 307.3 20.3 246 373-639 12-271 (277)
141 4aw2_A Serine/threonine-protei 100.0 2E-37 7E-42 336.2 11.5 246 371-631 73-338 (437)
142 1nxk_A MAP kinase-activated pr 100.0 2E-36 6.9E-41 325.9 19.2 238 376-632 68-322 (400)
143 3v8s_A RHO-associated protein 100.0 3.1E-37 1E-41 332.3 12.7 239 376-632 75-330 (410)
144 2yex_A Serine/threonine-protei 100.0 4.8E-36 1.6E-40 306.0 20.8 238 374-631 11-261 (276)
145 1x8b_A WEE1HU, WEE1-like prote 100.0 7.9E-37 2.7E-41 313.4 14.8 236 374-631 15-279 (289)
146 2ac3_A MAP kinase-interacting 100.0 2.7E-36 9.3E-41 314.4 18.9 238 376-631 19-295 (316)
147 4dc2_A Protein kinase C IOTA t 100.0 1.4E-36 4.7E-41 325.5 17.1 234 374-626 56-307 (396)
148 3kk8_A Calcium/calmodulin depe 100.0 3.6E-36 1.2E-40 308.4 19.5 240 374-631 10-261 (284)
149 1t4h_A Serine/threonine-protei 100.0 5E-36 1.7E-40 308.5 20.7 242 374-631 30-282 (290)
150 3lm5_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 314.8 20.5 241 376-632 35-288 (327)
151 2rku_A Serine/threonine-protei 100.0 2.8E-36 9.5E-41 311.0 18.6 238 374-632 19-266 (294)
152 2yfx_A Tyrosine-protein kinase 100.0 1.5E-36 5.2E-41 318.1 16.9 247 373-639 33-305 (327)
153 2vgo_A Serine/threonine-protei 100.0 1.6E-36 5.4E-41 311.3 16.4 237 374-631 18-262 (284)
154 1xjd_A Protein kinase C, theta 100.0 7.3E-37 2.5E-41 322.4 14.1 236 374-630 21-268 (345)
155 4ejn_A RAC-alpha serine/threon 100.0 6.5E-37 2.2E-41 335.0 13.9 237 374-631 152-404 (446)
156 3a8x_A Protein kinase C IOTA t 100.0 4.4E-36 1.5E-40 316.7 19.7 234 374-626 13-264 (345)
157 1b6c_B TGF-B superfamily recep 100.0 5.8E-36 2E-40 315.4 20.6 252 368-639 40-337 (342)
158 4agu_A Cyclin-dependent kinase 100.0 2.5E-36 8.5E-41 314.0 17.4 247 374-631 7-284 (311)
159 2jam_A Calcium/calmodulin-depe 100.0 6.8E-36 2.3E-40 309.8 20.6 240 372-631 11-261 (304)
160 4hgt_A Casein kinase I isoform 100.0 2.9E-36 9.8E-41 310.8 17.6 248 373-639 12-281 (296)
161 3gxj_A TGF-beta receptor type- 100.0 5.2E-38 1.8E-42 325.0 4.6 246 374-639 7-298 (303)
162 3uzp_A CKI-delta, CKID, casein 100.0 3.9E-36 1.3E-40 310.0 18.2 245 374-640 13-282 (296)
163 1u46_A ACK-1, activated CDC42 100.0 7.7E-37 2.6E-41 314.4 12.7 247 374-639 22-285 (291)
164 3dbq_A Dual specificity protei 100.0 1.5E-36 5.3E-41 320.3 15.2 238 374-632 13-274 (343)
165 2owb_A Serine/threonine-protei 100.0 2.7E-36 9.2E-41 317.4 16.8 238 374-632 45-292 (335)
166 3dls_A PAS domain-containing s 100.0 1.1E-36 3.8E-41 320.2 13.7 234 374-632 28-275 (335)
167 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4E-36 1.4E-40 319.9 18.0 240 374-642 69-343 (365)
168 3llt_A Serine/threonine kinase 100.0 3E-36 1E-40 320.1 17.0 245 374-631 39-355 (360)
169 2r5t_A Serine/threonine-protei 100.0 2.6E-36 8.9E-41 321.5 16.4 239 374-633 42-291 (373)
170 3byv_A Rhoptry kinase; malaria 100.0 1.6E-37 5.4E-42 332.3 7.0 235 375-631 78-359 (377)
171 2r3i_A Cell division protein k 100.0 3.8E-36 1.3E-40 310.6 17.1 247 375-631 8-283 (299)
172 2i0e_A Protein kinase C-beta I 100.0 3.4E-36 1.2E-40 318.3 16.9 237 374-631 24-276 (353)
173 2zmd_A Dual specificity protei 100.0 7.2E-36 2.5E-40 320.6 19.6 238 374-632 60-321 (390)
174 2vd5_A DMPK protein; serine/th 100.0 5.3E-37 1.8E-41 330.6 10.8 240 376-631 67-327 (412)
175 2acx_A G protein-coupled recep 100.0 2.9E-36 1E-40 335.2 16.7 240 375-631 189-444 (576)
176 3q60_A ROP5B; pseudokinase, tr 100.0 1.1E-36 3.7E-41 325.0 12.8 247 374-631 66-352 (371)
177 2h6d_A 5'-AMP-activated protei 100.0 6.2E-36 2.1E-40 305.3 17.8 238 374-632 15-262 (276)
178 1ua2_A CAK, cell division prot 100.0 2.2E-36 7.5E-41 319.5 14.7 251 374-632 14-292 (346)
179 3oz6_A Mitogen-activated prote 100.0 2.3E-36 7.8E-41 324.6 15.0 248 374-632 13-329 (388)
180 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.8E-36 6.3E-41 317.8 13.9 246 374-631 38-318 (329)
181 2clq_A Mitogen-activated prote 100.0 4.9E-36 1.7E-40 309.1 16.5 237 376-631 28-278 (295)
182 2j0j_A Focal adhesion kinase 1 100.0 1.8E-36 6E-41 345.6 14.5 245 372-638 392-651 (656)
183 2j7t_A Serine/threonine-protei 100.0 8.5E-36 2.9E-40 308.5 18.1 238 374-631 23-275 (302)
184 3a7i_A MST3 kinase, serine/thr 100.0 9.6E-36 3.3E-40 308.4 18.4 237 374-633 26-272 (303)
185 2y7j_A Phosphorylase B kinase 100.0 2.8E-35 9.6E-40 313.3 22.3 242 375-631 99-359 (365)
186 3nyv_A Calmodulin-domain prote 100.0 1.1E-35 3.9E-40 328.6 20.0 242 372-631 28-281 (484)
187 3i6u_A CDS1, serine/threonine- 100.0 1.1E-35 3.9E-40 322.2 19.5 242 373-631 138-399 (419)
188 2pml_X PFPK7, Ser/Thr protein 100.0 6.5E-36 2.2E-40 315.9 17.0 252 374-631 35-322 (348)
189 3uqc_A Probable conserved tran 100.0 4.9E-36 1.7E-40 308.0 15.4 230 374-641 35-268 (286)
190 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.9E-36 9.8E-41 314.5 13.8 245 374-640 37-304 (319)
191 3mwu_A Calmodulin-domain prote 100.0 2.1E-35 7.1E-40 326.6 21.3 242 372-632 24-277 (486)
192 3mtl_A Cell division protein k 100.0 1.9E-36 6.7E-41 316.9 12.3 252 374-637 6-289 (324)
193 2wtk_C Serine/threonine-protei 100.0 1.9E-35 6.3E-40 306.4 19.5 242 374-632 9-264 (305)
194 3eqc_A Dual specificity mitoge 100.0 6.3E-36 2.2E-40 317.7 16.3 248 374-631 37-324 (360)
195 3ttj_A Mitogen-activated prote 100.0 7E-36 2.4E-40 327.7 17.0 247 374-632 66-356 (464)
196 4aaa_A Cyclin-dependent kinase 100.0 4.3E-36 1.5E-40 315.2 14.5 247 374-631 29-306 (331)
197 2vwi_A Serine/threonine-protei 100.0 1.6E-36 5.5E-41 313.8 10.8 245 374-631 19-287 (303)
198 3an0_A Dual specificity mitoge 100.0 9.5E-36 3.2E-40 313.8 16.7 238 375-631 56-310 (340)
199 3lij_A Calcium/calmodulin depe 100.0 2.1E-35 7.3E-40 327.1 20.3 241 372-631 39-291 (494)
200 2qr7_A Ribosomal protein S6 ki 100.0 6.9E-36 2.4E-40 314.9 15.3 237 373-631 25-277 (342)
201 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.5E-35 5.2E-40 328.6 18.6 234 376-626 191-438 (543)
202 3fme_A Dual specificity mitoge 100.0 9.2E-36 3.2E-40 306.2 15.7 240 374-631 11-266 (290)
203 3pg1_A Mitogen-activated prote 100.0 1.3E-35 4.5E-40 315.5 17.3 260 366-631 16-316 (362)
204 3sv0_A Casein kinase I-like; t 100.0 1.2E-35 4.2E-40 326.1 17.3 246 374-638 11-278 (483)
205 2x7f_A TRAF2 and NCK-interacti 100.0 1.9E-35 6.5E-40 309.4 17.9 239 374-631 28-286 (326)
206 1cm8_A Phosphorylated MAP kina 100.0 1.3E-35 4.3E-40 316.2 16.8 253 374-637 29-315 (367)
207 3com_A Serine/threonine-protei 100.0 2.3E-35 8E-40 307.0 18.3 236 374-631 33-278 (314)
208 2xrw_A Mitogen-activated prote 100.0 3.8E-35 1.3E-39 313.1 20.3 246 374-631 29-318 (371)
209 1blx_A Cyclin-dependent kinase 100.0 3E-35 1E-39 307.8 18.8 250 374-631 15-296 (326)
210 3mi9_A Cell division protein k 100.0 1.6E-35 5.5E-40 313.5 16.5 250 374-632 21-312 (351)
211 3nsz_A CK II alpha, casein kin 100.0 3.2E-35 1.1E-39 308.2 18.7 243 374-631 40-319 (330)
212 2wei_A Calmodulin-domain prote 100.0 9.5E-35 3.2E-39 298.6 21.6 242 371-631 23-276 (287)
213 1vzo_A Ribosomal protein S6 ki 100.0 6.8E-36 2.3E-40 316.9 13.2 241 374-632 58-322 (355)
214 2ycf_A Serine/threonine-protei 100.0 4.2E-35 1.5E-39 306.4 18.7 243 372-631 12-274 (322)
215 3rp9_A Mitogen-activated prote 100.0 1.9E-35 6.4E-40 324.6 16.4 183 374-564 57-280 (458)
216 3rgf_A Cyclin-dependent kinase 100.0 1.5E-35 5E-40 320.1 15.1 247 376-632 27-334 (405)
217 1phk_A Phosphorylase kinase; g 100.0 6.2E-35 2.1E-39 301.4 18.9 243 374-631 21-283 (298)
218 3q5i_A Protein kinase; CDPK, m 100.0 4.8E-35 1.6E-39 325.1 19.0 242 374-631 40-301 (504)
219 3n9x_A Phosphotransferase; mal 100.0 3.8E-35 1.3E-39 319.5 17.8 187 374-568 30-252 (432)
220 3kvw_A DYRK2, dual specificity 100.0 1.7E-35 5.8E-40 321.7 14.7 186 374-570 101-301 (429)
221 3m2w_A MAP kinase-activated pr 100.0 8.5E-35 2.9E-39 300.9 18.8 222 376-631 24-256 (299)
222 3eb0_A Putative uncharacterize 100.0 1.5E-35 5.2E-40 317.6 13.1 244 374-631 11-321 (383)
223 1j1b_A Glycogen synthase kinas 100.0 3.7E-35 1.3E-39 318.2 16.0 250 374-637 58-344 (420)
224 3pfq_A PKC-B, PKC-beta, protei 100.0 5E-35 1.7E-39 334.7 17.0 232 374-626 345-587 (674)
225 1zy4_A Serine/threonine-protei 100.0 2E-34 6.8E-39 297.8 19.7 238 374-631 10-283 (303)
226 2i6l_A Mitogen-activated prote 100.0 4.2E-35 1.4E-39 305.5 14.7 244 375-631 16-305 (320)
227 1z57_A Dual specificity protei 100.0 1.1E-34 3.7E-39 304.8 18.0 248 373-631 17-328 (339)
228 2b9h_A MAP kinase FUS3, mitoge 100.0 8.5E-35 2.9E-39 308.0 17.1 246 374-631 15-305 (353)
229 3cek_A Dual specificity protei 100.0 7.6E-35 2.6E-39 303.2 16.4 238 374-632 32-293 (313)
230 2fst_X Mitogen-activated prote 100.0 5.3E-35 1.8E-39 311.2 15.3 248 374-632 33-312 (367)
231 4exu_A Mitogen-activated prote 100.0 5.6E-35 1.9E-39 311.8 15.4 247 374-632 46-324 (371)
232 4e7w_A Glycogen synthase kinas 100.0 1.1E-34 3.7E-39 312.0 17.5 251 374-637 44-329 (394)
233 3coi_A Mitogen-activated prote 100.0 1.5E-34 5E-39 306.4 18.2 246 374-631 28-305 (353)
234 2vx3_A Dual specificity tyrosi 100.0 2E-34 6.8E-39 308.8 19.3 187 374-569 58-259 (382)
235 1wak_A Serine/threonine-protei 100.0 4.7E-35 1.6E-39 314.8 14.1 250 373-631 40-391 (397)
236 3aln_A Dual specificity mitoge 100.0 1.3E-34 4.6E-39 303.2 16.5 240 375-631 27-285 (327)
237 3fhr_A MAP kinase-activated pr 100.0 2E-34 6.7E-39 303.3 16.8 238 376-631 35-287 (336)
238 3e3p_A Protein kinase, putativ 100.0 1.5E-34 5.1E-39 307.0 15.8 254 375-639 28-324 (360)
239 3qyz_A Mitogen-activated prote 100.0 2.2E-34 7.5E-39 306.4 15.9 248 374-631 31-313 (364)
240 2dyl_A Dual specificity mitoge 100.0 4.4E-34 1.5E-38 297.7 17.8 239 375-631 30-283 (318)
241 2rio_A Serine/threonine-protei 100.0 3.1E-34 1.1E-38 312.4 16.3 235 376-631 21-295 (434)
242 2iwi_A Serine/threonine-protei 100.0 1.9E-35 6.4E-40 307.6 5.2 236 371-631 32-283 (312)
243 2eu9_A Dual specificity protei 100.0 9.3E-34 3.2E-38 299.8 17.9 248 373-631 22-333 (355)
244 1q8y_A SR protein kinase; tran 100.0 2.3E-34 7.9E-39 306.9 13.1 250 373-631 22-333 (373)
245 3a99_A Proto-oncogene serine/t 100.0 5E-35 1.7E-39 305.7 5.8 234 373-631 46-293 (320)
246 3p23_A Serine/threonine-protei 100.0 1.4E-33 4.8E-38 306.5 16.0 233 375-631 29-283 (432)
247 3qa8_A MGC80376 protein; kinas 100.0 7.4E-34 2.5E-38 319.0 12.1 260 373-639 17-310 (676)
248 2pzi_A Probable serine/threoni 100.0 3.9E-33 1.3E-37 320.8 14.4 234 373-637 83-327 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 2.8E-33 9.4E-38 302.8 9.8 234 375-630 83-362 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.4E-32 8.1E-37 287.3 7.8 238 372-630 22-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 1.2E-25 4.2E-30 251.6 10.6 183 376-568 240-438 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 1.4E-24 4.7E-29 225.7 13.8 157 26-187 2-167 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.5E-23 5E-28 233.5 8.7 176 376-568 342-538 (540)
254 3rgz_A Protein brassinosteroid 99.9 1E-22 3.5E-27 237.4 11.9 158 24-186 6-195 (768)
255 4eco_A Uncharacterized protein 99.9 9.4E-22 3.2E-26 224.2 13.7 155 29-187 29-293 (636)
256 4ecn_A Leucine-rich repeat pro 99.8 1.5E-21 5E-26 227.4 12.6 154 28-187 267-535 (876)
257 1zar_A RIO2 kinase; serine kin 99.8 1.7E-20 5.8E-25 191.5 10.6 135 375-527 95-242 (282)
258 4fcg_A Uncharacterized protein 99.8 2.1E-20 7.3E-25 195.3 5.1 157 27-187 24-200 (328)
259 1zth_A RIO1 serine protein kin 99.7 2.8E-18 9.4E-23 172.8 10.1 139 374-527 51-219 (258)
260 3e6j_A Variable lymphocyte rec 99.7 1.7E-16 5.9E-21 156.7 13.1 128 58-186 14-152 (229)
261 1w8a_A SLIT protein; signaling 99.7 2.3E-16 7.9E-21 151.3 11.5 125 63-187 8-144 (192)
262 3rgz_A Protein brassinosteroid 99.6 6.2E-16 2.1E-20 180.1 10.5 115 73-187 490-674 (768)
263 2v70_A SLIT-2, SLIT homolog 2 99.6 1.9E-15 6.4E-20 148.2 12.3 125 63-187 11-147 (220)
264 2o6r_A Variable lymphocyte rec 99.6 1.8E-15 6.1E-20 142.9 11.5 125 63-187 7-142 (177)
265 2v9t_B SLIT homolog 2 protein 99.6 2.7E-15 9.2E-20 147.1 12.6 125 63-187 11-146 (220)
266 2o6s_A Variable lymphocyte rec 99.6 4.6E-15 1.6E-19 144.0 13.0 126 62-187 6-142 (208)
267 3m19_A Variable lymphocyte rec 99.6 7.7E-15 2.6E-19 146.9 13.4 113 74-186 36-148 (251)
268 4gyi_A RIO2 kinase; protein ki 99.6 2.5E-15 8.5E-20 157.6 9.7 139 374-526 99-264 (397)
269 1ogq_A PGIP-2, polygalacturona 99.6 2.9E-15 9.9E-20 155.2 7.5 115 73-187 76-192 (313)
270 2wfh_A SLIT homolog 2 protein 99.5 1.8E-14 6.3E-19 138.1 11.7 122 63-185 10-142 (193)
271 2v70_A SLIT-2, SLIT homolog 2 99.5 2.9E-14 9.9E-19 139.7 10.4 114 73-186 57-170 (220)
272 2o6q_A Variable lymphocyte rec 99.5 5.5E-14 1.9E-18 142.3 12.7 121 60-183 2-123 (270)
273 4b8c_D Glucose-repressible alc 99.5 8E-15 2.7E-19 168.9 6.6 154 28-187 130-310 (727)
274 4fcg_A Uncharacterized protein 99.5 2.6E-14 8.9E-19 149.0 9.2 113 73-187 150-271 (328)
275 2je0_A Acidic leucine-rich nuc 99.5 2.9E-14 9.8E-19 130.5 7.7 112 73-186 17-130 (149)
276 3v47_A TOLL-like receptor 5B a 99.5 5.9E-14 2E-18 153.1 9.8 129 59-187 4-147 (455)
277 1w8a_A SLIT protein; signaling 99.5 1.7E-13 5.8E-18 131.2 11.4 109 76-187 11-120 (192)
278 2z81_A CD282 antigen, TOLL-lik 99.5 5.6E-14 1.9E-18 157.1 9.2 125 62-187 3-141 (549)
279 3m19_A Variable lymphocyte rec 99.5 2.3E-13 8E-18 136.1 12.4 115 73-187 59-173 (251)
280 4g8a_A TOLL-like receptor 4; l 99.4 2.2E-13 7.6E-18 154.6 12.2 114 74-187 53-167 (635)
281 2ell_A Acidic leucine-rich nuc 99.4 1.7E-13 5.8E-18 128.1 9.1 112 73-186 24-137 (168)
282 3g39_A Variable lymphocyte rec 99.4 3.9E-13 1.3E-17 126.0 11.5 108 77-187 13-120 (170)
283 2v9t_B SLIT homolog 2 protein 99.4 3.2E-13 1.1E-17 132.2 10.8 112 73-184 56-167 (220)
284 1dce_A Protein (RAB geranylger 99.4 2.1E-13 7.3E-18 152.4 9.9 109 74-187 442-551 (567)
285 2r9u_A Variable lymphocyte rec 99.4 5.3E-13 1.8E-17 125.5 11.1 108 76-186 15-122 (174)
286 3rfs_A Internalin B, repeat mo 99.4 7.3E-13 2.5E-17 134.1 12.4 112 73-186 63-174 (272)
287 2o6s_A Variable lymphocyte rec 99.4 6.3E-13 2.2E-17 128.8 11.4 115 73-187 52-166 (208)
288 3rfs_A Internalin B, repeat mo 99.4 6.1E-13 2.1E-17 134.7 11.6 115 73-187 85-199 (272)
289 4eco_A Uncharacterized protein 99.4 1E-13 3.4E-18 157.8 6.3 125 62-188 192-349 (636)
290 3vq2_A TLR4, TOLL-like recepto 99.4 5.9E-13 2E-17 150.7 12.4 128 60-187 4-147 (606)
291 3e6j_A Variable lymphocyte rec 99.4 7.9E-13 2.7E-17 130.3 11.5 114 73-187 64-177 (229)
292 2z62_A TOLL-like receptor 4, v 99.4 1.1E-12 3.8E-17 133.0 12.5 114 74-187 29-143 (276)
293 2xot_A Amphoterin-induced prot 99.4 7.4E-13 2.5E-17 139.9 11.1 122 63-184 18-151 (361)
294 2wfh_A SLIT homolog 2 protein 99.4 1.3E-12 4.6E-17 125.0 11.2 107 76-186 13-119 (193)
295 2ifg_A High affinity nerve gro 99.4 1E-12 3.4E-17 138.0 11.2 109 63-184 8-118 (347)
296 3oja_B Anopheles plasmodium-re 99.4 1.4E-12 4.8E-17 147.3 12.1 136 49-187 8-165 (597)
297 2z80_A TOLL-like receptor 2, v 99.4 1E-12 3.5E-17 138.3 9.3 125 59-186 26-166 (353)
298 2id5_A Lingo-1, leucine rich r 99.3 2.7E-12 9.4E-17 140.8 12.6 124 64-187 12-146 (477)
299 1ozn_A Reticulon 4 receptor; N 99.3 3.4E-12 1.2E-16 130.0 12.1 114 74-187 33-147 (285)
300 3v47_A TOLL-like receptor 5B a 99.3 1.9E-12 6.5E-17 141.0 10.7 114 73-186 275-388 (455)
301 2z66_A Variable lymphocyte rec 99.3 2.5E-12 8.5E-17 132.5 10.9 114 73-186 101-216 (306)
302 3oja_A Leucine-rich immune mol 99.3 1.3E-12 4.5E-17 143.7 9.2 30 415-444 323-352 (487)
303 1p9a_G Platelet glycoprotein I 99.3 3.6E-12 1.2E-16 130.3 11.9 108 73-183 55-162 (290)
304 4ecn_A Leucine-rich repeat pro 99.3 5.4E-13 1.9E-17 155.4 6.1 124 63-188 435-591 (876)
305 1ozn_A Reticulon 4 receptor; N 99.3 3.7E-12 1.2E-16 129.8 10.8 115 73-187 80-195 (285)
306 3cvr_A Invasion plasmid antige 99.3 1.7E-12 5.8E-17 144.5 8.5 118 51-187 34-157 (571)
307 2o6q_A Variable lymphocyte rec 99.3 7.5E-12 2.6E-16 126.5 12.5 115 73-187 61-175 (270)
308 2z62_A TOLL-like receptor 4, v 99.3 4.4E-12 1.5E-16 128.6 10.7 115 73-187 52-167 (276)
309 3j0a_A TOLL-like receptor 5; m 99.3 2.4E-12 8.2E-17 151.4 9.9 124 63-186 14-140 (844)
310 4ezg_A Putative uncharacterize 99.3 4.3E-12 1.5E-16 121.9 9.9 111 73-187 44-154 (197)
311 3zyi_A Leucine-rich repeat-con 99.3 8.8E-12 3E-16 135.8 13.6 123 65-187 56-189 (452)
312 3zyj_A Leucine-rich repeat-con 99.3 8.8E-12 3E-16 135.3 13.1 123 65-187 45-178 (440)
313 3t6q_A CD180 antigen; protein- 99.3 5.2E-12 1.8E-16 142.9 11.6 125 65-189 14-150 (606)
314 2z66_A Variable lymphocyte rec 99.3 5E-12 1.7E-16 130.2 10.2 115 73-187 126-241 (306)
315 2xwt_C Thyrotropin receptor; s 99.3 4.9E-12 1.7E-16 125.3 9.7 112 73-186 31-148 (239)
316 4ezg_A Putative uncharacterize 99.3 4.2E-12 1.4E-16 121.9 8.8 108 73-183 66-173 (197)
317 3vq2_A TLR4, TOLL-like recepto 99.3 5.7E-12 1.9E-16 142.6 11.4 115 73-187 56-171 (606)
318 1wwl_A Monocyte differentiatio 99.3 1.3E-12 4.4E-17 135.1 5.3 111 74-185 64-189 (312)
319 1p9a_G Platelet glycoprotein I 99.3 1.4E-11 4.7E-16 126.0 12.8 112 73-187 31-142 (290)
320 2o6r_A Variable lymphocyte rec 99.3 1.7E-11 5.8E-16 115.4 12.4 109 75-186 9-117 (177)
321 1ziw_A TOLL-like receptor 3; i 99.3 6E-12 2E-16 144.5 11.1 115 73-187 25-139 (680)
322 3g39_A Variable lymphocyte rec 99.3 7.1E-12 2.4E-16 117.3 9.1 100 63-162 9-119 (170)
323 2ft3_A Biglycan; proteoglycan, 99.3 1.4E-11 4.9E-16 128.4 12.0 118 63-183 33-161 (332)
324 2z63_A TOLL-like receptor 4, v 99.3 7.5E-12 2.6E-16 140.3 10.5 115 73-187 396-512 (570)
325 3o6n_A APL1; leucine-rich repe 99.3 1.2E-11 4.1E-16 132.0 11.2 112 74-187 46-159 (390)
326 2xot_A Amphoterin-induced prot 99.3 1.1E-11 3.6E-16 131.0 10.5 112 73-185 64-179 (361)
327 2je0_A Acidic leucine-rich nuc 99.3 2.2E-12 7.7E-17 117.8 4.6 104 73-178 42-149 (149)
328 2ell_A Acidic leucine-rich nuc 99.3 4.4E-12 1.5E-16 118.4 6.6 109 73-183 49-161 (168)
329 4g8a_A TOLL-like receptor 4; l 99.3 8.9E-12 3E-16 141.3 10.5 114 74-187 77-191 (635)
330 1xku_A Decorin; proteoglycan, 99.3 1.9E-11 6.5E-16 127.2 11.8 119 62-183 30-159 (330)
331 3oja_B Anopheles plasmodium-re 99.2 1.3E-11 4.6E-16 139.3 11.1 112 73-184 75-186 (597)
332 1wwl_A Monocyte differentiatio 99.2 1.3E-12 4.6E-17 135.0 2.5 110 73-183 95-215 (312)
333 2z7x_B TOLL-like receptor 1, v 99.2 6.2E-12 2.1E-16 139.5 7.8 108 73-183 21-129 (520)
334 2z63_A TOLL-like receptor 4, v 99.2 3E-11 1E-15 135.5 12.6 115 73-187 28-143 (570)
335 1a9n_A U2A', U2A'; complex (nu 99.2 1.9E-11 6.5E-16 115.0 9.3 109 73-187 19-130 (176)
336 3a79_B TLR6, VLRB.59, TOLL-lik 99.2 1.8E-11 6.2E-16 137.2 10.0 108 73-183 52-160 (562)
337 3j0a_A TOLL-like receptor 5; m 99.2 2.1E-11 7.3E-16 143.3 10.1 115 73-187 48-166 (844)
338 3oja_A Leucine-rich immune mol 99.2 2.2E-11 7.6E-16 133.8 9.4 122 62-187 108-231 (487)
339 2z81_A CD282 antigen, TOLL-lik 99.2 9.5E-12 3.2E-16 138.9 6.1 115 73-187 50-166 (549)
340 3a79_B TLR6, VLRB.59, TOLL-lik 99.2 2.3E-11 8E-16 136.3 9.2 94 94-187 350-446 (562)
341 2z7x_B TOLL-like receptor 1, v 99.2 2.6E-11 8.8E-16 134.5 9.0 112 74-187 303-417 (520)
342 3o6n_A APL1; leucine-rich repe 99.2 5.3E-11 1.8E-15 127.0 11.1 111 73-184 69-180 (390)
343 2id5_A Lingo-1, leucine rich r 99.2 3.3E-11 1.1E-15 132.2 9.7 114 73-186 56-169 (477)
344 4glp_A Monocyte differentiatio 99.2 1.2E-11 4E-16 127.8 5.3 114 74-187 118-242 (310)
345 1ziw_A TOLL-like receptor 3; i 99.2 3.7E-11 1.3E-15 137.8 10.0 115 73-187 49-163 (680)
346 3t6q_A CD180 antigen; protein- 99.2 4.8E-11 1.7E-15 134.9 10.6 115 73-187 400-518 (606)
347 1a9n_A U2A', U2A'; complex (nu 99.2 1.7E-11 5.8E-16 115.3 5.2 107 74-184 43-155 (176)
348 4glp_A Monocyte differentiatio 99.2 2.4E-11 8.1E-16 125.4 6.6 109 74-182 92-210 (310)
349 2xwt_C Thyrotropin receptor; s 99.1 4.3E-11 1.5E-15 118.5 7.8 112 73-187 55-173 (239)
350 4b8c_D Glucose-repressible alc 99.1 4.8E-11 1.6E-15 137.4 8.5 111 73-187 224-334 (727)
351 3zyj_A Leucine-rich repeat-con 99.1 2.1E-10 7.3E-15 124.4 12.7 114 73-187 88-202 (440)
352 1xku_A Decorin; proteoglycan, 99.1 1.4E-10 4.9E-15 120.6 10.7 111 73-187 145-257 (330)
353 3o53_A Protein LRIM1, AGAP0063 99.1 1.1E-10 3.8E-15 120.8 9.5 107 74-183 121-228 (317)
354 2r9u_A Variable lymphocyte rec 99.1 1.4E-10 4.9E-15 108.8 9.3 98 63-160 12-120 (174)
355 1dce_A Protein (RAB geranylger 99.1 9E-11 3.1E-15 131.1 9.0 101 73-176 463-567 (567)
356 3zyi_A Leucine-rich repeat-con 99.1 1.2E-10 4.3E-15 126.7 9.7 113 73-187 171-284 (452)
357 1ds9_A Outer arm dynein; leuci 99.1 9.3E-13 3.2E-17 126.6 -6.4 110 73-187 48-158 (198)
358 2z80_A TOLL-like receptor 2, v 99.1 5.6E-11 1.9E-15 125.0 6.4 114 73-187 76-192 (353)
359 2ft3_A Biglycan; proteoglycan, 99.1 7.2E-11 2.5E-15 123.0 7.1 110 73-187 147-258 (332)
360 3o53_A Protein LRIM1, AGAP0063 99.1 1.5E-10 5.2E-15 119.7 9.4 111 73-187 144-256 (317)
361 3cvr_A Invasion plasmid antige 99.1 1.4E-10 4.8E-15 129.1 8.4 97 74-187 121-224 (571)
362 1h6t_A Internalin B; cell adhe 99.1 3.2E-10 1.1E-14 115.8 10.4 106 73-186 68-173 (291)
363 1ds9_A Outer arm dynein; leuci 99.1 1.9E-12 6.3E-17 124.5 -6.1 106 73-183 18-129 (198)
364 3tm0_A Aminoglycoside 3'-phosp 99.1 3.8E-10 1.3E-14 113.2 10.4 136 375-525 19-212 (263)
365 1h6t_A Internalin B; cell adhe 99.0 4.5E-10 1.5E-14 114.7 10.3 103 73-183 90-192 (291)
366 1xeu_A Internalin C; cellular 99.0 6.1E-10 2.1E-14 111.9 10.7 101 74-183 42-142 (263)
367 1xeu_A Internalin C; cellular 99.0 5.6E-10 1.9E-14 112.2 10.2 103 73-184 63-165 (263)
368 1m9s_A Internalin B; cell inva 99.0 5.1E-10 1.7E-14 125.8 10.8 106 73-186 65-170 (605)
369 3bz5_A Internalin-J, INLJ; leu 99.0 6.1E-10 2.1E-14 121.3 10.8 100 73-183 42-141 (457)
370 1h6u_A Internalin H; cell adhe 99.0 5E-10 1.7E-14 115.3 9.5 106 73-186 85-190 (308)
371 1m9s_A Internalin B; cell inva 99.0 6.7E-10 2.3E-14 124.8 11.0 107 72-187 86-192 (605)
372 3g06_A SSPH2 (leucine-rich rep 99.0 1.5E-10 5.2E-15 130.3 4.8 111 58-183 17-135 (622)
373 2ast_B S-phase kinase-associat 99.0 6.3E-11 2.1E-15 123.5 1.4 111 73-184 70-184 (336)
374 2ast_B S-phase kinase-associat 99.0 1.4E-10 4.8E-15 120.8 3.5 117 63-183 37-157 (336)
375 1nd4_A Aminoglycoside 3'-phosp 99.0 1.8E-09 6.2E-14 107.8 11.5 130 377-526 26-214 (264)
376 1h6u_A Internalin H; cell adhe 99.0 1.1E-09 3.8E-14 112.7 10.2 106 73-186 63-168 (308)
377 3bz5_A Internalin-J, INLJ; leu 99.0 8.4E-10 2.9E-14 120.2 9.5 106 73-187 170-282 (457)
378 4fmz_A Internalin; leucine ric 99.0 1E-09 3.5E-14 114.8 9.8 104 74-185 200-303 (347)
379 2ca6_A RAN GTPase-activating p 99.0 1E-10 3.4E-15 124.6 2.0 115 73-187 159-296 (386)
380 4fmz_A Internalin; leucine ric 99.0 7.6E-10 2.6E-14 115.8 8.0 108 73-186 221-328 (347)
381 1jl5_A Outer protein YOPM; leu 99.0 2.3E-09 7.9E-14 116.6 12.0 79 97-183 131-209 (454)
382 1o6v_A Internalin A; bacterial 99.0 1.2E-09 4.2E-14 119.3 9.8 104 73-184 243-346 (466)
383 3dxp_A Putative acyl-COA dehyd 98.9 3.2E-09 1.1E-13 111.8 11.9 143 376-527 44-249 (359)
384 1jl5_A Outer protein YOPM; leu 98.9 9.9E-10 3.4E-14 119.5 7.5 103 73-187 257-377 (454)
385 1o6v_A Internalin A; bacterial 98.9 1.5E-09 5.2E-14 118.5 8.6 106 73-186 265-370 (466)
386 3g06_A SSPH2 (leucine-rich rep 98.9 2E-09 6.9E-14 121.1 9.6 58 121-187 221-278 (622)
387 2ca6_A RAN GTPase-activating p 98.9 2.8E-10 9.4E-15 121.2 2.3 113 72-184 121-259 (386)
388 4ay9_X Follicle-stimulating ho 98.9 2E-09 7E-14 112.9 8.4 116 63-179 9-138 (350)
389 2ifg_A High affinity nerve gro 98.9 2.5E-09 8.4E-14 112.0 8.6 86 100-187 11-98 (347)
390 3goz_A Leucine-rich repeat-con 98.8 9.6E-10 3.3E-14 116.0 3.1 110 74-183 23-152 (362)
391 3rw6_A Nuclear RNA export fact 98.8 2.2E-10 7.6E-15 114.3 -1.8 125 61-187 76-238 (267)
392 3goz_A Leucine-rich repeat-con 98.8 1.4E-09 4.7E-14 114.7 2.6 105 79-183 4-123 (362)
393 4ay9_X Follicle-stimulating ho 98.7 3.4E-08 1.2E-12 103.5 8.9 107 77-186 13-121 (350)
394 3sg8_A APH(2'')-ID; antibiotic 98.6 3.9E-08 1.3E-12 100.9 6.7 178 376-568 26-287 (304)
395 1z7x_W Ribonuclease inhibitor; 98.6 4.4E-09 1.5E-13 114.4 -1.2 115 73-187 256-392 (461)
396 1z7x_W Ribonuclease inhibitor; 98.5 4.1E-09 1.4E-13 114.7 -2.8 114 73-186 227-358 (461)
397 3rw6_A Nuclear RNA export fact 98.5 3.1E-08 1.1E-12 98.8 2.0 81 94-176 167-258 (267)
398 3un9_A NLR family member X1; l 98.5 3.1E-08 1.1E-12 104.6 1.8 112 73-184 101-226 (372)
399 3r70_A Aminoglycoside phosphot 98.4 1.5E-06 5E-11 89.8 13.2 130 376-526 43-237 (320)
400 3d1u_A Putative fructosamine-3 98.4 6.3E-07 2.2E-11 90.9 10.0 137 376-525 21-215 (288)
401 3un9_A NLR family member X1; l 98.3 7.9E-08 2.7E-12 101.4 0.4 111 73-183 72-197 (372)
402 4gkh_A Aminoglycoside 3'-phosp 98.2 1.1E-05 3.7E-10 80.8 12.8 135 376-526 30-223 (272)
403 3tdw_A Gentamicin resistance p 98.2 1.2E-05 4.2E-10 82.2 13.3 135 376-526 25-224 (306)
404 1io0_A Tropomodulin; LRR prote 98.2 3.1E-07 1.1E-11 86.8 1.0 111 72-182 35-164 (185)
405 3ogk_B Coronatine-insensitive 98.2 2E-07 6.9E-12 104.7 -0.4 112 73-184 378-503 (592)
406 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.4E-05 4.7E-10 83.9 10.7 139 376-526 47-243 (362)
407 3ogk_B Coronatine-insensitive 98.0 8.8E-07 3E-11 99.4 1.1 104 74-178 139-252 (592)
408 3ats_A Putative uncharacterize 98.0 2.8E-05 9.5E-10 81.3 11.0 85 376-462 26-122 (357)
409 2p1m_B Transport inhibitor res 97.7 2.7E-06 9.1E-11 95.5 -1.6 111 73-184 372-496 (594)
410 3sb4_A Hypothetical leucine ri 97.7 8.5E-05 2.9E-09 76.7 9.1 85 96-182 225-310 (329)
411 1io0_A Tropomodulin; LRR prote 97.7 1.1E-05 3.6E-10 76.1 1.7 97 88-184 27-138 (185)
412 2olc_A MTR kinase, methylthior 97.6 0.00013 4.5E-09 77.3 9.9 78 376-458 36-120 (397)
413 2ra8_A Uncharacterized protein 97.6 1.5E-05 5.1E-10 83.4 2.4 109 73-184 172-294 (362)
414 2p1m_B Transport inhibitor res 97.6 8.8E-06 3E-10 91.2 -0.2 107 73-179 105-221 (594)
415 2q83_A YTAA protein; 2635576, 97.6 0.00027 9.2E-09 73.0 10.7 31 495-525 221-251 (346)
416 3f7w_A Putative fructosamine-3 97.5 0.00023 7.9E-09 71.9 9.7 74 376-460 21-97 (288)
417 3jr1_A Putative fructosamine-3 97.4 0.0019 6.5E-08 65.8 14.7 135 376-522 42-232 (312)
418 2ra8_A Uncharacterized protein 97.2 0.00012 4.1E-09 76.5 2.9 110 73-185 139-268 (362)
419 3sb4_A Hypothetical leucine ri 97.2 0.00051 1.7E-08 70.7 7.2 100 74-175 227-327 (329)
420 3dxq_A Choline/ethanolamine ki 97.0 0.002 6.8E-08 65.3 9.2 70 376-460 24-95 (301)
421 2pyw_A Uncharacterized protein 96.7 0.0035 1.2E-07 66.8 8.5 70 495-565 231-313 (420)
422 3csv_A Aminoglycoside phosphot 96.6 0.0055 1.9E-07 63.0 9.5 33 495-527 182-218 (333)
423 2ppq_A HSK, HK, homoserine kin 96.4 0.011 3.7E-07 60.3 10.3 140 376-525 28-216 (322)
424 3e4g_A ATP synthase subunit S, 96.3 0.0016 5.4E-08 60.1 2.6 82 98-179 62-149 (176)
425 1nw1_A Choline kinase (49.2 KD 96.2 0.013 4.4E-07 62.6 9.7 72 376-460 79-159 (429)
426 2qg7_A Ethanolamine kinase PV0 96.2 0.028 9.4E-07 60.4 12.1 73 376-460 114-188 (458)
427 4fdw_A Leucine rich hypothetic 96.1 0.011 3.6E-07 62.7 8.3 100 74-179 227-333 (401)
428 3rfe_A Platelet glycoprotein I 96.0 0.0087 3E-07 52.3 6.0 14 168-181 54-67 (130)
429 3feg_A Choline/ethanolamine ki 96.0 0.021 7.1E-07 59.7 9.9 139 376-526 56-254 (379)
430 3e4g_A ATP synthase subunit S, 96.0 0.0027 9.3E-08 58.5 2.6 84 73-156 61-150 (176)
431 1zyl_A Hypothetical protein YI 96.0 0.026 9E-07 57.5 10.3 138 377-525 33-222 (328)
432 3rfe_A Platelet glycoprotein I 95.8 0.012 4.1E-07 51.4 5.9 57 100-158 11-68 (130)
433 3c5i_A Choline kinase; choline 95.8 0.017 5.8E-07 60.2 7.9 73 376-460 39-121 (369)
434 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0033 1.1E-07 59.1 1.3 111 72-182 40-170 (197)
435 4fdw_A Leucine rich hypothetic 95.2 0.044 1.5E-06 57.9 8.5 106 74-183 249-359 (401)
436 3i1a_A Spectinomycin phosphotr 94.3 0.21 7.1E-06 51.2 11.0 31 496-526 206-236 (339)
437 1pgv_A TMD-1, tropomodulin TMD 93.9 0.022 7.5E-07 53.4 2.3 91 89-179 33-136 (197)
438 3f2s_A CK, chetk-alpha, cholin 92.0 0.42 1.4E-05 50.1 8.9 144 376-525 58-279 (401)
439 3g15_A CK, chetk-alpha, cholin 90.9 0.74 2.5E-05 48.3 9.6 29 498-526 246-280 (401)
440 4gt6_A Cell surface protein; l 90.2 0.51 1.7E-05 49.3 7.6 101 74-181 266-369 (394)
441 4h09_A Hypothetical leucine ri 89.9 0.85 2.9E-05 47.1 9.0 102 74-179 218-320 (379)
442 2yle_A Protein spire homolog 1 89.8 0.64 2.2E-05 43.9 7.0 97 459-563 34-131 (229)
443 3mes_A Choline kinase; malaria 89.1 1.1 3.9E-05 47.2 9.2 73 376-460 76-157 (424)
444 4gt6_A Cell surface protein; l 88.1 1.2 4E-05 46.5 8.5 83 92-179 260-344 (394)
445 4fs7_A Uncharacterized protein 87.5 0.82 2.8E-05 47.7 6.9 81 92-179 271-353 (394)
446 4fs7_A Uncharacterized protein 87.3 0.82 2.8E-05 47.7 6.7 83 92-179 292-376 (394)
447 3cxl_A N-chimerin; SH2, RHO-GA 85.2 0.1 3.5E-06 56.0 -1.7 63 374-442 146-215 (463)
448 2l2t_A Receptor tyrosine-prote 84.0 0.29 9.9E-06 33.2 0.7 27 311-337 11-39 (44)
449 4h09_A Hypothetical leucine ri 82.2 3.3 0.00011 42.5 8.5 87 92-182 212-299 (379)
450 2ks1_B Epidermal growth factor 80.2 0.59 2E-05 31.8 1.1 13 311-323 12-24 (44)
451 4ann_A ESSB; membrane protein, 73.4 9.9 0.00034 35.7 7.9 116 429-569 43-158 (215)
452 2jwa_A Receptor tyrosine-prote 64.8 1.3 4.4E-05 30.0 -0.1 7 312-318 14-20 (44)
453 4ano_A ESSB; membrane protein, 61.5 21 0.0007 33.6 7.5 81 471-568 81-162 (219)
454 2k9y_A Ephrin type-A receptor 45.8 7.6 0.00026 25.7 1.2 13 312-324 15-27 (41)
455 2fq3_A Transcription regulator 34.1 50 0.0017 26.9 4.6 45 589-633 33-77 (104)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.7e-53 Score=440.08 Aligned_cols=254 Identities=22% Similarity=0.372 Sum_probs=207.3
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEEEC------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEE
Q 006019 365 SELEAACEDFSNVIGSSPIGTVYKGTLS------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIG 438 (664)
Q Consensus 365 ~el~~~~~~~~~~iG~G~~G~Vy~g~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g 438 (664)
.|+...+..|.+.||+|+||+||+|++. +++.||||++..... ....++|.+|+.+|++++|||||+++|
T Consensus 21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~----~~~~~~f~~E~~il~~l~HpNIV~l~g 96 (308)
T 4gt4_A 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE----GPLREEFRHEAMLRARLQHPNVVCLLG 96 (308)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC----C-CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC----hHHHHHHHHHHHHHHhCCCCCCCCcce
Confidence 3444445567789999999999999973 467899999864432 234578999999999999999999999
Q ss_pred EEecCCCceeEEEEEecCCCChhhhhcccC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcC
Q 006019 439 FCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLN 504 (664)
Q Consensus 439 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk 504 (664)
+|.+.+ ..+||||||++|+|.++|+... ...++|..+++|+.|||+||+|||+.+ |||||||
T Consensus 97 ~~~~~~--~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLK 172 (308)
T 4gt4_A 97 VVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLA 172 (308)
T ss_dssp EECSSS--SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCS
T ss_pred EEEECC--EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCcc
Confidence 999877 5699999999999999996432 246999999999999999999999998 9999999
Q ss_pred CCCeEecCCCceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCC
Q 006019 505 SSAVHLTEDYAAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDN 572 (664)
Q Consensus 505 ~~NILld~~~~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~ 572 (664)
|+|||||+++.+||+|||+++..... +..+.+||......++.|+|||||||++|||+| |+.||. +
T Consensus 173 ~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~--~ 250 (308)
T 4gt4_A 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC--G 250 (308)
T ss_dssp GGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT--T
T ss_pred ccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCC--C
Confidence 99999999999999999999876322 234678888888889999999999999999999 899994 3
Q ss_pred CChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 573 GSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
....+....+..+. ....+++++.++.+++.+||+.||++||||.||++.|+.+.+
T Consensus 251 ~~~~~~~~~i~~~~----------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 251 YSNQDVVEMIRNRQ----------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp CCHHHHHHHHHTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHcCC----------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 33444444433321 112344556779999999999999999999999999998654
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.9e-52 Score=429.06 Aligned_cols=248 Identities=21% Similarity=0.363 Sum_probs=205.5
Q ss_pred hhcccccCCCeEEEEEEEC------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 374 FSNVIGSSPIGTVYKGTLS------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
+.+.||+|+||.||+|++. ++..||||+++.. .....++|.+|+++|++++|||||+++|+|.+.+ .
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~ 89 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--P 89 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--S
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC--E
Confidence 5588999999999999974 4788999998632 2345678999999999999999999999999877 6
Q ss_pred eEEEEEecCCCChhhhhccc-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCce
Q 006019 448 RMMVFEYAPNGTLFEHIHIK-----------ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAA 516 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~-----------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~ 516 (664)
.+||||||++|+|.++|+.. ....++|.++++|+.|||.||+|||+++ ||||||||+|||||+++.+
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCE
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCccCHhhEEECCCCcE
Confidence 79999999999999999642 2457999999999999999999999988 9999999999999999999
Q ss_pred EecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhc
Q 006019 517 KLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLS 584 (664)
Q Consensus 517 kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~ 584 (664)
||+|||+++..... +..+.+||......++.|+|||||||++|||+| |+.||. +....+.......
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~--~~~~~~~~~~i~~ 245 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY--QLSNNEVIECITQ 245 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT--TSCHHHHHHHHHH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHc
Confidence 99999999876322 234678888888889999999999999999999 999994 3344444444443
Q ss_pred CCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCC
Q 006019 585 GVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 642 (664)
Q Consensus 585 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 642 (664)
+. ....+..++.++.+++.+||+.||++||||++|++.|+++.+.+|.
T Consensus 246 ~~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~ 293 (299)
T 4asz_A 246 GR----------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293 (299)
T ss_dssp TC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCC
T ss_pred CC----------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCc
Confidence 31 1122344556799999999999999999999999999999876654
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=9.6e-52 Score=431.06 Aligned_cols=247 Identities=21% Similarity=0.365 Sum_probs=201.2
Q ss_pred hhcccccCCCeEEEEEEEC------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 374 FSNVIGSSPIGTVYKGTLS------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
+.++||+|+||.||+|++. ++..||||+++.. .....++|.+|+++|++++|||||+++|+|.+.+ .
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~ 117 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR--P 117 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--S
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--E
Confidence 4588999999999999975 4788999998632 2345678999999999999999999999999877 6
Q ss_pred eEEEEEecCCCChhhhhcccC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC
Q 006019 448 RMMVFEYAPNGTLFEHIHIKE-------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY 514 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~-------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~ 514 (664)
.+||||||++|+|.++++... ...++|.++++|+.|||.||+|||+++ ||||||||+|||||+++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~--iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecccccHhhEEECCCC
Confidence 799999999999999986432 246999999999999999999999988 99999999999999999
Q ss_pred ceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHH
Q 006019 515 AAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADY 582 (664)
Q Consensus 515 ~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~ 582 (664)
.+||+|||+++..... +..+.+||......++.++|||||||++|||+| |+.||.. ....+....+
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~--~~~~~~~~~i 273 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAIDCI 273 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS--SCHHHHHHHH
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC--CCHHHHHHHH
Confidence 9999999999865321 235678998888899999999999999999999 9999943 3344444443
Q ss_pred hcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 583 LSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 583 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
..+.. ...+..++.++.+|+.+||+.||++||||+||++.|+.+.+..|
T Consensus 274 ~~g~~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 274 TQGRE----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp HHTCC----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred HcCCC----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 33311 12233455679999999999999999999999999999987644
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-51 Score=424.50 Aligned_cols=251 Identities=24% Similarity=0.424 Sum_probs=200.9
Q ss_pred hhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
.+.+.||+|+||+||+|++++ .||||+++.... .....++|.+|+++|++++|||||+++|+|.++ ..+|||
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---~~~iVm 110 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIVT 110 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC---eEEEEE
Confidence 356889999999999999754 589998864332 234567899999999999999999999999754 458999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
|||++|+|.++|+. ....++|.++++|+.|||.||+|||+.+ ||||||||+|||||+++.+||+|||+|+....
T Consensus 111 Ey~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~--IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 99999999999974 3456999999999999999999999988 99999999999999999999999999986531
Q ss_pred --------hhhhcccccccC---CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 530 --------AEMAATSKKLSS---APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 530 --------~~~~~~~pe~~~---~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
++..+.+||... ...++.|+|||||||++|||+||+.||... ...+.+...+... ...|.+.
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~--~~~~~~~~~~~~~-----~~~p~~~ 260 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI--NNRDQIIFMVGRG-----YASPDLS 260 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC--CCHHHHHHHHHTT-----CCCCCST
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC--ChHHHHHHHHhcC-----CCCCCcc
Confidence 134566788763 345899999999999999999999999432 2222222222221 1223333
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
..+.+++.++.+++.+||+.||++||||.||++.|+.+....|
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 4445566789999999999999999999999999999876544
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.8e-49 Score=417.21 Aligned_cols=258 Identities=18% Similarity=0.284 Sum_probs=204.0
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEEECC------CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCC-CcccceEE
Q 006019 366 ELEAACEDFSNVIGSSPIGTVYKGTLSN------GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNH-KNFVNLIG 438 (664)
Q Consensus 366 el~~~~~~~~~~iG~G~~G~Vy~g~~~~------~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g 438 (664)
|+.+....+.+.||+|+||.||+|++.. ++.||||++.... .....++|.+|+++|++++| ||||+++|
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~----~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc----ChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 3444344456899999999999998643 3579999886432 23345789999999999965 89999999
Q ss_pred EEecCCCceeEEEEEecCCCChhhhhcccC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcC
Q 006019 439 FCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLN 504 (664)
Q Consensus 439 ~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk 504 (664)
+|.+.+. ..+||||||++|+|.++|+... ...++|..++.|+.|||+||+|||+++ |||||||
T Consensus 136 ~~~~~~~-~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~--iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGG-PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLA 212 (353)
T ss_dssp EECCTTS-CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCS
T ss_pred EEEecCC-EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC--eecCccC
Confidence 9976532 4689999999999999997431 345899999999999999999999998 9999999
Q ss_pred CCCeEecCCCceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCC
Q 006019 505 SSAVHLTEDYAAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDN 572 (664)
Q Consensus 505 ~~NILld~~~~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~ 572 (664)
|+|||+++++.+||+|||+|+..... +..+.+||......++.|+|||||||++|||+| |+.||....
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999865321 235678888888889999999999999999999 999995322
Q ss_pred CChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 573 GSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
. .+.+...+..... ...++.++.++.+++.+||+.||++||||.||++.|+++++...
T Consensus 293 ~--~~~~~~~i~~g~~---------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 293 I--DEEFCRRLKEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp C--SHHHHHHHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred H--HHHHHHHHHcCCC---------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 2 2222222222111 12233345679999999999999999999999999999986543
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-48 Score=402.48 Aligned_cols=250 Identities=19% Similarity=0.284 Sum_probs=192.5
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC--ceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP--FTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lV 451 (664)
+.+.||+|+||.||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+.+. ...+||
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 457899999999999998 58999999985322 112234456666788999999999999986542 246899
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC------CCCeEEeCcCCCCeEecCCCceEecccCchh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL------NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN 525 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------~~~ivHrDLk~~NILld~~~~~kl~DfGla~ 525 (664)
||||++|+|.++++. ..++|..+.+|+.|+|+||+|||+. .++||||||||+|||||+++++||+|||+++
T Consensus 80 ~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 999999999999974 3599999999999999999999975 3469999999999999999999999999987
Q ss_pred hhhh-------------hhhhcccccccCCC------CCCcCCcchhhHHHHHHHHhCCCCccCCC-------------C
Q 006019 526 EIAM-------------AEMAATSKKLSSAP------SASLESNVYNFGVLLFEMVTGRLPYLVDN-------------G 573 (664)
Q Consensus 526 ~~~~-------------~~~~~~~pe~~~~~------~~s~ksDVySfGvvl~El~tG~~P~~~~~-------------~ 573 (664)
.... .+..+.+||+.... .++.|+|||||||++|||+||+.|+.... .
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 6532 23456678876543 36789999999999999999987763211 1
Q ss_pred ChHHHHHHHhcCCCCCccccCCCCCC--CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 574 SLEDWAADYLSGVQPLQQFVDPTLSS--FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
...++...... ...+|.+.. ...+++..+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 237 ~~~~~~~~~~~------~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 237 SVEEMRKVVCE------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTT------SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHhc------ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 11222222111 112233322 1235677899999999999999999999999999998753
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.1e-47 Score=400.83 Aligned_cols=239 Identities=19% Similarity=0.338 Sum_probs=195.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|+.||||++...... ....+.|.+|+++|++++|||||++++++.+.+ ..||||
T Consensus 28 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--~~yiVm 102 (350)
T 4b9d_A 28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS---SKEREESRREVAVLANMKHPNIVQYRESFEENG--SLYIVM 102 (350)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEECTTSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC---HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC--EEEEEE
Confidence 4478999999999999964 6899999999765432 344578999999999999999999999999877 789999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
|||++|+|.++++......+++.....|+.||+.||+|||+++ ||||||||+||||++++.+||+|||+|+....
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999997666667899999999999999999999999 99999999999999999999999999986532
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
++..+.+||...+..++.++|||||||++|||+||+.||. ..+..+....+..+... ..+..
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~--~~~~~~~~~~i~~~~~~----------~~~~~ 248 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE--AGSMKNLVLKIISGSFP----------PVSLH 248 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC--CSSHHHHHHHHHHTCCC----------CCCTT
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCC--CcCHHHHHHHHHcCCCC----------CCCcc
Confidence 2345678998888889999999999999999999999994 34555555555543211 11223
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.+.++.+|+.+||+.||++|||+.|+++
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 249 YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 3456899999999999999999999975
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-47 Score=388.85 Aligned_cols=242 Identities=22% Similarity=0.333 Sum_probs=193.1
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecC--CCceeEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEE--EPFTRMM 450 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~l 450 (664)
|.+.||+|+||.||+|+.. ++..||+|++...... ....+.|.+|+++|++++|||||++++++... +....+|
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT---KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 4567999999999999975 5889999998754332 34457899999999999999999999998642 2225799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC-CCceEecccCchhhhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE-DYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~-~~~~kl~DfGla~~~~~ 529 (664)
|||||++|+|.++++. ...+++.....|+.||+.||+|||+++++||||||||+||||+. ++.+||+|||+|+....
T Consensus 107 vmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999999963 35699999999999999999999999888999999999999984 79999999999986532
Q ss_pred -------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 -------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
++..+.+||.... .++.++|||||||++|||+||+.||.. .............+... ... +.
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~-~~~~~~~~~~i~~~~~~--~~~-------~~ 253 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE-CQNAAQIYRRVTSGVKP--ASF-------DK 253 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT-CSSHHHHHHHHTTTCCC--GGG-------GG
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC-CCcHHHHHHHHHcCCCC--CCC-------Cc
Confidence 2345678897764 589999999999999999999999943 22333333333322111 111 11
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+.++.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 254 VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22346889999999999999999999875
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.4e-47 Score=395.27 Aligned_cols=239 Identities=15% Similarity=0.153 Sum_probs=196.0
Q ss_pred hcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 375 SNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
.++||+|+||.||+|+.. +|+.||||++..... +.+|+++|++++|||||++++++.+.+ ..+||||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~--~~~ivmE 130 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGP--WVNIFME 130 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETT--EEEEEEC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----------HHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEEe
Confidence 478999999999999975 689999999964321 246999999999999999999998877 7799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC-ceEecccCchhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY-AAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~-~~kl~DfGla~~~~~--- 529 (664)
||++|+|.++++. ...+++.....|+.||+.||+|||+++ ||||||||+||||+.++ .+||+|||+|+....
T Consensus 131 y~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred ccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 9999999999964 346999999999999999999999999 99999999999999998 699999999986532
Q ss_pred -----------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 530 -----------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 530 -----------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
++..+.+||...+..++.++|||||||++|||+||+.||..... .+....+..+.... .
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i~~~~~~~--------~ 276 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR--GPLCLKIASEPPPI--------R 276 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC--SCCHHHHHHSCCGG--------G
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHHcCCCCc--------h
Confidence 23456789988888899999999999999999999999954322 11222222221111 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
..++.++..+.+++.+||+.||++|||+.|+++.|...+..
T Consensus 277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 12334446789999999999999999999999999887643
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2e-46 Score=390.70 Aligned_cols=236 Identities=19% Similarity=0.272 Sum_probs=195.3
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+.+ ..||||
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~ivm 150 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVM 150 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-----GGGGHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-----HHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEE
Confidence 3478999999999999975 68999999997654332 345889999999999999999999999887 789999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
|||++|+|.+++.. ..+++.....|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++....
T Consensus 151 Ey~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 151 EFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp CCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred eCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 99999999999863 35999999999999999999999999 99999999999999999999999999986532
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
++..+.+||......++.++|||||||++|||+||+.||.. .+..+....+..... +.+ .....
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~-------~~~-~~~~~ 295 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLP-------PRL-KNLHK 295 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSSC-------CCC-SCGGG
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHcCCC-------CCC-Ccccc
Confidence 23466789988888899999999999999999999999943 333333333332211 111 11223
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.+.++.+|+.+||+.||++|||+.|+++
T Consensus 296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 296 VSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 3467899999999999999999998876
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-45 Score=372.27 Aligned_cols=237 Identities=20% Similarity=0.313 Sum_probs=186.7
Q ss_pred hhhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
.+.+.||+|+||+||+|+. .+|+.||||++....... ....+.|.+|+++|++++|||||++++++.+.+ ..++|
T Consensus 16 ~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~--~~~iv 91 (275)
T 3hyh_A 16 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMV 91 (275)
T ss_dssp EEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC--HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EEEEE
Confidence 3458899999999999996 468999999997544322 233567999999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|||+ +|+|.+++.. ...+++.....++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 6899999864 356999999999999999999999999 99999999999999999999999999986532
Q ss_pred ------hhhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 ------AEMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
++..+.+||...+..+ +.++||||+||++|||+||+.||. +.+..+.......+...+ +.
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~--~~~~~~~~~~i~~~~~~~-----------p~ 233 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD--DESIPVLFKNISNGVYTL-----------PK 233 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHTCCCC-----------CT
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCC--CCCHHHHHHHHHcCCCCC-----------CC
Confidence 2345668888776554 689999999999999999999994 334455554444332111 22
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 23356889999999999999999999876
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.3e-45 Score=389.85 Aligned_cols=236 Identities=19% Similarity=0.272 Sum_probs=194.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+++|++++|||||++++++.+.+ ..||||
T Consensus 155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--~~~iVm 227 (423)
T 4fie_A 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGD--ELWVVM 227 (423)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-----GGGHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH-----HHHHHHHHHHHHhCCCCCCCceEEEEEECC--EEEEEE
Confidence 3478999999999999975 68999999997654322 346889999999999999999999999877 789999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
|||++|+|.++++. ..+++.....|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+++.+..
T Consensus 228 Ey~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~--IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 228 EFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp ECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred eCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 99999999999863 35999999999999999999999999 99999999999999999999999999986532
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
++..+.+||......++.++|||||||++|||+||+.||.. .+..+....+..... +.+. ....
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--~~~~~~~~~i~~~~~-------~~~~-~~~~ 372 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--EPPLKAMKMIRDNLP-------PRLK-NLHK 372 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCC-------CCCS-CTTS
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHcCCC-------CCCc-cccc
Confidence 23466789988888899999999999999999999999943 333333333332211 1111 1122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...++.+|+.+||+.||++|||+.|+++
T Consensus 373 ~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 373 VSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 3356889999999999999999999876
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.7e-46 Score=381.47 Aligned_cols=237 Identities=20% Similarity=0.279 Sum_probs=196.7
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
++.+.||+|+||+||+|+.. +|+.||||++....... ....+.+.+|+++|++++|||||++++++.+.+ ..|+|
T Consensus 35 ~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~yiv 110 (311)
T 4aw0_A 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK--ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE--KLYFG 110 (311)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEE
Confidence 34589999999999999964 68999999997543211 123467999999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
||||++|+|.+++.. ...+++.....++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~--IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 111 LSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999999999963 356999999999999999999999999 99999999999999999999999999986531
Q ss_pred ---------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 530 ---------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 530 ---------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
++..+.+||......++.++||||+||++|||+||+.||. ..+..+....+....-. +
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~--~~~~~~~~~~i~~~~~~-----------~ 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR--AGNEGLIFAKIIKLEYD-----------F 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHTCCC-----------C
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC--CCCHHHHHHHHHcCCCC-----------C
Confidence 2345678888877788999999999999999999999994 33445555555443211 1
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIA 630 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 630 (664)
++....++.+|+.+|++.||++|||++|+.
T Consensus 254 p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 PEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 222335688999999999999999999864
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.6e-45 Score=378.09 Aligned_cols=232 Identities=20% Similarity=0.271 Sum_probs=185.1
Q ss_pred hhhcccccCCCeEEEEEEEC----CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 373 DFSNVIGSSPIGTVYKGTLS----NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
++.+.||+|+||+||+|+.. .++.||||++....... .....+.+|+++|++++|||||++++++.+.+ ..
T Consensus 27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~--~~ 101 (304)
T 3ubd_A 27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV---RDRVRTKMERDILVEVNHPFIVKLHYAFQTEG--KL 101 (304)
T ss_dssp EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE---EECC------CCCCCCCCTTEECEEEEEEETT--EE
T ss_pred EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh---HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--EE
Confidence 45589999999999999852 46789999987543221 11236889999999999999999999999877 78
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++|||||++|+|.+++.. ...+++.....++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+...
T Consensus 102 ~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~--IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EEEECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999999964 346999999999999999999999999 9999999999999999999999999998652
Q ss_pred h---------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 529 M---------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 529 ~---------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
. ++..+.+||......++.++||||+||++|||+||+.||. +.+..+....+......
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~--~~~~~~~~~~i~~~~~~----------- 244 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ--GKDRKETMTMILKAKLG----------- 244 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHCCCC-----------
T ss_pred CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCC--CcCHHHHHHHHHcCCCC-----------
Confidence 1 2356678898888889999999999999999999999994 34445555554443211
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTM 626 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 626 (664)
++...+.++.+++.+||+.||++|||+
T Consensus 245 ~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 245 MPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred CCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 122234568899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.4e-44 Score=369.50 Aligned_cols=238 Identities=15% Similarity=0.252 Sum_probs=181.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC-------
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP------- 445 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------- 445 (664)
+.+.||+|+||+||+|+.. +|+.||||++..... ....+.|.+|+++|++++|||||++++++.+.+.
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~----~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 3488999999999999964 689999999875432 3345679999999999999999999999875432
Q ss_pred ---ceeEEEEEecCCCChhhhhcccC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEeccc
Q 006019 446 ---FTRMMVFEYAPNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL 521 (664)
Q Consensus 446 ---~~~~lV~Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~Df 521 (664)
...++|||||++|+|.+++.... ....++.....|+.|++.||+|||+++ |+||||||+|||++.++.+||+||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~--IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc--CccccCcHHHeEECCCCcEEEccC
Confidence 13689999999999999997542 234677888899999999999999999 999999999999999999999999
Q ss_pred Cchhhhhh---------------------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHH
Q 006019 522 SFWNEIAM---------------------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAA 580 (664)
Q Consensus 522 Gla~~~~~---------------------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~ 580 (664)
|+|+.... ++..+.+||...+..++.++|||||||++|||++ ||.... +......
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~~~~~~ 238 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERVRTLT 238 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHHHHHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HHHHHHH
Confidence 99987632 2345668888888889999999999999999997 773211 1111111
Q ss_pred HHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 581 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 581 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.... .............+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~----------~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DVRN----------LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHT----------TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhc----------CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 1111111233345678999999999999999999876
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=361.90 Aligned_cols=248 Identities=15% Similarity=0.171 Sum_probs=188.3
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC----Ccee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE----PFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~ 448 (664)
+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|+++|++++|||||++++++.... ....
T Consensus 58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~---~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD---VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEECcccc---chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 4588999999999999964 699999999864322 1334567899999999999999999999986432 1257
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
|||||||+ |+|.+++. ....+++.....|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.+.
T Consensus 135 ~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~--iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc--CcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 99999996 78999986 3467999999999999999999999999 9999999999999999999999999998653
Q ss_pred h-------------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCc-ccc
Q 006019 529 M-------------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQ-QFV 593 (664)
Q Consensus 529 ~-------------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~ 593 (664)
. ++..+.+||...+ ..++.++||||+||++|||+||+.||... +..+....+........ ...
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~--~~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--NYVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS--SHHHHHHHHHHHHCCCCGGGT
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC--CHHHHHHHHHHhcCCCChHHh
Confidence 2 2334567887554 45789999999999999999999999532 22333222221111000 000
Q ss_pred C--------------CCCCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 594 D--------------PTLSSFD-----EEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 594 d--------------~~~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
. +.....+ +....++.+|+.+||+.||++|||+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 0000001 112356889999999999999999999876
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.1e-41 Score=352.86 Aligned_cols=256 Identities=29% Similarity=0.510 Sum_probs=211.5
Q ss_pred hcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEEe
Q 006019 375 SNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEY 454 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~Ey 454 (664)
.+.||+|+||.||+|++.++..||||++.... ....+.|.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 116 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-----SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN--EMILIYKY 116 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT--CCEEEEEC
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccC-----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--eEEEEEEc
Confidence 37899999999999998889999999876432 224567999999999999999999999998776 66999999
Q ss_pred cCCCChhhhhcccC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 455 APNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 455 ~~~GsL~~~l~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
+++|+|.+++.... ...++|..+.+++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 117 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 194 (321)
T 2qkw_B 117 MENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA--IIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194 (321)
T ss_dssp CTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC
T ss_pred CCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC--eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 99999999986443 245999999999999999999999998 99999999999999999999999999875421
Q ss_pred --------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCC----CCChHHHHHHHhcCCCCCccccCCCC
Q 006019 530 --------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVD----NGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 530 --------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~----~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
....+.+||......++.++||||||+++|||+||+.||... .....+|....... ..+...+++..
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 273 (321)
T 2qkw_B 195 THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQLEQIVDPNL 273 (321)
T ss_dssp CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT-TCCCSSSSSSC
T ss_pred cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc-ccHHHhcChhh
Confidence 133456777766667899999999999999999999999532 22344554433322 34455556554
Q ss_pred C-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 598 S-SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 598 ~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
. ..+.+.+..+.+++.+||+.||++||++.|+++.|+.++...
T Consensus 274 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 3 456788899999999999999999999999999999997653
No 18
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.8e-40 Score=341.37 Aligned_cols=273 Identities=25% Similarity=0.485 Sum_probs=222.6
Q ss_pred CCCCCHHHHHHHHhhhh--------cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCC
Q 006019 359 VPKLKRSELEAACEDFS--------NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNH 430 (664)
Q Consensus 359 ~~~~~~~el~~~~~~~~--------~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H 430 (664)
...+++.++..++.+|. +.||+|+||.||+|.. ++..||||++....... .....+.|.+|++++++++|
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDIT-TEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSC-TTTHHHHHHHHHHHHHHCCC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcc-hHHHHHHHHHHHHHHHhcCC
Confidence 45688999999999886 4699999999999987 67899999986543221 23456789999999999999
Q ss_pred CcccceEEEEecCCCceeEEEEEecCCCChhhhhccc-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeE
Q 006019 431 KNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIK-ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVH 509 (664)
Q Consensus 431 ~niv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~-~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NIL 509 (664)
|||+++++++.+.+ ..++||||+++|+|.+++... ....++|..+..|+.+++.||+|||+.+ ++||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGD--DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH--HIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSS--SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEE
T ss_pred CCeEEEEEEEecCC--ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC--eecCCCCHHHEE
Confidence 99999999998776 569999999999999998643 3456999999999999999999999998 999999999999
Q ss_pred ecCCCceEecccCchhhhhh-----------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCC--CChH
Q 006019 510 LTEDYAAKLSDLSFWNEIAM-----------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDN--GSLE 576 (664)
Q Consensus 510 ld~~~~~kl~DfGla~~~~~-----------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~--~~~~ 576 (664)
+++++.+||+|||+++.... ....+.+||.... .++.++||||||+++|||+||+.||.... ....
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 99999999999999875432 1234556775543 47889999999999999999999995322 2233
Q ss_pred HHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 577 DWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 577 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
.+..........+...+++.+...+......+.+++.+||+.||++||++.+|++.|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 44444333334455566666667778888999999999999999999999999999998854
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.2e-41 Score=351.80 Aligned_cols=271 Identities=28% Similarity=0.558 Sum_probs=219.2
Q ss_pred CCCCCHHHHHHHHhhhh--cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccce
Q 006019 359 VPKLKRSELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNL 436 (664)
Q Consensus 359 ~~~~~~~el~~~~~~~~--~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l 436 (664)
...++..++....++|. +.||+|+||.||+|+..++..||||++....... ....|.+|++++++++||||+++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG----GELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch----HHHHHHHHHHHHHhccCCCccce
Confidence 45677888888877776 8899999999999998889999999986543222 12368999999999999999999
Q ss_pred EEEEecCCCceeEEEEEecCCCChhhhhcccC--CCCCCHHHHHHHHHHHHHHHHHhhcC-CCCeEEeCcCCCCeEecCC
Q 006019 437 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTED 513 (664)
Q Consensus 437 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~ivHrDLk~~NILld~~ 513 (664)
++++...+ ..++||||+++|+|.++++... ...++|..+..|+.+++.||+|||+. .+.|+||||||+|||++.+
T Consensus 93 ~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 93 RGFCMTPT--ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CEEECCSS--CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred EEEEecCC--ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 99998776 5699999999999999997543 34599999999999999999999987 2229999999999999999
Q ss_pred CceEecccCchhhhhh----------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCcc------CCCCChHH
Q 006019 514 YAAKLSDLSFWNEIAM----------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYL------VDNGSLED 577 (664)
Q Consensus 514 ~~~kl~DfGla~~~~~----------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~------~~~~~~~~ 577 (664)
+.+||+|||+++.... ....+.+||......++.++|||||||++|||+||+.||. .......+
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 250 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250 (326)
T ss_dssp CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred CCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence 9999999999875531 2334567777666678899999999999999999999994 22334555
Q ss_pred HHHHHhcCCCCCccccCCCCC-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 006019 578 WAADYLSGVQPLQQFVDPTLS-SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 636 (664)
Q Consensus 578 ~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i 636 (664)
|....... .....+.+.... ..+.+....+.+++.+||+.||++|||+.||++.|++.
T Consensus 251 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 251 WVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHTTTTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 65544433 344455555443 45678888999999999999999999999999999974
No 20
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.1e-40 Score=343.34 Aligned_cols=251 Identities=23% Similarity=0.363 Sum_probs=197.3
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|+. +|..||||++..... .....++|.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 114 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF---HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP--NLSIVTE 114 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC---SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT--CCEEEEE
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--ceEEEEe
Confidence 458899999999999987 578899999864432 2344578999999999999999999999998776 5699999
Q ss_pred ecCCCChhhhhcccC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 454 YAPNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
|+++|+|.++++... ...+++..+..++.+++.||+|||+.+++|+||||||+|||++.++.+||+|||+++.....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 194 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL 194 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc
Confidence 999999999997432 12499999999999999999999998888999999999999999999999999998754322
Q ss_pred -------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 531 -------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 531 -------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
...+.+||......++.++|||||||++|||+||+.||.. ....+........... ...+..
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~--~~~~~~~~~~~~~~~~---------~~~~~~ 263 (309)
T 3p86_A 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN--LNPAQVVAAVGFKCKR---------LEIPRN 263 (309)
T ss_dssp -------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT--SCHHHHHHHHHHSCCC---------CCCCTT
T ss_pred ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhcCCC---------CCCCcc
Confidence 2345678888778889999999999999999999999943 2333333222111111 112233
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
...++.+++.+||+.||++||++.++++.|+.+.+...
T Consensus 264 ~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 34568999999999999999999999999999987543
No 21
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.4e-40 Score=348.84 Aligned_cols=183 Identities=14% Similarity=0.292 Sum_probs=155.6
Q ss_pred hhcccccCCCeEEEEEEEC----CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTLS----NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||+||+|+.+ .++.||+|++.... ...++.+|+++|+++ +|||||++++++.+.+ ..
T Consensus 25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--~~ 95 (361)
T 4f9c_A 25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--HV 95 (361)
T ss_dssp EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT--EE
T ss_pred EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC--EE
Confidence 4488999999999999853 46789999885321 235688999999998 6999999999998877 78
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC-CceEecccCchhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED-YAAKLSDLSFWNEI 527 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~-~~~kl~DfGla~~~ 527 (664)
++|||||++|+|.++++ .+++.....++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g--IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG--IVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC--eEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999984 4899999999999999999999999 9999999999999977 79999999999743
Q ss_pred hh-------------------------------------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCcc
Q 006019 528 AM-------------------------------------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYL 569 (664)
Q Consensus 528 ~~-------------------------------------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~ 569 (664)
.. ++..+.+||...+ +.++.++||||+||++|||+||+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 21 2345667886654 458999999999999999999999996
Q ss_pred CCC
Q 006019 570 VDN 572 (664)
Q Consensus 570 ~~~ 572 (664)
...
T Consensus 249 ~~~ 251 (361)
T 4f9c_A 249 KAS 251 (361)
T ss_dssp CCS
T ss_pred CCC
Confidence 443
No 22
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.6e-40 Score=367.27 Aligned_cols=240 Identities=20% Similarity=0.300 Sum_probs=196.3
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++|++++|||||++++++.+.+ ..+||
T Consensus 160 ~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~iv 232 (573)
T 3uto_A 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN--EMVMI 232 (573)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEE
Confidence 35588999999999999975 68999999986532 233567899999999999999999999998877 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC--CceEecccCchhhhhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED--YAAKLSDLSFWNEIAM 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~--~~~kl~DfGla~~~~~ 529 (664)
||||++|+|.+++.. ....+++.....++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+++.+..
T Consensus 233 ~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~--iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 233 YEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN--YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp EECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred EeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999999999853 3457999999999999999999999999 9999999999999855 8999999999987642
Q ss_pred --------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 530 --------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 530 --------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
++..+.+||...+..++.++||||+||++|||++|+.||. +.+..+....+........... .
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~--~~~~~~~~~~i~~~~~~~~~~~---~---- 380 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG--GENDDETLRNVKSCDWNMDDSA---F---- 380 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSC--CSSHHHHHHHHHTTCCCCCSGG---G----
T ss_pred CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCC--CcCHHHHHHHHHhCCCCCCccc---c----
Confidence 2345678898888889999999999999999999999994 3344444444443322211111 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.....++.+|+.+||+.||++||++.|+++
T Consensus 381 ~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 381 SGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122356889999999999999999999876
No 23
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.8e-40 Score=362.32 Aligned_cols=245 Identities=22% Similarity=0.356 Sum_probs=201.5
Q ss_pred hhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
.+.+.||+|+||.||+|.+.++..||||++.... ...++|.+|+++|++++|||||++++++.. + ..++||
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~--~~~lv~ 261 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS------MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--PIYIIT 261 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS------BCHHHHHHHHHHHTTCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecCCC------ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C--ccEEEE
Confidence 3458899999999999999889999999986432 125689999999999999999999999873 3 468999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
|||++|+|.++++......+++..+.+++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 9999999999997544456899999999999999999999998 999999999999999999999999999875321
Q ss_pred --------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 531 --------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 531 --------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+.. ...+
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~--~~~~~~~~~i~~~~~----------~~~~ 407 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG--MSNPEVIRALERGYR----------MPRP 407 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--CCHHHHHHHHHHTCC----------CCCC
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCCC----------CCCC
Confidence 124567887766778999999999999999999 9999943 333343333332211 1112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
..++.++.+++.+||+.||++||+|.+|++.|+++....
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 334567999999999999999999999999999997654
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.5e-40 Score=351.77 Aligned_cols=247 Identities=21% Similarity=0.343 Sum_probs=199.6
Q ss_pred hhcccccCCCeEEEEEEEC--------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCC
Q 006019 374 FSNVIGSSPIGTVYKGTLS--------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEE 444 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~--------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 444 (664)
+.+.||+|+||.||+|+.. ++..||||++.... .....+++.+|+++++++ +||||++++++|.+.+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC----BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc----CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 4588999999999999862 35679999886432 234457899999999999 8999999999998877
Q ss_pred CceeEEEEEecCCCChhhhhcccC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIKE--------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL 510 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl 510 (664)
..++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ |+||||||+|||+
T Consensus 161 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll 236 (370)
T 2psq_A 161 --PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLV 236 (370)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEE
T ss_pred --CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeccccchhhEEE
Confidence 5699999999999999987432 245899999999999999999999998 9999999999999
Q ss_pred cCCCceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHH
Q 006019 511 TEDYAAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDW 578 (664)
Q Consensus 511 d~~~~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~ 578 (664)
+.++.+||+|||+++..... ...+.+||......++.++|||||||++|||+| |+.||... ...+.
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~--~~~~~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--PVEEL 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--CGGGH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHH
Confidence 99999999999998754321 134677887777789999999999999999999 99999532 22222
Q ss_pred HHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 579 AADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 579 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
......+. ....+..+..++.+++.+||+.||++||++.|+++.|++++...
T Consensus 315 ~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 315 FKLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHHHTTC----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 22222211 11122334467899999999999999999999999999987653
No 25
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=340.97 Aligned_cols=248 Identities=20% Similarity=0.326 Sum_probs=200.3
Q ss_pred hhhcccccCCCeEEEEEEEC----CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 373 DFSNVIGSSPIGTVYKGTLS----NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
.+.+.||+|+||.||+|++. .+..||||++.... .....+.|.+|++++++++||||+++++++.+.+ ..
T Consensus 52 ~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 125 (325)
T 3kul_A 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY----TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR--LA 125 (325)
T ss_dssp EEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG--CC
T ss_pred EEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--cc
Confidence 34588999999999999974 35569999986332 2345678999999999999999999999998776 56
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+++|+|.++++. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 126 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 999999999999999863 3456999999999999999999999998 9999999999999999999999999988653
Q ss_pred hh------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCC
Q 006019 529 MA------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDP 595 (664)
Q Consensus 529 ~~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 595 (664)
.. ...+.+||......++.++|||||||++|||+| |+.||.. ....+..........
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~--~~~~~~~~~~~~~~~-------- 272 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN--MTNRDVISSVEEGYR-------- 272 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT--SCHHHHHHHHHTTCC--------
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc--CCHHHHHHHHHcCCC--------
Confidence 21 123567777766678899999999999999999 9999942 233333333322211
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 596 TLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 596 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
...+..++..+.+++.+||+.||++||++.+|++.|+.+.....
T Consensus 273 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 --LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred --CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 11122334678999999999999999999999999999986533
No 26
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.7e-40 Score=352.61 Aligned_cols=244 Identities=25% Similarity=0.354 Sum_probs=197.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|++. ++..||||.+.... .....++|.+|+++|++++|||||+++|+|...+ ..++||
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 191 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL----PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--PIYIVM 191 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS----CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS--SCEEEE
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccC----CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC--CcEEEE
Confidence 4588999999999999986 68999999886321 2334567999999999999999999999998776 569999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.++++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 192 e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999999963 3346899999999999999999999998 999999999999999999999999998754321
Q ss_pred ---------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 531 ---------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 531 ---------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+ .. ...
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~--~~~~~~~~~~~~~-~~---------~~~ 336 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN--LSNQQTREFVEKG-GR---------LPC 336 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTT--SCHHHHHHHHHTT-CC---------CCC
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcC-CC---------CCC
Confidence 223567777666678899999999999999999 9999943 2222222222211 11 112
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
+..++..+.+++.+||+.||++||||.++++.|+++.+
T Consensus 337 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 23344678999999999999999999999999999864
No 27
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=8e-40 Score=358.37 Aligned_cols=247 Identities=23% Similarity=0.363 Sum_probs=200.5
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|.+.++..||||++..... ..++|.+|+++|++++||||+++++++.+ + ..++|||
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~--~~~iv~e 258 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVTE 258 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEEC
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C--ceEEEeh
Confidence 4578999999999999998888899999864321 24679999999999999999999999976 3 4589999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA--- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~--- 530 (664)
|+++|+|.++++......+++..+..++.+++.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 999999999997544456999999999999999999999998 999999999999999999999999999865321
Q ss_pred -------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 531 -------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 531 -------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+.. ...+.
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~--~~~~~~~~~i~~~~~----------~~~~~ 404 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG--MVNREVLDQVERGYR----------MPCPP 404 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT--CCHHHHHHHHHTTCC----------CCCCT
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCCC----------CCCCC
Confidence 124667887766778999999999999999999 9999942 333333333322211 11233
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCCC
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG 643 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~ 643 (664)
.++..+.+++.+||+.||++||++.++++.|+++.....+.
T Consensus 405 ~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 405 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 44567899999999999999999999999999998765443
No 28
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6.6e-40 Score=358.81 Aligned_cols=243 Identities=24% Similarity=0.379 Sum_probs=198.8
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|.+. +..||||+++... ..++|.+|+++|++++|||||++++++.+.+. ..++|||
T Consensus 197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~iv~e 267 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTE 267 (450)
T ss_dssp EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS-CEEEEEE
T ss_pred EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC-ceEEEEE
Confidence 4488999999999999985 7799999986432 23679999999999999999999999876542 4699999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA--- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~--- 530 (664)
||++|+|.++++......+++..+..++.+++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 345 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 345 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccC
Confidence 999999999998655556899999999999999999999998 999999999999999999999999998755322
Q ss_pred ---hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHH
Q 006019 531 ---EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLE 606 (664)
Q Consensus 531 ---~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 606 (664)
...+.+||......++.++|||||||++|||+| |+.||.... ..+.......+. ....+..++.
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~----------~~~~p~~~~~ 413 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGY----------KMDAPDGCPP 413 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC--TTTHHHHHHTTC----------CCCCCTTCCH
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC----------CCCCCCcCCH
Confidence 234567887777789999999999999999999 999995322 222222222221 1122334456
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 607 TLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 607 ~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
.+.+++.+||+.||++||++.++++.|+++...
T Consensus 414 ~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 414 AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 799999999999999999999999999998753
No 29
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-40 Score=369.14 Aligned_cols=245 Identities=21% Similarity=0.345 Sum_probs=200.6
Q ss_pred hhhhcccccCCCeEEEEEEECC-CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLSN-GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~~-~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
..+.+.||+|+||.||+|++.. +..||||.+..... ..++|.+|+++|++++|||||+++++|...+ ..++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~l 293 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYI 293 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SCEE
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc------chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--cEEE
Confidence 3455899999999999999865 88999999864321 2467999999999999999999999998876 5699
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 530 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~ 530 (664)
|||||++|+|.++++......+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 999999999999998656667999999999999999999999998 999999999999999999999999999865321
Q ss_pred ----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 531 ----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 531 ----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
...+.+||......++.++|||||||++|||+| |+.||.... ..+.......+ .. ..
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~-~~---------~~ 439 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKD-YR---------ME 439 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTT-CC---------CC
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcC-CC---------CC
Confidence 124567777666678899999999999999999 999995322 22222222111 10 11
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
.+..++..+.+++.+||+.||++||+|.+|++.|+.+..
T Consensus 440 ~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 440 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 233345678999999999999999999999999998864
No 30
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=9e-40 Score=348.89 Aligned_cols=244 Identities=20% Similarity=0.346 Sum_probs=191.5
Q ss_pred hhcccccCCCeEEEEEEEC----CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS----NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.||+|+||.||+|++. ++..||||.+.... .....++|.+|++++++++||||+++++++.+.+ ..+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~ 122 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY----TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVM 122 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--SCE
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--ceE
Confidence 4588999999999999875 57789999986432 2345678999999999999999999999998776 569
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+||||+++|+|.++++. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999999973 3457999999999999999999999998 99999999999999999999999999986532
Q ss_pred h------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 530 A------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 530 ~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
. ...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+. .
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~--~~~~~~~~~i~~~~-~-------- 268 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE--MSNQDVIKAVDEGY-R-------- 268 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT--CCHHHHHHHHHTTE-E--------
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCC-C--------
Confidence 1 123567787777778999999999999999998 9999943 23333333322211 0
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
...+..++..+.+++.+||+.||++||+|.+|++.|+++..
T Consensus 269 -~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 269 -LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp -CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 01122334678999999999999999999999999999864
No 31
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=349.11 Aligned_cols=270 Identities=21% Similarity=0.322 Sum_probs=205.0
Q ss_pred hhhhcccccCCCeEEEEEEEC--------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEec
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS--------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEE 442 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~--------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 442 (664)
..+.+.||+|+||.||+|+.. .+..||||++.... .....+++.+|+++++++ +|||||++++++..
T Consensus 71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA----TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc----CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 345589999999999999852 24579999886432 234457899999999999 99999999999988
Q ss_pred CCCceeEEEEEecCCCChhhhhcccC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCe
Q 006019 443 EEPFTRMMVFEYAPNGTLFEHIHIKE--------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAV 508 (664)
Q Consensus 443 ~~~~~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NI 508 (664)
.+ ..++||||+++|+|.+++.... ...+++..+.+|+.+++.||+|||+.+ |+||||||+||
T Consensus 147 ~~--~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NI 222 (382)
T 3tt0_A 147 DG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNV 222 (382)
T ss_dssp SS--SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGE
T ss_pred CC--ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCcceE
Confidence 77 5699999999999999987543 245999999999999999999999998 99999999999
Q ss_pred EecCCCceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChH
Q 006019 509 HLTEDYAAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLE 576 (664)
Q Consensus 509 Lld~~~~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~ 576 (664)
|+++++.+||+|||+++..... ...+.+||......++.++|||||||++|||+| |+.||. .....
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~--~~~~~ 300 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP--GVPVE 300 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSST--TCCHH
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC--CCCHH
Confidence 9999999999999998755321 234667887777788999999999999999999 999994 33334
Q ss_pred HHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCCCCCCCCCcchHHHH
Q 006019 577 DWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAIPKLSPLWWAEI 656 (664)
Q Consensus 577 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~~~~~~~~~~~~ 656 (664)
+.......... ...+..+..++.+++.+||+.||++||+++||++.|+++.........+......+...
T Consensus 301 ~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T 3tt0_A 301 ELFKLLKEGHR----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYYHHHHHHDY 370 (382)
T ss_dssp HHHHHHHTTCC----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC------------
T ss_pred HHHHHHHcCCC----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCCCccccccC
Confidence 44433332211 01122234568999999999999999999999999999998877777766666666665
Q ss_pred hhhhc
Q 006019 657 EILST 661 (664)
Q Consensus 657 ~~~~~ 661 (664)
++...
T Consensus 371 ~~~~~ 375 (382)
T 3tt0_A 371 DIPTT 375 (382)
T ss_dssp -----
T ss_pred CCCCC
Confidence 55443
No 32
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=8e-40 Score=337.75 Aligned_cols=257 Identities=18% Similarity=0.272 Sum_probs=196.0
Q ss_pred hhhcccccCCCeEEEEEEE-----CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 373 DFSNVIGSSPIGTVYKGTL-----SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-----~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
.+.+.||+|+||.||+|++ .++..||||++.... ....+.|.+|++++++++||||+++++++...+...
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp EEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred hhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 3458899999999999985 258899999886322 344578999999999999999999999996543225
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhh
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~ 527 (664)
.++||||+++|+|.+++... ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred eEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 68999999999999998643 345999999999999999999999998 999999999999999999999999999865
Q ss_pred hhh------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC-------C
Q 006019 528 AMA------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ-------P 588 (664)
Q Consensus 528 ~~~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~-------~ 588 (664)
... ...+.+||......++.++||||||+++|||+||..|+... ..++......... .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH---HHHHHHHHCTTCCTHHHHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCC---hHHHHhhhcCccccchhHHHH
Confidence 321 12356788777777899999999999999999999987321 1111110000000 0
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 589 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 589 ~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
...+........+..++.++.+++.+||+.||++||++.|+++.|+++.+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 0000011111223444567999999999999999999999999999987643
No 33
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.2e-39 Score=363.04 Aligned_cols=240 Identities=15% Similarity=0.205 Sum_probs=189.3
Q ss_pred hcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCC-CchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 375 SNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKD-WPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~-~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
.+.||+|+||.||+|+.. +|+.||+|++....... ...........++++++.++|||||++++++.+.+ ..|+||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~--~lylVm 271 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--KLSFIL 271 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--EEEEEE
Confidence 388999999999999975 68999999997543211 11122233345577788889999999999998877 789999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
|||++|+|.+++.. ...+++.....++.+|+.||+|||+++ ||||||||+|||||.++.+||+|||+|+....
T Consensus 272 Ey~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g--IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~ 347 (689)
T 3v5w_A 272 DLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP 347 (689)
T ss_dssp CCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCchHHeEEeCCCCEEecccceeeecCCCCC
Confidence 99999999999964 356999999999999999999999999 99999999999999999999999999986632
Q ss_pred ----hhhhcccccccC-CCCCCcCCcchhhHHHHHHHHhCCCCccCCC-CChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ----AEMAATSKKLSS-APSASLESNVYNFGVLLFEMVTGRLPYLVDN-GSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ----~~~~~~~pe~~~-~~~~s~ksDVySfGvvl~El~tG~~P~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
++..+.+||... +..++.++||||+||++|||+||+.||.... ....+.......... .++..
T Consensus 348 ~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~-----------~~p~~ 416 (689)
T 3v5w_A 348 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-----------ELPDS 416 (689)
T ss_dssp CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-----------CCCTT
T ss_pred CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC-----------CCCcc
Confidence 345667899875 4578999999999999999999999996432 233333333332211 11222
Q ss_pred HHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPT-----MRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~ 631 (664)
...++.+|+.+|++.||++|++ +.||.+
T Consensus 417 ~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 417 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 3456899999999999999998 566654
No 34
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-39 Score=328.09 Aligned_cols=243 Identities=23% Similarity=0.372 Sum_probs=199.5
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|+..++..||+|++..... ..++|.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 85 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVFE 85 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEE
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEeccccc------CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--ceEEEEE
Confidence 4578999999999999998899999999864322 2367999999999999999999999998876 5799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA--- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~--- 530 (664)
|+++|+|.++++. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 86 FMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp CCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred eCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC--eecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 9999999999863 3456899999999999999999999999 999999999999999999999999998865321
Q ss_pred -------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 531 -------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 531 -------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
...+.+||......++.++||||||+++|||+| |+.||. .....+.......... .. .+.
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~--~~~~~~~~~~~~~~~~----~~------~~~ 230 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NRSNSEVVEDISTGFR----LY------KPR 230 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT--TCCHHHHHHHHHTTCC----CC------CCT
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCC--CCCHHHHHHHHhcCcc----CC------CCC
Confidence 123567787776778999999999999999999 999994 3333344333332211 01 112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
.....+.+++.+||+.||++||++.++++.|+++.+.
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 2235688999999999999999999999999998753
No 35
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=336.51 Aligned_cols=246 Identities=20% Similarity=0.278 Sum_probs=196.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..||+|++... .....+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~-----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 86 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF-----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFIT 86 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCC-----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccC-----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--eeEEEE
Confidence 3478999999999999975 5889999987432 2345678999999999999999999999999877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.++++. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 87 EYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp ECCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred EecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 99999999999974 3456999999999999999999999999 99999999999999999999999999875421
Q ss_pred --------------------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCC
Q 006019 530 --------------------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL 589 (664)
Q Consensus 530 --------------------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~ 589 (664)
....+.+||......++.++|||||||++|||+||..|+.......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------~~~~ 236 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-------GLNV 236 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------SBCH
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------hhhh
Confidence 1233667888888888999999999999999999999984221100000 0000
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 590 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 590 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
....+.. .+..++..+.+++.+||+.||++||++.++++.|+++...
T Consensus 237 ~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 237 RGFLDRY---CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHHHHHT---CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcccccc---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 0000000 1122234588999999999999999999999999998654
No 36
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-39 Score=337.76 Aligned_cols=252 Identities=24% Similarity=0.429 Sum_probs=196.5
Q ss_pred hhhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
..+.+.||+|+||.||+|+..+ .+|+|+++.... .....+.|.+|++++++++||||+++++++... ..++|
T Consensus 38 ~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv 109 (307)
T 3lb7_A 38 VMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP---TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD---NLAIV 109 (307)
T ss_dssp CCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEE
T ss_pred eEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC---cEEEE
Confidence 3456889999999999998643 588888765332 234557899999999999999999999998654 35899
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|||+++|+|.++++. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~ 186 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp EECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCSSSEEECTTSCEEECCCCSSCC-----
T ss_pred EecCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--EeeCCCChhhEEEcCCCCEEEccCCCceeccccc
Confidence 999999999999863 3457999999999999999999999998 99999999999999999999999999875421
Q ss_pred ---------hhhhcccccccC---CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 530 ---------AEMAATSKKLSS---APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 530 ---------~~~~~~~pe~~~---~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
....+.+||... ...++.++|||||||++|||+||+.||.... ............ ...+.+
T Consensus 187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~-~~~~~~~~~~~~------~~~~~~ 259 (307)
T 3lb7_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-NRDQIIFMVGRG------YASPDL 259 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-CHHHHHHHHHHT------CCCCCS
T ss_pred ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC-cHHHHHHHHhcC------CCCcch
Confidence 123345677653 5567889999999999999999999995322 222222211111 111222
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
......++..+.+++.+||+.+|++||++.++++.|+.+....|
T Consensus 260 ~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 22233445678999999999999999999999999999987654
No 37
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.7e-38 Score=332.12 Aligned_cols=251 Identities=19% Similarity=0.257 Sum_probs=201.4
Q ss_pred CCCCHHHHHHHHhh------------hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHh
Q 006019 360 PKLKRSELEAACED------------FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLS 426 (664)
Q Consensus 360 ~~~~~~el~~~~~~------------~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~ 426 (664)
+.++.+++..+++. +.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~ 97 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-----RRELLFNEVVIMR 97 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----SHHHHHHHHHHHT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh-----HHHHHHHHHHHHH
Confidence 45778888887764 2368999999999999976 6999999998754322 2467899999999
Q ss_pred ccCCCcccceEEEEecCCCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCC
Q 006019 427 KVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSS 506 (664)
Q Consensus 427 ~l~H~niv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~ 506 (664)
+++||||+++++++...+ ..++||||+++|+|.+++.. ..+++..+..++.+++.||+|||+.+ |+||||||+
T Consensus 98 ~l~h~niv~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~ 170 (321)
T 2c30_A 98 DYQHFNVVEMYKSYLVGE--ELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG--VIHRDIKSD 170 (321)
T ss_dssp TCCCTTBCCEEEEEEETT--EEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGG
T ss_pred hCCCCCcceEEEEEEECC--EEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHH
Confidence 999999999999998877 67999999999999999853 46999999999999999999999998 999999999
Q ss_pred CeEecCCCceEecccCchhhhhh---------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHH
Q 006019 507 AVHLTEDYAAKLSDLSFWNEIAM---------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLED 577 (664)
Q Consensus 507 NILld~~~~~kl~DfGla~~~~~---------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~ 577 (664)
|||++.++.+||+|||+++.... ....+.+||......++.++|||||||++|||+||+.||.. ....+
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~--~~~~~ 248 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS--DSPVQ 248 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHH
T ss_pred HEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC--CCHHH
Confidence 99999999999999999875532 23346678888778889999999999999999999999943 22333
Q ss_pred HHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 578 WAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 578 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.......... +... .....+..+.+++.+||+.||++||++.++++.
T Consensus 249 ~~~~~~~~~~-------~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 249 AMKRLRDSPP-------PKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHSSC-------CCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHhcCCC-------CCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3332222211 1111 112234568899999999999999999998873
No 38
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.8e-39 Score=338.20 Aligned_cols=247 Identities=19% Similarity=0.271 Sum_probs=192.9
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC--ceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP--FTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~--~~~~lV 451 (664)
+.+.||+|+||.||+|++. ++.||||++.... .....+..|+.++++++|||||++++++..... ...++|
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCc------hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 4478999999999999985 7899999985432 234556779999999999999999999987542 246899
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC----------CCCeEEeCcCCCCeEecCCCceEeccc
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL----------NPPIAHNYLNSSAVHLTEDYAAKLSDL 521 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~----------~~~ivHrDLk~~NILld~~~~~kl~Df 521 (664)
|||+++|+|.++++. ..++|..+..|+.+++.||+|||+. + |+||||||+|||++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~--ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA--ISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE--EECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC--EEeCCCChHhEEECCCCeEEEccC
Confidence 999999999999964 3499999999999999999999988 6 999999999999999999999999
Q ss_pred Cchhhhhh-----------hhhhcccccccCC-----CCCCcCCcchhhHHHHHHHHhCCCCccCCCC------------
Q 006019 522 SFWNEIAM-----------AEMAATSKKLSSA-----PSASLESNVYNFGVLLFEMVTGRLPYLVDNG------------ 573 (664)
Q Consensus 522 Gla~~~~~-----------~~~~~~~pe~~~~-----~~~s~ksDVySfGvvl~El~tG~~P~~~~~~------------ 573 (664)
|+++.... ....+.+||.... ..++.++|||||||++|||+||+.||.....
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99965432 1334556776654 3456788999999999999999999953221
Q ss_pred --ChHHHHHHHhcCCCCCccccCCCCCC--CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 574 --SLEDWAADYLSGVQPLQQFVDPTLSS--FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 574 --~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
...++....... ...+.+.. .....+.++.+++.+||+.||++|||+.||++.|+++.+
T Consensus 256 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 256 HPSLEDMQEVVVHK------KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp SCCHHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcc------cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 112222211111 11111111 123456779999999999999999999999999999865
No 39
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.7e-39 Score=327.90 Aligned_cols=250 Identities=22% Similarity=0.361 Sum_probs=198.5
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|++. +..+|||++..... .....+.|.+|++++++++||||+++++++.+.+....++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW---STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC---CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred HHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence 4578999999999999985 88899999875432 2345578999999999999999999999998763336799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh----
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---- 529 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~---- 529 (664)
|+++|+|.++++......+++..+..|+.+++.||+|||+.+++++||||||+||+++.++.++|+|||++.....
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 169 (271)
T 3kmu_A 90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRM 169 (271)
T ss_dssp CCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCB
T ss_pred ccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCcc
Confidence 9999999999986555579999999999999999999999888899999999999999999999998887654322
Q ss_pred hhhhcccccccCCCCC---CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHH
Q 006019 530 AEMAATSKKLSSAPSA---SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLE 606 (664)
Q Consensus 530 ~~~~~~~pe~~~~~~~---s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 606 (664)
....+.+||....... +.++||||||+++|||+||+.||.. ....+........... + ..+...+.
T Consensus 170 ~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~--~~~~~~~~~~~~~~~~------~---~~~~~~~~ 238 (271)
T 3kmu_A 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD--LSNMEIGMKVALEGLR------P---TIPPGISP 238 (271)
T ss_dssp SCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT--SCHHHHHHHHHHSCCC------C---CCCTTCCH
T ss_pred CCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc--cChHHHHHHHHhcCCC------C---CCCCCCCH
Confidence 2345567776654433 3479999999999999999999943 2333333332222111 1 11223345
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 607 TLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 607 ~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
.+.+++.+||+.||++||++.++++.|+++.+
T Consensus 239 ~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 68999999999999999999999999998864
No 40
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=361.98 Aligned_cols=246 Identities=23% Similarity=0.363 Sum_probs=201.7
Q ss_pred hhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
.+.+.||+|+||.||+|++.++..||||++..... ..++|.+|+++|++++|+|||++++++.+ + ..++||
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~--~~~lv~ 340 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E--PIYIVT 340 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--SCEEEE
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeCCCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c--cceEee
Confidence 45588999999999999998888999999864331 24679999999999999999999999976 3 468999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
|||++|+|.++++......+++..+..|+.+|+.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 9999999999997544456999999999999999999999998 999999999999999999999999999865321
Q ss_pred --------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 531 --------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 531 --------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+. . ...+
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~--~~~~~~~~~i~~~~-~---------~~~~ 486 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG--MVNREVLDQVERGY-R---------MPCP 486 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT--CCHHHHHHHHHTTC-C---------CCCC
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCC-C---------CCCC
Confidence 124567777766778999999999999999999 9999942 33333333332221 1 1122
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
..++..+.+++.+||+.||++||+|.+|++.|+++.....
T Consensus 487 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 3344678999999999999999999999999999876543
No 41
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.5e-39 Score=329.17 Aligned_cols=244 Identities=21% Similarity=0.349 Sum_probs=197.6
Q ss_pred hhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
.+.+.||+|+||.||+|+..++..||+|++..... ..+++.+|++++++++||||+++++++.+.+ ..++||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 82 (268)
T 3sxs_A 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM------SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--PIYIVT 82 (268)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--SEEEEE
T ss_pred eeeeeeccCCCceEEEEEecCceeEEEEEeccCCC------cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--ceEEEE
Confidence 34588999999999999999888999999864332 2367999999999999999999999998776 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.+++... ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 83 EYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp ECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred EccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 999999999998642 345999999999999999999999998 999999999999999999999999998755322
Q ss_pred --------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 531 --------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 531 --------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
...+.+||......++.++||||||+++|||+| |+.||.. ....+.......... ... +
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--~~~~~~~~~~~~~~~----~~~------~ 227 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL--YTNSEVVLKVSQGHR----LYR------P 227 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT--SCHHHHHHHHHTTCC----CCC------C
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc--cChHHHHHHHHcCCC----CCC------C
Confidence 123556776666667889999999999999999 9999942 233333333322211 111 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
...+..+.+++.+||+.||++||++.++++.|+.+.+.
T Consensus 228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 12235688999999999999999999999999998754
No 42
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-39 Score=336.74 Aligned_cols=247 Identities=21% Similarity=0.335 Sum_probs=199.2
Q ss_pred hhcccccCCCeEEEEEEEC------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 374 FSNVIGSSPIGTVYKGTLS------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
+.+.||+|+||.||+|+.. ++..||||.+.... .....+.|.+|++++++++||||+++++++...+ .
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~ 124 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK--P 124 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--S
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc----CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC--c
Confidence 4478999999999999974 34789999986332 2345678999999999999999999999998776 5
Q ss_pred eEEEEEecCCCChhhhhcccC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCC
Q 006019 448 RMMVFEYAPNGTLFEHIHIKE----------------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNS 505 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~----------------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~ 505 (664)
.++||||+++|+|.++++... ...+++..+..|+.+++.||+|||+.+ |+||||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp 202 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLAT 202 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSG
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCc
Confidence 699999999999999986432 256999999999999999999999998 99999999
Q ss_pred CCeEecCCCceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCC
Q 006019 506 SAVHLTEDYAAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNG 573 (664)
Q Consensus 506 ~NILld~~~~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~ 573 (664)
+|||++.++.+||+|||+++..... ...+.+||......++.++||||||+++|||+| |+.||.. .
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~--~ 280 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG--M 280 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT--S
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC--C
Confidence 9999999999999999999865322 123567777666678999999999999999999 9999943 2
Q ss_pred ChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 574 SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
...+.......+. ....+..++..+.+++.+||+.||++||++.++++.|+++.+..
T Consensus 281 ~~~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 281 AHEEVIYYVRDGN----------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp CHHHHHHHHHTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ChHHHHHHHhCCC----------cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 3333333332221 11122334457899999999999999999999999999987643
No 43
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.1e-38 Score=325.72 Aligned_cols=248 Identities=24% Similarity=0.431 Sum_probs=195.8
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhH---HHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNL---EVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~---~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.||+|+||.||+|+.. ++..||+|++........ ... .+.|.+|++++++++||||+++++++.+.. +
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~ 97 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE-TEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP----R 97 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCC-HHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT----E
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccc-hhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC----e
Confidence 4578999999999999974 689999999865443321 111 167999999999999999999999996543 6
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc-----eEecccCch
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA-----AKLSDLSFW 524 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~-----~kl~DfGla 524 (664)
+||||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+++|+||||||+|||++.++. +||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~ 176 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176 (287)
T ss_dssp EEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred EEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence 99999999999998863 345799999999999999999999998878999999999999988776 999999998
Q ss_pred hhhhhh------hhhccccccc--CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 525 NEIAMA------EMAATSKKLS--SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 525 ~~~~~~------~~~~~~pe~~--~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
+..... ...+.+||.. ....++.++|||||||++|||+||+.||................... . +
T Consensus 177 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~----~- 249 (287)
T 4f0f_A 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL--R----P- 249 (287)
T ss_dssp BCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC--C----C-
T ss_pred ccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC--C----C-
Confidence 755322 2345678876 34456889999999999999999999996544433333333222111 0 1
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 636 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i 636 (664)
..+...+..+.+++.+||+.||++||++.++++.|+++
T Consensus 250 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 250 --TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 12233346789999999999999999999999999874
No 44
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.3e-39 Score=331.00 Aligned_cols=242 Identities=19% Similarity=0.335 Sum_probs=195.1
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|.+.++..||+|++..... ..++|.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 99 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM------SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--PIFIITE 99 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTSB------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SEEEEEC
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC------CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--CeEEEEe
Confidence 4588999999999999999888999999864322 2367999999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhhh--
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-- 531 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~~-- 531 (664)
|+++|+|.+++... ...+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 100 YMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp CCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred ccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 99999999998642 346999999999999999999999998 9999999999999999999999999987653221
Q ss_pred --------hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 532 --------MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 532 --------~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
..+.+||......++.++||||||+++|||+| |+.||.. ....+........... ..+.
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~--~~~~~~~~~~~~~~~~----------~~~~ 244 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER--FTNSETAEHIAQGLRL----------YRPH 244 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT--SCHHHHHHHHHTTCCC----------CCCT
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc--cChhHHHHHHhcccCC----------CCCC
Confidence 23567777766778999999999999999999 9999943 2233333333222111 1111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
.....+.+++.+||+.||++||++.++++.|+++.+
T Consensus 245 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 245 LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 223568899999999999999999999999999875
No 45
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-38 Score=333.06 Aligned_cols=237 Identities=22% Similarity=0.323 Sum_probs=194.0
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~ 93 (328)
T 3fe3_A 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN---PTSLQKLFREVRIMKILNHPNIVKLFEVIETEK--TLYLIM 93 (328)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--EEEEEE
Confidence 347899999999999997 57899999998754322 344567899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.+++... ..+++.....++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp CCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred ECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999998643 45899999999999999999999998 999999999999999999999999999765321
Q ss_pred ------hhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 531 ------EMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 531 ------~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
...+.+||......+ +.++|||||||++|||+||+.||. +.+..+.......+.... +..
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~--~~~~~~~~~~i~~~~~~~-----------p~~ 236 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD--GQNLKELRERVLRGKYRI-----------PFY 236 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHCCCCC-----------CTT
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCC--CCCHHHHHHHHHhCCCCC-----------CCC
Confidence 234567777665555 478999999999999999999994 344455544444432211 112
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
....+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 237 MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 23568899999999999999999998763
No 46
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-39 Score=344.01 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=190.4
Q ss_pred hhcccccCCCeEEEEEEEC--CC--cEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS--NG--VEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~--~~--~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.||+|+||.||+|++. ++ ..||||.+.... .....++|.+|+.++++++||||++++++|.+.+. ..+
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~-~~~ 167 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPL 167 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS----CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS-CCE
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC-CeE
Confidence 4578999999999999963 22 357888775322 12446789999999999999999999999865432 468
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+||||+++|+|.++++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 168 lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCccchheEEECCCCCEEEeeccccccccc
Confidence 99999999999999963 3456899999999999999999999998 99999999999999999999999999985532
Q ss_pred h-------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCC
Q 006019 530 A-------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDP 595 (664)
Q Consensus 530 ~-------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 595 (664)
. ...+.+||......++.++|||||||++|||+| |..||..... .+.......+..
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~--~~~~~~~~~~~~-------- 314 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQGRR-------- 314 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS--SCHHHHHHTTCC--------
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH--HHHHHHHHcCCC--------
Confidence 1 123567777777778999999999999999999 6777743221 111112222111
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCCCC
Q 006019 596 TLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGA 644 (664)
Q Consensus 596 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 644 (664)
...+..++..+.+++.+||+.||++||++.++++.|+++........
T Consensus 315 --~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 315 --LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred --CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 11122334578999999999999999999999999999987655443
No 47
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.4e-39 Score=338.36 Aligned_cols=243 Identities=17% Similarity=0.289 Sum_probs=189.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcE----EEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVE----IAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~----vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||.||+|++. ++.. ||+|.+..... ....++|.+|++++++++||||++++++|.... .
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 91 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS----PKANKEILDEAYVMASVDNPHVCRLLGICLTST---V 91 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---E
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---e
Confidence 3478999999999999964 4444 46666643221 233578999999999999999999999998754 5
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++|+||+++|+|.++++. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 92 ~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 799999999999999874 3456999999999999999999999998 9999999999999999999999999998763
Q ss_pred hh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 529 MA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 529 ~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
.. ...+.+||......++.++|||||||++|||+| |+.||..... .+........ ..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~-~~-------- 237 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKG-ER-------- 237 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTT-CC--------
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHcC-CC--------
Confidence 21 124567787777788999999999999999999 9999953321 1221111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
...+..+...+.+++.+||+.||++||+|.++++.|+.+..
T Consensus 238 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 -LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11122334568899999999999999999999999998864
No 48
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=327.88 Aligned_cols=248 Identities=21% Similarity=0.378 Sum_probs=193.4
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|++. +..||||++.. ....+.|.+|++++++++||||+++++++.+ ..++|||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e 79 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQIES-------ESERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVME 79 (307)
T ss_dssp EEEEEECCSSSEEEEEEET-TEEEEEEECSS-------TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEE
T ss_pred eeeEeecCCCceEEEEEEC-CeeEEEEEecC-------hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEE
Confidence 4578999999999999985 68899998742 1235689999999999999999999998864 3489999
Q ss_pred ecCCCChhhhhcccCC-CCCCHHHHHHHHHHHHHHHHHhhcCC-CCeEEeCcCCCCeEecCCCc-eEecccCchhhhhh-
Q 006019 454 YAPNGTLFEHIHIKES-EHLDWGMRLRIAMGMAYCLEHMHQLN-PPIAHNYLNSSAVHLTEDYA-AKLSDLSFWNEIAM- 529 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~-~~l~~~~~~~ia~~ia~gL~yLH~~~-~~ivHrDLk~~NILld~~~~-~kl~DfGla~~~~~- 529 (664)
|+++|+|.++++.... ..+++..+..++.++++||+|||+.+ ..|+||||||+|||++.++. +||+|||+++....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999974432 35789999999999999999999832 23999999999999998886 79999999876532
Q ss_pred -----hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHH
Q 006019 530 -----AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQ 604 (664)
Q Consensus 530 -----~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 604 (664)
....+.+||......++.++||||||+++|||+||+.||................... .......
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 229 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR----------PPLIKNL 229 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC----------CCCBTTC
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC----------CCccccc
Confidence 2334567888877888999999999999999999999996444333333222222111 1111223
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCCC
Q 006019 605 LETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDG 643 (664)
Q Consensus 605 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~ 643 (664)
+..+.+++.+||+.||++||++.++++.|+.+....+..
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 356889999999999999999999999999998765543
No 49
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=338.89 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=197.8
Q ss_pred hhhcccccCCCeEEEEEEEC------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc
Q 006019 373 DFSNVIGSSPIGTVYKGTLS------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF 446 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 446 (664)
.+.+.||+|+||.||+|++. ++..||||++.... ......+|.+|+.++++++|||||++++++.+..
T Consensus 74 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC----SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp EEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred EEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc----ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 34588999999999999953 46689999985321 2345567999999999999999999999998776
Q ss_pred eeEEEEEecCCCChhhhhcccC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC---ceEe
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKE-----SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY---AAKL 518 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~-----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~---~~kl 518 (664)
..++||||+++|+|.++++... ...+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++ .+||
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChhhEEEecCCCCceEEE
Confidence 5699999999999999987432 246999999999999999999999999 99999999999999554 5999
Q ss_pred cccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCC
Q 006019 519 SDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGV 586 (664)
Q Consensus 519 ~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~ 586 (664)
+|||+++..... ...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+.
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~--~~~~~~~~~i~~~~ 303 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS--KSNQEVLEFVTSGG 303 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--CCHHHHHHHHHTTC
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCC
Confidence 999999865322 224567887767778999999999999999998 9999943 33333333333221
Q ss_pred CCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 587 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 587 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
. ...+..++..+.+++.+||+.||++||++.+|++.|+.+...
T Consensus 304 ~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 304 R----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 1 111223345688999999999999999999999999988753
No 50
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.4e-38 Score=327.27 Aligned_cols=236 Identities=19% Similarity=0.302 Sum_probs=191.3
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .+++.||||++....... .+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 96 (297)
T 3fxz_A 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-----KELIINEILVMRENKNPNIVNYLDSYLVGD--ELWVVM 96 (297)
T ss_dssp CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-----HHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-----HHHHHHHHHHHhcCCCCCCCeEeEEEEECC--EEEEEE
Confidence 347899999999999995 568999999987554322 467899999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++.. ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 97 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (297)
T ss_dssp ECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred ECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence 99999999999864 35899999999999999999999998 99999999999999999999999999875532
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
....+.+||......++.++|||||||++|||+||+.||... ...+........... . ...+..
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~~~~~~~~--~------~~~~~~ 241 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE--NPLRALYLIATNGTP--E------LQNPEK 241 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHHCSC--C------CSCGGG
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCC--C------CCCccc
Confidence 233456788777778899999999999999999999999432 222222222211110 0 011233
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+.+++.+||+.||++||++.|+++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 4467889999999999999999999876
No 51
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.9e-38 Score=325.14 Aligned_cols=251 Identities=17% Similarity=0.312 Sum_probs=200.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..||+|.+....... ....+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 90 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK--EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD--CYYLVM 90 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC--HHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc--HHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC--eEEEEE
Confidence 4578999999999999964 68899999986544332 445678999999999999999999999998776 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 91 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 91 EYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp ECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 999999999998643 46999999999999999999999998 999999999999999999999999998765321
Q ss_pred --------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 531 --------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 531 --------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
...+.+||......++.++||||||+++|||+||+.||.. ....+.......... .... .....
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~--~~~~~~~~~~~~~~~--~~~~----~~~~~ 238 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG--ETAVSIAIKHIQDSV--PNVT----TDVRK 238 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCS--SCHHHHHHHHHSSCC--CCHH----HHSCT
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC--CChHHHHHHHhhccC--CCcc----hhccc
Confidence 2345577877777789999999999999999999999943 223333333332211 1100 01122
Q ss_pred HHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHhhhCCC
Q 006019 603 EQLETLGELIKSCVRADPEKRP-TMRDIAAILREITGIT 640 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~i~~~~ 640 (664)
..+..+.+++.+||+.||++|| +++++.+.|+.+....
T Consensus 239 ~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 239 DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 2345688999999999999998 9999999999987653
No 52
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=363.27 Aligned_cols=240 Identities=20% Similarity=0.290 Sum_probs=195.9
Q ss_pred ccccCCCeEEEEEEEC---CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 377 VIGSSPIGTVYKGTLS---NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 377 ~iG~G~~G~Vy~g~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
.||+|+||.||+|.+. ++..||||+++.... ....++|.+|+++|++++|||||+++++|.. + ..++|||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~--~~~lv~E 415 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE----KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVME 415 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS----STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S--SEEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C--CeEEEEE
Confidence 7999999999999874 466799999865432 2245789999999999999999999999976 3 4699999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhhh--
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-- 531 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~~-- 531 (664)
||++|+|.+++.. ....+++..+..|+.+|+.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 416 ~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~--iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 416 MAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred eCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 9999999999963 3557999999999999999999999998 9999999999999999999999999998653211
Q ss_pred ----------hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 532 ----------MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 532 ----------~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
..+.+||......++.++|||||||++|||+| |+.||... ...+....+..+. ....
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--~~~~~~~~i~~~~----------~~~~ 560 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQGK----------RMEC 560 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--CSHHHHHHHHTTC----------CCCC
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHcCC----------CCCC
Confidence 23567887777788999999999999999998 99999532 2233333322221 1122
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
+..++.++.+++.+||+.||++||+|.+|++.|+.+..
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 33445679999999999999999999999999999854
No 53
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=334.26 Aligned_cols=254 Identities=20% Similarity=0.304 Sum_probs=194.5
Q ss_pred hhhcccccCCCeEEEEEEE------CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCC
Q 006019 373 DFSNVIGSSPIGTVYKGTL------SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEP 445 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 445 (664)
.+.+.||+|+||.||+|+. .++..||||.+..... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 122 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 122 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC----HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC-
Confidence 4458999999999999996 2456899999864322 12346799999999999 8999999999998876
Q ss_pred ceeEEEEEecCCCChhhhhcccCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcC
Q 006019 446 FTRMMVFEYAPNGTLFEHIHIKES---------------------EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLN 504 (664)
Q Consensus 446 ~~~~lV~Ey~~~GsL~~~l~~~~~---------------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk 504 (664)
..++||||+++|+|.+++..... ..+++..+..++.+++.||+|||+.+ |+|||||
T Consensus 123 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dik 199 (344)
T 1rjb_A 123 -PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLA 199 (344)
T ss_dssp -SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT--EEETTCS
T ss_pred -ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCC
Confidence 56999999999999999974322 34899999999999999999999998 9999999
Q ss_pred CCCeEecCCCceEecccCchhhhhhhh-----------hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCC
Q 006019 505 SSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDN 572 (664)
Q Consensus 505 ~~NILld~~~~~kl~DfGla~~~~~~~-----------~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~ 572 (664)
|+|||++.++.+||+|||+++...... ..+.+||......++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 999999999999999999997653221 23667887766778999999999999999999 999995432
Q ss_pred CChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCCCCC
Q 006019 573 GSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 645 (664)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~ 645 (664)
.. +.....+..... ...+...+..+.+++.+||+.||++||++.++++.|+.+....++...
T Consensus 280 ~~--~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~ 341 (344)
T 1rjb_A 280 VD--ANFYKLIQNGFK---------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMY 341 (344)
T ss_dssp CS--HHHHHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--------
T ss_pred cH--HHHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHHh
Confidence 22 222222222111 011222345789999999999999999999999999999887665543
No 54
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=334.16 Aligned_cols=236 Identities=19% Similarity=0.295 Sum_probs=190.0
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .+|..||||++....... ..+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 14 i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~----~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--~~~lv~ 87 (347)
T 3zgw_A 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS----DLPRIKTEIEALKNLRHQHICQLYHVLETAN--KIFMVL 87 (347)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-------CCHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch----HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--EEEEEE
Confidence 448899999999999996 578999999987543221 2346889999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 88 E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 99999999999864 346999999999999999999999998 99999999999999999999999999875432
Q ss_pred -------hhhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 530 -------AEMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
....+.+||......+ +.++|||||||++|||+||+.||. +.+..+.......+.... +
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~--~~~~~~~~~~i~~~~~~~-----------p 230 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD--DDNVMALYKKIMRGKYDV-----------P 230 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHTCCCC-----------C
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCC--CCCHHHHHHHHHcCCCCC-----------C
Confidence 1345567887766554 889999999999999999999994 334444444444432211 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1223467899999999999999999999864
No 55
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.1e-38 Score=326.57 Aligned_cols=243 Identities=22% Similarity=0.349 Sum_probs=187.3
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhc--cCCCcccceEEEEecCC--CceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSK--VNHKNFVNLIGFCEEEE--PFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~--~~~~~ 449 (664)
+.+.||+|+||.||+|+. ++..||||++... ....+..|.+++.. ++||||+++++++.... ....+
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECGG--------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred EEEeeccCCCcEEEEEEE-CCEEEEEEEeccc--------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 448899999999999998 6889999998532 23456677777766 79999999999976432 22578
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCeEEeCcCCCCeEecCCCceEeccc
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH--------QLNPPIAHNYLNSSAVHLTEDYAAKLSDL 521 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH--------~~~~~ivHrDLk~~NILld~~~~~kl~Df 521 (664)
+||||+++|+|.++++ ...+++..+.+|+.+++.||+||| +.+ |+||||||+|||++.++.+||+||
T Consensus 83 lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA--IAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE--EECSCCCGGGEEECTTSCEEECCC
T ss_pred EehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC--eecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999995 346999999999999999999999 767 999999999999999999999999
Q ss_pred Cchhhhhh-------------hhhhcccccccCCC------CCCcCCcchhhHHHHHHHHhC----------CCCccCCC
Q 006019 522 SFWNEIAM-------------AEMAATSKKLSSAP------SASLESNVYNFGVLLFEMVTG----------RLPYLVDN 572 (664)
Q Consensus 522 Gla~~~~~-------------~~~~~~~pe~~~~~------~~s~ksDVySfGvvl~El~tG----------~~P~~~~~ 572 (664)
|+++.... ....+.+||..... .++.++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 99865422 22345677766554 345789999999999999999 78874321
Q ss_pred ---CChHHHHHHHhcCCCCCccccCCCCC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 006019 573 ---GSLEDWAADYLSGVQPLQQFVDPTLS--SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 636 (664)
Q Consensus 573 ---~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i 636 (664)
............. . ..+... ..+...+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSFEDMRKVVCVD-Q-----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCHHHHHHHHTTS-C-----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcchhhhhHHHhcc-C-----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1222222211111 1 111111 12345678899999999999999999999999999986
No 56
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=8.3e-39 Score=334.61 Aligned_cols=252 Identities=19% Similarity=0.316 Sum_probs=188.7
Q ss_pred hhhcccccCCCeEEEEEEECCC----cEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc--
Q 006019 373 DFSNVIGSSPIGTVYKGTLSNG----VEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF-- 446 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~~----~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-- 446 (664)
.+.+.||+|+||.||+|+.... ..||||.+...... ....++|.+|++++++++||||+++++++...+..
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA---SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC---HHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 3458999999999999996543 27999988654322 23457899999999999999999999999765521
Q ss_pred --eeEEEEEecCCCChhhhhccc----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecc
Q 006019 447 --TRMMVFEYAPNGTLFEHIHIK----ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSD 520 (664)
Q Consensus 447 --~~~lV~Ey~~~GsL~~~l~~~----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~D 520 (664)
..++||||+++|+|.+++... ....+++..+.+|+.+++.||+|||+.+ |+||||||+|||+++++.+||+|
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC--cccCCCCcceEEEcCCCCEEEee
Confidence 138999999999999998533 2235899999999999999999999998 99999999999999999999999
Q ss_pred cCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCC
Q 006019 521 LSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQP 588 (664)
Q Consensus 521 fGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~ 588 (664)
||+++..... ...+.+||......++.++|||||||++|||+| |+.||.... ..+.........
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~~~~-- 256 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE--NAEIYNYLIGGN-- 256 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTC--
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC--hHHHHHHHhcCC--
Confidence 9999765322 123556777666778999999999999999999 999994322 222222222221
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 589 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 589 ~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
....+...+..+.+++.+||+.||++||++.++++.|++++....
T Consensus 257 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 257 --------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp --------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred --------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 111122334578999999999999999999999999999986533
No 57
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.7e-39 Score=331.38 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=202.2
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEEECC-CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC
Q 006019 366 ELEAACEDFSNVIGSSPIGTVYKGTLSN-GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE 444 (664)
Q Consensus 366 el~~~~~~~~~~iG~G~~G~Vy~g~~~~-~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 444 (664)
++......+.+.||+|+||.||+|+... +..||+|.+.... ...+.|.+|++++++++||||+++++++.+.+
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 82 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS------THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH------HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 3333334455899999999999999764 7889999985322 23567999999999999999999999998776
Q ss_pred CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCch
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW 524 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla 524 (664)
..++||||+++|+|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 83 --~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~l~Dfg~~ 158 (288)
T 3kfa_A 83 --PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLVGENHLVKVADFGLS 158 (288)
T ss_dssp --SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT--CCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred --CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC--ccCCCCCcceEEEcCCCCEEEccCccc
Confidence 6799999999999999997666677999999999999999999999998 999999999999999999999999998
Q ss_pred hhhhhh----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCcccc
Q 006019 525 NEIAMA----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFV 593 (664)
Q Consensus 525 ~~~~~~----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (664)
+..... ...+.+||......++.++||||||+++|||+| |+.||.... ..+......... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--~~~~~~~~~~~~-~----- 230 (288)
T 3kfa_A 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDY-R----- 230 (288)
T ss_dssp GTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTC-C-----
T ss_pred eeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhccC-C-----
Confidence 765321 123567787766778999999999999999999 999985322 222222221110 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 594 DPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 594 d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
...+...+..+.+++.+||+.||++||++.++++.|+.+..
T Consensus 231 ----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 231 ----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 11122334578999999999999999999999999998865
No 58
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.2e-38 Score=326.64 Aligned_cols=244 Identities=19% Similarity=0.318 Sum_probs=187.7
Q ss_pred hhhcccccCCCeEEEEEEECC----CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 373 DFSNVIGSSPIGTVYKGTLSN----GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~----~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
.+.+.||+|+||.||+|+... +..||+|.+.... .....+.|.+|+.++++++||||+++++++.+. ..
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~ 90 (281)
T 1mp8_A 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---PV 90 (281)
T ss_dssp EEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS---SC
T ss_pred EEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCccceEEEEEccC---cc
Confidence 355889999999999999743 4568888775321 234567899999999999999999999998543 45
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+++|+|.+++... ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eecccccHHHEEECCCCCEEECccccccccC
Confidence 8999999999999998643 456999999999999999999999998 9999999999999999999999999987653
Q ss_pred hhh----------hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 529 MAE----------MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 529 ~~~----------~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
... ..+.+||......++.++||||||+++|||+| |+.||.... ..+......... .
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~--~~~~~~~i~~~~----------~ 235 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENGE----------R 235 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTC----------C
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC--HHHHHHHHHcCC----------C
Confidence 221 24567777766778999999999999999997 999995322 222222222211 1
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
...+...+..+.+++.+||+.||++||++.++++.|+++.+
T Consensus 236 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 236 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11223344678899999999999999999999999999864
No 59
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.7e-38 Score=327.02 Aligned_cols=249 Identities=24% Similarity=0.446 Sum_probs=188.9
Q ss_pred hhhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
..+.+.||+|+||.||+|+..+ .+|+|++..... .....+.|.+|++++++++||||+++++++... ..++|
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~lv 97 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAP---TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP---QLAIV 97 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---SCEEE
T ss_pred eeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCC---CHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC---ccEEE
Confidence 3455889999999999998643 599998865432 234557899999999999999999999987543 45899
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|||+++|+|.++++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~--i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 174 (289)
T 3og7_A 98 TQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174 (289)
T ss_dssp EECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred EEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECCCCCEEEccceecccccccc
Confidence 999999999999863 3456999999999999999999999998 99999999999999999999999999875532
Q ss_pred ---------hhhhcccccccC---CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 530 ---------AEMAATSKKLSS---APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 530 ---------~~~~~~~pe~~~---~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
....+.+||... ...++.++||||||+++|||+||+.||.... ............ . ..+..
T Consensus 175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~-~-----~~~~~ 247 (289)
T 3og7_A 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRG-S-----LSPDL 247 (289)
T ss_dssp ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC-CHHHHHHHHHHT-S-----CCCCT
T ss_pred ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc-hHHHHHHHhccc-c-----cCcch
Confidence 122345677654 5567889999999999999999999995322 222222222221 1 11122
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
......++..+.+++.+||+.||++||++.++++.|+++.+
T Consensus 248 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 22233445679999999999999999999999999999864
No 60
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.2e-38 Score=319.69 Aligned_cols=242 Identities=22% Similarity=0.348 Sum_probs=198.3
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|+..++..||+|.+..... ..+++.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 83 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--PICLVTE 83 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SCEEEEC
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--CeEEEEe
Confidence 4578999999999999998889999999864332 2367999999999999999999999998876 5699999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA--- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~--- 530 (664)
|+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 84 FMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CCTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 9999999999864 3456899999999999999999999998 999999999999999999999999998765321
Q ss_pred -------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 531 -------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 531 -------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
...+.+||......++.++||||||+++|||+| |+.||.. ....+.......+... ..+.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--~~~~~~~~~i~~~~~~----------~~~~ 228 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--RSNSEVVEDISTGFRL----------YKPR 228 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHTTCCC----------CCCT
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC--CCHHHHHHHHhcCCcC----------CCCc
Confidence 123566777666678899999999999999999 8999843 3333433333322110 0111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
..+..+.+++.+||+.||++||++.++++.|+++.+
T Consensus 229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 223568899999999999999999999999999875
No 61
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.1e-38 Score=357.79 Aligned_cols=240 Identities=22% Similarity=0.302 Sum_probs=195.7
Q ss_pred cccccCCCeEEEEEEEC---CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLS---NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.||+|+||.||+|.+. .+..||||+++..... ....++|.+|+++|++++|||||+++++|... ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND---PALKDELLAEANVMQQLDNPYIVRMIGICEAE---SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC---GGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CEEEEE
Confidence 47999999999999763 4678999998654322 23457899999999999999999999999653 468999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
|||++|+|.++++. ...+++..+..|+.+|+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 449 E~~~~g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~--iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 449 EMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp ECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred EccCCCCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCC--EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999999999963 456999999999999999999999998 999999999999999999999999999866321
Q ss_pred ----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 531 ----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 531 ----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+. ...
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~--~~~~~~~~~i~~~~----------~~~ 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG--MKGSEVTAMLEKGE----------RMG 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT--CCHHHHHHHHHTTC----------CCC
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHcCC----------CCC
Confidence 123567887777788999999999999999999 9999943 23333333322221 111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhh
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREIT 637 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~ 637 (664)
.+..++.++.+++.+||+.||++||++.+|++.|+++.
T Consensus 593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 23334567999999999999999999999999999875
No 62
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4.9e-39 Score=342.31 Aligned_cols=258 Identities=13% Similarity=0.152 Sum_probs=192.2
Q ss_pred hhcccccCCCeEEEEEEECC------CcEEEEEEeeecccCCCc------hhHHHHHHHHHHHHhccCCCcccceEEEEe
Q 006019 374 FSNVIGSSPIGTVYKGTLSN------GVEIAVASVSVASAKDWP------KNLEVQFRKKIDTLSKVNHKNFVNLIGFCE 441 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~------~~~vavk~~~~~~~~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 441 (664)
+.+.||+|+||.||+|.+.. ++.||||++......... ......+..|+..++.++||||+++++++.
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 118 (364)
T 3op5_A 39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL 118 (364)
T ss_dssp EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEE
T ss_pred EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeee
Confidence 45889999999999999765 478999988643210000 000123455666778889999999999987
Q ss_pred cCCC--ceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec--CCCceE
Q 006019 442 EEEP--FTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT--EDYAAK 517 (664)
Q Consensus 442 ~~~~--~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld--~~~~~k 517 (664)
.... ...++||||+ +|+|.+++.. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||++ .++.+|
T Consensus 119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~--iiHrDlkp~Nill~~~~~~~~k 194 (364)
T 3op5_A 119 HDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE--YVHGDIKASNLLLNYKNPDQVY 194 (364)
T ss_dssp EEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEESSCTTCEE
T ss_pred eccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eEEecCCHHHEEEecCCCCeEE
Confidence 6421 2479999999 9999999864 3467999999999999999999999998 99999999999999 889999
Q ss_pred ecccCchhhhhh----------------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHH--HH
Q 006019 518 LSDLSFWNEIAM----------------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLED--WA 579 (664)
Q Consensus 518 l~DfGla~~~~~----------------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~--~~ 579 (664)
|+|||+++.... ....+.+||......++.++|||||||++|||+||+.||......... +.
T Consensus 195 l~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~ 274 (364)
T 3op5_A 195 LVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDS 274 (364)
T ss_dssp ECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHH
T ss_pred EEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHH
Confidence 999999976532 223456788777778899999999999999999999999643222211 11
Q ss_pred HHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 580 ADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 580 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
..... ..+..+.++.+. ....+.++.+++..||+.+|++||++.+|++.|+++...
T Consensus 275 ~~~~~--~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 275 KIRYR--ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHH--HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhh--hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11111 112222222211 012235689999999999999999999999999998753
No 63
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.8e-38 Score=337.09 Aligned_cols=248 Identities=19% Similarity=0.300 Sum_probs=195.8
Q ss_pred hhcccccCCCeEEEEEEE------CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCc
Q 006019 374 FSNVIGSSPIGTVYKGTL------SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPF 446 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 446 (664)
+.+.||+|+||.||+|++ .+++.||||++.... .....+.|.+|+++++++ +|||||+++++|.+.+.
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~- 100 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG- 100 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcC----CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC-
Confidence 448999999999999984 245789999986332 233456799999999999 79999999999987553
Q ss_pred eeEEEEEecCCCChhhhhcccCC---------------------------------------------------------
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKES--------------------------------------------------------- 469 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~~--------------------------------------------------------- 469 (664)
..++||||+++|+|.++++....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 36899999999999999874321
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh-----------h
Q 006019 470 -------EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-----------E 531 (664)
Q Consensus 470 -------~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-----------~ 531 (664)
..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 258 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence 12899999999999999999999998 999999999999999999999999999755221 1
Q ss_pred hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHH
Q 006019 532 MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGE 610 (664)
Q Consensus 532 ~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~ 610 (664)
..+.+||......++.++|||||||++|||+| |+.||...... +.....+..... ...+.....++.+
T Consensus 259 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~l~~ 327 (359)
T 3vhe_A 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTR---------MRAPDYTTPEMYQ 327 (359)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--HHHHHHHHHTCC---------CCCCTTCCHHHHH
T ss_pred ceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh--HHHHHHHHcCCC---------CCCCCCCCHHHHH
Confidence 23567887777778999999999999999999 99999543322 112122211111 0112223356889
Q ss_pred HHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 611 LIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 611 l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
++.+||+.||++||++.|+++.|+++.+.
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999998753
No 64
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=324.13 Aligned_cols=259 Identities=18% Similarity=0.253 Sum_probs=201.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++........++||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 4578999999999999976 4899999998643322 2246788999999999999999999999876544679999
Q ss_pred EecCCCChhhhhcccC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe----cCCCceEecccCchhhh
Q 006019 453 EYAPNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL----TEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl----d~~~~~kl~DfGla~~~ 527 (664)
||+++|+|.+++.... ...+++..+..|+.+++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 9999999999997532 234999999999999999999999998 9999999999999 88889999999999765
Q ss_pred hhh--------hhhcccccccC--------CCCCCcCCcchhhHHHHHHHHhCCCCccCCC--CChHHHHHHHhcCCC--
Q 006019 528 AMA--------EMAATSKKLSS--------APSASLESNVYNFGVLLFEMVTGRLPYLVDN--GSLEDWAADYLSGVQ-- 587 (664)
Q Consensus 528 ~~~--------~~~~~~pe~~~--------~~~~s~ksDVySfGvvl~El~tG~~P~~~~~--~~~~~~~~~~~~~~~-- 587 (664)
... ...+.+||... ...++.++|||||||++|||+||+.||.... ....+.......+..
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~ 246 (319)
T 4euu_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246 (319)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTT
T ss_pred CCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcc
Confidence 322 23455677543 4678899999999999999999999996322 222333333332211
Q ss_pred CCccc---c------C---CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 588 PLQQF---V------D---PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 588 ~~~~~---~------d---~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
....+ . . +............+.+++.+||+.||++||+++|+++...+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 00000 0 0 11123456778889999999999999999999999999887654
No 65
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.1e-38 Score=327.71 Aligned_cols=256 Identities=20% Similarity=0.274 Sum_probs=196.6
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc--eeEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF--TRMM 450 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~--~~~l 450 (664)
+.+.||+|+||.||+|+. .+++.||||++....... ......|.+|++++++++||||+++++++...... ..++
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS--HHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC--HHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 458899999999999996 578999999987543322 34456799999999999999999999998764421 3489
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 530 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~ 530 (664)
||||+++|+|.++++.. ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp EEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 99999999999998643 46899999999999999999999998 999999999999999999999999998765321
Q ss_pred ------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 531 ------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 531 ------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
...+.+||......++.++|||||||++|||+||+.||.. ....+................
T Consensus 170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~--~~~~~~~~~~~~~~~~~~~~~----- 242 (311)
T 3ork_A 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG--DSPVSVAYQHVREDPIPPSAR----- 242 (311)
T ss_dssp ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHCCCCCHHHH-----
T ss_pred ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC--CChHHHHHHHhcCCCCCcccc-----
Confidence 2345678877777889999999999999999999999943 333333333333211111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHhhhCCCCCCC
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPT-MRDIAAILREITGITPDGA 644 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~ev~~~L~~i~~~~~~~~ 644 (664)
....+.++.+++.+||+.||++||+ ++++...|..+....++..
T Consensus 243 --~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~ 287 (311)
T 3ork_A 243 --HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEA 287 (311)
T ss_dssp --STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSS
T ss_pred --cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCC
Confidence 1112356889999999999999995 5556677777766555443
No 66
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.6e-38 Score=325.20 Aligned_cols=247 Identities=22% Similarity=0.368 Sum_probs=197.4
Q ss_pred hhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
.+.+.||+|+||.||+|+..++..||+|.+..... ..+.|.+|++++++++||||+++++++.+. ..++||
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~v~ 86 (279)
T 1qpc_A 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQE---PIYIIT 86 (279)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS---SCEEEE
T ss_pred hheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc------cHHHHHHHHHHHHhCCCcCcceEEEEEcCC---CcEEEE
Confidence 34588999999999999998888999998864321 246799999999999999999999998753 458999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.+++.......+++..+..++.+++.||+|||+.+ ++||||||+||++++++.+||+|||+++.....
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 9999999999986443346999999999999999999999998 999999999999999999999999998765321
Q ss_pred --------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 531 --------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 531 --------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
...+.+||......++.++||||||+++|||+| |+.||.. ....+.......... ...+
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~--~~~~~~~~~~~~~~~----------~~~~ 232 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG--MTNPEVIQNLERGYR----------MVRP 232 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT--CCHHHHHHHHHTTCC----------CCCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc--cCHHHHHHHHhcccC----------CCCc
Confidence 123556776655667889999999999999999 9999843 233333333322211 0112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCC
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 642 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 642 (664)
...+..+.+++.+||+.||++||++.++++.|+++......
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 23345789999999999999999999999999999765443
No 67
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.6e-38 Score=330.81 Aligned_cols=245 Identities=22% Similarity=0.344 Sum_probs=195.6
Q ss_pred hhcccccCCCeEEEEEEE------CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 374 FSNVIGSSPIGTVYKGTL------SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
+.+.||+|+||.||+|+. .++..||||++.... .....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~ 100 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA----SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--P 100 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--S
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC----CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--c
Confidence 458899999999999986 245789999886322 2344578999999999999999999999998876 5
Q ss_pred eEEEEEecCCCChhhhhcccCC----------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCC
Q 006019 448 RMMVFEYAPNGTLFEHIHIKES----------------------EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNS 505 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~----------------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~ 505 (664)
.++||||+++|+|.+++..... ..+++..+.+++.+++.||+|||+.+ |+||||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp 178 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAA 178 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT--EECCCCSG
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC--Ccccccch
Confidence 6999999999999999874322 34899999999999999999999998 99999999
Q ss_pred CCeEecCCCceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCC
Q 006019 506 SAVHLTEDYAAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNG 573 (664)
Q Consensus 506 ~NILld~~~~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~ 573 (664)
+||++++++.+||+|||+++..... ...+.+||......++.++||||||+++|||+| |+.||....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~- 257 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP- 257 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 9999999999999999998755321 123556776666667899999999999999999 999995322
Q ss_pred ChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 574 SLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
..+........ . ....+...+..+.+++.+||+.||++||++.++++.|+++..
T Consensus 258 -~~~~~~~~~~~-~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 258 -PERLFNLLKTG-H---------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp -GGGHHHHHHTT-C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHhhcC-C---------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22222222211 1 011122334578999999999999999999999999999865
No 68
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.2e-38 Score=333.15 Aligned_cols=251 Identities=21% Similarity=0.346 Sum_probs=198.7
Q ss_pred hhhhcccccCCCeEEEEEEEC--------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEec
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS--------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEE 442 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~--------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~ 442 (664)
..+.+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|+++++++ +||||+++++++..
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC----cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 345589999999999999863 46789999886332 234457799999999999 89999999999988
Q ss_pred CCCceeEEEEEecCCCChhhhhcccC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCe
Q 006019 443 EEPFTRMMVFEYAPNGTLFEHIHIKE--------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAV 508 (664)
Q Consensus 443 ~~~~~~~lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NI 508 (664)
.+ ..++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ |+||||||+||
T Consensus 113 ~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NI 188 (334)
T 2pvf_A 113 DG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNV 188 (334)
T ss_dssp SS--CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGE
T ss_pred CC--ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCccceE
Confidence 76 6699999999999999987432 134899999999999999999999998 99999999999
Q ss_pred EecCCCceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChH
Q 006019 509 HLTEDYAAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLE 576 (664)
Q Consensus 509 Lld~~~~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~ 576 (664)
+++.++.+||+|||+++..... ...+.+||......++.++||||||+++|||+| |+.||.. ....
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~--~~~~ 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--IPVE 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT--CCHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc--CCHH
Confidence 9999999999999998755321 123556776666667899999999999999999 9999943 3333
Q ss_pred HHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCC
Q 006019 577 DWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 642 (664)
Q Consensus 577 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 642 (664)
+.......... ...+..+...+.+++.+||+.||++||++.++++.|+++....+.
T Consensus 267 ~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 267 ELFKLLKEGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHHHHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcCCC----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 43333322211 011222345689999999999999999999999999999876443
No 69
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.3e-38 Score=318.73 Aligned_cols=245 Identities=24% Similarity=0.362 Sum_probs=185.8
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|+.. +..+|||++........ ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 11 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 86 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDI-SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP--NLCLVME 86 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC----CEEEEE
T ss_pred eeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccH-HHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC--ceEEEEE
Confidence 4588999999999999975 78999999865433221 223467999999999999999999999998776 6699999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CeEEeCcCCCCeEecC--------CCceEecccCch
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNP-PIAHNYLNSSAVHLTE--------DYAAKLSDLSFW 524 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~-~ivHrDLk~~NILld~--------~~~~kl~DfGla 524 (664)
|+++|+|.+++. ...+++..+..++.+++.||+|||+.+. +|+||||||+|||++. ++.+||+|||++
T Consensus 87 ~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 87 FARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp CCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred cCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 999999999985 3468999999999999999999998773 4899999999999996 678999999998
Q ss_pred hhhhhh-------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 525 NEIAMA-------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 525 ~~~~~~-------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
+..... ...+.+||......++.++||||||+++|||+||+.||... ...............
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~--------- 232 (271)
T 3dtc_A 164 REWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--DGLAVAYGVAMNKLA--------- 232 (271)
T ss_dssp ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS--CHHHHHHHHHTSCCC---------
T ss_pred cccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHhhhcCCCC---------
Confidence 765322 23455777776777899999999999999999999999432 222222222221110
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREI 636 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i 636 (664)
...+..++..+.+++.+||+.||++||++.|+++.|+++
T Consensus 233 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111223345789999999999999999999999999864
No 70
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.3e-38 Score=329.46 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=199.3
Q ss_pred hhhhcccccCCCeEEEEEEE------CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCC
Q 006019 372 EDFSNVIGSSPIGTVYKGTL------SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEE 444 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 444 (664)
..+.+.||+|+||.||+|+. .++..||||.+.... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch----hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 34558999999999999985 346789999986432 123457899999999999 9999999999998877
Q ss_pred CceeEEEEEecCCCChhhhhcccCC----------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCe
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIKES----------------EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAV 508 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~~~----------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NI 508 (664)
..++||||+++|+|.+++..... ..+++..+.+++.+++.||+|||+.+ |+||||||+||
T Consensus 101 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Ni 176 (313)
T 1t46_A 101 --PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNI 176 (313)
T ss_dssp --SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGE
T ss_pred --CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCccceE
Confidence 56999999999999999875432 25899999999999999999999998 99999999999
Q ss_pred EecCCCceEecccCchhhhhhhh-----------hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChH
Q 006019 509 HLTEDYAAKLSDLSFWNEIAMAE-----------MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLE 576 (664)
Q Consensus 509 Lld~~~~~kl~DfGla~~~~~~~-----------~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~ 576 (664)
+++.++.+||+|||+++...... ..+.+||......++.++||||||+++|||+| |+.||......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 254 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-- 254 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS--
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch--
Confidence 99999999999999987664221 23567777666778999999999999999999 99999533222
Q ss_pred HHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 577 DWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 577 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
+.......... .. ..+...+..+.+++.+||+.||++||++.|+++.|+++....+
T Consensus 255 ~~~~~~~~~~~--~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 255 SKFYKMIKEGF--RM-------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp HHHHHHHHHTC--CC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred hHHHHHhccCC--CC-------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 11222221110 00 0112233568999999999999999999999999999876443
No 71
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-37 Score=329.83 Aligned_cols=247 Identities=19% Similarity=0.242 Sum_probs=193.7
Q ss_pred HhhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 371 CEDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 371 ~~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
.+.+.+.||+|+||.||+|+.. +++.||||++.............+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~ 102 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--MLY 102 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 3455689999999999999964 6899999998754322111123567999999999999999999999998877 779
Q ss_pred EEEEecCCCChhhhhccc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc---eEecccCch
Q 006019 450 MVFEYAPNGTLFEHIHIK--ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA---AKLSDLSFW 524 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~---~kl~DfGla 524 (664)
+||||+++|+|.+++... ....+++..+..++.+++.||+|||+++ |+||||||+|||++.++. +||+|||++
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999998887533 3446899999999999999999999998 999999999999987654 999999998
Q ss_pred hhhhh---------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCC
Q 006019 525 NEIAM---------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDP 595 (664)
Q Consensus 525 ~~~~~---------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 595 (664)
+.... ....+.+||......++.++|||||||++|||+||+.||... ..+................
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~i~~~~~~~~~~~-- 255 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---KERLFEGIIKGKYKMNPRQ-- 255 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---HHHHHHHHHHTCCCCCHHH--
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---HHHHHHHHHcCCCCCCccc--
Confidence 76532 234566788877778899999999999999999999999532 2233333332211111000
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 596 TLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 596 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
. ...+.++.+++.+||+.||++||++.|+++
T Consensus 256 -~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 256 -W----SHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -H----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -c----ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 112356889999999999999999999975
No 72
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.3e-37 Score=328.33 Aligned_cols=244 Identities=18% Similarity=0.272 Sum_probs=195.0
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCC-chhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDW-PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
.+.+.||+|+||.||+|+.. +|..+|+|.+........ .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 15 ~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~l 92 (361)
T 2yab_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT--DVVL 92 (361)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred EEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--EEEE
Confidence 34588999999999999975 589999999976543321 1123467999999999999999999999998876 7799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC----ceEecccCchhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY----AAKLSDLSFWNE 526 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~----~~kl~DfGla~~ 526 (664)
||||+++|+|.+++. ....+++..+..++.+|+.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 999999999999986 3457999999999999999999999998 99999999999999877 799999999876
Q ss_pred hhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 527 IAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 527 ~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
... ....+.+||......++.++|||||||++|||++|+.||.. ....+....+...........
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~--~~~~~~~~~i~~~~~~~~~~~----- 241 (361)
T 2yab_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--DTKQETLANITAVSYDFDEEF----- 241 (361)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC--SSHHHHHHHHHTTCCCCCHHH-----
T ss_pred cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhcCCCCCchh-----
Confidence 532 23346678887777889999999999999999999999943 233344433333211111000
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.......+.+++.+||+.||++||++.|+++
T Consensus 242 --~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 242 --FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0112356889999999999999999999874
No 73
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=323.74 Aligned_cols=245 Identities=19% Similarity=0.292 Sum_probs=194.5
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCC-chhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDW-PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.+.||+|+||.||+|+.. +|..||+|.+........ .....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~ 90 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVI 90 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEE
Confidence 345689999999999999975 589999999876543221 1123567999999999999999999999998876 779
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC----ceEecccCchh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY----AAKLSDLSFWN 525 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~----~~kl~DfGla~ 525 (664)
+||||+++|+|.+++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC--eEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999986 3456999999999999999999999998 99999999999999887 89999999987
Q ss_pred hhhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 526 EIAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 526 ~~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
.... ....+.+||......++.++|||||||++|||+||+.||... ...+...............
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~~~~~~~~~~~~----- 239 (326)
T 2y0a_A 167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD--TKQETLANVSAVNYEFEDE----- 239 (326)
T ss_dssp ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS--SHHHHHHHHHHTCCCCCHH-----
T ss_pred ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC--CHHHHHHHHHhcCCCcCcc-----
Confidence 6532 223456788877778899999999999999999999999432 2333333222221111100
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 240 --~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 240 --YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp --HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00112356889999999999999999999986
No 74
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.8e-37 Score=321.07 Aligned_cols=254 Identities=22% Similarity=0.337 Sum_probs=196.3
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|.. .+|..||+|++......+ .....++.+|++++++++||||+++++++...+ ..++||
T Consensus 36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 111 (310)
T 2wqm_A 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD--AKARADCIKEIDLLKQLNHPNVIKYYASFIEDN--ELNIVL 111 (310)
T ss_dssp EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--cEEEEE
Confidence 458899999999999996 478999999986533222 345678999999999999999999999999877 679999
Q ss_pred EecCCCChhhhhcc--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh
Q 006019 453 EYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~ 530 (664)
||+++|+|.+++.. .....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 99999999998863 23566899999999999999999999998 999999999999999999999999998765321
Q ss_pred ---------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 531 ---------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 531 ---------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
...+.+||......++.++||||||+++|||+||+.||........++........ ..... .
T Consensus 190 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~-------~ 260 (310)
T 2wqm_A 190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLP-------S 260 (310)
T ss_dssp ---------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC--SCCCC-------T
T ss_pred CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc--CCCCc-------c
Confidence 22355778777778899999999999999999999999655444444444333221 11110 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCC
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 642 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 642 (664)
...+.++.+++.+||+.||++||++.+|++.|+++....++
T Consensus 261 ~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 261 DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 12235688999999999999999999999999999765443
No 75
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=324.92 Aligned_cols=238 Identities=15% Similarity=0.226 Sum_probs=192.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..+|+|.+.... .....+.+|+++++.++||||+++++++.+.+ ..++||
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~ 80 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG------TDQVLVKKEISILNIARHRNILHLHESFESME--ELVMIF 80 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc------ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--EEEEEE
Confidence 4578999999999999975 58899999886321 23467899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC--CCceEecccCchhhhhhh
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE--DYAAKLSDLSFWNEIAMA 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~--~~~~kl~DfGla~~~~~~ 530 (664)
||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g--ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 81 EFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN--IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred EeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 99999999999863 3346999999999999999999999998 999999999999997 789999999998765322
Q ss_pred --------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 531 --------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 531 --------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
...+.+||......++.++|||||||++|||+||+.||.. ....+................ ..
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~~~~-------~~ 228 (321)
T 1tki_A 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA--ETNQQIIENIMNAEYTFDEEA-------FK 228 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHHTCCCCCHHH-------HT
T ss_pred CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC--CCHHHHHHHHHcCCCCCChhh-------hc
Confidence 2345678877777789999999999999999999999943 333444444443321111100 01
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+.++.+++.+||+.||++|||+.|+++
T Consensus 229 ~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 229 EISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12356889999999999999999999987
No 76
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.7e-39 Score=334.60 Aligned_cols=243 Identities=19% Similarity=0.297 Sum_probs=189.0
Q ss_pred hhcccccCCCeEEEEEEEC-CCcE----EEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVE----IAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~----vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||.||+|++. ++.. |++|.+...... ...+.+.+|+.++++++||||+++++++.+. ..
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~ 89 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR----QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS---SL 89 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC----SCBCSCCHHHHHHHTCCCTTBCCEEEEECBS---SE
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH----HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---cc
Confidence 3478999999999999964 4444 666666433211 1224578899999999999999999999643 46
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++|+||+++|+|.+++... ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT--CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC--CCCCccchheEEECCCCeEEECCCCcccccC
Confidence 8999999999999998632 457899999999999999999999998 9999999999999999999999999998653
Q ss_pred hh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 529 MA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 529 ~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
.. ...+.+||......++.++|||||||++|||+| |+.||..... .+........ ... .
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~-~~~---~--- 237 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKG-ERL---A--- 237 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHHTT-CBC---C---
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHHcC-CCC---C---
Confidence 21 124566777766778999999999999999999 9999953322 2222222221 110 0
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
.+..+...+.+++.+||+.||++||++.++++.|+.+..
T Consensus 238 ---~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 238 ---QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111122347789999999999999999999999999864
No 77
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-37 Score=325.29 Aligned_cols=245 Identities=21% Similarity=0.360 Sum_probs=194.1
Q ss_pred hhcccccCCCeEEEEEEECC-----CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTLSN-----GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~-----~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||.||+|+... +..||||.+.... ......+|.+|++++++++||||+++++++...+ ..
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~ 121 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY----TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK--PM 121 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--SE
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--Cc
Confidence 34789999999999998643 2358999885322 2344567999999999999999999999998776 67
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 122 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 122 MIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 999999999999999864 3457999999999999999999999998 9999999999999999999999999988653
Q ss_pred hh------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCC
Q 006019 529 MA------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDP 595 (664)
Q Consensus 529 ~~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 595 (664)
.. ...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+..
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~--~~~~~~~~~~~~~~~-------- 268 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE--LSNHEVMKAINDGFR-------- 268 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHTTCC--------
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc--CCHHHHHHHHHCCCc--------
Confidence 21 123667887777788999999999999999999 9999943 233333333322211
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 596 TLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 596 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
...+..++..+.+++.+||+.||++||++.++++.|+++...
T Consensus 269 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 269 --LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp --CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011223345789999999999999999999999999998754
No 78
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.6e-38 Score=325.71 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=187.7
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|+..+|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~e 99 (311)
T 3niz_A 25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED---EGIPSTAIREISLLKELHHPNIVSLIDVIHSER--CLTLVFE 99 (311)
T ss_dssp EEEEEEECSSCEEEEEEETTSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS--CEEEEEE
T ss_pred hhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc---chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC--EEEEEEc
Confidence 34789999999999999988999999998654322 234567899999999999999999999998776 6799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh----
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---- 529 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~---- 529 (664)
|+++ +|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 100 FMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR--ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp CCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 9984 88888763 3456999999999999999999999998 99999999999999999999999999876531
Q ss_pred -----hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCC-ChHHHHHHHhcCCCC--Cccc------cC
Q 006019 530 -----AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNG-SLEDWAADYLSGVQP--LQQF------VD 594 (664)
Q Consensus 530 -----~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~-~~~~~~~~~~~~~~~--~~~~------~d 594 (664)
....+.+||.... ..++.++|||||||++|||+||+.||..... .....+......... .... .+
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence 1234567776654 5689999999999999999999999953222 222222221111100 0000 00
Q ss_pred CCC---CC-----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 595 PTL---SS-----FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 595 ~~~---~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
... .. ..+....++.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 00 01122356889999999999999999999886
No 79
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.9e-38 Score=326.57 Aligned_cols=239 Identities=19% Similarity=0.266 Sum_probs=187.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|+.+++.++||||+++++++.+.+ ..++||
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~ 84 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFL 84 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc----chHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEE
Confidence 3478999999999999975 6899999998654322 22356889999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 85 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 9999999999986 3456999999999999999999999999 99999999999999999999999999875421
Q ss_pred --------hhhhcccccccCCCC-CCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 530 --------AEMAATSKKLSSAPS-ASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 530 --------~~~~~~~pe~~~~~~-~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
....+.+||...... .+.++|||||||++|||+||+.||.........+.. ........ ..
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-~~~~~~~~---------~~ 230 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-WKEKKTYL---------NP 230 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH-HHTTCTTS---------TT
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-HhcccccC---------Cc
Confidence 123455677665544 377899999999999999999999644332222221 11111100 00
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.......+.+++.+||+.||++||++.|+++.
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 12233568899999999999999999998764
No 80
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=317.80 Aligned_cols=242 Identities=21% Similarity=0.258 Sum_probs=184.7
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCC---------------------chhHHHHHHHHHHHHhccCCC
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDW---------------------PKNLEVQFRKKIDTLSKVNHK 431 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~---------------------~~~~~~~f~~E~~~l~~l~H~ 431 (664)
+.+.||+|+||.||+|+.. +++.||||++........ .....+.|.+|++++++++||
T Consensus 17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 96 (298)
T 2zv2_A 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96 (298)
T ss_dssp EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence 4578999999999999964 688999999875432110 011235689999999999999
Q ss_pred cccceEEEEecCCCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec
Q 006019 432 NFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT 511 (664)
Q Consensus 432 niv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld 511 (664)
||+++++++.+......++||||+++|+|.+++. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVG 171 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEC
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEC
Confidence 9999999998743336799999999999988763 356999999999999999999999998 99999999999999
Q ss_pred CCCceEecccCchhhhhh---------hhhhcccccccCCCC---CCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHH
Q 006019 512 EDYAAKLSDLSFWNEIAM---------AEMAATSKKLSSAPS---ASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA 579 (664)
Q Consensus 512 ~~~~~kl~DfGla~~~~~---------~~~~~~~pe~~~~~~---~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~ 579 (664)
.++.+||+|||+++.... ....+.+||...... .+.++|||||||++|||+||+.||.. .....+.
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~--~~~~~~~ 249 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD--ERIMCLH 249 (298)
T ss_dssp TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHH
T ss_pred CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC--ccHHHHH
Confidence 999999999999876532 234566788765544 37789999999999999999999943 2333333
Q ss_pred HHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 580 ADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 580 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.......... +.. ...+..+.+++.+||+.||++||++.|+++
T Consensus 250 ~~~~~~~~~~-----~~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 250 SKIKSQALEF-----PDQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHCCCCC-----CSS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHhcccCCC-----CCc----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 3332221111 111 122356889999999999999999999864
No 81
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.8e-38 Score=328.40 Aligned_cols=238 Identities=16% Similarity=0.260 Sum_probs=187.3
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC-------
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP------- 445 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~------- 445 (664)
+.+.||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++|||||++++++.+...
T Consensus 10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR----ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST----TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc----hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 3488999999999999976 789999999975432 2345789999999999999999999999865432
Q ss_pred ------------------------------------------------ceeEEEEEecCCCChhhhhcccC-CCCCCHHH
Q 006019 446 ------------------------------------------------FTRMMVFEYAPNGTLFEHIHIKE-SEHLDWGM 476 (664)
Q Consensus 446 ------------------------------------------------~~~~lV~Ey~~~GsL~~~l~~~~-~~~l~~~~ 476 (664)
...++||||+++|+|.+++.... .....+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 12689999999999999987542 24567788
Q ss_pred HHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---------------------hhhhcc
Q 006019 477 RLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---------------------AEMAAT 535 (664)
Q Consensus 477 ~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~---------------------~~~~~~ 535 (664)
+.+|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.... ....+.
T Consensus 166 ~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 243 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM 243 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred HHHHHHHHHHHHHHHHhCC--eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence 9999999999999999998 99999999999999999999999999876532 233456
Q ss_pred cccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHh
Q 006019 536 SKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSC 615 (664)
Q Consensus 536 ~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~C 615 (664)
+||......++.++|||||||++|||+||..|+.. ..+....... .............+.+++.+|
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----~~~~~~~~~~----------~~~~~~~~~~~~~~~~li~~~ 309 (332)
T 3qd2_B 244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----RVRIITDVRN----------LKFPLLFTQKYPQEHMMVQDM 309 (332)
T ss_dssp CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----HHHHHHHHHT----------TCCCHHHHHHCHHHHHHHHHH
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----HHHHHHHhhc----------cCCCcccccCChhHHHHHHHH
Confidence 78877777889999999999999999999887621 1111111111 111111233445678999999
Q ss_pred ccCCCCCCCCHHHHHH
Q 006019 616 VRADPEKRPTMRDIAA 631 (664)
Q Consensus 616 l~~~P~~RPs~~ev~~ 631 (664)
|+.||++||++.|+++
T Consensus 310 l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 310 LSPSPTERPEATDIIE 325 (332)
T ss_dssp HCSSGGGSCCHHHHHH
T ss_pred ccCCCCcCCCHHHHhh
Confidence 9999999999999886
No 82
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.7e-38 Score=324.11 Aligned_cols=244 Identities=19% Similarity=0.326 Sum_probs=190.3
Q ss_pred hhhcccccCCCeEEEEEEECC-C-------cEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC
Q 006019 373 DFSNVIGSSPIGTVYKGTLSN-G-------VEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE 444 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~-~-------~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 444 (664)
.+.+.||+|+||.||+|+... + ..||+|.+.... ....+.|.+|++++++++||||+++++++...+
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-----RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp EEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-----GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred eeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 345889999999999998643 3 468999885432 234578999999999999999999999998876
Q ss_pred CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc--------e
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA--------A 516 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~--------~ 516 (664)
..++||||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++. +
T Consensus 86 --~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 --ENILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp --CCEEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred --CCEEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC--eECCCcCcceEEEecCCccccccccee
Confidence 56999999999999999964 3345899999999999999999999999 999999999999998887 9
Q ss_pred EecccCchhhhhh-----hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCc
Q 006019 517 KLSDLSFWNEIAM-----AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQ 590 (664)
Q Consensus 517 kl~DfGla~~~~~-----~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~ 590 (664)
||+|||+++.... ....+.+||.... ..++.++||||||+++|||+||..|+... ........ .........
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~-~~~~~~~~-~~~~~~~~~ 238 (289)
T 4fvq_A 161 KLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA-LDSQRKLQ-FYEDRHQLP 238 (289)
T ss_dssp EECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT-SCHHHHHH-HHHTTCCCC
T ss_pred eeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc-cchHHHHH-HhhccCCCC
Confidence 9999999876532 2334667887665 66899999999999999999965554222 12222111 111111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 591 QFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 591 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
. ....++.+++.+||+.||++||++.++++.|+++...
T Consensus 239 ~-----------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 239 A-----------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp C-----------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred C-----------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1 1123478999999999999999999999999998763
No 83
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.7e-37 Score=318.77 Aligned_cols=251 Identities=16% Similarity=0.215 Sum_probs=193.3
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||+|++......+ ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 113 (309)
T 2h34_A 38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD--PVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG--QLYVDM 113 (309)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC--HHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC--eEEEEE
Confidence 4588999999999999975 68899999986543222 344578999999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++++|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 114 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 114 RLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp ECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc--CCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 999999999998643 46899999999999999999999998 999999999999999999999999998765321
Q ss_pred --------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 531 --------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 531 --------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
...+.+||......++.++||||||+++|||+||+.||.... .......+.......... +.
T Consensus 190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~~~~-------~~ 259 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---LSVMGAHINQAIPRPSTV-------RP 259 (309)
T ss_dssp -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---HHHHHHHHHSCCCCGGGT-------ST
T ss_pred ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---HHHHHHHhccCCCCcccc-------CC
Confidence 234667888888888999999999999999999999994322 222222222211111111 12
Q ss_pred HHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHhhhCCCCC
Q 006019 603 EQLETLGELIKSCVRADPEKRP-TMRDIAAILREITGITPD 642 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~i~~~~~~ 642 (664)
..+.++.+++.+||+.||++|| +++++++.|+++......
T Consensus 260 ~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~ 300 (309)
T 2h34_A 260 GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQ 300 (309)
T ss_dssp TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----
T ss_pred CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcc
Confidence 2334688999999999999999 999999999998766443
No 84
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.8e-38 Score=327.29 Aligned_cols=252 Identities=22% Similarity=0.379 Sum_probs=191.4
Q ss_pred hhcccccCCCeEEEEEEEC----CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc---
Q 006019 374 FSNVIGSSPIGTVYKGTLS----NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF--- 446 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~----~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~--- 446 (664)
+.+.||+|+||.||+|+.. .+..||+|.+..... .....+.|.+|++++++++||||+++++++.+.+..
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 114 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS---SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP 114 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC---CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc---chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence 4578999999999999864 345799999865432 234456799999999999999999999999865421
Q ss_pred eeEEEEEecCCCChhhhhcc----cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccC
Q 006019 447 TRMMVFEYAPNGTLFEHIHI----KESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS 522 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~----~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfG 522 (664)
..++||||+++|+|.+++.. .....+++..+.+|+.+++.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCSGGGEEECTTSCEEECSCS
T ss_pred ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEEeecC
Confidence 34899999999999998843 23456999999999999999999999998 9999999999999999999999999
Q ss_pred chhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCc
Q 006019 523 FWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQ 590 (664)
Q Consensus 523 la~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 590 (664)
+++..... ...+.+||......++.++||||||+++|||+| |+.||.... ..+..........
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~~--- 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ--NHEMYDYLLHGHR--- 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTCC---
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC--HHHHHHHHHcCCC---
Confidence 98765321 123556777767778999999999999999999 889984322 2222222222211
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCC
Q 006019 591 QFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 642 (664)
Q Consensus 591 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 642 (664)
...+...+..+.+++.+||+.||++||++.++++.|+++.+..|+
T Consensus 268 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 268 -------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp -------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred -------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 111223345789999999999999999999999999999876554
No 85
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=322.20 Aligned_cols=252 Identities=20% Similarity=0.306 Sum_probs=194.3
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecC--CCceeEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEE--EPFTRMM 450 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~l 450 (664)
+.+.||+|+||.||+++. .+++.||||++.... ....+.+.+|++++++++||||+++++++... .....++
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-----QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-----HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 457899999999999996 578999999886532 33457899999999999999999999998632 2225789
Q ss_pred EEEecCCCChhhhhccc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 451 VFEYAPNGTLFEHIHIK--ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
|+||+++|+|.+++... ....+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 99999999999988642 3467999999999999999999999998 9999999999999999999999999876432
Q ss_pred h------------------hhhhcccccccCCCC---CCcCCcchhhHHHHHHHHhCCCCccC---CCCChHHHHHHHhc
Q 006019 529 M------------------AEMAATSKKLSSAPS---ASLESNVYNFGVLLFEMVTGRLPYLV---DNGSLEDWAADYLS 584 (664)
Q Consensus 529 ~------------------~~~~~~~pe~~~~~~---~s~ksDVySfGvvl~El~tG~~P~~~---~~~~~~~~~~~~~~ 584 (664)
. ....+.+||...... ++.++||||||+++|||+||+.||.. ......... .
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~ 261 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV----Q 261 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH----H
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh----h
Confidence 1 133466788765443 58899999999999999999999842 111111111 1
Q ss_pred CCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCCCCC
Q 006019 585 GVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGAI 645 (664)
Q Consensus 585 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~~ 645 (664)
.... .+ .....+..+.+++.+||+.||++||++.++++.|+.+....|....
T Consensus 262 ~~~~-----~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~~ 313 (317)
T 2buj_A 262 NQLS-----IP----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHT 313 (317)
T ss_dssp CC-------CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC---
T ss_pred ccCC-----CC----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCCC
Confidence 1000 01 1122335689999999999999999999999999999876665443
No 86
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=9.7e-38 Score=322.54 Aligned_cols=248 Identities=24% Similarity=0.351 Sum_probs=191.8
Q ss_pred hhcccccCCCeEEEEEEECC----CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLSN----GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~----~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.||+|+||.||+|+..+ ...+|+|.+.... .....+.|.+|++++++++||||++++++|.+.+. ..+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~ 103 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG-SPL 103 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCE
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCC----CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC-ceE
Confidence 45789999999999999643 2357787775321 23445789999999999999999999999765442 568
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+||||+++|+|.++++. ....+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999963 3456899999999999999999999998 99999999999999999999999999875532
Q ss_pred hh-------------hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCC
Q 006019 530 AE-------------MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDP 595 (664)
Q Consensus 530 ~~-------------~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 595 (664)
.. ..+.+||......++.++||||||+++|||+| |..||.... ..+..........
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~~~~~~~~~-------- 250 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLLQGRR-------- 250 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC--TTTHHHHHHTTCC--------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC--HHHHHHHHhcCCC--------
Confidence 11 23556776666778999999999999999999 555553222 1112222222111
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 596 TLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 596 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
...+...+..+.+++.+||+.||++||++.++++.|+++.....
T Consensus 251 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 251 --LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred --CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 01112233568999999999999999999999999999987543
No 87
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.4e-37 Score=323.98 Aligned_cols=237 Identities=17% Similarity=0.219 Sum_probs=193.3
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|+.||+|++....... ......+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~--~~~lv~ 84 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--RLCFVM 84 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--hhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC--EEEEEE
Confidence 3488999999999999975 68999999997542111 123467889999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++.. ...+++.....++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 85 EYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp ECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999999998863 346899999999999999999999998 99999999999999999999999999875321
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
....+.+||......++.++|||||||++|||+||+.||.. .+..+........... ++..
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--~~~~~~~~~i~~~~~~-----------~p~~ 227 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIR-----------FPRT 227 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCC-----------CCTT
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC--CCHHHHHHHHHcCCCC-----------CCCC
Confidence 23456788988888889999999999999999999999943 3334444443332111 1222
Q ss_pred HHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRP-----TMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 631 (664)
...++.+++.+||+.||++|| +++|+++
T Consensus 228 ~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 335688999999999999999 8988875
No 88
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5e-38 Score=330.04 Aligned_cols=237 Identities=21% Similarity=0.314 Sum_probs=189.1
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .++..||+|++....... ......+.+|+++++.++||||+++++++...+ ..++||
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~lv~ 88 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK--SDMHMRVEREISYLKLLRHPHIIKLYDVITTPT--DIVMVI 88 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc--hhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEEEE
Confidence 457899999999999996 578999999986432211 112357899999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+ +|+|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 89 E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 89 EYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp CCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred ECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 999 78999988643 46999999999999999999999998 999999999999999999999999998765322
Q ss_pred ------hhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 531 ------EMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 531 ------~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
...+.+||...+..+ +.++|||||||++|||+||+.||..... ......+.......+..
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-------------~~~~~~i~~~~~~~p~~ 230 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI-------------PNLFKKVNSCVYVMPDF 230 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS-------------TTCBCCCCSSCCCCCTT
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH-------------HHHHHHHHcCCCCCccc
Confidence 234567887766554 6899999999999999999999953221 01111111111223333
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.+..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 231 LSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 44678899999999999999999999763
No 89
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=329.39 Aligned_cols=237 Identities=18% Similarity=0.281 Sum_probs=186.6
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEEe
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEY 454 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~Ey 454 (664)
+.||+|+||.||+|+.. +|..||+|++.... ....++|.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~lv~E~ 167 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRG-----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--DIVLVMEY 167 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEEEC
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeC
Confidence 67999999999999964 68999999987532 234568999999999999999999999998877 77999999
Q ss_pred cCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe--cCCCceEecccCchhhhhhh--
Q 006019 455 APNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL--TEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 455 ~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl--d~~~~~kl~DfGla~~~~~~-- 530 (664)
+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 168 ~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 168 VDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp CTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 999999998863 3456899999999999999999999998 9999999999999 56789999999998865322
Q ss_pred ------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHH
Q 006019 531 ------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQ 604 (664)
Q Consensus 531 ------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 604 (664)
...+.+||......++.++|||||||++|||+||+.||.. ....+............. ..... ..
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~--~~~~~~~~~i~~~~~~~~---~~~~~----~~ 315 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG--DNDAETLNNILACRWDLE---DEEFQ----DI 315 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHHTCCCSC---SGGGT----TS
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhccCCCC---hhhhc----cC
Confidence 2345678877777889999999999999999999999943 233333333333211111 11111 22
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 605 LETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 605 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..++.+++.+||+.||++||++.|+++
T Consensus 316 ~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 SEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 356889999999999999999999987
No 90
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-37 Score=317.69 Aligned_cols=242 Identities=19% Similarity=0.275 Sum_probs=195.4
Q ss_pred cccccCCCeEEEEEEEC---CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLS---NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.||+|+||.||+|.+. ++..||||.+.... .....+++.+|++++++++||||+++++++.. + ..++||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~ 88 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT----EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E--ALMLVM 88 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S--SEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCcc----chhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C--CcEEEE
Confidence 48999999999999864 57889999986432 23456789999999999999999999999943 3 468999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 89 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 89 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC--EeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 99999999999863 3456999999999999999999999998 999999999999999999999999998765321
Q ss_pred ----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 531 ----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 531 ----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
...+.+||......++.++||||||+++|||+| |+.||.... ..+.......+. ...
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~~~----------~~~ 233 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGK----------RME 233 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHTTC----------CCC
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhcCC----------cCC
Confidence 133556776666667889999999999999999 999994322 233332222221 011
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
.+...+..+.+++.+||+.||++||++.++++.|+++...
T Consensus 234 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 234 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2233446799999999999999999999999999998654
No 91
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9e-38 Score=323.33 Aligned_cols=249 Identities=18% Similarity=0.256 Sum_probs=192.0
Q ss_pred hhcccccCCCeEEEEEEE-----CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTL-----SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-----~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||.||+|++ .+++.||+|++...... ...+.+.+|++++++++||||+++++++...+....
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG----NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccc----hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 457899999999999994 36889999998654322 234679999999999999999999999987643367
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+++|+|.+++... ...+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcCC--cccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999998533 356999999999999999999999998 9999999999999999999999999987653
Q ss_pred hh------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCC------------CChHHHHHHHhc
Q 006019 529 MA------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDN------------GSLEDWAADYLS 584 (664)
Q Consensus 529 ~~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~------------~~~~~~~~~~~~ 584 (664)
.. ...+.+||......++.++||||||+++|||+||+.|+.... ............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 22 122556776666667889999999999999999999863110 000001111111
Q ss_pred CCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 585 GVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 585 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
. ......+...+..+.+++.+||+.||++||++.++++.|+++++
T Consensus 258 ~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 258 E---------GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp T---------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred c---------cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 1 11112233344678999999999999999999999999998864
No 92
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4e-37 Score=324.82 Aligned_cols=246 Identities=15% Similarity=0.186 Sum_probs=189.2
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
.+.+.||+|+||.||+|+.. ++..+|+|++.............+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 29 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv 106 (345)
T 3hko_A 29 HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ--YICLV 106 (345)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC--eEEEE
Confidence 34589999999999999974 6789999998754332222344578999999999999999999999998876 67999
Q ss_pred EEecCCCChhhhhccc--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHhhc
Q 006019 452 FEYAPNGTLFEHIHIK--------------------------------------ESEHLDWGMRLRIAMGMAYCLEHMHQ 493 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~--------------------------------------~~~~l~~~~~~~ia~~ia~gL~yLH~ 493 (664)
|||+++|+|.+++... ....+++.....|+.+++.||+|||+
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 186 (345)
T 3hko_A 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186 (345)
T ss_dssp EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988521 01123567788899999999999999
Q ss_pred CCCCeEEeCcCCCCeEecCCC--ceEecccCchhhhhh-------------hhhhcccccccCC--CCCCcCCcchhhHH
Q 006019 494 LNPPIAHNYLNSSAVHLTEDY--AAKLSDLSFWNEIAM-------------AEMAATSKKLSSA--PSASLESNVYNFGV 556 (664)
Q Consensus 494 ~~~~ivHrDLk~~NILld~~~--~~kl~DfGla~~~~~-------------~~~~~~~pe~~~~--~~~s~ksDVySfGv 556 (664)
.+ |+||||||+|||++.++ .+||+|||+++.... ....+.+||.... ..++.++|||||||
T Consensus 187 ~~--ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 187 QG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp TT--EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred CC--ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 98 99999999999998776 899999999875422 1234567776643 66889999999999
Q ss_pred HHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 557 LLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 557 vl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
++|||+||+.||.. ....+............. .+. .......+.+++.+||+.||++||++.++++
T Consensus 265 il~el~~g~~pf~~--~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 265 LLHLLLMGAVPFPG--VNDADTISQVLNKKLCFE---NPN----YNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCTT---SGG----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCCCC--CChHHHHHHHHhcccccC---Ccc----cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 99999999999942 233333334333321111 111 1123356889999999999999999999976
No 93
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.6e-37 Score=327.39 Aligned_cols=243 Identities=20% Similarity=0.256 Sum_probs=194.2
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
+.+.+.||+|+||.||+|... ++..||+|++..... .....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~l 105 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL---SARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYL 105 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 345589999999999999975 589999999875432 2334567999999999999999999999998877 6799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC---ceEecccCchhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY---AAKLSDLSFWNEI 527 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~---~~kl~DfGla~~~ 527 (664)
||||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 106 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999998863 456899999999999999999999998 99999999999998654 5999999998765
Q ss_pred hhh--------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 528 AMA--------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 528 ~~~--------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
... ...+.+||......++.++|||||||++|||+||+.||.. .+..+.......+..... .+.
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~--~~~~~~~~~i~~~~~~~~---~~~--- 253 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGAYDYP---SPE--- 253 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCC---TTG---
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHhCCCCCC---ccc---
Confidence 422 2345678887777889999999999999999999999943 233333333333211111 111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
....+.++.+++.+||+.||++||++.++++.
T Consensus 254 -~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 254 -WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11233568899999999999999999998753
No 94
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=329.58 Aligned_cols=244 Identities=17% Similarity=0.285 Sum_probs=188.7
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEE----EEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEI----AVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~v----avk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||.||+|+.. ++..+ ++|.+.... .....+.+.+|++++++++||||+++++++.... .
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---~ 91 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTST---V 91 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS----SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS---E
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC---c
Confidence 3478999999999999964 45544 555554222 1234578999999999999999999999998754 5
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++|+||+++|+|.+++.. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 92 ~~v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred eEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC--CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 799999999999999864 3456999999999999999999999998 9999999999999999999999999998653
Q ss_pred hh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 529 MA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 529 ~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
.. ...+.+||......++.++|||||||++|||+| |+.||.... ..+........ ..
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~~~-~~-------- 237 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEKG-ER-------- 237 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTT-CC--------
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcC-CC--------
Confidence 21 123567777767778999999999999999999 999995322 22222221111 10
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
...+...+..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 238 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 238 -LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111223345688999999999999999999999999998753
No 95
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.3e-38 Score=328.58 Aligned_cols=248 Identities=19% Similarity=0.271 Sum_probs=196.1
Q ss_pred hhcccccCCCeEEEEEEEC-----CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-----NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-----~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||.||++.+. +++.||||++.... .....+.|.+|++++++++||||+++++++.+.+....
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA----GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc----ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 4578999999999998763 67899999986432 23446779999999999999999999999987544467
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+++|+|.+++... .+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~--ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 9999999999999998643 4899999999999999999999999 9999999999999999999999999987653
Q ss_pred hh------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChH--------H----HHHHHhc
Q 006019 529 MA------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLE--------D----WAADYLS 584 (664)
Q Consensus 529 ~~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~--------~----~~~~~~~ 584 (664)
.. ...+.+||......++.++||||||+++|||+||+.||........ . .....+.
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 22 1225567766666778899999999999999999999842110000 0 0011111
Q ss_pred CCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 585 GVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 585 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
. ......+..++.++.+++.+||+.||++||++.++++.|+++.+.
T Consensus 266 ~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 266 R---------GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp T---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c---------ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 1 111122334446799999999999999999999999999998654
No 96
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.5e-37 Score=318.52 Aligned_cols=240 Identities=22% Similarity=0.302 Sum_probs=191.2
Q ss_pred ccccCCCeEEEEEEEC---CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 377 VIGSSPIGTVYKGTLS---NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 377 ~iG~G~~G~Vy~g~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
.||+|+||.||+|.+. ++..||||++...... ....++|.+|++++++++||||+++++++.. + ..++|||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--~~~lv~e 97 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND---PALKDELLAEANVMQQLDNPYIVRMIGICEA-E--SWMLVME 97 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S--SEEEEEE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccC---HHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C--CcEEEEE
Confidence 8999999999999652 4678999998654321 2345789999999999999999999999943 3 5689999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA--- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~--- 530 (664)
|+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 98 MAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp CCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred eCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC--eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 9999999999964 346899999999999999999999998 999999999999999999999999998765321
Q ss_pred ---------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 531 ---------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 531 ---------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
...+.+||......++.++||||||+++|||+| |+.||.. ....+........ .. ...
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--~~~~~~~~~~~~~-~~---------~~~ 241 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG--MKGSEVTAMLEKG-ER---------MGC 241 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT--CCHHHHHHHHHTT-CC---------CCC
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC--CCHHHHHHHHHcC-CC---------CCC
Confidence 123556776666667889999999999999999 9999943 2223332222221 10 112
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
+...+..+.+++.+||+.||++||++.++++.|+++..
T Consensus 242 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 242 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 23334678999999999999999999999999999864
No 97
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.3e-38 Score=331.52 Aligned_cols=247 Identities=20% Similarity=0.327 Sum_probs=194.9
Q ss_pred hhhcccccCCCeEEEEEEECC-C-----cEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCC
Q 006019 373 DFSNVIGSSPIGTVYKGTLSN-G-----VEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEP 445 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~~-~-----~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 445 (664)
.+.+.||+|+||.||+|.... + ..||+|.+.... .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 123 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA----HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG- 123 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc----ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC-
Confidence 445899999999999999643 2 479999885432 133457799999999999 8999999999998877
Q ss_pred ceeEEEEEecCCCChhhhhcccC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC
Q 006019 446 FTRMMVFEYAPNGTLFEHIHIKE------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED 513 (664)
Q Consensus 446 ~~~~lV~Ey~~~GsL~~~l~~~~------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~ 513 (664)
..++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.+
T Consensus 124 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 -PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNG 200 (333)
T ss_dssp -SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGCEEEGG
T ss_pred -ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC--cccCCcccceEEECCC
Confidence 5699999999999999986421 345899999999999999999999998 9999999999999999
Q ss_pred CceEecccCchhhhhhhh-----------hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHH
Q 006019 514 YAAKLSDLSFWNEIAMAE-----------MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAAD 581 (664)
Q Consensus 514 ~~~kl~DfGla~~~~~~~-----------~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~ 581 (664)
+.+||+|||+++...... ..+.+||......++.++|||||||++|||+| |+.||...... .....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~ 278 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN--SKFYK 278 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS--HHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh--HHHHH
Confidence 999999999998653221 23567777666778999999999999999999 99999543222 11222
Q ss_pred HhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 582 YLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 582 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
........ ..+...+..+.+++.+||+.||++||++.++++.|+++..
T Consensus 279 ~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 279 LVKDGYQM---------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCCCC---------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 22111100 0111223568899999999999999999999999998764
No 98
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.2e-37 Score=331.38 Aligned_cols=248 Identities=15% Similarity=0.250 Sum_probs=191.8
Q ss_pred hhcccccC--CCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 374 FSNVIGSS--PIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 374 ~~~~iG~G--~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
+.+.||+| +||.||+|+.. +++.||||++...... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~l 103 (389)
T 3gni_B 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS---NEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWV 103 (389)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEE
T ss_pred EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC---hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC--EEEE
Confidence 45889999 99999999976 6899999999764432 345577899999999999999999999999877 7799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh--
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA-- 528 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~-- 528 (664)
|||||++|+|.+++.......+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||.+....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG--YVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999999997655567999999999999999999999999 9999999999999999999999999875431
Q ss_pred --------------hhhhhcccccccCC--CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccc
Q 006019 529 --------------MAEMAATSKKLSSA--PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQF 592 (664)
Q Consensus 529 --------------~~~~~~~~pe~~~~--~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (664)
.....+.+||.... ..++.++|||||||++|||+||+.||....... .......+. ...+
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~--~~~~ 257 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGT--VPCL 257 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT--HHHHC----------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHhcCC--CCcc
Confidence 12233567887665 568899999999999999999999995322111 111111000 0000
Q ss_pred cC-------------------------------------CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 593 VD-------------------------------------PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 593 ~d-------------------------------------~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.+ ......+......+.+++.+||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 00001122334568999999999999999999999854
No 99
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-37 Score=321.33 Aligned_cols=247 Identities=12% Similarity=0.128 Sum_probs=195.0
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+++++++ +|+|++++++++.... ..++|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~--~~~lv 84 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL--HNVLV 84 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--EEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--eeEEE
Confidence 447899999999999995 5789999998864332 23578899999999 7999999999998777 67999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc-----eEecccCchhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA-----AKLSDLSFWNE 526 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~-----~kl~DfGla~~ 526 (664)
|||+ +|+|.+++... ...+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.
T Consensus 85 ~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS--LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp EECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred EEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 9999 99999999643 446999999999999999999999998 999999999999987776 99999999876
Q ss_pred hhhh----------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC-ChHHHHHHHhcCCCCC
Q 006019 527 IAMA----------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG-SLEDWAADYLSGVQPL 589 (664)
Q Consensus 527 ~~~~----------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~-~~~~~~~~~~~~~~~~ 589 (664)
.... ...+.+||......++.++|||||||++|||+||+.||..... ...+............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 240 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence 5321 2345678877777889999999999999999999999964332 2222222211110000
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 590 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 590 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
.........+..+.+++.+||+.||++||++++|++.|+++.+.
T Consensus 241 ------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 241 ------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp ------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 00000112235789999999999999999999999999999764
No 100
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.5e-37 Score=319.72 Aligned_cols=247 Identities=17% Similarity=0.237 Sum_probs=188.9
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|+..++..+|+|++...... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 80 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKK--RLVLVFE 80 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--CEEEEEE
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc---cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--eEEEEEE
Confidence 34789999999999999988999999998654322 122367889999999999999999999998876 6799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA--- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~--- 530 (664)
|+++ +|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 81 HLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp CCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred ecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 9985 99888863 3356899999999999999999999998 999999999999999999999999998865321
Q ss_pred ------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhc---CC--CCCcc-----cc
Q 006019 531 ------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLS---GV--QPLQQ-----FV 593 (664)
Q Consensus 531 ------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~---~~--~~~~~-----~~ 593 (664)
...+.+||.... ..++.++|||||||++|||+||+.||... ...+....... .. ..... ..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV--SEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 233567776654 45899999999999999999999999532 22222222111 00 00000 01
Q ss_pred CCCCC--------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 594 DPTLS--------SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 594 d~~~~--------~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
++... ........++.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11110 111223467889999999999999999999875
No 101
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-37 Score=320.44 Aligned_cols=251 Identities=22% Similarity=0.298 Sum_probs=195.4
Q ss_pred hcccccCCCeEEEEEEECC-C---cEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 375 SNVIGSSPIGTVYKGTLSN-G---VEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~~-~---~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
.+.||+|+||.||+|++.+ + ..+|+|.+.... .....+.|.+|++++++++||||+++++++.+.+. ..++
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~~ 100 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT----EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG-LPHV 100 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS-CCEE
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccc----cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC-CcEE
Confidence 3789999999999998532 2 368888875321 23445789999999999999999999999976552 3489
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA 530 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~ 530 (664)
|+||+.+|+|.+++.. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 101 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp EECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999964 3467899999999999999999999998 999999999999999999999999999755322
Q ss_pred -------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 531 -------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 531 -------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
...+.+||......++.++||||||+++|||+||+.|+... ....+......... .
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~-~~~~~~~~~~~~~~-~--------- 246 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH-IDPFDLTHFLAQGR-R--------- 246 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTT-SCGGGHHHHHHTTC-C---------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCcc-CCHHHHHHHhhcCC-C---------
Confidence 22345677777778899999999999999999966664322 22222222222211 0
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCCCC
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPDGA 644 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~~~ 644 (664)
...+...+..+.+++.+||+.||++||++.++++.|+++........
T Consensus 247 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 247 LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 11122233568999999999999999999999999999987654433
No 102
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.5e-37 Score=324.89 Aligned_cols=246 Identities=20% Similarity=0.325 Sum_probs=197.3
Q ss_pred hhhcccccCCCeEEEEEEEC------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc
Q 006019 373 DFSNVIGSSPIGTVYKGTLS------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF 446 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 446 (664)
.+.+.||+|+||.||+|+.. ++..||+|.+.... .......|.+|++++++++||||+++++++.+.+
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 101 (322)
T 1p4o_A 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ-- 101 (322)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS----CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS--
T ss_pred eeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc----CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC--
Confidence 34588999999999999864 36789999886322 1334567999999999999999999999998776
Q ss_pred eeEEEEEecCCCChhhhhcccC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEe
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKE--------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKL 518 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~--------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl 518 (664)
..++||||+++|+|.++++... ...+++..+.+++.+++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCSGGGEEECTTCCEEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC--CccCCCccceEEEcCCCeEEE
Confidence 5699999999999999986421 245789999999999999999999998 999999999999999999999
Q ss_pred cccCchhhhhhhh-----------hhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCC
Q 006019 519 SDLSFWNEIAMAE-----------MAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGV 586 (664)
Q Consensus 519 ~DfGla~~~~~~~-----------~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~ 586 (664)
+|||+++...... ..+.+||......++.++||||||+++|||+| |+.||.. ....+.........
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~--~~~~~~~~~~~~~~ 257 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGG 257 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT--SCHHHHHHHHHTTC
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc--CCHHHHHHHHHcCC
Confidence 9999987653221 23567777666778999999999999999999 8999842 33333333332221
Q ss_pred CCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 587 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 587 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
....+...+..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 258 ----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 258 ----------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred ----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 111222334568999999999999999999999999998865
No 103
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.6e-37 Score=323.84 Aligned_cols=237 Identities=16% Similarity=0.227 Sum_probs=180.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~ 127 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVL 127 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-------hHHHHHHHHHHHHhCCCCCCcceeeeEecCC--eEEEEE
Confidence 3478999999999999976 57889999986432 2356889999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC---CCceEecccCchhhhhh
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE---DYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~---~~~~kl~DfGla~~~~~ 529 (664)
||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 128 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 128 ELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999863 456899999999999999999999998 999999999999975 88999999999886532
Q ss_pred --------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 530 --------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 530 --------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
....+.+||......++.++|||||||++|||+||+.||...... ............. ...+. .
T Consensus 204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~i~~~~~~---~~~~~----~ 275 (349)
T 2w4o_A 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-QFMFRRILNCEYY---FISPW----W 275 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-HHHHHHHHTTCCC---CCTTT----T
T ss_pred ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-HHHHHHHHhCCCc---cCCch----h
Confidence 233566788888888999999999999999999999999543322 2222233322111 11111 1
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...+..+.+++.+||+.||++||++.|+++
T Consensus 276 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 223356889999999999999999999876
No 104
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.7e-37 Score=333.32 Aligned_cols=241 Identities=18% Similarity=0.248 Sum_probs=192.9
Q ss_pred hhhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
.+.+.||+|+||.||+|.. .+|..+|+|++..... .....+.+.+|++++++++|||||++++++.+.+ ..++|
T Consensus 14 ~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~~~lv 88 (444)
T 3soa_A 14 QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL---SARDHQKLEREARICRLLKHPNIVRLHDSISEEG--HHYLI 88 (444)
T ss_dssp EEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC---HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC--EEEEE
Confidence 3458999999999999986 4689999999875432 2334567999999999999999999999998877 77999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec---CCCceEecccCchhhhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT---EDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld---~~~~~kl~DfGla~~~~ 528 (664)
|||+++|+|.+++.. ...+++.....++.+++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++...
T Consensus 89 ~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g--ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG--VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 999999999998864 356999999999999999999999998 99999999999999 45789999999997653
Q ss_pred h---------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 529 M---------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 529 ~---------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
. ....+.+||......++.++||||+||++|||++|+.||.. ....+.......+.... ..+....
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~--~~~~~~~~~i~~~~~~~---~~~~~~~ 239 (444)
T 3soa_A 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD--EDQHRLYQQIKAGAYDF---PSPEWDT 239 (444)
T ss_dssp TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCCC---CTTTTTT
T ss_pred CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC--ccHHHHHHHHHhCCCCC---Ccccccc
Confidence 2 23456678888777889999999999999999999999943 33344444443332111 1111112
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.+.++.+++.+||+.||++||++.|+++
T Consensus 240 ----~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 240 ----VTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ----CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2356889999999999999999999886
No 105
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.5e-37 Score=326.32 Aligned_cols=245 Identities=13% Similarity=0.136 Sum_probs=194.3
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+. .+++.||||.+...... +.+.+|+++++++ +||||+++++++...+ ..++|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--~~~lv 83 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-------PQLHLEYRFYKQLGSGDGIPQVYYFGPCGK--YNAMV 83 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-------CCHHHHHHHHHHHCSCTTSCCEEEEEEETT--EEEEE
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-------HHHHHHHHHHHHhhCCCCCCEEEEEEecCC--ccEEE
Confidence 347899999999999996 57899999988644321 3588999999999 9999999999998876 67999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc-----eEecccCchhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA-----AKLSDLSFWNE 526 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~-----~kl~DfGla~~ 526 (664)
|||+ +|+|.+++... ...+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++. +||+|||+++.
T Consensus 84 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN--LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp EECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 9999 99999998643 457999999999999999999999998 999999999999999887 99999999986
Q ss_pred hhhh----------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCC-CChHHHHHHHhcCCCCC
Q 006019 527 IAMA----------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDN-GSLEDWAADYLSGVQPL 589 (664)
Q Consensus 527 ~~~~----------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~-~~~~~~~~~~~~~~~~~ 589 (664)
.... ...+.+||......++.++|||||||++|||+||+.||.... ....+............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 5321 234557787777888999999999999999999999996433 23333322221110000
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 590 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 590 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
.. .......+ ++.+++.+||+.||.+||++.+|++.|+++..
T Consensus 240 ~~------~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 240 PI------EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp CH------HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred CH------HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 00 00011123 78999999999999999999999999998864
No 106
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=331.76 Aligned_cols=260 Identities=18% Similarity=0.249 Sum_probs=201.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|++++++++||||+++++++...+....++||
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL----RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG----SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc----chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 4578999999999999976 4899999998643322 2246788999999999999999999999876544579999
Q ss_pred EecCCCChhhhhcccC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe----cCCCceEecccCchhhh
Q 006019 453 EYAPNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL----TEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl----d~~~~~kl~DfGla~~~ 527 (664)
||+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC--EEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 9999999999997432 234999999999999999999999999 9999999999999 88889999999999765
Q ss_pred hhhh--------hhcccccccCC--------CCCCcCCcchhhHHHHHHHHhCCCCccCCC--CChHHHHHHHhcCCCC-
Q 006019 528 AMAE--------MAATSKKLSSA--------PSASLESNVYNFGVLLFEMVTGRLPYLVDN--GSLEDWAADYLSGVQP- 588 (664)
Q Consensus 528 ~~~~--------~~~~~pe~~~~--------~~~s~ksDVySfGvvl~El~tG~~P~~~~~--~~~~~~~~~~~~~~~~- 588 (664)
.... ..+.+||.... ..++.++|||||||++|||+||+.||.... ....+.......+...
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~ 246 (396)
T 4eut_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSG 246 (396)
T ss_dssp CCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTT
T ss_pred cCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcc
Confidence 3322 23445654432 345778999999999999999999996322 2233444444433110
Q ss_pred -Cccc---c---------CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 589 -LQQF---V---------DPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 589 -~~~~---~---------d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
...+ . -+............+.+++.+||+.||++||++.++++.+++++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0000 0 0111234577788899999999999999999999999999999764
No 107
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.7e-37 Score=324.04 Aligned_cols=241 Identities=18% Similarity=0.224 Sum_probs=191.3
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
..+.||+|+||.||+|+. .++..||||++...... .....++|.+|++++++++||||+++++++...+ ..++||
T Consensus 58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 133 (348)
T 1u5q_A 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH--TAWLVM 133 (348)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc--chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--eEEEEE
Confidence 347899999999999996 57899999998754322 1334567999999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||++ |+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 209 (348)
T 1u5q_A 134 EYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS 209 (348)
T ss_dssp ECCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCC
T ss_pred ecCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCc
Confidence 9997 688888753 2456999999999999999999999998 99999999999999999999999999876532
Q ss_pred --hhhhccccccc---CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHH
Q 006019 530 --AEMAATSKKLS---SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQ 604 (664)
Q Consensus 530 --~~~~~~~pe~~---~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 604 (664)
....+.+||.. ....++.++|||||||++|||+||+.||.. ....+........... ... +...
T Consensus 210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~--~~~~~~~~~~~~~~~~--~~~-------~~~~ 278 (348)
T 1u5q_A 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--MNAMSALYHIAQNESP--ALQ-------SGHW 278 (348)
T ss_dssp CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCCC--CCC-------CTTS
T ss_pred ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--CChHHHHHHHHhcCCC--CCC-------CCCC
Confidence 23455678765 345688899999999999999999999843 2333333333322111 000 1122
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 006019 605 LETLGELIKSCVRADPEKRPTMRDIAAIL 633 (664)
Q Consensus 605 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 633 (664)
+..+.+++.+||+.||++||++.++++..
T Consensus 279 ~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 279 SEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 35688999999999999999999998753
No 108
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=8.4e-38 Score=327.67 Aligned_cols=252 Identities=17% Similarity=0.236 Sum_probs=194.8
Q ss_pred hhhcccccCCCeEEEEEEE-----CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 373 DFSNVIGSSPIGTVYKGTL-----SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-----~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
.+.+.||+|+||.||+|++ .++..||||++.... ....+.|.+|++++++++||||+++++++...+...
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-----PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-----HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 3458899999999999995 368899999986432 344567999999999999999999999987544446
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhh
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~ 527 (664)
.++||||+++|+|.+++... ...+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChhhEEECCCCCEEEcccccceec
Confidence 79999999999999998642 346999999999999999999999998 999999999999999999999999998765
Q ss_pred hhh------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCC------------hHHHHHHHh
Q 006019 528 AMA------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGS------------LEDWAADYL 583 (664)
Q Consensus 528 ~~~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~------------~~~~~~~~~ 583 (664)
... ...+.+||......++.++||||||+++|||+||+.||...... .........
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 321 12255677666666788999999999999999999998421100 000011111
Q ss_pred cCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 584 SGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 584 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
.. ......+..++..+.+++.+||+.||++||++.++++.|+.+.....
T Consensus 258 ~~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 258 EE---------GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hc---------ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11 11112233445678999999999999999999999999999976544
No 109
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=319.24 Aligned_cols=254 Identities=18% Similarity=0.207 Sum_probs=189.9
Q ss_pred hhhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC---CCcccceEEEEecCCC---
Q 006019 373 DFSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN---HKNFVNLIGFCEEEEP--- 445 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~--- 445 (664)
.+.+.||+|+||.||+|+. .+++.||+|++...............+.+|++++++++ ||||+++++++.....
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~ 91 (308)
T 3g33_A 12 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDRE 91 (308)
T ss_dssp EEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSE
T ss_pred EEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCc
Confidence 4458899999999999995 56899999999765433222222345677777777664 9999999999976442
Q ss_pred ceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchh
Q 006019 446 FTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN 525 (664)
Q Consensus 446 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~ 525 (664)
...++||||+. |+|.+++.......+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 92 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 168 (308)
T 3g33_A 92 IKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLAR 168 (308)
T ss_dssp EEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCTTTEEECTTSCEEECSCSCTT
T ss_pred eeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCEEEeeCcccc
Confidence 13689999997 69999997655566999999999999999999999999 9999999999999999999999999997
Q ss_pred hhhhh--------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC-----CCcc-
Q 006019 526 EIAMA--------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ-----PLQQ- 591 (664)
Q Consensus 526 ~~~~~--------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~-----~~~~- 591 (664)
..... ...+.+||......++.++|||||||++|||+||+.||... ...+.......... ....
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 169 IYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN--SEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS--SHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhCCCChhhccch
Confidence 65321 23456788777777899999999999999999999999432 22222222221100 0000
Q ss_pred ------ccCCCCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 592 ------FVDPTLS----SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 592 ------~~d~~~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...+... ...++....+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000000 001123457889999999999999999999875
No 110
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=325.75 Aligned_cols=239 Identities=15% Similarity=0.258 Sum_probs=191.8
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..+|+|.+.... ......+.+|+++|++++||||+++++++.+.+ ..++||
T Consensus 55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~--~~~lv~ 127 (387)
T 1kob_A 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY--EMVLIL 127 (387)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--EEEEEE
Confidence 4588999999999999975 68899999886432 223457899999999999999999999998876 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC--CCceEecccCchhhhhh-
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE--DYAAKLSDLSFWNEIAM- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~--~~~~kl~DfGla~~~~~- 529 (664)
||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 128 E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 128 EFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp ECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred EcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 99999999999863 3346999999999999999999999998 999999999999984 47899999999886532
Q ss_pred -------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 -------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
....+.+||......++.++|||||||++|||+||+.||.. ....+............. .... .
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~--~~~~~~~~~i~~~~~~~~---~~~~----~ 275 (387)
T 1kob_A 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG--EDDLETLQNVKRCDWEFD---EDAF----S 275 (387)
T ss_dssp SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--SSHHHHHHHHHHCCCCCC---SSTT----T
T ss_pred cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCC---cccc----c
Confidence 23456678888778889999999999999999999999943 233333333322211111 1111 1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+.++.+++.+||+.||++||++.|+++
T Consensus 276 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 276 SVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 22356889999999999999999999886
No 111
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.6e-37 Score=316.03 Aligned_cols=248 Identities=15% Similarity=0.218 Sum_probs=189.1
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 80 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLHDVLHSDK--KLTLVF 80 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS---TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc---CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC--EEEEEE
Confidence 3478999999999999975 5889999999754432 244577899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++ ++.+.+.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~--ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp ECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred ecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 99975 66665542 3456999999999999999999999998 99999999999999999999999999876531
Q ss_pred ------hhhhcccccccCCCC-CCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC-----CCc---ccc-
Q 006019 530 ------AEMAATSKKLSSAPS-ASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ-----PLQ---QFV- 593 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~-~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~-----~~~---~~~- 593 (664)
....+.+||...... ++.++|||||||++|||+||+.|+... .+..+.......... ... ...
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-NDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC-SSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC-CCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 133456788765544 799999999999999999998886432 222332222221100 000 000
Q ss_pred ---------CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 594 ---------DPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 594 ---------d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
........+.....+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00111122334567889999999999999999999876
No 112
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.4e-38 Score=321.84 Aligned_cols=242 Identities=24% Similarity=0.383 Sum_probs=189.6
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|+.. |..||||.+.... ..+.|.+|++++++++||||+++++++.+.+. ..++|||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~~lv~e 95 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG-GLYIVTE 95 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEEC
T ss_pred EEeEEecCCCceEEEEEEc-CCEEEEEEecchh-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC-ceEEEEe
Confidence 4588999999999999984 7899999885322 34679999999999999999999999865432 4689999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA--- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~--- 530 (664)
|+++|+|.+++.......+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 173 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 173 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCcceEEEeCCCcEEEeeccccccccccccC
Confidence 999999999987543344889999999999999999999998 999999999999999999999999998765422
Q ss_pred ---hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHH
Q 006019 531 ---EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLE 606 (664)
Q Consensus 531 ---~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 606 (664)
...+.+||......++.++||||||+++|||+| |+.||... ...+.......+. ....+...+.
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~ 241 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEKGY----------KMDAPDGCPP 241 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTTTC----------CCCCCTTCCH
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhcCC----------CCCCcccCCH
Confidence 223556777666778999999999999999999 99999432 2222222222210 0112223346
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 607 TLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 607 ~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
.+.+++.+||+.||++||++.++++.|+++..
T Consensus 242 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 78999999999999999999999999999864
No 113
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-37 Score=318.68 Aligned_cols=237 Identities=18% Similarity=0.237 Sum_probs=192.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|+.||+|++....... ....+.+.+|+.+++.++||||+++++++.+.+ ..++||
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--~~~lv~ 85 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ--QIFMIM 85 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC--EEEEEE
Confidence 3488999999999999975 68999999987543211 122456889999999999999999999998876 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++.. ...+++.....++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 86 DYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp CCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred eCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 99999999999863 356899999999999999999999998 99999999999999999999999999876532
Q ss_pred ---hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHH
Q 006019 530 ---AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLE 606 (664)
Q Consensus 530 ---~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 606 (664)
....+.+||......++.++|||||||++|||+||+.||.. .+..+........... ++.....
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--~~~~~~~~~i~~~~~~-----------~p~~~~~ 228 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD--SNTMKTYEKILNAELR-----------FPPFFNE 228 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHHCCCC-----------CCTTSCH
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCC-----------CCCCCCH
Confidence 23345678887777889999999999999999999999943 3334444444433111 1222335
Q ss_pred HHHHHHHHhccCCCCCCC-----CHHHHHH
Q 006019 607 TLGELIKSCVRADPEKRP-----TMRDIAA 631 (664)
Q Consensus 607 ~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 631 (664)
++.+++.+|++.||++|| +++|+++
T Consensus 229 ~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 229 DVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 688999999999999999 8888874
No 114
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-37 Score=318.77 Aligned_cols=243 Identities=19% Similarity=0.320 Sum_probs=191.7
Q ss_pred hhcccccCCCeEEEEEEECC----CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLSN----GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~----~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.||+|+||.||+|++.+ +..||+|.+.... .....+.|.+|++++++++||||+++++++.+. ..+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 88 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC----TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE---PTW 88 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS----CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS---SCE
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc----CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---CCE
Confidence 44889999999999998643 3358998875432 234567899999999999999999999998754 348
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+||||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 89 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 99999999999999864 3456899999999999999999999998 99999999999999999999999999876532
Q ss_pred h----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 530 A----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 530 ~----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
. ...+.+||......++.++||||||+++|||+| |+.||..... .+........ .. .
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~~~-~~---------~ 233 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKG-DR---------L 233 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHHHT-CC---------C
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHhcC-CC---------C
Confidence 2 123567777666778899999999999999999 9999953221 1122211111 10 0
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
..+...+..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 234 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 1112233568899999999999999999999999999865
No 115
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=322.44 Aligned_cols=241 Identities=18% Similarity=0.188 Sum_probs=184.9
Q ss_pred HHHHHhhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCC
Q 006019 367 LEAACEDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEE 444 (664)
Q Consensus 367 l~~~~~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 444 (664)
+......+.+.||+|+||.||+|+.. +++.||||++...... .....++..|+..+.++ +||||++++++|.+.+
T Consensus 54 ~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG---PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS---HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred hhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC---hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 33334445589999999999999976 6899999987543221 23344566666666655 8999999999998877
Q ss_pred CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCch
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW 524 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla 524 (664)
..++||||+ +|+|.+++... ...++|..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 131 --~~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 131 --ILYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp --EEEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred --EEEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--EecCCCCHHHEEECCCCCEEEccceee
Confidence 779999999 67999888643 456999999999999999999999998 999999999999999999999999998
Q ss_pred hhhhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 525 NEIAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 525 ~~~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
+.... ....+.+||...+ .++.++|||||||++|||++|+.|+... ..|. ..... . ....
T Consensus 205 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~-~~~~~-~-~~~~---- 272 (311)
T 3p1a_A 205 VELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQ-QLRQG-Y-LPPE---- 272 (311)
T ss_dssp EECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHH-HHTTT-C-CCHH----
T ss_pred eecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHH-HHhcc-C-CCcc----
Confidence 76532 2335667887765 6899999999999999999997765221 1111 11111 0 0000
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.+.....++.+++.+||+.||++||++.|+++
T Consensus 273 ---~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 ---FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11122357899999999999999999999886
No 116
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-36 Score=318.45 Aligned_cols=252 Identities=21% Similarity=0.351 Sum_probs=189.8
Q ss_pred HhhhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc--CCCcccceEEEEecCCC--c
Q 006019 371 CEDFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV--NHKNFVNLIGFCEEEEP--F 446 (664)
Q Consensus 371 ~~~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~~~--~ 446 (664)
...+.+.||+|+||.||+|+.. +..||||++.... ...+..|.+++... +||||+++++++..... .
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 3345589999999999999985 8899999985321 23455566666554 89999999999987631 2
Q ss_pred eeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC------CCCeEEeCcCCCCeEecCCCceEecc
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL------NPPIAHNYLNSSAVHLTEDYAAKLSD 520 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------~~~ivHrDLk~~NILld~~~~~kl~D 520 (664)
..++||||+++|+|.++++. ..+++..+..++.+++.||+|||+. .+.|+||||||+|||++.++.+||+|
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred ceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 67999999999999999963 3599999999999999999999987 22399999999999999999999999
Q ss_pred cCchhhhhh-------------hhhhcccccccCCCCCCcC------CcchhhHHHHHHHHhC----------CCCccCC
Q 006019 521 LSFWNEIAM-------------AEMAATSKKLSSAPSASLE------SNVYNFGVLLFEMVTG----------RLPYLVD 571 (664)
Q Consensus 521 fGla~~~~~-------------~~~~~~~pe~~~~~~~s~k------sDVySfGvvl~El~tG----------~~P~~~~ 571 (664)
||+++.... ....+.+||.......+.+ +|||||||++|||+|| +.||...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 999865421 2234567777665555544 8999999999999999 6666321
Q ss_pred C---CChHHHHHHHhcCCCCCccccCCCCCC--CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 572 N---GSLEDWAADYLSGVQPLQQFVDPTLSS--FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 572 ~---~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
. .....+. ..... .. ..+.... ...+++.++.+++.+||+.||++||++.+|++.|+++.+..
T Consensus 266 ~~~~~~~~~~~-~~~~~-~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 266 VPSDPSYEDMR-EIVCI-KK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SCSSCCHHHHH-HHHTT-SC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCCCCchhhhH-HHHhh-hc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 1 1111111 11111 00 1111111 12367788999999999999999999999999999997653
No 117
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=323.30 Aligned_cols=248 Identities=18% Similarity=0.285 Sum_probs=185.4
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CCcccceEEEEecC------CC
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HKNFVNLIGFCEEE------EP 445 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~------~~ 445 (664)
+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++ ||||+++++++... ..
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-----EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-----HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-----hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 4588999999999999964 68999999885432 234567999999999996 99999999999522 12
Q ss_pred ceeEEEEEecCCCChhhhhcc-cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCch
Q 006019 446 FTRMMVFEYAPNGTLFEHIHI-KESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW 524 (664)
Q Consensus 446 ~~~~lV~Ey~~~GsL~~~l~~-~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla 524 (664)
...++|+||+. |+|.+++.. .....+++..+..|+.+++.||+|||+.+++|+||||||+|||++.++.+||+|||++
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 24789999996 799998864 2345699999999999999999999998878999999999999999999999999998
Q ss_pred hhhhh---------------------hhhhccccccc---CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHH
Q 006019 525 NEIAM---------------------AEMAATSKKLS---SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAA 580 (664)
Q Consensus 525 ~~~~~---------------------~~~~~~~pe~~---~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~ 580 (664)
+.... ....+.+||.. ....++.++|||||||++|||+||+.||..... .+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~-- 261 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--LRI-- 261 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH--HHh--
Confidence 76431 22345678876 456678899999999999999999999942211 111
Q ss_pred HHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCCC
Q 006019 581 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITPD 642 (664)
Q Consensus 581 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~~ 642 (664)
...... .+. .......+.+++.+||+.||++||++.|+++.|+++......
T Consensus 262 --~~~~~~-----~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 262 --VNGKYS-----IPP----HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp ------CC-----CCT----TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred --hcCccc-----CCc----ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 110000 000 111123478999999999999999999999999999765443
No 118
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-38 Score=330.88 Aligned_cols=250 Identities=16% Similarity=0.184 Sum_probs=193.1
Q ss_pred hhcccccCCCeEEEEEEECC---------CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccc---------
Q 006019 374 FSNVIGSSPIGTVYKGTLSN---------GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVN--------- 435 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~---------~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~--------- 435 (664)
+.+.||+|+||.||+|+... +..||+|.+... +.+.+|++++++++||||++
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 45889999999999999764 789999998632 35889999999999999998
Q ss_pred ------eEEEEecCCCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeE
Q 006019 436 ------LIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVH 509 (664)
Q Consensus 436 ------l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NIL 509 (664)
+++++...+. ..++||||+ +|+|.+++.......+++..+..|+.+++.||+|||+.+ |+||||||+|||
T Consensus 116 ~~~i~~~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDK-YRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE--YVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTT-EEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CBCSCCCGGGEE
T ss_pred ccCccchhhccccCCc-EEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCCHHHEE
Confidence 6777776332 679999999 999999997544567999999999999999999999998 999999999999
Q ss_pred ecCCC--ceEecccCchhhhhhh----------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCC
Q 006019 510 LTEDY--AAKLSDLSFWNEIAMA----------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVD 571 (664)
Q Consensus 510 ld~~~--~~kl~DfGla~~~~~~----------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~ 571 (664)
++.++ .+||+|||+++..... ...+.+||......++.++|||||||++|||+||+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999765322 22445677777778899999999999999999999999644
Q ss_pred CCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 572 NGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
....................+.+.... ....+.++.+++.+||+.||++||++.+|++.|+++...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPFVGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHhccCChhhhhhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 323222221111000111111111110 011235689999999999999999999999999999754
No 119
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3e-37 Score=322.09 Aligned_cols=247 Identities=18% Similarity=0.261 Sum_probs=179.3
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|+.||+|++....... ..+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 82 (317)
T 2pmi_A 9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG----TPSTAIREISLMKELKHENIVRLYDVIHTEN--KLTLVF 82 (317)
T ss_dssp ----------CEEEEEECSSSCCEEEEEEEECCSTTC----SCHHHHHHHHHHTTCCBTTBCCEEEEECCTT--EEEEEE
T ss_pred EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc----cHHHHHHHHHHHHhcCCCCcceEEEEEEECC--eEEEEE
Confidence 3478999999999999964 58999999987544222 2356889999999999999999999998876 679999
Q ss_pred EecCCCChhhhhccc----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 453 EYAPNGTLFEHIHIK----ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~----~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
||++ |+|.+++... ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 9998 6999888543 2346899999999999999999999998 9999999999999999999999999987653
Q ss_pred h---------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC-----CCccc-
Q 006019 529 M---------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ-----PLQQF- 592 (664)
Q Consensus 529 ~---------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~-----~~~~~- 592 (664)
. ....+.+||.... ..++.++|||||||++|||+||+.||.... ..+.......... .....
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhHhhhhh
Confidence 2 1234567776654 457899999999999999999999995322 2222222211000 00000
Q ss_pred ----cCCCCCC-------------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 593 ----VDPTLSS-------------FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 593 ----~d~~~~~-------------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+.... .......++.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000000 01122356899999999999999999999875
No 120
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=324.18 Aligned_cols=253 Identities=18% Similarity=0.296 Sum_probs=193.1
Q ss_pred hhcccccCCCeEEEEEEE-----CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTL-----SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-----~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||.||+|++ .++..||||++.... ....+.|.+|++++++++||||+++++++...+....
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 458899999999999985 368899999986422 2345789999999999999999999999876543356
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+++|+|.+++... ...+++..+.+++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC--EeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 8999999999999999643 356999999999999999999999998 9999999999999999999999999987653
Q ss_pred hh------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCC-------C
Q 006019 529 MA------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP-------L 589 (664)
Q Consensus 529 ~~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~-------~ 589 (664)
.. ...+.+||......++.++||||||+++|||+||+.|+... ..++... ...... +
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP---PAEFMRM-IGNDKQGQMIVFHL 272 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSH---HHHHHHH-HCTTCCTHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCC---HHHHHHh-hccccchhhhHHHH
Confidence 21 12345677665566788999999999999999999998421 1111100 000000 0
Q ss_pred cccc-CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 590 QQFV-DPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 590 ~~~~-d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
...+ .......+..++.++.+++.+||+.||++||++.|+++.|+++.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0000 000111233345679999999999999999999999999999864
No 121
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.5e-36 Score=315.61 Aligned_cols=245 Identities=18% Similarity=0.262 Sum_probs=195.2
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCC-chhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDW-PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.+.||+|+||.||+|+.. +|..||+|.+........ .....+++.+|++++++++||||+++++++.+.+ ..+
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 91 (321)
T 2a2a_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--DVV 91 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--EEE
Confidence 345689999999999999975 588999999976543321 1123567999999999999999999999998876 679
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC----ceEecccCchh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY----AAKLSDLSFWN 525 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~----~~kl~DfGla~ 525 (664)
+||||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 99999999999999863 456899999999999999999999998 99999999999999888 79999999987
Q ss_pred hhhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 526 EIAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 526 ~~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
.... ....+.+||......++.++||||||+++|||+||+.||.. ....+................
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--~~~~~~~~~i~~~~~~~~~~~---- 241 (321)
T 2a2a_A 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--DTKQETLANITSVSYDFDEEF---- 241 (321)
T ss_dssp ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC--SSHHHHHHHHHTTCCCCCHHH----
T ss_pred ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHhcccccChhh----
Confidence 6532 23346678887777889999999999999999999999943 233333333332211111000
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+..+.+++.+||+.||++||++.|+++
T Consensus 242 ---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 242 ---FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ---HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ---hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0112356889999999999999999999886
No 122
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=327.65 Aligned_cols=239 Identities=17% Similarity=0.272 Sum_probs=190.7
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+++.. +++.||+|++....... ....+.+.+|++++++++|||||++++++.+.+ ..++||
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lv~ 94 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE--DMFMVV 94 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEEEE
Confidence 4488999999999999965 58899999986533211 123467899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp CCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 99999999999863 456999999999999999999999999 99999999999999999999999999976532
Q ss_pred -----hhhhcccccccCC---CCCCcCCcchhhHHHHHHHHhCCCCccCCCC-ChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 530 -----AEMAATSKKLSSA---PSASLESNVYNFGVLLFEMVTGRLPYLVDNG-SLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 530 -----~~~~~~~pe~~~~---~~~s~ksDVySfGvvl~El~tG~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
....+.+||.... ..++.++|||||||++|||+||+.||..... ...+......... ..+
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~-----------~~~ 239 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV-----------VTY 239 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC-----------CCC
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc-----------cCC
Confidence 2344667887653 3578899999999999999999999964332 2333333222211 112
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCC-HHHHHH
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPT-MRDIAA 631 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs-~~ev~~ 631 (664)
+......+.+++.+||+.||++||+ +.++.+
T Consensus 240 p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 240 PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 2233457899999999999999998 666653
No 123
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.6e-37 Score=321.40 Aligned_cols=248 Identities=23% Similarity=0.415 Sum_probs=194.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEE--EEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEI--AVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~v--avk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.||+|+||.||+|+.. ++..+ ++|.+..... ....+.+.+|+++++++ +||||+++++++.+.+ ..+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 102 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS----KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--YLY 102 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT--EEE
T ss_pred ceeeeecCCCceEEEEEEccCCcccceeeeeeccccc----hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC--ceE
Confidence 4588999999999999964 45544 8887764222 22346799999999999 8999999999998877 779
Q ss_pred EEEEecCCCChhhhhcccC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc
Q 006019 450 MVFEYAPNGTLFEHIHIKE--------------SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA 515 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~--------------~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~ 515 (664)
+||||+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYV 180 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECGGGC
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCccceEEEcCCCe
Confidence 9999999999999986432 246999999999999999999999998 999999999999999999
Q ss_pred eEecccCchhhhhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCC
Q 006019 516 AKLSDLSFWNEIAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGV 586 (664)
Q Consensus 516 ~kl~DfGla~~~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~ 586 (664)
+||+|||+++.... ....+.+||......++.++||||||+++|||+| |+.||.. ....+.......+.
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~--~~~~~~~~~~~~~~ 258 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--MTCAELYEKLPQGY 258 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHGGGTC
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC--CcHHHHHHHhhcCC
Confidence 99999999874321 1223556776666667899999999999999999 9999943 33333333332221
Q ss_pred CCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 587 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 587 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
. ...+...+..+.+++.+||+.||++||++.++++.|+++.....
T Consensus 259 ~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 259 R----------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp C----------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred C----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 01122234568999999999999999999999999999987543
No 124
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.4e-37 Score=313.06 Aligned_cols=238 Identities=17% Similarity=0.307 Sum_probs=177.4
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .+++.||+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 90 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--AGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN--YVYLVL 90 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh--hhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC--eEEEEE
Confidence 347899999999999996 478999999986432211 122467999999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 91 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 91 EMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp ECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred ecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 99999999999863 3457899999999999999999999998 99999999999999999999999999876431
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
....+.+||......++.++||||||+++|||+||+.||...... +..... .... ...+..
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~----------~~~~-~~~~~~ 234 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--NTLNKV----------VLAD-YEMPSF 234 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------C----------CSSC-CCCCTT
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--HHHHHH----------hhcc-cCCccc
Confidence 123456788877777899999999999999999999999532211 111111 0000 011222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...++.+++.+||+.||++||++.++++
T Consensus 235 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 235 LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 3456889999999999999999998875
No 125
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.7e-37 Score=313.01 Aligned_cols=246 Identities=20% Similarity=0.241 Sum_probs=192.1
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||+|.+...... ....+.+.+|++++++++||||+++++++........++||
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT---EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC---HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 3478999999999999975 6899999998754322 34467899999999999999999999988653333679999
Q ss_pred EecCCCChhhhhccc--CCCCCCHHHHHHHHHHHHHHHHHhhcCC---CCeEEeCcCCCCeEecCCCceEecccCchhhh
Q 006019 453 EYAPNGTLFEHIHIK--ESEHLDWGMRLRIAMGMAYCLEHMHQLN---PPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~---~~ivHrDLk~~NILld~~~~~kl~DfGla~~~ 527 (664)
||+++|+|.+++... ....+++..+.+++.+++.||+|||+.+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 999999999998643 3455999999999999999999999865 34999999999999999999999999998765
Q ss_pred hhh---------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 528 AMA---------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 528 ~~~---------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
... ...+.+||......++.++||||||+++|||+||+.||... ...+.......+.. .
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~i~~~~~----------~ 234 (279)
T 2w5a_A 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--SQKELAGKIREGKF----------R 234 (279)
T ss_dssp ---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCC----------C
T ss_pred ccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--CHHHHHHHHhhccc----------c
Confidence 321 22356788777777899999999999999999999999432 23333333322211 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILR 634 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~ 634 (664)
..+...+.++.+++.+||+.||++||++.||++.+.
T Consensus 235 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 112233457899999999999999999999987654
No 126
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.2e-37 Score=312.29 Aligned_cols=236 Identities=19% Similarity=0.294 Sum_probs=173.2
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .+++.||+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 17 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 92 (275)
T 2eue_A 17 IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK--SDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD--EIIMVI 92 (275)
T ss_dssp CCC---------EEEEECTTTCCEEEEEEECSCC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--CEEEEE
T ss_pred EEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--eEEEEe
Confidence 347899999999999985 468999999986543222 233567899999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+ +|+|.+++.. ...+++..+.+++.+++.||+|||+.+ ++||||||+||++++++.+||+|||+++.....
T Consensus 93 e~~-~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~--i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 93 EYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp ECC-CEEHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 999 6788888753 356999999999999999999999999 999999999999999999999999998765322
Q ss_pred ------hhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 531 ------EMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 531 ------~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
...+.+||....... +.++||||||+++|||+||+.||.. ................ .+..
T Consensus 168 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--~~~~~~~~~~~~~~~~-----------~~~~ 234 (275)
T 2eue_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--ESIPVLFKNISNGVYT-----------LPKF 234 (275)
T ss_dssp -------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCC-----------CCTT
T ss_pred ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCC-----------CCcc
Confidence 234556776655544 7899999999999999999999943 3333333333332111 1122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 3356889999999999999999999875
No 127
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=324.54 Aligned_cols=258 Identities=15% Similarity=0.115 Sum_probs=186.5
Q ss_pred hhcccccCCCeEEEEEEEC----CCcEEEEEEeeecccCCCc------hhHHHHHHHHHHHHhccCCCcccceEEEEecC
Q 006019 374 FSNVIGSSPIGTVYKGTLS----NGVEIAVASVSVASAKDWP------KNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEE 443 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~----~~~~vavk~~~~~~~~~~~------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 443 (664)
+.+.||+|+||.||+|+.. ++..+|+|+.......... ......+.+|+..++.++||||+++++++...
T Consensus 41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE
T ss_pred EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc
Confidence 4578999999999999975 5778999988654211000 00123477889999999999999999999772
Q ss_pred --CCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC--ceEec
Q 006019 444 --EPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY--AAKLS 519 (664)
Q Consensus 444 --~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~--~~kl~ 519 (664)
+....++||||+ +|+|.+++... ..+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++ .+||+
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~~~kL~ 195 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENE--YVHGDIKAANLLLGYKNPDQVYLA 195 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEESSSTTSEEEC
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eeCCCcCHHHEEEccCCCCcEEEE
Confidence 122679999999 99999998643 37999999999999999999999998 99999999999999887 99999
Q ss_pred ccCchhhhhh----------------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHh
Q 006019 520 DLSFWNEIAM----------------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYL 583 (664)
Q Consensus 520 DfGla~~~~~----------------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~ 583 (664)
|||+++.... ....+.+||......++.++|||||||++|||+||+.||...............
T Consensus 196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 275 (345)
T 2v62_A 196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKT 275 (345)
T ss_dssp CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHH
T ss_pred eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHH
Confidence 9999975522 123455677777777899999999999999999999999543332222111110
Q ss_pred cCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 584 SGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 584 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
............... ....+.++.+++.+||+.||++||++.+|++.|+++.-
T Consensus 276 ~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 276 NLLDELPQSVLKWAP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHTTTHHHHHHSC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred hhcccccHHHHhhcc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 000001110000000 01233578999999999999999999999999998754
No 128
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.1e-36 Score=321.80 Aligned_cols=237 Identities=18% Similarity=0.237 Sum_probs=193.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|..||+|++....... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 120 (350)
T 1rdq_E 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS--NLYMVM 120 (350)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC--EEEEEE
Confidence 3478999999999999975 68999999986543211 123467889999999999999999999998876 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp ECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999999998643 45899999999999999999999999 99999999999999999999999999886532
Q ss_pred ---hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHH
Q 006019 530 ---AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLE 606 (664)
Q Consensus 530 ---~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 606 (664)
....+.+||......++.++|||||||++|||+||+.||.. ....+.......+... ++.....
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--~~~~~~~~~i~~~~~~-----------~p~~~~~ 263 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA--DQPIQIYEKIVSGKVR-----------FPSHFSS 263 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCC-----------CCTTCCH
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC--CCHHHHHHHHHcCCCC-----------CCCCCCH
Confidence 23456678887777889999999999999999999999943 3344444444433111 1222335
Q ss_pred HHHHHHHHhccCCCCCCCC-----HHHHHH
Q 006019 607 TLGELIKSCVRADPEKRPT-----MRDIAA 631 (664)
Q Consensus 607 ~l~~l~~~Cl~~~P~~RPs-----~~ev~~ 631 (664)
.+.+++.+||+.||++||+ ++||.+
T Consensus 264 ~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 6899999999999999998 777764
No 129
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-37 Score=335.21 Aligned_cols=237 Identities=22% Similarity=0.340 Sum_probs=191.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|+.||||++....... ......+.+|+++++.++||||+++++++...+ ..++||
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~--~~~lv~ 95 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS--LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS--DIFMVM 95 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH--TTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--EEEEEE
Confidence 4578999999999999975 68999999997543211 123467899999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.+++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 96 EYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp ECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC--CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 9999999999986 3456999999999999999999999998 999999999999999999999999998765322
Q ss_pred ------hhhcccccccCCCC-CCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 531 ------EMAATSKKLSSAPS-ASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 531 ------~~~~~~pe~~~~~~-~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
...+.+||...+.. .+.++|||||||++|||+||+.||.. ....+.......+... .+..
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~--~~~~~~~~~i~~~~~~-----------~p~~ 238 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD--DHVPTLFKKICDGIFY-----------TPQY 238 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC--SSSHHHHHHHHTTCCC-----------CCTT
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC--CCHHHHHHHHhcCCcC-----------CCcc
Confidence 23455677666554 47899999999999999999999953 3333444443332111 1122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...++.+++.+||+.||++|||+.|+++
T Consensus 239 ~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 239 LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 2356889999999999999999999987
No 130
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.9e-36 Score=321.76 Aligned_cols=238 Identities=19% Similarity=0.215 Sum_probs=184.4
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+++.. +++.||||++...... .+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 24 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 95 (361)
T 3uc3_A 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI------DENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIIM 95 (361)
T ss_dssp EEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS------CHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc------cHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--EEEEEE
Confidence 4588999999999999975 6899999998643322 256889999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc--eEecccCchhhhhh-
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA--AKLSDLSFWNEIAM- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~--~kl~DfGla~~~~~- 529 (664)
||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~--ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 96 EYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred EeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 99999999999863 346999999999999999999999999 999999999999998775 99999999874321
Q ss_pred -------hhhhcccccccCCCCCCcC-CcchhhHHHHHHHHhCCCCccCCC--CChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 530 -------AEMAATSKKLSSAPSASLE-SNVYNFGVLLFEMVTGRLPYLVDN--GSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~k-sDVySfGvvl~El~tG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
....+.+||......++.+ +|||||||++|||+||+.||.... .................. .
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-----~--- 243 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP-----D--- 243 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC-----T---
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC-----C---
Confidence 2234557776655555444 899999999999999999995322 223333333332211111 0
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 244 -~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 -DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 01123568899999999999999999999874
No 131
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.4e-36 Score=318.45 Aligned_cols=239 Identities=17% Similarity=0.240 Sum_probs=183.0
Q ss_pred hhhcccccCCCeEEEEEEE----CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 373 DFSNVIGSSPIGTVYKGTL----SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~----~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
.+.+.||+|+||.||+++. .+++.+|+|++....... .......+.+|++++++++||||+++++++...+ ..
T Consensus 20 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~ 96 (327)
T 3a62_A 20 ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-NAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG--KL 96 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEEECSS--CE
T ss_pred EEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh-hhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--EE
Confidence 3458899999999999997 478999999986543211 1123456889999999999999999999998877 67
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+++|+|.+++.. ...+++.....++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~--ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC--EEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 999999999999999863 346889999999999999999999998 9999999999999999999999999987542
Q ss_pred h---------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 529 M---------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 529 ~---------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
. ....+.+||......++.++|||||||++|||+||+.||.. ....+...........
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~--~~~~~~~~~i~~~~~~----------- 239 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG--ENRKKTIDKILKCKLN----------- 239 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHTCCC-----------
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC--CCHHHHHHHHHhCCCC-----------
Confidence 1 12345678877777789999999999999999999999943 3334444444332111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRP-----TMRDIAA 631 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 631 (664)
.+......+.+++.+||+.||++|| ++.++++
T Consensus 240 ~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 240 LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1222335688999999999999999 6667664
No 132
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=9.9e-37 Score=311.92 Aligned_cols=238 Identities=18% Similarity=0.329 Sum_probs=190.4
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..||+|++....... ......+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 88 (279)
T 3fdn_A 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK--AGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT--RVYLIL 88 (279)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--HTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccch--hhHHHHHHHHHHHHHcCCCCCCcchhheEecCC--EEEEEE
Confidence 3478999999999999975 46789999986533211 123467899999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~--i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 89 EYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT--CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999998643 46899999999999999999999998 999999999999999999999999988654322
Q ss_pred -----hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHH
Q 006019 531 -----EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQL 605 (664)
Q Consensus 531 -----~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 605 (664)
...+.+||......++.++||||||+++|||++|+.||.. ....+........... .+....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--~~~~~~~~~~~~~~~~-----------~~~~~~ 231 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--NTYQETYKRISRVEFT-----------FPDFVT 231 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHHTCCC-----------CCTTSC
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC--CcHHHHHHHHHhCCCC-----------CCCcCC
Confidence 2345678877777889999999999999999999999942 2333333222221111 122233
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 606 ETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 606 ~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
..+.+++.+||+.||++||++.|+++.
T Consensus 232 ~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 232 EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 568899999999999999999999874
No 133
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.9e-37 Score=318.70 Aligned_cols=248 Identities=19% Similarity=0.332 Sum_probs=195.8
Q ss_pred hhcccccCCCeEEEEEEE------CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCc
Q 006019 374 FSNVIGSSPIGTVYKGTL------SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPF 446 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 446 (664)
+.+.||+|+||.||+|+. .+++.||||.+.... .....+.+.+|+++++++ +||||+++++++...+.
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~- 105 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG- 105 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS-
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC----CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC-
Confidence 458999999999999984 346889999986432 233456799999999999 79999999999976542
Q ss_pred eeEEEEEecCCCChhhhhcccCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKES--------------EHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE 512 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~~--------------~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~ 512 (664)
..++||||+++|+|.+++..... ..+++..+..++.+++.||+|||+.+ |+||||||+||+++.
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSE 183 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEECG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC--cccccCccceEEECC
Confidence 46899999999999999974432 22889999999999999999999998 999999999999999
Q ss_pred CCceEecccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHH
Q 006019 513 DYAAKLSDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAA 580 (664)
Q Consensus 513 ~~~~kl~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~ 580 (664)
++.+||+|||+++..... ...+.+||......++.++||||||+++|||+| |+.||...... .....
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~ 262 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCR 262 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHHHH
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh-HHHHH
Confidence 999999999998765321 124567787767778999999999999999999 99999543322 12222
Q ss_pred HHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 581 DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 581 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
..... ... ..+......+.+++.+||+.||++||++.++++.|+++...
T Consensus 263 ~~~~~-~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 263 RLKEG-TRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp HHHHT-CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhccC-ccC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 22221 110 11122235688999999999999999999999999998754
No 134
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=326.09 Aligned_cols=232 Identities=20% Similarity=0.225 Sum_probs=187.7
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+.. +++.||+|++....... ....+.+.+|.++++.+ +||||+++++++...+ ..++|
T Consensus 27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lv 102 (353)
T 3txo_A 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ--DDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--RLFFV 102 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--HTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc--hhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC--EEEEE
Confidence 4588999999999999975 58999999997532111 12345688999999988 6999999999998877 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 103 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 103 MEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 999999999999864 356999999999999999999999998 99999999999999999999999999875321
Q ss_pred -------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 -------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
....+.+||......++.++|||||||++|||+||+.||. ..+..+....+...... ++.
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~--~~~~~~~~~~i~~~~~~-----------~p~ 245 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE--AENEDDLFEAILNDEVV-----------YPT 245 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHCCCC-----------CCT
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCC--CCCHHHHHHHHHcCCCC-----------CCC
Confidence 2334567777666668899999999999999999999994 33444444444443211 122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTM 626 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~ 626 (664)
.....+.+++.+||+.||++||++
T Consensus 246 ~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 246 WLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred CCCHHHHHHHHHHhhhCHHHccCC
Confidence 233568899999999999999998
No 135
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=318.66 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=185.1
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHH--HhccCCCcccceEEEEec---CCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDT--LSKVNHKNFVNLIGFCEE---EEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~--l~~l~H~niv~l~g~~~~---~~~~~~ 448 (664)
+.+.||+|+||.||+|+. ++..||||++.... ...+..|.++ +..++||||+++++++.. .+....
T Consensus 17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN--------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred eeeecccCCCeEEEEEEE-CCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 448899999999999987 67899999986332 2344445444 556899999999986643 222246
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCCeEEeCcCCCCeEecCCCceEeccc
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-------NPPIAHNYLNSSAVHLTEDYAAKLSDL 521 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-------~~~ivHrDLk~~NILld~~~~~kl~Df 521 (664)
++||||+++|+|.+++... ..++..+.+|+.+++.||+|||+. .+.|+||||||+|||++.++.+||+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 8999999999999999633 358999999999999999999988 113999999999999999999999999
Q ss_pred Cchhhhhh-----------------hhhhcccccccCC-------CCCCcCCcchhhHHHHHHHHhCCCCccCCCCC---
Q 006019 522 SFWNEIAM-----------------AEMAATSKKLSSA-------PSASLESNVYNFGVLLFEMVTGRLPYLVDNGS--- 574 (664)
Q Consensus 522 Gla~~~~~-----------------~~~~~~~pe~~~~-------~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~--- 574 (664)
|+++.... ....+.+||...+ ..++.++|||||||++|||+||+.|+......
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 99975421 2335567776654 34567899999999999999998876422110
Q ss_pred ------------hHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 575 ------------LEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 575 ------------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
..+.......... ....+... .......+..+.+++.+||+.||++|||+.|+++.|++++..-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREK-QRPKFPEA-WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSC-CCCCCCTT-CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHhhhcccCCCchHHHHHhhhcccc-cCCCCCcc-cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 0001111111100 01111111 1123346678999999999999999999999999999998653
No 136
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.8e-37 Score=319.66 Aligned_cols=235 Identities=20% Similarity=0.315 Sum_probs=177.6
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CCcccceEEEEecCCCceeEEEEE
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.||+|+||.||+|+.. +++.||||++... ....+.+|++++++++ ||||+++++++.+.. ..++|||
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--~~~lv~e 86 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--HTFLVME 86 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG--------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh--------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--EEEEEEE
Confidence 67999999999999975 5899999998532 3457889999999997 999999999998876 7799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC---ceEecccCchhhhhh-
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY---AAKLSDLSFWNEIAM- 529 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~---~~kl~DfGla~~~~~- 529 (664)
|+++|+|.+++.. ...+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++....
T Consensus 87 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 87 LLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred ccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 9999999999964 356999999999999999999999998 99999999999998665 899999999875421
Q ss_pred --------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC-----ChHHHHHHHhcCCCCCccccCCC
Q 006019 530 --------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG-----SLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 530 --------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
....+.+||......++.++|||||||++|||+||+.||..... ...+.......+......
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~----- 237 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG----- 237 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCS-----
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCc-----
Confidence 13345678888888889999999999999999999999953221 222333333222111000
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
......+.++.+++.+||+.||++||++.|+++
T Consensus 238 --~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 238 --EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp --HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred --ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 000123457899999999999999999998864
No 137
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-36 Score=310.61 Aligned_cols=240 Identities=18% Similarity=0.295 Sum_probs=188.0
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
.+.+.||+|+||.||+++.. ++..+|+|++...... ...+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--~~~lv 98 (285)
T 3is5_A 25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ----VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH--NMYIV 98 (285)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred eecceeccCCCeEEEEEEEccCCceEEEEEeeccccc----hhHHHHHHHHHHHHhCCCchHHhHHHheecCC--eEEEE
Confidence 45589999999999999974 5889999998765432 23467999999999999999999999998776 67999
Q ss_pred EEecCCCChhhhhccc--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe---cCCCceEecccCchhh
Q 006019 452 FEYAPNGTLFEHIHIK--ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL---TEDYAAKLSDLSFWNE 526 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl---d~~~~~kl~DfGla~~ 526 (664)
|||+++|+|.+++... ....+++..+..|+.+++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~--ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC--EEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 9999999999988532 3467999999999999999999999998 9999999999999 4568899999999976
Q ss_pred hhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 527 IAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 527 ~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
... ....+.+||... ..++.++||||||+++|||+||+.||.. ....+............. ....
T Consensus 177 ~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~--~~~~~~~~~~~~~~~~~~----~~~~ 249 (285)
T 3is5_A 177 FKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG--TSLEEVQQKATYKEPNYA----VECR 249 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCC----C--C
T ss_pred cCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC--CCHHHHHhhhccCCcccc----cccC
Confidence 532 123456777654 4678999999999999999999999943 333333332222211110 0011
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
. ....+.+++.+||+.||++||++.|+++
T Consensus 250 ~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 250 P----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred c----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 2246889999999999999999999875
No 138
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.8e-36 Score=309.04 Aligned_cols=252 Identities=17% Similarity=0.270 Sum_probs=197.5
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCC-chhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDW-PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
..+.+.||+|+||.||+|+.. ++..+|+|.+........ .....+.|.+|++++++++||||+++++++.+.+ ..+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~ 84 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVV 84 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEE
T ss_pred hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--eEE
Confidence 345588999999999999976 689999999876543221 1123567999999999999999999999998876 679
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC----ceEecccCchh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY----AAKLSDLSFWN 525 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~----~~kl~DfGla~ 525 (664)
+||||+++++|.+++.. ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++ .+||+|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999999863 346899999999999999999999998 99999999999999877 89999999987
Q ss_pred hhhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 526 EIAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 526 ~~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
.... ....+.+||......++.++||||||+++|||+||+.||... ...+...............
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~----- 233 (283)
T 3bhy_A 161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE--TKQETLTNISAVNYDFDEE----- 233 (283)
T ss_dssp ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--SHHHHHHHHHTTCCCCCHH-----
T ss_pred eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc--chHHHHHHhHhcccCCcch-----
Confidence 6532 223456788877778899999999999999999999999432 2233332222211111000
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHHhhhC
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA--ILREITG 638 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~ 638 (664)
.....+..+.+++.+||+.||++||++.++++ .++.+..
T Consensus 234 --~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 234 --YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp --HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred --hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 00112356889999999999999999999997 4555543
No 139
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.8e-37 Score=314.04 Aligned_cols=241 Identities=19% Similarity=0.286 Sum_probs=192.5
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecC--------
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEE-------- 443 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-------- 443 (664)
.+.+.||+|+||.||+|+.. +++.||+|.+.... ..+.+|++++++++||||+++++++...
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 14 KEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp EEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 34588999999999999976 78999999986432 2467899999999999999999998541
Q ss_pred ------CCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceE
Q 006019 444 ------EPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAK 517 (664)
Q Consensus 444 ------~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~k 517 (664)
.....++||||+++|+|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+||++++++.+|
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEEETTEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCHHHEEEcCCCCEE
Confidence 1124689999999999999997555567999999999999999999999998 99999999999999999999
Q ss_pred ecccCchhhhhhh--------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCC
Q 006019 518 LSDLSFWNEIAMA--------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL 589 (664)
Q Consensus 518 l~DfGla~~~~~~--------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~ 589 (664)
|+|||+++..... ...+.+||......++.++||||||+++|||+||+.|+... ..+.......
T Consensus 163 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~~~~~~---- 234 (284)
T 2a19_B 163 IGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----SKFFTDLRDG---- 234 (284)
T ss_dssp ECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----HHHHHHHHTT----
T ss_pred ECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----HHHHHHhhcc----
Confidence 9999998765321 23455677777777899999999999999999999987321 1111111111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 590 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 590 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
.+ +...+..+.+++.+||+.||++||++.|+++.|+.+.....
T Consensus 235 ------~~---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 235 ------II---SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp ------CC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ------cc---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 01 11122457899999999999999999999999999876543
No 140
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.6e-36 Score=307.31 Aligned_cols=246 Identities=17% Similarity=0.237 Sum_probs=192.3
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
.+.+.||+|+||.||+|+.. ++..+|+|++....... .+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv 84 (277)
T 3f3z_A 12 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED-----VDRFKQEIEIMKSLDHPNIIRLYETFEDNT--DIYLV 84 (277)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC-----HHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch-----HHHHHHHHHHHHhCCCCCEeeEEEEEecCC--eEEEE
Confidence 34588999999999999975 46789999987544322 467999999999999999999999998876 67999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe---cCCCceEecccCchhhhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL---TEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl---d~~~~~kl~DfGla~~~~ 528 (664)
|||+++|+|.+++.. ...+++..+..|+.+++.||+|||+.+ |+||||||+||++ +.++.+||+|||++....
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 85 MELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 999999999998864 345899999999999999999999999 9999999999999 788999999999987553
Q ss_pred hh--------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 529 MA--------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 529 ~~--------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
.. ...+.+||.... .++.++||||||+++|||+||+.||.. ....+.......+........ ..
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~--~~~~~~~~~~~~~~~~~~~~~---~~-- 232 (277)
T 3f3z_A 161 PGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSA--PTDSEVMLKIREGTFTFPEKD---WL-- 232 (277)
T ss_dssp TTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCCHHH---HT--
T ss_pred CccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCC--CCHHHHHHHHHhCCCCCCchh---hh--
Confidence 22 233456776544 478999999999999999999999943 233333333333211111000 00
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHHhhhCC
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIAA--ILREITGI 639 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~~~ 639 (664)
..+..+.+++.+||+.||++||++.++++ .+++....
T Consensus 233 --~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 271 (277)
T 3f3z_A 233 --NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 271 (277)
T ss_dssp --TSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHCC
T ss_pred --cCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccccc
Confidence 12356889999999999999999999985 44444443
No 141
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2e-37 Score=336.24 Aligned_cols=246 Identities=19% Similarity=0.251 Sum_probs=190.9
Q ss_pred Hhhhh--cccccCCCeEEEEEEECC-CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 371 CEDFS--NVIGSSPIGTVYKGTLSN-GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 371 ~~~~~--~~iG~G~~G~Vy~g~~~~-~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
+++|. ++||+|+||.||+|+..+ ++.||+|++....... ......+.+|+.++..++|||||++++++.+.+ .
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~--~ 148 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK--RAETACFREERDVLVNGDSKWITTLHYAFQDDN--N 148 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS--E
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--E
Confidence 34444 889999999999999764 7899999986532111 111234889999999999999999999999877 7
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhh
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~ 527 (664)
.++|||||++|+|.++++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||+|.++.+||+|||+++..
T Consensus 149 ~~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILl~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 149 LYLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSCLKL 225 (437)
T ss_dssp EEEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--eEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence 8999999999999999963 2456999999999999999999999999 999999999999999999999999998754
Q ss_pred hh----------hhhhcccccccC-----CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccc
Q 006019 528 AM----------AEMAATSKKLSS-----APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQF 592 (664)
Q Consensus 528 ~~----------~~~~~~~pe~~~-----~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (664)
.. ....+.+||... ...++.++|||||||++|||+||+.||.. .+..+....++......
T Consensus 226 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~--~~~~~~~~~i~~~~~~~--- 300 (437)
T 4aw2_A 226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA--ESLVETYGKIMNHKERF--- 300 (437)
T ss_dssp CTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHTHHHHC---
T ss_pred ccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC--CChhHHHHhhhhccccc---
Confidence 22 233456777654 45688999999999999999999999943 33344333333211100
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q 006019 593 VDPTLSSFDEEQLETLGELIKSCVRADPEK--RPTMRDIAA 631 (664)
Q Consensus 593 ~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~ 631 (664)
.-|. .......++.+++.+|+..+|++ ||+++|+++
T Consensus 301 ~~p~---~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 301 QFPT---QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CCCS---SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred cCCc---ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 0011 11112356889999999888888 999998876
No 142
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2e-36 Score=325.94 Aligned_cols=238 Identities=17% Similarity=0.265 Sum_probs=183.5
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHh-ccCCCcccceEEEEec--CCCceeEEE
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLS-KVNHKNFVNLIGFCEE--EEPFTRMMV 451 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~--~~~~~~~lV 451 (664)
+.||+|+||.||+|+.. ++..||||++.. ...+.+|++++. ..+||||+++++++.. .+....++|
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~----------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv 137 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc----------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEE
Confidence 67999999999999975 588999999852 135778888874 4589999999999864 122257999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC---CCceEecccCchhhhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE---DYAAKLSDLSFWNEIA 528 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~---~~~~kl~DfGla~~~~ 528 (664)
||||++|+|.+++.......+++..+..|+.+++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 138 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 138 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 99999999999997655567999999999999999999999998 999999999999998 7899999999987653
Q ss_pred h--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCCh--HHHHHHHhcCCCCCccccCCCCC
Q 006019 529 M--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSL--EDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 529 ~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
. ....+.+||......++.++|||||||++|||+||+.||....... .........+.... ..+..
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~---~~~~~- 291 (400)
T 1nxk_A 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF---PNPEW- 291 (400)
T ss_dssp -----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC---CTTTT-
T ss_pred CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC---CCccc-
Confidence 2 1334678998888889999999999999999999999995432210 01111111111111 11111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.....++.+++.+||+.||++||++.|+++.
T Consensus 292 ---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 292 ---SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1233568899999999999999999999874
No 143
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.1e-37 Score=332.30 Aligned_cols=239 Identities=18% Similarity=0.218 Sum_probs=187.8
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEEe
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEY 454 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~Ey 454 (664)
+.||+|+||.||+|+.. ++..+|+|++....... ....+.+.+|+++++.++|||||++++++.+.+ ..++||||
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~--~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~--~~~lV~E~ 150 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK--RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR--YLYMVMEY 150 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh--hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--EEEEEEeC
Confidence 78999999999999976 58899999986522110 011235889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh-----
Q 006019 455 APNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----- 529 (664)
Q Consensus 455 ~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~----- 529 (664)
+++|+|.++++. ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 151 ~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~ 225 (410)
T 3v8s_A 151 MPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225 (410)
T ss_dssp CTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE
T ss_pred CCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc
Confidence 999999999863 35899999999999999999999999 99999999999999999999999999976532
Q ss_pred -----hhhhcccccccCCCC----CCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 530 -----AEMAATSKKLSSAPS----ASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 530 -----~~~~~~~pe~~~~~~----~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
....+.+||...... ++.++|||||||++|||+||+.||.. .+..+....++...... .-+...
T Consensus 226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~--~~~~~~~~~i~~~~~~~---~~p~~~-- 298 (410)
T 3v8s_A 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA--DSLVGTYSKIMNHKNSL---TFPDDN-- 298 (410)
T ss_dssp CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHTHHHHC---CCCTTC--
T ss_pred ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC--CChhhHHHHHHhccccc---cCCCcc--
Confidence 233455777654433 77899999999999999999999943 33444444443321111 011111
Q ss_pred CHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 006019 601 DEEQLETLGELIKSCVRADPEK--RPTMRDIAAI 632 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~--RPs~~ev~~~ 632 (664)
....++.+++.+|++.+|.+ ||++.||++.
T Consensus 299 --~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 299 --DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 12356889999999999988 9999998863
No 144
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.8e-36 Score=306.02 Aligned_cols=238 Identities=19% Similarity=0.271 Sum_probs=190.3
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..||+|++...... ...+.+.+|++++++++||||+++++++.+.+ ..++|+
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 84 (276)
T 2yex_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV----DCPENIKKEICINKMLNHENVVKFYGHRREGN--IQYLFL 84 (276)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT----THHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch----hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC--EEEEEE
Confidence 4588999999999999975 6899999998754432 24577999999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 85 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 85 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EecCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC--eeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 9999999999986 3456999999999999999999999998 99999999999999999999999999875421
Q ss_pred --------hhhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 530 --------AEMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 530 --------~~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
....+.+||....... +.++||||||+++|||+||+.||.........+.. ........ ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~---------~~ 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-WKEKKTYL---------NP 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH-HHTTCTTS---------TT
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-hhhccccc---------Cc
Confidence 1234567887765554 77899999999999999999999644332222211 11111100 01
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.......+.+++.+||+.||++||++.|+++
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1223356889999999999999999998876
No 145
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.9e-37 Score=313.41 Aligned_cols=236 Identities=16% Similarity=0.244 Sum_probs=186.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+.. ++..||+|.+...... .....++.+|+..+.++ +||||+++++++.+.+ ..++|
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~--~~~lv 89 (289)
T 1x8b_A 15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG---SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD--HMLIQ 89 (289)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT---SHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT--EEEEE
T ss_pred hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc---cHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC--eEEEE
Confidence 4488999999999999976 6899999998754332 23457789999999999 9999999999998877 77999
Q ss_pred EEecCCCChhhhhcccC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC-----------------
Q 006019 452 FEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE----------------- 512 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~----------------- 512 (664)
|||+++|+|.+++.... ...+++..+..|+.+++.||+|||+.+ |+||||||+|||++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~ 167 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEC------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeecCCCHHHEEEcCCCCCccccccccccccc
Confidence 99999999999986432 256899999999999999999999998 999999999999984
Q ss_pred --CCceEecccCchhhhhh-----hhhhcccccccCCC-CCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhc
Q 006019 513 --DYAAKLSDLSFWNEIAM-----AEMAATSKKLSSAP-SASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLS 584 (664)
Q Consensus 513 --~~~~kl~DfGla~~~~~-----~~~~~~~pe~~~~~-~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~ 584 (664)
+..+||+|||+++.... ....+.+||..... .++.++|||||||++|||++|+.|+... . .+ .....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~--~~-~~~~~ 242 (289)
T 1x8b_A 168 SNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--D--QW-HEIRQ 242 (289)
T ss_dssp --CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS--H--HH-HHHHT
T ss_pred CCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch--h--HH-HHHHc
Confidence 44799999999876642 23345677766544 5668999999999999999998776221 1 11 11111
Q ss_pred CCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 585 GVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 585 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
+ .....+...+..+.+++.+||+.||++||++.|+++
T Consensus 243 ~----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 243 G----------RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp T----------CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C----------CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 111122223456899999999999999999999875
No 146
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.7e-36 Score=314.40 Aligned_cols=238 Identities=19% Similarity=0.305 Sum_probs=182.5
Q ss_pred cccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEEEE
Q 006019 376 NVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++.++ +||||+++++++.+.+ ..++|||
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~--~~~lv~e 91 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-----HIRSRVFREVEMLYQCQGHRNVLELIEFFEEED--RFYLVFE 91 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS-----CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc-----hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEE
Confidence 5799999999999995 4689999999865432 2346789999999985 7999999999998877 7799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc---eEecccCchhhhhh-
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA---AKLSDLSFWNEIAM- 529 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~---~kl~DfGla~~~~~- 529 (664)
|+++|+|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC--ceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999998643 46899999999999999999999998 999999999999998776 99999999875431
Q ss_pred ---------------hhhhcccccccCC-----CCCCcCCcchhhHHHHHHHHhCCCCccCCCCCh-------------H
Q 006019 530 ---------------AEMAATSKKLSSA-----PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSL-------------E 576 (664)
Q Consensus 530 ---------------~~~~~~~pe~~~~-----~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~-------------~ 576 (664)
....+.+||.... ..++.++|||||||++|||+||+.||....... .
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 1234556665532 346789999999999999999999996432211 1
Q ss_pred HHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 577 DWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 577 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
................ .. ......+.+++.+||+.||++||++.|+++
T Consensus 248 ~~~~~i~~~~~~~~~~---~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQEGKYEFPDK---DW----AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHCCCCCCHH---HH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCcccCch---hc----ccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1111211111110000 00 112356889999999999999999999877
No 147
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.4e-36 Score=325.51 Aligned_cols=234 Identities=20% Similarity=0.240 Sum_probs=185.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+.. +++.+|+|++....... ....+.+.+|..++.++ +|||||++++++.+.+ ..++|
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~--~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--~~~lV 131 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFV 131 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC------CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC--EEEEE
Confidence 3488999999999999975 57899999997654322 12234588899999887 8999999999998877 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh---
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA--- 528 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~--- 528 (664)
|||+++|+|.+++.. ...+++..+..++.+|+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 132 ~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g--ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 999999999998863 356999999999999999999999999 9999999999999999999999999987531
Q ss_pred ------hhhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCC------CChHHHH-HHHhcCCCCCccccCC
Q 006019 529 ------MAEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDN------GSLEDWA-ADYLSGVQPLQQFVDP 595 (664)
Q Consensus 529 ------~~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~------~~~~~~~-~~~~~~~~~~~~~~d~ 595 (664)
..+..+.+||......++.++|||||||++|||+||+.||.... ....+.. ........
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-------- 279 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-------- 279 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--------
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--------
Confidence 12345667888888889999999999999999999999995321 1111222 22222111
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 006019 596 TLSSFDEEQLETLGELIKSCVRADPEKRPTM 626 (664)
Q Consensus 596 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 626 (664)
.++.....++.+++.+||+.||++||++
T Consensus 280 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 ---RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1222334568899999999999999996
No 148
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.6e-36 Score=308.41 Aligned_cols=240 Identities=19% Similarity=0.254 Sum_probs=192.1
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|... ++..||+|++...... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~v~ 84 (284)
T 3kk8_A 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEES--FHYLVF 84 (284)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC---HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC--EEEEEE
Confidence 3478999999999999975 5889999998754432 344567899999999999999999999998776 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc---eEecccCchhhhhh
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA---AKLSDLSFWNEIAM 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~---~kl~DfGla~~~~~ 529 (664)
||+++|+|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999888643 46899999999999999999999999 999999999999987655 99999999865532
Q ss_pred --------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 530 --------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 530 --------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
....+.+||......++.++||||||+++|||++|+.||.. ....+.......+.... ..+....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~--~~~~~~~~~~~~~~~~~---~~~~~~~-- 233 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGAYDY---PSPEWDT-- 233 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCC---CTTTTTT--
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC--CchhHHHHHHHhccccC---Cchhhcc--
Confidence 22345678887777889999999999999999999999943 33333333333221111 1111112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...++.+++.+||+.||++||++.|+++
T Consensus 234 --~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 234 --VTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp --SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2356889999999999999999999987
No 149
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5e-36 Score=308.51 Aligned_cols=242 Identities=23% Similarity=0.341 Sum_probs=189.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecC--CCceeEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEE--EPFTRMM 450 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~~~l 450 (664)
+.+.||+|+||.||+|... ++..||+|.+...... ....+.|.+|++++++++||||+++++++... +....++
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT---KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC---HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3468999999999999974 5788999988754322 34567899999999999999999999998653 1225799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec-CCCceEecccCchhhhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld-~~~~~kl~DfGla~~~~~ 529 (664)
||||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+++|+||||||+|||++ .++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999964 3568999999999999999999999877799999999999998 789999999999875432
Q ss_pred h-------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 A-------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 ~-------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
. ...+.+||... ..++.++||||||+++|||+||+.||... ....+........... .. .+.
T Consensus 185 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~--~~-------~~~ 253 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC-QNAAQIYRRVTSGVKP--AS-------FDK 253 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC-SSHHHHHHHHTTTCCC--GG-------GGG
T ss_pred cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc-CcHHHHHHHHhccCCc--cc-------cCC
Confidence 2 23455777665 45889999999999999999999999432 3333333333322111 01 111
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....++.+++.+||+.||++||++.|+++
T Consensus 254 ~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 254 VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 12246889999999999999999999875
No 150
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.3e-36 Score=314.75 Aligned_cols=241 Identities=17% Similarity=0.216 Sum_probs=192.0
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CCcccceEEEEecCCCceeEEEEE
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.||+|+||.||+|+.. +++.||+|++...... .....++.+|+.++.+++ ||||+++++++...+ ..++|||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~--~~~lv~e 109 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG---QDCRAEILHEIAVLELAKSCPRVINLHEVYENTS--EIILILE 109 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETT---EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc---hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC--eEEEEEE
Confidence 78999999999999975 5899999998754432 223567999999999995 699999999998776 6799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC---CCceEecccCchhhhhhh
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE---DYAAKLSDLSFWNEIAMA 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~---~~~~kl~DfGla~~~~~~ 530 (664)
|+++|+|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g--ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC--eecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 999999999987555678999999999999999999999998 999999999999998 789999999998765322
Q ss_pred --------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 531 --------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 531 --------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
...+.+||......++.++||||||+++|||+||+.||... ...+............ ..+. ..
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~---~~~~----~~ 258 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE--DNQETYLNISQVNVDY---SEET----FS 258 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHTCCCC---CTTT----TT
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CchHHHHHHHhccccc---Cchh----hc
Confidence 33456788888888899999999999999999999999432 2222222222211111 1111 12
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.....+.+++.+||+.||++||++.++++.
T Consensus 259 ~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 259 SVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 233568899999999999999999998763
No 151
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.8e-36 Score=311.04 Aligned_cols=238 Identities=16% Similarity=0.241 Sum_probs=192.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..+|+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 94 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVL 94 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC--HHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--EEEEEE
Confidence 3478999999999999976 47889999987544322 345677999999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++++|.+++.. ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 95 e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 95 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp ECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 99999999998753 346899999999999999999999998 999999999999999999999999998765311
Q ss_pred -------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 531 -------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 531 -------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
...+.+||......++.++||||||+++|||+||+.||.. ....+........... .+..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--~~~~~~~~~~~~~~~~-----------~~~~ 237 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET--SCLKETYLRIKKNEYS-----------IPKH 237 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHTTCCC-----------CCTT
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHhhccCC-----------Cccc
Confidence 2235567777777788999999999999999999999943 3333333332222111 1122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
....+.+++.+||+.||++||++.|+++.
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 238 INPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 23568899999999999999999999874
No 152
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.5e-36 Score=318.09 Aligned_cols=247 Identities=21% Similarity=0.296 Sum_probs=193.6
Q ss_pred hhhcccccCCCeEEEEEEE------CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc
Q 006019 373 DFSNVIGSSPIGTVYKGTL------SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF 446 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~------~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 446 (664)
.+.+.||+|+||.||+|++ .++..||||.+.... ......+|.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC----SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp EEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred EEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc----chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 3458899999999999984 246789999985321 2345568999999999999999999999998876
Q ss_pred eeEEEEEecCCCChhhhhcccC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC---CCceEe
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKE-----SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE---DYAAKL 518 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~-----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~---~~~~kl 518 (664)
..++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ |+||||||+|||++. +..+||
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~--i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC--eecCcCCHhHEEEecCCCcceEEE
Confidence 5699999999999999997542 245899999999999999999999998 999999999999994 456999
Q ss_pred cccCchhhhhhh-----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCC
Q 006019 519 SDLSFWNEIAMA-----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGV 586 (664)
Q Consensus 519 ~DfGla~~~~~~-----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~ 586 (664)
+|||+++..... ...+.+||......++.++||||||+++|||+| |+.||.. ....+.........
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~--~~~~~~~~~~~~~~ 262 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS--KSNQEVLEFVTSGG 262 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--CCHHHHHHHHHTTC
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC--cCHHHHHHHHhcCC
Confidence 999998755321 224567787766778999999999999999999 9999843 23333333332221
Q ss_pred CCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 587 QPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 587 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
. ...+..++..+.+++.+||+.||++||++.++++.|+.+...
T Consensus 263 ~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 263 R----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 1 111222345688999999999999999999999999988653
No 153
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.6e-36 Score=311.27 Aligned_cols=237 Identities=16% Similarity=0.286 Sum_probs=191.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..||+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 93 (284)
T 2vgo_A 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK--EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK--RIYLML 93 (284)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch--HHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC--EEEEEE
Confidence 4488999999999999975 57889999986532211 123467999999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++... ..+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 94 EFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred EeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999999998643 46899999999999999999999998 99999999999999999999999998865432
Q ss_pred ----hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHH
Q 006019 530 ----AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQL 605 (664)
Q Consensus 530 ----~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 605 (664)
....+.+||......++.++||||||+++|||+||+.||.. ....+.......... .++....
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--~~~~~~~~~~~~~~~-----------~~~~~~~ 236 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS--PSHTETHRRIVNVDL-----------KFPPFLS 236 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHTTCC-----------CCCTTSC
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC--CCHhHHHHHHhcccc-----------CCCCcCC
Confidence 23345678887777889999999999999999999999943 233333333322211 1122233
Q ss_pred HHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 606 ETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 606 ~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+.+++.+||+.||++||++.++++
T Consensus 237 ~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 237 DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 56889999999999999999999986
No 154
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7.3e-37 Score=322.41 Aligned_cols=236 Identities=19% Similarity=0.247 Sum_probs=190.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+.. +|+.||+|++....... ....+.+..|.+++..+ +||||+++++++.+.+ ..++|
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--~~~lv 96 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM--DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--NLFFV 96 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh--hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--EEEEE
Confidence 3488999999999999975 58899999997543111 11245678899999887 9999999999998877 77999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 97 MEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence 999999999999864 346899999999999999999999998 99999999999999999999999999875421
Q ss_pred -------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 -------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
....+.+||......++.++|||||||++|||+||+.||.. .+..+........... ++.
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--~~~~~~~~~i~~~~~~-----------~p~ 239 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG--QDEEELFHSIRMDNPF-----------YPR 239 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCC-----------CCT
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC--CCHHHHHHHHHhCCCC-----------CCc
Confidence 23456678887777889999999999999999999999943 3334444443332111 122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMR-DIA 630 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~-ev~ 630 (664)
....++.+++.+||+.||++||++. ++.
T Consensus 240 ~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 240 WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 2335688999999999999999997 554
No 155
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.5e-37 Score=334.96 Aligned_cols=237 Identities=18% Similarity=0.221 Sum_probs=184.8
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|..||||++....... ......+.+|++++++++||||+++++++...+ ..++||
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~ 227 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--RLCFVM 227 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC---------------CCCCCSCTTSCCEEEEEEETT--EEEEEE
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh--hHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC--EEEEEE
Confidence 3488999999999999964 68999999997543221 223456889999999999999999999999877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
||+++|+|.+++.. ...+++..+..++.+++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 228 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 228 EYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp CCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred eeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC--EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 99999999999863 3468999999999999999999997 88 99999999999999999999999999876421
Q ss_pred -------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 -------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
....+.+||......++.++|||||||++|||+||+.||.. ....+........... ++.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--~~~~~~~~~i~~~~~~-----------~p~ 370 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--QDHEKLFELILMEEIR-----------FPR 370 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCC-----------CCT
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC--CCHHHHHHHHHhCCCC-----------CCc
Confidence 23456678887778899999999999999999999999943 3334444443332211 122
Q ss_pred HHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRP-----TMRDIAA 631 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 631 (664)
....++.+++.+||+.||++|| +++|+++
T Consensus 371 ~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 2335688999999999999999 9999875
No 156
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.4e-36 Score=316.74 Aligned_cols=234 Identities=20% Similarity=0.242 Sum_probs=187.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+.. +++.+|+|++....... ....+.+.+|+.++.++ +|||||++++++...+ ..++|
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv 88 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND--DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--RLFFV 88 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc--hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC--EEEEE
Confidence 3488999999999999975 58899999997654332 34456788999999988 8999999999998876 77999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh---
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA--- 528 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~--- 528 (664)
|||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 999999999999863 346899999999999999999999998 9999999999999999999999999987532
Q ss_pred ------hhhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC------ChHHHH-HHHhcCCCCCccccCC
Q 006019 529 ------MAEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWA-ADYLSGVQPLQQFVDP 595 (664)
Q Consensus 529 ------~~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~------~~~~~~-~~~~~~~~~~~~~~d~ 595 (664)
.....+.+||......++.++|||||||++|||+||+.||..... ...+.. ........
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-------- 236 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-------- 236 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC--------
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC--------
Confidence 123456678888777889999999999999999999999953211 111222 22221111
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 006019 596 TLSSFDEEQLETLGELIKSCVRADPEKRPTM 626 (664)
Q Consensus 596 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 626 (664)
.++.....++.+++.+||+.||++||++
T Consensus 237 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 ---RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1222334568899999999999999995
No 157
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.8e-36 Score=315.41 Aligned_cols=252 Identities=20% Similarity=0.313 Sum_probs=195.8
Q ss_pred HHHHhhhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhc--cCCCcccceEEEEecCCC
Q 006019 368 EAACEDFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSK--VNHKNFVNLIGFCEEEEP 445 (664)
Q Consensus 368 ~~~~~~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~~ 445 (664)
......+.+.||+|+||.||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++.....
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--------EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 334445568999999999999998 5889999998532 24568889999887 789999999999987542
Q ss_pred --ceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCeEEeCcCCCCeEecCCCc
Q 006019 446 --FTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH--------QLNPPIAHNYLNSSAVHLTEDYA 515 (664)
Q Consensus 446 --~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH--------~~~~~ivHrDLk~~NILld~~~~ 515 (664)
...++||||+++|+|.+++.. ..+++..+..++.+++.||+||| +.+ |+||||||+|||++.++.
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE--EECSCCSGGGEEECTTSC
T ss_pred ccceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC--eeeCCCCHHHEEECCCCC
Confidence 146899999999999999963 35899999999999999999999 666 999999999999999999
Q ss_pred eEecccCchhhhhhh-------------hhhcccccccCCC------CCCcCCcchhhHHHHHHHHhC----------CC
Q 006019 516 AKLSDLSFWNEIAMA-------------EMAATSKKLSSAP------SASLESNVYNFGVLLFEMVTG----------RL 566 (664)
Q Consensus 516 ~kl~DfGla~~~~~~-------------~~~~~~pe~~~~~------~~s~ksDVySfGvvl~El~tG----------~~ 566 (664)
+||+|||+++..... ...+.+||..... .++.++|||||||++|||+|| +.
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 999999998755322 2345567765543 233689999999999999999 77
Q ss_pred CccCCC---CChHHHHHHHhcCCCCCccccCCCCCC--CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 567 PYLVDN---GSLEDWAADYLSGVQPLQQFVDPTLSS--FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 567 P~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
||.... .....+....... ...+.+.. ...++...+.+++.+||+.||++||++.+|++.|+++.+.
T Consensus 266 p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTS------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CccccCcCcccHHHHHHHHHHH------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 874321 2233333332221 11122211 1346677899999999999999999999999999998754
No 158
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=313.95 Aligned_cols=247 Identities=19% Similarity=0.209 Sum_probs=188.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|..||+|++..... .....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 81 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED---DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR--RLHLVF 81 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc---chHHHHHHHHHHHHHHhCCCCCccchhheeecCC--eEEEEE
Confidence 3478999999999999975 589999998864332 2344677899999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++++|.++++ ....+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 82 e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 9999999998875 3456899999999999999999999998 99999999999999999999999999875431
Q ss_pred ------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHH---hcC-----------CCC
Q 006019 530 ------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADY---LSG-----------VQP 588 (664)
Q Consensus 530 ------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~---~~~-----------~~~ 588 (664)
....+.+||.... ..++.++||||||+++|||+||+.||.... ..+..... ... ...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS--DVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhcccccccccccccccc
Confidence 2234567776644 567899999999999999999999995322 11111111 100 000
Q ss_pred Cc--cccCCCCC-C---CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 589 LQ--QFVDPTLS-S---FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 589 ~~--~~~d~~~~-~---~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.. .+.++... . ..+.....+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 00111000 0 00123456889999999999999999999986
No 159
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6.8e-36 Score=309.77 Aligned_cols=240 Identities=17% Similarity=0.253 Sum_probs=191.2
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
..+.+.||+|+||.||+++.. +|+.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~l 83 (304)
T 2jam_A 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-----FRDSSLENEIAVLKKIKHENIVTLEDIYESTT--HYYL 83 (304)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-----cchHHHHHHHHHHHhCCCCCeeehhhhcccCC--EEEE
Confidence 345589999999999999975 689999999874332 12356889999999999999999999998876 6799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe---cCCCceEecccCchhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL---TEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl---d~~~~~kl~DfGla~~~ 527 (664)
||||+++|+|.+++... ..+++.....++.+++.||+|||+.+ ++||||||+||++ ++++.+||+|||+++..
T Consensus 84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 84 VMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp EECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 99999999999988643 46899999999999999999999998 9999999999999 78899999999998754
Q ss_pred hh-------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCC
Q 006019 528 AM-------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 528 ~~-------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
.. ....+.+||......++.++||||||+++|||+||+.||.. ....+.......+..... .+ .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--~~~~~~~~~i~~~~~~~~---~~----~ 230 (304)
T 2jam_A 160 QNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE--ETESKLFEKIKEGYYEFE---SP----F 230 (304)
T ss_dssp CCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHCCCCCC---TT----T
T ss_pred CCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHcCCCCCC---cc----c
Confidence 32 23346678888888889999999999999999999999943 223333333333211111 11 1
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+..+.+++.+||+.||++||++.++++
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 231 WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1223356889999999999999999999986
No 160
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.9e-36 Score=310.83 Aligned_cols=248 Identities=15% Similarity=0.185 Sum_probs=190.6
Q ss_pred hhhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
.+.+.||+|+||.||+|+. .+++.||||++...... .++.+|++++++++|++++..++++...+. ..++|
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv 83 (296)
T 4hgt_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMV 83 (296)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-------CCHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEE
T ss_pred EEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-------hHHHHHHHHHHHhcCCCCCCeeeeecCCCC-ceEEE
Confidence 3458899999999999996 57889999987544322 358889999999999998888877754432 67999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe---cCCCceEecccCchhhhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL---TEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl---d~~~~~kl~DfGla~~~~ 528 (664)
|||+ +|+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++...
T Consensus 84 ~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 9999999863 3456999999999999999999999999 9999999999999 789999999999987653
Q ss_pred h----------------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC-ChHHHHHHHhcCC-CCCc
Q 006019 529 M----------------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG-SLEDWAADYLSGV-QPLQ 590 (664)
Q Consensus 529 ~----------------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~-~~~~~~~~~~~~~-~~~~ 590 (664)
. ....+.+||......++.++|||||||++|||+||+.||..... ...+......... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence 2 12345577877777889999999999999999999999953221 1111111111000 0000
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 591 QFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 591 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
... ....+..+.+++.+||+.||++||++.++++.|+++...
T Consensus 240 ~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 240 EVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhh-------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 000 011235689999999999999999999999999999764
No 161
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.2e-38 Score=325.01 Aligned_cols=246 Identities=20% Similarity=0.326 Sum_probs=176.8
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhc--cCCCcccceEEEEecCCCc--eeE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSK--VNHKNFVNLIGFCEEEEPF--TRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~~~--~~~ 449 (664)
+.+.||+|+||.||+|+.. +..||||++... ....+.+|.+++.. ++||||+++++++...... ..+
T Consensus 7 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR--------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp CCEEEEECSSSEEEEC-CT-TSCEEEEECC-T--------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ehhhccCCCCeEEEEEEEc-CcceEEEEeccc--------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 4588999999999999874 889999987532 23567888888887 7999999999999875421 468
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCeEEeCcCCCCeEecCCCceEeccc
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH--------QLNPPIAHNYLNSSAVHLTEDYAAKLSDL 521 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH--------~~~~~ivHrDLk~~NILld~~~~~kl~Df 521 (664)
+||||+++|+|.+++.. ..+++..+.+++.+++.||+||| +.+ |+||||||+|||++.++.+||+||
T Consensus 78 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~--ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA--IAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEECCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC---CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EEEeccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC--EeeCcCCHHHeEECCCCCEEEeec
Confidence 99999999999999953 35788889999999999999999 777 999999999999999999999999
Q ss_pred Cchhhhhh-------------hhhhcccccccCCC------CCCcCCcchhhHHHHHHHHhC----------CCCccCCC
Q 006019 522 SFWNEIAM-------------AEMAATSKKLSSAP------SASLESNVYNFGVLLFEMVTG----------RLPYLVDN 572 (664)
Q Consensus 522 Gla~~~~~-------------~~~~~~~pe~~~~~------~~s~ksDVySfGvvl~El~tG----------~~P~~~~~ 572 (664)
|+++.... ....+.+||..... .++.++|||||||++|||+|| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 99865432 23345677766544 334689999999999999999 66663211
Q ss_pred ---CChHHHHHHHhcCCCCCccccCCCCCC--CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 573 ---GSLEDWAADYLSGVQPLQQFVDPTLSS--FDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 573 ---~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
....+........ ...+.... ...+++..+.+++.+||+.||++|||+.+|++.|+++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 233 PSDPSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp C-CCCCC-CHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred CCCccHHHHHHHHHHh------hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 1111111111111 11111111 1235677899999999999999999999999999998764
No 162
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.9e-36 Score=309.98 Aligned_cols=245 Identities=16% Similarity=0.205 Sum_probs=191.4
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .+++.||||++...... +++.+|++++++++|++++..++++...+. ..++||
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~~~lv~ 84 (296)
T 3uzp_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGD-YNVMVM 84 (296)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-------CHHHHHHHHHHHHTTSTTCCCEEEEEEETT-EEEEEE
T ss_pred EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-------hHHHHHHHHHHHhhcCCCCCccccccCCCC-ceEEEE
Confidence 347899999999999996 57899999988654322 358899999999999998887777754432 579999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe---cCCCceEecccCchhhhhh
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL---TEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl---d~~~~~kl~DfGla~~~~~ 529 (664)
||+ +|+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN--FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 9999999863 3456999999999999999999999998 9999999999999 5889999999999876532
Q ss_pred h----------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC-C---hHH-HHHHHhcCCCC
Q 006019 530 A----------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG-S---LED-WAADYLSGVQP 588 (664)
Q Consensus 530 ~----------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~-~---~~~-~~~~~~~~~~~ 588 (664)
. ...+.+||......++.++|||||||++|||+||+.||..... . ... ........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--- 237 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST--- 237 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS---
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC---
Confidence 2 2234567777777889999999999999999999999953221 1 111 11111110
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 589 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 589 ~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
..... ....+.++.+++.+||+.||++||++.+|++.|+++....
T Consensus 238 ~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 238 PIEVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp CHHHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred chHHH-------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 00000 1112356899999999999999999999999999987643
No 163
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7.7e-37 Score=314.42 Aligned_cols=247 Identities=21% Similarity=0.313 Sum_probs=187.4
Q ss_pred hhcccccCCCeEEEEEEEC--CCc--EEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS--NGV--EIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~--~~~--~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.||+|+||.||+|++. ++. .||||++....... ....+.|.+|++++++++||||+++++++.... .+
T Consensus 22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~ 96 (291)
T 1u46_A 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ--PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP---MK 96 (291)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---CE
T ss_pred eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---ce
Confidence 4578999999999999863 233 68898886543222 245678999999999999999999999997654 58
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+|+||+++|+|.+++... ...+++..+.+++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC--cccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999998643 356899999999999999999999998 99999999999999999999999999876532
Q ss_pred h------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 530 A------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 530 ~------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
. ...+.+||......++.++||||||+++|||+| |+.||.. ....+............
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--~~~~~~~~~~~~~~~~~------- 244 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG--LNGSQILHKIDKEGERL------- 244 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHTSCCCC-------
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc--CCHHHHHHHHHccCCCC-------
Confidence 1 123567777666667889999999999999999 9999943 33344443333221111
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCC
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGI 639 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~ 639 (664)
..+...+..+.+++.+||+.||++||++.++++.|+++...
T Consensus 245 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 245 --PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred --CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 11223345789999999999999999999999999988653
No 164
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=320.32 Aligned_cols=238 Identities=19% Similarity=0.260 Sum_probs=185.3
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCC--CcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNH--KNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||++...++..||||++..... .....+.|.+|++++++++| +||+++++++...+ ..++|
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv 87 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA---DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMV 87 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc---chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC--EEEEE
Confidence 4578999999999999988899999999875432 23445789999999999987 99999999998877 77999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh-
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA- 530 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~- 530 (664)
|| +.+|+|.+++.. ...+++..+..|+.+++.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 88 ~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~--iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 468899999974 356899999999999999999999998 99999999999997 678999999999765321
Q ss_pred ----------hhhcccccccCC-----------CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCC
Q 006019 531 ----------EMAATSKKLSSA-----------PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL 589 (664)
Q Consensus 531 ----------~~~~~~pe~~~~-----------~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~ 589 (664)
...+.+||.... ..++.++|||||||++|||+||+.||...... .............
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~- 239 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLHAIIDPNHE- 239 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHHHHHCTTSC-
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-HHHHHHHhcCCcc-
Confidence 223456775432 56788999999999999999999999532222 2222222211110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 590 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 590 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
..++......+.+++.+||+.||++|||+.|+++.
T Consensus 240 --------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 240 --------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp --------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 01122223568899999999999999999999864
No 165
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.7e-36 Score=317.41 Aligned_cols=238 Identities=16% Similarity=0.241 Sum_probs=192.1
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+++.. ++..+|+|.+....... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 120 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGFHGFFEDND--FVFVVL 120 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--eEEEEE
Confidence 3478999999999999975 47889999987544322 345677999999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++++|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 121 ELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp CCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred ecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 99999999998863 346899999999999999999999998 999999999999999999999999998765321
Q ss_pred -------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 531 -------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 531 -------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
...+.+||......++.++||||||+++|||+||+.||.. ....+........... .+..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--~~~~~~~~~~~~~~~~-----------~~~~ 263 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET--SCLKETYLRIKKNEYS-----------IPKH 263 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHHTCCC-----------CCTT
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC--CCHHHHHHHHhcCCCC-----------CCcc
Confidence 2235567776667788999999999999999999999943 3333333332222111 1122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
....+.+++.+||+.||++||++.|+++.
T Consensus 264 ~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 264 INPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 23568899999999999999999999873
No 166
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=320.24 Aligned_cols=234 Identities=18% Similarity=0.247 Sum_probs=186.7
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCC---chhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDW---PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
+.+.||+|+||.||+|+. .++..||||++........ .....+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~--~~~ 105 (335)
T 3dls_A 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG--FFQ 105 (335)
T ss_dssp EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS--EEE
T ss_pred EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC--EEE
Confidence 347899999999999995 4688999999976542211 0112345788999999999999999999998877 679
Q ss_pred EEEEecCCC-ChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 450 MVFEYAPNG-TLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 450 lV~Ey~~~G-sL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
+||||+..| +|.+++. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 106 lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 181 (335)
T 3dls_A 106 LVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181 (335)
T ss_dssp EEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC--eEEeccCHHHEEEcCCCcEEEeecccceECC
Confidence 999999877 9999886 3456999999999999999999999998 9999999999999999999999999987653
Q ss_pred hh--------hhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 529 MA--------EMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 529 ~~--------~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
.. ...+.+||......+ +.++|||||||++|||+||+.||.... ... .... .
T Consensus 182 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~----------~~~~-~ 242 (335)
T 3dls_A 182 RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE--------ETV----------EAAI-H 242 (335)
T ss_dssp TTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG--------GGT----------TTCC-C
T ss_pred CCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH--------HHH----------hhcc-C
Confidence 22 345667887666555 789999999999999999999993210 000 0000 0
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.+.....++.+++.+||+.||++||++.++++.
T Consensus 243 ~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111123568899999999999999999999874
No 167
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=319.91 Aligned_cols=240 Identities=15% Similarity=0.227 Sum_probs=192.3
Q ss_pred hhcccccCCCeEEEEEE------ECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC---CCcccceEEEEecCC
Q 006019 374 FSNVIGSSPIGTVYKGT------LSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN---HKNFVNLIGFCEEEE 444 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~------~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~ 444 (664)
+.+.||+|+||.||+|+ ..+++.||||++... ...++..|++++.+++ |+||+++++++...+
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 34789999999999994 456889999998532 2356888888888887 999999999998877
Q ss_pred CceeEEEEEecCCCChhhhhccc---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC---------
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIK---ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE--------- 512 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~---~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~--------- 512 (664)
..++||||+++|+|.++++.. ....++|..+..|+.+++.||+|||+++ |+||||||+|||++.
T Consensus 141 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 141 --GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE--IIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp --CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCSGGGEEECGGGTCC----
T ss_pred --CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC--eecCCCCHHHEEecccccCccccc
Confidence 679999999999999998632 3467999999999999999999999998 999999999999998
Q ss_pred --CCceEecccCchhhhhh-----------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHH
Q 006019 513 --DYAAKLSDLSFWNEIAM-----------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWA 579 (664)
Q Consensus 513 --~~~~kl~DfGla~~~~~-----------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~ 579 (664)
++.+||+|||+++.... .+..+.+||......++.++|||||||++|||+||+.||......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~----- 291 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG----- 291 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-----
Confidence 89999999999965421 234556788888888999999999999999999999998422110
Q ss_pred HHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHhhhCCCCC
Q 006019 580 ADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKR-PTMRDIAAILREITGITPD 642 (664)
Q Consensus 580 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Ps~~ev~~~L~~i~~~~~~ 642 (664)
.......+...+ ..+.+.+++..|++.+|.+| |+++++.+.|+++.....+
T Consensus 292 ----------~~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~ 343 (365)
T 3e7e_A 292 ----------ECKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343 (365)
T ss_dssp ----------EEEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred ----------ceeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence 000111111111 13467789999999999998 7899999999998876443
No 168
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3e-36 Score=320.14 Aligned_cols=245 Identities=19% Similarity=0.250 Sum_probs=189.2
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-----CCcccceEEEEecCCCce
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-----HKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----H~niv~l~g~~~~~~~~~ 447 (664)
+.+.||+|+||.||+|+. .++..||||++... ....+.+..|++++++++ |||||++++++...+ .
T Consensus 39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~--~ 110 (360)
T 3llt_A 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI------KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD--H 110 (360)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT--E
T ss_pred EEEEEcccCCeEEEEEEECCCCeEEEEEEeccc------hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC--e
Confidence 448899999999999997 46889999998521 234567888999999997 999999999998877 7
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC---------------
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE--------------- 512 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~--------------- 512 (664)
.++||||+ +|+|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+|||++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS--LTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCcccEEEccccccccccchhcccc
Confidence 79999999 999999997666567999999999999999999999998 999999999999986
Q ss_pred ----------CCceEecccCchhhhhh------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChH
Q 006019 513 ----------DYAAKLSDLSFWNEIAM------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLE 576 (664)
Q Consensus 513 ----------~~~~kl~DfGla~~~~~------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~ 576 (664)
++.+||+|||+++.... ....+.+||......++.++|||||||++|||+||+.||.... ..
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~ 265 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE--HM 265 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HH
T ss_pred cccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc--HH
Confidence 78999999999875532 2345678888888889999999999999999999999995322 11
Q ss_pred HHHHHHhcCCCCC-------------ccccC--------CCCCC--------------CCHHHHHHHHHHHHHhccCCCC
Q 006019 577 DWAADYLSGVQPL-------------QQFVD--------PTLSS--------------FDEEQLETLGELIKSCVRADPE 621 (664)
Q Consensus 577 ~~~~~~~~~~~~~-------------~~~~d--------~~~~~--------------~~~~~~~~l~~l~~~Cl~~~P~ 621 (664)
+............ ....+ +.... ........+.+++.+||+.||+
T Consensus 266 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 345 (360)
T 3llt_A 266 EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPT 345 (360)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChh
Confidence 2111111100000 00000 00000 0000115678999999999999
Q ss_pred CCCCHHHHHH
Q 006019 622 KRPTMRDIAA 631 (664)
Q Consensus 622 ~RPs~~ev~~ 631 (664)
+|||+.|+++
T Consensus 346 ~Rpta~elL~ 355 (360)
T 3llt_A 346 LRPSPAELLK 355 (360)
T ss_dssp GSCCHHHHTT
T ss_pred hCCCHHHHhc
Confidence 9999999874
No 169
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.6e-36 Score=321.50 Aligned_cols=239 Identities=19% Similarity=0.225 Sum_probs=183.1
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHH-HhccCCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDT-LSKVNHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+.. ++..+|+|++....... ....+.+.+|..+ ++.++|||||++++++...+ ..++|
T Consensus 42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~--~~~lv 117 (373)
T 2r5t_A 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK--KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--KLYFV 117 (373)
T ss_dssp EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh--hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC--EEEEE
Confidence 4588999999999999975 57889999997654322 2234567777776 57789999999999998877 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|||+++|+|.+++.. ...+++.....++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 118 LDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 999999999999863 346889999999999999999999999 99999999999999999999999999986421
Q ss_pred -------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 -------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
....+.+||......++.++|||||||++|||+||+.||. ..+..+....++..... ++.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~--~~~~~~~~~~i~~~~~~-----------~~~ 260 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY--SRNTAEMYDNILNKPLQ-----------LKP 260 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC--CSBHHHHHHHHHHSCCC-----------CCS
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCC--CCCHHHHHHHHHhcccC-----------CCC
Confidence 1234567887777788999999999999999999999994 33344444444433111 112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTMRDIAAIL 633 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 633 (664)
.....+.+++.+||+.||++||++.+.++.+
T Consensus 261 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 261 NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 2235688999999999999999986544443
No 170
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.6e-37 Score=332.28 Aligned_cols=235 Identities=12% Similarity=0.196 Sum_probs=179.4
Q ss_pred hcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHH---HHHhccCCCcccceE-------EEEecC
Q 006019 375 SNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKI---DTLSKVNHKNFVNLI-------GFCEEE 443 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~~~~~ 443 (664)
.+.||+|+||.||+|+. .+|+.||||++....... ....+.|.+|+ +.+++++|||||+++ +++...
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~ 155 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 155 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC--TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECT
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc--hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhcc
Confidence 47899999999999996 568999999997543322 23457899999 556666899999998 665544
Q ss_pred CC---------------ceeEEEEEecCCCChhhhhcccC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCc
Q 006019 444 EP---------------FTRMMVFEYAPNGTLFEHIHIKE-----SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYL 503 (664)
Q Consensus 444 ~~---------------~~~~lV~Ey~~~GsL~~~l~~~~-----~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDL 503 (664)
+. ...++||||+ +|+|.+++.... ...++|..+..|+.+++.||+|||+.+ |+||||
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDi 232 (377)
T 3byv_A 156 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYL 232 (377)
T ss_dssp TSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT--EECSCC
T ss_pred CCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC--eecCCC
Confidence 21 0268999999 689999986421 223557889999999999999999998 999999
Q ss_pred CCCCeEecCCCceEecccCchhhhhhh-----hhhcccccccCCC-----------CCCcCCcchhhHHHHHHHHhCCCC
Q 006019 504 NSSAVHLTEDYAAKLSDLSFWNEIAMA-----EMAATSKKLSSAP-----------SASLESNVYNFGVLLFEMVTGRLP 567 (664)
Q Consensus 504 k~~NILld~~~~~kl~DfGla~~~~~~-----~~~~~~pe~~~~~-----------~~s~ksDVySfGvvl~El~tG~~P 567 (664)
||+|||++.++.+||+|||+++..... ...+.+||..... .++.++|||||||++|||+||+.|
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P 312 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP 312 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred CHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998864321 1456678776655 689999999999999999999999
Q ss_pred ccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 568 YLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
|..... ......+.. ..... +..+.+++.+||+.||++||++.++++
T Consensus 313 f~~~~~------------~~~~~~~~~-~~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 313 ITKDAA------------LGGSEWIFR-SCKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp C------------------CCSGGGGS-SCCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred Cccccc------------ccchhhhhh-hccCC----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 942210 011111111 11122 356889999999999999999999986
No 171
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.8e-36 Score=310.59 Aligned_cols=247 Identities=19% Similarity=0.263 Sum_probs=186.7
Q ss_pred hcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 375 SNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
.+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e 82 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTEN--KLYLVFE 82 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC-----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc---hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC--ceEEEEE
Confidence 478999999999999975 6899999998654322 122357889999999999999999999998877 6799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh---
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA--- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~--- 530 (664)
|++ |+|.+++.......+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 998 69999987665567999999999999999999999998 999999999999999999999999998765321
Q ss_pred ------hhhcccccccCCCC-CCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccc----------c
Q 006019 531 ------EMAATSKKLSSAPS-ASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQF----------V 593 (664)
Q Consensus 531 ------~~~~~~pe~~~~~~-~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 593 (664)
...+.+||...... ++.++||||||+++|||+||+.||... ...+............... .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (299)
T 2r3i_A 160 YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD--SEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237 (299)
T ss_dssp TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc--cHHHHHHHHHHHhCCCchhhhhHhhcCccc
Confidence 22345677665543 788999999999999999999999532 2222222222110000000 0
Q ss_pred CCCCCC--------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 594 DPTLSS--------FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 594 d~~~~~--------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.+.... .......++.+++.+||+.||++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 001100 01123457889999999999999999999887
No 172
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.4e-36 Score=318.29 Aligned_cols=237 Identities=18% Similarity=0.186 Sum_probs=190.9
Q ss_pred hhcccccCCCeEEEEEEECC-CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSN-GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~-~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+... ++.||+|++....... ....+.+..|..++..+ +||||+++++++...+ ..++|
T Consensus 24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--~~~lv 99 (353)
T 2i0e_A 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFV 99 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH--TTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc--chHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC--EEEEE
Confidence 44889999999999999764 7899999987543211 12345688999999988 8999999999998876 78999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|||+++|+|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g--ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--EEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 9999999999998643 46899999999999999999999998 99999999999999999999999999875321
Q ss_pred -------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 -------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
....+.+||......++.++|||||||++|||++|+.||.. .+..+....+...... ++.
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--~~~~~~~~~i~~~~~~-----------~p~ 242 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVA-----------YPK 242 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCC-----------CCT
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC--CCHHHHHHHHHhCCCC-----------CCC
Confidence 23456678887777889999999999999999999999943 3444444444433111 122
Q ss_pred HHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 006019 603 EQLETLGELIKSCVRADPEKRPT-----MRDIAA 631 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs-----~~ev~~ 631 (664)
....++.+++.+||+.||++||+ ++++.+
T Consensus 243 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 243 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 23456889999999999999996 455553
No 173
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.2e-36 Score=320.65 Aligned_cols=238 Identities=20% Similarity=0.268 Sum_probs=186.0
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC--CCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN--HKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|...++..||||++..... .....+.|.+|+++|++++ |||||++++++...+ ..++|
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv 134 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA---DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMV 134 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc---cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC--EEEEE
Confidence 4578999999999999988899999999875432 2345678999999999996 599999999998877 67999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|| +.+|+|.+++... ..+++..+..|+.+|+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++....
T Consensus 135 ~E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EE-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred Ee-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 99 5688999998743 47899999999999999999999998 99999999999996 58999999999976532
Q ss_pred ---------hhhhcccccccCC-----------CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCC
Q 006019 530 ---------AEMAATSKKLSSA-----------PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL 589 (664)
Q Consensus 530 ---------~~~~~~~pe~~~~-----------~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~ 589 (664)
....+.+||.... ..++.++|||||||++|||+||+.||.... .........+......
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-~~~~~~~~~~~~~~~~ 287 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-NQISKLHAIIDPNHEI 287 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-CHHHHHHHHHCTTSCC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-HHHHHHHHHhCccccC
Confidence 2234567776533 368889999999999999999999995322 2222222332221110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 590 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 590 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.++......+.+++.+||+.||++||++.|+++.
T Consensus 288 ---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 288 ---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111123568899999999999999999999864
No 174
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=330.65 Aligned_cols=240 Identities=19% Similarity=0.226 Sum_probs=186.4
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEEe
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEY 454 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~Ey 454 (664)
+.||+|+||.||+++.. +|+.||+|++....... ....+.+.+|++++.+++||||+++++++.+.+ ..++||||
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~--~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~--~~~lVmE~ 142 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK--RGEVSCFREERDVLVNGDRRWITQLHFAFQDEN--YLYLVMEY 142 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--HGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--HHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC--EEEEEEcC
Confidence 78999999999999975 68999999986432111 112245889999999999999999999998877 78999999
Q ss_pred cCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh-----
Q 006019 455 APNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM----- 529 (664)
Q Consensus 455 ~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~----- 529 (664)
+++|+|.+++... ...+++..+..++.+|+.||+|||+.+ |+||||||+|||+|.++.+||+|||+++....
T Consensus 143 ~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g--iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~ 219 (412)
T 2vd5_A 143 YVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219 (412)
T ss_dssp CCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE
T ss_pred CCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecccCHHHeeecCCCCEEEeechhheeccCCCccc
Confidence 9999999999632 346999999999999999999999998 99999999999999999999999999876532
Q ss_pred -----hhhhcccccccC-------CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 530 -----AEMAATSKKLSS-------APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 530 -----~~~~~~~pe~~~-------~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
....+.+||... ...++.++|||||||++|||+||+.||.. .+..+....+....... ..+
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~~---~~p-- 292 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA--DSTAETYGKIVHYKEHL---SLP-- 292 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC--SSHHHHHHHHHTHHHHC---CCC--
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC--CCHHHHHHHHHhcccCc---CCC--
Confidence 233456677654 35678999999999999999999999943 33333333333211000 001
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCC---CCHHHHHH
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKR---PTMRDIAA 631 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~R---Ps~~ev~~ 631 (664)
..+...+.++.+++.+||. +|++| |+++|+.+
T Consensus 293 -~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 293 -LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1112233568999999998 99998 58888765
No 175
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.9e-36 Score=335.15 Aligned_cols=240 Identities=18% Similarity=0.231 Sum_probs=193.6
Q ss_pred hcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 375 SNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
.+.||+|+||.||+|+.. +|..||+|++....... ......+.+|+++|++++|||||++++++.+.+ ..++|||
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE 264 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--RKGEAMALNEKQILEKVNSRFVVSLAYAYETKD--ALCLVLT 264 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEEC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh--hHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC--EEEEEEE
Confidence 378999999999999975 68999999997543211 123456889999999999999999999998877 7899999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh----
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---- 529 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~---- 529 (664)
|+++|+|.+++.......+++..+..++.+|+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 265 y~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g--IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~ 342 (576)
T 2acx_A 265 LMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342 (576)
T ss_dssp CCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE
T ss_pred cCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--EeccCCchheEEEeCCCCeEEEecccceecccCccc
Confidence 999999999987555556999999999999999999999998 99999999999999999999999999976532
Q ss_pred ----hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC--ChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ----AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG--SLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ----~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
....+.+||......++.++|||||||++|||+||+.||..... ...+.......... .++..
T Consensus 343 ~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~-----------~~p~~ 411 (576)
T 2acx_A 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-----------EYSER 411 (576)
T ss_dssp ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-----------CCCTT
T ss_pred cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc-----------cCCcc
Confidence 23456678887777789999999999999999999999964322 22222222222111 11222
Q ss_pred HHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRP-----TMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~ 631 (664)
...++.+++.+||+.||++|| ++.||++
T Consensus 412 ~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 335689999999999999999 6788764
No 176
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.1e-36 Score=325.05 Aligned_cols=247 Identities=8% Similarity=0.044 Sum_probs=171.7
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc--CCCcccceE-------EEEecC
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV--NHKNFVNLI-------GFCEEE 443 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~-------g~~~~~ 443 (664)
+.+.||+|+||.||+|+.. +++.||||++....... ....+.+.+|+++++.+ +||||++++ +++...
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS--RSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH--HHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEeccccc--ccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 3478999999999999965 78999999997654322 34456788885544444 699988754 444332
Q ss_pred CC---------------ceeEEEEEecCCCChhhhhcccCCCCCCHHHH------HHHHHHHHHHHHHhhcCCCCeEEeC
Q 006019 444 EP---------------FTRMMVFEYAPNGTLFEHIHIKESEHLDWGMR------LRIAMGMAYCLEHMHQLNPPIAHNY 502 (664)
Q Consensus 444 ~~---------------~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~------~~ia~~ia~gL~yLH~~~~~ivHrD 502 (664)
+. ...++|||||+ |+|.+++... ...+.+..+ ..|+.+++.||+|||+.+ |+|||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--ivHrD 219 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG--LVHGH 219 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--EEETT
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--CccCc
Confidence 21 23699999999 8999999743 223455566 788899999999999999 99999
Q ss_pred cCCCCeEecCCCceEecccCchhhhhhh------hhhcccccccCC--CCCCcCCcchhhHHHHHHHHhCCCCccCCCCC
Q 006019 503 LNSSAVHLTEDYAAKLSDLSFWNEIAMA------EMAATSKKLSSA--PSASLESNVYNFGVLLFEMVTGRLPYLVDNGS 574 (664)
Q Consensus 503 Lk~~NILld~~~~~kl~DfGla~~~~~~------~~~~~~pe~~~~--~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~ 574 (664)
|||+|||++.++.+||+|||+++..... ...+.+||.... ..++.++|||||||++|||+||+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 9999999999999999999998765322 245677888766 67899999999999999999999999543211
Q ss_pred hHHHHHHHhcCCCCCccccCCCC-CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 575 LEDWAADYLSGVQPLQQFVDPTL-SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
... .... ........... .......+..+.+++.+||+.||++||++.++++
T Consensus 300 ~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKG----SWKR-PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTT----CCCB-CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred ccc----chhh-hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0000 00000000000 0111234467899999999999999999999864
No 177
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.2e-36 Score=305.30 Aligned_cols=238 Identities=20% Similarity=0.320 Sum_probs=189.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||||.+....... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 90 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS--LDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT--DFFMVM 90 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccc--hhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--eEEEEE
Confidence 4578999999999999976 68999999986533211 123467899999999999999999999998876 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++++|.+++... ..+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 91 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 91 EYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp ECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHC--SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred eccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 999999999998643 45899999999999999999999998 999999999999999999999999998765321
Q ss_pred ------hhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 531 ------EMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 531 ------~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
...+.+||....... +.++||||||+++|||+||+.||.. ....+........... .+..
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--~~~~~~~~~~~~~~~~-----------~~~~ 233 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD--EHVPTLFKKIRGGVFY-----------IPEY 233 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCC-----------CCTT
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC--CcHHHHHHHhhcCccc-----------Cchh
Confidence 234567887765544 6899999999999999999999943 3333333333222111 1122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
....+.+++.+||+.||++||++.|+++.
T Consensus 234 ~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 234 LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 23568899999999999999999999873
No 178
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-36 Score=319.53 Aligned_cols=251 Identities=17% Similarity=0.182 Sum_probs=185.1
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|+.||||++.............+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 91 (346)
T 1ua2_A 14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS--NISLVF 91 (346)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT--CCEEEE
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC--ceEEEE
Confidence 4588999999999999975 5899999998754332211222356889999999999999999999998776 669999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++ +|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 167 (346)
T 1ua2_A 92 DFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167 (346)
T ss_dssp ECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred EcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC--EECCCCCHHHEEEcCCCCEEEEecccceeccCCcc
Confidence 99986 88888763 3456889999999999999999999999 999999999999999999999999999865321
Q ss_pred -------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCC-----CCCcc------
Q 006019 531 -------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV-----QPLQQ------ 591 (664)
Q Consensus 531 -------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~-----~~~~~------ 591 (664)
...+.+||.... ..++.++|||||||++|||++|+.||... ...+......... .....
T Consensus 168 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 168 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD--SDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC--CHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 223556776644 45788999999999999999999998432 2222222222110 00000
Q ss_pred ccC-CCCCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 592 FVD-PTLSSFD-----EEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 592 ~~d-~~~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.+. ......+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 0001111 2234678999999999999999999998874
No 179
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-36 Score=324.59 Aligned_cols=248 Identities=16% Similarity=0.214 Sum_probs=179.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|... +|..||||++..... .....+.+.+|+.++++++ ||||+++++++...+....++|
T Consensus 13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv 89 (388)
T 3oz6_A 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ---NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89 (388)
T ss_dssp EEEC-------CEEEEEETTTCCEEEEEEECC--C---CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred EEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc---ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence 4488999999999999964 689999999854322 1344567889999999997 9999999999976554467999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
||||+ |+|.++++. ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 90 ~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 90 FDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred ecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC--EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 99998 689988863 46899999999999999999999999 99999999999999999999999999975421
Q ss_pred ----------------------------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHH
Q 006019 530 ----------------------------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAA 580 (664)
Q Consensus 530 ----------------------------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~ 580 (664)
.+..+.+||...+ ..++.++|||||||++|||+||+.||... +..+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~--~~~~~~~ 241 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS--STMNQLE 241 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHH
Confidence 2334567886654 67899999999999999999999999532 2222222
Q ss_pred HHhcCCCC-Ccccc----------------------CCCCCCC-------------CHHHHHHHHHHHHHhccCCCCCCC
Q 006019 581 DYLSGVQP-LQQFV----------------------DPTLSSF-------------DEEQLETLGELIKSCVRADPEKRP 624 (664)
Q Consensus 581 ~~~~~~~~-~~~~~----------------------d~~~~~~-------------~~~~~~~l~~l~~~Cl~~~P~~RP 624 (664)
.++..... ..... ....... ......++.+++.+||+.||++||
T Consensus 242 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~ 321 (388)
T 3oz6_A 242 RIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRI 321 (388)
T ss_dssp HHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCC
Confidence 22110000 00000 0000000 002235688999999999999999
Q ss_pred CHHHHHHH
Q 006019 625 TMRDIAAI 632 (664)
Q Consensus 625 s~~ev~~~ 632 (664)
|+.|+++.
T Consensus 322 t~~e~l~H 329 (388)
T 3oz6_A 322 SANDALKH 329 (388)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhCC
Confidence 99998875
No 180
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.8e-36 Score=317.84 Aligned_cols=246 Identities=14% Similarity=0.197 Sum_probs=181.8
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 112 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE---EGVPGTAIREVSLLKELQHRNIIELKSVIHHNH--RLHLIF 112 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-----------CHHHHHHGGGCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc---cccchhHHHHHHHHHHcCCCCcceEEEEEecCC--EEEEEE
Confidence 3478999999999999854 6899999998654322 233457889999999999999999999998877 779999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe-----cCCCceEecccCchhhh
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL-----TEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl-----d~~~~~kl~DfGla~~~ 527 (664)
||++ |+|.+++.. ...+++..+..|+.+++.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++..
T Consensus 113 e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 113 EYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR--CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp ECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred ecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--EECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 9998 599999864 345899999999999999999999998 9999999999999 45566999999999865
Q ss_pred hhh---------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC-----CCc--
Q 006019 528 AMA---------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ-----PLQ-- 590 (664)
Q Consensus 528 ~~~---------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~-----~~~-- 590 (664)
... ...+.+||.... ..++.++|||||||++|||+||+.||... ...+.......... ...
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 265 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD--SEIDQLFKIFEVLGLPDDTTWPGV 265 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC--CHHHHHHHHHHHhCCCchhhhhhh
Confidence 321 234567887655 45799999999999999999999999432 22222222221100 000
Q ss_pred ----ccc--CCCCCCC------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 591 ----QFV--DPTLSSF------DEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 591 ----~~~--d~~~~~~------~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
... .+..... +.....++.+++.+||+.||++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 0000000 0113357889999999999999999999875
No 181
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.9e-36 Score=309.07 Aligned_cols=237 Identities=20% Similarity=0.280 Sum_probs=184.7
Q ss_pred cccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEEe
Q 006019 376 NVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEY 454 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~Ey 454 (664)
..||+|+||.||+|+. .++..||||.+..... ...+.+.+|+.++++++||||+++++++...+ ..++||||
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e~ 100 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--FIKIFMEQ 100 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC--------HHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEEEC
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCch-----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--cEEEEEEe
Confidence 4799999999999996 4688999999865432 23467999999999999999999999998877 67999999
Q ss_pred cCCCChhhhhcccC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC-CCceEecccCchhhhhh---
Q 006019 455 APNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE-DYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 455 ~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~-~~~~kl~DfGla~~~~~--- 529 (664)
+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ ++||||||+||+++. ++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC--EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999987542 345678999999999999999999998 999999999999997 89999999999876532
Q ss_pred ------hhhhcccccccCCC--CCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 530 ------AEMAATSKKLSSAP--SASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~--~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
....+.+||..... .++.++||||||+++|||+||+.||................. ..+ ..+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-------~~~---~~~ 248 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-------VHP---EIP 248 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC-------CCC---CCC
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc-------ccc---ccc
Confidence 12344566655332 378899999999999999999999953322221111111111 011 112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.....++.+++.+||+.||++||++.++++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 233456889999999999999999999875
No 182
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.8e-36 Score=345.65 Aligned_cols=245 Identities=19% Similarity=0.311 Sum_probs=196.6
Q ss_pred hhhhcccccCCCeEEEEEEECC----CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 372 EDFSNVIGSSPIGTVYKGTLSN----GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~~----~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
..+.+.||+|+||.||+|++.. +..||+|.+.... .....+.|.+|+.++++++||||++++|++.+ + .
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~--~ 464 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT----SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N--P 464 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S--S
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-C--c
Confidence 3445889999999999999743 4578888775322 23455789999999999999999999999864 3 4
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhh
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~ 527 (664)
.++||||+++|+|.++++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 465 ~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp CEEEEECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred eEEEEEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 5899999999999999964 3456999999999999999999999998 999999999999999999999999998765
Q ss_pred hhh----------hhhcccccccCCCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 528 AMA----------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 528 ~~~----------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
... ...+.+||......++.++|||||||++|||+| |+.||.. ....+.......+..
T Consensus 542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~--~~~~~~~~~i~~~~~--------- 610 (656)
T 2j0j_A 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVIGRIENGER--------- 610 (656)
T ss_dssp CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--CCHHHHHHHHHHTCC---------
T ss_pred CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC--CCHHHHHHHHHcCCC---------
Confidence 321 134667887766778999999999999999998 9999943 233333333332211
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
...+..++..+.+++.+||+.||++||++.++++.|+++.+
T Consensus 611 -~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 611 -LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 11223344678999999999999999999999999999864
No 183
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8.5e-36 Score=308.47 Aligned_cols=238 Identities=16% Similarity=0.216 Sum_probs=187.4
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..+|+|.+...... ..+.|.+|++++++++||||+++++++...+ ..++||
T Consensus 23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 95 (302)
T 2j7t_A 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-----ELEDYIVEIEILATCDHPYIVKLLGAYYHDG--KLWIMI 95 (302)
T ss_dssp EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECC---CEEEEE
T ss_pred ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH-----HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--eEEEEE
Confidence 4478999999999999976 5889999988654322 2467999999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (302)
T 2j7t_A 96 EFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ 172 (302)
T ss_dssp ECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred EeCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC--cccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence 99999999998863 2356999999999999999999999998 99999999999999999999999998764422
Q ss_pred ------hhhhccccccc-----CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 530 ------AEMAATSKKLS-----SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 530 ------~~~~~~~pe~~-----~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
....+.+||.. ....++.++||||||+++|||+||+.||.. ....+........... . .
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--~~~~~~~~~~~~~~~~--~------~ 242 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE--LNPMRVLLKIAKSDPP--T------L 242 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCCC--C------C
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCcc--CCHHHHHHHHhccCCc--c------c
Confidence 12345577765 356678999999999999999999999943 2233333332222110 0 0
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+...+..+.+++.+||+.||++||++.++++
T Consensus 243 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112233457899999999999999999998875
No 184
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=9.6e-36 Score=308.40 Aligned_cols=237 Identities=16% Similarity=0.255 Sum_probs=192.1
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
..+.||+|+||.||+|+.. ++..||+|++...... ...+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 99 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE----DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--KLWIIM 99 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS----TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH----HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--eEEEEE
Confidence 3478999999999999864 6889999998754432 23567999999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++. ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 100 e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 100 EYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK--KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp ECCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred EeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 9999999999985 346899999999999999999999998 99999999999999999999999999875532
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
....+.+||......++.++||||||+++|||+||+.||.. ....+.......... + ..+..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--~~~~~~~~~~~~~~~-------~---~~~~~ 242 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE--LHPMKVLFLIPKNNP-------P---TLEGN 242 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--SCHHHHHHHHHHSCC-------C---CCCSS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC--cCHHHHHHHhhcCCC-------C---CCccc
Confidence 12345678887777888999999999999999999999943 222222222221110 1 11122
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAAIL 633 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 633 (664)
.+..+.+++.+||+.||++||++.++++..
T Consensus 243 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 243 YSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 235688999999999999999999998753
No 185
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.8e-35 Score=313.32 Aligned_cols=242 Identities=21% Similarity=0.332 Sum_probs=189.4
Q ss_pred hcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCc---hhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeE
Q 006019 375 SNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWP---KNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 449 (664)
.+.||+|+||.||+|+.. +|..||||++......... ....+.+.+|+++++++ +||||+++++++.... ..+
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~--~~~ 176 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS--FMF 176 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS--EEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC--EEE
Confidence 389999999999999985 6999999998754422111 12345788999999999 7999999999998776 779
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+||||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 177 lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g--i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~ 252 (365)
T 2y7j_A 177 LVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252 (365)
T ss_dssp EEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence 99999999999999863 346999999999999999999999998 99999999999999999999999999876532
Q ss_pred --------hhhhcccccccC------CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCC
Q 006019 530 --------AEMAATSKKLSS------APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDP 595 (664)
Q Consensus 530 --------~~~~~~~pe~~~------~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 595 (664)
....+.+||... ...++.++|||||||++|||+||+.||.. .................. .+
T Consensus 253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~--~~~~~~~~~i~~~~~~~~---~~ 327 (365)
T 2y7j_A 253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH--RRQILMLRMIMEGQYQFS---SP 327 (365)
T ss_dssp TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCCC---HH
T ss_pred CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC--CCHHHHHHHHHhCCCCCC---Cc
Confidence 123456677543 33578899999999999999999999943 222233322222211110 00
Q ss_pred CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 596 TLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 596 ~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
... ..+..+.+++.+||+.||++||++.++++
T Consensus 328 ~~~----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 328 EWD----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHS----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccc----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 001 12346889999999999999999999886
No 186
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-35 Score=328.62 Aligned_cols=242 Identities=20% Similarity=0.260 Sum_probs=193.7
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
+.+.+.||+|+||.||+|+.. ++..||||++....... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 103 (484)
T 3nyv_A 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG--YFYL 103 (484)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--SSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--chHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--EEEE
Confidence 445689999999999999975 68999999987543322 223567999999999999999999999998876 7799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe---cCCCceEecccCchhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL---TEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl---d~~~~~kl~DfGla~~~ 527 (664)
||||+++|+|.+++.. ...+++..+..|+.+++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 104 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999998863 456999999999999999999999998 9999999999999 56789999999998765
Q ss_pred hh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 528 AM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 528 ~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
.. ....+.+||...+ .++.++||||+||++|||+||+.||.. ....+.......+..... .+.
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~---~~~--- 250 (484)
T 3nyv_A 180 EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG--ANEYDILKKVEKGKYTFE---LPQ--- 250 (484)
T ss_dssp CCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCC---SGG---
T ss_pred ccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHcCCCCCC---Ccc---
Confidence 32 2345667877654 588999999999999999999999943 333344443333211110 011
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+..+.+++.+||+.||++|||+.|+++
T Consensus 251 -~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 251 -WKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp -GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -cccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 1223456889999999999999999999986
No 187
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.1e-35 Score=322.20 Aligned_cols=242 Identities=20% Similarity=0.257 Sum_probs=183.1
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCC---chhHHHHHHHHHHHHhccCCCcccceEEEEecCCCcee
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDW---PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~ 448 (664)
.+.+.||+|+||.||+|... ++..||||++........ .......+.+|+++|++++|||||++++++... ..
T Consensus 138 ~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---~~ 214 (419)
T 3i6u_A 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---DY 214 (419)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS---EE
T ss_pred EEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC---ce
Confidence 34588999999999999965 578999999876432211 011223588999999999999999999998643 46
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC---CceEecccCchh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED---YAAKLSDLSFWN 525 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~---~~~kl~DfGla~ 525 (664)
++||||+++|+|.+++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 215 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 215 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred EEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCCCcceEEEeecccce
Confidence 89999999999999886 3456999999999999999999999998 9999999999999754 459999999998
Q ss_pred hhhhh--------hhhcccccccC---CCCCCcCCcchhhHHHHHHHHhCCCCccCCCC--ChHHHHHHHhcCCCCCccc
Q 006019 526 EIAMA--------EMAATSKKLSS---APSASLESNVYNFGVLLFEMVTGRLPYLVDNG--SLEDWAADYLSGVQPLQQF 592 (664)
Q Consensus 526 ~~~~~--------~~~~~~pe~~~---~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~ 592 (664)
..... ...+.+||... ...++.++|||||||++|||+||+.||..... .+.+. ..........
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~---i~~~~~~~~~- 366 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ---ITSGKYNFIP- 366 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHH---HHTTCCCCCH-
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHH---HhcCCCCCCc-
Confidence 65422 33456788764 35678899999999999999999999953221 11111 1111100000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 593 VDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 593 ~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.........+.+++.+||+.||++||++.|+++
T Consensus 367 ------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 367 ------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp ------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ------hhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 000112356889999999999999999999886
No 188
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.5e-36 Score=315.93 Aligned_cols=252 Identities=13% Similarity=0.182 Sum_probs=193.9
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCc------------hhHHHHHHHHHHHHhccCCCcccceEEEEe
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWP------------KNLEVQFRKKIDTLSKVNHKNFVNLIGFCE 441 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~------------~~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 441 (664)
+.+.||+|+||.||+|+. ++..||+|.+......... ....+.|.+|++++++++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 447899999999999999 8999999999754332210 011268999999999999999999999998
Q ss_pred cCCCceeEEEEEecCCCChhhh------hcccCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCCeEEeCcCCCCeEecCCC
Q 006019 442 EEEPFTRMMVFEYAPNGTLFEH------IHIKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDY 514 (664)
Q Consensus 442 ~~~~~~~~lV~Ey~~~GsL~~~------l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~-~~~~ivHrDLk~~NILld~~~ 514 (664)
+.+ ..++||||+++|+|.++ +.......+++..+..++.+++.||+|||+ .+ ++||||||+||+++.++
T Consensus 114 ~~~--~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dl~p~Nil~~~~~ 189 (348)
T 2pml_X 114 NYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNG 189 (348)
T ss_dssp SSS--EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC--EECCCCCGGGEEECTTS
T ss_pred eCC--eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC--EeecCCChHhEEEcCCC
Confidence 877 77999999999999998 654446789999999999999999999998 88 99999999999999999
Q ss_pred ceEecccCchhhhhh-------hhhhcccccccCCC-CCCc-CCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcC
Q 006019 515 AAKLSDLSFWNEIAM-------AEMAATSKKLSSAP-SASL-ESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSG 585 (664)
Q Consensus 515 ~~kl~DfGla~~~~~-------~~~~~~~pe~~~~~-~~s~-ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~ 585 (664)
.+||+|||+++.... ....+.+||..... .++. ++||||||+++|||+||+.||..... ..+........
T Consensus 190 ~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~i~~~ 268 (348)
T 2pml_X 190 RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS-LVELFNNIRTK 268 (348)
T ss_dssp CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC-SHHHHHHHTSC
T ss_pred cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHhcc
Confidence 999999999876432 23445678877665 5555 99999999999999999999953322 13333333322
Q ss_pred CCCCcc----ccCCCC----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 586 VQPLQQ----FVDPTL----SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 586 ~~~~~~----~~d~~~----~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...... ...+.. .......+..+.+++.+||+.||++||++.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111110 000000 0011234467899999999999999999999886
No 189
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.9e-36 Score=308.05 Aligned_cols=230 Identities=14% Similarity=0.179 Sum_probs=180.4
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +++.||||.+....... ....+.|.+|++.+++++||||+++++++...+ ..++||
T Consensus 35 i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~--~~~lv~ 110 (286)
T 3uqc_A 35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP--DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA--GGLVVA 110 (286)
T ss_dssp EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC--HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC--cEEEEE
Confidence 4478999999999999975 48999999987543322 345578999999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhhhh
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM 532 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~~~ 532 (664)
||+++++|.+++... .......+|+.+++.||+|||+.+ |+||||||+|||++.++.+||+++|..
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g--ivH~Dikp~NIll~~~g~~kl~~~~~~-------- 176 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG--VALSIDHPSRVRVSIDGDVVLAYPATM-------- 176 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEEETTSCEEECSCCCC--------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC--CccCCCCcccEEEcCCCCEEEEecccc--------
Confidence 999999999998532 355678899999999999999998 999999999999999999999977642
Q ss_pred hcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC---CCCHHHHHHHH
Q 006019 533 AATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS---SFDEEQLETLG 609 (664)
Q Consensus 533 ~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~l~ 609 (664)
..++.++|||||||++|||+||+.||....... .............. ......+.++.
T Consensus 177 ----------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (286)
T 3uqc_A 177 ----------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRS---------GLAPAERDTAGQPIEPADIDRDIPFQIS 237 (286)
T ss_dssp ----------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCC---------CSEECCBCTTSCBCCHHHHCTTSCHHHH
T ss_pred ----------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcch---------hhHHHHHHhccCCCChhhcccCCCHHHH
Confidence 246789999999999999999999995322100 00000000011000 11123446789
Q ss_pred HHHHHhccCCCCCCCCHHHHHHHHHhhhCCCC
Q 006019 610 ELIKSCVRADPEKRPTMRDIAAILREITGITP 641 (664)
Q Consensus 610 ~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~~ 641 (664)
+++.+||+.||++| |+.|+++.|+++.....
T Consensus 238 ~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 238 AVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 99999999999999 99999999999986543
No 190
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=314.54 Aligned_cols=245 Identities=17% Similarity=0.314 Sum_probs=186.2
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
+.+.||+|+||.||+|+..+ .+|+|++....... ...+.|.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~iv~e 109 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPP--HLAIITS 109 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC---CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--CEEEECB
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH---HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--ceEEEee
Confidence 45789999999999999854 48999886543222 12345788999999999999999999999876 6799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh----
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---- 529 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~---- 529 (664)
|+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++ ++.+||+|||+++....
T Consensus 110 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~--i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 110 LCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 9999999999964 3456899999999999999999999998 99999999999998 67999999998765421
Q ss_pred ----------hhhhcccccccCC---------CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCc
Q 006019 530 ----------AEMAATSKKLSSA---------PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQ 590 (664)
Q Consensus 530 ----------~~~~~~~pe~~~~---------~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~ 590 (664)
....+.+||.... ..++.++||||||+++|||+||+.||.. ....+.......... .
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~--~~~~~~~~~~~~~~~--~ 261 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT--QPAEAIIWQMGTGMK--P 261 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS--CCHHHHHHHHHTTCC--C
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHhccCCC--C
Confidence 2234456765542 3478899999999999999999999943 233333333322211 1
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhCCC
Q 006019 591 QFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITGIT 640 (664)
Q Consensus 591 ~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~~~ 640 (664)
..... ..+.++.+++.+||+.||++||++.++++.|+++.+..
T Consensus 262 ~~~~~-------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 262 NLSQI-------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCS-------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCcC-------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111 12235889999999999999999999999999987754
No 191
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.1e-35 Score=326.59 Aligned_cols=242 Identities=20% Similarity=0.265 Sum_probs=193.4
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
+.+.+.||+|+||.||+|+.. ++..||||++....... .....+.+|++++++++|||||++++++.+.. ..++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 98 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---KDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFYI 98 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc---hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC--EEEE
Confidence 445689999999999999975 68999999987543322 12467899999999999999999999998877 6799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec---CCCceEecccCchhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT---EDYAAKLSDLSFWNEI 527 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld---~~~~~kl~DfGla~~~ 527 (664)
||||+++|+|.+++... ..+++..+..|+.+++.||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 99 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999988643 46899999999999999999999999 99999999999995 4568999999998755
Q ss_pred hh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 528 AM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 528 ~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
.. ....+.+||.... .++.++||||+||++|||+||+.||.. ....+.......+..... .+.
T Consensus 175 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~--~~~~~~~~~i~~~~~~~~---~~~--- 245 (486)
T 3mwu_A 175 QQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG--KNEYDILKRVETGKYAFD---LPQ--- 245 (486)
T ss_dssp CCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCSC---SGG---
T ss_pred CCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHHhCCCCCC---Ccc---
Confidence 32 2445678887765 588999999999999999999999943 333344444333211111 011
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
....+..+.+++.+||+.||++|||+.++++.
T Consensus 246 -~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 -WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 12233568899999999999999999999874
No 192
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=316.94 Aligned_cols=252 Identities=15% Similarity=0.221 Sum_probs=186.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..||+|++....... ....+.+|++++++++||||+++++++...+ ..++||
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 79 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG----APCTAIREVSLLKDLKHANIVTLHDIIHTEK--SLTLVF 79 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--CEEEEE
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc----cchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--EEEEEe
Confidence 3478999999999999975 68899999986433221 1124567999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||++ |+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 80 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 80 EYLD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp ECCS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred cccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 9997 599888864 3456999999999999999999999999 99999999999999999999999999875431
Q ss_pred ------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhc---CC--CCCccccC---
Q 006019 530 ------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLS---GV--QPLQQFVD--- 594 (664)
Q Consensus 530 ------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~---~~--~~~~~~~d--- 594 (664)
....+.+||.... ..++.++|||||||++|||+||+.||... ...+....... .. ........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS--TVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 1334567886654 56899999999999999999999999532 22222222111 10 00000000
Q ss_pred ------CCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHHhhh
Q 006019 595 ------PTLS-----SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA--ILREIT 637 (664)
Q Consensus 595 ------~~~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~ 637 (664)
+... ...+.....+.+++.+||+.||++|||++|+++ .+.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence 0000 001123356889999999999999999999987 444443
No 193
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=306.37 Aligned_cols=242 Identities=20% Similarity=0.273 Sum_probs=188.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|... ++..+|+|++........ ....+.+.+|++++++++||||+++++++...+....++||
T Consensus 9 i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (305)
T 2wtk_C 9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRI-PNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVM 87 (305)
T ss_dssp CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHS-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEE
T ss_pred EeeEEecCCCeEEEEEEECCCCcEEEEEEecccccccc-chhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEe
Confidence 4578999999999999964 688999999865432111 12456799999999999999999999998644333679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++| |.+++.......+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 88 e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~--i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 164 (305)
T 2wtk_C 88 EYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA 164 (305)
T ss_dssp ECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS
T ss_pred hhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC--eeecCCCcccEEEcCCCcEEeeccccccccCcccc
Confidence 999876 777776555677999999999999999999999998 99999999999999999999999999876431
Q ss_pred --------hhhhcccccccCCCC--CCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 530 --------AEMAATSKKLSSAPS--ASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 530 --------~~~~~~~pe~~~~~~--~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
....+.+||...... .+.++||||||+++|||+||+.||.. ....+.......... .
T Consensus 165 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--~~~~~~~~~i~~~~~-----------~ 231 (305)
T 2wtk_C 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG--DNIYKLFENIGKGSY-----------A 231 (305)
T ss_dssp SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC--SSHHHHHHHHHHCCC-----------C
T ss_pred ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHhcCCC-----------C
Confidence 223455677655433 37799999999999999999999943 333343333332211 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.+..+...+.+++.+||+.||++||++.|+++.
T Consensus 232 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 122233568899999999999999999999864
No 194
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.3e-36 Score=317.73 Aligned_cols=248 Identities=15% Similarity=0.239 Sum_probs=190.3
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..||+|++.... .....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 110 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG--EISICM 110 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC----CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEecccc----CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--EEEEEE
Confidence 3478999999999999975 68899999987542 2345678999999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh-
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~- 530 (664)
||+++|+|.+++... ..+++..+..|+.+++.||+|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp CCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHC--CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred ECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCC--EEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 999999999998643 4689999999999999999999985 7 999999999999999999999999998765322
Q ss_pred ------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHh-cCC------------CCC--
Q 006019 531 ------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYL-SGV------------QPL-- 589 (664)
Q Consensus 531 ------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~-~~~------------~~~-- 589 (664)
...+.+||......++.++|||||||++|||+||+.||............... ... ...
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266 (360)
T ss_dssp ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------------
T ss_pred ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccc
Confidence 23456788877788899999999999999999999999532211111100000 000 000
Q ss_pred ---------------ccccCCCCCC-CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 590 ---------------QQFVDPTLSS-FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 590 ---------------~~~~d~~~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+....... .......++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000000 01123456889999999999999999999986
No 195
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7e-36 Score=327.66 Aligned_cols=247 Identities=17% Similarity=0.209 Sum_probs=184.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC----cee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP----FTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~ 448 (664)
+.+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|+++++.++|||||++++++...+. ...
T Consensus 66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN---QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGS---HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccC---hHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 3478999999999999864 6899999998754221 3445778999999999999999999999965431 256
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++|||||++ +|.+.+. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 143 ~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~--iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 143 YLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 999999976 5666664 24899999999999999999999998 9999999999999999999999999998764
Q ss_pred hh--------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC-------------
Q 006019 529 MA--------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ------------- 587 (664)
Q Consensus 529 ~~--------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~------------- 587 (664)
.. ...+.+||......++.++|||||||++|||++|+.||... +..+....++....
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~--~~~~~~~~i~~~lg~p~~~~~~~~~~~ 293 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR--DYIDQWNKVIEQLGTPCPEFMKKLQPT 293 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHHCSCCHHHHTTSCHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHhcCCCCHHHHHHcchh
Confidence 32 23456788888888999999999999999999999999532 22221111111000
Q ss_pred ---------CCc-----cccCCCCC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 588 ---------PLQ-----QFVDPTLS----SFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 588 ---------~~~-----~~~d~~~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
... ......+. ........++.+|+.+||+.||++|||++|+++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 00000000 0011225678999999999999999999998863
No 196
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.3e-36 Score=315.23 Aligned_cols=247 Identities=20% Similarity=0.277 Sum_probs=186.7
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. ++..||||++..... .....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 103 (331)
T 4aaa_A 29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD---DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK--RWYLVF 103 (331)
T ss_dssp EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC---chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC--EEEEEE
Confidence 3478999999999999975 488999999864332 2345567899999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++++|.+++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 104 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC--EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999999988764 3346999999999999999999999998 999999999999999999999999998765321
Q ss_pred -------hhhcccccccCCC-CCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhc--------------CCCC
Q 006019 531 -------EMAATSKKLSSAP-SASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLS--------------GVQP 588 (664)
Q Consensus 531 -------~~~~~~pe~~~~~-~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~--------------~~~~ 588 (664)
...+.+||..... .++.++|||||||++|||+||+.||.... ..+....... ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS--DIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 2234567766543 67899999999999999999999995322 1111111110 0000
Q ss_pred CccccCCCCCC------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 589 LQQFVDPTLSS------FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 589 ~~~~~d~~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
......+.... ..+..+..+.+++.+||+.||++||++.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111111110 01123467899999999999999999998876
No 197
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.6e-36 Score=313.81 Aligned_cols=245 Identities=19% Similarity=0.282 Sum_probs=172.1
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .++..||||.+...... ...+++.+|++++++++||||+++++++...+ ..++||
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 92 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ----TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD--ELWLVM 92 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC--------------------CCCCCCCTTBCCEEEEEESSS--CEEEEE
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc----hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC--CcEEEe
Confidence 458899999999999985 46889999988643321 23467899999999999999999999998877 679999
Q ss_pred EecCCCChhhhhcc------cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhh
Q 006019 453 EYAPNGTLFEHIHI------KESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE 526 (664)
Q Consensus 453 Ey~~~GsL~~~l~~------~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~ 526 (664)
||+++|+|.+++.. .....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG--QIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 99999999998853 13456999999999999999999999998 99999999999999999999999999876
Q ss_pred hhhh--------------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC-CCc
Q 006019 527 IAMA--------------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ-PLQ 590 (664)
Q Consensus 527 ~~~~--------------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~-~~~ 590 (664)
.... ...+.+||.... ..++.++||||||+++|||+||+.||..... .+.......... ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~ 248 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP--MKVLMLTLQNDPPSLE 248 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG--GGHHHHHHTSSCCCTT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch--hhHHHHHhccCCCccc
Confidence 5321 122445665433 4578899999999999999999999953221 111112222111 111
Q ss_pred -cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 591 -QFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 591 -~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...++. ........+.+++.+||+.||++||++.++++
T Consensus 249 ~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 249 TGVQDKE---MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp C-----C---CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccch---hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 011111 11223356889999999999999999999886
No 198
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.5e-36 Score=313.75 Aligned_cols=238 Identities=16% Similarity=0.226 Sum_probs=184.8
Q ss_pred hcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHH-HhccCCCcccceEEEEecCCCceeEEEE
Q 006019 375 SNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDT-LSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
.+.||+|+||.||+|+. .+|+.||||++..... .....++..|..+ ++.++||||+++++++.+.+ ..++||
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~ 129 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN----SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICM 129 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC----CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS--CEEEEE
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccC----cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC--cEEEEH
Confidence 47899999999999996 4789999999864332 2234556666665 78899999999999998876 679999
Q ss_pred EecCCCChhhhhccc--CCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 453 EYAPNGTLFEHIHIK--ESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~--~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
||+++ +|.+++... ....+++..+..|+.+++.||+|||+. + |+||||||+|||++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC--CCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 998887532 456799999999999999999999985 8 99999999999999999999999999886632
Q ss_pred h--------hhhccccccc----CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 530 A--------EMAATSKKLS----SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 530 ~--------~~~~~~pe~~----~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
. ...+.+||.. ....++.++|||||||++|||+||+.||...... .+........... ..
T Consensus 207 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~-------~~ 278 (340)
T 3an0_A 207 SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-FQQLKQVVEEPSP-------QL 278 (340)
T ss_dssp HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-HHHHHHHHHSCCC-------CC
T ss_pred ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-HHHHHHHhcCCCC-------CC
Confidence 2 2235567764 3346789999999999999999999999533222 2222222222110 00
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.....+.++.+++.+||+.||++||++.|+++
T Consensus 279 --~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 279 --PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 01223457899999999999999999999987
No 199
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.1e-35 Score=327.14 Aligned_cols=241 Identities=18% Similarity=0.251 Sum_probs=186.5
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~l 450 (664)
+.+.+.||+|+||.||+|+.. ++..+|+|++....... .....+.+|++++++++|||||++++++.+.+ ..++
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~l 113 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST---SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR--NYYL 113 (494)
T ss_dssp EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC--------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS--EEEE
T ss_pred eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc---hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC--EEEE
Confidence 345588999999999999975 68899999987543222 22467899999999999999999999998876 6799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC---CceEecccCchhhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED---YAAKLSDLSFWNEI 527 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~---~~~kl~DfGla~~~ 527 (664)
||||+++|+|.+++... ..+++..+..|+.+++.||+|||+.+ |+||||||+|||++.+ +.+||+|||+++..
T Consensus 114 v~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999999988633 46899999999999999999999998 9999999999999764 55999999998765
Q ss_pred hh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 528 AM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 528 ~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
.. ....+.+||... ..++.++|||||||++|||+||+.||. .....+.......+..... .+....
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~--~~~~~~~~~~i~~~~~~~~---~~~~~~ 263 (494)
T 3lij_A 190 ENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFG--GQTDQEILRKVEKGKYTFD---SPEWKN 263 (494)
T ss_dssp BTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHTCCCCC---SGGGTT
T ss_pred CCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCC--CCCHHHHHHHHHhCCCCCC---chhccc
Confidence 32 223456777665 458899999999999999999999994 3334444444433321111 111111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.+..+.+++.+||+.||++|||+.++++
T Consensus 264 ----~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 264 ----VSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----CCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 2356889999999999999999999885
No 200
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.9e-36 Score=314.89 Aligned_cols=237 Identities=17% Similarity=0.283 Sum_probs=184.3
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEE
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMM 450 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 450 (664)
.+.+.||+|+||.||+|+.. +++.+|+|++..... .+.+|++++.++ +||||+++++++.+.+ ..++
T Consensus 25 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--~~~l 93 (342)
T 2qr7_A 25 EVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---------DPTEEIEILLRYGQHPNIITLKDVYDDGK--YVYV 93 (342)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---------CCHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---------ChHHHHHHHHHhcCCCCcCeEEEEEEcCC--EEEE
Confidence 34588999999999999975 588999999864321 245688888888 7999999999998876 7799
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC----CceEecccCchhh
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED----YAAKLSDLSFWNE 526 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~----~~~kl~DfGla~~ 526 (664)
||||+++|+|.+++.. ...+++.....++.+++.||+|||+.+ |+||||||+|||+.++ +.+||+|||+++.
T Consensus 94 v~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~g--ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 94 VTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp EECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 9999999999999863 456999999999999999999999998 9999999999998543 3599999999886
Q ss_pred hhhh---------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCC-CChHHHHHHHhcCCCCCccccCCC
Q 006019 527 IAMA---------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDN-GSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 527 ~~~~---------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
.... ...+.+||......++.++|||||||++|||+||+.||.... ....+.......+..... .
T Consensus 170 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~---~-- 244 (342)
T 2qr7_A 170 LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLS---G-- 244 (342)
T ss_dssp CBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCC---S--
T ss_pred CcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccC---c--
Confidence 5322 123345665544456789999999999999999999996432 334444444433321111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 597 LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 597 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
........++.+++.+||+.||++||++.++++
T Consensus 245 --~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 245 --GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111223356889999999999999999999876
No 201
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.5e-35 Score=328.63 Aligned_cols=234 Identities=20% Similarity=0.253 Sum_probs=190.0
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEEe
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEY 454 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~Ey 454 (664)
+.||+|+||.||+|+.. +|+.||+|++....... ....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~--~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~--~l~lVmE~ 266 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK--RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT--DLCLVMTI 266 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH--TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--EEEEEECC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh--hHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC--EEEEEEEe
Confidence 67999999999999975 68999999997543211 122467899999999999999999999998876 77999999
Q ss_pred cCCCChhhhhcccC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 455 APNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 455 ~~~GsL~~~l~~~~--~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
+++|+|.+++.... ...+++..+..++.+|+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 267 ~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g--IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 267 MNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred ccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC--CcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 99999999986432 456999999999999999999999998 99999999999999999999999999976532
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC--ChHHHHHHHhcCCCCCccccCCCCCCCC
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG--SLEDWAADYLSGVQPLQQFVDPTLSSFD 601 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 601 (664)
.+..+.+||......++.++|||||||++|||+||+.||..... ...+.......... .++
T Consensus 345 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~-----------~~p 413 (543)
T 3c4z_A 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAV-----------TYP 413 (543)
T ss_dssp CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-----------CCC
T ss_pred ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhccc-----------CCC
Confidence 22345678887777889999999999999999999999964322 33444444333211 112
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCH
Q 006019 602 EEQLETLGELIKSCVRADPEKRPTM 626 (664)
Q Consensus 602 ~~~~~~l~~l~~~Cl~~~P~~RPs~ 626 (664)
...+..+.+++.+||+.||++||++
T Consensus 414 ~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 414 DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred cccCHHHHHHHHHhccCCHhHCCCC
Confidence 2334578899999999999999976
No 202
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.2e-36 Score=306.20 Aligned_cols=240 Identities=15% Similarity=0.217 Sum_probs=177.2
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+. .+++.||+|++..... .....+.+.++...++.++||||+++++++.+.+ ..++||
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~--~~~lv~ 85 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN---SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG--DVWICM 85 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C---HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--SEEEEE
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC---cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC--CEEEEE
Confidence 447899999999999996 4789999999864322 1223344555666688899999999999998876 679999
Q ss_pred EecCCCChhhhhcc--cCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 453 EYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
||++ |+|.+++.. .....+++..+..|+.+++.||+|||+. + |+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC--CCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC--eecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 588877753 2456799999999999999999999986 8 99999999999999999999999999876532
Q ss_pred h--------hhhccccccc----CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCC
Q 006019 530 A--------EMAATSKKLS----SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTL 597 (664)
Q Consensus 530 ~--------~~~~~~pe~~----~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 597 (664)
. ...+.+||.. ....++.++||||||+++|||+||+.||.......... ......... ...
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~--~~~---- 235 (290)
T 3fme_A 163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL-KQVVEEPSP--QLP---- 235 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH-HHHHHSCCC--CCC----
T ss_pred cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH-HHHhccCCC--Ccc----
Confidence 2 2234567763 45568899999999999999999999995333322222 222222110 000
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 598 SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 598 ~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+.++.+++.+||+.||++|||+.|+++
T Consensus 236 ---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 ---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1122356889999999999999999999987
No 203
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.3e-35 Score=315.49 Aligned_cols=260 Identities=16% Similarity=0.186 Sum_probs=189.7
Q ss_pred HHHHHHhhhh--cccccCCCeEEEEEEECCCcEEEEEEeeecccCCC------chhHHHHHHHHHHHHhccCCCcccceE
Q 006019 366 ELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDW------PKNLEVQFRKKIDTLSKVNHKNFVNLI 437 (664)
Q Consensus 366 el~~~~~~~~--~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~------~~~~~~~f~~E~~~l~~l~H~niv~l~ 437 (664)
++......+. +.||+|+||.||+|...+|..||||++........ .....+.+.+|++++++++||||++++
T Consensus 16 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 95 (362)
T 3pg1_A 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLR 95 (362)
T ss_dssp HHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCS
T ss_pred HHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcccee
Confidence 3444444443 89999999999999988899999999865443221 122347899999999999999999999
Q ss_pred EEEecCC---CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC
Q 006019 438 GFCEEEE---PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY 514 (664)
Q Consensus 438 g~~~~~~---~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~ 514 (664)
+++...+ ....++||||++ |+|.+++.. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++
T Consensus 96 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~NIl~~~~~ 171 (362)
T 3pg1_A 96 DIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNN 171 (362)
T ss_dssp EEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTC
T ss_pred eeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc--CEecCCChHHEEEcCCC
Confidence 9986432 225699999998 688888863 3457999999999999999999999998 99999999999999999
Q ss_pred ceEecccCchhhhhhh--------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcC
Q 006019 515 AAKLSDLSFWNEIAMA--------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSG 585 (664)
Q Consensus 515 ~~kl~DfGla~~~~~~--------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~ 585 (664)
.+||+|||+++..... ...+.+||.... ..++.++|||||||++|||+||+.||... ...+........
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~i~~~ 249 (362)
T 3pg1_A 172 DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS--TFYNQLNKIVEV 249 (362)
T ss_dssp CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHH
T ss_pred CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHH
Confidence 9999999999754321 233567886654 66899999999999999999999999432 222222211110
Q ss_pred CC--C-----------CccccCCCCC--------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 586 VQ--P-----------LQQFVDPTLS--------SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 586 ~~--~-----------~~~~~d~~~~--------~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.. . .......... .........+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00 0 0000000000 011223456889999999999999999999986
No 204
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-35 Score=326.10 Aligned_cols=246 Identities=14% Similarity=0.185 Sum_probs=188.8
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc-ccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN-FVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+. .++..||||++...... .++..|+++++.++|++ +..+..++...+ ..++|
T Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~--~~~lv 81 (483)
T 3sv0_A 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-------PQLLYESKIYRILQGGTGIPNVRWFGVEGD--YNVLV 81 (483)
T ss_dssp CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-------CCHHHHHHHHHHTTTSTTCCCEEEEEEETT--EEEEE
T ss_pred EEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC--EEEEE
Confidence 447899999999999996 56899999987654332 24789999999998754 555555555555 67999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe---cCCCceEecccCchhhhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL---TEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl---d~~~~~kl~DfGla~~~~ 528 (664)
|||+ +|+|.+++.. ....+++..++.|+.+|+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 82 me~~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g--IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EECC-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC--EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9999 9999999863 3456999999999999999999999998 9999999999999 688999999999997653
Q ss_pred hh----------------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC-ChHHHHHHHhcCCCCCcc
Q 006019 529 MA----------------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG-SLEDWAADYLSGVQPLQQ 591 (664)
Q Consensus 529 ~~----------------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~-~~~~~~~~~~~~~~~~~~ 591 (664)
.. ...+.+||......++.++|||||||++|||+||+.||..... ...+......... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--~~~ 235 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK--VAT 235 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH--HHS
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc--ccc
Confidence 22 2234567777777889999999999999999999999964332 2222222211110 000
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC
Q 006019 592 FVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAILREITG 638 (664)
Q Consensus 592 ~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L~~i~~ 638 (664)
... .....++.++.+++.+||+.+|++||++.+|++.|+++..
T Consensus 236 ~~~----~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 236 SIE----ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp CHH----HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cHH----HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 0001123578999999999999999999999999999864
No 205
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=309.41 Aligned_cols=239 Identities=19% Similarity=0.288 Sum_probs=185.8
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCC----Cce
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEE----PFT 447 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~----~~~ 447 (664)
+.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+++++++ +||||+++++++.... ...
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc------cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 348899999999999997 4688999999865432 236789999999999 8999999999997632 226
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhh
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~ 527 (664)
.++||||+++|+|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 799999999999999997555567999999999999999999999998 999999999999999999999999998765
Q ss_pred hh---------hhhhcccccccC-----CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCcccc
Q 006019 528 AM---------AEMAATSKKLSS-----APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFV 593 (664)
Q Consensus 528 ~~---------~~~~~~~pe~~~-----~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (664)
.. ....+.+||... ...++.++|||||||++|||+||+.||... ...+......... .....
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~--~~~~~ 255 (326)
T 2x7f_A 180 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM--HPMRALFLIPRNP--APRLK 255 (326)
T ss_dssp -----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSC--CCCCS
T ss_pred CcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHhhcCc--cccCC
Confidence 32 123456777654 456789999999999999999999999432 2222222222211 11111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 594 DPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 594 d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+..+.+++.+||+.||++||++.++++
T Consensus 256 -------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 256 -------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1122356889999999999999999999987
No 206
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-35 Score=316.16 Aligned_cols=253 Identities=15% Similarity=0.197 Sum_probs=185.3
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC----cee
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP----FTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~ 448 (664)
+.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|++++++++||||+++++++...+. ...
T Consensus 29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ---SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred EeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc---CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 347899999999999997 4689999999854322 23445779999999999999999999999976531 135
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+ +++|.+++.. ..+++.....++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 106 ~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp EEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 8999999 7899998863 45899999999999999999999999 9999999999999999999999999988653
Q ss_pred h------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCC-------------
Q 006019 529 M------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQP------------- 588 (664)
Q Consensus 529 ~------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~------------- 588 (664)
. ....+.+||.... ..++.++||||+||++|||+||+.||... +..+....+......
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS--DHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 2 2334567776554 67899999999999999999999999532 222222211110000
Q ss_pred -------CccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHHhhh
Q 006019 589 -------LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA--ILREIT 637 (664)
Q Consensus 589 -------~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~ 637 (664)
+.......+..........+.+++.+||+.||++|||+.|+++ .++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 0000011111112233456889999999999999999999987 344443
No 207
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=307.02 Aligned_cols=236 Identities=19% Similarity=0.267 Sum_probs=186.0
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+.||+|+||.||+|+.. +|..||+|.+.... ..+++.+|++++++++||||+++++++...+ ..++||
T Consensus 33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 103 (314)
T 3com_A 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT--DLWIVM 103 (314)
T ss_dssp EEEECC----CEEEEEEETTTCCEEEEEEEETTS-------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT--EEEEEE
T ss_pred hheeeccCCCeEEEEEEECCCCCEEEEEecCchH-------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--EEEEEe
Confidence 4488999999999999975 58999999986432 1257899999999999999999999998876 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh---
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM--- 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~--- 529 (664)
||+++|+|.+++.. ....+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 104 EYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR--KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp ECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred ecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999999863 2456899999999999999999999998 99999999999999999999999999865432
Q ss_pred ------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHH
Q 006019 530 ------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEE 603 (664)
Q Consensus 530 ------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 603 (664)
....+.+||......++.++||||||+++|||+||+.||... ...+.......... +.. ..+..
T Consensus 181 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~~~~~~-------~~~-~~~~~ 250 (314)
T 3com_A 181 KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI--HPMRAIFMIPTNPP-------PTF-RKPEL 250 (314)
T ss_dssp CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCC-------CCC-SSGGG
T ss_pred ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHhcCCC-------ccc-CCccc
Confidence 123456788777777899999999999999999999999432 22222221111110 000 11222
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 604 QLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 604 ~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.+..+.+++.+||+.||++||++.++++
T Consensus 251 ~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 251 WSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp SCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 3457899999999999999999999976
No 208
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.8e-35 Score=313.08 Aligned_cols=246 Identities=16% Similarity=0.198 Sum_probs=184.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC----cee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP----FTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~ 448 (664)
+.+.||+|+||.||+|... ++..||||++..... .....+.+.+|+++++.++||||+++++++...+. ...
T Consensus 29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred EeeeeEecCCEEEEEEEECCCCceEEEEEeccccC---ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence 3478999999999999864 688999999875332 13445678999999999999999999999976431 156
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||++ |+|.+.+. ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 106 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 106 YIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred EEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC--eecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 99999997 47888875 34899999999999999999999998 9999999999999999999999999998654
Q ss_pred hh--------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCC-c---------
Q 006019 529 MA--------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL-Q--------- 590 (664)
Q Consensus 529 ~~--------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~-~--------- 590 (664)
.. ...+.+||......++.++|||||||++|||+||+.||... +..+............ .
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~ 256 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT--DHIDQWNKVIEQLGTPCPEFMKKLQPT 256 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence 22 23456788877778899999999999999999999999432 2222222222111000 0
Q ss_pred ---------------------cccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 591 ---------------------QFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 591 ---------------------~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...-+............+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00000000011223567899999999999999999999986
No 209
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3e-35 Score=307.82 Aligned_cols=250 Identities=16% Similarity=0.228 Sum_probs=187.3
Q ss_pred hhcccccCCCeEEEEEEE--CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc---CCCcccceEEEEec---CCC
Q 006019 374 FSNVIGSSPIGTVYKGTL--SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV---NHKNFVNLIGFCEE---EEP 445 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~--~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~~---~~~ 445 (664)
+.+.||+|+||.||+|+. .+++.||+|++........ ....+.+|+++++.+ +||||+++++++.. ...
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS---CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred eeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc---CCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 448899999999999997 4688999999876543221 123466777777666 89999999999872 122
Q ss_pred ceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchh
Q 006019 446 FTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN 525 (664)
Q Consensus 446 ~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~ 525 (664)
...++||||++ |+|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g--i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred ceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 26799999998 69999987655566999999999999999999999998 9999999999999999999999999987
Q ss_pred hhhhh--------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCC-----CCCcc-
Q 006019 526 EIAMA--------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV-----QPLQQ- 591 (664)
Q Consensus 526 ~~~~~--------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~-----~~~~~- 591 (664)
..... ...+.+||......++.++|||||||++|||+||+.||... ...+......... .....
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~ 246 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS--SDVDQLGKILDVIGLPGEEDWPRD 246 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHHHcCCCCcccCccc
Confidence 65422 22345778777777899999999999999999999999432 2222222222100 00000
Q ss_pred ------cc----CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 592 ------FV----DPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 592 ------~~----d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.. ..............+.+++.+||+.||++||++.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00011122234467889999999999999999999984
No 210
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.6e-35 Score=313.47 Aligned_cols=250 Identities=18% Similarity=0.206 Sum_probs=185.3
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC------Cc
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE------PF 446 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~ 446 (664)
+.+.||+|+||.||+|+. .+|+.||+|++....... .....+.+|++++++++||||+++++++.... ..
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 21 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS---SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc---cchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 448899999999999997 468999999986544322 22356889999999999999999999997643 12
Q ss_pred eeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhh
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE 526 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~ 526 (664)
..++||||+++ +|.+.+.. ....+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 57899999985 77777753 3356999999999999999999999998 99999999999999999999999999875
Q ss_pred hhh-------------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCC---
Q 006019 527 IAM-------------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL--- 589 (664)
Q Consensus 527 ~~~-------------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~--- 589 (664)
... ....+.+||.... ..++.++|||||||++|||+||+.||.... ..+............
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT--EQHQLALISQLCGSITPE 251 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChh
Confidence 431 1334567886654 557899999999999999999999995322 222111111100000
Q ss_pred --cccc-----------CCCCCCCCHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 590 --QQFV-----------DPTLSSFDEE-----QLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 590 --~~~~-----------d~~~~~~~~~-----~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
.... .......... ....+.+++.+||+.||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000 0000000000 12457899999999999999999998873
No 211
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.2e-35 Score=308.19 Aligned_cols=243 Identities=14% Similarity=0.188 Sum_probs=184.8
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+. .+++.||||++... ..+.+.+|++++++++ ||||+++++++.+......++|
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEeccc--------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 448899999999999986 56899999998522 2367899999999997 9999999999987443367999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC-ceEecccCchhhhhh-
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY-AAKLSDLSFWNEIAM- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~-~~kl~DfGla~~~~~- 529 (664)
|||+++++|.+++. .+++..+..++.+++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++....
T Consensus 112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC--eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999874 3889999999999999999999999 99999999999999776 899999999975532
Q ss_pred -------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHH-----------HhcC-CCCC
Q 006019 530 -------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAAD-----------YLSG-VQPL 589 (664)
Q Consensus 530 -------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~-----------~~~~-~~~~ 589 (664)
....+.+||.... ..++.++|||||||++|||+||+.||............. .+.. ....
T Consensus 185 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 264 (330)
T 3nsz_A 185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 264 (330)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence 1234556776655 668999999999999999999999995333221111110 0000 0000
Q ss_pred ----ccccC--------CCC-CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 590 ----QQFVD--------PTL-SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 590 ----~~~~d--------~~~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..... ... .........++.+++.+||+.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 000 0111223467899999999999999999999986
No 212
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.5e-35 Score=298.55 Aligned_cols=242 Identities=20% Similarity=0.263 Sum_probs=190.9
Q ss_pred HhhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeE
Q 006019 371 CEDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRM 449 (664)
Q Consensus 371 ~~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~ 449 (664)
.+.+.+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~ 97 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---KDTSTILREVELLKKLDHPNIMKLFEILEDSS--SFY 97 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--EEE
T ss_pred cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch---HHHHHHHHHHHHHHhccCCCccEEEEEEeCCC--eEE
Confidence 3445589999999999999975 68899999987544322 23467999999999999999999999998876 679
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC---CceEecccCchhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED---YAAKLSDLSFWNE 526 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~---~~~kl~DfGla~~ 526 (664)
+|+||+++++|.+++... ..+++..+..++.+++.||+|||+.+ ++||||||+||+++.+ +.+||+|||+++.
T Consensus 98 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 999999999999988633 46899999999999999999999998 9999999999999754 4799999999875
Q ss_pred hhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 527 IAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 527 ~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
... ....+.+||.... .++.++||||||+++|||+||+.||.. ....+.......+..... .+...
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~--~~~~~~~~~~~~~~~~~~---~~~~~ 247 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG--KNEYDILKRVETGKYAFD---LPQWR 247 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHCCCCCC---SGGGT
T ss_pred ecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCCC---chhhh
Confidence 532 2334567776654 478999999999999999999999943 233333333333211110 01111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+.++.+++.+||+.||++||++.++++
T Consensus 248 ----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 248 ----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 12356889999999999999999999987
No 213
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-36 Score=316.89 Aligned_cols=241 Identities=20% Similarity=0.306 Sum_probs=187.5
Q ss_pred hhcccccCCCeEEEEEEE----CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCcee
Q 006019 374 FSNVIGSSPIGTVYKGTL----SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~----~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 448 (664)
+.+.||+|+||.||+|+. .+++.||||++....... .....+.+.+|+++++++ +||||+++++++...+ ..
T Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--~~ 134 (355)
T 1vzo_A 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ-KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET--KL 134 (355)
T ss_dssp EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE-EESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT--EE
T ss_pred EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh-hhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc--eE
Confidence 458899999999999997 368999999986533111 011234577899999999 6999999999998877 67
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+++|+|.+++... ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 135 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~--ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 135 HLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 9999999999999998643 46899999999999999999999998 9999999999999999999999999987542
Q ss_pred h----------hhhhcccccccCC--CCCCcCCcchhhHHHHHHHHhCCCCccCCC--CChHHHHHHHhcCCCCCccccC
Q 006019 529 M----------AEMAATSKKLSSA--PSASLESNVYNFGVLLFEMVTGRLPYLVDN--GSLEDWAADYLSGVQPLQQFVD 594 (664)
Q Consensus 529 ~----------~~~~~~~pe~~~~--~~~s~ksDVySfGvvl~El~tG~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~d 594 (664)
. ....+.+||.... ..++.++|||||||++|||+||+.||.... ....++.........
T Consensus 211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~------- 283 (355)
T 1vzo_A 211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP------- 283 (355)
T ss_dssp GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC-------
T ss_pred cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC-------
Confidence 1 1223456776654 346889999999999999999999996332 233333333332211
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 006019 595 PTLSSFDEEQLETLGELIKSCVRADPEKRP-----TMRDIAAI 632 (664)
Q Consensus 595 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~ev~~~ 632 (664)
.++......+.+++.+||+.||++|| ++.|+++.
T Consensus 284 ----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 284 ----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 12223345688999999999999999 89988764
No 214
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.2e-35 Score=306.41 Aligned_cols=243 Identities=20% Similarity=0.263 Sum_probs=182.9
Q ss_pred hhhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCC---CchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCce
Q 006019 372 EDFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKD---WPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 447 (664)
+.+.+.||+|+||.||+|+.. +++.||||.+....... ........+.+|++++++++||||+++++++...+
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 88 (322)
T 2ycf_A 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED--- 88 (322)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS---
T ss_pred eeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc---
Confidence 345589999999999999975 57899999986533210 01122346889999999999999999999987643
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc---eEecccCch
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA---AKLSDLSFW 524 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~---~kl~DfGla 524 (664)
.++||||+++|+|.+++. ....+++.....++.+++.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 589999999999999886 3457899999999999999999999998 999999999999987654 999999998
Q ss_pred hhhhh--------hhhhccccccc---CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC--ChHHHHHHHhcCCCCCcc
Q 006019 525 NEIAM--------AEMAATSKKLS---SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG--SLEDWAADYLSGVQPLQQ 591 (664)
Q Consensus 525 ~~~~~--------~~~~~~~pe~~---~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~--~~~~~~~~~~~~~~~~~~ 591 (664)
+.... ....+.+||.. ....++.++|||||||++|||+||+.||..... .+.+... .+......
T Consensus 165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~ 241 (322)
T 2ycf_A 165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT---SGKYNFIP 241 (322)
T ss_dssp EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH---HTCCCCCH
T ss_pred eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH---hCccccCc
Confidence 76532 12345677764 345678999999999999999999999954322 2222211 11110000
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 592 FVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 592 ~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
......+..+.+++.+||+.||++||++.++++
T Consensus 242 -------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 242 -------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 000112356889999999999999999999874
No 215
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-35 Score=324.56 Aligned_cols=183 Identities=14% Similarity=0.168 Sum_probs=144.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC---ceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP---FTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~ 449 (664)
+.+.||+|+||.||+|+.. ++..||||++..... .....+.+.+|+++|++++|||||++++++..... ...+
T Consensus 57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE---DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp ECCC-------CEEEEEECC--CEEEEEEECSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc---CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 4578999999999999865 689999999854322 13445789999999999999999999999954321 2579
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+||||+. |+|.+++. ....+++..+..|+.+|+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 134 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~--iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 134 VVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC--cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 9999984 79999886 3456999999999999999999999998 99999999999999999999999999986531
Q ss_pred h------------------------------------hhhccccccc-CCCCCCcCCcchhhHHHHHHHHhC
Q 006019 530 A------------------------------------EMAATSKKLS-SAPSASLESNVYNFGVLLFEMVTG 564 (664)
Q Consensus 530 ~------------------------------------~~~~~~pe~~-~~~~~s~ksDVySfGvvl~El~tG 564 (664)
. +..+.+||.. ....++.++|||||||++|||+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 1 2235678854 556689999999999999999994
No 216
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=320.12 Aligned_cols=247 Identities=15% Similarity=0.219 Sum_probs=173.0
Q ss_pred cccccCCCeEEEEEEEC---CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLS---NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~---~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
++||+|+||.||+|+.. ++..||||++.... ....+.+|+++|++++|||||++++++........++||
T Consensus 27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-------ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp CCCC-----EEEEEEESSSSCCCCEEEEECSSSS-------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 57999999999999975 57889999985332 124688999999999999999999999654433789999
Q ss_pred EecCCCChhhhhccc-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe----cCCCceEeccc
Q 006019 453 EYAPNGTLFEHIHIK-------ESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL----TEDYAAKLSDL 521 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~-------~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl----d~~~~~kl~Df 521 (664)
||++ |+|.+++... ....+++..+..|+.+++.||+|||+.+ |+||||||+|||+ +.++.+||+||
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~--ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC--EeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 9997 5888777421 2235999999999999999999999999 9999999999999 77899999999
Q ss_pred Cchhhhhhh------------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCCh-------HHHHHH
Q 006019 522 SFWNEIAMA------------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSL-------EDWAAD 581 (664)
Q Consensus 522 Gla~~~~~~------------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~-------~~~~~~ 581 (664)
|+++..... ...+.+||.... ..++.++|||||||++|||+||+.||....... .+....
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 999765321 223567886655 458999999999999999999999995332210 111111
Q ss_pred HhcCCC-----CCcccc-------------CCCCCCCC---------HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 582 YLSGVQ-----PLQQFV-------------DPTLSSFD---------EEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 582 ~~~~~~-----~~~~~~-------------d~~~~~~~---------~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
+..... ....+. ........ ......+.+|+.+||+.||++|||+.|+++.
T Consensus 257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111000 000000 00000000 0013467899999999999999999998873
No 217
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.2e-35 Score=301.39 Aligned_cols=243 Identities=21% Similarity=0.318 Sum_probs=190.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCc----hhHHHHHHHHHHHHhccC-CCcccceEEEEecCCCce
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWP----KNLEVQFRKKIDTLSKVN-HKNFVNLIGFCEEEEPFT 447 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~----~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~ 447 (664)
+.+.||+|+||.||+|+.. +++.||||.+......... ....+.+.+|++++++++ ||||+++++++...+ .
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~--~ 98 (298)
T 1phk_A 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT--F 98 (298)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--E
T ss_pred eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC--e
Confidence 3478999999999999975 6889999998754322211 223467889999999996 999999999998776 6
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhh
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~ 527 (664)
.++||||+++|+|.+++.. ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++..
T Consensus 99 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 99 FFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 7999999999999999864 356899999999999999999999998 999999999999999999999999998765
Q ss_pred hhh--------hhhcccccccC------CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCcccc
Q 006019 528 AMA--------EMAATSKKLSS------APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFV 593 (664)
Q Consensus 528 ~~~--------~~~~~~pe~~~------~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (664)
... ...+.+||... ...++.++||||||+++|||+||+.||.. ....+............ .
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--~~~~~~~~~~~~~~~~~---~ 249 (298)
T 1phk_A 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--RKQMLMLRMIMSGNYQF---G 249 (298)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHHTCCCC---C
T ss_pred CCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC--ccHHHHHHHHhcCCccc---C
Confidence 321 23445676542 45578899999999999999999999943 23333333333221111 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 594 DPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 594 d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.+. ....+..+.+++.+||+.||++||++.|+++
T Consensus 250 ~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 250 SPE----WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TTT----GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccc----ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111 1233456899999999999999999999875
No 218
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.8e-35 Score=325.11 Aligned_cols=242 Identities=18% Similarity=0.219 Sum_probs=187.0
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCC--------chhHHHHHHHHHHHHhccCCCcccceEEEEecCC
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDW--------PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE 444 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~--------~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 444 (664)
+.+.||+|+||.||+|+.. ++..+|+|++........ .....+.+.+|++++++++|||||++++++.+..
T Consensus 40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 3478999999999999975 578999999875432210 0123567999999999999999999999998876
Q ss_pred CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC---ceEeccc
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY---AAKLSDL 521 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~---~~kl~Df 521 (664)
..++||||+++|+|.+++... ..+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 120 --~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 120 --YFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp --EEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred --EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC--eEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 779999999999999988643 46999999999999999999999998 99999999999999776 6999999
Q ss_pred Cchhhhhh--------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCcccc
Q 006019 522 SFWNEIAM--------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFV 593 (664)
Q Consensus 522 Gla~~~~~--------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (664)
|+++.... ....+.+||... ..++.++|||||||++|||++|+.||. .....+.......+.......
T Consensus 194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~--~~~~~~~~~~i~~~~~~~~~~- 269 (504)
T 3q5i_A 194 GLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFG--GQNDQDIIKKVEKGKYYFDFN- 269 (504)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSC--CSSHHHHHHHHHHCCCCCCHH-
T ss_pred CCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCC--CCCHHHHHHHHHcCCCCCCcc-
Confidence 99876532 233456777665 458899999999999999999999994 333444444443332111100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 594 DPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 594 d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.. ...+.++.+++.+||+.||.+|||+.|+++
T Consensus 270 --~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 270 --DW----KNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp --HH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --cc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 112356889999999999999999999986
No 219
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.8e-35 Score=319.48 Aligned_cols=187 Identities=15% Similarity=0.161 Sum_probs=155.0
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC---ceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP---FTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~ 449 (664)
+.+.||+|+||.||+|+.. ++..||||++..... .....+.+.+|+++|++++||||+++++++..... ...+
T Consensus 30 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE---DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT---SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc---ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 4588999999999999965 588999999864322 13445789999999999999999999999976531 2579
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+||||++ |+|.+++. ....+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 107 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g--ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 9999997 59999986 3456999999999999999999999999 99999999999999999999999999986532
Q ss_pred h-------------------------------hhhccccccc-CCCCCCcCCcchhhHHHHHHHHhCCCCc
Q 006019 530 A-------------------------------EMAATSKKLS-SAPSASLESNVYNFGVLLFEMVTGRLPY 568 (664)
Q Consensus 530 ~-------------------------------~~~~~~pe~~-~~~~~s~ksDVySfGvvl~El~tG~~P~ 568 (664)
. +..+.+||.. ....++.++|||||||++|||+||..||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 1 2235567763 5566899999999999999999865554
No 220
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.7e-35 Score=321.74 Aligned_cols=186 Identities=19% Similarity=0.223 Sum_probs=159.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc------CCCcccceEEEEecCCCc
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV------NHKNFVNLIGFCEEEEPF 446 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l------~H~niv~l~g~~~~~~~~ 446 (664)
+.+.||+|+||.||+|+.. ++..||||++... ....+++.+|+++++.+ +|+||+++++++...+
T Consensus 101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp EEEEEEESSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred EEEEcccCccEEEEEEEECCCCcEEEEEEECCc------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 4588999999999999865 5889999998532 23456788888888877 5779999999998877
Q ss_pred eeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc--eEecccCch
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA--AKLSDLSFW 524 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~--~kl~DfGla 524 (664)
..++||||+. |+|.+++.......+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++. +||+|||++
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT--EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEccCCCcceEEeecccc
Confidence 7799999996 69999987666667999999999999999999999998 999999999999999987 999999998
Q ss_pred hhhhh------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccC
Q 006019 525 NEIAM------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLV 570 (664)
Q Consensus 525 ~~~~~------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~ 570 (664)
+.... ....+.+||......++.++|||||||++|||+||+.||..
T Consensus 250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 250 CYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp EETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 65532 23456778887777889999999999999999999999953
No 221
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8.5e-35 Score=300.85 Aligned_cols=222 Identities=18% Similarity=0.295 Sum_probs=174.0
Q ss_pred cccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHH-hccCCCcccceEEEEec--CCCceeEEE
Q 006019 376 NVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTL-SKVNHKNFVNLIGFCEE--EEPFTRMMV 451 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~--~~~~~~~lV 451 (664)
+.||+|+||.||+|.. .++..||+|++.. ...+.+|++++ +..+||||+++++++.. .+....++|
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 93 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD----------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 93 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC----------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc----------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEE
Confidence 6799999999999996 4688999999852 13577888888 56699999999999875 112267999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC---CCceEecccCchhhhh
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE---DYAAKLSDLSFWNEIA 528 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~---~~~~kl~DfGla~~~~ 528 (664)
|||+++|+|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 94 MECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp ECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 99999999999998665567999999999999999999999999 999999999999998 7899999999876543
Q ss_pred hhhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCC----HHH
Q 006019 529 MAEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFD----EEQ 604 (664)
Q Consensus 529 ~~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~ 604 (664)
...++.++|||||||++|||+||+.||...... . ... .............+ ...
T Consensus 172 -------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~--~----~~~---~~~~~~~~~~~~~~~~~~~~~ 229 (299)
T 3m2w_A 172 -------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--A----ISP---GMKTRIRMGQYEFPNPEWSEV 229 (299)
T ss_dssp -------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------C---CSCCSSCTTCCSSCHHHHTTS
T ss_pred -------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcch--h----hhH---HHHHHHhhccccCCchhcccC
Confidence 234677899999999999999999999432211 0 000 00011111111112 123
Q ss_pred HHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 605 LETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 605 ~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
+.++.+++.+||+.||++||++.|+++
T Consensus 230 ~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 230 SEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 467899999999999999999999987
No 222
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-35 Score=317.56 Aligned_cols=244 Identities=15% Similarity=0.237 Sum_probs=181.0
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC--------
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE-------- 444 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------- 444 (664)
+.+.||+|+||.||+|+. .+|..||||++..... .+.+|+++|+.++|||||++++++....
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---------hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 448899999999999996 5789999999864322 1337999999999999999999985432
Q ss_pred ----------------------------CceeEEEEEecCCCChhhhhcc--cCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 006019 445 ----------------------------PFTRMMVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGMAYCLEHMHQL 494 (664)
Q Consensus 445 ----------------------------~~~~~lV~Ey~~~GsL~~~l~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~ 494 (664)
....++||||++ |+|.+.+.. .....+++..+..++.+++.||+|||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 113689999998 588777753 2456799999999999999999999999
Q ss_pred CCCeEEeCcCCCCeEec-CCCceEecccCchhhhhhh--------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhC
Q 006019 495 NPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEIAMA--------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTG 564 (664)
Q Consensus 495 ~~~ivHrDLk~~NILld-~~~~~kl~DfGla~~~~~~--------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG 564 (664)
+ |+||||||+|||++ .++.+||+|||+++..... ...+.+||...+ ..++.++|||||||++|||++|
T Consensus 161 g--i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 161 G--ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp T--EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred c--CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 8 99999999999998 6899999999999865322 223557776554 4589999999999999999999
Q ss_pred CCCccCCCCChHHHHHHHhcCC------------CCCccccCCCCCC------CCHHHHHHHHHHHHHhccCCCCCCCCH
Q 006019 565 RLPYLVDNGSLEDWAADYLSGV------------QPLQQFVDPTLSS------FDEEQLETLGELIKSCVRADPEKRPTM 626 (664)
Q Consensus 565 ~~P~~~~~~~~~~~~~~~~~~~------------~~~~~~~d~~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 626 (664)
+.||... ...+.....+... .......-+.... ++...+..+.+++.+||+.||++|||+
T Consensus 239 ~~pf~~~--~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 316 (383)
T 3eb0_A 239 KPLFSGE--TSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINP 316 (383)
T ss_dssp SCSSCCS--SHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred CCCCCCC--ChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence 9999532 2222222111100 0000111111110 223344678999999999999999999
Q ss_pred HHHHH
Q 006019 627 RDIAA 631 (664)
Q Consensus 627 ~ev~~ 631 (664)
.|+++
T Consensus 317 ~e~l~ 321 (383)
T 3eb0_A 317 YEAMA 321 (383)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99974
No 223
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.7e-35 Score=318.22 Aligned_cols=250 Identities=19% Similarity=0.250 Sum_probs=183.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecC----CCcee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEE----EPFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----~~~~~ 448 (664)
+.+.||+|+||.||+|+.. +|..||||++..... .+.+|+++|++++|||||++++++... +....
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 3478999999999999975 589999999864321 234799999999999999999998542 22236
Q ss_pred EEEEEecCCCChhhhhcc--cCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC-CceEecccCchh
Q 006019 449 MMVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED-YAAKLSDLSFWN 525 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~--~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~-~~~kl~DfGla~ 525 (664)
++||||+++ +|.+.+.. .....+++..+..++.|+++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 799999986 66665542 24567999999999999999999999998 9999999999999965 678999999998
Q ss_pred hhhhh--------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcC-----------
Q 006019 526 EIAMA--------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSG----------- 585 (664)
Q Consensus 526 ~~~~~--------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~----------- 585 (664)
..... ...+.+||.... ..++.++|||||||++|||+||+.||.... ..+....++..
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~--~~~~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCSCCHHHHHH
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHh
Confidence 65321 234567887654 468999999999999999999999995332 22211111110
Q ss_pred -CCCCccccCCCCCC------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHHhhh
Q 006019 586 -VQPLQQFVDPTLSS------FDEEQLETLGELIKSCVRADPEKRPTMRDIAA--ILREIT 637 (664)
Q Consensus 586 -~~~~~~~~d~~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~--~L~~i~ 637 (664)
......+.-+.+.. ++.....++.+|+.+||+.||++||++.|+++ .++++.
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 00111111111111 12233467899999999999999999999985 344443
No 224
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5e-35 Score=334.69 Aligned_cols=232 Identities=17% Similarity=0.173 Sum_probs=189.5
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+|+.. +++.||||++....... ....+.+..|..++..+ +||||+++++++.+.+ ..++|
T Consensus 345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~--~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--~~~lV 420 (674)
T 3pfq_A 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--RLYFV 420 (674)
T ss_dssp EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH--TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS--EEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc--HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC--EEEEE
Confidence 4488999999999999975 57889999997532111 12235688899999987 7999999999998776 77999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|||+++|+|.++++.. ..+++..+..++.+|+.||+|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 421 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g--IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTS--EECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 9999999999999743 46999999999999999999999998 99999999999999999999999999885321
Q ss_pred -------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 530 -------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 530 -------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
....+.+||......++.++|||||||++|||+||+.||.. .+..+....++..... ++.
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~--~~~~~~~~~i~~~~~~-----------~p~ 563 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--EDEDELFQSIMEHNVA-----------YPK 563 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC--SSHHHHHHHHHSSCCC-----------CCT
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC--CCHHHHHHHHHhCCCC-----------CCc
Confidence 13345678888888899999999999999999999999943 3444555555443211 222
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCH
Q 006019 603 EQLETLGELIKSCVRADPEKRPTM 626 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RPs~ 626 (664)
....++.+|+.+||+.||++||++
T Consensus 564 ~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 564 SMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred cCCHHHHHHHHHHccCCHHHCCCC
Confidence 334578999999999999999997
No 225
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2e-34 Score=297.80 Aligned_cols=238 Identities=20% Similarity=0.311 Sum_probs=183.4
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC--------
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE-------- 444 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------- 444 (664)
+.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT------EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred hhheeccCCcEEEEEEEEcCCCeEEEEEEEecc------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 4488999999999999964 7899999998642 234567999999999999999999999986531
Q ss_pred ---CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEeccc
Q 006019 445 ---PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL 521 (664)
Q Consensus 445 ---~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~Df 521 (664)
....++||||+++|+|.++++. ....+++..+..++.+++.||+|||+.+ ++||||||+|||++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~--i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC--eecccCCHHhEEEcCCCCEEEeeC
Confidence 2257899999999999999974 3456888999999999999999999998 999999999999999999999999
Q ss_pred Cchhhhhh-----------------------hhhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHH
Q 006019 522 SFWNEIAM-----------------------AEMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLED 577 (664)
Q Consensus 522 Gla~~~~~-----------------------~~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~ 577 (664)
|+++.... ....+.+||.... ..++.++|||||||++|||+| ||.. .....+
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~-~~~~~~ 236 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST-GMERVN 236 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS-HHHHHH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC-chhHHH
Confidence 99875431 1223456776654 368899999999999999998 4421 111122
Q ss_pred HHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 578 WAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 578 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
........... ..+ .++...+..+.+++.+||+.||++||++.++++
T Consensus 237 ~~~~~~~~~~~----~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKKLRSVSIE----FPP---DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHSTTCC----CCT---TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhccccccc----cCc---cccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 22222211111 111 123334456889999999999999999999986
No 226
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.2e-35 Score=305.47 Aligned_cols=244 Identities=14% Similarity=0.180 Sum_probs=177.6
Q ss_pred hcccccCCCeEEEEEEECC-CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC---------
Q 006019 375 SNVIGSSPIGTVYKGTLSN-GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE--------- 444 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~~-~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--------- 444 (664)
.+.||+|+||.||+|+... ++.||+|++.... ....+++.+|++++++++||||+++++++....
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-----PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCS-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-----hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 4789999999999999764 8999999886432 344578999999999999999999999984321
Q ss_pred ---CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec-CCCceEecc
Q 006019 445 ---PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT-EDYAAKLSD 520 (664)
Q Consensus 445 ---~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld-~~~~~kl~D 520 (664)
....++||||++ |+|.+++. ...+++..+..++.+++.||+|||+.+ |+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT--CBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHEEEcCCCCeEEEcc
Confidence 125789999998 69999885 346899999999999999999999998 99999999999998 567999999
Q ss_pred cCchhhhhhh------------hhhcccccccC-CCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC
Q 006019 521 LSFWNEIAMA------------EMAATSKKLSS-APSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ 587 (664)
Q Consensus 521 fGla~~~~~~------------~~~~~~pe~~~-~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~ 587 (664)
||+++..... ...+.+||... ...++.++||||||+++|||+||+.||... ...+..........
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~--~~~~~~~~~~~~~~ 242 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA--HELEQMQLILESIP 242 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS--SHHHHHHHHHHHSC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHhcC
Confidence 9998765321 22345666543 356889999999999999999999999532 22222222221110
Q ss_pred CC------------cc-----ccCCCC--CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 588 PL------------QQ-----FVDPTL--SSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 588 ~~------------~~-----~~d~~~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.. .. ...+.. .......+.++.+++.+||+.||++||++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00 00 000000 0011123457899999999999999999999976
No 227
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-34 Score=304.77 Aligned_cols=248 Identities=17% Similarity=0.235 Sum_probs=190.3
Q ss_pred hhhcccccCCCeEEEEEEE--CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc------ccceEEEEecCC
Q 006019 373 DFSNVIGSSPIGTVYKGTL--SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN------FVNLIGFCEEEE 444 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~--~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~ 444 (664)
.+.+.||+|+||.||+|.. .++..||||++... ....+.+.+|+++++.++|+| ++++++++...+
T Consensus 17 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV------DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred EEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC------CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 3458899999999999986 36889999998532 234567899999999987665 999999998877
Q ss_pred CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC------------
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE------------ 512 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~------------ 512 (664)
..++||||+ +++|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+|||++.
T Consensus 91 --~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 91 --HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK--LTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp --EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEESCCCEEEEEC----
T ss_pred --cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeccccccccCCccc
Confidence 779999999 889999997665567899999999999999999999998 999999999999997
Q ss_pred -------CCceEecccCchhhhhh------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCCh-HHH
Q 006019 513 -------DYAAKLSDLSFWNEIAM------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSL-EDW 578 (664)
Q Consensus 513 -------~~~~kl~DfGla~~~~~------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~-~~~ 578 (664)
++.+||+|||+++.... ....+.+||......++.++|||||||++|||+||+.||....... ...
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 245 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred cccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 67899999999876532 2345667888877788999999999999999999999995332111 111
Q ss_pred HHHHhcCCCC-------Cccc---------------------cCC--CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHH
Q 006019 579 AADYLSGVQP-------LQQF---------------------VDP--TLSSFDEEQLETLGELIKSCVRADPEKRPTMRD 628 (664)
Q Consensus 579 ~~~~~~~~~~-------~~~~---------------------~d~--~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e 628 (664)
.......... .... ..+ ............+.+++.+||+.||++|||+.|
T Consensus 246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 325 (339)
T 1z57_A 246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE 325 (339)
T ss_dssp HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence 1111100000 0000 000 001123445678999999999999999999999
Q ss_pred HHH
Q 006019 629 IAA 631 (664)
Q Consensus 629 v~~ 631 (664)
+++
T Consensus 326 ll~ 328 (339)
T 1z57_A 326 ALK 328 (339)
T ss_dssp HTT
T ss_pred Hhc
Confidence 875
No 228
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=8.5e-35 Score=307.96 Aligned_cols=246 Identities=15% Similarity=0.177 Sum_probs=184.9
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC---CceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE---PFTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~---~~~~~ 449 (664)
+.+.||+|+||.||+|+.. +|+.||||++.... .......+.+|++++++++||||+++++++.... ....+
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD----KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS----SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc----cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 3478999999999999975 68899999985322 2344567899999999999999999999987541 12579
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+||||+. |+|.+++.. ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~--ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 9999997 699988863 46899999999999999999999998 99999999999999999999999999876531
Q ss_pred h-------------------hhhccccccc-CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHh---cCC
Q 006019 530 A-------------------EMAATSKKLS-SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYL---SGV 586 (664)
Q Consensus 530 ~-------------------~~~~~~pe~~-~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~---~~~ 586 (664)
. ...+.+||.. ....++.++|||||||++|||++|+.||.... ..+...... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD--YRHQLLLIFGIIGTP 242 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHHHhCCC
Confidence 1 2235567754 34678899999999999999999999995322 222111111 000
Q ss_pred C---CCccccC----------CCCC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 587 Q---PLQQFVD----------PTLS-----SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 587 ~---~~~~~~d----------~~~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
. ....+.. +... ........++.+++.+||+.||++||++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 0000000 0000 001123456889999999999999999999987
No 229
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.6e-35 Score=303.18 Aligned_cols=238 Identities=19% Similarity=0.258 Sum_probs=185.7
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC--CCcccceEEEEecCCCceeEEE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN--HKNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~~lV 451 (664)
+.+.||+|+||.||+++..++..||||++...... ....+.+.+|++++++++ |+||+++++++...+ ..++|
T Consensus 32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--~~~lv 106 (313)
T 3cek_A 32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD---NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--YIYMV 106 (313)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC---HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS--EEEEE
T ss_pred EEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc---ccchHHHHHHHHHHHhccccCCceEEEEEEeecCC--EEEEE
Confidence 34789999999999999888999999998754322 345578999999999997 599999999998876 67999
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh--
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM-- 529 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~-- 529 (664)
|| +.+|+|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||+++ +.+||+|||+++....
T Consensus 107 ~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 107 ME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG--IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp EC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred Ee-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 99 568899999864 346899999999999999999999998 999999999999974 8999999999876532
Q ss_pred ---------hhhhcccccccCC-----------CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCC
Q 006019 530 ---------AEMAATSKKLSSA-----------PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL 589 (664)
Q Consensus 530 ---------~~~~~~~pe~~~~-----------~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~ 589 (664)
....+.+||.... ..++.++||||||+++|||+||+.||...... .............
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~- 258 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLHAIIDPNHE- 258 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHHHHHCTTSC-
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-HHHHHHHHhcccc-
Confidence 1234556776543 46788999999999999999999999533222 2222222221110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 590 QQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 590 ~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
...+......+.+++.+||+.||++||++.|+++.
T Consensus 259 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 259 --------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp --------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 01111223568899999999999999999999864
No 230
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.3e-35 Score=311.20 Aligned_cols=248 Identities=17% Similarity=0.164 Sum_probs=172.3
Q ss_pred hhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC----Ccee
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE----PFTR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~~ 448 (664)
+.+.||+|+||.||+|.. .+|..||||++..... .....+.+.+|+++++.++||||+++++++.... ....
T Consensus 33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 109 (367)
T 2fst_X 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 109 (367)
T ss_dssp EEEECC----CCEEEEEETTTTEEEEEEECSSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred EeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence 347899999999999985 4689999999864321 1344577899999999999999999999986531 1246
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++|+||+ +++|.+++.. ..+++..+..++.++++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 110 ~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 110 YLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp EEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC--eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 8999999 6899988853 56999999999999999999999998 9999999999999999999999999998654
Q ss_pred hh------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC-CCccccC------
Q 006019 529 MA------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ-PLQQFVD------ 594 (664)
Q Consensus 529 ~~------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~d------ 594 (664)
.. ...+.+||.... ..++.++|||||||++|||+||+.||... +..+....+..... .......
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT--DHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 22 234567776654 67899999999999999999999999532 22222221111000 0000000
Q ss_pred --------CCCCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 595 --------PTLSSF-----DEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 595 --------~~~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
+..... .......+.+|+.+||+.||++|||+.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000000 01123568899999999999999999998763
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.6e-35 Score=311.78 Aligned_cols=247 Identities=15% Similarity=0.201 Sum_probs=184.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc----ee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF----TR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~ 448 (664)
+.+.||+|+||.||+|+.. +|..||||++..... .....+.+.+|+.++++++||||+++++++...+.. ..
T Consensus 46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ---SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred EEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc---chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 3478999999999999965 689999999864332 234567899999999999999999999999865521 23
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||+. |+|.+++. ..+++..+..++.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 123 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp EEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC--CcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 89999997 68888774 34999999999999999999999998 9999999999999999999999999998654
Q ss_pred hh------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCC-cccc-------
Q 006019 529 MA------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPL-QQFV------- 593 (664)
Q Consensus 529 ~~------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~------- 593 (664)
.. ...+.+||.... ..++.++|||||||++|||+||+.||... +..+............ ....
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--DYLDQLTQILKVTGVPGTEFVQKLNDKA 273 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS--SHHHHHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCcHHHHHHhhhhh
Confidence 32 233557776655 67899999999999999999999999432 2222222221100000 0000
Q ss_pred ---------CCC---CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 006019 594 ---------DPT---LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI 632 (664)
Q Consensus 594 ---------d~~---~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~ 632 (664)
... ...........+.+++.+||+.||++||++.|+++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 000111234678999999999999999999999763
No 232
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.1e-34 Score=312.00 Aligned_cols=251 Identities=17% Similarity=0.218 Sum_probs=183.2
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC----ceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP----FTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----~~~~ 449 (664)
+.+.||+|+||.||+|+...+..+|+|++..... ...+|+++++.++|||||++++++...+. ...+
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 4578999999999999998777899998864321 12369999999999999999999965331 1368
Q ss_pred EEEEecCCCChhhhhc-ccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec-CCCceEecccCchhhh
Q 006019 450 MVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNEI 527 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~-~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld-~~~~~kl~DfGla~~~ 527 (664)
+||||++++.+....+ ......+++..+..++.++++||+|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~--ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 9999998754433322 123567999999999999999999999998 99999999999999 8999999999999765
Q ss_pred hhh--------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCC------------
Q 006019 528 AMA--------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV------------ 586 (664)
Q Consensus 528 ~~~--------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~------------ 586 (664)
... ...+.+||...+ ..++.++|||||||++|||++|+.||.... ..+.........
T Consensus 193 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 193 IAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES--GIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred cCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHhhC
Confidence 321 234667886644 458999999999999999999999995332 222111111100
Q ss_pred CCCccccCCCCCC------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHhhh
Q 006019 587 QPLQQFVDPTLSS------FDEEQLETLGELIKSCVRADPEKRPTMRDIAAI--LREIT 637 (664)
Q Consensus 587 ~~~~~~~d~~~~~------~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~i~ 637 (664)
.......-+.... ++.....++.+++.+||+.||++||++.|+++. ++++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 0000000011110 122234578999999999999999999999863 44443
No 233
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=306.41 Aligned_cols=246 Identities=15% Similarity=0.196 Sum_probs=186.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc----ee
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF----TR 448 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~----~~ 448 (664)
+.+.||+|+||.||+|+.. +|..||||++..... .....+.+.+|+.++++++||||+++++++...+.. ..
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ---SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS---SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred EeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 3478999999999999974 689999999864322 234457899999999999999999999999765421 34
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
++||||++ |+|.+++. ..+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 105 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~--ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp EEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 89999997 68988774 34899999999999999999999998 9999999999999999999999999988654
Q ss_pred hh------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC--------------
Q 006019 529 MA------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ-------------- 587 (664)
Q Consensus 529 ~~------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~-------------- 587 (664)
.. ...+.+||.... ..++.++|||||||++|||+||+.||.... ..+..........
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~ 255 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGTEFVQKLNDKA 255 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC--HHHHHHHHHHHHCBCCHHHHTTCSCHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCHHHHHHHhhHH
Confidence 22 233456776554 568899999999999999999999995332 2222211111000
Q ss_pred ------CCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 588 ------PLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 588 ------~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.......+.+..........+.+++.+||+.||++||++.++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000111112222334567899999999999999999999975
No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2e-34 Score=308.79 Aligned_cols=187 Identities=19% Similarity=0.217 Sum_probs=157.2
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CC-----cccceEEEEecCCCc
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HK-----NFVNLIGFCEEEEPF 446 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~~~~~ 446 (664)
+.+.||+|+||.||+|+.. +++.||||++... .....++..|+++++.++ |+ +|+++++++...+
T Consensus 58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 129 (382)
T 2vx3_A 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK------KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN-- 129 (382)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSS------HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT--
T ss_pred EEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc------HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC--
Confidence 4478999999999999965 6789999998532 234567888999988885 55 4999999998877
Q ss_pred eeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec--CCCceEecccCch
Q 006019 447 TRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT--EDYAAKLSDLSFW 524 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld--~~~~~kl~DfGla 524 (664)
..++||||++ |+|.+++.......+++..+..++.+++.||+|||.....|+||||||+|||++ .++.+||+|||++
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 7799999996 599999976655679999999999999999999995433499999999999995 5788999999999
Q ss_pred hhhhh------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCcc
Q 006019 525 NEIAM------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYL 569 (664)
Q Consensus 525 ~~~~~------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~ 569 (664)
+.... ....+.+||......++.++|||||||++|||+||+.||.
T Consensus 209 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 209 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp EETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 76532 2345678888888889999999999999999999999995
No 235
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.7e-35 Score=314.81 Aligned_cols=250 Identities=17% Similarity=0.173 Sum_probs=189.2
Q ss_pred hhhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC--------CCcccceEEEEecC
Q 006019 373 DFSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN--------HKNFVNLIGFCEEE 443 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~--------H~niv~l~g~~~~~ 443 (664)
.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++ |+||+++++++...
T Consensus 40 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred EEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 3458899999999999986 46889999998532 234567899999999996 78899999998732
Q ss_pred --CCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCeEEeCcCCCCeEecCCC------
Q 006019 444 --EPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDY------ 514 (664)
Q Consensus 444 --~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~ivHrDLk~~NILld~~~------ 514 (664)
.....++||||+ +|+|.+++.......+++..+..|+.+++.||+|||+. + |+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g--ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC--EecCCCCHHHeeEeccchhhhhh
Confidence 222679999999 66777777655556799999999999999999999997 8 99999999999999775
Q ss_pred -------------------------------------------ceEecccCchhhhhh------hhhhcccccccCCCCC
Q 006019 515 -------------------------------------------AAKLSDLSFWNEIAM------AEMAATSKKLSSAPSA 545 (664)
Q Consensus 515 -------------------------------------------~~kl~DfGla~~~~~------~~~~~~~pe~~~~~~~ 545 (664)
.+||+|||+++.... ....+.+||......+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCC
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCC
Confidence 799999999876532 2345677888777778
Q ss_pred CcCCcchhhHHHHHHHHhCCCCccCCCCC----hHHHHHHHhc---C------------------CCCCccccCCC----
Q 006019 546 SLESNVYNFGVLLFEMVTGRLPYLVDNGS----LEDWAADYLS---G------------------VQPLQQFVDPT---- 596 (664)
Q Consensus 546 s~ksDVySfGvvl~El~tG~~P~~~~~~~----~~~~~~~~~~---~------------------~~~~~~~~d~~---- 596 (664)
+.++|||||||++|||+||+.||...... ..+....... . ......+.+..
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 99999999999999999999999643221 1111111100 0 00000000000
Q ss_pred ------CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 597 ------LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 597 ------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+......+.+|+.+||+.||++|||+.|+++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01234667778999999999999999999999875
No 236
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.3e-34 Score=303.24 Aligned_cols=240 Identities=20% Similarity=0.285 Sum_probs=172.2
Q ss_pred hcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHH-HHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 375 SNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKID-TLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
.+.||+|+||.||+|... +|+.||||++..... .....++..|+. +++.++||||+++++++...+ ..++||
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~--~~~lv~ 100 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD----EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG--DCWICM 100 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC----HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS--EEEEEE
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccC----chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC--ceEEEE
Confidence 478999999999999975 689999999875321 233445666666 778889999999999998876 679999
Q ss_pred EecCCCChhhhhcc---cCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 453 EYAPNGTLFEHIHI---KESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 453 Ey~~~GsL~~~l~~---~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
||+++ +|.+++.. .....+++..+.+++.+++.||.|||+. + |+||||||+|||++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~--ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS--CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC--EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99985 88776642 2356799999999999999999999997 8 9999999999999999999999999987653
Q ss_pred h--------hhhhccccccc----CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCC
Q 006019 529 M--------AEMAATSKKLS----SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPT 596 (664)
Q Consensus 529 ~--------~~~~~~~pe~~----~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 596 (664)
. ....+.+||.. ....++.++||||||+++|||+||+.||...... .+.......+ ..+.
T Consensus 178 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~-------~~~~ 249 (327)
T 3aln_A 178 DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-FDQLTQVVKG-------DPPQ 249 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCCS-------CCCC
T ss_pred cccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-HHHHHHHhcC-------CCCC
Confidence 2 22345678876 4556789999999999999999999999532211 1111111110 0111
Q ss_pred CC-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 597 LS-SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 597 ~~-~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
+. .........+.+++.+||+.||++||++.++++
T Consensus 250 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11 111223456899999999999999999999975
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2e-34 Score=303.30 Aligned_cols=238 Identities=18% Similarity=0.260 Sum_probs=167.2
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC--CceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE--PFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~~~lV~ 452 (664)
+.||+|+||.||+|+.. +++.||||++.... ....+....++.++||||+++++++.... ....++||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP---------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSH---------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH---------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 56999999999999976 68999999985321 11222333456779999999999986521 12478999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecC---CCceEecccCchhhhhh
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTE---DYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~---~~~~kl~DfGla~~~~~ 529 (664)
||+++|+|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~--ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT--EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 9999999999998655567999999999999999999999998 999999999999986 45699999999875532
Q ss_pred h-------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChH--HHHHHHhcCCCCCccccCCCCCCC
Q 006019 530 A-------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLE--DWAADYLSGVQPLQQFVDPTLSSF 600 (664)
Q Consensus 530 ~-------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~ 600 (664)
. ...+.+||......++.++||||||+++|||+||+.||........ .......... .....+.
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~---- 256 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ---YGFPNPE---- 256 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------CCCTTT----
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccc---cccCchh----
Confidence 2 2345678887777788899999999999999999999953321110 0000000000 0001111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 601 DEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 601 ~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
....+..+.+++.+||+.||++||++.|+++
T Consensus 257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1223456889999999999999999999997
No 238
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.5e-34 Score=306.98 Aligned_cols=254 Identities=16% Similarity=0.205 Sum_probs=175.7
Q ss_pred hcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC-----cee
Q 006019 375 SNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP-----FTR 448 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~-----~~~ 448 (664)
.+.||+|+||.||+|+.. ++..||||++...... ...+.+|++.++.++||||+++++++...+. ...
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF------RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTC------CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc------cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 488999999999999975 6899999988543221 2356788888999999999999999965331 126
Q ss_pred EEEEEecCCCChhhhhcc--cCCCCCCHHHHHHHHHHHHHHHHHhh--cCCCCeEEeCcCCCCeEecC-CCceEecccCc
Q 006019 449 MMVFEYAPNGTLFEHIHI--KESEHLDWGMRLRIAMGMAYCLEHMH--QLNPPIAHNYLNSSAVHLTE-DYAAKLSDLSF 523 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~--~~~~~l~~~~~~~ia~~ia~gL~yLH--~~~~~ivHrDLk~~NILld~-~~~~kl~DfGl 523 (664)
++||||+++ +|.+.+.. .....+++..+..++.+++.||.||| +.+ |+||||||+|||++. ++.+||+|||+
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~--ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN--VCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC--CBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC--eecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 899999986 55444332 24567899999999999999999999 777 999999999999997 89999999999
Q ss_pred hhhhhhh--------hhhcccccccCC-CCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCC--------
Q 006019 524 WNEIAMA--------EMAATSKKLSSA-PSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGV-------- 586 (664)
Q Consensus 524 a~~~~~~--------~~~~~~pe~~~~-~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~-------- 586 (664)
++..... ...+.+||.... ..++.++|||||||++|||+||+.||.... ..+.........
T Consensus 179 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~ 256 (360)
T 3e3p_A 179 AKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN--SAGQLHEIVRVLGCPSREVL 256 (360)
T ss_dssp CBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCHHHH
T ss_pred ceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC--hHHHHHHHHHHcCCCCHHHH
Confidence 9765322 334567886644 448999999999999999999999995322 222222111100
Q ss_pred ------CCCccccCCC-------CCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHhhhCC
Q 006019 587 ------QPLQQFVDPT-------LSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAI--LREITGI 639 (664)
Q Consensus 587 ------~~~~~~~d~~-------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~--L~~i~~~ 639 (664)
.......+.. ..........++.+++.+||+.||++|||+.|+++. ++++...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 0000000000 011122245679999999999999999999999863 5555443
No 239
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.2e-34 Score=306.40 Aligned_cols=248 Identities=15% Similarity=0.168 Sum_probs=184.6
Q ss_pred hhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCC---ceeE
Q 006019 374 FSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEP---FTRM 449 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~---~~~~ 449 (664)
+.+.||+|+||.||+|+.. ++..||||++.... .....+.+.+|++++++++||||+++++++..... ...+
T Consensus 31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE----HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT----CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred EEEEeecCCCeEEEEEEECCCCeEEEEEEecccc----CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 4478999999999999965 68899999986422 13445789999999999999999999999965421 2469
Q ss_pred EEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhh
Q 006019 450 MVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM 529 (664)
Q Consensus 450 lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~ 529 (664)
+|+||++ |+|.+++.. ..+++..+..|+.+++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 107 iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~--ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC--eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 9999997 599998863 35999999999999999999999998 99999999999999999999999999876532
Q ss_pred h------------hhhccccccc-CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCC-ChHHHHHHHhcCCCC--C----
Q 006019 530 A------------EMAATSKKLS-SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNG-SLEDWAADYLSGVQP--L---- 589 (664)
Q Consensus 530 ~------------~~~~~~pe~~-~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~-~~~~~~~~~~~~~~~--~---- 589 (664)
. ...+.+||.. ....++.++|||||||++|||+||+.||..... .....+......... .
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 2 2335567754 344578999999999999999999999953221 111111111100000 0
Q ss_pred --------ccccCCCCC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 590 --------QQFVDPTLS---SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 590 --------~~~~d~~~~---~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
.....+... .........+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000 001122356889999999999999999999986
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.4e-34 Score=297.75 Aligned_cols=239 Identities=17% Similarity=0.230 Sum_probs=170.7
Q ss_pred hcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEEE
Q 006019 375 SNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.++..+++.++||||+++++++.+.+ ..++|||
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~--~~~lv~e 104 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN---KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT--DVFIAME 104 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSC---HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--EEEEEEC
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC--cEEEEEe
Confidence 478999999999999975 689999999864332 1223344555666788899999999999998877 7799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
|+ ++.+.. +.......+++..+..++.+++.||+|||+. + ++||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~-~~~~~~-l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~--i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 105 LM-GTCAEK-LKKRMQGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp CC-SEEHHH-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cc-CCcHHH-HHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC--EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 99 444444 4333346789999999999999999999984 8 999999999999999999999999998765321
Q ss_pred ------hhhccccccc-----CCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCC
Q 006019 531 ------EMAATSKKLS-----SAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSS 599 (664)
Q Consensus 531 ------~~~~~~pe~~-----~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 599 (664)
...+.+||.. ....++.++|||||||++|||+||+.||.... ...+............ .+..
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~----~~~~-- 253 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-TDFEVLTKVLQEEPPL----LPGH-- 253 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-SHHHHHHHHHHSCCCC----CCSS--
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-ccHHHHHHHhccCCCC----CCcc--
Confidence 2345567766 34567889999999999999999999995322 2233333333321110 0111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 600 FDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 600 ~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...+..+.+++.+||+.||++||++.++++
T Consensus 254 --~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 254 --MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 112346889999999999999999999986
No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.1e-34 Score=312.38 Aligned_cols=235 Identities=16% Similarity=0.253 Sum_probs=177.6
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEEEEe
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMVFEY 454 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~Ey 454 (664)
+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+.+ ..++||||
T Consensus 21 ~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--~~~lv~E~ 90 (434)
T 2rio_A 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLID--------FCDIALMEIKLLTESDDHPNVIRYYCSETTDR--FLYIALEL 90 (434)
T ss_dssp EEEEECSTTCEEEEEESSSSEEEEEEEEGG--------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--EEEEEECC
T ss_pred CeEeeCCCeEEEEEEEECCeEEEEEEEcHH--------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC--eEEEEEec
Confidence 679999999998776678999999988532 234678999999986 8999999999998776 77999999
Q ss_pred cCCCChhhhhcccCCCC-----CCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCC-------------Cce
Q 006019 455 APNGTLFEHIHIKESEH-----LDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTED-------------YAA 516 (664)
Q Consensus 455 ~~~GsL~~~l~~~~~~~-----l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~-------------~~~ 516 (664)
+. |+|.+++....... ..+..+..|+.+++.||+|||+.+ |+||||||+|||++.+ +.+
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC--ccccCCChHhEEEecCcccccccccCCCceEE
Confidence 95 69999986432211 133345789999999999999998 9999999999999754 589
Q ss_pred EecccCchhhhhh-------------hhhhcccccccCC-------CCCCcCCcchhhHHHHHHHHh-CCCCccCCCCCh
Q 006019 517 KLSDLSFWNEIAM-------------AEMAATSKKLSSA-------PSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSL 575 (664)
Q Consensus 517 kl~DfGla~~~~~-------------~~~~~~~pe~~~~-------~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~ 575 (664)
||+|||+++.... ....+.+||.... ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 9999999876532 1234557776643 568899999999999999999 999995332221
Q ss_pred HHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 576 EDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
. ............ ..........++.+++.+||+.||++||++.+|++
T Consensus 248 ~----~i~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 S----NIIRGIFSLDEM----KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H----HHHHTCCCCCCC----TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H----HHhcCCCCcccc----cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1 122221111111 01124556778999999999999999999999975
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=307.57 Aligned_cols=236 Identities=22% Similarity=0.367 Sum_probs=178.3
Q ss_pred HhhhhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCc-hhHHHHHHHHHHHHhcc----CCCcccceEEEEecCC
Q 006019 371 CEDFSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWP-KNLEVQFRKKIDTLSKV----NHKNFVNLIGFCEEEE 444 (664)
Q Consensus 371 ~~~~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~-~~~~~~f~~E~~~l~~l----~H~niv~l~g~~~~~~ 444 (664)
.+.+.+.||+|+||.||+|+. .+++.||||++......... ......+.+|++++.++ +|+||+++++++...+
T Consensus 32 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~ 111 (312)
T 2iwi_A 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE 111 (312)
T ss_dssp -CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC----
T ss_pred ceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC
Confidence 344568999999999999986 46889999998654322111 01223467899999998 8999999999998776
Q ss_pred CceeEEEEEe-cCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec-CCCceEecccC
Q 006019 445 PFTRMMVFEY-APNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLS 522 (664)
Q Consensus 445 ~~~~~lV~Ey-~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld-~~~~~kl~DfG 522 (664)
..++|+|| +++++|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+||+++ .++.+||+|||
T Consensus 112 --~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 112 --GFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT--EECCCCSGGGEEEETTTTEEEECCCS
T ss_pred --eEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--eeecCCChhhEEEeCCCCeEEEEEcc
Confidence 56899999 799999999864 346899999999999999999999998 99999999999999 89999999999
Q ss_pred chhhhhhh-------hhhcccccccCCCCC-CcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccC
Q 006019 523 FWNEIAMA-------EMAATSKKLSSAPSA-SLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVD 594 (664)
Q Consensus 523 la~~~~~~-------~~~~~~pe~~~~~~~-s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d 594 (664)
+++..... ...+.+||....... +.++||||||+++|||+||+.||... .+ ......
T Consensus 186 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~----~~----~~~~~~------- 250 (312)
T 2iwi_A 186 SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD----QE----ILEAEL------- 250 (312)
T ss_dssp SCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HH----HHHTCC-------
T ss_pred hhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh----HH----Hhhhcc-------
Confidence 98765322 223455665443333 45899999999999999999999421 11 111100
Q ss_pred CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 595 PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 595 ~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
..+......+.+++.+||+.||++||++.|+++
T Consensus 251 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 251 ----HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112223356889999999999999999999987
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=9.3e-34 Score=299.78 Aligned_cols=248 Identities=15% Similarity=0.211 Sum_probs=187.4
Q ss_pred hhhcccccCCCeEEEEEEEC-CC-cEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc------ccceEEEEecCC
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NG-VEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN------FVNLIGFCEEEE 444 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~-~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~ 444 (664)
.+.+.||+|+||.||+|+.. ++ ..||+|++... ....+.+.+|++++++++|++ ++.+.+++...+
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 22 EIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV------GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred EEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc------ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 34588999999999999964 34 68999998532 234567889999999998776 899999998877
Q ss_pred CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEe--------------
Q 006019 445 PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHL-------------- 510 (664)
Q Consensus 445 ~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILl-------------- 510 (664)
..++||||+ +|+|.+++.......+++..+..|+.+++.||+|||+.+ |+||||||+|||+
T Consensus 96 --~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~--ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 96 --HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp --EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT--EECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred --eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC--cccCCCCHHHEEEeccccccccccccc
Confidence 779999999 678888876555567999999999999999999999998 9999999999999
Q ss_pred -----cCCCceEecccCchhhhhh------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCC-hHHH
Q 006019 511 -----TEDYAAKLSDLSFWNEIAM------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGS-LEDW 578 (664)
Q Consensus 511 -----d~~~~~kl~DfGla~~~~~------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~-~~~~ 578 (664)
+.++.+||+|||+++.... ....+.+||......++.++|||||||++|||+||+.||...... ....
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 250 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 6788999999999875432 234566788887788899999999999999999999999532211 1111
Q ss_pred HHHHhcCC--------CCCccccC--------------------C--CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHH
Q 006019 579 AADYLSGV--------QPLQQFVD--------------------P--TLSSFDEEQLETLGELIKSCVRADPEKRPTMRD 628 (664)
Q Consensus 579 ~~~~~~~~--------~~~~~~~d--------------------~--~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e 628 (664)
........ ........ + ............+.+++.+||+.||++|||+.|
T Consensus 251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 330 (355)
T 2eu9_A 251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE 330 (355)
T ss_dssp HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence 11111000 00000000 0 000112334567899999999999999999999
Q ss_pred HHH
Q 006019 629 IAA 631 (664)
Q Consensus 629 v~~ 631 (664)
+++
T Consensus 331 ~l~ 333 (355)
T 2eu9_A 331 ALL 333 (355)
T ss_dssp HTT
T ss_pred Hhc
Confidence 874
No 244
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.3e-34 Score=306.91 Aligned_cols=250 Identities=18% Similarity=0.244 Sum_probs=189.4
Q ss_pred hhhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-----------CCcccceEEEE
Q 006019 373 DFSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-----------HKNFVNLIGFC 440 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~ 440 (664)
.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++ |+||+++++++
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 22 ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred EEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC------ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 3558899999999999996 46899999998532 234567889999999886 89999999998
Q ss_pred ecCC--CceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCCeEEeCcCCCCeEec------
Q 006019 441 EEEE--PFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLT------ 511 (664)
Q Consensus 441 ~~~~--~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~-~~~ivHrDLk~~NILld------ 511 (664)
...+ ....++||||+ +++|.+++.......+++..+..|+.+++.||+|||+. + |+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~--ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC--EECSCCSGGGEEEEEEETTT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC--EEecCCChHHeEEeccCCCc
Confidence 7543 22568999999 89999999765566799999999999999999999997 8 99999999999995
Q ss_pred CCCceEecccCchhhhhh------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCC----hHHHHHH
Q 006019 512 EDYAAKLSDLSFWNEIAM------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGS----LEDWAAD 581 (664)
Q Consensus 512 ~~~~~kl~DfGla~~~~~------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~----~~~~~~~ 581 (664)
.++.+||+|||+++.... ....+.+||......++.++|||||||++|||+||+.||...... ..+....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 252 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252 (373)
T ss_dssp TEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred CcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHH
Confidence 445899999999876532 234566788877778899999999999999999999999643211 1111111
Q ss_pred Hhc---------------------CCCCCccccCC----------CCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 006019 582 YLS---------------------GVQPLQQFVDP----------TLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIA 630 (664)
Q Consensus 582 ~~~---------------------~~~~~~~~~d~----------~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 630 (664)
... .......+... ....++.....++.+++.+||+.||++|||+.|++
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 332 (373)
T 1q8y_A 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 332 (373)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHh
Confidence 110 00000000000 01124567778899999999999999999999998
Q ss_pred H
Q 006019 631 A 631 (664)
Q Consensus 631 ~ 631 (664)
+
T Consensus 333 ~ 333 (373)
T 1q8y_A 333 N 333 (373)
T ss_dssp T
T ss_pred h
Confidence 7
No 245
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=5e-35 Score=305.67 Aligned_cols=234 Identities=20% Similarity=0.350 Sum_probs=183.4
Q ss_pred hhhcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCch-hHHHHHHHHHHHHhccC--CCcccceEEEEecCCCcee
Q 006019 373 DFSNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPK-NLEVQFRKKIDTLSKVN--HKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~-~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~~ 448 (664)
.+.+.||+|+||.||+|+. .+++.||||.+.......... ...+.+.+|++++++++ |+||+++++++...+ ..
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--~~ 123 (320)
T 3a99_A 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--SF 123 (320)
T ss_dssp EEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS--EE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC--cE
Confidence 3458899999999999986 468999999997654332110 11245778999999996 599999999998877 67
Q ss_pred EEEEEecCC-CChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec-CCCceEecccCchhh
Q 006019 449 MMVFEYAPN-GTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT-EDYAAKLSDLSFWNE 526 (664)
Q Consensus 449 ~lV~Ey~~~-GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld-~~~~~kl~DfGla~~ 526 (664)
++|+||+.+ ++|.+++.. ...+++..+..++.+++.||+|||+.+ |+||||||+|||++ +++.+||+|||+++.
T Consensus 124 ~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 124 VLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp EEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC--cEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 999999986 899999864 346899999999999999999999998 99999999999999 789999999999876
Q ss_pred hhh-------hhhhcccccccCCCC-CCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCC
Q 006019 527 IAM-------AEMAATSKKLSSAPS-ASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLS 598 (664)
Q Consensus 527 ~~~-------~~~~~~~pe~~~~~~-~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 598 (664)
... ....+.+||...... .+.++||||||+++|||+||+.||... .+ ....... .
T Consensus 200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----~~----~~~~~~~----~----- 262 (320)
T 3a99_A 200 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EE----IIRGQVF----F----- 262 (320)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----HH----HHHCCCC----C-----
T ss_pred cccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh----hh----hhccccc----c-----
Confidence 532 223455677654434 367899999999999999999999421 11 1111100 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 599 SFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 599 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
+...+.++.+++.+||+.||++||++.|+++
T Consensus 263 --~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 263 --RQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp --SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122356889999999999999999999876
No 246
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=306.54 Aligned_cols=233 Identities=18% Similarity=0.268 Sum_probs=173.5
Q ss_pred hcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCceeEEEEE
Q 006019 375 SNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
.+.||+|+||.||.....+++.||||++..... ..+.+|+++++++ +|||||++++++.+.. ..++|||
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~--~~~lv~E 98 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--------SFADREVQLLRESDEHPNVIRYFCTEKDRQ--FQYIAIE 98 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--------EECHHHHHHHHHSCCCTTBCCEEEEEEETT--EEEEEEE
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--------HHHHHHHHHHHhccCCCCcCeEEEEEecCC--EEEEEEE
Confidence 378999999996655556789999999854221 2356899999999 7999999999998877 6799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEec-----CCCceEecccCchhhhh
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLT-----EDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld-----~~~~~kl~DfGla~~~~ 528 (664)
|++ |+|.+++.... ....+..+..++.+++.||+|||+.+ |+||||||+|||++ .+..+||+|||+++...
T Consensus 99 ~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 99 LCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT--CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc--CEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 996 69999987433 23444456789999999999999999 99999999999994 33468899999987653
Q ss_pred h------------hhhhcccccccC---CCCCCcCCcchhhHHHHHHHHh-CCCCccCCCCChHHHHHHHhcCCCCCccc
Q 006019 529 M------------AEMAATSKKLSS---APSASLESNVYNFGVLLFEMVT-GRLPYLVDNGSLEDWAADYLSGVQPLQQF 592 (664)
Q Consensus 529 ~------------~~~~~~~pe~~~---~~~~s~ksDVySfGvvl~El~t-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (664)
. ....+.+||... ...++.++|||||||++|||+| |+.||..... ......... ....
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---~~~~~~~~~-~~~~-- 248 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---RQANILLGA-CSLD-- 248 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---HHHHHHTTC-CCCT--
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---HHHHHHhcc-CCcc--
Confidence 2 123455788765 4556789999999999999999 9999843221 111111111 1110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 006019 593 VDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAA 631 (664)
Q Consensus 593 ~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~ 631 (664)
...........+.+++.+||+.||++||++.+|++
T Consensus 249 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 ----CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ----TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 11112334556889999999999999999999983
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.4e-34 Score=318.96 Aligned_cols=260 Identities=18% Similarity=0.242 Sum_probs=194.9
Q ss_pred hhhcccccCCCeEEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCC----Cce
Q 006019 373 DFSNVIGSSPIGTVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEE----PFT 447 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~ 447 (664)
.+.+.||+|+||.||+|... +|..||||++.... .....+.|.+|++++++++||||+++++++.... ...
T Consensus 17 ~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~----~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL----SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC----CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC----CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 45588999999999999964 68899999875421 2345678999999999999999999999976511 125
Q ss_pred eEEEEEecCCCChhhhhcccC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCc---eEecccCc
Q 006019 448 RMMVFEYAPNGTLFEHIHIKE-SEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYA---AKLSDLSF 523 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~-~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~---~kl~DfGl 523 (664)
.++||||+++|+|.+++.... ...+++..+..|+.+++.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g--IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT--BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC--CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 689999999999999987532 346889999999999999999999998 999999999999997664 99999999
Q ss_pred hhhhhhh--------hhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCC---CCccc
Q 006019 524 WNEIAMA--------EMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQ---PLQQF 592 (664)
Q Consensus 524 a~~~~~~--------~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~---~~~~~ 592 (664)
++..... ...+.+||......++.++|||||||++|||+||+.||... ....+|......... .....
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-~~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN-WQPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS-CHHHHSSTTCC------CCSCCC
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc-cchhhhhhhhhcccchhhhhhhh
Confidence 9875432 23456788888888999999999999999999999999532 122222211110000 00000
Q ss_pred c------C---CCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHH-----HHHHHHhhhCC
Q 006019 593 V------D---PTLSSFDEEQLETLGELIKSCVRADPEKRPTMRD-----IAAILREITGI 639 (664)
Q Consensus 593 ~------d---~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e-----v~~~L~~i~~~ 639 (664)
. . +.........+..+.+++.+||+.||++||++.+ ..+.++++...
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 0 0 1111234556788999999999999999999988 56777777654
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.9e-33 Score=320.80 Aligned_cols=234 Identities=17% Similarity=0.255 Sum_probs=181.5
Q ss_pred hhhcccccCCCeEEEEEEEC--CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEecCCCc---e
Q 006019 373 DFSNVIGSSPIGTVYKGTLS--NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPF---T 447 (664)
Q Consensus 373 ~~~~~iG~G~~G~Vy~g~~~--~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---~ 447 (664)
.+.+.||+|+||.||+|+.. +++.||||++.... .......|.+|++++++++|||||++++++...+.. .
T Consensus 83 ~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 83 EVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG----DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp EEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC----CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred EEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC----CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 34588999999999999975 58999999875322 134456799999999999999999999999875521 1
Q ss_pred eEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhh
Q 006019 448 RMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~ 527 (664)
.++||||+++++|.+++.. .++|..+..|+.+|+.||+|||+.+ |+||||||+|||++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g--iiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG--LVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT--EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC--CeecccChHHeEEeCC-cEEEEecccchhc
Confidence 5999999999999987742 6999999999999999999999999 9999999999999986 8999999998866
Q ss_pred hh-----hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCccCCCCChHHHHHHHhcCCCCCccccCCCCCCCCH
Q 006019 528 AM-----AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDE 602 (664)
Q Consensus 528 ~~-----~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 602 (664)
.. ....+.+||..... .+.++|||||||++|||++|..|+.... . .... . .....
T Consensus 232 ~~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~----------~---~~~~----~--~~~~~ 291 (681)
T 2pzi_A 232 NSFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRY----------V---DGLP----E--DDPVL 291 (681)
T ss_dssp TCCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEE----------C---SSCC----T--TCHHH
T ss_pred ccCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccc----------c---cccc----c--ccccc
Confidence 43 23345667765443 3889999999999999999998873210 0 0000 0 00011
Q ss_pred HHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHhhh
Q 006019 603 EQLETLGELIKSCVRADPEKRP-TMRDIAAILREIT 637 (664)
Q Consensus 603 ~~~~~l~~l~~~Cl~~~P~~RP-s~~ev~~~L~~i~ 637 (664)
.....+.+++.+||+.||++|| +++++...|..+.
T Consensus 292 ~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 292 KTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp HHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 2335788999999999999999 5777777777653
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98 E-value=2.8e-33 Score=302.85 Aligned_cols=234 Identities=13% Similarity=0.163 Sum_probs=167.3
Q ss_pred hcccccCCCeEEEEEEE-CCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCC-Ccccc----------eE-----
Q 006019 375 SNVIGSSPIGTVYKGTL-SNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNH-KNFVN----------LI----- 437 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~-~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H-~niv~----------l~----- 437 (664)
.+.||+|+||.||+|+. .+|+.||||++....... ....+.|.+|+.+++.++| +|... +.
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~--~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP--SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP 160 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECC
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc--HHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccC
Confidence 47899999999999995 468999999886433222 2234679999999999987 32211 11
Q ss_pred ------EEEecCC---CceeEEEEEecCCCChhhhhc-----ccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCc
Q 006019 438 ------GFCEEEE---PFTRMMVFEYAPNGTLFEHIH-----IKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYL 503 (664)
Q Consensus 438 ------g~~~~~~---~~~~~lV~Ey~~~GsL~~~l~-----~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDL 503 (664)
.+..... ....+++|+++ +|+|.+++. ......+++..++.|+.|++.||+|||+.+ |+||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--iiHrDi 237 (413)
T 3dzo_A 161 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYL 237 (413)
T ss_dssp C---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT--EECSCC
T ss_pred CCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--cccCCc
Confidence 1111111 11345666655 689998884 223456889999999999999999999998 999999
Q ss_pred CCCCeEecCCCceEecccCchhhhhhh-----hhhccccccc----------CCCCCCcCCcchhhHHHHHHHHhCCCCc
Q 006019 504 NSSAVHLTEDYAAKLSDLSFWNEIAMA-----EMAATSKKLS----------SAPSASLESNVYNFGVLLFEMVTGRLPY 568 (664)
Q Consensus 504 k~~NILld~~~~~kl~DfGla~~~~~~-----~~~~~~pe~~----------~~~~~s~ksDVySfGvvl~El~tG~~P~ 568 (664)
||+|||++.++.+||+|||+++..... ...+.+||.. ....++.++|||||||++|||+||+.||
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf 317 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN 317 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999998755321 1456678876 4555788999999999999999999999
Q ss_pred cCCCCChHHHHHHHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 006019 569 LVDNGSLEDWAADYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIA 630 (664)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~ 630 (664)
..... . .....+.. .....+ ..+.+++.+||+.||++||++.+++
T Consensus 318 ~~~~~--~----------~~~~~~~~-~~~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 318 TDDAA--L----------GGSEWIFR-SCKNIP----QPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp CTTGG--G----------SCSGGGGS-SCCCCC----HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred CCcch--h----------hhHHHHHh-hcccCC----HHHHHHHHHHccCChhhCcCHHHHH
Confidence 43210 0 11111111 111222 5689999999999999999966553
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=2.4e-32 Score=287.34 Aligned_cols=238 Identities=12% Similarity=0.121 Sum_probs=176.8
Q ss_pred hhhhcccccCCCeEEEEEEECCCcEEEEEEeeecccCC---CchhHHHHHHHHHHHHhccC---------CCcccceEEE
Q 006019 372 EDFSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKD---WPKNLEVQFRKKIDTLSKVN---------HKNFVNLIGF 439 (664)
Q Consensus 372 ~~~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~---~~~~~~~~f~~E~~~l~~l~---------H~niv~l~g~ 439 (664)
+.+.+.||+|+||.||+|+. +|+.||||++....... ......+.+.+|++++++++ |||||++.++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~ 100 (336)
T 2vuw_A 22 LQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSV 100 (336)
T ss_dssp HHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEE
T ss_pred chheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcce
Confidence 44568999999999999998 68999999998654321 11223467889999998886 7777777776
Q ss_pred EecC----------------------------CCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHh
Q 006019 440 CEEE----------------------------EPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHM 491 (664)
Q Consensus 440 ~~~~----------------------------~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yL 491 (664)
+... +....++||||+++|++.+.+.. ..+++.....|+.|++.||+||
T Consensus 101 ~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 101 HCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHH
T ss_pred eEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHH
Confidence 5310 02267999999999987777642 5689999999999999999999
Q ss_pred h-cCCCCeEEeCcCCCCeEecCCC--------------------ceEecccCchhhhhhh----hhhcccccccCCCCCC
Q 006019 492 H-QLNPPIAHNYLNSSAVHLTEDY--------------------AAKLSDLSFWNEIAMA----EMAATSKKLSSAPSAS 546 (664)
Q Consensus 492 H-~~~~~ivHrDLk~~NILld~~~--------------------~~kl~DfGla~~~~~~----~~~~~~pe~~~~~~~s 546 (664)
| +.+ |+||||||+|||++.++ .+||+|||+++..... ...+.+||...+.. +
T Consensus 178 H~~~~--ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~ 254 (336)
T 2vuw_A 178 EASLR--FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-D 254 (336)
T ss_dssp HHHHC--CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-S
T ss_pred HHhCC--EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-c
Confidence 9 898 99999999999999887 9999999999876432 34566788877555 8
Q ss_pred cCCcchhhHHH-HHHHHhCCCCccCCCCChHHHHH----HHhcCCCCCccccCCCCCCCCHHHHHHHHHHHHHhccCCCC
Q 006019 547 LESNVYNFGVL-LFEMVTGRLPYLVDNGSLEDWAA----DYLSGVQPLQQFVDPTLSSFDEEQLETLGELIKSCVRADPE 621 (664)
Q Consensus 547 ~ksDVySfGvv-l~El~tG~~P~~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~ 621 (664)
.++||||+|++ .+++++|..||.. ..|.. ...... .. ..............++.+++.+||+.|
T Consensus 255 ~~~Diwsl~~~~~~~~~~g~~p~~~-----~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~s~~~~dli~~~L~~d-- 323 (336)
T 2vuw_A 255 YQFDIYRLMKKENNNRWGEYHPYSN-----VLWLHYLTDKMLKQM-TF---KTKCNTPAMKQIKRKIQEFHRTMLNFS-- 323 (336)
T ss_dssp HHHHHHHHHHHHHTTCTTSCCTHHH-----HHHHHHHHHHHHHTC-CC---SSCCCSHHHHHHHHHHHHHHHHGGGSS--
T ss_pred cceehhhhhCCCCcccccccCCCcc-----hhhhhHHHHhhhhhh-cc---CcccchhhhhhcCHHHHHHHHHHhccC--
Confidence 89999998777 7778899999831 11211 111110 00 011111223457788999999999976
Q ss_pred CCCCHHHHH
Q 006019 622 KRPTMRDIA 630 (664)
Q Consensus 622 ~RPs~~ev~ 630 (664)
|++|++
T Consensus 324 ---sa~e~l 329 (336)
T 2vuw_A 324 ---SATDLL 329 (336)
T ss_dssp ---SHHHHH
T ss_pred ---CHHHHH
Confidence 888877
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=1.2e-25 Score=251.64 Aligned_cols=183 Identities=12% Similarity=0.074 Sum_probs=123.1
Q ss_pred cccccCCCeEEEEEE-ECCCcEEEEEEeeecccCCC-----chhHHHHHHHHHHHHhcc-CCCcccceEEEEecCCCcee
Q 006019 376 NVIGSSPIGTVYKGT-LSNGVEIAVASVSVASAKDW-----PKNLEVQFRKKIDTLSKV-NHKNFVNLIGFCEEEEPFTR 448 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~-~~~~~~vavk~~~~~~~~~~-----~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~~ 448 (664)
...+.|++|.+++++ +--|..+++|.+........ .....++|.+|+++|+++ .|+||+++++++.+.+ ..
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~--~~ 317 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ--SG 317 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS--EE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC--EE
Confidence 346777777776655 33588899999875432211 123346799999999999 6999999999999877 78
Q ss_pred EEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhh
Q 006019 449 MMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA 528 (664)
Q Consensus 449 ~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~ 528 (664)
||||||++||+|.+++.. ...++.. +|+.||+.||+|+|+++ ||||||||+|||+++++.+||+|||+++...
T Consensus 318 yLVMEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~G--IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQG--FWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEEEECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTT--CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEEEecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCC--ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999999964 3456653 58999999999999999 9999999999999999999999999998653
Q ss_pred h---------hhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCc
Q 006019 529 M---------AEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPY 568 (664)
Q Consensus 529 ~---------~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~ 568 (664)
. .+..+.+||...+ .+..++|+||+|++++++.++..|+
T Consensus 391 ~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 2 2234456666543 3556778888888877776655443
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.91 E-value=1.4e-24 Score=225.67 Aligned_cols=157 Identities=28% Similarity=0.492 Sum_probs=147.5
Q ss_pred cCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCc--cceeEecC----CcEEEEEeCCCCccc--cccccccCCC
Q 006019 26 WSLNDEGLALLRLRERVVRDPYGALTSWRSCDTENNPCS--WFGVECSD----GKVVNLNLKDLCLEG--TLAPEIQSLT 97 (664)
Q Consensus 26 ~~~~~~~~all~~k~~~~~~~~~~l~~W~~~~~~~~~C~--w~gv~C~~----~~v~~l~L~~~~l~g--~ip~~~~~l~ 97 (664)
.|.++|++||++||+++. ||. .+.+|. .+.+||. |.||+|+. ++|+.|+|++++++| .+|+.+++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~---~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~ 76 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWL---PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCC---TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCC---CCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCC
Confidence 367899999999999985 665 688996 4678998 99999984 799999999999999 9999999999
Q ss_pred CCCEEEccC-CcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeC
Q 006019 98 HIKSIILRN-NSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQV 176 (664)
Q Consensus 98 ~L~~l~L~~-N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l 176 (664)
+|++|+|++ |.+.|.+|..|+++++|++|+|++|+++|.+|..++.+++|++|+|++|.++|.+|..+.++++|++|+|
T Consensus 77 ~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 156 (313)
T 1ogq_A 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEEC
Confidence 999999995 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccc
Q 006019 177 DEGQLSSAAKK 187 (664)
Q Consensus 177 ~~n~l~g~~p~ 187 (664)
++|+++|.+|.
T Consensus 157 ~~N~l~~~~p~ 167 (313)
T 1ogq_A 157 DGNRISGAIPD 167 (313)
T ss_dssp CSSCCEEECCG
T ss_pred cCCcccCcCCH
Confidence 99999999986
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=1.5e-23 Score=233.51 Aligned_cols=176 Identities=12% Similarity=0.128 Sum_probs=134.8
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCC---chhHHHHHHHHHHHHhccCCCcccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDW---PKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.||+|+||.||+|.+ .+..+++|+......... .....+.|.+|++++++++||||+++..++...+ ..++||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lVm 418 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD--NKRIMM 418 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--TTEEEE
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--ccEEEE
Confidence 6899999999999965 567888888755332211 0112456899999999999999997666666655 459999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhh--
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMA-- 530 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~-- 530 (664)
||+++|+|.++++. +..|+.|+++||+|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g--IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND--VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT--EECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc--CccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 99999999999863 5689999999999999999 999999999999999 9999999999865321
Q ss_pred --------------hhhcccccccCC--CCCCcCCcchhhHHHHHHHHhCCCCc
Q 006019 531 --------------EMAATSKKLSSA--PSASLESNVYNFGVLLFEMVTGRLPY 568 (664)
Q Consensus 531 --------------~~~~~~pe~~~~--~~~s~ksDVySfGvvl~El~tG~~P~ 568 (664)
+..+.+||+... ..++.++|+||..+-.+|-+.++.+|
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 123345666543 34677889999999999998888777
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.87 E-value=1e-22 Score=237.43 Aligned_cols=158 Identities=24% Similarity=0.327 Sum_probs=102.0
Q ss_pred hccCchHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCccceeEecCCcEEEEEeCCCCcccc---ccccccC-----
Q 006019 24 LCWSLNDEGLALLRLRERVVRDPYGALTSWRSCDTENNPCSWFGVECSDGKVVNLNLKDLCLEGT---LAPEIQS----- 95 (664)
Q Consensus 24 ~~~~~~~~~~all~~k~~~~~~~~~~l~~W~~~~~~~~~C~w~gv~C~~~~v~~l~L~~~~l~g~---ip~~~~~----- 95 (664)
+..+.++|++||++||+++. ||. .+++|+ .+.+||+|.||+|+.++|+.|+|+++++.|. +|+.+.+
T Consensus 6 ~~~~~~~~~~all~~k~~~~-~~~-~l~~W~---~~~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLP-DKN-LLPDWS---SNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCS-CTT-SSTTCC---TTSCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred cccCCHHHHHHHHHHHhhCC-Ccc-cccCCC---CCCCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 34456899999999999997 787 899997 5678999999999999999999999999998 7765554
Q ss_pred ------------------CCCCCEEEccCCcccccCCc--ccCCCCCCCEEEeecCcccccCCccc-cCCcccceeeccc
Q 006019 96 ------------------LTHIKSIILRNNSFSGIIPE--GFGELEELEVLDFGHNNFSGPLPNDL-GINHSLTILLLDN 154 (664)
Q Consensus 96 ------------------l~~L~~l~L~~N~l~g~ip~--~~~~l~~L~~L~l~~N~l~g~ip~~~-~~~~~L~~l~l~~ 154 (664)
+++|++|+|++|.++|.+|. .+++|++|++|+|++|.++|.+|..+ .++++|++|+|++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 45555555555555555554 45555555555555555555555443 4455555555555
Q ss_pred CcccccCCcc---ccCCCCCCEeeCCCCccccccc
Q 006019 155 NDFVGSLSPE---IYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 155 N~~~g~iP~~---~~~l~~L~~l~l~~n~l~g~~p 186 (664)
|+++|.+|.. +.++++|++|++++|+++|.+|
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 195 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVD 195 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCC
Confidence 5555544444 3444444444444444444333
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.86 E-value=9.4e-22 Score=224.19 Aligned_cols=155 Identities=19% Similarity=0.267 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHHhcccCCCC-------CCCCCCCCCCCCCCCcc---ceeEecC-CcEEEEEeCCCCccccccccccCCC
Q 006019 29 NDEGLALLRLRERVVRDPYG-------ALTSWRSCDTENNPCSW---FGVECSD-GKVVNLNLKDLCLEGTLAPEIQSLT 97 (664)
Q Consensus 29 ~~~~~all~~k~~~~~~~~~-------~l~~W~~~~~~~~~C~w---~gv~C~~-~~v~~l~L~~~~l~g~ip~~~~~l~ 97 (664)
..|+.||.+++.++..+... ...+|+ .+.+||.| .||+|+. ++|+.|+|++++++|.+|+++++|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~---~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWN---FNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCC---CSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCC---CCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCc
Confidence 46889999999987643222 234786 56899999 9999975 7999999999999999999999999
Q ss_pred CCCEEEccCC----------------------------------------------------------------------
Q 006019 98 HIKSIILRNN---------------------------------------------------------------------- 107 (664)
Q Consensus 98 ~L~~l~L~~N---------------------------------------------------------------------- 107 (664)
+|+.|+|++|
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 9999999988
Q ss_pred --------cccccCCcccCCCCCCCEEEeecCccccc-----------------CCcccc--CCcccceeecccCccccc
Q 006019 108 --------SFSGIIPEGFGELEELEVLDFGHNNFSGP-----------------LPNDLG--INHSLTILLLDNNDFVGS 160 (664)
Q Consensus 108 --------~l~g~ip~~~~~l~~L~~L~l~~N~l~g~-----------------ip~~~~--~~~~L~~l~l~~N~~~g~ 160 (664)
.++| ||..++++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 4456 999999999999999999999997 999999 999999999999999999
Q ss_pred CCccccCCCCCCEeeCCCCc-ccc-cccc
Q 006019 161 LSPEIYKLQVLSESQVDEGQ-LSS-AAKK 187 (664)
Q Consensus 161 iP~~~~~l~~L~~l~l~~n~-l~g-~~p~ 187 (664)
+|..++++++|++|++++|+ ++| .+|.
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~ 293 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKD 293 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHH
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchH
Confidence 99999999999999999998 999 8886
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=1.5e-21 Score=227.39 Aligned_cols=154 Identities=22% Similarity=0.312 Sum_probs=138.7
Q ss_pred chHHHHHHHHHHHhcccCCCCCCCCCCCCC--CCCCC--Ccc------------ceeEec-CCcEEEEEeCCCCcccccc
Q 006019 28 LNDEGLALLRLRERVVRDPYGALTSWRSCD--TENNP--CSW------------FGVECS-DGKVVNLNLKDLCLEGTLA 90 (664)
Q Consensus 28 ~~~~~~all~~k~~~~~~~~~~l~~W~~~~--~~~~~--C~w------------~gv~C~-~~~v~~l~L~~~~l~g~ip 90 (664)
..+|+.||++||+++. +| +|+... .+.+| |+| .||+|+ .++|+.|+|++++|+|.+|
T Consensus 267 ~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 267 YIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred chHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 3579999999999985 45 796221 12356 999 999998 4899999999999999999
Q ss_pred ccccCCCCCCEEEc-cCCccccc---------------------------------------------------------
Q 006019 91 PEIQSLTHIKSIIL-RNNSFSGI--------------------------------------------------------- 112 (664)
Q Consensus 91 ~~~~~l~~L~~l~L-~~N~l~g~--------------------------------------------------------- 112 (664)
+++++|++|+.|+| ++|.++|.
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 88877666
Q ss_pred -------------------CCcccCCCCCCCEEEeecCcccc-----------------cCCcccc--CCcccceeeccc
Q 006019 113 -------------------IPEGFGELEELEVLDFGHNNFSG-----------------PLPNDLG--INHSLTILLLDN 154 (664)
Q Consensus 113 -------------------ip~~~~~l~~L~~L~l~~N~l~g-----------------~ip~~~~--~~~~L~~l~l~~ 154 (664)
||..|++|++|++|+|++|+|+| .+|..++ ++++|++|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 89999999999999999999999 5999988 999999999999
Q ss_pred CcccccCCccccCCCCCCEeeCCCCc-ccc-cccc
Q 006019 155 NDFVGSLSPEIYKLQVLSESQVDEGQ-LSS-AAKK 187 (664)
Q Consensus 155 N~~~g~iP~~~~~l~~L~~l~l~~n~-l~g-~~p~ 187 (664)
|++.|.+|..++++++|+.|+|++|+ ++| .+|.
T Consensus 501 N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~ 535 (876)
T 4ecn_A 501 CPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKA 535 (876)
T ss_dssp CTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHH
T ss_pred CCCCccChHHHhCCCCCCEEECcCCCCcccccchH
Confidence 99999999999999999999999998 999 8886
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=1.7e-20 Score=191.48 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=108.1
Q ss_pred hcccccCCCeEEEEEEECCCcEEEEEEeeecccCC-------------CchhHHHHHHHHHHHHhccCCCcccceEEEEe
Q 006019 375 SNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKD-------------WPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCE 441 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~-------------~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 441 (664)
.+.||+|+||.||+|+..+|..||+|.+....... |.......|.+|+++|++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 37899999999999999779999999986432110 00023567999999999999 4 66666654
Q ss_pred cCCCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCCceEeccc
Q 006019 442 EEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDL 521 (664)
Q Consensus 442 ~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~~~kl~Df 521 (664)
.. ..++||||+++|+|.+ +.. .....++.+++.||+|||+.+ |+||||||+|||++ ++.+||+||
T Consensus 172 ~~---~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g--iiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 172 WE---GNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG--IVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp EE---TTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEE-TTEEEECCC
T ss_pred cc---ceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC--CEeCCCCHHHEEEE-CCcEEEEEC
Confidence 43 3489999999999988 431 124469999999999999999 99999999999999 999999999
Q ss_pred Cchhhh
Q 006019 522 SFWNEI 527 (664)
Q Consensus 522 Gla~~~ 527 (664)
|+++..
T Consensus 237 G~a~~~ 242 (282)
T 1zar_A 237 PQSVEV 242 (282)
T ss_dssp TTCEET
T ss_pred CCCeEC
Confidence 998755
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.79 E-value=2.1e-20 Score=195.31 Aligned_cols=157 Identities=15% Similarity=0.205 Sum_probs=141.1
Q ss_pred CchHHHHHHHHHHHhcccCCCCCCCCCCC-CCCCCCCCccceeEec----------CCcEEEEEeCCCCccccccccccC
Q 006019 27 SLNDEGLALLRLRERVVRDPYGALTSWRS-CDTENNPCSWFGVECS----------DGKVVNLNLKDLCLEGTLAPEIQS 95 (664)
Q Consensus 27 ~~~~~~~all~~k~~~~~~~~~~l~~W~~-~~~~~~~C~w~gv~C~----------~~~v~~l~L~~~~l~g~ip~~~~~ 95 (664)
+..+|++||++||..+..|+.+.+++|.. .....++|.|.|+.|+ ..+|+.|+|++|+++ .+|+.+++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 46789999999999987778776778831 0135788999999995 269999999999999 89999999
Q ss_pred CCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccCcccccCCccccC--------
Q 006019 96 LTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYK-------- 167 (664)
Q Consensus 96 l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~-------- 167 (664)
+++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|+|++|++.|.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 999999999999999 99999999999999999999999 89999999999999999999999999998875
Q ss_pred -CCCCCEeeCCCCcccccccc
Q 006019 168 -LQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 168 -l~~L~~l~l~~n~l~g~~p~ 187 (664)
+++|++|+|++|+++ .+|.
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~ 200 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPA 200 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCG
T ss_pred cCCCCCEEECcCCCcC-cchH
Confidence 999999999999999 7775
No 259
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=2.8e-18 Score=172.85 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=104.0
Q ss_pred hhcccccCCCeEEEEEEE-CCCcE--EEEEEeeecccCCC-------------------chhHHHHHHHHHHHHhccCCC
Q 006019 374 FSNVIGSSPIGTVYKGTL-SNGVE--IAVASVSVASAKDW-------------------PKNLEVQFRKKIDTLSKVNHK 431 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~-~~~~~--vavk~~~~~~~~~~-------------------~~~~~~~f~~E~~~l~~l~H~ 431 (664)
+.+.||+|+||.||+|.. .+|.. ||||++........ .......+.+|++.|.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 347899999999999997 68888 99998754321100 011234688999999999988
Q ss_pred cc--cceEEEEecCCCceeEEEEEecCC-C----ChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCCeEEeCc
Q 006019 432 NF--VNLIGFCEEEEPFTRMMVFEYAPN-G----TLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYL 503 (664)
Q Consensus 432 ni--v~l~g~~~~~~~~~~~lV~Ey~~~-G----sL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH-~~~~~ivHrDL 503 (664)
++ ...+.+ . ..+|||||+.+ | +|.++... .++.....++.+++.|+.||| +++ |+||||
T Consensus 131 ~i~~p~~~~~--~----~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g--ivHrDl 197 (258)
T 1zth_A 131 GVSVPQPYTY--M----KNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE--LVHADL 197 (258)
T ss_dssp TCCCCCEEEE--E----TTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC--EECSSC
T ss_pred CCCCCeEEEc--C----CCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC--EEeCCC
Confidence 64 344432 2 34899999942 4 55554321 223456789999999999999 898 999999
Q ss_pred CCCCeEecCCCceEecccCchhhh
Q 006019 504 NSSAVHLTEDYAAKLSDLSFWNEI 527 (664)
Q Consensus 504 k~~NILld~~~~~kl~DfGla~~~ 527 (664)
||+|||++. .++|+|||++...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999998754
No 260
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.68 E-value=1.7e-16 Score=156.68 Aligned_cols=128 Identities=24% Similarity=0.296 Sum_probs=115.0
Q ss_pred CCCCCCccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEE
Q 006019 58 TENNPCSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVL 126 (664)
Q Consensus 58 ~~~~~C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L 126 (664)
.+...|+|++|.|+. .+++.|+|++|.+++..|..+.++++|+.|+|++|.|++..+..|..+++|++|
T Consensus 14 ~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp CTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 356789999999973 268899999999999888899999999999999999976555668999999999
Q ss_pred EeecCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 127 DFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 127 ~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
+|++|++++..+..+..+++|+.|+|++|+++ .+|..+.++++|++|+|++|++++..+
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH
Confidence 99999999766666889999999999999999 899999999999999999999996544
No 261
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=2.3e-16 Score=151.28 Aligned_cols=125 Identities=20% Similarity=0.272 Sum_probs=115.0
Q ss_pred CccceeEecC-----------CcEEEEEeCCCCccccccc-cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeec
Q 006019 63 CSWFGVECSD-----------GKVVNLNLKDLCLEGTLAP-EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGH 130 (664)
Q Consensus 63 C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~-~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~ 130 (664)
|.|+.+.|+. .+++.|+|++|.+++..+. .+..+++|+.|+|++|.|++.+|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 7899999973 2789999999999876554 389999999999999999999999999999999999999
Q ss_pred CcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 131 NNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 131 N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++++..|..+..+++|++|+|++|++++.+|..+..+++|++|+|++|.|++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999998888899999999999999999999999999999999999999999988763
No 262
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.62 E-value=6.2e-16 Score=180.10 Aligned_cols=115 Identities=27% Similarity=0.366 Sum_probs=87.7
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCcccc----------
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLG---------- 142 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~---------- 142 (664)
.+++.|+|++|.++|.+|..++.+++|+.|+|++|.++|.+|..++++++|+.|+|++|+++|.+|..+.
T Consensus 490 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~ 569 (768)
T 3rgz_A 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCST
T ss_pred CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhc
Confidence 3677788888888888887788888888888888888888887777777888888777777777775432
Q ss_pred ------------------------------------------------------------CCcccceeecccCcccccCC
Q 006019 143 ------------------------------------------------------------INHSLTILLLDNNDFVGSLS 162 (664)
Q Consensus 143 ------------------------------------------------------------~~~~L~~l~l~~N~~~g~iP 162 (664)
.+++|+.|||++|+++|.||
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip 649 (768)
T 3rgz_A 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649 (768)
T ss_dssp TCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCC
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCC
Confidence 23567777777777777777
Q ss_pred ccccCCCCCCEeeCCCCcccccccc
Q 006019 163 PEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 163 ~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
.++++++.|+.|+|++|+++|.||.
T Consensus 650 ~~l~~l~~L~~L~Ls~N~l~g~ip~ 674 (768)
T 3rgz_A 650 KEIGSMPYLFILNLGHNDISGSIPD 674 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred HHHhccccCCEEeCcCCccCCCCCh
Confidence 7777777777777777777777776
No 263
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.62 E-value=1.9e-15 Score=148.23 Aligned_cols=125 Identities=18% Similarity=0.200 Sum_probs=114.2
Q ss_pred CccceeEecCC-----------cEEEEEeCCCCccccccc-cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeec
Q 006019 63 CSWFGVECSDG-----------KVVNLNLKDLCLEGTLAP-EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGH 130 (664)
Q Consensus 63 C~w~gv~C~~~-----------~v~~l~L~~~~l~g~ip~-~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~ 130 (664)
|.|..+.|++. .++.|+|++|.|++..|. .+..+++|+.|+|++|.+++..|..|..+++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 68999999732 568999999999987664 489999999999999999988888999999999999999
Q ss_pred CcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 131 NNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 131 N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++++..|..+..+++|++|+|++|++++..|..+.++++|++|+|++|++++..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 999987777899999999999999999999999999999999999999999998775
No 264
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=1.8e-15 Score=142.94 Aligned_cols=125 Identities=18% Similarity=0.235 Sum_probs=109.7
Q ss_pred CccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecC
Q 006019 63 CSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHN 131 (664)
Q Consensus 63 C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N 131 (664)
|+|.++.|+. .+++.|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+++|++|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 7899999973 36899999999999766666899999999999999999776777899999999999999
Q ss_pred cccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 132 NFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 132 ~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++++..+..+..+++|++|+|++|++++..+..+.++++|++|+|++|.+++..|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99977666788999999999999999955444568899999999999999998774
No 265
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.61 E-value=2.7e-15 Score=147.11 Aligned_cols=125 Identities=22% Similarity=0.261 Sum_probs=113.1
Q ss_pred CccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecC
Q 006019 63 CSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHN 131 (664)
Q Consensus 63 C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N 131 (664)
|.|..|.|+. .+++.|+|++|++++..+..+..+++|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 6899999973 26899999999999866668999999999999999999999999999999999999999
Q ss_pred cccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 132 NFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 132 ~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+++...+..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 99954444578899999999999999999999999999999999999999987664
No 266
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.60 E-value=4.6e-15 Score=144.02 Aligned_cols=126 Identities=21% Similarity=0.263 Sum_probs=110.3
Q ss_pred CCccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeec
Q 006019 62 PCSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGH 130 (664)
Q Consensus 62 ~C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~ 130 (664)
.|.|.+|.|+. .+++.|+|++|++++..+..+.++++|+.|+|++|.+++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 37899999973 2689999999999976656689999999999999999976666789999999999999
Q ss_pred CcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 131 NNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 131 N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++++..+..+..+++|++|+|++|++++..+..+.++++|++|++++|++++..+.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 999976666688999999999999999977676789999999999999999975553
No 267
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.58 E-value=7.7e-15 Score=146.92 Aligned_cols=113 Identities=21% Similarity=0.233 Sum_probs=97.9
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLD 153 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~ 153 (664)
.++.|+|++|++++..+..+.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 47889999999998777789999999999999999998888888999999999999999997666778889999999999
Q ss_pred cCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 154 NNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 154 ~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
+|++++..|..+.++++|++|+|++|++++..+
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 999996666667889999999999999987655
No 268
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=2.5e-15 Score=157.56 Aligned_cols=139 Identities=6% Similarity=0.040 Sum_probs=96.0
Q ss_pred hhcccccCCCeEEEEEEECCCcEEEEEEeeecccC-----C---Cc-hhHHHH--------HHHHHHHHhccCCCcccce
Q 006019 374 FSNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAK-----D---WP-KNLEVQ--------FRKKIDTLSKVNHKNFVNL 436 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~-----~---~~-~~~~~~--------f~~E~~~l~~l~H~niv~l 436 (664)
+.+.||+|+||.||+|...+|+.||||+++..... . .. ...... ..+|...|.++.+.++.-.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 45789999999999999989999999987542211 0 00 000111 2345566666644433221
Q ss_pred EEEEecCCCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCeEecCCC--
Q 006019 437 IGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDY-- 514 (664)
Q Consensus 437 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NILld~~~-- 514 (664)
.-+... ..+|||||++++.|.++... .....++.+++.++.|||+++ ||||||||.|||+++++
T Consensus 179 ~p~~~~----~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g--IVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 179 EPIAQS----RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG--LIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CEEEEE----TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT--EECSCCSTTSEEEEEEECS
T ss_pred eeeecc----CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC--CcCCCCCHHHEEEeCCCCc
Confidence 112111 22799999999888765431 123467899999999999998 99999999999999877
Q ss_pred --------ceEecccCchhh
Q 006019 515 --------AAKLSDLSFWNE 526 (664)
Q Consensus 515 --------~~kl~DfGla~~ 526 (664)
.+.|+||+-+..
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEE
T ss_pred ccccccccceEEEEeCCccc
Confidence 389999986543
No 269
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.56 E-value=2.9e-15 Score=155.24 Aligned_cols=115 Identities=22% Similarity=0.379 Sum_probs=111.1
Q ss_pred CcEEEEEeCC-CCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKD-LCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~-~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++ |++.|.+|..++++++|++|+|++|.++|.+|..++++++|++|+|++|+++|.+|..++.+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 4688999995 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccccCCccccCCC-CCCEeeCCCCcccccccc
Q 006019 152 LDNNDFVGSLSPEIYKLQ-VLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP~~~~~l~-~L~~l~l~~n~l~g~~p~ 187 (664)
|++|+++|.+|..+++++ +|++|++++|+++|.+|.
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~ 192 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPP 192 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCG
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCCh
Confidence 999999999999999998 999999999999999987
No 270
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.55 E-value=1.8e-14 Score=138.05 Aligned_cols=122 Identities=24% Similarity=0.283 Sum_probs=106.8
Q ss_pred CccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecC
Q 006019 63 CSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHN 131 (664)
Q Consensus 63 C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N 131 (664)
|.|..+.|++ ..++.|+|++|.|+ .+|..+.++++|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 6788899963 26789999999998 78888999999999999999999888888999999999999999
Q ss_pred cccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccc
Q 006019 132 NFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAA 185 (664)
Q Consensus 132 ~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~ 185 (664)
++++..|..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+....
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999877778999999999999999999655556889999999999999998643
No 271
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.52 E-value=2.9e-14 Score=139.71 Aligned_cols=114 Identities=15% Similarity=0.161 Sum_probs=108.1
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..+..+.++++|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 58999999999999877778999999999999999999888888999999999999999999988999999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|++++..|..+..+++|++|+|++|.|++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999999999999999999999999998765
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.51 E-value=5.5e-14 Score=142.31 Aligned_cols=121 Identities=21% Similarity=0.248 Sum_probs=55.6
Q ss_pred CCCCccceeEecC-CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCC
Q 006019 60 NNPCSWFGVECSD-GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLP 138 (664)
Q Consensus 60 ~~~C~w~gv~C~~-~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip 138 (664)
.+.|.|.|+.|+. +.++.+++++++|+ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|+++...+
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 3567887777752 23444555555444 2443332 344444444444443333344444444444444444442222
Q ss_pred ccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 139 NDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 139 ~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
..+..+++|++|+|++|++++..+..+.++++|++|+|++|++++
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 123 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS 123 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCC
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCe
Confidence 223444444444444444443333333444444444444444444
No 273
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.51 E-value=8e-15 Score=168.94 Aligned_cols=154 Identities=13% Similarity=0.043 Sum_probs=64.1
Q ss_pred chHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCccceeEecCCcEEEEEeCCCCccc--------------------
Q 006019 28 LNDEGLALLRLRERVVRDPYGALTSWRSCDTENNPCSWFGVECSDGKVVNLNLKDLCLEG-------------------- 87 (664)
Q Consensus 28 ~~~~~~all~~k~~~~~~~~~~l~~W~~~~~~~~~C~w~gv~C~~~~v~~l~L~~~~l~g-------------------- 87 (664)
.+.++++|+++..+........-.+|. ......+.|.++.++.++++.|+|.+|++..
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPT--GDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCc--CCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 356778899888766433333334564 2334456787777665444444443322211
Q ss_pred -------cccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccCccccc
Q 006019 88 -------TLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGS 160 (664)
Q Consensus 88 -------~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~ 160 (664)
..|..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .||..++++++|++|+|++|+|+ .
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ 284 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-S 284 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-S
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-c
Confidence 11233445555555666655555 45555555555556666655555 55555555555556666555555 5
Q ss_pred CCccccCCCCCCEeeCCCCcccccccc
Q 006019 161 LSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 161 iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
||..|++|++|++|+|++|.|+ .||.
T Consensus 285 lp~~~~~l~~L~~L~L~~N~l~-~lp~ 310 (727)
T 4b8c_D 285 LPAELGSCFQLKYFYFFDNMVT-TLPW 310 (727)
T ss_dssp CCSSGGGGTTCSEEECCSSCCC-CCCS
T ss_pred cChhhcCCCCCCEEECCCCCCC-ccCh
Confidence 5555555555555555555554 4443
No 274
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.50 E-value=2.6e-14 Score=149.01 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=102.7
Q ss_pred CcEEEEEeCCCCccccccccccC---------CCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccC
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQS---------LTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGI 143 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~---------l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~ 143 (664)
.+++.|+|++|++.|.+|..++. +++|+.|+|++|.++ .+|..++++++|++|+|++|++++ +|..++.
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~ 227 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHH 227 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhcc
Confidence 47899999999999999987765 999999999999998 889999999999999999999995 7888999
Q ss_pred CcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 144 NHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 144 ~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+++|++|+|++|++.+.+|..++++++|++|++++|++.+.+|.
T Consensus 228 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~ 271 (328)
T 4fcg_A 228 LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPL 271 (328)
T ss_dssp CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCT
T ss_pred CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcch
Confidence 99999999999999999999999999999999999999999986
No 275
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.49 E-value=2.9e-14 Score=130.48 Aligned_cols=112 Identities=21% Similarity=0.214 Sum_probs=103.6
Q ss_pred CcEEEEEeCCCCcc-ccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLE-GTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~-g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.+++.|++++|+++ |.+|..+..+++|+.|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47899999999999 89999999999999999999999976 7899999999999999999998998888899999999
Q ss_pred cccCcccc-cCCccccCCCCCCEeeCCCCccccccc
Q 006019 152 LDNNDFVG-SLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 152 l~~N~~~g-~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
+++|.+++ ..|..+..+++|++|++++|++++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999997 356889999999999999999997654
No 276
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.47 E-value=5.9e-14 Score=153.06 Aligned_cols=129 Identities=16% Similarity=0.217 Sum_probs=115.1
Q ss_pred CCCCCccce--eEecC----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCC-cccCCCCCCCE
Q 006019 59 ENNPCSWFG--VECSD----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIP-EGFGELEELEV 125 (664)
Q Consensus 59 ~~~~C~w~g--v~C~~----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip-~~~~~l~~L~~ 125 (664)
....|.|.+ |.|+. .+++.|+|++|.+++..|..+.++++|++|+|++|.+.+.+| ..|.++++|++
T Consensus 4 ~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~ 83 (455)
T 3v47_A 4 GTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLII 83 (455)
T ss_dssp ---CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCE
T ss_pred ccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCE
Confidence 445677766 88874 368999999999999889999999999999999999998875 56999999999
Q ss_pred EEeecCcccccCCccccCCcccceeecccCcccccCCcc--ccCCCCCCEeeCCCCcccccccc
Q 006019 126 LDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPE--IYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 126 L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~--~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|+|++|++++..|..++++++|++|+|++|++++.+|.. +.++++|++|+|++|++++..|.
T Consensus 84 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 147 (455)
T 3v47_A 84 LKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA 147 (455)
T ss_dssp EECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC
T ss_pred EeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc
Confidence 999999999988999999999999999999999988776 99999999999999999998775
No 277
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.47 E-value=1.7e-13 Score=131.21 Aligned_cols=109 Identities=20% Similarity=0.295 Sum_probs=100.2
Q ss_pred EEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCc-ccCCCCCCCEEEeecCcccccCCccccCCcccceeeccc
Q 006019 76 VNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPE-GFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDN 154 (664)
Q Consensus 76 ~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~-~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~ 154 (664)
..+++++++|+ .+|..+.. +|+.|+|++|.+++..|. .++.+++|++|+|++|++++..|..+..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67899999995 78887654 999999999999977665 489999999999999999999899999999999999999
Q ss_pred CcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 155 NDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 155 N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++++..|..+.++++|++|+|++|++++.+|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 120 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG 120 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTT
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHH
Confidence 999999998899999999999999999998886
No 278
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.47 E-value=5.6e-14 Score=157.08 Aligned_cols=125 Identities=21% Similarity=0.275 Sum_probs=114.5
Q ss_pred CCccceeEecC-------------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEe
Q 006019 62 PCSWFGVECSD-------------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDF 128 (664)
Q Consensus 62 ~C~w~gv~C~~-------------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l 128 (664)
.|.|.|+ |+. .+++.|+|++|.+++..|..+.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999998 862 26899999999999988889999999999999999999988899999999999999
Q ss_pred ecCcccccCCccccCCcccceeecccCcccc-cCCccccCCCCCCEeeCCCCcccccccc
Q 006019 129 GHNNFSGPLPNDLGINHSLTILLLDNNDFVG-SLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 129 ~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g-~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..|..++.+++|++|+|++|.+++ .+|..++++++|++|++++|++.+.+|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~ 141 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRR 141 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCH
Confidence 9999998777779999999999999999997 5788999999999999999998777774
No 279
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.46 E-value=2.3e-13 Score=136.05 Aligned_cols=115 Identities=23% Similarity=0.219 Sum_probs=104.3
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..+..+.++++|+.|+|++|.+++..|..|..+++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 58999999999999987778999999999999999999877788999999999999999999766666789999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..|..+.++++|++|+|++|++++..+.
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 99999977676899999999999999999976663
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.44 E-value=2.2e-13 Score=154.61 Aligned_cols=114 Identities=18% Similarity=0.103 Sum_probs=103.2
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLD 153 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~ 153 (664)
.++.|+|++|.|++..+.+|.++++|++|+|++|.|++..|..|.+|++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 68999999999997666789999999999999999998778889999999999999999997655678999999999999
Q ss_pred cCcccccCCccccCCCCCCEeeCCCCcccc-cccc
Q 006019 154 NNDFVGSLSPEIYKLQVLSESQVDEGQLSS-AAKK 187 (664)
Q Consensus 154 ~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g-~~p~ 187 (664)
+|++++..+..++++++|++|+|++|++++ .+|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~ 167 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 167 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCch
Confidence 999997767779999999999999999986 3554
No 281
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.44 E-value=1.7e-13 Score=128.06 Aligned_cols=112 Identities=18% Similarity=0.187 Sum_probs=102.4
Q ss_pred CcEEEEEeCCCCcc-ccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLE-GTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~-g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57999999999998 89999999999999999999999976 7899999999999999999998998888899999999
Q ss_pred cccCccccc-CCccccCCCCCCEeeCCCCccccccc
Q 006019 152 LDNNDFVGS-LSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 152 l~~N~~~g~-iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
|++|++++. .+..+.++++|++|++++|.+++..+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 999999863 33789999999999999999997654
No 282
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=3.9e-13 Score=126.00 Aligned_cols=108 Identities=19% Similarity=0.223 Sum_probs=94.0
Q ss_pred EEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccCc
Q 006019 77 NLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNND 156 (664)
Q Consensus 77 ~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~ 156 (664)
.+++++|+|+. +|..+. ++|+.|+|++|.|++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 44556677764 777663 899999999999999889999999999999999999997666667899999999999999
Q ss_pred ccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 157 FVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 157 ~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++..|..+.++++|++|+|++|.|++..+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9976666799999999999999999987664
No 283
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.43 E-value=3.2e-13 Score=132.20 Aligned_cols=112 Identities=16% Similarity=0.205 Sum_probs=104.0
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..|..+.++++|+.|+|++|.|++..+..|..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 58999999999999988999999999999999999999655556799999999999999999988999999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
++|++++..+..+..+++|++|+|++|.|...
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999988887899999999999999999864
No 284
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.42 E-value=2.1e-13 Score=152.35 Aligned_cols=109 Identities=22% Similarity=0.221 Sum_probs=103.2
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLD 153 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~ 153 (664)
.++.|+|++|.|++ +|. +++|++|+.|+|++|.|+ .+|..+++|++|+.|+|++|++++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 57889999999997 776 999999999999999999 899999999999999999999997 78 89999999999999
Q ss_pred cCcccccC-CccccCCCCCCEeeCCCCcccccccc
Q 006019 154 NNDFVGSL-SPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 154 ~N~~~g~i-P~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+|++++.+ |..++++++|+.|+|++|+|++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999987 99999999999999999999998775
No 285
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=5.3e-13 Score=125.55 Aligned_cols=108 Identities=19% Similarity=0.245 Sum_probs=95.1
Q ss_pred EEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccC
Q 006019 76 VNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNN 155 (664)
Q Consensus 76 ~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N 155 (664)
+.+++++|+|+ .+|..+. ++|+.|+|++|.|++..|..|+++++|++|+|++|+|++..+..+..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56888899885 7888775 89999999999999998999999999999999999999754445689999999999999
Q ss_pred cccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 156 DFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 156 ~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++++..+..+.++++|++|+|++|.|....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9996555569999999999999999997654
No 286
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.42 E-value=7.3e-13 Score=134.13 Aligned_cols=112 Identities=23% Similarity=0.232 Sum_probs=70.8
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++ + +.+..+++|++|+|++|.+++..|..++++++|++|+|++|++++..|..++.+++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 356666666666665 2 35666666666666666666555555666666666666666666555555666666666666
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|++++..|..+.++++|++|++++|++++..+
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 6666665555555666666666666666665444
No 287
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.41 E-value=6.3e-13 Score=128.80 Aligned_cols=115 Identities=16% Similarity=0.126 Sum_probs=102.9
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 47999999999999655556799999999999999999776777899999999999999999766666899999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..+..+.++++|++|++++|.+.+..|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 99999976666689999999999999999998775
No 288
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.41 E-value=6.1e-13 Score=134.72 Aligned_cols=115 Identities=22% Similarity=0.228 Sum_probs=103.5
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..+..+.++++|+.|+|++|.+++..|..++.+++|++|+|++|++++..|..++.+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 57999999999999877767899999999999999999877878899999999999999999776667889999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..|..+.++++|++|++++|++++..|.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 199 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDG 199 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHH
Confidence 99999977777789999999999999999987664
No 289
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.41 E-value=1e-13 Score=157.84 Aligned_cols=125 Identities=14% Similarity=0.179 Sum_probs=115.1
Q ss_pred CCccceeEec----CCcEEEEEeCCCCcccc-----------------cccccc--CCCCCCEEEccCCcccccCCcccC
Q 006019 62 PCSWFGVECS----DGKVVNLNLKDLCLEGT-----------------LAPEIQ--SLTHIKSIILRNNSFSGIIPEGFG 118 (664)
Q Consensus 62 ~C~w~gv~C~----~~~v~~l~L~~~~l~g~-----------------ip~~~~--~l~~L~~l~L~~N~l~g~ip~~~~ 118 (664)
.+..+|+ .. -.+++.|+|++|.|+|. +|..++ ++++|++|+|++|.+.|.+|..++
T Consensus 192 ~n~l~~i-p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITFV-SKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEEE-CGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCccC-CHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 3466673 32 25899999999999997 999999 999999999999999999999999
Q ss_pred CCCCCCEEEeecCc-ccc-cCCccccCC------cccceeecccCcccccCCc--cccCCCCCCEeeCCCCccccccccc
Q 006019 119 ELEELEVLDFGHNN-FSG-PLPNDLGIN------HSLTILLLDNNDFVGSLSP--EIYKLQVLSESQVDEGQLSSAAKKE 188 (664)
Q Consensus 119 ~l~~L~~L~l~~N~-l~g-~ip~~~~~~------~~L~~l~l~~N~~~g~iP~--~~~~l~~L~~l~l~~n~l~g~~p~~ 188 (664)
++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|++|++++|+++|.+|..
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~ 349 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAF 349 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCC
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhh
Confidence 99999999999999 999 999999887 99999999999999 9999 9999999999999999999999953
No 290
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.41 E-value=5.9e-13 Score=150.67 Aligned_cols=128 Identities=19% Similarity=0.155 Sum_probs=112.7
Q ss_pred CCCCccc----eeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCC
Q 006019 60 NNPCSWF----GVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELE 124 (664)
Q Consensus 60 ~~~C~w~----gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~ 124 (664)
.+||.|. .|.|+. .+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|+++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 3567663 577852 3789999999999988888899999999999999999988898999999999
Q ss_pred EEEeecCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccc-cccc
Q 006019 125 VLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS-AAKK 187 (664)
Q Consensus 125 ~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g-~~p~ 187 (664)
+|+|++|++++..|..++++++|++|+|++|++++..|..++++++|++|++++|++++ .+|.
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~ 147 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPA 147 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechH
Confidence 99999999998889999999999999999999998877889999999999999999986 6676
No 291
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.40 E-value=7.9e-13 Score=130.28 Aligned_cols=114 Identities=20% Similarity=0.191 Sum_probs=102.9
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.|++..+..+..+++|+.|+|++|.|++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 58999999999997544455799999999999999999877777899999999999999999 89999999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..+..+..+++|+.|+|++|.+++..+.
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcch
Confidence 99999976667789999999999999999987663
No 292
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.40 E-value=1.1e-12 Score=132.99 Aligned_cols=114 Identities=18% Similarity=0.103 Sum_probs=101.2
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLD 153 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~ 153 (664)
+++.|+|++|++++..+..+.++++|+.|+|++|.+++..+..+.++++|++|+|++|++++..|..+..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 58899999999997666689999999999999999998777789999999999999999998877889999999999999
Q ss_pred cCcccccCCccccCCCCCCEeeCCCCcccc-cccc
Q 006019 154 NNDFVGSLSPEIYKLQVLSESQVDEGQLSS-AAKK 187 (664)
Q Consensus 154 ~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g-~~p~ 187 (664)
+|++++..+..+.++++|++|++++|++++ .+|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~ 143 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCch
Confidence 999998777789999999999999999987 3564
No 293
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.39 E-value=7.4e-13 Score=139.94 Aligned_cols=122 Identities=24% Similarity=0.239 Sum_probs=110.4
Q ss_pred CccceeEecC-----------CcEEEEEeCCCCcccccccccc-CCCCCCEEEccCCcccccCCcccCCCCCCCEEEeec
Q 006019 63 CSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQ-SLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGH 130 (664)
Q Consensus 63 C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~-~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~ 130 (664)
|.|.-+.|.. ..++.|+|++|.|++..+..+. ++++|+.|+|++|.|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 6788899963 2478999999999987666676 999999999999999988888899999999999999
Q ss_pred CcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCccccc
Q 006019 131 NNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 131 N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
|++++..+..+..+++|+.|+|++|++++..|..+.++++|+.|+|++|++++.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l 151 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRF 151 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCee
Confidence 999987777799999999999999999988899999999999999999999974
No 294
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.38 E-value=1.3e-12 Score=125.00 Aligned_cols=107 Identities=17% Similarity=0.262 Sum_probs=97.2
Q ss_pred EEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccC
Q 006019 76 VNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNN 155 (664)
Q Consensus 76 ~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N 155 (664)
..+++++++++ .+|..+. ++|+.|+|++|.|+ .+|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46889999988 6887654 68999999999998 78999999999999999999999877788999999999999999
Q ss_pred cccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 156 DFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 156 ~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++++..|..+.++++|++|+|++|++++..+
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~ 119 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPE 119 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeCh
Confidence 9998888889999999999999999996544
No 295
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=1e-12 Score=138.01 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=95.1
Q ss_pred CccceeEecCCcEEEEEeCCC-CccccccccccCCCCCCEEEccC-CcccccCCcccCCCCCCCEEEeecCcccccCCcc
Q 006019 63 CSWFGVECSDGKVVNLNLKDL-CLEGTLAPEIQSLTHIKSIILRN-NSFSGIIPEGFGELEELEVLDFGHNNFSGPLPND 140 (664)
Q Consensus 63 C~w~gv~C~~~~v~~l~L~~~-~l~g~ip~~~~~l~~L~~l~L~~-N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~ 140 (664)
|.|..|.|+ ++ +|++ ||. |..+++|+.|+|++ |.|++..|..|++|++|+.|+|++|+|+|..|..
T Consensus 8 C~~~~v~~~----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 75 (347)
T 2ifg_A 8 HGSSGLRCT----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75 (347)
T ss_dssp SSSSCEECC----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTG
T ss_pred ccCCEEEcC----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHH
Confidence 888888885 34 6764 888 99999999999996 9999888889999999999999999999988889
Q ss_pred ccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCccccc
Q 006019 141 LGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 141 ~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
|+++++|+.|+|++|+|++ +|+.+.....|+.|+|++|.|...
T Consensus 76 ~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 76 FHFTPRLSRLNLSFNALES-LSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp GGSCSCCCEEECCSSCCSC-CCSTTTCSCCCCEEECCSSCCCCC
T ss_pred hcCCcCCCEEeCCCCccce-eCHHHcccCCceEEEeeCCCccCC
Confidence 9999999999999999995 555544444499999999999864
No 296
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.37 E-value=1.4e-12 Score=147.34 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=99.1
Q ss_pred CCCCCCCCCCCCCCCc----cceeEecC------------------CcEEEEEeCCCCccccccccccCCCCCCEEEccC
Q 006019 49 ALTSWRSCDTENNPCS----WFGVECSD------------------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRN 106 (664)
Q Consensus 49 ~l~~W~~~~~~~~~C~----w~gv~C~~------------------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~ 106 (664)
.+.+|. .+.+||. |.++.|+. .++..++++++.++...+..+.++++|+.|+|++
T Consensus 8 ~l~~~~---~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~ 84 (597)
T 3oja_B 8 NVKPRQ---PEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLND 84 (597)
T ss_dssp ---CCC---SEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTT
T ss_pred cccCCC---CCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCC
Confidence 456775 4556663 76666541 2457778888877653333467788888888888
Q ss_pred CcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 107 NSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 107 N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
|.+++..|..|+.+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..++++++|++|+|++|++++..|
T Consensus 85 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 164 (597)
T 3oja_B 85 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIED 164 (597)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCCh
Confidence 88888777788888888888888888888777777888888888888888884434445788888888888888887766
Q ss_pred c
Q 006019 187 K 187 (664)
Q Consensus 187 ~ 187 (664)
.
T Consensus 165 ~ 165 (597)
T 3oja_B 165 D 165 (597)
T ss_dssp T
T ss_pred h
Confidence 4
No 297
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.35 E-value=1e-12 Score=138.30 Aligned_cols=125 Identities=23% Similarity=0.323 Sum_probs=105.0
Q ss_pred CCCCCccceeEecC-------------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCE
Q 006019 59 ENNPCSWFGVECSD-------------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEV 125 (664)
Q Consensus 59 ~~~~C~w~gv~C~~-------------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~ 125 (664)
...+|.|.|+ |+. .+++.|+|++|++++..+..+.++++|+.|+|++|.+++..|..|.++++|++
T Consensus 26 ~~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 26 ASLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp -CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 3556899987 651 26899999999999755558999999999999999999888888999999999
Q ss_pred EEeecCcccccCCcc-ccCCcccceeecccCcccccCCc--cccCCCCCCEeeCCCCccccccc
Q 006019 126 LDFGHNNFSGPLPND-LGINHSLTILLLDNNDFVGSLSP--EIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 126 L~l~~N~l~g~ip~~-~~~~~~L~~l~l~~N~~~g~iP~--~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
|+|++|++++ +|.. ++.+++|++|+|++|+++ .+|. .+.++++|++|++++|+..+.++
T Consensus 105 L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 105 LDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp EECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred EECCCCcCCc-CCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccC
Confidence 9999999996 5554 889999999999999998 5665 78899999999999996444443
No 298
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.35 E-value=2.7e-12 Score=140.80 Aligned_cols=124 Identities=21% Similarity=0.187 Sum_probs=112.6
Q ss_pred ccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCc
Q 006019 64 SWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNN 132 (664)
Q Consensus 64 ~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~ 132 (664)
.|..|.|.. .+++.|+|++|++++..|..+.++++|+.|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 377899963 267899999999999888899999999999999999999999999999999999999999
Q ss_pred ccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 133 FSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 133 l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+++..+..+.++++|++|+|++|++++..|..+.++++|++|++++|++++..|.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh
Confidence 9965555688999999999999999999999999999999999999999987664
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.34 E-value=3.4e-12 Score=130.02 Aligned_cols=114 Identities=18% Similarity=0.149 Sum_probs=103.8
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCc-ccccCCccccCCcccceeec
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNN-FSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~~~~L~~l~l 152 (664)
+++.|+|++|.+++..+..+.++++|+.|+|++|.+++..|..|..+++|++|+|++|. ++...|..+..+++|++|+|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 68999999999998776789999999999999999998889999999999999999998 77655888999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..|..+.++++|++|++++|++++..+.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 147 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 147 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHh
Confidence 99999988888899999999999999999875553
No 300
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.34 E-value=1.9e-12 Score=141.03 Aligned_cols=114 Identities=20% Similarity=0.183 Sum_probs=104.2
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++.+|..+..+++|+.|+|++|.+++..|..|+++++|++|+|++|++++..|..++.+++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 47899999999999988888999999999999999999888989999999999999999999888888899999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|++++..|..+.++++|++|+|++|++++..+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 388 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPD 388 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCH
Confidence 9999998889999999999999999999997544
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.34 E-value=2.5e-12 Score=132.46 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=92.3
Q ss_pred CcEEEEEeCCCCcccccc-ccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccc-cCCccccCCccccee
Q 006019 73 GKVVNLNLKDLCLEGTLA-PEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSG-PLPNDLGINHSLTIL 150 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip-~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g-~ip~~~~~~~~L~~l 150 (664)
.+++.|+|++|.+++..+ ..+..+++|+.|+|++|.+.+..|..+..+++|++|+|++|.+++ .+|..+..+++|+.|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 467888888888876544 467888888888888888888888888888888888888888887 577788888888888
Q ss_pred ecccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 151 LLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 151 ~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
+|++|++++..|..+.++++|++|+|++|++++..+
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh
Confidence 888888888778888888888888888888876544
No 302
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.34 E-value=1.3e-12 Score=143.67 Aligned_cols=30 Identities=7% Similarity=-0.043 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhccCCCcccceEEEEecCC
Q 006019 415 EVQFRKKIDTLSKVNHKNFVNLIGFCEEEE 444 (664)
Q Consensus 415 ~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 444 (664)
.++|..|++.+++++|+|+|+++|||....
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 467999999999999999999999997654
No 303
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.34 E-value=3.6e-12 Score=130.28 Aligned_cols=108 Identities=20% Similarity=0.197 Sum_probs=70.4
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++ ++.. +.+++|+.|+|++|.++ .+|..+..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 55 ~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 466777777777664 3322 66667777777777765 56666666677777777777776555555666677777777
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
++|++++..|..+.++++|+.|+|++|++++
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 7777765444445666677777777776664
No 304
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.33 E-value=5.4e-13 Score=155.39 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=112.2
Q ss_pred CccceeEec---CCcEEEEEeCCCCccc-----------------ccccccc--CCCCCCEEEccCCcccccCCcccCCC
Q 006019 63 CSWFGVECS---DGKVVNLNLKDLCLEG-----------------TLAPEIQ--SLTHIKSIILRNNSFSGIIPEGFGEL 120 (664)
Q Consensus 63 C~w~gv~C~---~~~v~~l~L~~~~l~g-----------------~ip~~~~--~l~~L~~l~L~~N~l~g~ip~~~~~l 120 (664)
|...|+--. -.+++.|+|++|.|+| .+|..++ +|++|+.|+|++|.+.|.+|..|++|
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 456664221 2589999999999999 5999988 99999999999999999999999999
Q ss_pred CCCCEEEeecCc-ccc-cCCccccCCc-------ccceeecccCcccccCCc--cccCCCCCCEeeCCCCccccccccc
Q 006019 121 EELEVLDFGHNN-FSG-PLPNDLGINH-------SLTILLLDNNDFVGSLSP--EIYKLQVLSESQVDEGQLSSAAKKE 188 (664)
Q Consensus 121 ~~L~~L~l~~N~-l~g-~ip~~~~~~~-------~L~~l~l~~N~~~g~iP~--~~~~l~~L~~l~l~~n~l~g~~p~~ 188 (664)
++|+.|+|++|+ ++| .+|..++.++ +|+.|+|++|+++ .||. .++++++|+.|+|++|+++ .+|..
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~ 591 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAF 591 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCC
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhh
Confidence 999999999998 999 9999888776 9999999999999 9999 9999999999999999999 88853
No 305
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.32 E-value=3.7e-12 Score=129.80 Aligned_cols=115 Identities=17% Similarity=0.201 Sum_probs=97.7
Q ss_pred CcEEEEEeCCCC-ccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLC-LEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~-l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|. +....|..+..+++|+.|+|++|.+++..|..+.++++|++|+|++|++++..+..++.+++|++|+
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 478899999997 6655577788999999999999999988888888999999999999999876666688899999999
Q ss_pred cccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 152 LDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++|++++..+..+.++++|++|++++|++++..|.
T Consensus 160 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 195 (285)
T 1ozn_A 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 195 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CCCCcccccCHHHhcCccccCEEECCCCcccccCHh
Confidence 999999866666788899999999999999887665
No 306
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.32 E-value=1.7e-12 Score=144.49 Aligned_cols=118 Identities=27% Similarity=0.357 Sum_probs=102.0
Q ss_pred CCCCCCCCCCCCC-----cccee-EecCCcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCC
Q 006019 51 TSWRSCDTENNPC-----SWFGV-ECSDGKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELE 124 (664)
Q Consensus 51 ~~W~~~~~~~~~C-----~w~gv-~C~~~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~ 124 (664)
.+|. .+.++| .|.|+ .|..++++.|+|++|+|++ +|..+. ++|+.|+|++|.|+ .|| ..+++|+
T Consensus 34 ~~W~---~~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 34 DKWE---KQALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHH---TTCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHh---ccCCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCC
Confidence 3564 345678 79999 7987899999999999997 888774 89999999999998 788 4578999
Q ss_pred EEEeecCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 125 VLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 125 ~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+|+|++|+|++ +|. +.. +|+.|+|++|++++ ||. .+++|+.|+|++|++++ +|.
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~ 157 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE 157 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC
Confidence 99999999998 888 655 89999999999998 887 68999999999999997 665
No 307
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.32 E-value=7.5e-12 Score=126.49 Aligned_cols=115 Identities=22% Similarity=0.223 Sum_probs=94.7
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.++...+..+.++++|+.|+|++|.+++..+..+..+++|++|+|++|++++..|..+..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 47889999999988543344688999999999999998766677888999999999999999877777888999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..+..+.++++|++|+|++|++++..+.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 99999865555688899999999999998875543
No 308
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.31 E-value=4.4e-12 Score=128.58 Aligned_cols=115 Identities=19% Similarity=0.199 Sum_probs=106.0
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..+..+.++++|+.|+|++|.+++..|..+.++++|++|++++|++++..+..++.+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 57999999999999777778999999999999999999988899999999999999999999877768999999999999
Q ss_pred ccCcccc-cCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVG-SLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g-~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++ .+|..+.++++|++|++++|++++..+.
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 9999987 5899999999999999999999986553
No 309
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.31 E-value=2.4e-12 Score=151.42 Aligned_cols=124 Identities=19% Similarity=0.163 Sum_probs=86.2
Q ss_pred CccceeEecCCcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccC-CcccCCCCCCCEEEeecCcccccCCccc
Q 006019 63 CSWFGVECSDGKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGII-PEGFGELEELEVLDFGHNNFSGPLPNDL 141 (664)
Q Consensus 63 C~w~gv~C~~~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~i-p~~~~~l~~L~~L~l~~N~l~g~ip~~~ 141 (664)
|+|+.|-+-..+++.|+|++|.+++..|..+.++++|++|+|++|.+.+.| |..|++|++|++|+|++|++++..|..+
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 345555553356777777777777766667777777777777777666666 5567777777777777777776667777
Q ss_pred cCCcccceeecccCcccccCCcc--ccCCCCCCEeeCCCCccccccc
Q 006019 142 GINHSLTILLLDNNDFVGSLSPE--IYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 142 ~~~~~L~~l~l~~N~~~g~iP~~--~~~l~~L~~l~l~~n~l~g~~p 186 (664)
+++++|++|+|++|++++.+|.. +.++++|++|+|++|++++..|
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~ 140 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYL 140 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCC
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCccccccc
Confidence 77777777777777777766655 6677777777777777766544
No 310
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.31 E-value=4.3e-12 Score=121.86 Aligned_cols=111 Identities=16% Similarity=0.164 Sum_probs=89.1
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|+++ .+| .+..+++|+.|+|++|.+. .++.+..+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 36788888888887 566 6888888888888888554 3457888888888888888888877888888888888888
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..|..+.++++|++|++++|++.+.+|.
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~ 154 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGG
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHh
Confidence 88888888888888888888888888885555554
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.31 E-value=8.8e-12 Score=135.85 Aligned_cols=123 Identities=20% Similarity=0.188 Sum_probs=110.0
Q ss_pred cceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcc
Q 006019 65 WFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNF 133 (664)
Q Consensus 65 w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l 133 (664)
|..|.|.+ .+++.|+|++|++++..|..+.++++|+.|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 67888963 3689999999999998888999999999999999999998889999999999999999999
Q ss_pred cccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 134 SGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 134 ~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++..+..+..+++|++|+|++|++++..+..+.++++|++|++++|+..+.+|.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 189 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE 189 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh
Confidence 976666789999999999999999976666888999999999999777777765
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.30 E-value=8.8e-12 Score=135.33 Aligned_cols=123 Identities=20% Similarity=0.176 Sum_probs=109.7
Q ss_pred cceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcc
Q 006019 65 WFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNF 133 (664)
Q Consensus 65 w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l 133 (664)
|..|.|.. ..++.|+|++|++++..+..+.++++|+.|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 67899963 3678999999999988888999999999999999999988888999999999999999999
Q ss_pred cccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 134 SGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 134 ~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++..+..+..+++|++|+|++|.+++..+..+.++++|++|+|++|+..+.++.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~ 178 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISE 178 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCc
Confidence 966556799999999999999999977777899999999999999777777765
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.30 E-value=5.2e-12 Score=142.88 Aligned_cols=125 Identities=14% Similarity=0.060 Sum_probs=113.3
Q ss_pred cceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcc
Q 006019 65 WFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNF 133 (664)
Q Consensus 65 w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l 133 (664)
+.-|.|.. ..++.|+|++|.+++..|..++++++|++|+|++|.+.+..|..|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 44577852 3689999999999988888999999999999999999999999999999999999999999
Q ss_pred cccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccc-cccccc
Q 006019 134 SGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS-AAKKEQ 189 (664)
Q Consensus 134 ~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g-~~p~~~ 189 (664)
++..|..++.+++|++|+|++|++++..|..++++++|++|++++|++++ .+|...
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 150 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF 150 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTC
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCccccc
Confidence 99999999999999999999999998778889999999999999999998 456543
No 314
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.30 E-value=5e-12 Score=130.18 Aligned_cols=115 Identities=18% Similarity=0.282 Sum_probs=107.0
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccc-cCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSG-IIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g-~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|.+.+..+..+..+++|+.|+|++|.+.+ .+|..+..+++|++|+|++|++++..|..+..+++|+.|+
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 478999999999999888889999999999999999998 6899999999999999999999998888999999999999
Q ss_pred cccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 152 LDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++|++++..+..+..+++|++|++++|++++.+|.
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHH
Confidence 999999987777899999999999999999998875
No 315
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.30 E-value=4.9e-12 Score=125.34 Aligned_cols=112 Identities=14% Similarity=0.157 Sum_probs=98.8
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCc-ccccCCcccCCCCCCCEEEeec-CcccccCCccccCCccccee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNS-FSGIIPEGFGELEELEVLDFGH-NNFSGPLPNDLGINHSLTIL 150 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~-l~g~ip~~~~~l~~L~~L~l~~-N~l~g~ip~~~~~~~~L~~l 150 (664)
..++.|+|++|++++..+..+.++++|+.|+|++|. +++..+..|.++++|++|+|++ |++++..|..+..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999997666689999999999999997 8766666899999999999999 99997666788999999999
Q ss_pred ecccCcccccCCccccCCCCCC---EeeCCCC-ccccccc
Q 006019 151 LLDNNDFVGSLSPEIYKLQVLS---ESQVDEG-QLSSAAK 186 (664)
Q Consensus 151 ~l~~N~~~g~iP~~~~~l~~L~---~l~l~~n-~l~g~~p 186 (664)
++++|++++ +|. +..+++|+ +|++++| ++++..+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~ 148 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPV 148 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCc
Confidence 999999997 887 88999998 9999999 8876544
No 316
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.29 E-value=4.2e-12 Score=121.90 Aligned_cols=108 Identities=11% Similarity=0.193 Sum_probs=99.1
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+. .++.+..+++|+.|+|++|.+++..|..++.+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 47999999999654 4568999999999999999999989999999999999999999999989999999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
++|.+.+.+| .+.++++|++|++++|++++
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcC
Confidence 9999666787 69999999999999999987
No 317
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.29 E-value=5.7e-12 Score=142.59 Aligned_cols=115 Identities=18% Similarity=0.195 Sum_probs=108.4
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..|..+.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..++.+++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 58999999999999888888999999999999999999988999999999999999999999877788999999999999
Q ss_pred ccCcccc-cCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVG-SLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g-~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|.+++ .+|..++++++|++|++++|++++..|.
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 9999986 7899999999999999999999987765
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.29 E-value=1.3e-12 Score=135.11 Aligned_cols=111 Identities=14% Similarity=0.231 Sum_probs=93.6
Q ss_pred cEEEEEeCCCCc-ccccccccc-------CCCCCCEEEccCCcccccCCccc--CCCCCCCEEEeecCcccccCCccccC
Q 006019 74 KVVNLNLKDLCL-EGTLAPEIQ-------SLTHIKSIILRNNSFSGIIPEGF--GELEELEVLDFGHNNFSGPLPNDLGI 143 (664)
Q Consensus 74 ~v~~l~L~~~~l-~g~ip~~~~-------~l~~L~~l~L~~N~l~g~ip~~~--~~l~~L~~L~l~~N~l~g~ip~~~~~ 143 (664)
.++.|+|++|.+ .+.+|..+. ++++|+.|+|++|.++|.+|..+ +.+++|++|+|++|++++. |..++.
T Consensus 64 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~ 142 (312)
T 1wwl_A 64 IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE 142 (312)
T ss_dssp HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH
T ss_pred HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH
Confidence 477888888888 567777766 78899999999999998888876 8888999999999999876 877777
Q ss_pred C-----cccceeecccCcccccCCccccCCCCCCEeeCCCCcccccc
Q 006019 144 N-----HSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAA 185 (664)
Q Consensus 144 ~-----~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~ 185 (664)
+ ++|++|+|++|++++..|..++++++|++|+|++|++.|.+
T Consensus 143 l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp HHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH
T ss_pred HHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch
Confidence 6 88999999999998888888889999999999999888763
No 319
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.29 E-value=1.4e-11 Score=125.97 Aligned_cols=112 Identities=20% Similarity=0.187 Sum_probs=100.6
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
..++.|+|++|.+++..+..+.++++|+.|+|++|.+++..+ . +.+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 368999999999998888889999999999999999987544 3 78999999999999998 78999999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..|..+.++++|++|+|++|++++..+.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~ 142 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPG 142 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChh
Confidence 99999977778899999999999999999975543
No 320
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.29 E-value=1.7e-11 Score=115.41 Aligned_cols=109 Identities=21% Similarity=0.233 Sum_probs=94.6
Q ss_pred EEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeeccc
Q 006019 75 VVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDN 154 (664)
Q Consensus 75 v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~ 154 (664)
.+.+++++++++ .+|..+ .++|+.|+|++|.+++..+..++.+++|++|+|++|++++..+..+..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467889999987 466544 37999999999999977777789999999999999999976666679999999999999
Q ss_pred CcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 155 NDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 155 N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
|++++..|..+.++++|++|++++|++++..+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 117 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPD 117 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCH
Confidence 99997777778999999999999999996544
No 321
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.29 E-value=6e-12 Score=144.46 Aligned_cols=115 Identities=23% Similarity=0.217 Sum_probs=100.6
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|++++..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..++++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 37899999999999877777999999999999999999888888999999999999999999544446889999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++..|..++++++|++|+|++|++++..|.
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 139 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG 139 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCch
Confidence 99999877777899999999999999999887765
No 322
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.28 E-value=7.1e-12 Score=117.31 Aligned_cols=100 Identities=25% Similarity=0.257 Sum_probs=89.7
Q ss_pred CccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecC
Q 006019 63 CSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHN 131 (664)
Q Consensus 63 C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N 131 (664)
|+|+.+.|+. .+++.|+|++|.|++..|..+.++++|+.|+|++|.|++..|..|..+++|++|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 6899999973 26789999999999988888999999999999999999777777899999999999999
Q ss_pred cccccCCccccCCcccceeecccCcccccCC
Q 006019 132 NFSGPLPNDLGINHSLTILLLDNNDFVGSLS 162 (664)
Q Consensus 132 ~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP 162 (664)
+|++..|..+..+++|++|+|++|.|++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997666679999999999999999987654
No 323
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.27 E-value=1.4e-11 Score=128.36 Aligned_cols=118 Identities=23% Similarity=0.339 Sum_probs=106.9
Q ss_pred CccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecC
Q 006019 63 CSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHN 131 (664)
Q Consensus 63 C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N 131 (664)
|.|..+.|+. .+++.|+|++|.+++..|..+.++++|+.|+|++|.+++..|..|+++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 7899999973 26899999999999877778999999999999999999988999999999999999999
Q ss_pred cccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 132 NFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 132 ~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
+++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|.++.
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 161 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN 161 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc
Confidence 999 7888775 899999999999997666678999999999999999963
No 324
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.27 E-value=7.5e-12 Score=140.33 Aligned_cols=115 Identities=20% Similarity=0.202 Sum_probs=102.9
Q ss_pred CcEEEEEeCCCCcccccc-ccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCccc-ccCCccccCCccccee
Q 006019 73 GKVVNLNLKDLCLEGTLA-PEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFS-GPLPNDLGINHSLTIL 150 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip-~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~-g~ip~~~~~~~~L~~l 150 (664)
.+++.|+|++|.+.+..| ..+.++++|+.|+|++|.+.+.+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 467899999999988766 46889999999999999999999999999999999999999998 6899999999999999
Q ss_pred ecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 151 LLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 151 ~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+|++|++++..|..+.++++|++|++++|++++..|.
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHH
Confidence 9999999988899999999999999999999987664
No 325
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.26 E-value=1.2e-11 Score=131.98 Aligned_cols=112 Identities=18% Similarity=0.232 Sum_probs=97.5
Q ss_pred cEEEEEeCCCCcccccccc-ccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 74 KVVNLNLKDLCLEGTLAPE-IQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~-~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
+++.|+++++.++. +|+. +..+++|+.|+|++|.+.+..|..|..+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 46 ~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMRK-LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEESE-ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchhh-CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 56789999988774 5654 688999999999999999877889999999999999999999887888899999999999
Q ss_pred ccCcccccCCcc-ccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPE-IYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~-~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|+++ .+|.. +.++++|++|++++|++++..|.
T Consensus 125 ~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~ 159 (390)
T 3o6n_A 125 ERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDD 159 (390)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCccC-cCCHHHhcCCCCCcEEECCCCccCccChh
Confidence 999998 56665 58999999999999999876664
No 326
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.26 E-value=1.1e-11 Score=131.02 Aligned_cols=112 Identities=20% Similarity=0.166 Sum_probs=101.1
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.|++..+..+.++++|+.|+|++|.|++..+..|..+++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 58999999999999877778999999999999999999877778999999999999999999888899999999999999
Q ss_pred ccCcccccCCccc----cCCCCCCEeeCCCCcccccc
Q 006019 153 DNNDFVGSLSPEI----YKLQVLSESQVDEGQLSSAA 185 (664)
Q Consensus 153 ~~N~~~g~iP~~~----~~l~~L~~l~l~~n~l~g~~ 185 (664)
++|++++ +|..+ .++++|+.|+|++|+|++..
T Consensus 144 ~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 144 SQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp CSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCC
T ss_pred CCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccC
Confidence 9999995 67665 57999999999999999643
No 327
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.26 E-value=2.2e-12 Score=117.77 Aligned_cols=104 Identities=17% Similarity=0.112 Sum_probs=94.6
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccc-cCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSG-PLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g-~ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|.+++. ..++.+++|+.|+|++|.+++.+|..++.+++|++|+|++|++++ ..|..++.+++|++|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 5899999999999976 789999999999999999999899888889999999999999997 3558899999999999
Q ss_pred cccCcccccCC---ccccCCCCCCEeeCCC
Q 006019 152 LDNNDFVGSLS---PEIYKLQVLSESQVDE 178 (664)
Q Consensus 152 l~~N~~~g~iP---~~~~~l~~L~~l~l~~ 178 (664)
+++|.+++..+ ..+..+++|++|++++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999997766 5789999999999874
No 328
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.26 E-value=4.4e-12 Score=118.37 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=98.3
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCccccc-CCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGP-LPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~-ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|++|+|++|++++. .+..+..+++|++|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 5899999999999976 7899999999999999999998998888899999999999999963 227899999999999
Q ss_pred cccCcccccCC---ccccCCCCCCEeeCCCCcccc
Q 006019 152 LDNNDFVGSLS---PEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 152 l~~N~~~g~iP---~~~~~l~~L~~l~l~~n~l~g 183 (664)
+++|.+++..+ ..+..+++|++|++++|.+..
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 99999996655 478999999999999998864
No 329
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.26 E-value=8.9e-12 Score=141.34 Aligned_cols=114 Identities=19% Similarity=0.205 Sum_probs=104.3
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLD 153 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~ 153 (664)
+++.|+|++|.|++..|..|.+|++|++|+|++|.|++..|..|.+|++|++|+|++|++++..+..++++++|++|+|+
T Consensus 77 ~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls 156 (635)
T 4g8a_A 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 156 (635)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccc
Confidence 68999999999997666679999999999999999998777789999999999999999998666679999999999999
Q ss_pred cCcccc-cCCccccCCCCCCEeeCCCCcccccccc
Q 006019 154 NNDFVG-SLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 154 ~N~~~g-~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+|.+++ .+|..++++++|++|++++|++++..|.
T Consensus 157 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 157 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 999976 6789999999999999999999987765
No 330
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.25 E-value=1.9e-11 Score=127.24 Aligned_cols=119 Identities=24% Similarity=0.374 Sum_probs=105.3
Q ss_pred CCccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeec
Q 006019 62 PCSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGH 130 (664)
Q Consensus 62 ~C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~ 130 (664)
.|.|+.+.|++ ..++.|+|++|++++..+..+.++++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 36899999973 2678999999999987777899999999999999999998899999999999999999
Q ss_pred CcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 131 NNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 131 N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
|+++ .+|..+. ++|+.|++++|++++..+..+.++++|++|++++|+++.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 159 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc
Confidence 9998 6887764 789999999999997777778899999999999998863
No 331
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.25 E-value=1.3e-11 Score=139.33 Aligned_cols=112 Identities=21% Similarity=0.205 Sum_probs=103.5
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..|..++.+++|+.|+|++|.+++..|..|+++++|++|+|++|.+++..+..++++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 47899999999999888889999999999999999999988888999999999999999999544444689999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
++|.+++..|..++++++|++|+|++|++++.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 99999999998999999999999999999975
No 332
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.25 E-value=1.3e-12 Score=134.98 Aligned_cols=110 Identities=21% Similarity=0.281 Sum_probs=81.6
Q ss_pred CcEEEEEeCCCCccccccccc--cCCCCCCEEEccCCcccccCCcccCCC-----CCCCEEEeecCcccccCCccccCCc
Q 006019 73 GKVVNLNLKDLCLEGTLAPEI--QSLTHIKSIILRNNSFSGIIPEGFGEL-----EELEVLDFGHNNFSGPLPNDLGINH 145 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~--~~l~~L~~l~L~~N~l~g~ip~~~~~l-----~~L~~L~l~~N~l~g~ip~~~~~~~ 145 (664)
.+++.|+|++|.++|.+|..+ ..+++|+.|+|++|.+++. |..++.+ ++|++|+|++|++++..|..++.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 367777777777777777765 7777788888888877766 6666665 7778888888887776667777777
Q ss_pred ccceeecccCccccc--CCccc--cCCCCCCEeeCCCCcccc
Q 006019 146 SLTILLLDNNDFVGS--LSPEI--YKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 146 ~L~~l~l~~N~~~g~--iP~~~--~~l~~L~~l~l~~n~l~g 183 (664)
+|++|+|++|++.|. +|..+ .++++|++|+|++|++++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc
Confidence 788888887777766 34455 677777888888777773
No 333
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.24 E-value=6.2e-12 Score=139.54 Aligned_cols=108 Identities=22% Similarity=0.257 Sum_probs=99.4
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..|..+.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 58999999999999877788999999999999999999988999999999999999999999 68876 8999999999
Q ss_pred ccCcccc-cCCccccCCCCCCEeeCCCCcccc
Q 006019 153 DNNDFVG-SLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 153 ~~N~~~g-~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
++|++++ .+|..++++++|++|++++|++++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~ 129 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK 129 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch
Confidence 9999988 689999999999999999999987
No 334
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.23 E-value=3e-11 Score=135.48 Aligned_cols=115 Identities=17% Similarity=0.087 Sum_probs=94.9
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..+..+.++++|+.|+|++|.+++..|..|+++++|++|+|++|++++..|..++++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 36788888888888777778888888888888888888877778888888888888888888777778888888888888
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccc-cccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSS-AAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g-~~p~ 187 (664)
++|++++..+..++++++|++|++++|++++ .+|.
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~ 143 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPE 143 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCG
T ss_pred cccccccCCCccccccccccEEecCCCccceecChh
Confidence 8888886555568888888888888888876 4565
No 335
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.23 E-value=1.9e-11 Score=115.00 Aligned_cols=109 Identities=19% Similarity=0.234 Sum_probs=92.1
Q ss_pred CcEEEEEeCCCCccccccccccCCC-CCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLT-HIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~-~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|+++ .+| .+..+. +|+.|+|++|.+++. ..++.+++|++|+|++|++++..|..++.+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~-~i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCC-SCC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCc-hhH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 47899999999999 455 466555 999999999999975 6899999999999999999964334448999999999
Q ss_pred cccCcccccCCc--cccCCCCCCEeeCCCCcccccccc
Q 006019 152 LDNNDFVGSLSP--EIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP~--~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++|+++ .+|. .+..+++|++|++++|.++. +|.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~ 130 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKH 130 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STT
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHh
Confidence 9999994 6887 88999999999999999974 443
No 336
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.22 E-value=1.8e-11 Score=137.18 Aligned_cols=108 Identities=22% Similarity=0.228 Sum_probs=100.9
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..|..+.++++|+.|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999877789999999999999999999988999999999999999999999 68877 8999999999
Q ss_pred ccCcccc-cCCccccCCCCCCEeeCCCCcccc
Q 006019 153 DNNDFVG-SLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 153 ~~N~~~g-~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
++|++++ .+|..++++++|++|++++|++++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 9999997 678899999999999999999986
No 337
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.20 E-value=2.1e-11 Score=143.33 Aligned_cols=115 Identities=19% Similarity=0.185 Sum_probs=94.9
Q ss_pred CcEEEEEeCCCCccccc-cccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCcc--ccCCcccce
Q 006019 73 GKVVNLNLKDLCLEGTL-APEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPND--LGINHSLTI 149 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~i-p~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~--~~~~~~L~~ 149 (664)
.+++.|+|++|.+.+.+ |..+.+|++|++|+|++|.+.+..|..|+++++|++|+|++|++++.+|.. ++++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 47888888888777777 556888888888888888888888888888888888888888888877765 788888888
Q ss_pred eecccCcccccCC-ccccCCCCCCEeeCCCCcccccccc
Q 006019 150 LLLDNNDFVGSLS-PEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 150 l~l~~N~~~g~iP-~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|+|++|.+++..| ..++++++|++|+|++|++++..|.
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 8888888887655 5688888888888888888877665
No 338
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.20 E-value=2.2e-11 Score=133.83 Aligned_cols=122 Identities=16% Similarity=0.106 Sum_probs=107.5
Q ss_pred CCccceeEecC-CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccC-CCCCCCEEEeecCcccccCCc
Q 006019 62 PCSWFGVECSD-GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFG-ELEELEVLDFGHNNFSGPLPN 139 (664)
Q Consensus 62 ~C~w~gv~C~~-~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~-~l~~L~~L~l~~N~l~g~ip~ 139 (664)
.|.+.++.|.. .++..|+|++|.+++..|..++++++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.+++. |
T Consensus 108 ~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~- 185 (487)
T 3oja_A 108 NNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K- 185 (487)
T ss_dssp SSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-
T ss_pred CCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-
Confidence 35667777764 6899999999999999898999999999999999999999998886 899999999999999976 3
Q ss_pred cccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 140 DLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 140 ~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
.+..+++|+.|+|++|++++ +|+.+..+++|+.|+|++|++++ +|.
T Consensus 186 ~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~ 231 (487)
T 3oja_A 186 GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEK 231 (487)
T ss_dssp CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECT
T ss_pred ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cch
Confidence 34569999999999999997 56669999999999999999997 564
No 339
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.19 E-value=9.5e-12 Score=138.94 Aligned_cols=115 Identities=18% Similarity=0.210 Sum_probs=106.4
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccc-cCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSG-PLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g-~ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|.+++..|..++++++|++|+|++|.+++..|..|+++++|++|+|++|++++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 589999999999999888889999999999999999998888779999999999999999997 5788899999999999
Q ss_pred cccCcccccCC-ccccCCCCCCEeeCCCCcccccccc
Q 006019 152 LDNNDFVGSLS-PEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP-~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+++|.+.+.+| ..+.++++|++|++++|++++.+|.
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 99999777887 4799999999999999999998886
No 340
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.19 E-value=2.3e-11 Score=136.28 Aligned_cols=94 Identities=14% Similarity=0.110 Sum_probs=65.5
Q ss_pred cCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccc--cCCccccCCcccceeecccCcccccCCcc-ccCCCC
Q 006019 94 QSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSG--PLPNDLGINHSLTILLLDNNDFVGSLSPE-IYKLQV 170 (664)
Q Consensus 94 ~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~~~~L~~l~l~~N~~~g~iP~~-~~~l~~ 170 (664)
..+++|+.|+|++|.+++.+|..++++++|+.|+|++|++++ .+|..++.+++|+.|+|++|++++.+|.. +..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 556677777777777777777777777777777777777775 34455667777777777777777666654 556677
Q ss_pred CCEeeCCCCcccccccc
Q 006019 171 LSESQVDEGQLSSAAKK 187 (664)
Q Consensus 171 L~~l~l~~n~l~g~~p~ 187 (664)
|++|++++|++++.+|.
T Consensus 430 L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp CCEEECCSSCCCGGGGS
T ss_pred CCEEECCCCCCCcchhh
Confidence 77777777777766664
No 341
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.18 E-value=2.6e-11 Score=134.52 Aligned_cols=112 Identities=16% Similarity=0.133 Sum_probs=73.2
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccc--cCCccccCCcccceee
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSG--PLPNDLGINHSLTILL 151 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~~~~L~~l~ 151 (664)
+++.|++++|++.+.. ....+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++ .+|..++.+++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 4666777766655322 12566667777777777776666666777777777777777765 5556666677777777
Q ss_pred cccCcccccCCcc-ccCCCCCCEeeCCCCcccccccc
Q 006019 152 LDNNDFVGSLSPE-IYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP~~-~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++|.+++.+|.. +..+++|++|++++|++++.+|.
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 417 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGG
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhh
Confidence 7777776666654 55666777777777777666654
No 342
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.18 E-value=5.3e-11 Score=126.96 Aligned_cols=111 Identities=23% Similarity=0.269 Sum_probs=102.1
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCcc-ccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPND-LGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~~~~L~~l~ 151 (664)
.+++.|+|++|.+++..+..+..+++|+.|+|++|.+.+..|..++++++|++|+|++|+++ .+|.. +..+++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 36899999999999877778999999999999999999988888999999999999999999 56665 58999999999
Q ss_pred cccCcccccCCccccCCCCCCEeeCCCCccccc
Q 006019 152 LDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 152 l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
|++|++++..|..+.++++|++|++++|++++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 999999988888899999999999999999864
No 343
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.18 E-value=3.3e-11 Score=132.18 Aligned_cols=114 Identities=20% Similarity=0.193 Sum_probs=102.2
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..|..+.++++|+.|+|++|.+++..+..|.++++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 47899999999999888889999999999999999998665667889999999999999999988888999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|.+++..|..+.++++|++|+|++|++++..+
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 9999998888889999999999999999986544
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.17 E-value=1.2e-11 Score=127.78 Aligned_cols=114 Identities=12% Similarity=0.052 Sum_probs=67.2
Q ss_pred cEEEEEeCCCCcccccc----ccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCccccc--CC--ccccCCc
Q 006019 74 KVVNLNLKDLCLEGTLA----PEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGP--LP--NDLGINH 145 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip----~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~--ip--~~~~~~~ 145 (664)
+++.|+|++|.+++..+ ..+..+++|+.|+|++|.+.+..|..++.+++|++|+|++|++.+. ++ ..++.++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 56666666666666544 2344566666666666666666666666666666666666666542 22 2234566
Q ss_pred ccceeecccCccc--ccCCcc-ccCCCCCCEeeCCCCcccccccc
Q 006019 146 SLTILLLDNNDFV--GSLSPE-IYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 146 ~L~~l~l~~N~~~--g~iP~~-~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+|++|+|++|+++ +.++.. +.++++|++|+|++|++++.+|.
T Consensus 198 ~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~ 242 (310)
T 4glp_A 198 AIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNP 242 (310)
T ss_dssp CCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCS
T ss_pred CCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchh
Confidence 6666666666665 122222 34566666666666666666543
No 345
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.17 E-value=3.7e-11 Score=137.83 Aligned_cols=115 Identities=17% Similarity=0.162 Sum_probs=100.6
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..|..++++++|+.|+|++|.+++..+..|+++++|++|+|++|++++..|..++++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 47899999999999888888999999999999999998654556899999999999999998766678899999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|.+++..|..++++++|++|++++|++++..|.
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99999988888889999999999999999887664
No 346
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.17 E-value=4.8e-11 Score=134.90 Aligned_cols=115 Identities=21% Similarity=0.208 Sum_probs=104.0
Q ss_pred CcEEEEEeCCCCcccccccc-ccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCccccc---CCccccCCcccc
Q 006019 73 GKVVNLNLKDLCLEGTLAPE-IQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGP---LPNDLGINHSLT 148 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~-~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~---ip~~~~~~~~L~ 148 (664)
.+++.|+|++|.+.+..|+. +.++++|+.|+|++|.+.+..|..++.+++|+.|+|++|++++. .+..+..+++|+
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 47899999999999887765 89999999999999999999999999999999999999999873 335688999999
Q ss_pred eeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 149 ILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 149 ~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
.|+|++|++++..|..+.++++|++|+|++|++++.+|.
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 518 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIE 518 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGG
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChh
Confidence 999999999999999999999999999999999998875
No 347
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.16 E-value=1.7e-11 Score=115.35 Aligned_cols=107 Identities=20% Similarity=0.198 Sum_probs=95.3
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCc--cccCCcccceee
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPN--DLGINHSLTILL 151 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~--~~~~~~~L~~l~ 151 (664)
+++.|+|++|.+++. +.+..+++|+.|+|++|.+++..|..++.+++|++|+|++|+++ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 899999999999974 68999999999999999999654455589999999999999996 6787 789999999999
Q ss_pred cccCcccccCCcc----ccCCCCCCEeeCCCCccccc
Q 006019 152 LDNNDFVGSLSPE----IYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 152 l~~N~~~g~iP~~----~~~l~~L~~l~l~~n~l~g~ 184 (664)
+++|.++ .+|.. +..+++|+.|+++.|.....
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHHH
Confidence 9999998 67775 89999999999999987643
No 348
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.16 E-value=2.4e-11 Score=125.42 Aligned_cols=109 Identities=21% Similarity=0.186 Sum_probs=79.2
Q ss_pred cEEEEEeCCCCccccccccc--cCCCCCCEEEccCCcccccCC----cccCCCCCCCEEEeecCcccccCCccccCCccc
Q 006019 74 KVVNLNLKDLCLEGTLAPEI--QSLTHIKSIILRNNSFSGIIP----EGFGELEELEVLDFGHNNFSGPLPNDLGINHSL 147 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~--~~l~~L~~l~L~~N~l~g~ip----~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L 147 (664)
+++.|+|++|.+.|.+|..+ ..+++|+.|+|++|.+++.+| ..+..+++|++|+|++|++++..|..++.+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47777777777777777776 777788888888888777655 344567778888888888877666777777788
Q ss_pred ceeecccCccccc--CCcc--ccCCCCCCEeeCCCCccc
Q 006019 148 TILLLDNNDFVGS--LSPE--IYKLQVLSESQVDEGQLS 182 (664)
Q Consensus 148 ~~l~l~~N~~~g~--iP~~--~~~l~~L~~l~l~~n~l~ 182 (664)
++|+|++|++.|. ++.. +.++++|++|+|++|+++
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 210 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME 210 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC
Confidence 8888888877653 3222 357777888888888775
No 349
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.15 E-value=4.3e-11 Score=118.48 Aligned_cols=112 Identities=16% Similarity=0.177 Sum_probs=99.7
Q ss_pred CcEEEEEeCCCC-ccccccccccCCCCCCEEEccC-CcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccc--
Q 006019 73 GKVVNLNLKDLC-LEGTLAPEIQSLTHIKSIILRN-NSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLT-- 148 (664)
Q Consensus 73 ~~v~~l~L~~~~-l~g~ip~~~~~l~~L~~l~L~~-N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~-- 148 (664)
.+++.|+|++|. +++..+..+.++++|+.|+|++ |.+++..+..|.++++|++|+|++|++++ +|. ++.+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 479999999997 7755555799999999999998 99997777889999999999999999997 887 88889998
Q ss_pred -eeecccC-cccccCCccccCCCCCC-EeeCCCCcccccccc
Q 006019 149 -ILLLDNN-DFVGSLSPEIYKLQVLS-ESQVDEGQLSSAAKK 187 (664)
Q Consensus 149 -~l~l~~N-~~~g~iP~~~~~l~~L~-~l~l~~n~l~g~~p~ 187 (664)
+|++++| ++++..+..+.++++|+ .|++++|+++ .+|.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~ 173 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQG 173 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECT
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCH
Confidence 9999999 99876666799999999 9999999998 6775
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.13 E-value=4.8e-11 Score=137.45 Aligned_cols=111 Identities=25% Similarity=0.335 Sum_probs=107.0
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
..+..|+|++|.+. .+|..+++|++|+.|+|++|.|+ .||..|++|++|++|+|++|+|+ .||..++.+++|++|+|
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 57899999999998 89999999999999999999999 89999999999999999999999 89999999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|.|+ .||..|+++++|++|+|++|.|+|.+|.
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 999997 8999999999999999999999999986
No 351
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.13 E-value=2.1e-10 Score=124.38 Aligned_cols=114 Identities=17% Similarity=0.098 Sum_probs=97.4
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..+..+.++++|+.|+|++|.+++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47899999999999877788999999999999999999766667999999999999999999766667888999999999
Q ss_pred ccCcccccCCc-cccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSP-EIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~-~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|+..+.+|. .+.++++|++|+|++|+++ .+|.
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~ 202 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN 202 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-cccc
Confidence 98766666666 5778889999999999887 4554
No 352
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.12 E-value=1.4e-10 Score=120.60 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=93.9
Q ss_pred CcEEEEEeCCCCcc--ccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCccccee
Q 006019 73 GKVVNLNLKDLCLE--GTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTIL 150 (664)
Q Consensus 73 ~~v~~l~L~~~~l~--g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l 150 (664)
.+++.|+|++|.+. |..+..+.++++|+.|++++|.++. +|..+. ++|+.|+|++|++++..|..+..+++|+.|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 47889999999985 4677788999999999999999874 776654 789999999999998878888889999999
Q ss_pred ecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 151 LLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 151 ~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+|++|.+++..|..+..+++|++|++++|+++ .+|.
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 99999998877778888999999999999888 5664
No 353
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.12 E-value=1.1e-10 Score=120.79 Aligned_cols=107 Identities=14% Similarity=0.083 Sum_probs=65.0
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCccc-CCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGF-GELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~-~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
+++.|+|++|.+++..+..+..+++|+.|+|++|.+++..|..+ ..+++|++|+|++|++++. | ....+++|+.|+|
T Consensus 121 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~L 198 (317)
T 3o53_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDL 198 (317)
T ss_dssp SCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEEC
T ss_pred CCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEEC
Confidence 45566666666665555556666666666666666666555554 3566666666666666643 2 2234666666666
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
++|++++ +|+.+..+++|+.|+|++|++++
T Consensus 199 s~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 199 SSNKLAF-MGPEFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp CSSCCCE-ECGGGGGGTTCSEEECTTSCCCE
T ss_pred CCCcCCc-chhhhcccCcccEEECcCCcccc
Confidence 6666663 44456666666666666666663
No 354
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.11 E-value=1.4e-10 Score=108.80 Aligned_cols=98 Identities=20% Similarity=0.269 Sum_probs=84.7
Q ss_pred CccceeEecC-----------CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecC
Q 006019 63 CSWFGVECSD-----------GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHN 131 (664)
Q Consensus 63 C~w~gv~C~~-----------~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N 131 (664)
|...-+.|++ .+++.|+|++|.|++..|..+.++++|+.|+|++|.|++..+..|.++++|++|+|++|
T Consensus 12 C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 12 CDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp ECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4456677763 36789999999999988889999999999999999999865666799999999999999
Q ss_pred cccccCCccccCCcccceeecccCccccc
Q 006019 132 NFSGPLPNDLGINHSLTILLLDNNDFVGS 160 (664)
Q Consensus 132 ~l~g~ip~~~~~~~~L~~l~l~~N~~~g~ 160 (664)
++++..+..+..+++|++|+|++|.|...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99965555599999999999999999854
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.11 E-value=9e-11 Score=131.06 Aligned_cols=101 Identities=20% Similarity=0.233 Sum_probs=92.0
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccC-CccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPL-PNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~i-p~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|.|+ .+|..+++|++|+.|+|++|.|++ +| .++.|++|+.|+|++|++++.+ |..++.+++|+.|+
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 58999999999999 899999999999999999999997 78 8999999999999999999887 99999999999999
Q ss_pred cccCcccccCCcc---ccCCCCCCEeeC
Q 006019 152 LDNNDFVGSLSPE---IYKLQVLSESQV 176 (664)
Q Consensus 152 l~~N~~~g~iP~~---~~~l~~L~~l~l 176 (664)
|++|.+++..|.. +..+++|+.|++
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999876632 335889998875
No 356
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.11 E-value=1.2e-10 Score=126.68 Aligned_cols=113 Identities=21% Similarity=0.218 Sum_probs=101.5
Q ss_pred CcEEEEEeCCCCccccccc-cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAP-EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~-~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.++..|+|++++.-+.+++ .+.++++|+.|+|++|.+++ +| .+..+++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 171 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 248 (452)
T 3zyi_A 171 PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLW 248 (452)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEE
T ss_pred CcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEE
Confidence 3788999999666667776 58999999999999999985 55 588999999999999999998899999999999999
Q ss_pred cccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 152 LDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++|++++..|..+.++++|+.|+|++|++++..+.
T Consensus 249 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 284 (452)
T 3zyi_A 249 VMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHD 284 (452)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred eCCCcCceECHHHhcCCCCCCEEECCCCcCCccChH
Confidence 999999999999999999999999999999965554
No 357
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.10 E-value=9.3e-13 Score=126.64 Aligned_cols=110 Identities=17% Similarity=0.190 Sum_probs=84.3
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++ +| .+.++++|+.|+|++|.++ .+|..+..+++|++|+|++|++++ +| .++.+++|++|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 467888888888876 66 7788888888888888887 677777777788888888888886 55 5777888888888
Q ss_pred ccCcccccCC-ccccCCCCCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLS-PEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP-~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|++++.-+ ..+.++++|++|++++|.+++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 8888874222 4677888888888888888877664
No 358
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.10 E-value=5.6e-11 Score=124.97 Aligned_cols=114 Identities=23% Similarity=0.239 Sum_probs=100.4
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCc--cccCCccccee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPN--DLGINHSLTIL 150 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~--~~~~~~~L~~l 150 (664)
.+++.|+|++|.+++..|..+.++++|++|+|++|.+++..+..++++++|++|+|++|+++ .+|. .+..+++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEE
Confidence 58999999999999877888999999999999999999644445899999999999999999 4665 78899999999
Q ss_pred ecccCc-ccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 151 LLDNND-FVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 151 ~l~~N~-~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++++|+ +.+..|..+.++++|++|++++|++++..|.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 192 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHH
Confidence 999995 6655677899999999999999999988775
No 359
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.10 E-value=7.2e-11 Score=122.98 Aligned_cols=110 Identities=22% Similarity=0.247 Sum_probs=83.8
Q ss_pred CcEEEEEeCCCCcc--ccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCccccee
Q 006019 73 GKVVNLNLKDLCLE--GTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTIL 150 (664)
Q Consensus 73 ~~v~~l~L~~~~l~--g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l 150 (664)
.+++.|+|++|.++ |..|..+..+ +|+.|++++|.+++ +|..+. ++|+.|+|++|.+++..|..+..+++|+.|
T Consensus 147 ~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 222 (332)
T 2ft3_A 147 RNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRL 222 (332)
T ss_dssp SSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCC
T ss_pred ccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 47889999999985 4666677777 78888888888875 666554 577788888888877666777777888888
Q ss_pred ecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 151 LLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 151 ~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
+|++|++++..|..+..+++|++|++++|+++ .+|.
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 88888887766667777888888888888777 5554
No 360
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.10 E-value=1.5e-10 Score=119.75 Aligned_cols=111 Identities=18% Similarity=0.211 Sum_probs=98.3
Q ss_pred CcEEEEEeCCCCccccccccc-cCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEI-QSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~-~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.+++.|+|++|.+++..+..+ ..+++|+.|+|++|.+++. | ....+++|+.|+|++|++++ +|..+..+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEE
Confidence 479999999999998877776 4799999999999999875 3 34469999999999999995 677799999999999
Q ss_pred cccCcccccCCccccCCCCCCEeeCCCCccc-ccccc
Q 006019 152 LDNNDFVGSLSPEIYKLQVLSESQVDEGQLS-SAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~-g~~p~ 187 (664)
|++|+++ .+|..+..+++|+.|++++|.++ +.+|.
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~ 256 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHH
Confidence 9999999 68999999999999999999999 55554
No 361
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.07 E-value=1.4e-10 Score=129.08 Aligned_cols=97 Identities=24% Similarity=0.235 Sum_probs=74.6
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLD 153 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~ 153 (664)
++..|+|++|.|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|++++ +|. +. ++|+.|+|+
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 56666666666665 555 57788888888888886 775 57889999999999997 887 65 889999999
Q ss_pred cCcccccCCccccCCCCC-------CEeeCCCCcccccccc
Q 006019 154 NNDFVGSLSPEIYKLQVL-------SESQVDEGQLSSAAKK 187 (664)
Q Consensus 154 ~N~~~g~iP~~~~~l~~L-------~~l~l~~n~l~g~~p~ 187 (664)
+|+++ .||. +.+ +| +.|+|++|+|+. ||.
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~ 224 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPE 224 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCG
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCH
Confidence 99998 7887 655 67 899999999984 665
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.07 E-value=3.2e-10 Score=115.82 Aligned_cols=106 Identities=24% Similarity=0.350 Sum_probs=79.8
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++. ++ +.++++|+.|+|++|.+++ +| .+..+++|++|+|++|++++ + +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 4678888888888763 33 7888888888888888875 33 47788888888888888876 3 46777888888888
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|++++. +.+.++++|++|++++|++++..|
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 88888764 567788888888888888876544
No 363
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.07 E-value=1.9e-12 Score=124.53 Aligned_cols=106 Identities=24% Similarity=0.368 Sum_probs=96.0
Q ss_pred CcEEEEEeCCCCccccccc------cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcc
Q 006019 73 GKVVNLNLKDLCLEGTLAP------EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHS 146 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~------~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~ 146 (664)
.+++.++|+.+.|+|.+|+ .+..+++|+.|+|++|.+++ +| .+..+++|++|+|++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 4667777788888888876 89999999999999999997 88 8999999999999999999 78988888899
Q ss_pred cceeecccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 147 LTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 147 L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
|+.|+|++|++++ +| .+.++++|++|++++|++++
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 9999999999997 56 68999999999999999986
No 364
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.06 E-value=3.8e-10 Score=113.24 Aligned_cols=136 Identities=13% Similarity=0.095 Sum_probs=103.7
Q ss_pred hcccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CCcccceEEEEecCCCceeEEEEE
Q 006019 375 SNVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HKNFVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 375 ~~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~E 453 (664)
...++.|+.+.||+.... +..+++|......... ...+.+|+++++.++ |..+.++++++...+ ..++|||
T Consensus 19 ~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--~~~lv~e 90 (263)
T 3tm0_A 19 VKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT-----TYDVEREKDMMLWLEGKLPVPKVLHFERHDG--WSNLLMS 90 (263)
T ss_dssp EECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS-----TTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEEE
T ss_pred EeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC-----HHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--ceEEEEE
Confidence 356788888999999854 6788999876432111 135888999999885 677889999988766 6799999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------------------------------------
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLN-------------------------------------- 495 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-------------------------------------- 495 (664)
|+++.+|.+.+. +......++.+++++++.||+..
T Consensus 91 ~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 91 EADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp CCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred ecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 999999877532 11223468889999999999711
Q ss_pred -------------------CCeEEeCcCCCCeEecCCCceEecccCchh
Q 006019 496 -------------------PPIAHNYLNSSAVHLTEDYAAKLSDLSFWN 525 (664)
Q Consensus 496 -------------------~~ivHrDLk~~NILld~~~~~kl~DfGla~ 525 (664)
+.++|+|+++.|||++++..+.|.||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 348999999999999876667899998754
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.05 E-value=4.5e-10 Score=114.69 Aligned_cols=103 Identities=24% Similarity=0.340 Sum_probs=93.2
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++ +| .+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|++++. ..+..+++|+.|+|
T Consensus 90 ~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp TTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 589999999999987 44 599999999999999999873 5789999999999999999974 67899999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
++|++++..| +..+++|++|++++|++++
T Consensus 164 ~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 164 EDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred cCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 9999997655 9999999999999999986
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.04 E-value=6.1e-10 Score=111.92 Aligned_cols=101 Identities=28% Similarity=0.393 Sum_probs=46.4
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLD 153 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~ 153 (664)
+++.|+|++|+++ .+| .+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++ +|... . ++|+.|+|+
T Consensus 42 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~ 114 (263)
T 1xeu_A 42 GVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLD 114 (263)
T ss_dssp TCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECC
T ss_pred cCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEcc
Confidence 3444555555444 233 34445555555555555543222 4445555555555555543 33221 1 445555555
Q ss_pred cCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 154 NNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 154 ~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
+|++++ +| .+.++++|+.|++++|++++
T Consensus 115 ~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 115 NNELRD-TD-SLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp SSCCSB-SG-GGTTCTTCCEEECTTSCCCB
T ss_pred CCccCC-Ch-hhcCcccccEEECCCCcCCC
Confidence 555443 22 34445555555555555443
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.03 E-value=5.6e-10 Score=112.22 Aligned_cols=103 Identities=17% Similarity=0.219 Sum_probs=91.0
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++ +++ +..+++|+.|+|++|.+++ +|... . ++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 589999999999997 444 9999999999999999986 55433 3 899999999999997 44 6999999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
++|++++. | .+..+++|+.|++++|++++.
T Consensus 136 s~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 136 RNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp TTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 99999964 4 799999999999999999976
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.03 E-value=5.1e-10 Score=125.82 Aligned_cols=106 Identities=23% Similarity=0.325 Sum_probs=87.4
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.|++..| +..|++|+.|+|++|.|.+ +| .+..|++|+.|+|++|++++ + +.+..+++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 578899999998887443 8888999999999998886 44 68888889999999998886 3 45888888888888
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|++++. +.++.+++|+.|+|++|++++..|
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 88888865 678888888888888888888766
No 369
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.02 E-value=6.1e-10 Score=121.27 Aligned_cols=100 Identities=18% Similarity=0.287 Sum_probs=72.3
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|++++ +| .++.+++|+.|+|++|.+++ +| ++.+++|++|+|++|++++ +| ++.+++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 467777777777776 34 57777777777777777776 34 6777777777777777776 33 677777777777
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
++|++++ +| ++++++|++|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 7777776 44 6777777777777777776
No 370
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.02 E-value=5e-10 Score=115.35 Aligned_cols=106 Identities=23% Similarity=0.349 Sum_probs=92.4
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++ + +.+..+++|+.|+|++|.+++ +|. +..+++|+.|+|++|++++. |. ++.+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKN-V-SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSC-C-GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-c-hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEc
Confidence 589999999999986 4 479999999999999999987 443 89999999999999999964 43 889999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|++++ +|+ +.++++|+.|++++|++++..+
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh
Confidence 9999986 444 8999999999999999987544
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.02 E-value=6.7e-10 Score=124.84 Aligned_cols=107 Identities=23% Similarity=0.319 Sum_probs=91.5
Q ss_pred CCcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 72 DGKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 72 ~~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
..++..|+|++|.|++ + +.+..|++|+.|+|++|.+++ + +.+..|++|+.|+|++|++++. ..+..+++|+.|+
T Consensus 86 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 159 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 159 (605)
T ss_dssp CTTCCEEECCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEE
T ss_pred CCCCCEEECcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEE
Confidence 3578999999999986 3 378999999999999999986 3 4688999999999999999974 6788999999999
Q ss_pred cccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 152 LDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 152 l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
|++|.+++..| +..+++|+.|+|++|+|++. |.
T Consensus 160 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~ 192 (605)
T 1m9s_A 160 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RA 192 (605)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GG
T ss_pred CcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hH
Confidence 99999997766 88999999999999999873 44
No 372
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.00 E-value=1.5e-10 Score=130.29 Aligned_cols=111 Identities=22% Similarity=0.253 Sum_probs=79.6
Q ss_pred CCCCCCccceeEe--------cCCcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEee
Q 006019 58 TENNPCSWFGVEC--------SDGKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFG 129 (664)
Q Consensus 58 ~~~~~C~w~gv~C--------~~~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~ 129 (664)
.+.+||.|.|..| ...+++.|++++|+|+ .+|..+. ++|+.|+|++|.|+ .+|. .+++|++|+|+
T Consensus 17 ~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls 89 (622)
T 3g06_A 17 RAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVS 89 (622)
T ss_dssp HTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred hcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcC
Confidence 5567899977533 2346888999998888 7887665 78888888888887 5665 46788888888
Q ss_pred cCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 130 HNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 130 ~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
+|+++ .+|. .+++|++|+|++|++++ +|. .+++|+.|++++|++++
T Consensus 90 ~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 90 GNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp SCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc
Confidence 88887 4665 56777777777777774 444 44556666666666554
No 373
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.99 E-value=6.3e-11 Score=123.47 Aligned_cols=111 Identities=18% Similarity=0.179 Sum_probs=82.3
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCccccc-CCcccCCCCCCCEEEeecCcccccCCccccCCcccceee
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGI-IPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILL 151 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~-ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~ 151 (664)
.+++.|++++|.+.+..+. +..+++|+.|+|++|.+++. +|..+..+++|++|+|++|++++.+|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4567777777777765543 56777888888888877765 777777778888888888877777777777778888888
Q ss_pred cccC-cccc-cCCccccCCCCCCEeeCCCC-ccccc
Q 006019 152 LDNN-DFVG-SLSPEIYKLQVLSESQVDEG-QLSSA 184 (664)
Q Consensus 152 l~~N-~~~g-~iP~~~~~l~~L~~l~l~~n-~l~g~ 184 (664)
|++| .+++ .+|..+.++++|++|++++| ++++.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 8877 5766 36666777778888888887 77754
No 374
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.98 E-value=1.4e-10 Score=120.81 Aligned_cols=117 Identities=13% Similarity=0.111 Sum_probs=83.2
Q ss_pred CccceeEecCCcEEEEEeCCCCccccccccccCC--CCCCEEEccCCcccccCCcccCCCCCCCEEEeecCccccc-CCc
Q 006019 63 CSWFGVECSDGKVVNLNLKDLCLEGTLAPEIQSL--THIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGP-LPN 139 (664)
Q Consensus 63 C~w~gv~C~~~~v~~l~L~~~~l~g~ip~~~~~l--~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~-ip~ 139 (664)
.+|.++.|+...++.++++++.+. +..+..+ +.++.|++++|.+.+.+|. +..+++|++|+|++|++++. +|.
T Consensus 37 ~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~ 112 (336)
T 2ast_B 37 KRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHG 112 (336)
T ss_dssp HHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHH
T ss_pred HHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHH
Confidence 357777776556777777777665 3445555 6777777777777766554 45677777777777777765 676
Q ss_pred cccCCcccceeecccCcccccCCccccCCCCCCEeeCCCC-cccc
Q 006019 140 DLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEG-QLSS 183 (664)
Q Consensus 140 ~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n-~l~g 183 (664)
.+..+++|++|+|++|.+++.+|..++++++|++|++++| .+++
T Consensus 113 ~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~ 157 (336)
T 2ast_B 113 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE 157 (336)
T ss_dssp HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH
T ss_pred HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCH
Confidence 7777777777777777777777777777777777777777 5665
No 375
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.98 E-value=1.8e-09 Score=107.81 Aligned_cols=130 Identities=11% Similarity=0.088 Sum_probs=95.6
Q ss_pred ccc-cCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc--ccceEEEEecCCCceeEEEEE
Q 006019 377 VIG-SSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN--FVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 377 ~iG-~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lV~E 453 (664)
.++ .|..+.||+....+|..+++|...... ...+.+|+++++.+++.+ +.+++++....+ ..++|||
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~--------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~--~~~~v~e 95 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAG--RDWLLLG 95 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS--CEEEEEE
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCccc--------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCC--CCEEEEE
Confidence 344 555699999988778889999864321 134778999999886545 456888877655 5699999
Q ss_pred ecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------------------------------------
Q 006019 454 YAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLN-------------------------------------- 495 (664)
Q Consensus 454 y~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~-------------------------------------- 495 (664)
|+++.+|. ... .+ ...++.++++.++.||+..
T Consensus 96 ~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 96 EVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp CCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred ecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 99998884 211 11 2356778888888888643
Q ss_pred ------------------CCeEEeCcCCCCeEecCCCceEecccCchhh
Q 006019 496 ------------------PPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE 526 (664)
Q Consensus 496 ------------------~~ivHrDLk~~NILld~~~~~kl~DfGla~~ 526 (664)
+.++|+|++|.||+++++..++|.|||.+..
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 1299999999999998877778999997643
No 376
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.98 E-value=1.1e-09 Score=112.73 Aligned_cols=106 Identities=24% Similarity=0.378 Sum_probs=93.8
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++ +++ +..+++|+.|+|++|.+++ +| .+..+++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 589999999999986 444 9999999999999999986 44 79999999999999999997 554 899999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|++++..+ +.++++|++|++++|++++..+
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 9999986544 8999999999999999997543
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.98 E-value=8.4e-10 Score=120.17 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=83.2
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++ +| ++.+++|+.|+|++|.+++. .++.+++|+.|+|++|++++ +| ++.+++|+.|++
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 468888999998887 55 78888888888888888874 37888888888888888887 66 778888888888
Q ss_pred ccCcccccCCccccCCC-------CCCEeeCCCCcccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQ-------VLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~-------~L~~l~l~~n~l~g~~p~ 187 (664)
++|+++|..+..+.+++ +|+.|++++|.+.|.+|.
T Consensus 241 ~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~ 282 (457)
T 3bz5_A 241 SVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA 282 (457)
T ss_dssp CSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC
T ss_pred eCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccc
Confidence 88888876555555554 566777777777777773
No 378
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.97 E-value=1e-09 Score=114.78 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=47.8
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLD 153 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~ 153 (664)
++..+++++|.+.+..+ +..+++|+.|+|++|.+++..+ +..+++|+.|++++|++++ + +.+..+++|+.|+++
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~ 273 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVG 273 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEcc
Confidence 44455555555443222 4445555555555555543222 4444555555555554443 2 234444445555555
Q ss_pred cCcccccCCccccCCCCCCEeeCCCCcccccc
Q 006019 154 NNDFVGSLSPEIYKLQVLSESQVDEGQLSSAA 185 (664)
Q Consensus 154 ~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~ 185 (664)
+|++++. +.+..+++|+.|++++|++++..
T Consensus 274 ~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 274 SNQISDI--SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCGGG
T ss_pred CCccCCC--hhhcCCCCCCEEECcCCcCCCcC
Confidence 5544432 23444444555555554444433
No 379
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.97 E-value=1e-10 Score=124.62 Aligned_cols=115 Identities=20% Similarity=0.246 Sum_probs=94.6
Q ss_pred CcEEEEEeCCCCcc-cccc---ccccCCCCCCEEEccCCccc--c---cCCcccCCCCCCCEEEeecCccc----ccCCc
Q 006019 73 GKVVNLNLKDLCLE-GTLA---PEIQSLTHIKSIILRNNSFS--G---IIPEGFGELEELEVLDFGHNNFS----GPLPN 139 (664)
Q Consensus 73 ~~v~~l~L~~~~l~-g~ip---~~~~~l~~L~~l~L~~N~l~--g---~ip~~~~~l~~L~~L~l~~N~l~----g~ip~ 139 (664)
.+++.|+|++|+++ +.++ ..+..+++|+.|+|++|.++ | .+|..+..+++|+.|+|++|+++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 58899999999987 5555 46778889999999999888 4 35557888899999999999986 77888
Q ss_pred cccCCcccceeecccCccccc----CCccc--cCCCCCCEeeCCCCcccc----cccc
Q 006019 140 DLGINHSLTILLLDNNDFVGS----LSPEI--YKLQVLSESQVDEGQLSS----AAKK 187 (664)
Q Consensus 140 ~~~~~~~L~~l~l~~N~~~g~----iP~~~--~~l~~L~~l~l~~n~l~g----~~p~ 187 (664)
.+..+++|+.|+|++|.+++. +|..+ +++++|++|+|++|++++ .+|.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~ 296 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKT 296 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHH
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHH
Confidence 888889999999999998876 67777 448899999999999988 4664
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.96 E-value=7.6e-10 Score=115.79 Aligned_cols=108 Identities=19% Similarity=0.305 Sum_probs=98.2
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++. ++ +..+++|+.|+|++|.+++ + +.+..+++|++|++++|++++ + +.+..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEEC
Confidence 5799999999999864 44 9999999999999999986 3 468999999999999999997 4 46889999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|.+++..|..+.++++|++|++++|++++..|
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 9999999999999999999999999999998777
No 381
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.96 E-value=2.3e-09 Score=116.58 Aligned_cols=79 Identities=23% Similarity=0.363 Sum_probs=47.8
Q ss_pred CCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeC
Q 006019 97 THIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQV 176 (664)
Q Consensus 97 ~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l 176 (664)
++|+.|+|++|.+++ +| .++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 466666666666665 55 46666666666666666664 55432 356666666666665 44 4566666666666
Q ss_pred CCCcccc
Q 006019 177 DEGQLSS 183 (664)
Q Consensus 177 ~~n~l~g 183 (664)
++|++++
T Consensus 203 ~~N~l~~ 209 (454)
T 1jl5_A 203 DNNSLKK 209 (454)
T ss_dssp CSSCCSS
T ss_pred CCCcCCc
Confidence 6666654
No 382
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.95 E-value=1.2e-09 Score=119.30 Aligned_cols=104 Identities=21% Similarity=0.286 Sum_probs=86.2
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++..+ +..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| ++.+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 478899999999887554 8888999999999999887544 7888899999999999887443 778888999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
++|++++..| +..+++|+.|++++|++++.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 9998887766 77888888888888888875
No 383
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=3.2e-09 Score=111.76 Aligned_cols=143 Identities=10% Similarity=0.116 Sum_probs=104.8
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEee--ecccCCCchhHHHHHHHHHHHHhccC--CCcccceEEEEecCCC-ceeEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVS--VASAKDWPKNLEVQFRKKIDTLSKVN--HKNFVNLIGFCEEEEP-FTRMM 450 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~--~~~~~~~~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~-~~~~l 450 (664)
+.++.|.++.||+....+ ..+++|+.. ..... .....+.+|+++++.++ +..+.++++++.+... ...++
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~----~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLL----PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC--------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCC----CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 568999999999998765 567777654 22111 12346788999999987 4568889999876531 13689
Q ss_pred EEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 006019 451 VFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL------------------------------------ 494 (664)
Q Consensus 451 V~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------------------------------------ 494 (664)
||||+++..+.+.. ...++...+..++.++++.|+.||+.
T Consensus 119 vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 99999998875422 23477888899999999999999963
Q ss_pred --------------------CCCeEEeCcCCCCeEecCCCc--eEecccCchhhh
Q 006019 495 --------------------NPPIAHNYLNSSAVHLTEDYA--AKLSDLSFWNEI 527 (664)
Q Consensus 495 --------------------~~~ivHrDLk~~NILld~~~~--~kl~DfGla~~~ 527 (664)
.+.++|+|+++.|||++.++. +.|.||+.+...
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 245999999999999997753 689999987643
No 384
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.92 E-value=9.9e-10 Score=119.51 Aligned_cols=103 Identities=23% Similarity=0.290 Sum_probs=72.7
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccc--cCCcccC-------------CC-CCCCEEEeecCccccc
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSG--IIPEGFG-------------EL-EELEVLDFGHNNFSGP 136 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g--~ip~~~~-------------~l-~~L~~L~l~~N~l~g~ 136 (664)
.+++.|+|++|.+++ +|.. +++|+.|+|++|.+++ .+|..+. .+ ++|+.|++++|++++
T Consensus 257 ~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~- 331 (454)
T 1jl5_A 257 PSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE- 331 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-
T ss_pred cccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-
Confidence 356667777776665 4432 2556666666666665 3332221 22 578888888888886
Q ss_pred CCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccc--cccc
Q 006019 137 LPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS--AAKK 187 (664)
Q Consensus 137 ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g--~~p~ 187 (664)
+|.. +++|+.|++++|+++ .+|. .+++|++|++++|+++| .+|.
T Consensus 332 lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~ 377 (454)
T 1jl5_A 332 LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPE 377 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCT
T ss_pred cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChH
Confidence 7764 578999999999998 5787 47889999999999998 7775
No 385
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.91 E-value=1.5e-09 Score=118.50 Aligned_cols=106 Identities=23% Similarity=0.302 Sum_probs=95.6
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeec
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
.+++.|+|++|.+++.. + +..+++|+.|+|++|.+.+..| ++.+++|+.|+|++|++++..| +..+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~-~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 338 (466)
T 1o6v_A 265 TKLTELKLGANQISNIS-P-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338 (466)
T ss_dssp TTCSEEECCSSCCCCCG-G-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCccc-c-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeEC
Confidence 47899999999999744 3 8999999999999999997554 8899999999999999998766 789999999999
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
++|.+++. +.+.++++|+.|++++|++++.+|
T Consensus 339 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 339 YNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 99999975 579999999999999999999887
No 386
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.91 E-value=2e-09 Score=121.15 Aligned_cols=58 Identities=24% Similarity=0.242 Sum_probs=32.3
Q ss_pred CCCCEEEeecCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCCcccccccc
Q 006019 121 EELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSSAAKK 187 (664)
Q Consensus 121 ~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p~ 187 (664)
++|+.|+|++|++++ +| ..+++|+.|+|++|+++ .||. .+++|+.|+|++|+|+ .+|.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~ 278 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPE 278 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCG
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCH
Confidence 455666666666654 44 33455666666666665 4554 4455666666666665 4443
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.90 E-value=2.8e-10 Score=121.19 Aligned_cols=113 Identities=24% Similarity=0.324 Sum_probs=99.1
Q ss_pred CCcEEEEEeCCCCccc----cccccccCC---------CCCCEEEccCCccc-ccCC---cccCCCCCCCEEEeecCccc
Q 006019 72 DGKVVNLNLKDLCLEG----TLAPEIQSL---------THIKSIILRNNSFS-GIIP---EGFGELEELEVLDFGHNNFS 134 (664)
Q Consensus 72 ~~~v~~l~L~~~~l~g----~ip~~~~~l---------~~L~~l~L~~N~l~-g~ip---~~~~~l~~L~~L~l~~N~l~ 134 (664)
..+++.|+|++|.+++ .++..+..+ ++|+.|+|++|.++ +.+| ..+..+++|+.|+|++|+++
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 4689999999999973 356667777 89999999999998 5666 57788999999999999998
Q ss_pred --c---cCCccccCCcccceeecccCccc----ccCCccccCCCCCCEeeCCCCccccc
Q 006019 135 --G---PLPNDLGINHSLTILLLDNNDFV----GSLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 135 --g---~ip~~~~~~~~L~~l~l~~N~~~----g~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
| .+|..+..+++|+.|+|++|.++ +.+|..+.++++|++|+|++|++++.
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 4 45558889999999999999997 78999999999999999999999876
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.89 E-value=2e-09 Score=112.88 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=75.3
Q ss_pred CccceeEecCC-----------cEEEEEeCCCCccccccc-cccCCCCCCEEEccCCcccccCCc-ccCCCCCCCE-EEe
Q 006019 63 CSWFGVECSDG-----------KVVNLNLKDLCLEGTLAP-EIQSLTHIKSIILRNNSFSGIIPE-GFGELEELEV-LDF 128 (664)
Q Consensus 63 C~w~gv~C~~~-----------~v~~l~L~~~~l~g~ip~-~~~~l~~L~~l~L~~N~l~g~ip~-~~~~l~~L~~-L~l 128 (664)
|+|..|.|++. +++.|+|++|+|+. ||+ .+.+|++|+.|+|++|.+.+.+|. .|.++++|.. +.+
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~-i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRV-IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSE-ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCC-cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 78999999632 45677777777763 443 467777777777777777666654 3566666554 555
Q ss_pred ecCcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCCCC
Q 006019 129 GHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDEG 179 (664)
Q Consensus 129 ~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n 179 (664)
+.|+++...|..+..+++|++|++++|++++..+..+....++..+++.++
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~ 138 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN 138 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc
Confidence 567777655666677777777777777776555545555555666666543
No 389
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.88 E-value=2.5e-09 Score=112.00 Aligned_cols=86 Identities=14% Similarity=0.039 Sum_probs=78.2
Q ss_pred CEEEccCC-cccccCCcccCCCCCCCEEEeec-CcccccCCccccCCcccceeecccCcccccCCccccCCCCCCEeeCC
Q 006019 100 KSIILRNN-SFSGIIPEGFGELEELEVLDFGH-NNFSGPLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVD 177 (664)
Q Consensus 100 ~~l~L~~N-~l~g~ip~~~~~l~~L~~L~l~~-N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~ 177 (664)
..++++++ .|++ ||. |+.+++|+.|+|++ |+|++..|..|+++++|+.|+|++|+|+|..|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789988 8985 898 99999999999996 99998777889999999999999999999999999999999999999
Q ss_pred CCcccccccc
Q 006019 178 EGQLSSAAKK 187 (664)
Q Consensus 178 ~n~l~g~~p~ 187 (664)
+|+|++..+.
T Consensus 89 ~N~l~~~~~~ 98 (347)
T 2ifg_A 89 FNALESLSWK 98 (347)
T ss_dssp SSCCSCCCST
T ss_pred CCccceeCHH
Confidence 9999975554
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.83 E-value=9.6e-10 Score=115.97 Aligned_cols=110 Identities=19% Similarity=0.181 Sum_probs=57.4
Q ss_pred cEEEEEeCCCCcccccc----ccccCCC-CCCEEEccCCcccccCCcccCCC-----CCCCEEEeecCcccccCCccccC
Q 006019 74 KVVNLNLKDLCLEGTLA----PEIQSLT-HIKSIILRNNSFSGIIPEGFGEL-----EELEVLDFGHNNFSGPLPNDLGI 143 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip----~~~~~l~-~L~~l~L~~N~l~g~ip~~~~~l-----~~L~~L~l~~N~l~g~ip~~~~~ 143 (664)
+++.|+|++|.+++.-+ ..+..++ +|+.|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 35556666555554433 3445555 56666666665555544444443 55666666666655544443322
Q ss_pred ----C-cccceeecccCcccccCCcccc----C-CCCCCEeeCCCCcccc
Q 006019 144 ----N-HSLTILLLDNNDFVGSLSPEIY----K-LQVLSESQVDEGQLSS 183 (664)
Q Consensus 144 ----~-~~L~~l~l~~N~~~g~iP~~~~----~-l~~L~~l~l~~n~l~g 183 (664)
+ ++|+.|+|++|++++..+..++ . .++|++|+|++|++++
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 2 5556666666665544443332 2 2455666666665553
No 391
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.82 E-value=2.2e-10 Score=114.29 Aligned_cols=125 Identities=17% Similarity=0.145 Sum_probs=89.1
Q ss_pred CCCccceeEecCC--cEEEEEeCC---CCcccccccc------------------------ccCCCCCCE--EEccCC--
Q 006019 61 NPCSWFGVECSDG--KVVNLNLKD---LCLEGTLAPE------------------------IQSLTHIKS--IILRNN-- 107 (664)
Q Consensus 61 ~~C~w~gv~C~~~--~v~~l~L~~---~~l~g~ip~~------------------------~~~l~~L~~--l~L~~N-- 107 (664)
..|+|.|+.|+.. +|+.+-..+ ..+.|.++++ +...+.|.. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 3578999999853 676655544 2344555431 222223333 455666
Q ss_pred -cccccCCcccCCCCCCCEEEeecCcccc--cCCccccCCcccceeecccCcccccCCccccCCC--CCCEeeCCCCccc
Q 006019 108 -SFSGIIPEGFGELEELEVLDFGHNNFSG--PLPNDLGINHSLTILLLDNNDFVGSLSPEIYKLQ--VLSESQVDEGQLS 182 (664)
Q Consensus 108 -~l~g~ip~~~~~l~~L~~L~l~~N~l~g--~ip~~~~~~~~L~~l~l~~N~~~g~iP~~~~~l~--~L~~l~l~~n~l~ 182 (664)
.+.+.++....++++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++. .++..+. +|++|+|++|.++
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 3334333333568899999999999998 7788888999999999999999975 4455555 9999999999999
Q ss_pred ccccc
Q 006019 183 SAAKK 187 (664)
Q Consensus 183 g~~p~ 187 (664)
+.+|.
T Consensus 234 ~~~~~ 238 (267)
T 3rw6_A 234 DTFRD 238 (267)
T ss_dssp GGCSS
T ss_pred cccCc
Confidence 98874
No 392
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.78 E-value=1.4e-09 Score=114.71 Aligned_cols=105 Identities=17% Similarity=0.104 Sum_probs=45.3
Q ss_pred EeCCCCccccccccccCCCCCCEEEccCCcccccCC----cccCCCC-CCCEEEeecCcccccCCccccCC-----cccc
Q 006019 79 NLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIP----EGFGELE-ELEVLDFGHNNFSGPLPNDLGIN-----HSLT 148 (664)
Q Consensus 79 ~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip----~~~~~l~-~L~~L~l~~N~l~g~ip~~~~~~-----~~L~ 148 (664)
+|+.|+++|.+|..+...++|+.|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 344444444444444444444444444444443333 3334444 44444444444444433333332 4444
Q ss_pred eeecccCcccccCCccccC----C-CCCCEeeCCCCcccc
Q 006019 149 ILLLDNNDFVGSLSPEIYK----L-QVLSESQVDEGQLSS 183 (664)
Q Consensus 149 ~l~l~~N~~~g~iP~~~~~----l-~~L~~l~l~~n~l~g 183 (664)
+|+|++|.+++..+..++. + ++|++|+|++|++++
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 123 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS 123 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc
Confidence 4444444444433332222 1 444444444444443
No 393
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.67 E-value=3.4e-08 Score=103.52 Aligned_cols=107 Identities=8% Similarity=0.076 Sum_probs=90.6
Q ss_pred EEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCc-cccCCcccce-eeccc
Q 006019 77 NLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPN-DLGINHSLTI-LLLDN 154 (664)
Q Consensus 77 ~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~-~~~~~~~L~~-l~l~~ 154 (664)
.++-++++|+ .||..+ .++++.|+|++|.|+...+..|.++++|++|+|++|++.+.+|. .|.++++|+. +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4567888888 688766 46899999999999954445799999999999999999888886 4678888765 67788
Q ss_pred CcccccCCccccCCCCCCEeeCCCCccccccc
Q 006019 155 NDFVGSLSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 155 N~~~g~iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
|++++..|..+..+++|++|++++|++++..+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred CcccccCchhhhhccccccccccccccccCCc
Confidence 99998778889999999999999999987544
No 394
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.60 E-value=3.9e-08 Score=100.89 Aligned_cols=178 Identities=10% Similarity=0.118 Sum_probs=115.7
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CCc--ccceEEEEecCCC-ceeEEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HKN--FVNLIGFCEEEEP-FTRMMV 451 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~n--iv~l~g~~~~~~~-~~~~lV 451 (664)
+.++.|....||+.. ..+++|.... ......+.+|.++|+.+. +.. +.+.+++....+. ...++|
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~-------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKH-------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESS-------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred EecCCCCcceEEEEC----CEEEEEecCC-------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 458999999999863 4577776531 123467899999998884 333 3455555433221 134789
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL------------------------------------- 494 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~------------------------------------- 494 (664)
|||+++..|.+... ..++..++..++.++++.++.||+.
T Consensus 95 m~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999988865322 2356666777777777777777741
Q ss_pred -------------------CCCeEEeCcCCCCeEecC--CCceEecccCchhhhhhhh----hhc----ccc--------
Q 006019 495 -------------------NPPIAHNYLNSSAVHLTE--DYAAKLSDLSFWNEIAMAE----MAA----TSK-------- 537 (664)
Q Consensus 495 -------------------~~~ivHrDLk~~NILld~--~~~~kl~DfGla~~~~~~~----~~~----~~p-------- 537 (664)
.+.++|+|+++.||++++ +..+.|.||+.+....... ... ..+
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 134899999999999998 5568899998765432110 000 000
Q ss_pred cccCCC--C----CCcCCcchhhHHHHHHHHhCCCCc
Q 006019 538 KLSSAP--S----ASLESNVYNFGVLLFEMVTGRLPY 568 (664)
Q Consensus 538 e~~~~~--~----~s~ksDVySfGvvl~El~tG~~P~ 568 (664)
.|.... . .....+.|++|+++|++.+|+.+|
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 010000 0 011258999999999999999887
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.58 E-value=4.4e-09 Score=114.43 Aligned_cols=115 Identities=17% Similarity=0.148 Sum_probs=89.6
Q ss_pred CcEEEEEeCCCCcccc----ccccccCCCCCCEEEccCCcccccCCcccCC-----CCCCCEEEeecCccccc----CCc
Q 006019 73 GKVVNLNLKDLCLEGT----LAPEIQSLTHIKSIILRNNSFSGIIPEGFGE-----LEELEVLDFGHNNFSGP----LPN 139 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~----ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~-----l~~L~~L~l~~N~l~g~----ip~ 139 (664)
.+++.|+|++|.+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5789999999998865 6777888999999999999987654444332 36889999999988875 566
Q ss_pred cccCCcccceeecccCcccccCCccccC-----CCCCCEeeCCCCcccc----cccc
Q 006019 140 DLGINHSLTILLLDNNDFVGSLSPEIYK-----LQVLSESQVDEGQLSS----AAKK 187 (664)
Q Consensus 140 ~~~~~~~L~~l~l~~N~~~g~iP~~~~~-----l~~L~~l~l~~n~l~g----~~p~ 187 (664)
.+..+++|+.|+|++|.+++..+..+++ .++|++|++++|++++ .+|.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 392 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH
Confidence 6777888999999999888766655543 6788899999998886 5554
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.54 E-value=4.1e-09 Score=114.72 Aligned_cols=114 Identities=16% Similarity=0.196 Sum_probs=94.5
Q ss_pred CcEEEEEeCCCCccccc----ccc-ccCCCCCCEEEccCCccccc----CCcccCCCCCCCEEEeecCcccccCCccccC
Q 006019 73 GKVVNLNLKDLCLEGTL----APE-IQSLTHIKSIILRNNSFSGI----IPEGFGELEELEVLDFGHNNFSGPLPNDLGI 143 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~i----p~~-~~~l~~L~~l~L~~N~l~g~----ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~ 143 (664)
.+++.|+|++|.+++.- .+. ...+++|+.|+|++|.+++. +|..+..+++|++|+|++|.+++.-+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 58999999999987642 233 33689999999999999875 7888888999999999999998765544433
Q ss_pred -----CcccceeecccCccccc----CCccccCCCCCCEeeCCCCccccccc
Q 006019 144 -----NHSLTILLLDNNDFVGS----LSPEIYKLQVLSESQVDEGQLSSAAK 186 (664)
Q Consensus 144 -----~~~L~~l~l~~N~~~g~----iP~~~~~l~~L~~l~l~~n~l~g~~p 186 (664)
.++|+.|+|++|.+++. +|..+.++++|++|++++|++++..+
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccH
Confidence 36999999999999876 67788899999999999999987644
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.48 E-value=3.1e-08 Score=98.76 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=69.5
Q ss_pred cCCCCCCEEEccCCcccc--cCCcccCCCCCCCEEEeecCcccccCCccccCCc--ccceeecccCcccccCCc------
Q 006019 94 QSLTHIKSIILRNNSFSG--IIPEGFGELEELEVLDFGHNNFSGPLPNDLGINH--SLTILLLDNNDFVGSLSP------ 163 (664)
Q Consensus 94 ~~l~~L~~l~L~~N~l~g--~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~--~L~~l~l~~N~~~g~iP~------ 163 (664)
.++++|+.|+|++|.|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 578999999999999998 6788888999999999999999975 4455555 899999999999999884
Q ss_pred -cccCCCCCCEeeC
Q 006019 164 -EIYKLQVLSESQV 176 (664)
Q Consensus 164 -~~~~l~~L~~l~l 176 (664)
-+..+++|+.||-
T Consensus 245 ~il~~~P~L~~LDg 258 (267)
T 3rw6_A 245 AIRERFPKLLRLDG 258 (267)
T ss_dssp HHHHHCTTCCEESS
T ss_pred HHHHHCcccCeECC
Confidence 2678889888763
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.47 E-value=3.1e-08 Score=104.59 Aligned_cols=112 Identities=17% Similarity=0.150 Sum_probs=85.5
Q ss_pred CcEEEEEeCCCCccccccccc-cCCCCCCEEEccCCcccccCCccc-----CCCCCCCEEEeecCcccc----cCCcccc
Q 006019 73 GKVVNLNLKDLCLEGTLAPEI-QSLTHIKSIILRNNSFSGIIPEGF-----GELEELEVLDFGHNNFSG----PLPNDLG 142 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~-~~l~~L~~l~L~~N~l~g~ip~~~-----~~l~~L~~L~l~~N~l~g----~ip~~~~ 142 (664)
.+++.|+|++|.++..-...+ ..+++|+.|+|++|.++..-...+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 589999999999875433333 346688999999999976543333 346789999999999875 3455567
Q ss_pred CCcccceeecccCcccc----cCCccccCCCCCCEeeCCCCccccc
Q 006019 143 INHSLTILLLDNNDFVG----SLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 143 ~~~~L~~l~l~~N~~~g----~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
.+++|++|+|++|.++. .++..+...++|+.|+|++|+++..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 78899999999999875 3466677888999999999999753
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.43 E-value=1.5e-06 Score=89.75 Aligned_cols=130 Identities=11% Similarity=0.165 Sum_probs=93.8
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCC----CcccceEEEEecCCCceeEEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNH----KNFVNLIGFCEEEEPFTRMMV 451 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H----~niv~l~g~~~~~~~~~~~lV 451 (664)
+.++.|....||+. +..+++|.... ......+.+|.++++.+++ ..+.+++++ + ..++|
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~-------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~--~~~lv 105 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKR-------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----S--DRFNI 105 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C--SSCEE
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCc-------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C--CcEEE
Confidence 57899999999998 56677776521 1224568999999998876 234555555 2 34799
Q ss_pred EEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCC------------------------------------
Q 006019 452 FEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLN------------------------------------ 495 (664)
Q Consensus 452 ~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~------------------------------------ 495 (664)
|||+++..+.+... ..++..++..++.++++.++.||+..
T Consensus 106 me~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 106 MKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp EECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 99999988864321 23556666677777777777777432
Q ss_pred -------------------------CCeEEeCcCCCCeEecCCCceEecccCchhh
Q 006019 496 -------------------------PPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE 526 (664)
Q Consensus 496 -------------------------~~ivHrDLk~~NILld~~~~~kl~DfGla~~ 526 (664)
+.++|+|+++.|||++.+..+.|.||+.+..
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999977789999997653
No 400
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.42 E-value=6.3e-07 Score=90.94 Aligned_cols=137 Identities=18% Similarity=0.199 Sum_probs=91.2
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCC---cccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHK---NFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.|+.|.++.||+.+..+|..++||+...... .....|..|++.|+.++|. .+.+++++. ..++||
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~lvm 89 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAP-----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAM 89 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCC-----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEE
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCc-----chhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcEEEE
Confidence 57999999999999998899999998643211 1124689999999999875 577888764 237999
Q ss_pred EecCCCChhh-----------hhcccCCC-------------------CCCHHHHH---------H-----------HHH
Q 006019 453 EYAPNGTLFE-----------HIHIKESE-------------------HLDWGMRL---------R-----------IAM 482 (664)
Q Consensus 453 Ey~~~GsL~~-----------~l~~~~~~-------------------~l~~~~~~---------~-----------ia~ 482 (664)
||++++.+.. .||..... .-+|.... + ...
T Consensus 90 e~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~ 169 (288)
T 3d1u_A 90 EWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVR 169 (288)
T ss_dssp ECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHH
T ss_pred EecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 9999987631 23321111 12453221 0 011
Q ss_pred HHHHHHHHh-----hcCCCCeEEeCcCCCCeEecCCCceEecccCchh
Q 006019 483 GMAYCLEHM-----HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN 525 (664)
Q Consensus 483 ~ia~gL~yL-----H~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~ 525 (664)
.+.+.++.+ +...+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 170 ~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 170 LVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 112222223 234567999999999999998 45889999 543
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.32 E-value=7.9e-08 Score=101.43 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=82.7
Q ss_pred CcEEEEEeCCCCcccccccccc-----CCCCCCEEEccCCcccccCCccc-CCCCCCCEEEeecCcccccCCccc-----
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQ-----SLTHIKSIILRNNSFSGIIPEGF-GELEELEVLDFGHNNFSGPLPNDL----- 141 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~-----~l~~L~~l~L~~N~l~g~ip~~~-~~l~~L~~L~l~~N~l~g~ip~~~----- 141 (664)
..+..|+|++|.++..-...+. +.++|+.|+|++|.++..-...+ ..+++|+.|+|++|+++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4788999999998864333333 23789999999999975433333 345689999999999876433333
Q ss_pred cCCcccceeecccCcccc----cCCccccCCCCCCEeeCCCCcccc
Q 006019 142 GINHSLTILLLDNNDFVG----SLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 142 ~~~~~L~~l~l~~N~~~g----~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
...++|+.|+|++|.++. .++..+..+++|++|+|++|+++.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 246789999999999865 356666788999999999999875
No 402
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.18 E-value=1.1e-05 Score=80.78 Aligned_cols=135 Identities=13% Similarity=0.100 Sum_probs=88.5
Q ss_pred cccccCCCe-EEEEEEEC-CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC-CCcccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIG-TVYKGTLS-NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN-HKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G-~Vy~g~~~-~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+..|..| .||+-... ++..+.+|+-.. ....++.+|...|+.+. +--+.++++++.+.+ ..++||
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~--------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--~~~lvm 99 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG--------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--DAWLLT 99 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET--------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--EEEEEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC--------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--eEEEEE
Confidence 345566665 68987754 456788887542 23456888999998874 334677889988776 679999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ--------------------------------------- 493 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~--------------------------------------- 493 (664)
|++++.++.+..... ...+..++.+++..|+-||+
T Consensus 100 e~l~G~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (272)
T 4gkh_A 100 TAIPGKTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNG 173 (272)
T ss_dssp ECCCSEEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTT
T ss_pred EeeCCccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccc
Confidence 999987765532210 01112233333333333332
Q ss_pred -----------------CCCCeEEeCcCCCCeEecCCCceEecccCchhh
Q 006019 494 -----------------LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE 526 (664)
Q Consensus 494 -----------------~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~ 526 (664)
..+.++|+|+.+.|||++++..+-|.||+.+..
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 174 WPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112379999999999999887788999987643
No 403
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.18 E-value=1.2e-05 Score=82.20 Aligned_cols=135 Identities=11% Similarity=0.048 Sum_probs=88.0
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCC---cccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHK---NFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.++.|....||+. |..+++|+-.. ......+.+|.++|+.+++. .+.+.++++..... ..++||
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g-~~~~v~ 92 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDG-NPFVGY 92 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTS-CEEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCC-ceEEEE
Confidence 45788999999987 45677776421 23456789999999999753 35667777753221 468999
Q ss_pred EecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 006019 453 EYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQ--------------------------------------- 493 (664)
Q Consensus 453 Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~--------------------------------------- 493 (664)
||+++..+.+... ..++...+..++.++++.|+.||+
T Consensus 93 e~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 93 RKVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp ECCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred eccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999988765211 112233333334444444333332
Q ss_pred -------------------CCCCeEEeCcCCCCeEecC---CCc-eEecccCchhh
Q 006019 494 -------------------LNPPIAHNYLNSSAVHLTE---DYA-AKLSDLSFWNE 526 (664)
Q Consensus 494 -------------------~~~~ivHrDLk~~NILld~---~~~-~kl~DfGla~~ 526 (664)
..+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999997 354 58999987543
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.17 E-value=3.1e-07 Score=86.77 Aligned_cols=111 Identities=19% Similarity=0.173 Sum_probs=89.0
Q ss_pred CCcEEEEEeCCC-Ccccc----ccccccCCCCCCEEEccCCccccc----CCcccCCCCCCCEEEeecCccccc----CC
Q 006019 72 DGKVVNLNLKDL-CLEGT----LAPEIQSLTHIKSIILRNNSFSGI----IPEGFGELEELEVLDFGHNNFSGP----LP 138 (664)
Q Consensus 72 ~~~v~~l~L~~~-~l~g~----ip~~~~~l~~L~~l~L~~N~l~g~----ip~~~~~l~~L~~L~l~~N~l~g~----ip 138 (664)
...++.|+|++| .++.. +...+...++|+.|+|++|.+... +...+...+.|++|+|++|.++.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 468999999999 88642 455677889999999999999743 455566678899999999999864 45
Q ss_pred ccccCCcccceeec--ccCccccc----CCccccCCCCCCEeeCCCCccc
Q 006019 139 NDLGINHSLTILLL--DNNDFVGS----LSPEIYKLQVLSESQVDEGQLS 182 (664)
Q Consensus 139 ~~~~~~~~L~~l~l--~~N~~~g~----iP~~~~~l~~L~~l~l~~n~l~ 182 (664)
..+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777889999999 88999754 4455667789999999999986
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.17 E-value=2e-07 Score=104.69 Aligned_cols=112 Identities=10% Similarity=0.031 Sum_probs=83.2
Q ss_pred CcEEEEEeCCCCccccccccccC-CCCCCEEEcc----CCccccc-----CCcccCCCCCCCEEEeecC--cccccCCcc
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQS-LTHIKSIILR----NNSFSGI-----IPEGFGELEELEVLDFGHN--NFSGPLPND 140 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~-l~~L~~l~L~----~N~l~g~-----ip~~~~~l~~L~~L~l~~N--~l~g~ip~~ 140 (664)
.+++.|+|+.+.+++..+..++. +++|+.|+|+ .|.+++. ++..+..+++|+.|+|+++ .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 47888888888888877777765 8888888885 6777763 4444667888888888743 466665555
Q ss_pred ccC-CcccceeecccCcccc-cCCccccCCCCCCEeeCCCCccccc
Q 006019 141 LGI-NHSLTILLLDNNDFVG-SLSPEIYKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 141 ~~~-~~~L~~l~l~~N~~~g-~iP~~~~~l~~L~~l~l~~n~l~g~ 184 (664)
++. +++|+.|+|++|++++ .++..+..+++|++|++++|.+++.
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 543 7788888888888876 4555667788888888888887654
No 406
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.05 E-value=1.4e-05 Score=83.91 Aligned_cols=139 Identities=13% Similarity=0.043 Sum_probs=88.0
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc--ccceEEEEecCCCceeEEEEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN--FVNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lV~E 453 (664)
+.++.|....+|+... ++..+++|..... ..+..|..+++.+.... +.++++++..... ..++|||
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g-~~~lv~e 114 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA----------DGFYKDRYVYRHFASAALPIPEVLDIGEFSES-LTYCISR 114 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC----------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSS-CEEEEEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch----------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCC-CeEEEEE
Confidence 5688999999999886 5677888766311 25888999999886543 5667777765421 5689999
Q ss_pred ecCCCChhhh------------------hcccCCC---------------CCCHHHH---------------------HH
Q 006019 454 YAPNGTLFEH------------------IHIKESE---------------HLDWGMR---------------------LR 479 (664)
Q Consensus 454 y~~~GsL~~~------------------l~~~~~~---------------~l~~~~~---------------------~~ 479 (664)
|+++..+.+. ||..... .-+|... ..
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9997665321 1111000 0012111 11
Q ss_pred HHHHHHHHHHHhhcC--CCCeEEeCcCCCCeEecCCCceEecccCchhh
Q 006019 480 IAMGMAYCLEHMHQL--NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE 526 (664)
Q Consensus 480 ia~~ia~gL~yLH~~--~~~ivHrDLk~~NILld~~~~~kl~DfGla~~ 526 (664)
....+....+++... .+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 112222333344221 25689999999999999887888999987643
No 407
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.03 E-value=8.8e-07 Score=99.40 Aligned_cols=104 Identities=20% Similarity=0.187 Sum_probs=67.1
Q ss_pred cEEEEEeCCCC-cc-ccccccccCCCCCCEEEccCCccccc----CCcccCCCCCCCEEEeecCccc----ccCCccccC
Q 006019 74 KVVNLNLKDLC-LE-GTLAPEIQSLTHIKSIILRNNSFSGI----IPEGFGELEELEVLDFGHNNFS----GPLPNDLGI 143 (664)
Q Consensus 74 ~v~~l~L~~~~-l~-g~ip~~~~~l~~L~~l~L~~N~l~g~----ip~~~~~l~~L~~L~l~~N~l~----g~ip~~~~~ 143 (664)
+++.|+|+++. ++ ..++....++++|+.|+|++|.+++. ++..+..+++|+.|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37778877665 21 11233334677788888888877655 4444556777777777777776 345555566
Q ss_pred CcccceeecccCcccccCCccccCCCCCCEeeCCC
Q 006019 144 NHSLTILLLDNNDFVGSLSPEIYKLQVLSESQVDE 178 (664)
Q Consensus 144 ~~~L~~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~ 178 (664)
+++|+.|+|++|.+.+ +|..+.++++|++|+++.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7777777777777765 556666666666666653
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.96 E-value=2.8e-05 Score=81.26 Aligned_cols=85 Identities=6% Similarity=-0.034 Sum_probs=54.0
Q ss_pred ccc-ccCCCeEEEEEEEC-------CCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCC---CcccceEEEEecCC
Q 006019 376 NVI-GSSPIGTVYKGTLS-------NGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNH---KNFVNLIGFCEEEE 444 (664)
Q Consensus 376 ~~i-G~G~~G~Vy~g~~~-------~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H---~niv~l~g~~~~~~ 444 (664)
+.| +.|....+|+.... ++..+++|........... ....+.+|+.+++.++. -.+.++++++.+..
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~--~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVF--PTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSS--SCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccC--chhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 456 88889999998764 2567777765432200000 01346778888887742 35677888876542
Q ss_pred C-ceeEEEEEecCCCChhh
Q 006019 445 P-FTRMMVFEYAPNGTLFE 462 (664)
Q Consensus 445 ~-~~~~lV~Ey~~~GsL~~ 462 (664)
. ...++||||+++..+.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 1 13479999999877653
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.74 E-value=2.7e-06 Score=95.45 Aligned_cols=111 Identities=7% Similarity=0.007 Sum_probs=77.6
Q ss_pred CcEEEEEeCCCCcccccccccc-CCCCCCEEEcc--C----Ccccc-----cCCcccCCCCCCCEEEeecCcccccCCcc
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQ-SLTHIKSIILR--N----NSFSG-----IIPEGFGELEELEVLDFGHNNFSGPLPND 140 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~-~l~~L~~l~L~--~----N~l~g-----~ip~~~~~l~~L~~L~l~~N~l~g~ip~~ 140 (664)
.++..|.+..+++++.....+. .+++|+.|+|+ + |.+++ .++..+..+++|+.|+|++ ++++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 4677788888888776666665 57888888888 3 55552 2223356677888888866 666655555
Q ss_pred ccC-CcccceeecccCcccccCCccc-cCCCCCCEeeCCCCccccc
Q 006019 141 LGI-NHSLTILLLDNNDFVGSLSPEI-YKLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 141 ~~~-~~~L~~l~l~~N~~~g~iP~~~-~~l~~L~~l~l~~n~l~g~ 184 (664)
++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++.
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 554 7788888888888876655555 5678888888888888544
No 410
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.69 E-value=8.5e-05 Score=76.66 Aligned_cols=85 Identities=12% Similarity=0.049 Sum_probs=44.6
Q ss_pred CCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccc-eeecccCcccccCCccccCCCCCCEe
Q 006019 96 LTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLT-ILLLDNNDFVGSLSPEIYKLQVLSES 174 (664)
Q Consensus 96 l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~-~l~l~~N~~~g~iP~~~~~l~~L~~l 174 (664)
+++|+.|+|++|++...-+..|.+|++|+.|+|++| ++---+..|.++.+|+ .+++.+ +++.--+..|.+|++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 555666666665555333334556666666666655 4422223355555665 666655 4442223445556666666
Q ss_pred eCCCCccc
Q 006019 175 QVDEGQLS 182 (664)
Q Consensus 175 ~l~~n~l~ 182 (664)
+++.|+++
T Consensus 303 ~l~~n~i~ 310 (329)
T 3sb4_A 303 LATGDKIT 310 (329)
T ss_dssp EECSSCCC
T ss_pred EeCCCccC
Confidence 66555554
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.67 E-value=1.1e-05 Score=76.11 Aligned_cols=97 Identities=19% Similarity=0.189 Sum_probs=78.3
Q ss_pred cccccccCCCCCCEEEccCC-ccccc----CCcccCCCCCCCEEEeecCccccc----CCccccCCcccceeecccCccc
Q 006019 88 TLAPEIQSLTHIKSIILRNN-SFSGI----IPEGFGELEELEVLDFGHNNFSGP----LPNDLGINHSLTILLLDNNDFV 158 (664)
Q Consensus 88 ~ip~~~~~l~~L~~l~L~~N-~l~g~----ip~~~~~l~~L~~L~l~~N~l~g~----ip~~~~~~~~L~~l~l~~N~~~ 158 (664)
.+...+...+.|+.|+|++| .+... +...+...++|++|+|++|++... +...+...++|++|+|++|.++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34556788999999999999 88743 556677789999999999998742 3344556688999999999997
Q ss_pred cc----CCccccCCCCCCEeeC--CCCccccc
Q 006019 159 GS----LSPEIYKLQVLSESQV--DEGQLSSA 184 (664)
Q Consensus 159 g~----iP~~~~~l~~L~~l~l--~~n~l~g~ 184 (664)
.. +...+...++|++|+| ++|.++..
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 54 5667888899999999 88999753
No 412
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.64 E-value=0.00013 Score=77.33 Aligned_cols=78 Identities=12% Similarity=0.082 Sum_probs=47.6
Q ss_pred cccccCCCeEEEEEEEC-CCcEEEEEEeeeccc---CCCchhHHHHHHHHHHHHhccCC--Cc-ccceEEEEecCCCcee
Q 006019 376 NVIGSSPIGTVYKGTLS-NGVEIAVASVSVASA---KDWPKNLEVQFRKKIDTLSKVNH--KN-FVNLIGFCEEEEPFTR 448 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~-~~~~vavk~~~~~~~---~~~~~~~~~~f~~E~~~l~~l~H--~n-iv~l~g~~~~~~~~~~ 448 (664)
+.||.|.++.||++... ++..++||....... ..+ ......+..|.++++.+.+ +. +.+++.+. .+ ..
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~-~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~--~~ 110 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESW-PLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE--MA 110 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------C-CCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT--TT
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCC-cCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC--cc
Confidence 57999999999999754 467889987643211 000 0112346778888887742 33 44566543 22 34
Q ss_pred EEEEEecCCC
Q 006019 449 MMVFEYAPNG 458 (664)
Q Consensus 449 ~lV~Ey~~~G 458 (664)
++||||+++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 7999999763
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.63 E-value=1.5e-05 Score=83.43 Aligned_cols=109 Identities=15% Similarity=0.130 Sum_probs=74.2
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccC--CCCCCCEEEeec--Cccccc-----CCccc--
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFG--ELEELEVLDFGH--NNFSGP-----LPNDL-- 141 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~--~l~~L~~L~l~~--N~l~g~-----ip~~~-- 141 (664)
.++..|+|+++. .-.+++ + .+++|+.|+|..+.++...-..+. .+++|+.|+|+. |+..|. +-..+
T Consensus 172 P~L~~L~L~g~~-~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTN-NLSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCB-TCBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCC-Cceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 589999998772 113444 3 378899999988887654444443 688999998863 332222 11122
Q ss_pred cCCcccceeecccCcccccCCcccc---CCCCCCEeeCCCCccccc
Q 006019 142 GINHSLTILLLDNNDFVGSLSPEIY---KLQVLSESQVDEGQLSSA 184 (664)
Q Consensus 142 ~~~~~L~~l~l~~N~~~g~iP~~~~---~l~~L~~l~l~~n~l~g~ 184 (664)
..+++|++|+|.+|.+....+..+. .+++|++|+|+.|.+++.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 2478899999999988765554444 477899999999988764
No 414
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.59 E-value=8.8e-06 Score=91.20 Aligned_cols=107 Identities=16% Similarity=0.142 Sum_probs=66.9
Q ss_pred CcEEEEEeCCCCcccccccccc-CCCCCCEEEccCC-ccccc-CCcccCCCCCCCEEEeecCcccccCCcccc----CCc
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQ-SLTHIKSIILRNN-SFSGI-IPEGFGELEELEVLDFGHNNFSGPLPNDLG----INH 145 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~-~l~~L~~l~L~~N-~l~g~-ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~----~~~ 145 (664)
.+++.|+|+++.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4677777777777766666654 5777777777777 44432 444445677777777777777664443333 456
Q ss_pred ccceeecccCc--ccc-cCCccccCCCCCCEeeCCCC
Q 006019 146 SLTILLLDNND--FVG-SLSPEIYKLQVLSESQVDEG 179 (664)
Q Consensus 146 ~L~~l~l~~N~--~~g-~iP~~~~~l~~L~~l~l~~n 179 (664)
+|+.|++++|. ++. .++.-+.++++|++|++++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 77777777775 221 11122345677777777777
No 415
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.56 E-value=0.00027 Score=72.97 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=27.2
Q ss_pred CCCeEEeCcCCCCeEecCCCceEecccCchh
Q 006019 495 NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN 525 (664)
Q Consensus 495 ~~~ivHrDLk~~NILld~~~~~kl~DfGla~ 525 (664)
.+.++|+|+++.|||++.+..+.|.||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 4569999999999999888899999998653
No 416
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.55 E-value=0.00023 Score=71.86 Aligned_cols=74 Identities=18% Similarity=0.261 Sum_probs=52.8
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCC---CcccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNH---KNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H---~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.+|.|..+.||+.++.+|+.+.+|+....... ....|..|++.|+.+.- --+.+.+++. . .++||
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~----~~lv~ 89 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPA-----LDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D----RTLAM 89 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-----CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T----TEEEE
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-----hhhHHHHHHHHHHHHHhhCCCCcceEEecc--C----ceEEE
Confidence 568999999999999999999999975432211 12358889999888742 2344555543 2 27999
Q ss_pred EecCCCCh
Q 006019 453 EYAPNGTL 460 (664)
Q Consensus 453 Ey~~~GsL 460 (664)
||++.+..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987765
No 417
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.42 E-value=0.0019 Score=65.84 Aligned_cols=135 Identities=14% Similarity=0.191 Sum_probs=90.2
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccC---CCcccceEEEEecCCCceeEEEE
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVN---HKNFVNLIGFCEEEEPFTRMMVF 452 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~~~lV~ 452 (664)
+.|+.|....+|+... ++..+++|..... ....|..|.+.|+.+. ...+.+.++++...+ ..++||
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--~~~lvm 110 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS--------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--HSFLLL 110 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG--------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--EEEEEE
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc--------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--ceEEEE
Confidence 4689999999999886 4567778876421 2456889999888874 356888898887655 679999
Q ss_pred EecCCCChhh-----------hhcccCC-C-------------------CCCHHHHH---HHHH----------------
Q 006019 453 EYAPNGTLFE-----------HIHIKES-E-------------------HLDWGMRL---RIAM---------------- 482 (664)
Q Consensus 453 Ey~~~GsL~~-----------~l~~~~~-~-------------------~l~~~~~~---~ia~---------------- 482 (664)
||+++..+.. .||.... . .-+|.... ++..
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 9999887621 2332211 0 12564321 1111
Q ss_pred HHH-HHHHHh--hcCCCCeEEeCcCCCCeEecCCCceEecccC
Q 006019 483 GMA-YCLEHM--HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLS 522 (664)
Q Consensus 483 ~ia-~gL~yL--H~~~~~ivHrDLk~~NILld~~~~~kl~DfG 522 (664)
.+. .....| |+..|.++|+|+.+.|++++.++ +.|.||.
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 122334 23456799999999999999887 8899984
No 418
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.21 E-value=0.00012 Score=76.47 Aligned_cols=110 Identities=13% Similarity=0.138 Sum_probs=73.1
Q ss_pred CcEEEEEeCCCCc---------cccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCcccc-
Q 006019 73 GKVVNLNLKDLCL---------EGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLG- 142 (664)
Q Consensus 73 ~~v~~l~L~~~~l---------~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~- 142 (664)
.++..|.+.++.+ .+.+.+.+..+++|+.|+|++|.- -.+|. +. +++|+.|+|..+.++...-..+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~-l~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN-LSIGK-KP-RPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT-CBCCS-CB-CTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC-ceecc-cc-CCCCcEEEEecCCCChHHHHHHHH
Confidence 4778888865533 234556677889999999988731 13444 43 78999999998887654434444
Q ss_pred -CCcccceeeccc--Cccccc-----CCccc--cCCCCCCEeeCCCCcccccc
Q 006019 143 -INHSLTILLLDN--NDFVGS-----LSPEI--YKLQVLSESQVDEGQLSSAA 185 (664)
Q Consensus 143 -~~~~L~~l~l~~--N~~~g~-----iP~~~--~~l~~L~~l~l~~n~l~g~~ 185 (664)
.+++|+.|+|+. |...|. +.+.+ ..+++|++|+|.+|.++...
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~ 268 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVV 268 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHH
Confidence 688999999863 332222 11222 25789999999999887543
No 419
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.17 E-value=0.00051 Score=70.72 Aligned_cols=100 Identities=11% Similarity=-0.010 Sum_probs=43.4
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCC-EEEeecCcccccCCccccCCcccceeec
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELE-VLDFGHNNFSGPLPNDLGINHSLTILLL 152 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~-~L~l~~N~l~g~ip~~~~~~~~L~~l~l 152 (664)
+++.|+|++|+++.--+..+.++++|+.|+|.+| +...-+..|.+|++|+ .++|++ +++---+..|.+|++|+.|++
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEe
Confidence 3444455544444211223444555555555544 3322223344555554 555544 333222234444555555555
Q ss_pred ccCcccccCCccccCCCCCCEee
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQ 175 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~ 175 (664)
+.|+++.--+..|.++++|+.++
T Consensus 305 ~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 305 TGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCccCccchhhhcCCcchhhhc
Confidence 55544432233444444444443
No 420
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.96 E-value=0.002 Score=65.33 Aligned_cols=70 Identities=9% Similarity=0.063 Sum_probs=41.4
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcc-cceEEEEecCCCceeEEEEEe
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNF-VNLIGFCEEEEPFTRMMVFEY 454 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~lV~Ey 454 (664)
+.|+.|....+|+. ..+.+|+........ .+..+|+.+++.+....+ .++++++.+ ..++|+||
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~------~~r~~E~~~l~~l~~~g~~P~~~~~~~~----~~~~v~e~ 88 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY------INRANEAVAAREAAKAGVSPEVLHVDPA----TGVMVTRY 88 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----C------CCHHHHHHHHHHHHHTTSSCCEEEECTT----TCCEEEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccce------eCHHHHHHHHHHHHHcCCCCceEEEECC----CCEEEEee
Confidence 56888999999998 446777664321111 123457777766643233 466665432 23689999
Q ss_pred c-CCCCh
Q 006019 455 A-PNGTL 460 (664)
Q Consensus 455 ~-~~GsL 460 (664)
+ ++-.+
T Consensus 89 i~~g~~l 95 (301)
T 3dxq_A 89 IAGAQTM 95 (301)
T ss_dssp CTTCEEC
T ss_pred cCCCccC
Confidence 9 55444
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.66 E-value=0.0035 Score=66.84 Aligned_cols=70 Identities=14% Similarity=0.123 Sum_probs=43.2
Q ss_pred CCCeEEeCcCCCCeEecCCCceEecccCchhhhhhhh----------hhcccccccCCC---CCCcCCcchhhHHHHHHH
Q 006019 495 NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE----------MAATSKKLSSAP---SASLESNVYNFGVLLFEM 561 (664)
Q Consensus 495 ~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~~----------~~~~~pe~~~~~---~~s~ksDVySfGvvl~El 561 (664)
.+.++|+|+++.|||++.+. ++|.||+.+....... ..+..+++.... ......++++....+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 44599999999999999876 9999998765432110 111122222111 112234556788888888
Q ss_pred HhCC
Q 006019 562 VTGR 565 (664)
Q Consensus 562 ~tG~ 565 (664)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 422
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.63 E-value=0.0055 Score=62.97 Aligned_cols=33 Identities=6% Similarity=-0.044 Sum_probs=27.2
Q ss_pred CCCeEEeCcCCCCeEecCC----CceEecccCchhhh
Q 006019 495 NPPIAHNYLNSSAVHLTED----YAAKLSDLSFWNEI 527 (664)
Q Consensus 495 ~~~ivHrDLk~~NILld~~----~~~kl~DfGla~~~ 527 (664)
.+.++|||+.+.|||++.+ ..+.|.||+.+...
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 3459999999999999875 68899999876543
No 423
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.43 E-value=0.011 Score=60.26 Aligned_cols=140 Identities=11% Similarity=0.063 Sum_probs=76.4
Q ss_pred cccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc--ccceEEEE------ecCCCce
Q 006019 376 NVIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN--FVNLIGFC------EEEEPFT 447 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~------~~~~~~~ 447 (664)
+.|+.|....+|+....+| .+++|....... ..++..|+.++..++... +.+++... ...+ .
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-------~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g--~ 97 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-------KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSG--R 97 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC----------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETT--E
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCC-------HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECC--E
Confidence 3467788899999987666 566777653211 124556777776664222 23333211 1112 4
Q ss_pred eEEEEEecCCCChhh--------------hhccc----CCC------CCCHHHHHH------------HHHHHHHHHHHh
Q 006019 448 RMMVFEYAPNGTLFE--------------HIHIK----ESE------HLDWGMRLR------------IAMGMAYCLEHM 491 (664)
Q Consensus 448 ~~lV~Ey~~~GsL~~--------------~l~~~----~~~------~l~~~~~~~------------ia~~ia~gL~yL 491 (664)
.+++++|+++..+.. .+|.. ... ...|..... +...+...++++
T Consensus 98 ~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l 177 (322)
T 2ppq_A 98 PAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYL 177 (322)
T ss_dssp EEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 589999999865421 12211 000 012433111 111244455555
Q ss_pred hc-----CCCCeEEeCcCCCCeEecCCCceEecccCchh
Q 006019 492 HQ-----LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN 525 (664)
Q Consensus 492 H~-----~~~~ivHrDLk~~NILld~~~~~kl~DfGla~ 525 (664)
++ ..+.++|+|+.+.|||++++..+.|.||+.+.
T Consensus 178 ~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 178 AAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp HHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 42 12359999999999999987667899998654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.30 E-value=0.0016 Score=60.09 Aligned_cols=82 Identities=10% Similarity=0.013 Sum_probs=42.3
Q ss_pred CCCEEEccCCcccccCCcccCCCCCCCEEEeecCc-ccccCCccccCC----cccceeecccCc-ccccCCccccCCCCC
Q 006019 98 HIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNN-FSGPLPNDLGIN----HSLTILLLDNND-FVGSLSPEIYKLQVL 171 (664)
Q Consensus 98 ~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~-l~g~ip~~~~~~----~~L~~l~l~~N~-~~g~iP~~~~~l~~L 171 (664)
.|+.|||+++.++..--..+..|++|+.|+|+++. ++..-=..++.+ ++|+.|+|+++. ++-.==..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555543322334556666666666653 443211223332 356667766653 432111235567777
Q ss_pred CEeeCCCC
Q 006019 172 SESQVDEG 179 (664)
Q Consensus 172 ~~l~l~~n 179 (664)
++|++++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 77777765
No 425
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.23 E-value=0.013 Score=62.58 Aligned_cols=72 Identities=14% Similarity=0.169 Sum_probs=47.8
Q ss_pred cccccCCCeEEEEEEECC--------CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcc-cceEEEEecCCCc
Q 006019 376 NVIGSSPIGTVYKGTLSN--------GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNF-VNLIGFCEEEEPF 446 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~--------~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~ 446 (664)
+.|+.|....||+....+ +..+.+|+.... . ....+..|..+++.+...++ .++++++. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~-- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---E----TESHLVAESVIFTLLSERHLGPKLYGIFS--G-- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---C----CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---C----cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--
Confidence 468888899999998763 467778776321 1 11345578888888753334 56777653 2
Q ss_pred eeEEEEEecCCCCh
Q 006019 447 TRMMVFEYAPNGTL 460 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL 460 (664)
.+|+||+++..|
T Consensus 148 --g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 --GRLEEYIPSRPL 159 (429)
T ss_dssp --EEEECCCCEEEC
T ss_pred --CEEEEEeCCccc
Confidence 389999986444
No 426
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.19 E-value=0.028 Score=60.42 Aligned_cols=73 Identities=10% Similarity=0.058 Sum_probs=46.5
Q ss_pred cccccCCCeEEEEEEECC-CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCcc-cceEEEEecCCCceeEEEEE
Q 006019 376 NVIGSSPIGTVYKGTLSN-GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNF-VNLIGFCEEEEPFTRMMVFE 453 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~-~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~~~lV~E 453 (664)
+.|+.|-...+|+....+ +..+.+|+........ .+-..|..++..+...++ .++++++. + .+|||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~------idR~~E~~vl~~L~~~gl~P~ll~~~~--~----G~v~e 181 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI------INREREKKISCILYNKNIAKKIYVFFT--N----GRIEE 181 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC------SCHHHHHHHHHHHTTSSSBCCEEEEET--T----EEEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh------cCHHHHHHHHHHHHhcCCCCCEEEEeC--C----eEEEE
Confidence 568888899999999865 4677787653221111 112578888888865555 46777762 2 25999
Q ss_pred ecCCCCh
Q 006019 454 YAPNGTL 460 (664)
Q Consensus 454 y~~~GsL 460 (664)
|+++..|
T Consensus 182 ~I~G~~l 188 (458)
T 2qg7_A 182 FMDGYAL 188 (458)
T ss_dssp CCCSEEC
T ss_pred eeCCccC
Confidence 9987554
No 427
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.13 E-value=0.011 Score=62.65 Aligned_cols=100 Identities=12% Similarity=0.132 Sum_probs=52.6
Q ss_pred cEEEEEeCCCCccccccc-cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccc----cCC-ccccCCccc
Q 006019 74 KVVNLNLKDLCLEGTLAP-EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSG----PLP-NDLGINHSL 147 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~-~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g----~ip-~~~~~~~~L 147 (664)
++..++|.++ +. .|+. ++.+ .+|+.+.| .|++.-.-+..|.+|++|+.+++.+|.+.. .|+ ..|.+|++|
T Consensus 227 ~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 227 QLKTIEIPEN-VS-TIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TCCCEECCTT-CC-EECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCEEecCCC-cc-Ccccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 5666666543 33 2332 2333 56666666 334443334556666667777666665541 122 345566666
Q ss_pred ceeecccCcccccCC-ccccCCCCCCEeeCCCC
Q 006019 148 TILLLDNNDFVGSLS-PEIYKLQVLSESQVDEG 179 (664)
Q Consensus 148 ~~l~l~~N~~~g~iP-~~~~~l~~L~~l~l~~n 179 (664)
+.++|.+ +++ .|+ ..|.+|++|+.++|..|
T Consensus 303 ~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 303 ARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp CEECCCT-TCC-EECTTTTTTCCSCCEEEECTT
T ss_pred CeEEeCC-ceE-EEhhhhhcCCCCccEEEECcc
Confidence 6666663 344 333 33555666666666443
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.05 E-value=0.0087 Score=52.31 Aligned_cols=14 Identities=14% Similarity=0.271 Sum_probs=5.7
Q ss_pred CCCCCEeeCCCCcc
Q 006019 168 LQVLSESQVDEGQL 181 (664)
Q Consensus 168 l~~L~~l~l~~n~l 181 (664)
+++|+.|+|++|.+
T Consensus 54 l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 54 LPALRTAHLGANPW 67 (130)
T ss_dssp CTTCCEEECCSSCC
T ss_pred ccccCEEEecCCCe
Confidence 33344444444433
No 429
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.03 E-value=0.021 Score=59.73 Aligned_cols=139 Identities=12% Similarity=0.126 Sum_probs=78.7
Q ss_pred cccccCCCeEEEEEEECC--------CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc-ccceEEEEecCCCc
Q 006019 376 NVIGSSPIGTVYKGTLSN--------GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN-FVNLIGFCEEEEPF 446 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~--------~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~ 446 (664)
+.+..|-...+|+....+ +..+.+|+.... . .....+.+|.++++.+.-.+ ..++++++.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~-----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~---- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-L-----QGVDSLVLESVMFAILAERSLGPQLYGVFPE---- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-c-----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----
Confidence 457778888999998752 467777764211 1 11345668888888774222 3567766532
Q ss_pred eeEEEEEecCCCChhh-----------------hhcccC---CCCCC--HHHHHHHHHHHH-------------------
Q 006019 447 TRMMVFEYAPNGTLFE-----------------HIHIKE---SEHLD--WGMRLRIAMGMA------------------- 485 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL~~-----------------~l~~~~---~~~l~--~~~~~~ia~~ia------------------- 485 (664)
.+||||+++..|.. .+|... ..... |.+..++..++.
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 28999999866531 122111 11222 333333332221
Q ss_pred HHHHH----hhc--CCCCeEEeCcCCCCeEecCC----CceEecccCchhh
Q 006019 486 YCLEH----MHQ--LNPPIAHNYLNSSAVHLTED----YAAKLSDLSFWNE 526 (664)
Q Consensus 486 ~gL~y----LH~--~~~~ivHrDLk~~NILld~~----~~~kl~DfGla~~ 526 (664)
..++. |.. ....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 12233 322 22359999999999999987 7899999987543
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.00 E-value=0.0027 Score=58.49 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=63.3
Q ss_pred CcEEEEEeCCCCccccccccccCCCCCCEEEccCCc-ccccCCcccCCC----CCCCEEEeecCc-ccccCCccccCCcc
Q 006019 73 GKVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNS-FSGIIPEGFGEL----EELEVLDFGHNN-FSGPLPNDLGINHS 146 (664)
Q Consensus 73 ~~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~-l~g~ip~~~~~l----~~L~~L~l~~N~-l~g~ip~~~~~~~~ 146 (664)
-+++.|||+++.++..=-..+..+++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. ++..==..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 379999999998764333457899999999999985 775433445554 479999999974 66432235678999
Q ss_pred cceeecccCc
Q 006019 147 LTILLLDNND 156 (664)
Q Consensus 147 L~~l~l~~N~ 156 (664)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999874
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.98 E-value=0.026 Score=57.52 Aligned_cols=138 Identities=9% Similarity=0.026 Sum_probs=77.3
Q ss_pred ccccCCCeEEEEEEECCCcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCC--cccceEEE-----EecCCCceeE
Q 006019 377 VIGSSPIGTVYKGTLSNGVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHK--NFVNLIGF-----CEEEEPFTRM 449 (664)
Q Consensus 377 ~iG~G~~G~Vy~g~~~~~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~-----~~~~~~~~~~ 449 (664)
.++ |....||+....+|..+++|....... ....+..|..++..++.. .+++++.. ....+ ..+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~------~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g--~~~ 103 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW------TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG--FYF 103 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS------CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT--EEE
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC------CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC--EEE
Confidence 356 778899998877777788888752211 124566777777776422 24444443 11122 457
Q ss_pred EEEEecCCCChhh--------------hhccc----C---CCCCCHHHH----HHH---------------HHHHHHHHH
Q 006019 450 MVFEYAPNGTLFE--------------HIHIK----E---SEHLDWGMR----LRI---------------AMGMAYCLE 489 (664)
Q Consensus 450 lV~Ey~~~GsL~~--------------~l~~~----~---~~~l~~~~~----~~i---------------a~~ia~gL~ 489 (664)
+||||+++..+.. .+|.. . ....++... ..+ ...+.+.++
T Consensus 104 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 183 (328)
T 1zyl_A 104 AVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIA 183 (328)
T ss_dssp EEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHH
Confidence 8999998755421 12211 0 112233211 001 111112233
Q ss_pred Hhh----c-CCCCeEEeCcCCCCeEecCCCceEecccCchh
Q 006019 490 HMH----Q-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN 525 (664)
Q Consensus 490 yLH----~-~~~~ivHrDLk~~NILld~~~~~kl~DfGla~ 525 (664)
.+. + ..+.++|+|+++.|||++ + .+.|.||+.+.
T Consensus 184 ~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 184 AVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 332 1 233489999999999999 4 89999998654
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.82 E-value=0.012 Score=51.39 Aligned_cols=57 Identities=18% Similarity=0.190 Sum_probs=46.7
Q ss_pred CEEEccCCccc-ccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccCccc
Q 006019 100 KSIILRNNSFS-GIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFV 158 (664)
Q Consensus 100 ~~l~L~~N~l~-g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~ 158 (664)
..++.+++.++ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.|.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999997 57886654 47999999999999544445778999999999999885
No 433
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.77 E-value=0.017 Score=60.22 Aligned_cols=73 Identities=8% Similarity=0.028 Sum_probs=41.8
Q ss_pred cccccCCCeEEEEEEECC---------CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc-ccceEEEEecCCC
Q 006019 376 NVIGSSPIGTVYKGTLSN---------GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN-FVNLIGFCEEEEP 445 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~---------~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~ 445 (664)
..++.|....+|+....+ +..+.+|+....... ..+...|.++++.+...+ ..++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~------~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~- 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE------LYNTISEFEVYKTMSKYKIAPQLLNTF--NG- 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG------TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT-
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc------eecHHHHHHHHHHHHhcCCCCceEEec--CC-
Confidence 457888889999998754 256777765322110 112356777777775333 34666544 22
Q ss_pred ceeEEEEEecCCCCh
Q 006019 446 FTRMMVFEYAPNGTL 460 (664)
Q Consensus 446 ~~~~lV~Ey~~~GsL 460 (664)
.+||||+++..+
T Consensus 110 ---~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 ---GRIEEWLYGDPL 121 (369)
T ss_dssp ---EEEEECCCSEEC
T ss_pred ---cEEEEEecCCcC
Confidence 689999987544
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.57 E-value=0.0033 Score=59.09 Aligned_cols=111 Identities=17% Similarity=0.189 Sum_probs=73.1
Q ss_pred CCcEEEEEeCCC-Cccc----cccccccCCCCCCEEEccCCccccc----CCcccCCCCCCCEEEeecCccccc----CC
Q 006019 72 DGKVVNLNLKDL-CLEG----TLAPEIQSLTHIKSIILRNNSFSGI----IPEGFGELEELEVLDFGHNNFSGP----LP 138 (664)
Q Consensus 72 ~~~v~~l~L~~~-~l~g----~ip~~~~~l~~L~~l~L~~N~l~g~----ip~~~~~l~~L~~L~l~~N~l~g~----ip 138 (664)
+..++.|+|+++ ++.. .+...+..=+.|+.|+|++|.+... |-..+..=+.|+.|+|+.|+++.. |-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 567888999875 6652 2445566778899999999988743 233344456789999999988743 22
Q ss_pred ccccCCcccceeecccC---cccc----cCCccccCCCCCCEeeCCCCccc
Q 006019 139 NDLGINHSLTILLLDNN---DFVG----SLSPEIYKLQVLSESQVDEGQLS 182 (664)
Q Consensus 139 ~~~~~~~~L~~l~l~~N---~~~g----~iP~~~~~l~~L~~l~l~~n~l~ 182 (664)
..+..-+.|+.|+|++| .+.. .|-..+..-+.|+.|+++.|...
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 23444556888888765 2322 24444556678888888876654
No 435
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=95.16 E-value=0.044 Score=57.86 Aligned_cols=106 Identities=12% Similarity=0.084 Sum_probs=79.3
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCccc-----ccCCcccCCCCCCCEEEeecCcccccCCccccCCcccc
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFS-----GIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLT 148 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~-----g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~ 148 (664)
.++.+.|. +++.---...+.++++|+.++|.+|.+. -.-+..|.+|++|+.++|. |+++---...|.+|++|+
T Consensus 249 ~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 249 GITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVT 326 (401)
T ss_dssp CCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCC
T ss_pred CccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCcc
Confidence 67788884 4455322456889999999999998875 2334678999999999999 456633335678899999
Q ss_pred eeecccCcccccCCccccCCCCCCEeeCCCCcccc
Q 006019 149 ILLLDNNDFVGSLSPEIYKLQVLSESQVDEGQLSS 183 (664)
Q Consensus 149 ~l~l~~N~~~g~iP~~~~~l~~L~~l~l~~n~l~g 183 (664)
.++|..| ++--=+..|.++ +|+.+++++|.+..
T Consensus 327 ~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 327 QLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp EEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred EEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 9999766 553334467788 99999999997754
No 436
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.31 E-value=0.21 Score=51.22 Aligned_cols=31 Identities=10% Similarity=0.009 Sum_probs=27.1
Q ss_pred CCeEEeCcCCCCeEecCCCceEecccCchhh
Q 006019 496 PPIAHNYLNSSAVHLTEDYAAKLSDLSFWNE 526 (664)
Q Consensus 496 ~~ivHrDLk~~NILld~~~~~kl~DfGla~~ 526 (664)
+.++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4599999999999999888899999986554
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.91 E-value=0.022 Score=53.41 Aligned_cols=91 Identities=18% Similarity=0.168 Sum_probs=66.3
Q ss_pred ccccccCCCCCCEEEccCC-ccccc----CCcccCCCCCCCEEEeecCccccc----CCccccCCcccceeecccCcccc
Q 006019 89 LAPEIQSLTHIKSIILRNN-SFSGI----IPEGFGELEELEVLDFGHNNFSGP----LPNDLGINHSLTILLLDNNDFVG 159 (664)
Q Consensus 89 ip~~~~~l~~L~~l~L~~N-~l~g~----ip~~~~~l~~L~~L~l~~N~l~g~----ip~~~~~~~~L~~l~l~~N~~~g 159 (664)
+...+.+-+.|+.|+|++| .+... +-..+..-+.|+.|+|++|++... |-..+..-+.|+.|+|++|.+..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3344566789999999986 77532 445566678999999999999743 22334456789999999999974
Q ss_pred c----CCccccCCCCCCEeeCCCC
Q 006019 160 S----LSPEIYKLQVLSESQVDEG 179 (664)
Q Consensus 160 ~----iP~~~~~l~~L~~l~l~~n 179 (664)
. |-..+..-+.|++|+|++|
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHHHhhCCceeEEECCCC
Confidence 3 3444556677999999865
No 438
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.98 E-value=0.42 Score=50.05 Aligned_cols=144 Identities=12% Similarity=0.082 Sum_probs=79.2
Q ss_pred cccccCCCeEEEEEEECC--------CcEEEEEEeeecccC---------CCchh----HHHHHHHHHHHHhccC-CCcc
Q 006019 376 NVIGSSPIGTVYKGTLSN--------GVEIAVASVSVASAK---------DWPKN----LEVQFRKKIDTLSKVN-HKNF 433 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~--------~~~vavk~~~~~~~~---------~~~~~----~~~~f~~E~~~l~~l~-H~ni 433 (664)
+.|..|-...+|+...++ +..+.+++.-..... ..... .......|..+++.+. |--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 457678888999988754 256777665332110 00000 0012335888888775 3334
Q ss_pred cceEEEEecCCCceeEEEEEecCCCChhh--h---------------hcccC---CCCCC--HHHHHHHHHHHH------
Q 006019 434 VNLIGFCEEEEPFTRMMVFEYAPNGTLFE--H---------------IHIKE---SEHLD--WGMRLRIAMGMA------ 485 (664)
Q Consensus 434 v~l~g~~~~~~~~~~~lV~Ey~~~GsL~~--~---------------l~~~~---~~~l~--~~~~~~ia~~ia------ 485 (664)
.++++++. + .+|+||+++-.|.. + +|... ..... |.+..++...+.
T Consensus 138 Pkl~~~~~--~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~ 211 (401)
T 3f2s_A 138 PKLYGIFP--Q----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTE 211 (401)
T ss_dssp CCEEEEET--T----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCS
T ss_pred CeEEEEeC--C----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcc
Confidence 56777653 2 28999999755521 1 12111 11223 223222222211
Q ss_pred ----------------HHH----HHhhc--CCCCeEEeCcCCCCeEecCC------CceEecccCchh
Q 006019 486 ----------------YCL----EHMHQ--LNPPIAHNYLNSSAVHLTED------YAAKLSDLSFWN 525 (664)
Q Consensus 486 ----------------~gL----~yLH~--~~~~ivHrDLk~~NILld~~------~~~kl~DfGla~ 525 (664)
.-+ .+|.. ....++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 212 ~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 212 ESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 23322 22358999999999999887 789999998654
No 439
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.87 E-value=0.74 Score=48.30 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=24.3
Q ss_pred eEEeCcCCCCeEe------cCCCceEecccCchhh
Q 006019 498 IAHNYLNSSAVHL------TEDYAAKLSDLSFWNE 526 (664)
Q Consensus 498 ivHrDLk~~NILl------d~~~~~kl~DfGla~~ 526 (664)
++|+|+.+.|||+ +++..++++||-++..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999987653
No 440
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=90.22 E-value=0.51 Score=49.28 Aligned_cols=101 Identities=7% Similarity=0.158 Sum_probs=71.4
Q ss_pred cEEEEEeCCCCcccccc-ccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCC-ccccCCcccceee
Q 006019 74 KVVNLNLKDLCLEGTLA-PEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLP-NDLGINHSLTILL 151 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip-~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~~~~L~~l~ 151 (664)
.++.+.+.++-. .|. ..+.+++.|+.+.+. +.+.-.-...|.+|.+|+.++|..| ++ .|. ..|.+|.+|+.+.
T Consensus 266 ~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 266 YLASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIA 340 (394)
T ss_dssp SCCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEE
T ss_pred cccEEecccccc--eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEE
Confidence 456666654432 122 357789999999996 4455333456889999999999865 44 343 4678899999999
Q ss_pred cccCcccccCCc-cccCCCCCCEeeCCCCcc
Q 006019 152 LDNNDFVGSLSP-EIYKLQVLSESQVDEGQL 181 (664)
Q Consensus 152 l~~N~~~g~iP~-~~~~l~~L~~l~l~~n~l 181 (664)
|..+ ++ .|.. .|.++++|+.+++.+|..
T Consensus 341 ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 341 IPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp ECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred ECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 9765 44 5554 577999999999988754
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=89.88 E-value=0.85 Score=47.13 Aligned_cols=102 Identities=13% Similarity=0.102 Sum_probs=61.3
Q ss_pred cEEEEEeCCCCccccccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCC-ccccCCcccceeec
Q 006019 74 KVVNLNLKDLCLEGTLAPEIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLP-NDLGINHSLTILLL 152 (664)
Q Consensus 74 ~v~~l~L~~~~l~g~ip~~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~~~~L~~l~l 152 (664)
.+..+.+..+ +.-.-...+.++..|+.+.+..+ +.-.-...|.++.+|+.+.+..+ +. .++ ..+.++.+|+.+.+
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccc
Confidence 3445555432 22112234667778888887665 44223445677778888877654 33 233 34667788888888
Q ss_pred ccCcccccCCccccCCCCCCEeeCCCC
Q 006019 153 DNNDFVGSLSPEIYKLQVLSESQVDEG 179 (664)
Q Consensus 153 ~~N~~~g~iP~~~~~l~~L~~l~l~~n 179 (664)
.+|.++--=...|.++.+|+.+.|..+
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc
Confidence 777766222345667788888887644
No 442
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=89.83 E-value=0.64 Score=43.93 Aligned_cols=97 Identities=12% Similarity=0.186 Sum_probs=62.2
Q ss_pred ChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhhhhhcccc
Q 006019 459 TLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHM-HQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMAATSK 537 (664)
Q Consensus 459 sL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yL-H~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~~~~~~~p 537 (664)
+|.+.|.. ...+++..+...++.|.+.+|.-+ +...+ ..+=..+..|++..+|.+...+ ..+. .......+|
T Consensus 34 SL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~~~~~~~p 106 (229)
T 2yle_A 34 SLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---AGEPPPVAG 106 (229)
T ss_dssp EHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---ccccCCCCh
Confidence 67788763 457899999999999999988766 22221 1222356899999999998875 2211 111122344
Q ss_pred cccCCCCCCcCCcchhhHHHHHHHHh
Q 006019 538 KLSSAPSASLESNVYNFGVLLFEMVT 563 (664)
Q Consensus 538 e~~~~~~~s~ksDVySfGvvl~El~t 563 (664)
+... ...+.+.=|||+|+++|.-+-
T Consensus 107 e~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 107 KLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred hhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 4432 344678889999999999886
No 443
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=89.07 E-value=1.1 Score=47.16 Aligned_cols=73 Identities=16% Similarity=0.101 Sum_probs=45.5
Q ss_pred cccccCCCeEEEEEEECC--------CcEEEEEEeeecccCCCchhHHHHHHHHHHHHhccCCCc-ccceEEEEecCCCc
Q 006019 376 NVIGSSPIGTVYKGTLSN--------GVEIAVASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKN-FVNLIGFCEEEEPF 446 (664)
Q Consensus 376 ~~iG~G~~G~Vy~g~~~~--------~~~vavk~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~ 446 (664)
+.+..|-...+|+....+ +..+.+|+........ .+-.+|..+++.+.-.+ ..++++.+ .+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~------idR~~E~~~l~~L~~~gi~P~l~~~~--~~-- 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF------YDSKVELDVFRYLSNINIAPNIIADF--PE-- 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC------CCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh------cCHHHHHHHHHHHHhcCCCCCEEEEc--CC--
Confidence 457778889999998763 5677777753321111 12346777777764223 34566543 22
Q ss_pred eeEEEEEecCCCCh
Q 006019 447 TRMMVFEYAPNGTL 460 (664)
Q Consensus 447 ~~~lV~Ey~~~GsL 460 (664)
++|+||+++..|
T Consensus 146 --~~I~efI~G~~l 157 (424)
T 3mes_A 146 --GRIEEFIDGEPL 157 (424)
T ss_dssp --EEEEECCCSEEC
T ss_pred --CEEEEEeCCccC
Confidence 689999998664
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=88.09 E-value=1.2 Score=46.49 Aligned_cols=83 Identities=14% Similarity=0.191 Sum_probs=62.3
Q ss_pred cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCC-ccccCCcccceeecccCcccccCC-ccccCCC
Q 006019 92 EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLP-NDLGINHSLTILLLDNNDFVGSLS-PEIYKLQ 169 (664)
Q Consensus 92 ~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~~~~L~~l~l~~N~~~g~iP-~~~~~l~ 169 (664)
++.+++.|+.+.+.++-.. .-...|.++++|+.+.+. +.++ .|+ ..|.++.+|+.++|..| ++ .|. ..|.++.
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~ 334 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCE 334 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCT
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCC
Confidence 5678899999999766543 234568899999999996 4455 344 45778999999999865 44 343 4577899
Q ss_pred CCCEeeCCCC
Q 006019 170 VLSESQVDEG 179 (664)
Q Consensus 170 ~L~~l~l~~n 179 (664)
+|+.+.+..+
T Consensus 335 ~L~~i~ip~s 344 (394)
T 4gt6_A 335 QLERIAIPSS 344 (394)
T ss_dssp TCCEEEECTT
T ss_pred CCCEEEECcc
Confidence 9999999754
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=87.51 E-value=0.82 Score=47.65 Aligned_cols=81 Identities=11% Similarity=0.030 Sum_probs=48.3
Q ss_pred cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCC-ccccCCcccceeecccCcccccCC-ccccCCC
Q 006019 92 EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLP-NDLGINHSLTILLLDNNDFVGSLS-PEIYKLQ 169 (664)
Q Consensus 92 ~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~~~~L~~l~l~~N~~~g~iP-~~~~~l~ 169 (664)
.+..+..|+.+.+..+.+. ...+..+.+|+.+.+..+ ++ .|+ ..|.++.+|+.++|.++ ++ .|+ ..|.+++
T Consensus 271 ~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~ 343 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCT 343 (394)
T ss_dssp TTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCT
T ss_pred ccccccccceeccCceeec---cccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCC
Confidence 4556677777766655432 234566777777777654 33 233 34566777777777644 33 343 3456777
Q ss_pred CCCEeeCCCC
Q 006019 170 VLSESQVDEG 179 (664)
Q Consensus 170 ~L~~l~l~~n 179 (664)
+|+.+++..|
T Consensus 344 ~L~~i~lp~~ 353 (394)
T 4fs7_A 344 SLSNINFPLS 353 (394)
T ss_dssp TCCEECCCTT
T ss_pred CCCEEEECcc
Confidence 7777777655
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=87.31 E-value=0.82 Score=47.69 Aligned_cols=83 Identities=11% Similarity=0.073 Sum_probs=62.8
Q ss_pred cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCC-ccccCCcccceeecccCcccccCC-ccccCCC
Q 006019 92 EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLP-NDLGINHSLTILLLDNNDFVGSLS-PEIYKLQ 169 (664)
Q Consensus 92 ~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip-~~~~~~~~L~~l~l~~N~~~g~iP-~~~~~l~ 169 (664)
.+..+.+|+.+.+.++ +.-.-...|.+|++|+.++|..+ ++ .|+ ..|.+|.+|+.+++..| ++ .|+ ..|.++.
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~ 366 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCI 366 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCT
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCC
Confidence 4678899999999765 55333456889999999999754 55 443 46788999999999877 55 444 4577999
Q ss_pred CCCEeeCCCC
Q 006019 170 VLSESQVDEG 179 (664)
Q Consensus 170 ~L~~l~l~~n 179 (664)
+|+.+++..|
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 9999998754
No 447
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.23 E-value=0.1 Score=56.04 Aligned_cols=63 Identities=6% Similarity=0.061 Sum_probs=18.3
Q ss_pred hhcccccCCCeEEEEEEECC-CcEEEE------EEeeecccCCCchhHHHHHHHHHHHHhccCCCcccceEEEEec
Q 006019 374 FSNVIGSSPIGTVYKGTLSN-GVEIAV------ASVSVASAKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEE 442 (664)
Q Consensus 374 ~~~~iG~G~~G~Vy~g~~~~-~~~vav------k~~~~~~~~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 442 (664)
+.+.|| ||.||+|.+.. ..+||| |...... ........|.+|..+++..+|+|+++.++|...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~---~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG---VSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC--------------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCcccccccc---ccccccccccccccccccccccccCCCcceEEe
Confidence 345676 99999999864 357777 5443211 112334578899999999999999999988754
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=84.00 E-value=0.29 Score=33.20 Aligned_cols=27 Identities=33% Similarity=0.469 Sum_probs=13.1
Q ss_pred EEEehHHHHHHHHH--HHHHhhheeeccc
Q 006019 311 AILGGVIGGAILLV--ATVGIYLCRCNKV 337 (664)
Q Consensus 311 ~i~~~~~~~~~~~~--~~~~~~~~~~~~~ 337 (664)
+|.+++++++++++ +++.++++|+++.
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 45667776655542 2223444444443
No 449
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=82.21 E-value=3.3 Score=42.54 Aligned_cols=87 Identities=11% Similarity=0.074 Sum_probs=61.7
Q ss_pred cccCCCCCCEEEccCCcccccCCcccCCCCCCCEEEeecCcccccCCccccCCcccceeecccCcccccCCc-cccCCCC
Q 006019 92 EIQSLTHIKSIILRNNSFSGIIPEGFGELEELEVLDFGHNNFSGPLPNDLGINHSLTILLLDNNDFVGSLSP-EIYKLQV 170 (664)
Q Consensus 92 ~~~~l~~L~~l~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~g~ip~~~~~~~~L~~l~l~~N~~~g~iP~-~~~~l~~ 170 (664)
.+.....|+.+.+..+ +.-.-...+.++..|+.+.+..+ ++--=...+.++.+|+.+.+..+ +. .|+. .+..+++
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~ 287 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSN 287 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTT
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccc
Confidence 4566788888888655 33233456788999999999876 44222345677889999998755 33 3443 4678999
Q ss_pred CCEeeCCCCccc
Q 006019 171 LSESQVDEGQLS 182 (664)
Q Consensus 171 L~~l~l~~n~l~ 182 (664)
|+.+.+.++.++
T Consensus 288 L~~i~l~~~~i~ 299 (379)
T 4h09_A 288 LTKVVMDNSAIE 299 (379)
T ss_dssp CCEEEECCTTCC
T ss_pred cccccccccccc
Confidence 999999887765
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=80.20 E-value=0.59 Score=31.76 Aligned_cols=13 Identities=38% Similarity=0.790 Sum_probs=7.5
Q ss_pred EEEehHHHHHHHH
Q 006019 311 AILGGVIGGAILL 323 (664)
Q Consensus 311 ~i~~~~~~~~~~~ 323 (664)
+|.++++++++++
T Consensus 12 ~IA~gVVgGv~~~ 24 (44)
T 2ks1_B 12 SIATGMVGALLLL 24 (44)
T ss_dssp SSTHHHHHHHHHH
T ss_pred eEEeehhHHHHHH
Confidence 3556676655554
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=73.43 E-value=9.9 Score=35.67 Aligned_cols=116 Identities=11% Similarity=0.086 Sum_probs=76.3
Q ss_pred CCCcccceEEEEecCCCceeEEEEEecCCCChhhhhcccCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCeEEeCcCCCCe
Q 006019 429 NHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAV 508 (664)
Q Consensus 429 ~H~niv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~l~~~~~~~l~~~~~~~ia~~ia~gL~yLH~~~~~ivHrDLk~~NI 508 (664)
.||+.+.. .+-.+.+ . ++..|-...+...+-. -..++...+++++..++..-.+++. -+|--|.|.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD--~--v~~~y~~~~~~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRD--S--FQIHYDINDNHTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRT----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSS--E--EEEEECCCTTSEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGS----SEECCCSGGGE
T ss_pred cCCcccce-EEEEccc--E--EEEEEEcCcccCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcC----ceEEEEecceE
Confidence 58888866 3444433 3 4455544444444432 2357788999999999887655543 46778999999
Q ss_pred EecCCCceEecccCchhhhhhhhhhcccccccCCCCCCcCCcchhhHHHHHHHHhCCCCcc
Q 006019 509 HLTEDYAAKLSDLSFWNEIAMAEMAATSKKLSSAPSASLESNVYNFGVLLFEMVTGRLPYL 569 (664)
Q Consensus 509 Lld~~~~~kl~DfGla~~~~~~~~~~~~pe~~~~~~~s~ksDVySfGvvl~El~tG~~P~~ 569 (664)
.+|.++.+++.-.|+...+.+. ..++..=.-.+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l~P~-------------~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVDPL-------------PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTBSCC-------------CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCCCCC-------------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999988864433211 11222233456678888999998883
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=64.81 E-value=1.3 Score=29.99 Aligned_cols=7 Identities=43% Similarity=0.990 Sum_probs=3.6
Q ss_pred EEehHHH
Q 006019 312 ILGGVIG 318 (664)
Q Consensus 312 i~~~~~~ 318 (664)
+.+++++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4455555
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=61.50 E-value=21 Score=33.60 Aligned_cols=81 Identities=9% Similarity=0.080 Sum_probs=56.6
Q ss_pred CCCHHHHHHHHHHHHHHHH-HhhcCCCCeEEeCcCCCCeEecCCCceEecccCchhhhhhhhhhcccccccCCCCCCcCC
Q 006019 471 HLDWGMRLRIAMGMAYCLE-HMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEMAATSKKLSSAPSASLES 549 (664)
Q Consensus 471 ~l~~~~~~~ia~~ia~gL~-yLH~~~~~ivHrDLk~~NILld~~~~~kl~DfGla~~~~~~~~~~~~pe~~~~~~~s~ks 549 (664)
.++...|++++..++.... +++. -+|--|.|.|+.+|.++.+++.-.|+-..+.+.. .++.-
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~----r~tf~l~P~NL~f~~~~~p~i~hRGi~~~lpP~e-------------~~ee~ 143 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR----RLIFIVCPENLMFNRALEPFFLHVGVKESLPPDE-------------WDDER 143 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS----SEECCCCGGGEEECTTCCEEESCCEETTTBSSCS-------------CCHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC----ceeEEEeCceEEEeCCCcEEEEEcCCcccCCCCC-------------CCHHH
Confidence 4778899999999988665 4443 5677789999999999999999999744332111 11111
Q ss_pred cchhhHHHHHHHHhCCCCc
Q 006019 550 NVYNFGVLLFEMVTGRLPY 568 (664)
Q Consensus 550 DVySfGvvl~El~tG~~P~ 568 (664)
=.-.+=+++..++.++..|
T Consensus 144 fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 144 LLREVKATVLALTEGEYRF 162 (219)
T ss_dssp HHHHHHHHHHHHTTCSSCH
T ss_pred HHHHHHHHHHHHHcCCCCH
Confidence 2334566777788887777
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=45.78 E-value=7.6 Score=25.71 Aligned_cols=13 Identities=46% Similarity=0.974 Sum_probs=6.3
Q ss_pred EEehHHHHHHHHH
Q 006019 312 ILGGVIGGAILLV 324 (664)
Q Consensus 312 i~~~~~~~~~~~~ 324 (664)
+++++++++++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 3445555555444
No 455
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=34.15 E-value=50 Score=26.87 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=35.1
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 006019 589 LQQFVDPTLSSFDEEQLETLGELIKSCVRADPEKRPTMRDIAAIL 633 (664)
Q Consensus 589 ~~~~~d~~~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ev~~~L 633 (664)
+.++++.+.....++.-..+++.|..+|..+|.++.|+.++.+.|
T Consensus 33 lPEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l 77 (104)
T 2fq3_A 33 LPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNV 77 (104)
T ss_dssp CGGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHS
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHc
Confidence 344444443345677778899999999999999999999998776
Done!