Query 006023
Match_columns 664
No_of_seqs 403 out of 2224
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 17:14:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006023.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006023hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0236 Sulfate/bicarbonate/ox 100.0 3E-112 6E-117 967.5 44.3 622 30-657 13-647 (665)
2 TIGR00815 sulP high affinity s 100.0 1E-101 3E-106 876.5 59.3 562 83-649 1-563 (563)
3 PRK11660 putative transporter; 100.0 3.5E-92 7.5E-97 799.7 58.2 525 86-657 19-567 (568)
4 COG0659 SUL1 Sulfate permease 100.0 2.7E-92 5.8E-97 787.4 55.0 544 78-655 3-549 (554)
5 PF00916 Sulfate_transp: Sulfa 100.0 1.2E-48 2.6E-53 407.9 15.8 280 195-475 1-280 (280)
6 TIGR03173 pbuX xanthine permea 100.0 1.6E-26 3.4E-31 253.2 33.4 322 107-472 11-352 (406)
7 PRK10720 uracil transporter; P 99.9 1.3E-25 2.7E-30 246.2 31.3 355 107-511 30-414 (428)
8 TIGR00801 ncs2 uracil-xanthine 99.9 2.6E-25 5.7E-30 243.6 30.8 326 106-471 20-367 (415)
9 COG2252 Xanthine/uracil/vitami 99.9 1.8E-24 3.9E-29 230.1 32.4 382 76-505 4-406 (436)
10 PF13792 Sulfate_tra_GLY: Sulf 99.9 8E-26 1.7E-30 189.1 7.4 83 82-164 1-84 (84)
11 TIGR03616 RutG pyrimidine util 99.9 1.1E-21 2.4E-26 214.9 33.9 328 96-465 29-372 (429)
12 PRK11412 putative uracil/xanth 99.8 1E-18 2.2E-23 190.5 32.1 335 106-472 23-374 (433)
13 COG2233 UraA Xanthine/uracil p 99.8 1.1E-19 2.4E-24 195.2 24.0 308 127-470 57-377 (451)
14 PF00860 Xan_ur_permease: Perm 99.8 1.9E-18 4.2E-23 188.3 28.5 345 97-471 1-365 (389)
15 PF01740 STAS: STAS domain; I 99.8 2E-18 4.3E-23 156.0 8.5 117 530-649 1-117 (117)
16 TIGR02886 spore_II_AA anti-sig 99.7 4.3E-16 9.2E-21 138.2 10.9 102 535-650 5-106 (106)
17 cd07041 STAS_RsbR_RsbS_like Su 99.6 9.3E-16 2E-20 136.7 11.0 102 536-650 8-109 (109)
18 TIGR00843 benE benzoate transp 99.6 1.6E-12 3.5E-17 138.8 30.7 341 98-499 22-392 (395)
19 cd06844 STAS Sulphate Transpor 99.6 7.4E-15 1.6E-19 128.9 10.3 92 535-637 5-96 (100)
20 TIGR00834 ae anion exchange pr 99.5 2.1E-11 4.5E-16 141.4 33.2 348 100-457 372-790 (900)
21 TIGR00377 ant_ant_sig anti-ant 99.4 7.3E-13 1.6E-17 117.7 9.7 100 535-648 9-108 (108)
22 KOG1172 Na+-independent Cl/HCO 99.4 1.8E-09 4E-14 122.4 35.1 351 97-457 351-766 (876)
23 cd07042 STAS_SulP_like_sulfate 99.4 5.7E-12 1.2E-16 111.3 12.1 100 535-644 6-105 (107)
24 PF03594 BenE: Benzoate membra 99.3 1.3E-09 2.9E-14 114.6 30.3 273 178-500 87-377 (378)
25 cd07043 STAS_anti-anti-sigma_f 99.2 7.5E-11 1.6E-15 102.6 11.1 90 536-637 6-95 (99)
26 COG1366 SpoIIAA Anti-anti-sigm 99.2 1.2E-10 2.5E-15 105.3 11.4 100 539-652 14-113 (117)
27 PF13466 STAS_2: STAS domain 99.0 1.8E-09 3.9E-14 90.5 8.9 79 542-633 1-79 (80)
28 COG3135 BenE Uncharacterized p 98.9 4.1E-07 8.8E-12 93.9 23.8 274 178-501 102-393 (402)
29 KOG1292 Xanthine/uracil transp 98.8 1.7E-07 3.6E-12 100.6 19.2 297 127-457 54-390 (510)
30 PF00955 HCO3_cotransp: HCO3- 98.8 1.6E-09 3.5E-14 119.8 2.0 348 102-459 38-473 (510)
31 PF11840 DUF3360: Protein of u 97.9 0.0027 5.8E-08 66.4 21.3 253 182-472 145-419 (492)
32 COG3113 Predicted NTP binding 97.5 0.00056 1.2E-08 58.2 8.6 84 541-637 13-96 (99)
33 TIGR00815 sulP high affinity s 91.9 4.9 0.00011 46.4 16.5 109 341-455 14-140 (563)
34 PF11964 SpoIIAA-like: SpoIIAA 91.7 0.14 2.9E-06 45.1 2.8 105 538-654 1-108 (109)
35 PRK10720 uracil transporter; P 91.0 1.5 3.3E-05 48.7 10.8 60 379-442 261-320 (428)
36 COG0659 SUL1 Sulfate permease 89.3 4.4 9.6E-05 46.5 12.8 107 344-456 24-142 (554)
37 KOG3040 Predicted sugar phosph 89.1 0.64 1.4E-05 45.5 5.0 78 578-657 5-87 (262)
38 PF13344 Hydrolase_6: Haloacid 89.0 0.85 1.8E-05 39.8 5.4 71 583-655 1-76 (101)
39 PRK11660 putative transporter; 87.2 30 0.00065 40.0 18.1 115 92-224 274-394 (568)
40 TIGR03173 pbuX xanthine permea 86.5 23 0.00051 38.9 16.2 97 104-217 225-331 (406)
41 PF14213 DUF4325: Domain of un 84.9 5.9 0.00013 32.3 7.9 66 553-630 2-70 (74)
42 PF09345 DUF1987: Domain of un 83.5 4.7 0.0001 35.1 7.0 71 539-618 9-82 (99)
43 TIGR00801 ncs2 uracil-xanthine 81.0 9.2 0.0002 42.3 10.0 116 99-231 235-361 (415)
44 COG5439 Uncharacterized conser 75.4 5.3 0.00012 33.9 4.5 44 579-622 45-89 (112)
45 PRK11412 putative uracil/xanth 75.3 19 0.00042 40.0 10.3 60 377-442 274-335 (433)
46 PF00860 Xan_ur_permease: Perm 74.9 11 0.00024 41.3 8.3 123 339-462 232-364 (389)
47 PF00916 Sulfate_transp: Sulfa 72.9 15 0.00033 37.9 8.5 124 82-223 131-261 (280)
48 PRK09928 choline transport pro 72.7 1.6E+02 0.0034 34.8 17.1 30 590-619 546-575 (679)
49 COG2233 UraA Xanthine/uracil p 72.2 16 0.00034 40.7 8.5 35 108-142 64-99 (451)
50 TIGR03616 RutG pyrimidine util 69.0 27 0.00059 38.8 9.8 108 104-229 253-370 (429)
51 TIGR00640 acid_CoA_mut_C methy 67.5 48 0.001 30.4 9.5 93 536-654 28-124 (132)
52 PF13788 DUF4180: Domain of un 66.2 94 0.002 27.8 10.5 101 537-652 4-112 (113)
53 PRK10444 UMP phosphatase; Prov 65.8 14 0.00031 37.7 6.3 73 581-655 2-79 (248)
54 TIGR01452 PGP_euk phosphoglyco 60.8 17 0.00036 37.8 5.9 74 580-655 2-80 (279)
55 KOG2882 p-Nitrophenyl phosphat 60.7 24 0.00052 36.8 6.7 78 579-657 21-103 (306)
56 TIGR00843 benE benzoate transp 58.8 1.9E+02 0.004 31.9 13.4 105 344-450 23-143 (395)
57 COG0786 GltS Na+/glutamate sym 58.2 51 0.0011 35.8 8.8 44 182-225 7-54 (404)
58 TIGR01457 HAD-SF-IIA-hyp2 HAD- 56.0 25 0.00053 35.9 6.0 73 581-655 2-79 (249)
59 PRK02261 methylaspartate mutas 55.4 75 0.0016 29.3 8.6 69 579-655 54-132 (137)
60 TIGR01458 HAD-SF-IIA-hyp3 HAD- 54.6 25 0.00053 36.1 5.8 74 581-656 2-84 (257)
61 PLN02645 phosphoglycolate phos 53.5 49 0.0011 35.0 8.0 74 579-654 27-105 (311)
62 PRK10669 putative cation:proto 52.8 2.8E+02 0.0061 31.9 14.7 42 579-635 440-481 (558)
63 COG4618 ArpD ABC-type protease 52.4 43 0.00093 37.7 7.3 76 578-655 489-564 (580)
64 TIGR00210 gltS sodium--glutama 50.6 1.1E+02 0.0024 33.6 10.3 40 185-224 8-51 (398)
65 cd02071 MM_CoA_mut_B12_BD meth 50.5 1.9E+02 0.004 25.9 11.5 68 579-654 50-121 (122)
66 cd07023 S49_Sppa_N_C Signal pe 49.9 90 0.0019 30.8 8.8 66 539-616 2-70 (208)
67 TIGR01684 viral_ppase viral ph 48.8 50 0.0011 34.7 6.8 60 578-637 124-189 (301)
68 PRK11475 DNA-binding transcrip 48.7 65 0.0014 31.9 7.5 73 579-653 37-112 (207)
69 cd07019 S49_SppA_1 Signal pept 48.1 86 0.0019 31.1 8.3 69 538-618 1-76 (211)
70 COG1433 Uncharacterized conser 45.1 70 0.0015 29.0 6.3 53 604-659 57-110 (121)
71 COG0573 PstC ABC-type phosphat 44.8 4.1E+02 0.0089 28.2 14.6 36 85-120 64-105 (310)
72 cd07022 S49_Sppa_36K_type Sign 44.5 1.1E+02 0.0023 30.5 8.4 36 578-615 41-76 (214)
73 COG0647 NagD Predicted sugar p 44.0 59 0.0013 33.7 6.5 77 579-656 7-88 (269)
74 TIGR00706 SppA_dom signal pept 44.0 1.1E+02 0.0025 30.1 8.4 58 539-609 2-59 (207)
75 PF00308 Bac_DnaA: Bacterial d 43.2 1E+02 0.0023 30.7 8.1 69 549-619 67-137 (219)
76 PHA00736 hypothetical protein 43.1 1.5E+02 0.0032 23.5 6.8 68 114-191 4-72 (79)
77 TIGR01459 HAD-SF-IIA-hyp4 HAD- 42.2 76 0.0016 32.0 7.0 71 579-651 7-82 (242)
78 cd00394 Clp_protease_like Case 41.6 60 0.0013 30.4 5.8 57 541-609 1-57 (161)
79 PF00072 Response_reg: Respons 41.4 1.9E+02 0.0041 24.3 8.6 56 578-638 42-99 (112)
80 TIGR00822 EII-Sor PTS system, 39.3 4E+02 0.0088 27.6 11.7 25 199-223 165-189 (265)
81 PF03616 Glt_symporter: Sodium 37.9 2.1E+02 0.0046 31.1 10.0 37 185-221 8-48 (368)
82 COG0053 MMT1 Predicted Co/Zn/C 37.3 4.1E+02 0.0089 28.0 11.8 28 540-568 249-276 (304)
83 COG1121 ZnuC ABC-type Mn/Zn tr 37.2 1.1E+02 0.0024 31.4 7.1 43 578-621 156-198 (254)
84 PRK03659 glutathione-regulated 36.8 3.1E+02 0.0068 31.9 11.8 42 579-635 423-464 (601)
85 PRK11778 putative inner membra 36.5 1.3E+02 0.0028 32.2 7.8 70 536-617 89-159 (330)
86 TIGR00844 c_cpa1 na(+)/h(+) an 34.6 9.1E+02 0.02 29.3 15.6 43 259-307 11-53 (810)
87 TIGR00705 SppA_67K signal pept 34.6 5.3E+02 0.011 30.0 13.0 42 577-618 91-132 (584)
88 PRK10949 protease 4; Provision 34.3 5.4E+02 0.012 30.2 13.0 43 576-618 109-151 (618)
89 cd03412 CbiK_N Anaerobic cobal 33.8 1.6E+02 0.0034 26.7 7.0 55 595-657 13-69 (127)
90 PHA03398 viral phosphatase sup 33.2 1.2E+02 0.0025 32.0 6.7 59 578-636 126-190 (303)
91 COG1137 YhbG ABC-type (unclass 32.9 2.1E+02 0.0045 28.6 7.8 57 578-637 156-212 (243)
92 PF03956 DUF340: Membrane prot 32.2 76 0.0016 31.1 4.9 57 438-494 23-80 (191)
93 cd02067 B12-binding B12 bindin 31.1 3.6E+02 0.0079 23.6 10.2 65 579-654 50-118 (119)
94 COG2450 Uncharacterized conser 30.9 2.3E+02 0.0051 25.6 7.2 73 526-618 26-102 (124)
95 KOG0236 Sulfate/bicarbonate/ox 30.2 9.4E+02 0.02 28.5 14.3 119 86-222 313-440 (665)
96 COG1030 NfeD Membrane-bound se 29.1 1.3E+02 0.0028 33.3 6.4 64 537-616 26-89 (436)
97 PRK04596 minC septum formation 28.8 2.7E+02 0.0057 28.6 8.2 75 552-634 28-103 (248)
98 cd02072 Glm_B12_BD B12 binding 28.7 1.2E+02 0.0025 27.8 5.1 61 591-654 57-127 (128)
99 TIGR01686 FkbH FkbH-like domai 28.5 1.1E+02 0.0024 32.4 5.9 52 579-630 2-67 (320)
100 cd07021 Clp_protease_NfeD_like 28.1 1.4E+02 0.0031 28.8 6.0 61 539-615 1-61 (178)
101 TIGR01501 MthylAspMutase methy 27.4 1.2E+02 0.0026 27.9 5.1 59 593-654 61-129 (134)
102 COG4152 ABC-type uncharacteriz 26.1 2.8E+02 0.0061 28.6 7.7 74 578-653 147-221 (300)
103 cd07018 S49_SppA_67K_type Sign 25.7 2E+02 0.0043 28.7 6.8 38 578-616 45-82 (222)
104 COG1269 NtpI Archaeal/vacuolar 25.1 3.5E+02 0.0075 32.0 9.6 45 179-224 456-500 (660)
105 PF13401 AAA_22: AAA domain; P 25.0 81 0.0018 27.8 3.5 36 581-621 89-125 (131)
106 PRK09757 PTS system N-acetylga 23.9 8.3E+02 0.018 25.3 11.2 24 199-222 166-189 (267)
107 PRK03562 glutathione-regulated 23.4 6.3E+02 0.014 29.6 11.3 42 579-635 423-464 (621)
108 PRK04516 minC septum formation 23.1 4E+02 0.0087 27.1 8.2 72 553-634 26-98 (235)
109 PF06686 SpoIIIAC: Stage III s 23.1 3.1E+02 0.0067 21.1 5.9 47 153-207 8-54 (58)
110 TIGR02717 AcCoA-syn-alpha acet 23.0 7.1E+02 0.015 27.8 11.2 36 612-654 402-441 (447)
111 COG3715 ManY Phosphotransferas 23.0 2.8E+02 0.0062 28.6 7.2 64 374-438 51-114 (265)
112 TIGR01662 HAD-SF-IIIA HAD-supe 22.8 1.6E+02 0.0035 26.2 5.1 54 581-634 1-73 (132)
113 PLN03211 ABC transporter G-25; 22.1 2.3E+02 0.005 33.4 7.4 75 579-655 224-300 (659)
114 PF07907 YibE_F: YibE/F-like p 21.4 5.9E+02 0.013 26.0 9.2 35 359-394 144-179 (244)
115 COG0565 LasT rRNA methylase [T 21.3 1.7E+02 0.0038 29.7 5.2 68 579-654 4-74 (242)
116 PRK10582 cytochrome o ubiquino 21.1 5.9E+02 0.013 22.6 8.9 55 205-276 39-93 (109)
117 PRK10949 protease 4; Provision 21.1 4.9E+02 0.011 30.5 9.6 70 536-617 325-401 (618)
118 cd00851 MTH1175 This uncharact 21.0 2E+02 0.0044 24.3 5.1 47 604-653 55-102 (103)
119 TIGR01460 HAD-SF-IIA Haloacid 20.8 1.7E+02 0.0036 29.5 5.2 71 583-655 1-77 (236)
120 COG1296 AzlC Predicted branche 20.8 1.4E+02 0.003 30.4 4.5 44 94-140 10-56 (238)
121 TIGR00955 3a01204 The Eye Pigm 20.6 2.4E+02 0.0051 33.0 7.1 76 579-656 184-261 (617)
122 PF10337 DUF2422: Protein of u 20.3 1.2E+03 0.026 25.9 12.6 78 417-502 135-212 (459)
No 1
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-112 Score=967.47 Aligned_cols=622 Identities=39% Similarity=0.604 Sum_probs=560.8
Q ss_pred cceeecCCCCCchHHHHHHhhhhhccCCCcCcccccccchhhhhHHHHhhhhccccccccCCCh-hhhhhhHHHHHHHHH
Q 006023 30 ARWLLNSPDPPSIWHELAGSIREAFFPRNKLSSSSRVKQTWRRSAFSFLRGLFPILNWGRNYKA-SKFKSDLMAGLTLAS 108 (664)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pi~~wl~~y~~-~~l~~D~~aGltv~~ 108 (664)
.++.++.|+.++..++.++..+++.+++++.++++++++|+++++.++++++|||++|+|+|++ +|+.+|++||+|+|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Pil~Wlp~Y~~~~~l~~DliaGltvg~ 92 (665)
T KOG0236|consen 13 SRASVDTPTFDSSNEEEKSSVENTPTRKDKSERFRNKQRCSSNKFLRSLLSLLPILEWLPKYSLKEWLLGDLIAGLTVGS 92 (665)
T ss_pred ccccccCCCCCcchhhhhccccCccccccHHHHhhccccccHHHHHHHHHhhccHhhhhhcCCchhhchHHHhcCceeee
Confidence 5678888999988888889988887778777777344445666699999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHHhCCCchhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHhhhcCCCC---ChhHHHHHHHHHH
Q 006023 109 LSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQNVQDPAA---DPVAYRKLVFTVT 185 (664)
Q Consensus 109 ~~iPq~~aya~laglpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~~~~~~~~---~~~~~~~~~~~~t 185 (664)
+++||+||||.+||+||+|||||+|+|+++|++||+|||+++||+|++|+|+++++.+..++.. ++..+++++.++|
T Consensus 93 l~VPQ~iaYa~la~lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt 172 (665)
T KOG0236|consen 93 LSVPQGLAYALLAGLPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLT 172 (665)
T ss_pred eecchHHHHHHHcCCChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988887665433 4568899999999
Q ss_pred HHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCcCCcc-hhhH
Q 006023 186 FFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWY-PLNF 264 (664)
Q Consensus 186 ~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 264 (664)
|++|++|++||+|||||+++|+|+|++.||++|+|++|+++|+|+++|+++.+.+.+....+..++...++. ++ +.++
T Consensus 173 ~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 251 (665)
T KOG0236|consen 173 FLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANL-PKTLATL 251 (665)
T ss_pred HHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhcc-cccchhh
Confidence 999999999999999999999999999999999999999999999999997666666665544444333221 22 7899
Q ss_pred HHHHHHHHHHHHHHH-hhcccccccccccchhHHHHHHHHHHHHhhhcCCC-CeeEeecccCCCCCCCccccCCChhhHH
Q 006023 265 VLGCSFLIFLLIARF-IGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKH-GVKIVKHIKGGLNPSSAHQLQLTGPHLG 342 (664)
Q Consensus 265 ~ig~~~l~~ll~~~~-~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~-~v~~vg~ip~glp~p~~p~~~~~~~~~~ 342 (664)
++|++++++++..|. ..++.+|++|+|+|.+++++|++|+++|.++.+++ ....++++|.|+|+|++|.+++..
T Consensus 252 ~~~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~~~~~~i~~g~~~~~lp~~~~~~---- 327 (665)
T KOG0236|consen 252 VLSLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGRYGPIIVGEIPRGFPPPSLPPLSLTP---- 327 (665)
T ss_pred hhHHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccccCCeeeccCCCCCCCCCCCChhhhH----
Confidence 999999999999995 44445666679999999999999999999987764 556667999999999999988754
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhcCCCcchhHHHH
Q 006023 343 QTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVM 422 (664)
Q Consensus 343 ~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~T~ls~iv~ 422 (664)
..+..++.+++++++|+++++|.++++++|++|+||||+|+|++|++||||+|||+|++++||++|.++|+|||++++++
T Consensus 328 ~~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~ 407 (665)
T KOG0236|consen 328 QVIPDAFAIAIVALLEHIAIGKSFASLHGYKVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVS 407 (665)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHH
Confidence 56667778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHhhhchHHHHHHHHHHHhcc-CCCHHHHHHHHhcCccchhHHhhhhhhHhhhhhHHHHHHHHHHHHH
Q 006023 423 AITVLLSLELFTSLLYYTPIAILASIILSALPG-LIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFA 501 (664)
Q Consensus 423 a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~-li~~~~~~~l~k~~~~d~~v~~~t~~~~~~~~v~~Gl~~Gv~~s~~ 501 (664)
++++++++++++|+|+|+|+|+||+|+++++.+ ++++++++++||.+|.|+++|++|++++++.++++|+++||++|++
T Consensus 408 ~~~vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~~l~~~~~~~~lwr~~k~D~~~~~~t~~~~i~~~ve~Glligv~~s~~ 487 (665)
T KOG0236|consen 408 AALVLLALLFLGPLFYYIPKCVLAAIIISALIGMLIQLEDLKPLWRLSKIDLLIWVVTFFTTIFLSLEIGLLIGVAFSLF 487 (665)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhHHHhhhhhhhhheeCCHHHHHHHHHHhheeeEehhhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999 6799999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcCeeeccccCCCCcccCCCCCccccCCCCEEEEEEcCcceeeccHHHHHHHH--HHHHHhhhh---hhhhhc
Q 006023 502 KILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERI--MRWVTEEQD---ELEETT 576 (664)
Q Consensus 502 ~~l~~~~rp~~~~lg~~~~~~~~~~~~~~~~~~~~~~i~Ivrl~g~~L~F~na~~~~~~i--~~~i~~~~~---~~~~~~ 576 (664)
.+++|.+||+...+|++++++.|++.+||+++++.++++|+|++++ ++|.|.+.+++++ .+++++++. ..++..
T Consensus 488 ~ii~~~~~p~~~~l~~~~~t~~~~~~~~y~~~~~~~gi~i~r~~~~-l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (665)
T KOG0236|consen 488 FIILRSQRPRISLLGRIPRTNIYRDINQYRELKEIPGIKIFRISSP-LLFGNVESFEKKLERLKYLRKEEVLENSARELH 566 (665)
T ss_pred HHHHHhcCcchhhhcccCCCccccchhhcchhhccCceEEEEeccc-eeeccHHHHHHHHHHHHhhhhcccccCcccccc
Confidence 9999999999999999999999999999999999999999999999 9999999998877 355554311 111112
Q ss_pred CCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHCCCccccCCcccccCHHHHHHHHhcc
Q 006023 577 KRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTS 656 (664)
Q Consensus 577 ~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~~ 656 (664)
.++.+.+|+||++++++|++|+.+|+++.+++++++++++++|++++++++|.++++.+.++++++|+|++||++.|+..
T Consensus 567 ~~~~~~vild~s~v~~iD~~g~~~L~~l~~~~~~~~i~~~~~n~~~~v~~~l~~~~~~~~~~~~~~f~tv~~av~~~~~~ 646 (665)
T KOG0236|consen 567 ENSIHSVILDCSGVSFIDTSGASALKSLFKDLKTRGVQVLLANCPSSVREKLSKAGFFDFIGKDNLFLSVHDAVLDAVSE 646 (665)
T ss_pred cCcceEEEEECCccchhhHHHHHHHHHHHHHHHhcCcEEEEeCCCHHHHHHHHhhccccccchhhhhccHHHHHHHHHHh
Confidence 22489999999999999999999999999999999999999999999999999999989999999999999999998754
Q ss_pred C
Q 006023 657 K 657 (664)
Q Consensus 657 ~ 657 (664)
+
T Consensus 647 ~ 647 (665)
T KOG0236|consen 647 L 647 (665)
T ss_pred h
Confidence 3
No 2
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=100.00 E-value=1.4e-101 Score=876.46 Aligned_cols=562 Identities=48% Similarity=0.783 Sum_probs=523.0
Q ss_pred cccccccCCChhhhhhhHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHH
Q 006023 83 PILNWGRNYKASKFKSDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSA 162 (664)
Q Consensus 83 Pi~~wl~~y~~~~l~~D~~aGltv~~~~iPq~~aya~laglpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~ 162 (664)
|+++|+++|+++++++|++||+|++++.+||+||||.+||+||++|||++++|+++|++||+||++++||++.+|+++++
T Consensus 1 p~~~wl~~y~~~~l~~Di~aGltv~~~~iP~~~ayA~laglpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~ 80 (563)
T TIGR00815 1 PVLRWLPHYRLKKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGS 80 (563)
T ss_pred ChhhhhhhCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCc
Q 006023 163 LMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTD 242 (664)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~ 242 (664)
++.+++.+......+.+.+.++++++|++|+++|++|+|++++|+|+||+.||++|+|++|+.+|++.++|++..+...+
T Consensus 81 ~v~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~ 160 (563)
T TIGR00815 81 VIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTD 160 (563)
T ss_pred HHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99998754333346788999999999999999999999999999999999999999999999999999999985434466
Q ss_pred HHHHHHHHHHhcCcC-CcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeec
Q 006023 243 VVSVLGSVFSSLHHS-YWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKH 321 (664)
Q Consensus 243 ~~~~~~~~~~~~~~~-~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ 321 (664)
+++.+.+.+.++++. .|||.++++|++++++++..|++.+|+++++|.+.|.+|+++++++++++.++.+++++.++|+
T Consensus 161 ~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~~~~~~~~g~ 240 (563)
T TIGR00815 161 TLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILGH 240 (563)
T ss_pred hHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHccCCCCeEEEee
Confidence 777777778777660 1499999999999999999999999988887777889999999999999998888899999999
Q ss_pred ccCCCCCCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCccccccc
Q 006023 322 IKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGS 401 (664)
Q Consensus 322 ip~glp~p~~p~~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s 401 (664)
+|.|+|.+.+|.++| ..+.+.++.++.+++++++|+++++|++++++||++|+|||++++|++|+++|+|||+|++++
T Consensus 241 ip~g~p~~~~~~~~~--~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~~~d~n~El~a~G~~N~~~~~fg~~p~~~s 318 (563)
T TIGR00815 241 IPSGLSFFPPITLDW--ELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQELVAQGIANIVGSFFSCYPATGS 318 (563)
T ss_pred cCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHhhHHHHHHHHhCccCCCCc
Confidence 999998888776654 457888999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhcCCCcchhHHHHHHHHHHHHHHhhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccchhHHhhhhh
Q 006023 402 FSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFL 481 (664)
Q Consensus 402 ~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d~~v~~~t~~ 481 (664)
++||++|.++|+|||++++++++++++++++++|+++|+|+++||+++++++++|+|+++++++||.++.|+.+|++|++
T Consensus 319 ~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~l~~~~~~~~~~~~~~~d~~i~~~~~~ 398 (563)
T TIGR00815 319 LSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRGLIDYKELYKLWKADKMDFVVWLVTFF 398 (563)
T ss_pred chHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhcccCHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhhHHHHHHHHHHHHHHHHHHhcCcCeeeccccCCCCcccCCCCCccccCCCCEEEEEEcCcceeeccHHHHHHHH
Q 006023 482 GVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANANFIRERI 561 (664)
Q Consensus 482 ~~~~~~v~~Gl~~Gv~~s~~~~l~~~~rp~~~~lg~~~~~~~~~~~~~~~~~~~~~~i~Ivrl~g~~L~F~na~~~~~~i 561 (664)
+++++|++.|+++|+++|++.+++|++||+..++|++++++.|||.++++++++.|+++++|++|+ |+|+|++++++++
T Consensus 399 ~~~~~~~~~Gi~vGv~~s~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~I~r~~g~-L~F~na~~~~~~l 477 (563)
T TIGR00815 399 GVVFTSIEIGLLVGVALSAAFLLLRIARPRGAVLGRVPGTEVYRSIKQYPNARPPPGILVYRVDGP-LYFANAEDLKDRL 477 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeEeeecCCCCcccchhhCcccCCCCCEEEEEcCCc-eEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999888899999999999 9999999999999
Q ss_pred HHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHCCCccccCCcc
Q 006023 562 MRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGC 641 (664)
Q Consensus 562 ~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~~g~~~~i~~~~ 641 (664)
.+.++++.+ ++.+.++.+.+|+||++|+++|+||+++|+++.++++++|+++.+++.++++++.|+++|+.+.+++++
T Consensus 478 ~~~~~~~~~--~~~~~~~~~~vIlD~~~V~~iDsSg~~~L~~l~~~l~~~g~~l~l~~~~~~v~~~l~~~gl~~~~~~~~ 555 (563)
T TIGR00815 478 LKRIEDETR--RELERPPLQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANPNKAVRSTLKRGGLVELIGEEH 555 (563)
T ss_pred HHHHhhhcc--ccccCCCceEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEecCChHHHHHHHHCCchhhcCCcc
Confidence 887664221 111223579999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCHHHH
Q 006023 642 VYLSVAEA 649 (664)
Q Consensus 642 if~tv~~A 649 (664)
+|+|+|||
T Consensus 556 ~f~s~~~A 563 (563)
T TIGR00815 556 FFPSVSDA 563 (563)
T ss_pred eeCChhhC
Confidence 99999986
No 3
>PRK11660 putative transporter; Provisional
Probab=100.00 E-value=3.5e-92 Score=799.73 Aligned_cols=525 Identities=23% Similarity=0.358 Sum_probs=473.8
Q ss_pred ccccCCChhhhhhhHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHh
Q 006023 86 NWGRNYKASKFKSDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQ 165 (664)
Q Consensus 86 ~wl~~y~~~~l~~D~~aGltv~~~~iPq~~aya~laglpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~ 165 (664)
+|+|+|+++++++|++||+|+|++.+||+||||.+||+||+|||||+++|+++|++||+||++++||++.+++++++.++
T Consensus 19 ~wl~~y~~~~l~~D~iAGltv~~~~iPq~mayA~lag~pp~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~~~ 98 (568)
T PRK11660 19 CWKEKYTAARFTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQ 98 (568)
T ss_pred HHHhcCCHHhhhHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHHHH
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred hhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHH
Q 006023 166 NVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVS 245 (664)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~ 245 (664)
+.+ ++.+..+++++|++|+++|++|+|++++|+|+||+.||++|+|++|+.+|++.++|++..+...++++
T Consensus 99 ~~~---------~~~~~~~~~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~~~~~~~~~ 169 (568)
T PRK11660 99 QFG---------LAGLLVATLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHVPEHYLE 169 (568)
T ss_pred Hhh---------HHHHHHHHHHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHHH
Confidence 543 44567789999999999999999999999999999999999999999999999999985444567888
Q ss_pred HHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeec----
Q 006023 246 VLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKH---- 321 (664)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~---- 321 (664)
.+.++++++++ +||.++++|+.++++++..+++.+|. | .++++++++|+++|.++...++++.+|+
T Consensus 170 ~l~~~~~~l~~--~~~~~~~~~~~~l~lll~~~~~~~~i------P--~~li~iiv~t~~~~~~~~~~~~v~~vg~~~~~ 239 (568)
T PRK11660 170 KVGALFQALPT--INWGDALIGIVTLGVLILWPRLKIRL------P--GHLPALLAGTAVMGVLNLLGGHVATIGSRFHY 239 (568)
T ss_pred HHHHHHHhhcc--CCHHHHHHHHHHHHHHHHHHhhcccC------c--hHHHHHHHHHHHHHHHhccCCCceeecccccc
Confidence 89899999999 99999999999999998876554443 3 7799999999999998876677777775
Q ss_pred ----------ccCCCCCCCccc---------cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHH
Q 006023 322 ----------IKGGLNPSSAHQ---------LQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVA 382 (664)
Q Consensus 322 ----------ip~glp~p~~p~---------~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a 382 (664)
+|.++|++.+|. .+++...+.+.++.++.+++++++|++.+++.+++++++++|.||||+|
T Consensus 240 ~~~~g~~~~~ip~~~p~~~~p~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~~~~d~n~EL~a 319 (568)
T PRK11660 240 VLADGSQGNGIPPLLPQFVLPWNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHSANSELVG 319 (568)
T ss_pred cccccccccCCCCCCCCCCCCccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHH
Confidence 677777666553 1234456778888899999999999999999999999999999999999
Q ss_pred HhHhHhHhhhcCcccccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHHhhHHhhhchHHHHHHHHHHHhccCCCHHHH
Q 006023 383 MGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEA 462 (664)
Q Consensus 383 ~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~li~~~~~ 462 (664)
+|++|++||+|||+|++++++||++|.++|+|||++++++++++++++++++|+++|+|+++||+++++++++|++++.+
T Consensus 320 ~G~aNi~~~~fgg~p~~~s~srSa~n~~aGarT~la~iv~a~~~ll~ll~l~~ll~~iP~~vLa~ili~~~~~m~~~~~~ 399 (568)
T PRK11660 320 QGLGNIVAPFFGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWNMSEAHKV 399 (568)
T ss_pred HhHHHHHHHHhCcccccchHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHh-cCccchhHHhhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcCcCeeeccccCCCCcccCCCCCccccCCCCEEE
Q 006023 463 INIYK-VDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILT 541 (664)
Q Consensus 463 ~~l~k-~~~~d~~v~~~t~~~~~~~~v~~Gl~~Gv~~s~~~~l~~~~rp~~~~lg~~~~~~~~~~~~~~~~~~~~~~i~I 541 (664)
+++|| .+|.|+.+|+.+++.+++++++.|+++|+++|++.+++|++|++ +.+ +.++ .++.+++.+
T Consensus 400 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~Gi~~s~~~~~~~~~~~~-----~~~------~~~~---~~~~~~i~i 465 (568)
T PRK11660 400 VDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIAEMT-----RLA------PISV---QDVPDDVLV 465 (568)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcc-----ccc------cccc---ccCCCcEEE
Confidence 88877 68899999999999999999999999999999999999998864 111 1111 334679999
Q ss_pred EEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCC
Q 006023 542 IRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPR 621 (664)
Q Consensus 542 vrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~ 621 (664)
+|++|+ |||+|++++++++.+.. ++.+++|+||++|++||+||+++|+++.|++++ |+++.+++++
T Consensus 466 v~~~g~-L~F~n~~~l~~~l~~~~------------~~~~~VVlD~~~V~~iDssg~~~L~~l~~~l~~-g~~l~l~~l~ 531 (568)
T PRK11660 466 LRINGP-LFFAAAERLFTELESRT------------EGKRIVVLQWDAVPVLDAGGLDAFQRFVKRLPE-GCELRICNLQ 531 (568)
T ss_pred EEeCCe-eeeeeHHHHHHHHHhhC------------CCCCEEEEEcCCCCcccHHHHHHHHHHHHHHHC-CCEEEEecCC
Confidence 999999 99999999999886532 346899999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHCCCccccCCcccccCHHHHHHHHhccC
Q 006023 622 WQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSK 657 (664)
Q Consensus 622 ~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~~~ 657 (664)
+++++.|+++|+.+..+.+++|+|+|||++++++++
T Consensus 532 ~~v~~~l~~~gl~~~~~~~~if~~~~~Al~~~~~~~ 567 (568)
T PRK11660 532 FQPLRTLARAGIQPIPGRLAFYPTLREALADLLRNE 567 (568)
T ss_pred hHHHHHHHHCCChhhcCcccccCCHHHHHHHHHhhc
Confidence 999999999999998888899999999999998653
No 4
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-92 Score=787.43 Aligned_cols=544 Identities=31% Similarity=0.496 Sum_probs=509.8
Q ss_pred hhhhccccccccCCChhhhhhhHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhhhhhhHHHhhccCCcccccchHHHHH
Q 006023 78 LRGLFPILNWGRNYKASKFKSDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVS 157 (664)
Q Consensus 78 ~~~~~Pi~~wl~~y~~~~l~~D~~aGltv~~~~iPq~~aya~laglpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~s 157 (664)
+.+++|..+|.+.|+.+|+++|++||+|+|++++||+||||..||+||++|||++++++++|++||+||++++||++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~Dl~AGltva~valP~ama~a~~aGv~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~ 82 (554)
T COG0659 3 LRSEIPTLKWLPYYFRSWLRGDLLAGLTVAAVALPLAMAFAIAAGVPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFA 82 (554)
T ss_pred chhhccHHHhccccchhhhHHHHHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCccceeccchhhH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhccccccccc
Q 006023 158 MLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHF 237 (664)
Q Consensus 158 l~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~ 237 (664)
+++++.+.+.. +.+++.++++++++|++|+++|++|||++++|+|+||+.||++|+|++|+.+|++.++|++..
T Consensus 83 ~v~a~~i~~~~------~~g~~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~ 156 (554)
T COG0659 83 VVLAAVIASLV------ETGLALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASK 156 (554)
T ss_pred HHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 99999998654 457899999999999999999999999999999999999999999999999999999999853
Q ss_pred CCCCcHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCC--CC
Q 006023 238 TNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADK--HG 315 (664)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~--~~ 315 (664)
. .++++.+..++++..+ +||.+++++++++++++.++++.+|+| +++++++++|.++|.++.+. +|
T Consensus 157 ~--~~~~~~~~~l~~~~~~--~~~~~~~lg~~~l~il~~~~~~~~~~P--------~~liaiv~~t~i~~~~~~~~~~~G 224 (554)
T COG0659 157 V--SGFWAKVSALFTVLLT--INLATLLLGLLTLAILLFLPRLTPRIP--------SPLIALVLGTLIVWIFPLDSLRYG 224 (554)
T ss_pred c--cchHHHHHHHHHhccc--ccHHHHHHHHHHHHHHHHccchhhhCC--------cHHHHHHHHHHHHHHhcCCchhcc
Confidence 2 3377788888999988 999999999999999999887766554 78999999999999998763 66
Q ss_pred eeEeecccCCCCCCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCc
Q 006023 316 VKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSC 395 (664)
Q Consensus 316 v~~vg~ip~glp~p~~p~~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~ 395 (664)
++.|++|.++|.+.+|++++ ..+.+.++.++.+++++++|++.++++++.++|+++|.||||+|+|++|++++||||
T Consensus 225 -~i~~~lp~~~~~~~~P~~~~--~~~~~l~~~al~la~lg~iesllta~~~~~~~~~~~d~nrELiaqGiaNi~sglfgg 301 (554)
T COG0659 225 -EIPGSLPSGLPHFRLPNVSL--SLLLALLPYALALALLGLLESLLTAVSFDGMTGTKHDSNRELIAQGIANIASGLFGG 301 (554)
T ss_pred -cCcccCCcCCCcccCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHhhHHHHHHHHhCC
Confidence 78899999999999998874 558899999999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHHhhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHH-hcCccchh
Q 006023 396 YVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIY-KVDKLDFL 474 (664)
Q Consensus 396 ~p~t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~-k~~~~d~~ 474 (664)
+|+||+++||++|.++|+|||+|++++++++++++++++|+++|||+|+||+++++++++|+|++.+++++ |..|.|+.
T Consensus 302 ~p~~g~~srS~~nv~sGarT~lsgi~~a~~lll~l~~~~~~~~~IP~a~Laavli~v~~~l~~~~~~~~~~~~~~~~e~~ 381 (554)
T COG0659 302 IPATGSISRSAINIKSGARTRLSGIIHAALLLLLLLFLAPLVSYIPLAALAAVLILVGWGLLDWSLLKPLLRKLPRGELL 381 (554)
T ss_pred ccccchhHHHHHHHHhCCcChHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhccHHHHHHHHhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999954 58999999
Q ss_pred HHhhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcCcCeeeccccCCCCcccCCCCCccccCCCCEEEEEEcCcceeeccH
Q 006023 475 ACIGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPGIELQGRLPRTDTYGDISQFPMAIKTPGILTIRINSALFCFANA 554 (664)
Q Consensus 475 v~~~t~~~~~~~~v~~Gl~~Gv~~s~~~~l~~~~rp~~~~lg~~~~~~~~~~~~~~~~~~~~~~i~Ivrl~g~~L~F~na 554 (664)
++++|++++++.+++.|+.+|+++|++.+++|.+||+...+++.++++. ++.++++..+..|++.++|++|+ ++|+|+
T Consensus 382 v~~~t~~~tv~~~l~~GV~vGi~ls~~~~i~r~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~ri~gp-lfF~~~ 459 (554)
T COG0659 382 VLLTTALLTVFFDLVIGVVVGILLACLLFIRRISRPSIVVLGRVPGPAG-SDNALKPLDEIGPGVLVYRLSGP-LFFGNA 459 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhhccCCCccc-ccccccccccCCCCeEEEEecCc-eEEeeH
Confidence 9999999999999999999999999999999999999999988877655 66778888889999999999999 999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHCCCc
Q 006023 555 NFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLL 634 (664)
Q Consensus 555 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~~g~~ 634 (664)
+++++++.+..++ +.+.+++|+++++++|.|+.++|+++.++++++|+++.+++.+.++++.+++.+..
T Consensus 460 ~~~~~~i~~~~~~-----------~~~~~il~~~~v~~iD~ta~~al~~~~~~~~~~g~~~~i~~~~~~~~~~l~~~~~~ 528 (554)
T COG0659 460 DRLERALLGLIEE-----------RPERVILDLKSVPYIDASAAEALEDLIKELERRGIQLLIVGLSAQVLRLLRRAGLL 528 (554)
T ss_pred HHHHHHHHHHHhc-----------cCCEEEEEcccCCcCChhHHHHHHHHHHHHHHcCCEEEEeccchhhHHHHHHhccc
Confidence 9999999875442 46899999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcccccCHHHHHHHHhc
Q 006023 635 DRIGKGCVYLSVAEAMEACLT 655 (664)
Q Consensus 635 ~~i~~~~if~tv~~Av~~~~~ 655 (664)
+.++++++|+++++|++.+++
T Consensus 529 ~~i~~~~~f~~~~~a~~~~~~ 549 (554)
T COG0659 529 YLVGAEHIFDSVDSALEKARK 549 (554)
T ss_pred cccccccccchhHHHHHHHHH
Confidence 999989999999999998764
No 5
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.2e-48 Score=407.87 Aligned_cols=280 Identities=38% Similarity=0.602 Sum_probs=256.3
Q ss_pred HHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHH
Q 006023 195 FGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFL 274 (664)
Q Consensus 195 lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~l~~l 274 (664)
||++|+|++++|+|+||+.||++|+|++|+.+|++.++|++..+...+....+.++++.+++. +||.+.++|+++++++
T Consensus 1 lGllrlG~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l 79 (280)
T PF00916_consen 1 LGLLRLGFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTI-TNWPTLAIGLVALVFL 79 (280)
T ss_pred CccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhc-cchhhhhhhhHHHHHH
Confidence 589999999999999999999999999999999999999985444455566666666666552 4899999999999999
Q ss_pred HHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeecccCCCCCCCccccCCChhhHHHHHHHHHHHHHH
Q 006023 275 LIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTGPHLGQTAKIGLISAVV 354 (664)
Q Consensus 275 l~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip~glp~p~~p~~~~~~~~~~~~~~~~~~~~iv 354 (664)
...+++.++++++++.+.|.+++++++++++++.++.+.++++.+|++|.++|+|.+|+.+++.+.+.+.++.++.++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~p~~li~vv~~~~~~~~~~~~~~~v~~~~~i~~~lp~~~~p~~~~~~~~~~~~~~~a~~ia~v 159 (280)
T PF00916_consen 80 LIIRLLPKRLPSRFWPPIPAPLIVVVLGTLLSWLFLLDKYGVAIVGEIPSGLPPPSLPSFDISWSLILDLLPTALAIAIV 159 (280)
T ss_pred hhhhhhhhhccccccccccccceeeehhhhhhhhhhhccccccccccccccCccccCcccccccccccccchhHHHHHHH
Confidence 99998887787777788889999999999999999888889999999999999999994444445678888899999999
Q ss_pred HHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHHhh
Q 006023 355 ALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFT 434 (664)
Q Consensus 355 ~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~l~ 434 (664)
+++|++.+++.++++++|++|.|||++++|++|+++|+|||+|+++++|||++|.++|+|||++++++++++++++++++
T Consensus 160 ~~~~s~~~~~~~~~~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs~~~~~~Ga~t~~s~~~~~~~~l~~l~~~~ 239 (280)
T PF00916_consen 160 GFIESLLIAKSIAKKTGYRIDPNQELIALGLANIVSGLFGGMPGSGSFSRSAVNYRAGARTRLSGLISALFVLLVLLFLA 239 (280)
T ss_pred HHHHHHHhhhhhcccccccCCcHHHHHHhhhccccchhhcccccccccccchHHHhcCcceeehhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccchhH
Q 006023 435 SLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLA 475 (664)
Q Consensus 435 ~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d~~v 475 (664)
|+++|+|+++||+++++++++|+|+++++++||.+|.|+++
T Consensus 240 ~~l~~iP~~~La~ili~~~~~l~~~~~~~~~~~~~~~d~~i 280 (280)
T PF00916_consen 240 PLLAYIPKAVLAAILIVVGISLIDWSSLRRLWRVSKADFLI 280 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhcCChhheEC
Confidence 99999999999999999999999999999999999999864
No 6
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=99.96 E-value=1.6e-26 Score=253.21 Aligned_cols=322 Identities=17% Similarity=0.164 Sum_probs=242.4
Q ss_pred HHHHHHHHHHHHHHhCCCc-------hhhhhhhhhhhHHHh----hccCCcccccchHHHHHHHHHHHHhhhcCCCCChh
Q 006023 107 ASLSIPQSIGYANLAKLDP-------QYGLYTSVIPPLIYA----LMGSSREIAIGPVAVVSMLLSALMQNVQDPAADPV 175 (664)
Q Consensus 107 ~~~~iPq~~aya~laglpp-------~~GLyss~v~~liy~----l~Gss~~~~~Gp~a~~sl~~~~~~~~~~~~~~~~~ 175 (664)
+.+.+|.-++-+ .|+|+ +..++++.++++++. .+|+..++..||.......+.....+
T Consensus 11 ~~i~~p~i~~~a--~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~--------- 79 (406)
T TIGR03173 11 GAVAVPLIVGGA--LGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAG--------- 79 (406)
T ss_pred HHHHHHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhh---------
Confidence 456777766543 58888 578999999999997 67999999999965332222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcC
Q 006023 176 AYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLH 255 (664)
Q Consensus 176 ~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~ 255 (664)
..++.+.++.+++|++++++|. +++++.|++|+.+++.++..+|+.+...++++..|... ..+
T Consensus 80 ~~~~~~~ga~~v~Gii~illg~-~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~---~~~------------- 142 (406)
T TIGR03173 80 GGLGAIFGAVIVAGLFVILLAP-FFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAG---APD------------- 142 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCC---ccc-------------
Confidence 3478999999999999999995 68999999999998889999999999888887755321 011
Q ss_pred cCCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeecccC-CCCC---CCc
Q 006023 256 HSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKG-GLNP---SSA 331 (664)
Q Consensus 256 ~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip~-glp~---p~~ 331 (664)
. .++.+..+++.+++++++.+++.|+..| .++.++++++++++++.++..+ .+.+++.|. .+|. +..
T Consensus 143 ~--~~~~~~~l~l~~l~~~il~~~~~~~~~~-----~~aiLi~ivvg~iva~~~g~~~--~~~i~~~~~~~~P~~~~~~~ 213 (406)
T TIGR03173 143 F--GSPQNLGLALLTLVIILLLNRFGKGFLR-----SIAVLLGLVVGTIVAAALGMVD--FSGVAEAPWFALPTPFHFGA 213 (406)
T ss_pred c--cchHHHHHHHHHHHHHHHHHHHhhhHHH-----HhHHHHHHHHHHHHHHHhcCCC--chhhccCCeeeCCCCCcCCC
Confidence 1 4556667888887777776655554322 2388999999999999987532 222332221 2332 233
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccC---CchHHHHHhHhHhHhhhcCcccccccchhhhhh
Q 006023 332 HQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLD---GNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVN 408 (664)
Q Consensus 332 p~~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d---~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~ 408 (664)
|++++ . .+...+.++++++.|+++..++.++..|++.| .|||+.++|++|+++|+||++|.++...+++++
T Consensus 214 P~f~~--~----~~~~~~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~~p~t~~~~~~~~~ 287 (406)
T TIGR03173 214 PTFDL--V----AILTMIIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNTFPYTSFSQNVGLV 287 (406)
T ss_pred CeeCH--H----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCCCCCcchhhhHHHH
Confidence 44332 2 23334567889999999999999988887765 479999999999999999999988644445688
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHH--hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccc
Q 006023 409 FSAGCQTVVSNIVMAITVLLSLEL--FTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLD 472 (664)
Q Consensus 409 ~~~G~~T~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d 472 (664)
..+|++||++++++++++++..++ ++++++++|.++++++++. .++++....++.++|.+..|
T Consensus 288 ~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~-~~~~i~~~g~~~l~~~~~~~ 352 (406)
T TIGR03173 288 QLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLV-MFGMVAASGIRILSKVDFDR 352 (406)
T ss_pred HHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHHHHHHHHHhCcccC
Confidence 889999999999999999888776 8999999999999998874 89999999988888876544
No 7
>PRK10720 uracil transporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=246.20 Aligned_cols=355 Identities=14% Similarity=0.145 Sum_probs=258.5
Q ss_pred HHHHHHHHHHHHHHhCCCchhhhhhhhhhhHHHhhccC-CcccccchH-HHHHHHHHHHHhhhcCCCCChhHHHHHHHHH
Q 006023 107 ASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGS-SREIAIGPV-AVVSMLLSALMQNVQDPAADPVAYRKLVFTV 184 (664)
Q Consensus 107 ~~~~iPq~~aya~laglpp~~GLyss~v~~liy~l~Gs-s~~~~~Gp~-a~~sl~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (664)
+.+.+|.-+ |+++...+..+.++++++.+++. ..++..||. +.++.+.... . ..++.+..+
T Consensus 30 ~~i~~Pli~------gl~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~sfa~i~~~~~~~--~---------~~~~~~lga 92 (428)
T PRK10720 30 ATVLVPILF------HINPATVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLL--P---------LGYEVALGG 92 (428)
T ss_pred HHHHHHhhc------CCCHHHHHHHHHHHHHHHHHhccCccceEEeCcHHHHHHHHHHH--H---------ccHHHHHHH
Confidence 556666633 89999999999999999998874 566666884 4433333211 1 137889999
Q ss_pred HHHHHHHHHHHHHh--hh--hHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCcCCcc
Q 006023 185 TFFAGVFQSVFGLF--RL--GFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWY 260 (664)
Q Consensus 185 t~l~Gv~~~~lg~l--rl--g~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (664)
.+++|+++++++++ |+ +++.+++|+.|++.+++.+|+.+....++. .|... ...+ . .+
T Consensus 93 v~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~-~g~~~--~~~~-------------~--~~ 154 (428)
T PRK10720 93 FIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGM-AGLLP--AEGQ-------------T--PD 154 (428)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhh-ccccC--CCCc-------------c--cc
Confidence 99999999999997 33 468999999999999999999998776653 23211 0111 1 55
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeecc-cCCCCCCCccccCCChh
Q 006023 261 PLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHI-KGGLNPSSAHQLQLTGP 339 (664)
Q Consensus 261 ~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~i-p~glp~p~~p~~~~~~~ 339 (664)
+.++.+++.+++++++..++.|++.|.+ +.++++++++++++.++..+ +..+++. +.++|.+..|++++ .
T Consensus 155 ~~~~~lalv~l~iil~~~~~~kg~~~~~-----~iLigIvvG~ila~~lG~~d--~~~v~~a~~~~lP~~~~P~fd~--~ 225 (428)
T PRK10720 155 SKTIIISMVTLAVTVLGSVLFRGFLAII-----PILIGVLVGYALSFAMGMVD--TTPIIEAHWFALPTFYTPRFEW--F 225 (428)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccHHHHh-----HHHHHHHHHHHHHHHhcCCC--HHHhhcCccccCCCCCCCcCcH--H
Confidence 6777888888888877655556654432 56999999999999987532 3333322 34566666665443 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCC----ccCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhcCCCc
Q 006023 340 HLGQTAKIGLISAVVALTEAIAVGRSFASIKGY----HLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQT 415 (664)
Q Consensus 340 ~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~----~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~T 415 (664)
.+...++ .+++.+.|+++...+.++..++ +.|.|||+.++|++|+++|+||++|.+++..+..+...+|.++
T Consensus 226 ~il~l~~----~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~~p~tty~en~g~ia~T~v~s 301 (428)
T PRK10720 226 AILTILP----AALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYS 301 (428)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCCCCccccccccceeeecccch
Confidence 3444444 3445567777766666655443 3477999999999999999999999998888888888899999
Q ss_pred chhHHHHHHHHHHHHHH--hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccch------hHH-----------
Q 006023 416 VVSNIVMAITVLLSLEL--FTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDF------LAC----------- 476 (664)
Q Consensus 416 ~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d~------~v~----------- 476 (664)
|....++++++++..++ ++++++.+|.+|++|+.+ +++++++..+++.+|+ ++.|+ .+.
T Consensus 302 r~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i-~~fg~i~~~Gi~~l~~-~~~~~~~~~n~~i~~~~l~~g~~~~ 379 (428)
T PRK10720 302 TWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSL-LLYGVIGASGIRVLIE-SKVDYNKAQNLILTSVILIIGVSGA 379 (428)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHH-ccCCCCcccchhHHHHHHHHHHHHH
Confidence 99888888888877765 999999999999999999 6999999999999975 34442 221
Q ss_pred hhhhhhHhhhhhHHHHHHHHHHHHHHHHHHhcCcC
Q 006023 477 IGAFLGVLFASVEIGLLAAVTISFAKILLNAVRPG 511 (664)
Q Consensus 477 ~~t~~~~~~~~v~~Gl~~Gv~~s~~~~l~~~~rp~ 511 (664)
..++...+..|+..|.++|+.++++...+|.-|++
T Consensus 380 ~~~~~~~~~~gi~~g~~~ai~Lnlll~~~~~~~~~ 414 (428)
T PRK10720 380 KVNIGAAELKGMALATIVGIGLSLIFKLISKLRPE 414 (428)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHhcccccccCC
Confidence 12222333458888999999999998876666654
No 8
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=99.95 E-value=2.6e-25 Score=243.55 Aligned_cols=326 Identities=15% Similarity=0.141 Sum_probs=250.9
Q ss_pred HHHHHHHHHHHHHHHhCCCch-------hhhhhhhhhhHHHhhccCCc---ccccchH-HHHHHHHHHHHhhhcCCCCCh
Q 006023 106 LASLSIPQSIGYANLAKLDPQ-------YGLYTSVIPPLIYALMGSSR---EIAIGPV-AVVSMLLSALMQNVQDPAADP 174 (664)
Q Consensus 106 v~~~~iPq~~aya~laglpp~-------~GLyss~v~~liy~l~Gss~---~~~~Gp~-a~~sl~~~~~~~~~~~~~~~~ 174 (664)
.+.+.+|.-++-+. +++. ..+..+.++++++.+.+..+ ....|+. +.++..+... .+
T Consensus 20 ~~~i~~p~iv~~~~---l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~~~~~~~-~~-------- 87 (415)
T TIGR00801 20 GGTVLVPLLVGLAP---LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVSPMIAIG-SG-------- 87 (415)
T ss_pred HHHHHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHHHHHHHH-hc--------
Confidence 45667777776554 4443 67889999999999987766 6666775 5554443221 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh--hh--hHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHH
Q 006023 175 VAYRKLVFTVTFFAGVFQSVFGLF--RL--GFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSV 250 (664)
Q Consensus 175 ~~~~~~~~~~t~l~Gv~~~~lg~l--rl--g~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~ 250 (664)
..++.+....+++|+++++++++ |+ +++.+++|+.|..+++.++|+.+....++++.|....+...++
T Consensus 88 -~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~~~~------- 159 (415)
T TIGR00801 88 -LGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSSATY------- 159 (415)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCccccccc-------
Confidence 12678899999999999999985 44 4679999999999999999999999999998776421111111
Q ss_pred HHhcCcCCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeeccc-CCCCCC
Q 006023 251 FSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIK-GGLNPS 329 (664)
Q Consensus 251 ~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip-~glp~p 329 (664)
.++.++.+|+.+++++++.+++.|++-| .++.++++++++++++.++..+. .-+.+.| .++|.+
T Consensus 160 --------~~~~~~~vg~~~l~~~vl~~~~~~g~~~-----~~aiLigiv~g~i~a~~lg~~~~--~~v~~~~~~~lP~~ 224 (415)
T TIGR00801 160 --------GSLENLGVAFVVLALIILLNRFGKGFLK-----SISILIGILVGYILALFMGIVDF--SPVIDAPWFSLPTP 224 (415)
T ss_pred --------CchhhHHHHHHHHHHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHcCCccc--hhhccCcccccCCc
Confidence 2456678898888888777766555322 23889999999999999874322 1122333 245544
Q ss_pred CccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccC----CchHHHHHhHhHhHhhhcCcccccccchhh
Q 006023 330 SAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLD----GNKEMVAMGFMNIVGSLTSCYVATGSFSRT 405 (664)
Q Consensus 330 ~~p~~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d----~nqEl~a~G~aNiv~s~fg~~p~t~s~srS 405 (664)
..|..+|+.. .+...+.++++.+.|+++..++++++.|++.| .|||+.++|++|+++|+||++|.+++..++
T Consensus 225 ~~~g~~f~~~----~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~~p~t~~sen~ 300 (415)
T TIGR00801 225 FTFGPSFEWP----AILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGGFPNTTFAQNI 300 (415)
T ss_pred cCCCceecHH----HHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCCCCCcchhhhh
Confidence 4332234433 34444668889999999999999999988664 479999999999999999999999999999
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHHH--hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCcc
Q 006023 406 AVNFSAGCQTVVSNIVMAITVLLSLEL--FTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKL 471 (664)
Q Consensus 406 ~v~~~~G~~T~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~ 471 (664)
+++..+|++||.+.+++|+++++..++ ++++++++|.++++++++ +.++++....++.+++.+..
T Consensus 301 g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l-~~~~~i~~~gi~~l~~~~~~ 367 (415)
T TIGR00801 301 GVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASI-VMFGMIAASGIRILIRNKLD 367 (415)
T ss_pred eeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHHHhCccC
Confidence 999999999999999999999999999 999999999999999999 58999999999999886543
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=99.94 E-value=1.8e-24 Score=230.08 Aligned_cols=382 Identities=19% Similarity=0.269 Sum_probs=288.5
Q ss_pred HHhhhhccccccccCCChhhhhhhHHHHHHHHHHHHHHHHHHHH--------HhCCCch----hhhhhhhhhhHHHhhcc
Q 006023 76 SFLRGLFPILNWGRNYKASKFKSDLMAGLTLASLSIPQSIGYAN--------LAKLDPQ----YGLYTSVIPPLIYALMG 143 (664)
Q Consensus 76 ~~~~~~~Pi~~wl~~y~~~~l~~D~~aGltv~~~~iPq~~aya~--------laglpp~----~GLyss~v~~liy~l~G 143 (664)
++++++|...| +.++++.|++||+|+.+ +|+|-. -+|+|.. ....+++++++.++++.
T Consensus 4 ~~~~~~F~l~~-----~~t~vrtEiiAGlTTFl-----tM~YIl~VnP~IL~~ag~~~~av~~AT~l~a~~gs~~mgl~A 73 (436)
T COG2252 4 GDLDRFFKLKE-----HGTTVRTEVIAGLTTFL-----TMAYIVFVNPQILGAAGMPVGAVFVATCLAAAIGSIAMGLYA 73 (436)
T ss_pred hHHHHHhCccc-----cCchHHHHHHHHHHHHH-----HHHHhheecHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 45666666654 55889999999999998 666633 2466644 34556888999999999
Q ss_pred CCcccccch-HHHHHHHHHHHHhhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhH-HHhhchHHHHHHHHHHHHH
Q 006023 144 SSREIAIGP-VAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGF-LVDFLSHAAIVGFMAGAAI 221 (664)
Q Consensus 144 ss~~~~~Gp-~a~~sl~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~-l~~flp~~vi~Gf~~g~gl 221 (664)
+.| +..+| .+..+....+++...+ ..||.+..+.|++|++++++++.+++. +++.+|+++..|..+|+|+
T Consensus 74 n~P-~alapgmglnAfFaftvv~~~g-------i~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGl 145 (436)
T COG2252 74 NLP-IALAPGMGLNAFFAFTVVLGMG-------LSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGL 145 (436)
T ss_pred cCc-hhhcchhhHHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 855 55555 6777888888887765 238999999999999999999999855 8999999999999999999
Q ss_pred HHHHhhhcccccccccCCCCcHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHH
Q 006023 222 VIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVIL 301 (664)
Q Consensus 222 ~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~ 301 (664)
+|..-.++ -.|+-. .++... -.+.+ .+.+.+++++..+++..... .+|.+. +.+++++.
T Consensus 146 Fia~IgL~-~~Givv-~~~~tl--------v~LG~--~~~p~vll~i~G~~l~~~L~--~~~i~G-------aili~i~~ 204 (436)
T COG2252 146 FIALIGLK-NAGIVV-ANPATL--------VALGD--FTSPGVLLAILGLLLIIVLV--SRKIKG-------AILIGILV 204 (436)
T ss_pred HHHHHHHh-hCCeEE-ecCcce--------EEeec--CCCchHHHHHHHHHHHHHHH--HhhccH-------hhhHHHHH
Confidence 99988887 345421 111111 12222 44455555655555444432 244443 66889999
Q ss_pred HHHHHHhhhcCCCCeeEeecccCCCCCCCccccCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhC------Ccc
Q 006023 302 STLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTG-PHLGQTAKIGLISAVVALTEAIAVGRSFASIKG------YHL 374 (664)
Q Consensus 302 ~t~~~~~~~~~~~~v~~vg~ip~glp~p~~p~~~~~~-~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~------~~~ 374 (664)
.+++++..+.....-...+..|.-.| ....+++.. ......++..+....+.+.|++++-...+++.| ...
T Consensus 205 ~t~~g~~~g~~~~~~~~~~~~p~~~~--~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~~g~~~ 282 (436)
T COG2252 205 TTILGIILGIDVHFGGLVGAPPSLSP--IFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDKNGKMP 282 (436)
T ss_pred HHHHHHHhcccccccccccCCCCccc--hhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCCCCCcc
Confidence 99999998743322222333332221 223444543 233445556677788899999888888776643 234
Q ss_pred CCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHHhhHHhhhchHHHHHHHHHHHhc
Q 006023 375 DGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALP 454 (664)
Q Consensus 375 d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~ 454 (664)
|.+|-+.+++++.++|+++|+.|.+ ++-+|+...+.|+||.++.++.++++++. +|++|++..+|..+.++.+++++.
T Consensus 283 ~~~~al~~D~v~t~~ga~~GtS~~t-~yIESaaGva~GgrTGltavv~g~lFl~~-lf~~Pl~~~vP~~AtapaLi~vG~ 360 (436)
T COG2252 283 RIGKALLADSVATVVGALFGTSTVT-AYIESAAGVAAGGRTGLTAVVTGLLFLLS-LFFSPLAALVPGYATAPALIIVGA 360 (436)
T ss_pred ccchHHHHhHHHHHHHHhcCCcchh-hhhhcccccccccccccHHHHHHHHHHHH-HHHHHHHHhCcHhhhhHHHHHHHH
Confidence 7889999999999999999999977 89999999999999999999999999999 699999999999999999999998
Q ss_pred cCCCHHHHHHHHhcCccchhHHhhhhhhHhhhhhHHHHHHHHHHHHHHHHH
Q 006023 455 GLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAVTISFAKILL 505 (664)
Q Consensus 455 ~li~~~~~~~l~k~~~~d~~v~~~t~~~~~~~~v~~Gl~~Gv~~s~~~~l~ 505 (664)
.|+ ..+.++|+.|+.....+|++.++..+.+.+.-|+.++++.+..
T Consensus 361 lM~-----~~v~~id~~d~~ea~PaF~tiv~mplTySIa~Gia~Gfi~y~i 406 (436)
T COG2252 361 LML-----SSVKQIDWSDFTEAVPAFLTIVMMPLTYSIADGIAFGFISYVI 406 (436)
T ss_pred HHH-----hhhccCCchhhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 887 5778899999999999999999999999999998888876654
No 10
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=99.92 E-value=8e-26 Score=189.07 Aligned_cols=83 Identities=52% Similarity=0.981 Sum_probs=80.7
Q ss_pred ccccccccCCCh-hhhhhhHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhhhhhhHHHhhccCCcccccchHHHHHHHH
Q 006023 82 FPILNWGRNYKA-SKFKSDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLL 160 (664)
Q Consensus 82 ~Pi~~wl~~y~~-~~l~~D~~aGltv~~~~iPq~~aya~laglpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~ 160 (664)
||+++|+++|++ +++++|++||+|++++++||+||||.+||+||++|||++++++++|++||+||++++||++.+++++
T Consensus 1 ~P~l~wl~~y~~k~~~~~D~~aGltva~~~iPq~~a~A~lAg~pp~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~s~l~ 80 (84)
T PF13792_consen 1 FPILQWLPRYSWKSNLRGDLLAGLTVALVAIPQGMAYALLAGVPPIYGLYAAIIPPLIYALFGSSRHMIVGPTAAMSLLI 80 (84)
T ss_pred CCchhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeeeHHHHHHHHHHhhccCCCccccChHHHHHHHH
Confidence 799999999997 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 006023 161 SALM 164 (664)
Q Consensus 161 ~~~~ 164 (664)
++++
T Consensus 81 ~~~v 84 (84)
T PF13792_consen 81 ASVV 84 (84)
T ss_pred HHhC
Confidence 8753
No 11
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=99.91 E-value=1.1e-21 Score=214.93 Aligned_cols=328 Identities=13% Similarity=0.147 Sum_probs=230.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhhhhhhHHHh-hccCCcccccchHHHH-HHHHHHHHhhhcCCCCC
Q 006023 96 FKSDLMAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVIPPLIYA-LMGSSREIAIGPVAVV-SMLLSALMQNVQDPAAD 173 (664)
Q Consensus 96 l~~D~~aGltv~~~~iPq~~aya~laglpp~~GLyss~v~~liy~-l~Gss~~~~~Gp~a~~-sl~~~~~~~~~~~~~~~ 173 (664)
+...++.|+.-.+...--.++...+-|+++...+.+|.++++++. .+|+..++..|+.+.. ..+.. .. ... ..+
T Consensus 29 ~~~~~~~GlQh~lam~~~~v~~Plilgl~~~~tl~~sGi~TllQ~~~~G~rlP~v~G~sf~f~~~~~~-~~-~~~--~~~ 104 (429)
T TIGR03616 29 AAQTIVMGLQHAVAMFGATVLMPLLMGFDPNLTILMSGIGTLLFFLITGGRVPSYLGSSAAFVGAVIA-AT-GYN--GQG 104 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHhCCCceeEEcCcHHHHHHHHH-HH-hhc--ccC
Confidence 367889998877754444444445558999999999999999997 5799899999996443 33322 11 111 112
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhh----hHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHH
Q 006023 174 PVAYRKLVFTVTFFAGVFQSVFGLFRL----GFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGS 249 (664)
Q Consensus 174 ~~~~~~~~~~~t~l~Gv~~~~lg~lrl----g~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~ 249 (664)
++.+++.++.+++++|++++++|++++ +++.|++|+.|.+-.+..+|+.++...++...| .++
T Consensus 105 ~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~~~~-------~~~------ 171 (429)
T TIGR03616 105 TNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSA-------SGF------ 171 (429)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhccc-------ccc------
Confidence 234578899999999999999999876 568889999999999988888888665554221 110
Q ss_pred HHHhcCcCCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhh----hcC-CCCeeEe-eccc
Q 006023 250 VFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLT----KAD-KHGVKIV-KHIK 323 (664)
Q Consensus 250 ~~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~----~~~-~~~v~~v-g~ip 323 (664)
-+|. ++++++.+++...+.|++-|.+ +.|+++++++++++.. +.. ..+.+.+ +.-+
T Consensus 172 ---------~~~~----al~tl~~i~l~~l~~~~~l~~~-----avLiGivvG~iva~~l~~~~g~~~~vd~s~v~~a~~ 233 (429)
T TIGR03616 172 ---------DSWM----AVLTILCIGAVAVFTRGMLQRL-----LILVGLIAAYLAYFILTNVFGLGKAVDFSPISQAAW 233 (429)
T ss_pred ---------ccHH----HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhhcCCCccccCcccccCcc
Confidence 1222 2223333333333444443322 7899999999998764 211 1233333 2333
Q ss_pred CCCCCCCccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCC--chHHHHHhHhHhHhhhcCccccccc
Q 006023 324 GGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDG--NKEMVAMGFMNIVGSLTSCYVATGS 401 (664)
Q Consensus 324 ~glp~p~~p~~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~--nqEl~a~G~aNiv~s~fg~~p~t~s 401 (664)
.++|++..|.+++ ..+ ...+..+++.+.|+++..++.++..+++.|+ ||+++++|++|+++|+||+.|.+.+
T Consensus 234 ~~lP~~~~p~f~~--~~i----l~~~~~~lv~~~esiG~~~a~~~~~~~~~~~~i~r~l~adGl~t~~agl~g~~p~tt~ 307 (429)
T TIGR03616 234 FGLPNFHTPVFNA--NAM----LLIAPVALILVAENLGHFKAVAGMTGRNLDPYMGRAFVGDGLATMLSGSVGGTGVTTY 307 (429)
T ss_pred ccCCcCCCceEcH--HHH----HHHHHHHHHHHHHhhHHHHHHHHHhCCCCCchhccchhhhhHHHHHHHhcCCCCCcce
Confidence 4566666665443 222 2334457788899999888888888777766 7999999999999999999999988
Q ss_pred chhhhhhhhcCCCcchhHHHHHHHHHHHHHH--hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHH
Q 006023 402 FSRTAVNFSAGCQTVVSNIVMAITVLLSLEL--FTSLLYYTPIAILASIILSALPGLIDINEAINI 465 (664)
Q Consensus 402 ~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l 465 (664)
..+..+...+|..+|......++++++..++ ++.+++.+|.+|++|+++ ..++++...+++.+
T Consensus 308 ~en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i-~~fg~i~~~Gi~~l 372 (429)
T TIGR03616 308 AENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASI-VVFGLIAVAGARIW 372 (429)
T ss_pred eeeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 7777777778888888877777776665543 455999999999999999 69999999998833
No 12
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=99.85 E-value=1e-18 Score=190.54 Aligned_cols=335 Identities=13% Similarity=0.128 Sum_probs=237.8
Q ss_pred HHHHHHHHHHHHHHHhCCCch-------hhhhhhhhhhHHHhhccCCcccccchHHHH-HHHHHHHHhhhcCCCCChhHH
Q 006023 106 LASLSIPQSIGYANLAKLDPQ-------YGLYTSVIPPLIYALMGSSREIAIGPVAVV-SMLLSALMQNVQDPAADPVAY 177 (664)
Q Consensus 106 v~~~~iPq~~aya~laglpp~-------~GLyss~v~~liy~l~Gss~~~~~Gp~a~~-sl~~~~~~~~~~~~~~~~~~~ 177 (664)
.+.+.+|.-++= ..|+++. ..+..+.+.+++...+|+..++.-||.... ..+..-...... .+....+.
T Consensus 23 ~~~i~vPliva~--a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~~~~~-~g~~~~~~ 99 (433)
T PRK11412 23 CNTVVVPPTLLS--AFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEAS-RGTPINDI 99 (433)
T ss_pred HHHHHHHHHHHH--HcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHhcccc-cCccHHHH
Confidence 456777777654 4688875 678899999999999999999999996443 323222111100 00001122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCc
Q 006023 178 RKLVFTVTFFAGVFQSVFGLFR-LGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHH 256 (664)
Q Consensus 178 ~~~~~~~t~l~Gv~~~~lg~lr-lg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~ 256 (664)
.+......+++|++++++|..+ ++++.|++|+-|.+-++.-+|+.++...++++.|.+. ....++ ++
T Consensus 100 ~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~-~~~~~~-----------~~ 167 (433)
T PRK11412 100 ATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPF-GIADPN-----------GK 167 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCc-cCcccc-----------cc
Confidence 2333446899999999999998 7999999999999999999999999999999888621 001111 11
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHH-hhhcCCCCeeEeeccc-CCCCCCCcccc
Q 006023 257 SYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVY-LTKADKHGVKIVKHIK-GGLNPSSAHQL 334 (664)
Q Consensus 257 ~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~-~~~~~~~~v~~vg~ip-~glp~p~~p~~ 334 (664)
+++..+.+++.++++++...++.|++-|.+ +.|+++++|++++. .++.|. ..+++.+ ..+| +..|.
T Consensus 168 --~~~~~~~~a~~~l~~il~~~~~~~g~~~~~-----svLiGiv~G~v~a~~~~g~d~---~~v~~a~w~~~p-fG~P~- 235 (433)
T PRK11412 168 --IQLPPFGLSVAVMCLVLAMIIFLPQRIARY-----SLLVGTIVGWILWAFCFPSSH---SLSGELHWQWFP-LGSGG- 235 (433)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHhhhHHHHH-----HHHHHHHHHHHHHHHHhCCCc---chhccCCceeec-CCCCC-
Confidence 444566777888887777776777654433 78999999999754 444422 2223322 1222 23342
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCc----cCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhh
Q 006023 335 QLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYH----LDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFS 410 (664)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~----~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~ 410 (664)
+|++.. +...+..+++...|+++.-++.++..+++ .+.+|.+.++|++|+++++||++|.+....+..+-..
T Consensus 236 ~F~~~~----il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~laglfg~~p~tt~sqNvGvi~~ 311 (433)
T PRK11412 236 ALEPGI----ILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQ 311 (433)
T ss_pred ccCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHhcCCCCCCchhhhhhhhhh
Confidence 243332 33344456666677766666666555443 3568899999999999999999999988889999999
Q ss_pred cCCCcchhHHHHHHHHHHHHHH--hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccc
Q 006023 411 AGCQTVVSNIVMAITVLLSLEL--FTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLD 472 (664)
Q Consensus 411 ~G~~T~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d 472 (664)
+|.++|....+.|+++++..++ ++.++..||.+|++|+.++ .++++-...++.+.|.+..+
T Consensus 312 TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~-~Fg~I~~~Gi~~l~~~~~~~ 374 (433)
T PRK11412 312 TGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLV-SYLPLLGSALVFSQQITFTA 374 (433)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999998877 8889999999999999988 78888777787777766433
No 13
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=99.85 E-value=1.1e-19 Score=195.19 Aligned_cols=308 Identities=15% Similarity=0.112 Sum_probs=231.4
Q ss_pred hhhhhhhhhhHHHhh----ccCCcccccch-HHHHHHHHHHHHhhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 006023 127 YGLYTSVIPPLIYAL----MGSSREIAIGP-VAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLG 201 (664)
Q Consensus 127 ~GLyss~v~~liy~l----~Gss~~~~~Gp-~a~~sl~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg 201 (664)
+.|.+|.++++++.+ +|+.-+...|. ++.++.+.. +.++.+ ..++.+....+.+|++.++++.+ +.
T Consensus 57 ~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~-~~~~~g-------~~~~~~~G~ii~ag~~~~li~~~-~~ 127 (451)
T COG2233 57 ADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIA-IGGTTG-------DGIAALLGGIIAAGLVYFLISPI-VK 127 (451)
T ss_pred HHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHH-HHhccC-------CchHHHHHHHHHHHHHHHHHHHH-HH
Confidence 569999999999998 44455555566 344444433 222221 12567889999999999999988 45
Q ss_pred -HHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHh
Q 006023 202 -FLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFI 280 (664)
Q Consensus 202 -~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~ 280 (664)
|+.|++|+-|.+-++.-+|+.++...++.+.|......+.++ .+..++.+++.++++.++..++
T Consensus 128 ~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~~~~~~---------------~~~~~l~la~~tl~~il~~~~f 192 (451)
T COG2233 128 IRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAAGNPDF---------------GSLENLGLALVTLLIILLINRF 192 (451)
T ss_pred HHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCCCCccc---------------CchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987632222222 5667788999999888888777
Q ss_pred hcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeeccc-CCCCCCCccccCCChhhHHHHHHHHHHHHHHHHHHH
Q 006023 281 GRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIK-GGLNPSSAHQLQLTGPHLGQTAKIGLISAVVALTEA 359 (664)
Q Consensus 281 ~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip-~glp~p~~p~~~~~~~~~~~~~~~~~~~~iv~~~e~ 359 (664)
.|.+-|. .+.|+++++|+++++..+.-+ .+.+.+-| -.+|.|..+...|++..+..+++ ++++.+.|+
T Consensus 193 ~~g~~~~-----i~ILiGlv~G~~la~~~G~vd--f~~v~~a~w~~~P~~~~fg~~F~~~ail~m~~----v~iV~~~E~ 261 (451)
T COG2233 193 GKGFLRR-----IPILIGLVVGYLLALFMGMVD--FSGVAEAPWFALPTPFYFGMAFDWGAILTMLP----VAIVTIVEH 261 (451)
T ss_pred hhhHHHH-----HHHHHHHHHHHHHHHHhCCcC--ccccccCceeeCCcccCCCeeecHHHHHHHHH----HHHHHHHHH
Confidence 7765442 377999999999999987321 22233332 24565554433555444444444 555666666
Q ss_pred HHHHHHHhhhhCCc----cCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHH--h
Q 006023 360 IAVGRSFASIKGYH----LDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLEL--F 433 (664)
Q Consensus 360 i~~~~~~a~~~~~~----~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~--l 433 (664)
++--++.++..|++ .+.+|.++++|++++++++||++|.|+...+..+...+|.+||....+.|++.++..++ +
T Consensus 262 ~G~i~A~~~itg~~~~~~~~l~rg~~aDGlat~iag~fg~~p~TtfaqNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~ 341 (451)
T COG2233 262 TGDITATGEITGRDLDGKPRLRRGLLADGLATLIAGLFGGFPNTTFAQNIGVVALTGVYSRYVIAGAAVILILLGLFPKF 341 (451)
T ss_pred hhhhhhHHhHhCCcCccCcccccceeeccHHHHHHHhcCCCCCCchhhceeeeeeccCChhHHHHHHHHHHHHHHhhHHH
Confidence 66555555555544 45578899999999999999999999999999999999999999999999998888876 8
Q ss_pred hHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCc
Q 006023 434 TSLLYYTPIAILASIILSALPGLIDINEAINIYKVDK 470 (664)
Q Consensus 434 ~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~ 470 (664)
+.+++.||.+|++|+.++ +++++....++.+-|.+.
T Consensus 342 ~al~~sIP~pVlGGa~iv-mFG~Ia~sGir~l~~~~~ 377 (451)
T COG2233 342 GALIQSIPSPVLGGAMLV-LFGMIAASGIRILIRNKV 377 (451)
T ss_pred HHHHHhCChhhhhHHHHH-HHHHHHHHHHHHHHhccc
Confidence 899999999999999888 899998888877766443
No 14
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=99.83 E-value=1.9e-18 Score=188.29 Aligned_cols=345 Identities=18% Similarity=0.126 Sum_probs=210.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHh----CC--C----chhhhhhhhhhhHHHhh-ccCCcccccchHHHHHHHHHHHHh
Q 006023 97 KSDLMAGLTLASLSIPQSIGYANLA----KL--D----PQYGLYTSVIPPLIYAL-MGSSREIAIGPVAVVSMLLSALMQ 165 (664)
Q Consensus 97 ~~D~~aGltv~~~~iPq~~aya~la----gl--p----p~~GLyss~v~~liy~l-~Gss~~~~~Gp~a~~sl~~~~~~~ 165 (664)
++++++|++-.+...+--+....+. |+ + ....+..+.++++++.+ +|....+..||....-. ....+.
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~-~~~~~~ 79 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGLDADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIF-AFMIVI 79 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS-----------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHH-HHHGGG
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhcccccchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhh-hhhccc
Confidence 3577888888764444333333322 22 1 24678889999999999 88888888888432111 111111
Q ss_pred hhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhh-HHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHH
Q 006023 166 NVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLG-FLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVV 244 (664)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg-~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~ 244 (664)
.. ..+....++.+..+.+++|+++++++++++. ++.+++|+.|..+++.++|+.+....++...|.........+
T Consensus 80 g~---~~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~~~~- 155 (389)
T PF00860_consen 80 GM---AESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDGLLV- 155 (389)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT-B--
T ss_pred cc---ccchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhcccccccccccccc-
Confidence 11 0223456789999999999999999999984 899999999999999999999999999988876521110001
Q ss_pred HHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeeccc-
Q 006023 245 SVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIK- 323 (664)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip- 323 (664)
.++.....++.++++.+....+.+++.+.. +.++++++++++++..+..+.+-. +.+-|
T Consensus 156 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----ailigi~~g~i~~~~~g~~~~~~~-~~~~~~ 215 (389)
T PF00860_consen 156 --------------GDGKNLGLAVLTLLFILLLSLFLKGFLRKG-----AILIGIIAGWIVAAILGVVDFSPS-VSSAPW 215 (389)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHSSSTTTTTH-----HHHHHHHHHHHHHHHHHHTTSSH--HHHS-S
T ss_pred --------------ccccccccccccchhhhhhhhhhhhhcccc-----cchhhhhhhhhhhhcccccccCcc-cccccc
Confidence 334455566666666666555555444332 779999999999998873221110 11111
Q ss_pred CCCCCCCccccCCChh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCc----cCCchHHHHHhHhHhHhhhcCcccc
Q 006023 324 GGLNPSSAHQLQLTGP-HLGQTAKIGLISAVVALTEAIAVGRSFASIKGYH----LDGNKEMVAMGFMNIVGSLTSCYVA 398 (664)
Q Consensus 324 ~glp~p~~p~~~~~~~-~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~----~d~nqEl~a~G~aNiv~s~fg~~p~ 398 (664)
.++|.| ++|..+ .-...+...+...++.+.|+++.-.+.++..|.+ .+.+|.+.++|++|+++|+||+.|.
T Consensus 216 ~~~p~~----~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G~~~~ 291 (389)
T PF00860_consen 216 FSLPSP----FPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFGTSPT 291 (389)
T ss_dssp S------------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT---E
T ss_pred cccccc----cccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhcCCCC
Confidence 112211 111111 1223444555667788888877776666655543 4578999999999999999999999
Q ss_pred cccchhhhhhhhcCCCcchhHHHHHHHHHHHHHH--hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCcc
Q 006023 399 TGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLEL--FTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKL 471 (664)
Q Consensus 399 t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~ 471 (664)
+.+..+.+.-..+|+++|.+++.++++.+++.++ ++|++..+|.+|++|..++ .++++-..+++.+...+..
T Consensus 292 t~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv-~~g~i~~~gi~~i~~~~~~ 365 (389)
T PF00860_consen 292 TTYSENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLV-LFGMIMMSGIRNIDWVDLD 365 (389)
T ss_dssp EE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHH-HHHHHHHHHHHHHHHTTS-
T ss_pred ccccccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHH-HHHHHHHHHhHhheecccC
Confidence 9777777777888999999999999988877765 8999999999999888766 3444334556665554444
No 15
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=99.75 E-value=2e-18 Score=155.96 Aligned_cols=117 Identities=32% Similarity=0.515 Sum_probs=103.9
Q ss_pred CccccCCCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHH
Q 006023 530 FPMAIKTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLA 609 (664)
Q Consensus 530 ~~~~~~~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~ 609 (664)
|++.++.+++.|+|++|+ |+|+|++++++++.+++.+.+++.+ .....+.+||||++|++||++|+++|.++.++++
T Consensus 1 y~~~~~~~~v~ii~~~g~-l~f~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~vIlD~s~v~~iDssgi~~L~~~~~~~~ 77 (117)
T PF01740_consen 1 YIEIETHDGVLIIRLDGP-LFFANAEEFRDRIRKLIDEDPERIK--KRQTIKNVILDMSGVSFIDSSGIQALVDIIKELR 77 (117)
T ss_dssp SCEEEEETTEEEEEEESE-ESHHHHHHHHHHHHHHHCCSSS--H--TSSSSSEEEEEETTESEESHHHHHHHHHHHHHHH
T ss_pred CCeeEEECCEEEEEEeeE-EEHHHHHHHHHHHHHhhhccccccc--ccccceEEEEEEEeCCcCCHHHHHHHHHHHHHHH
Confidence 556677889999999999 9999999999999987764321111 1235799999999999999999999999999999
Q ss_pred hCCCEEEEEcCCHHHHHHHHHCCCccccCCcccccCHHHH
Q 006023 610 SNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEA 649 (664)
Q Consensus 610 ~~gi~l~la~~~~~v~~~L~~~g~~~~i~~~~if~tv~~A 649 (664)
++|++++++++++++++.|+++|+.+.++++++|+|++||
T Consensus 78 ~~g~~~~l~~~~~~v~~~l~~~~~~~~~~~~~~~~s~~~A 117 (117)
T PF01740_consen 78 RRGVQLVLVGLNPDVRRILERSGLIDFIPEDQIFPSVDDA 117 (117)
T ss_dssp HTTCEEEEESHHHHHHHHHHHTTGHHHSCGGEEESSHHHH
T ss_pred HCCCEEEEEECCHHHHHHHHHcCCChhcCCCCccCCHHHC
Confidence 9999999999999999999999999999999999999998
No 16
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=99.66 E-value=4.3e-16 Score=138.21 Aligned_cols=102 Identities=24% Similarity=0.337 Sum_probs=93.8
Q ss_pred CCCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCE
Q 006023 535 KTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIE 614 (664)
Q Consensus 535 ~~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~ 614 (664)
+.+++.+++++|+ |+|+|++.+++.+.+.+++ ++.+.+++||++|+|||+||+++|.+++++++++|++
T Consensus 5 ~~~~~~vi~l~G~-L~f~~~~~~~~~l~~~~~~----------~~~~~vilDls~v~~iDssgi~~L~~~~~~~~~~g~~ 73 (106)
T TIGR02886 5 VKGDVLIVRLSGE-LDHHTAERVRRKIDDAIER----------RPIKHLILNLKNVTFMDSSGLGVILGRYKKIKNEGGE 73 (106)
T ss_pred EECCEEEEEEecc-cchhhHHHHHHHHHHHHHh----------CCCCEEEEECCCCcEecchHHHHHHHHHHHHHHcCCE
Confidence 3568999999999 9999999999999887642 2468999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHHCCCccccCCcccccCHHHHH
Q 006023 615 LVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAM 650 (664)
Q Consensus 615 l~la~~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av 650 (664)
++++|+++++++.|+++|+.+.+ ++|++.++|+
T Consensus 74 l~l~~~~~~v~~~l~~~gl~~~~---~i~~~~~~a~ 106 (106)
T TIGR02886 74 VIVCNVSPAVKRLFELSGLFKII---RIYESEEEAL 106 (106)
T ss_pred EEEEeCCHHHHHHHHHhCCceEE---EEcCChHHhC
Confidence 99999999999999999999888 5999999874
No 17
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=99.64 E-value=9.3e-16 Score=136.73 Aligned_cols=102 Identities=20% Similarity=0.214 Sum_probs=92.1
Q ss_pred CCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEE
Q 006023 536 TPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIEL 615 (664)
Q Consensus 536 ~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l 615 (664)
.+++.+++++|+ |+|+|++.+++++.+.+.+ .+.+.+|+||++|++||+||+++|.+++++++++|+++
T Consensus 8 ~~~~~v~~l~G~-L~~~~a~~~~~~l~~~~~~----------~~~~~vvlDls~v~~iDssg~~~l~~~~~~~~~~g~~l 76 (109)
T cd07041 8 WDGVLVLPLIGD-LDDERAEQLQERLLEAISR----------RRARGVIIDLTGVPVIDSAVARHLLRLARALRLLGART 76 (109)
T ss_pred eCCEEEEeeeee-ECHHHHHHHHHHHHHHHHH----------cCCCEEEEECCCCchhcHHHHHHHHHHHHHHHHcCCeE
Confidence 468999999999 9999999999998765542 24689999999999999999999999999999999999
Q ss_pred EEEcCCHHHHHHHHHCCCccccCCcccccCHHHHH
Q 006023 616 VMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAM 650 (664)
Q Consensus 616 ~la~~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av 650 (664)
+++++++++++.|+++|+.+ +..++|+|++||+
T Consensus 77 ~l~g~~~~v~~~l~~~gl~~--~~~~~~~t~~~Al 109 (109)
T cd07041 77 ILTGIRPEVAQTLVELGIDL--SGIRTAATLQQAL 109 (109)
T ss_pred EEEeCCHHHHHHHHHhCCCh--hhceeeccHHHhC
Confidence 99999999999999999977 3347999999984
No 18
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.59 E-value=1.6e-12 Score=138.82 Aligned_cols=341 Identities=15% Similarity=0.143 Sum_probs=203.0
Q ss_pred hhHHHHHHHHHHHHHHHH--HH--HHHhCCCch---hhh----hhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHhh
Q 006023 98 SDLMAGLTLASLSIPQSI--GY--ANLAKLDPQ---YGL----YTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQN 166 (664)
Q Consensus 98 ~D~~aGltv~~~~iPq~~--ay--a~laglpp~---~GL----yss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~~ 166 (664)
.-+.||+...++..--.. =+ +.-.|+++. ..+ .++.+.+++.+..= ..+++.++...-+.++.....+
T Consensus 22 s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~~-r~Pi~~awStPGaAll~~~~~~ 100 (395)
T TIGR00843 22 PTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIRF-KTPVLTAWSAPGAALLVTGFPG 100 (395)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeecCchHHHHHHHhcCC
Confidence 456688877764432211 11 334577665 222 23444455554444 4667777765545454433333
Q ss_pred hcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhh-hhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHH
Q 006023 167 VQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFR-LGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVS 245 (664)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lr-lg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~ 245 (664)
.. +..+..+-+++|++.+++|+.+ ++|+++++|+++..|.++|+.+.....-++.+.
T Consensus 101 ~~---------~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a~~------------- 158 (395)
T TIGR00843 101 IS---------LNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAALD------------- 158 (395)
T ss_pred CC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 22 5678889999999999999999 699999999999999999998876533221111
Q ss_pred HHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeecccCC
Q 006023 246 VLGSVFSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGG 325 (664)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip~g 325 (664)
+ .+ .++...++..++.|++. | .++.++++++++++++..+..+. . .+...
T Consensus 159 ----------~---~p---ll~~~mll~~l~~~r~~---P------r~avl~aLlvG~iva~~~G~~~~--~---~~~~~ 208 (395)
T TIGR00843 159 ----------G---LF---LICFSMLLCWLASKAFA---P------RYAMIAALICGIAFSFALGDMNP--T---DLDFK 208 (395)
T ss_pred ----------H---hH---HHHHHHHHHHHHHHHhc---c------hHHHHHHHHHHHHHHHHhcCCCc--c---ccccc
Confidence 0 01 22333233333333222 2 23789999999999988763221 1 11112
Q ss_pred CCCC--CccccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCccc------
Q 006023 326 LNPS--SAHQLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYV------ 397 (664)
Q Consensus 326 lp~p--~~p~~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~~p------ 397 (664)
++.| ..|++++. ..+..++...++.+.....-+-...+.+||+.+.|+-+.+.|++|+++++|||++
T Consensus 209 l~~p~~~~P~fs~~-----a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~~p~~~~~~~tGl~sll~ApfGg~~~nlaai 283 (395)
T TIGR00843 209 IALPQFIAPDFSFA-----HSLNLALPLFLVSLAGQFAPGIAALKAAGYNAPAKPIIAAAGLAALFAAFAGGISIGIAAI 283 (395)
T ss_pred cccceeeCCCCCHH-----HHHHHHHHHHHHHHHhcCchHHHHHHHcCCCCCchHHHHHHHHHHHHHhccCCchhhhhHH
Confidence 3333 35555432 2333444444444432222223334558999999999999999999999999999
Q ss_pred ccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHH---hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccchh
Q 006023 398 ATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLEL---FTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFL 474 (664)
Q Consensus 398 ~t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~---l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d~~ 474 (664)
.++-+....... -++|+-.+++..|++.++..++ +..++..+|.+..+++-=.+.++-+.- .+..-.+ +..+..
T Consensus 284 taAic~G~~ah~-d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~~-~l~~a~~-~~~~r~ 360 (395)
T TIGR00843 284 TAAICMGKDAHE-DKDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIAG-NIKIALH-EDQERD 360 (395)
T ss_pred hHHHhcCccccc-CcCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHhc-CcchhH
Confidence 332222223333 3889999999999999988877 566899999987776655555544321 2222222 222333
Q ss_pred HHhhhhhhHh----hh---hhHHHHHHHHHHH
Q 006023 475 ACIGAFLGVL----FA---SVEIGLLAAVTIS 499 (664)
Q Consensus 475 v~~~t~~~~~----~~---~v~~Gl~~Gv~~s 499 (664)
..++||+.|. ++ +-.+|+++|+...
T Consensus 361 ~a~~tflvtaSg~~~~gigaafWgl~~G~~~~ 392 (395)
T TIGR00843 361 AALIAFLATASGLHFLGIGSAFWGLCAGGLAY 392 (395)
T ss_pred HHHHHHHHHHhcCCcccccHHHHHHHHHHHHH
Confidence 3445555443 33 3456788886554
No 19
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=99.58 E-value=7.4e-15 Score=128.86 Aligned_cols=92 Identities=20% Similarity=0.214 Sum_probs=84.2
Q ss_pred CCCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCE
Q 006023 535 KTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIE 614 (664)
Q Consensus 535 ~~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~ 614 (664)
+.|++.++|++|+ ++|+|+++|++++.+.+.+ +..+.+|+||++|+|||+||+++|.+++++++++|++
T Consensus 5 ~~~~v~ii~~~G~-l~f~~~~~~~~~l~~~~~~----------~~~~~vilDls~v~~iDssgl~~L~~l~~~~~~~g~~ 73 (100)
T cd06844 5 KVDDYWVVRLEGE-LDHHSVEQFKEELLHNITN----------VAGKTIVIDISALEFMDSSGTGVLLERSRLAEAVGGQ 73 (100)
T ss_pred EECCEEEEEEEEE-ecHhhHHHHHHHHHHHHHh----------CCCCEEEEECCCCcEEcHHHHHHHHHHHHHHHHcCCE
Confidence 4578999999999 9999999999999765542 3468999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHHCCCcccc
Q 006023 615 LVMASPRWQVIHKLKSAKLLDRI 637 (664)
Q Consensus 615 l~la~~~~~v~~~L~~~g~~~~i 637 (664)
+.++|+++++++.|+++|+.+.+
T Consensus 74 l~l~~~~~~v~~~l~~~gl~~~~ 96 (100)
T cd06844 74 FVLTGISPAVRITLTESGLDKGX 96 (100)
T ss_pred EEEECCCHHHHHHHHHhCchhhh
Confidence 99999999999999999998755
No 20
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=99.51 E-value=2.1e-11 Score=141.41 Aligned_cols=348 Identities=13% Similarity=0.105 Sum_probs=228.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC------CCchhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHhhhcCCCCC
Q 006023 100 LMAGLTLASLSIPQSIGYANLAK------LDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQNVQDPAAD 173 (664)
Q Consensus 100 ~~aGltv~~~~iPq~~aya~lag------lpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~~~~~~~~~ 173 (664)
+-|=+-+.+.++.-++||+.+.+ +...=-|.|+.+.+++|++||+-+-.++|+++.+.+....+..--. ..
T Consensus 372 laa~ifiyFA~L~PaIaFG~ll~~~T~g~~gv~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~---~~ 448 (900)
T TIGR00834 372 LAAVIFIYFAALSPAITFGGLLGEKTRNMMGVSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCE---SN 448 (900)
T ss_pred HHHHHHHHHHHhhHHhhHHHHHHHhhCCcchHHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHh---hc
Confidence 33444455667777888887653 4555669999999999999999999999888777666544332211 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCC-CCcH---------
Q 006023 174 PVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTN-KTDV--------- 243 (664)
Q Consensus 174 ~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~-~~~~--------- 243 (664)
...|+...+.+.+.++++.++++.+...++++|+.+..--.|-.=++++-+...++.+...-.... ..++
T Consensus 449 ~~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~ 528 (900)
T TIGR00834 449 GLEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPK 528 (900)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccc
Confidence 235888899999999999999999999999999999999999999999988888877654321000 0000
Q ss_pred --HHHH-----HHH-----------HHhcCcCCcchhhHHHHHHHHHHHHHHHHhhcc--cccc--cccccchhHHHHHH
Q 006023 244 --VSVL-----GSV-----------FSSLHHSYWYPLNFVLGCSFLIFLLIARFIGRR--NKKL--FWLPAIAPLLSVIL 301 (664)
Q Consensus 244 --~~~~-----~~~-----------~~~~~~~~~~~~~~~ig~~~l~~ll~~~~~~~~--~~~~--~~ip~~~~Li~vi~ 301 (664)
.... ... ....++ .-..++++.+.++.+.+..+.+++. +++. ..+.-.+..++|++
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~--~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~ 606 (900)
T TIGR00834 529 PQGPSVSALLEKDCSKLGGTLGGNNCRFQPN--TALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILI 606 (900)
T ss_pred cccccccccccccccccccccccccccccch--HHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHH
Confidence 0000 000 000011 2234555555555555555544321 1110 12344467788889
Q ss_pred HHHHHHhhhcCCCCeeEeecccCCCCCCCcc--------ccC----CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 006023 302 STLIVYLTKADKHGVKIVKHIKGGLNPSSAH--------QLQ----LTGPHLGQTAKIGLISAVVALTEAIAVGRSFASI 369 (664)
Q Consensus 302 ~t~~~~~~~~~~~~v~~vg~ip~glp~p~~p--------~~~----~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~ 369 (664)
.+.+.|.++... .. --.+|.++.+ ..| .+. +.......++..|+.++++-|+|+-.++....++
T Consensus 607 ~t~v~~~~~~v~--~~-kl~Vp~~f~p-t~p~~R~W~i~p~~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~ 682 (900)
T TIGR00834 607 MVLVDIFIGDTY--TQ-KLSVPSGLKV-TNPSARGWFIPPLGENRPFPWWMMFAAALPALLVFILIFMEQQITTLIVSKK 682 (900)
T ss_pred HHHHHHHhccCc--cc-ccCCCCCcCC-CCCCCCCeEEccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCc
Confidence 999988765111 11 0134555542 222 111 1222345677788889999999987666655443
Q ss_pred hCC---ccCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhc-----------------CC-CcchhHHHHHHHHHH
Q 006023 370 KGY---HLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSA-----------------GC-QTVVSNIVMAITVLL 428 (664)
Q Consensus 370 ~~~---~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~-----------------G~-~T~ls~iv~a~~~ll 428 (664)
.+. ..--+-+++-+|+.|.++|++|--+.+|+..+|....++ ++ .+|+++++.++++.+
T Consensus 683 e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLigl 762 (900)
T TIGR00834 683 ERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLVGL 762 (900)
T ss_pred cccCCCCcccchHHHHHHHHHHHHHhcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHHHH
Confidence 221 111256799999999999999999888887777654431 22 368999999987766
Q ss_pred HHHHhhHHhhhchHHHHHHHHHHHhccCC
Q 006023 429 SLELFTSLLYYTPIAILASIILSALPGLI 457 (664)
Q Consensus 429 ~ll~l~~l~~~iP~~vLa~ili~~~~~li 457 (664)
.+ +++|++.+||++||.|+-++.|+.=+
T Consensus 763 sv-~~~PvL~~IP~aVL~GvFlYMGv~SL 790 (900)
T TIGR00834 763 SI-LMEPILKRIPLAVLFGIFLYMGVTSL 790 (900)
T ss_pred HH-HHHHHHhhccHHHHHHHHHHHHHhhc
Confidence 65 68999999999999999999888644
No 21
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=99.42 E-value=7.3e-13 Score=117.67 Aligned_cols=100 Identities=24% Similarity=0.329 Sum_probs=90.6
Q ss_pred CCCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCE
Q 006023 535 KTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIE 614 (664)
Q Consensus 535 ~~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~ 614 (664)
..+++.+++++|+ ++|.|++.+++.+.+...+ +..+.+++||++++++|++|+++|.++.++++++|++
T Consensus 9 ~~~~~~vi~~~G~-l~~~~~~~~~~~l~~~~~~----------~~~~~vvidls~v~~iDssgl~~L~~~~~~~~~~~~~ 77 (108)
T TIGR00377 9 VQEGVVIVRLSGE-LDAHTAPLLREKVTPAAER----------TGPRPIVLDLEDLEFMDSSGLGVLLGRYKQVRRVGGQ 77 (108)
T ss_pred EECCEEEEEEecc-cccccHHHHHHHHHHHHHh----------cCCCeEEEECCCCeEEccccHHHHHHHHHHHHhcCCE
Confidence 3568999999999 9999999999999876542 2468999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHHCCCccccCCcccccCHHH
Q 006023 615 LVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAE 648 (664)
Q Consensus 615 l~la~~~~~v~~~L~~~g~~~~i~~~~if~tv~~ 648 (664)
+.++++++++.+.|+.+|+.+.+ ++|+|++|
T Consensus 78 ~~l~~~~~~~~~~l~~~~l~~~~---~i~~~~~~ 108 (108)
T TIGR00377 78 LVLVSVSPRVARLLDITGLLRII---PIYPTVEE 108 (108)
T ss_pred EEEEeCCHHHHHHHHHhChhhee---ccCCCCCC
Confidence 99999999999999999999888 48888763
No 22
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=99.37 E-value=1.8e-09 Score=122.37 Aligned_cols=351 Identities=14% Similarity=0.153 Sum_probs=225.7
Q ss_pred hhhHHHHHHHHH---------HHHHHHHHHHHHhC------CCchhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHH
Q 006023 97 KSDLMAGLTLAS---------LSIPQSIGYANLAK------LDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLS 161 (664)
Q Consensus 97 ~~D~~aGltv~~---------~~iPq~~aya~lag------lpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~ 161 (664)
+.|...|+...+ -++--+++|+.+-| +...--|.+..+.+++|++||+-+..++|+++.+.++-.
T Consensus 351 ~SD~~Da~~~~~la~~lfiYfa~l~P~ItFG~ll~~~Tdg~~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~ 430 (876)
T KOG1172|consen 351 KSDFRDAFNIQCLAATLFIYFACLLPAITFGGLLGEATDGLIGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEK 430 (876)
T ss_pred hHHHHHHhccccchHHHHHHHHhhhhHhhHHHHhhhhccchHHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHH
Confidence 555555554443 22333566655432 333446899999999999999999999988777766533
Q ss_pred HHHhhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhccccccccc-CCC
Q 006023 162 ALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHF-TNK 240 (664)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~-~~~ 240 (664)
.+. ... .+.+..|++..+.+.+.+.++.+++..+....+++|+.+..=-.|-.=|+++.+...++.+.++... ...
T Consensus 431 ~lf-~f~--~~~~~dyl~~r~wVglW~~~l~illaa~~as~lv~~~TRfteEiF~~LIs~iFi~eai~kl~~i~~~~~~~ 507 (876)
T KOG1172|consen 431 ALF-KFC--KDNGLDYLAFRAWVGLWTAFLLILLAATNASSLVKYITRFTEEIFGLLISLIFIYEAIKKLIKIFKGLPIE 507 (876)
T ss_pred HHH-HHH--hhCCCchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 322 222 1123568889999999999999999999999999999999999999999999999988866654310 000
Q ss_pred Cc--H---H-HHHHHHHHhcCc----CCcchhhHHHHHHHHHHHHHHHHhhccccccc--------ccccchhHHHHHHH
Q 006023 241 TD--V---V-SVLGSVFSSLHH----SYWYPLNFVLGCSFLIFLLIARFIGRRNKKLF--------WLPAIAPLLSVILS 302 (664)
Q Consensus 241 ~~--~---~-~~~~~~~~~~~~----~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~--------~ip~~~~Li~vi~~ 302 (664)
.+ . . ..... -.+.+. ..+...+.+++++..+..+......|++++.. ++.-.+..++|++-
T Consensus 508 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~ 586 (876)
T KOG1172|consen 508 FDSKPNPGADWSGPE-CESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVF 586 (876)
T ss_pred ccccCCccccccccc-ccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHH
Confidence 00 0 0 00000 000000 01233344444433322222222223333221 23334566778888
Q ss_pred HHHHHhhh-cCCCCeeEeecccCCCCCCCcc--------ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCc
Q 006023 303 TLIVYLTK-ADKHGVKIVKHIKGGLNPSSAH--------QLQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYH 373 (664)
Q Consensus 303 t~~~~~~~-~~~~~v~~vg~ip~glp~p~~p--------~~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~ 373 (664)
+++.|+.+ ....++ .+|.++|++..+ .-.....++..++..|+.++++-|+|+-.++....++ .++
T Consensus 587 s~i~~~~~~~~~~kl----~vp~~~~~t~~~~rgw~v~~~~~~P~~~~~~A~ipalll~iLiFmDqqIts~iv~rk-e~k 661 (876)
T KOG1172|consen 587 SLIDYFGGSVETPKL----PVPSVFPPTWPFDRGWFVPPFGKNPWWYVFAALIPALLLTILIFMDQQITAVIVNRK-ENK 661 (876)
T ss_pred HHHHhhccccCCCcc----ccCcCCCCCCcccCCeeeCCCCCCCHHHHHHHHHHHHHHHHHHHhcchHHHHHhhcc-ccc
Confidence 88888765 222222 234444433221 1122334566778888999999999987766655443 222
Q ss_pred c----CCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhc-----------------CC-CcchhHHHHHHHHHHHHH
Q 006023 374 L----DGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSA-----------------GC-QTVVSNIVMAITVLLSLE 431 (664)
Q Consensus 374 ~----d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~-----------------G~-~T~ls~iv~a~~~ll~ll 431 (664)
. --.=+|+-.|+.|.++|++|=-+..|+..+|....++ |+ .+|++|++.++++.+. .
T Consensus 662 LKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvgls-~ 740 (876)
T KOG1172|consen 662 LKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVGLS-V 740 (876)
T ss_pred CCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHHHH-H
Confidence 2 1244799999999999999999999998888765542 33 3589999999988844 4
Q ss_pred HhhHHhhhchHHHHHHHHHHHhccCC
Q 006023 432 LFTSLLYYTPIAILASIILSALPGLI 457 (664)
Q Consensus 432 ~l~~l~~~iP~~vLa~ili~~~~~li 457 (664)
++.|++..||++||.|+-.+.|+.=+
T Consensus 741 ~~~pvL~~IP~~VL~GvFlYMgv~SL 766 (876)
T KOG1172|consen 741 LLLPVLKLIPMPVLYGVFLYMGVSSL 766 (876)
T ss_pred HHHHHHhhccHHHHHHHHHHHhhccC
Confidence 79999999999999999999888643
No 23
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
Probab=99.37 E-value=5.7e-12 Score=111.32 Aligned_cols=100 Identities=37% Similarity=0.597 Sum_probs=87.9
Q ss_pred CCCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCE
Q 006023 535 KTPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIE 614 (664)
Q Consensus 535 ~~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~ 614 (664)
..+++.+++++|+ ++|.|++.+++++.+..+.. +..+.+|+||++++++|++|+++|.++.++++++|++
T Consensus 6 ~~~~~~v~~l~G~-l~~~~~~~l~~~~~~~~~~~---------~~~~~lilD~~~v~~iDss~~~~L~~~~~~~~~~~~~ 75 (107)
T cd07042 6 EPPGVLIYRIDGP-LFFGNAEYFKDRLLRLVDED---------PPLKVVILDLSAVNFIDSTAAEALEELVKDLRKRGVE 75 (107)
T ss_pred cCCCEEEEEecCc-eEeehHHHHHHHHHHHhccC---------CCceEEEEECCCCchhhHHHHHHHHHHHHHHHHCCCE
Confidence 4568999999999 99999999999997754321 1247999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHHCCCccccCCccccc
Q 006023 615 LVMASPRWQVIHKLKSAKLLDRIGKGCVYL 644 (664)
Q Consensus 615 l~la~~~~~v~~~L~~~g~~~~i~~~~if~ 644 (664)
+.++|+++++.+.++..|+.+.++.+..+.
T Consensus 76 ~~l~~~~~~~~~~l~~~g~~~~~~~~~~~~ 105 (107)
T cd07042 76 LYLAGLNPQVRELLERAGLLDEIGEENFFP 105 (107)
T ss_pred EEEecCCHHHHHHHHHcCcHHHhCccccee
Confidence 999999999999999999998887655443
No 24
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.35 E-value=1.3e-09 Score=114.61 Aligned_cols=273 Identities=17% Similarity=0.195 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCc
Q 006023 178 RKLVFTVTFFAGVFQSVFGLFR-LGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHH 256 (664)
Q Consensus 178 ~~~~~~~t~l~Gv~~~~lg~lr-lg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~ 256 (664)
+..+..+-+++|++.++.|+.+ ++++++.+|.++..++++|+-+-..+.-++ .+.+
T Consensus 87 ~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGvLl~f~l~~f~-----------------------a~~~ 143 (378)
T PF03594_consen 87 FAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGVLLPFGLAAFT-----------------------ALQA 143 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-----------------------HHHh
Confidence 5677888899999999999999 699999999999999999988876543222 1111
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeecccCCCCCCC--cccc
Q 006023 257 SYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSS--AHQL 334 (664)
Q Consensus 257 ~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip~glp~p~--~p~~ 334 (664)
.. .+....++..++.|++.+|+ +.+.+++++..+++..+.-+ . ..++..++.|. .|.|
T Consensus 144 -----~P-~l~~~ml~~~l~~~r~~pr~---------av~~al~~g~~~a~~~g~~~--~---~~~~~~~~~p~~~~P~F 203 (378)
T PF03594_consen 144 -----DP-LLVGPMLAVFLLARRFSPRY---------AVLAALVAGVAVAALTGQLH--P---SALQLSLAHPVFTTPEF 203 (378)
T ss_pred -----HH-HHHHHHHHHHHHHHHHcchh---------HHHHHHHHHHHHHHhcCCCC--c---cccccccceeEEECCcc
Confidence 11 22233334444556565554 45667777777777654211 1 11222344443 4555
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhh--cC
Q 006023 335 QLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFS--AG 412 (664)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~--~G 412 (664)
+| ...+.+++.+.++.+...-.-+-..-+.+||+.+.|+-+..-|++|++.+.|||++.+-+---.++... ++
T Consensus 204 s~-----~a~v~lalPL~ivtmasQnlpG~aVL~a~GY~~p~~~~~~~tGl~s~l~ApfGg~~~nlAaitaAIc~g~eah 278 (378)
T PF03594_consen 204 SW-----SALVSLALPLFIVTMASQNLPGIAVLRAAGYQPPVNPLITVTGLASLLAAPFGGHAVNLAAITAAICAGPEAH 278 (378)
T ss_pred cH-----HHHHHHHHHHHHHHHHhcchHHHHHHHHcCCCCCchHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHcCCccC
Confidence 43 345556666777776644444445556789999999999999999999999999998866666666554 33
Q ss_pred ---CCcchhHHHHHHHHHHHHHH---hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccchhHHhhhhhhHh--
Q 006023 413 ---CQTVVSNIVMAITVLLSLEL---FTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVL-- 484 (664)
Q Consensus 413 ---~~T~ls~iv~a~~~ll~ll~---l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d~~v~~~t~~~~~-- 484 (664)
.|--.++++.|++.++..++ +..++..+|.+..+.+-=.+.++-+. ..+..-++.++ +....++||+.+.
T Consensus 279 ~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~-~sl~~A~~~~~-~r~aAlvtFlvtaSG 356 (378)
T PF03594_consen 279 PDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLG-GSLQTAFSDEK-YREAALVTFLVTASG 356 (378)
T ss_pred CCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHhcCcc-hhHHHHHHHHHHHcC
Confidence 34457889999998888887 56688899998776654444444331 23344444322 2223444554443
Q ss_pred --hh---hhHHHHHHHHHHHH
Q 006023 485 --FA---SVEIGLLAAVTISF 500 (664)
Q Consensus 485 --~~---~v~~Gl~~Gv~~s~ 500 (664)
++ +-.+|+++|++..+
T Consensus 357 isl~gIgaafWgLv~G~~~~~ 377 (378)
T PF03594_consen 357 ISLLGIGAAFWGLVAGLLVHL 377 (378)
T ss_pred CCcccccHHHHHHHHHHHHHh
Confidence 33 34568888877653
No 25
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=99.23 E-value=7.5e-11 Score=102.58 Aligned_cols=90 Identities=26% Similarity=0.292 Sum_probs=82.1
Q ss_pred CCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEE
Q 006023 536 TPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIEL 615 (664)
Q Consensus 536 ~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l 615 (664)
.+++.+++++|+ ++|.|++.+++.+.+..++ +.+.+++|++++.++|++|+.+|.++.++++++|.++
T Consensus 6 ~~~~~ii~l~G~-l~~~~~~~~~~~~~~~~~~-----------~~~~viid~~~v~~iDs~g~~~L~~l~~~~~~~g~~v 73 (99)
T cd07043 6 RGGVLVVRLSGE-LDAATAPELREALEELLAE-----------GPRRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRL 73 (99)
T ss_pred ECCEEEEEEece-ecccchHHHHHHHHHHHHc-----------CCCEEEEECCCCCEEcchhHHHHHHHHHHHHHcCCeE
Confidence 357899999999 9999999999998765431 2589999999999999999999999999999999999
Q ss_pred EEEcCCHHHHHHHHHCCCcccc
Q 006023 616 VMASPRWQVIHKLKSAKLLDRI 637 (664)
Q Consensus 616 ~la~~~~~v~~~L~~~g~~~~i 637 (664)
.++++++++.+.|++.|+.+.+
T Consensus 74 ~i~~~~~~~~~~l~~~gl~~~~ 95 (99)
T cd07043 74 VLVNVSPAVRRVLELTGLDRLF 95 (99)
T ss_pred EEEcCCHHHHHHHHHhCcceee
Confidence 9999999999999999998766
No 26
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=99.21 E-value=1.2e-10 Score=105.30 Aligned_cols=100 Identities=24% Similarity=0.290 Sum_probs=87.4
Q ss_pred EEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEE
Q 006023 539 ILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMA 618 (664)
Q Consensus 539 i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la 618 (664)
..++++.|. |+..++..+++.+.+++.. ...+.+++|++.|+||||+|++.|...++.++++|.++.++
T Consensus 14 ~~vl~l~G~-lD~~~a~~~~e~~~~~~~~----------~~~~~ivIDls~v~~~dS~gl~~L~~~~~~~~~~g~~~~l~ 82 (117)
T COG1366 14 ILVLPLIGE-LDAARAPALKETLLEVIAA----------SGARGLVIDLSGVDFMDSAGLGVLVALLKSARLRGVELVLV 82 (117)
T ss_pred EEEEEeeEE-EchHHHHHHHHHHHHHHhc----------CCCcEEEEECCCCceechHHHHHHHHHHHHHHhcCCeEEEE
Confidence 379999999 9999999999999877654 34567999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCccccCCcccccCHHHHHHH
Q 006023 619 SPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEA 652 (664)
Q Consensus 619 ~~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~ 652 (664)
+.+|++.+.++.+|+.+.+ .++++.+++...
T Consensus 83 ~i~p~v~~~~~~~gl~~~~---~~~~~~~~~~~~ 113 (117)
T COG1366 83 GIQPEVARTLELTGLDKSF---IITPTELEAALA 113 (117)
T ss_pred eCCHHHHHHHHHhCchhhc---ccccchHHHHHH
Confidence 9999999999999998765 356665555443
No 27
>PF13466 STAS_2: STAS domain
Probab=99.00 E-value=1.8e-09 Score=90.46 Aligned_cols=79 Identities=20% Similarity=0.334 Sum_probs=73.5
Q ss_pred EEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCC
Q 006023 542 IRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPR 621 (664)
Q Consensus 542 vrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~ 621 (664)
+++.|. +++.+++.+++.+.++++ .+ +.+++|+++|+++|++|++.|....+.++++|.++.+.|++
T Consensus 1 l~l~G~-l~~~~~~~l~~~l~~~~~-----------~~-~~v~lDls~v~~iDsagl~lL~~~~~~~~~~g~~~~l~~~~ 67 (80)
T PF13466_consen 1 LRLSGE-LDIATAPELRQALQALLA-----------SG-RPVVLDLSGVEFIDSAGLQLLLAAARRARARGRQLRLTGPS 67 (80)
T ss_pred CEEEEE-EeHHHHHHHHHHHHHHHc-----------CC-CeEEEECCCCCeecHHHHHHHHHHHHHHHHCCCeEEEEcCC
Confidence 478999 999999999999988764 22 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCC
Q 006023 622 WQVIHKLKSAKL 633 (664)
Q Consensus 622 ~~v~~~L~~~g~ 633 (664)
+.+++.++..|+
T Consensus 68 ~~~~~ll~~~gl 79 (80)
T PF13466_consen 68 PALRRLLELLGL 79 (80)
T ss_pred HHHHHHHHHhCc
Confidence 999999999987
No 28
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.91 E-value=4.1e-07 Score=93.94 Aligned_cols=274 Identities=18% Similarity=0.200 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hhHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCc
Q 006023 178 RKLVFTVTFFAGVFQSVFGLFR-LGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHH 256 (664)
Q Consensus 178 ~~~~~~~t~l~Gv~~~~lg~lr-lg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~ 256 (664)
...+..+-+.+|...++.|++| ++++++-+|+++-.++.+|+=+-..+..++.+-
T Consensus 102 ~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGILL~F~l~a~~a~~------------------------ 157 (402)
T COG3135 102 FAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGILLRFGLKAFKALP------------------------ 157 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhccC------------------------
Confidence 5677888899999999999999 799999999999999999988877655444321
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeecccCC--CCCCCcccc
Q 006023 257 SYWYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGG--LNPSSAHQL 334 (664)
Q Consensus 257 ~~~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip~g--lp~p~~p~~ 334 (664)
.++ .+.+..+...++.|.+.+|+ +...+++++..++...+.-.+ +....- .|.+..|+|
T Consensus 158 --~~p---~l~lpmv~~~ll~r~f~pr~---------aV~aalvvgv~va~~~G~~~~-----~~~~~~~~~p~~v~P~F 218 (402)
T COG3135 158 --TQP---LLVLPMVLAYLLARVFAPRY---------AVIAALVVGVLVAALLGDLHT-----ALVALEISTPTWVTPEF 218 (402)
T ss_pred --CCh---HHHHHHHHHHHHHHHcCchH---------HHHHHHHHHHHHHHHhCcccc-----cccccccCcceeeCCcc
Confidence 111 12222233334446666665 567777888888877653211 111111 222333444
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhc---
Q 006023 335 QLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSA--- 411 (664)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~--- 411 (664)
+| ..++.+++.+.++.+...-.-+-..-+-+||+.+++--+.+-|+..+.++.|||+..+-.--.-++...-
T Consensus 219 s~-----~A~l~lalPL~lvtmasQN~pGiAvLka~gY~pp~~pl~~~TGl~sll~ApfG~~t~nLaAItAAic~gpdaH 293 (402)
T COG3135 219 SF-----AAMLSLALPLFLVTMASQNLPGIAVLKAAGYQPPPSPLIVATGLASLLSAPFGGHTVNLAAITAAICTGPDAH 293 (402)
T ss_pred cH-----HHHHHHhHHHHHHHHHhccCccceeehhcCCCCCCchHHHHhHHHHHHhcccccceecHHHHHHHHhcCCCCC
Confidence 43 3455666666666665432223333355899999999999999999999999999877433222222221
Q ss_pred --CCCcchhHHHHHHHHHHHHHH---hhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccchhHHhhhhhhH---
Q 006023 412 --GCQTVVSNIVMAITVLLSLEL---FTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGV--- 483 (664)
Q Consensus 412 --G~~T~ls~iv~a~~~ll~ll~---l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d~~v~~~t~~~~--- 483 (664)
-.|.-.+++++|+.-+++.+| +..++..+|+..++.+-=.+..+-+. ..+..-.| |..+-...++||+.|
T Consensus 294 pD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~lAGLALlg~~~-~~l~~A~~-~~~~R~aAlvtF~VTaSG 371 (402)
T COG3135 294 PDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAALAGLALLGTLG-NSLQAALK-DEREREAALVTFLVTASG 371 (402)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHhc-Ccccchhhhhheeehhcc
Confidence 245568999999999999888 44567789987655443222222221 22233333 222222333444333
Q ss_pred -hhh---hhHHHHHHHHHHHHH
Q 006023 484 -LFA---SVEIGLLAAVTISFA 501 (664)
Q Consensus 484 -~~~---~v~~Gl~~Gv~~s~~ 501 (664)
-++ +-.+|++.|.+...+
T Consensus 372 ~tl~GIgaafWGLvaG~~~~~L 393 (402)
T COG3135 372 LTLFGIGAAFWGLVAGLLVLAL 393 (402)
T ss_pred ceeecccHHHHHHHHHHHHHHH
Confidence 333 345677777765544
No 29
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=98.85 E-value=1.7e-07 Score=100.56 Aligned_cols=297 Identities=12% Similarity=0.106 Sum_probs=168.1
Q ss_pred hhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHh--hhcCCCCCh---h----HHHHHHHHHHHHHHHHHHHHHH
Q 006023 127 YGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQ--NVQDPAADP---V----AYRKLVFTVTFFAGVFQSVFGL 197 (664)
Q Consensus 127 ~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~--~~~~~~~~~---~----~~~~~~~~~t~l~Gv~~~~lg~ 197 (664)
.-++++.+.+++...||+..++..||.-..-.-+-+++. +...+.++. + ..++..-.+.++++++|.++|+
T Consensus 54 T~~f~sGI~TllQt~fG~RLp~v~G~Sfafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~ 133 (510)
T KOG1292|consen 54 TIFFVSGITTLLQTTFGTRLPLVQGPSFAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGF 133 (510)
T ss_pred HHhhhccHHHHHHHHhhcccccccccceehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhh
Confidence 457888999999999999999999996433222333333 222222111 1 2345667888999999999999
Q ss_pred hhh-hHHHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHH
Q 006023 198 FRL-GFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLI 276 (664)
Q Consensus 198 lrl-g~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~l~~ll~ 276 (664)
.++ |++.+|+++-.+.=.++-+|+.+.-...+ ++.+ +| -+|+..+.++++
T Consensus 134 sGl~g~l~rfi~Plti~P~v~lvgl~l~~~~~~-----------------------~~~~---~w---eI~l~~~llli~ 184 (510)
T KOG1292|consen 134 SGLWGNLLRFIGPLTIVPLVALVGLGLFQDGFP-----------------------KLGK---HW---EISLPEILLLIL 184 (510)
T ss_pred hhhHHHHHhhcCChhhhhHHHHHhhhhHHhhhh-----------------------hhhh---he---eecHHHHHHHHH
Confidence 996 99999999999988888777765422111 1111 12 123333333332
Q ss_pred HH-H--hhcccc---cccccccchhHHHHHHHHHHHHhh---hcCCC-----Ce----e---Eeeccc-CCCCCC-Cccc
Q 006023 277 AR-F--IGRRNK---KLFWLPAIAPLLSVILSTLIVYLT---KADKH-----GV----K---IVKHIK-GGLNPS-SAHQ 333 (664)
Q Consensus 277 ~~-~--~~~~~~---~~~~ip~~~~Li~vi~~t~~~~~~---~~~~~-----~v----~---~vg~ip-~glp~p-~~p~ 333 (664)
.. + +.++.. +.....-.+.++++.+.=++++++ +...+ +. + ++..-| -..|.| .+..
T Consensus 185 fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~RTD~~~vi~~apWi~vPyP~QwG~ 264 (510)
T KOG1292|consen 185 FSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSCRTDRNGVISSAPWIRVPYPFQWGP 264 (510)
T ss_pred HHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcccccHhhhhccCCceeecCCCccCC
Confidence 22 2 211111 000011112233333333333332 11111 00 0 111111 012211 1111
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hCCccCCchHHHHHhHhHhHhhhcCcccccccchhh-hhh
Q 006023 334 LQLTGPHLGQTAKIGLISAVVALTEAIAVGRSFASI----KGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRT-AVN 408 (664)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~~----~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS-~v~ 408 (664)
..|+......+ ...++++++|+++.=.+.++. ..-....||....+|++.+++|+||.-.++..+++. ++.
T Consensus 265 P~f~~~~~f~m----~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL~gl~G~gtG~Tt~~ENigll 340 (510)
T KOG1292|consen 265 PTFSAGLVFAM----MAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLLAGLFGTGTGSTTSVENIGLL 340 (510)
T ss_pred CcccHHHHHHH----HHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHHHHhhCCCccceeeccceeeE
Confidence 12222222222 345567777876544443333 333445699999999999999999977666555544 334
Q ss_pred hhcCCCcchhHHHHHHHHHHHHHH--hhHHhhhchHHHHHHHHHHHhccCC
Q 006023 409 FSAGCQTVVSNIVMAITVLLSLEL--FTSLLYYTPIAILASIILSALPGLI 457 (664)
Q Consensus 409 ~~~G~~T~ls~iv~a~~~ll~ll~--l~~l~~~iP~~vLa~ili~~~~~li 457 (664)
.-+..-||..--++|.++++.-.+ ++.+|+.||.+++||+.-. +++|+
T Consensus 341 ~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~-~~~mv 390 (510)
T KOG1292|consen 341 GVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCI-LFGMV 390 (510)
T ss_pred eeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH-HHHHH
Confidence 447777888888888888777766 8999999999999998754 44444
No 30
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=98.79 E-value=1.6e-09 Score=119.81 Aligned_cols=348 Identities=15% Similarity=0.216 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhC------CCchhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHhhhcCCCCChh
Q 006023 102 AGLTLASLSIPQSIGYANLAK------LDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQNVQDPAADPV 175 (664)
Q Consensus 102 aGltv~~~~iPq~~aya~lag------lpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~~~~~~~~~~~ 175 (664)
+=+-.-+.++.-+++|+.+-+ +...-.+.++.+.+++|++||+.+-.++|+++.+.+...... +... +..-
T Consensus 38 ~~~flyfa~l~PaItFG~ll~~~T~~~~gv~e~l~~~~i~Gi~f~lf~gQPL~Ilg~TgP~~vf~~~l~-~~~~--~~~~ 114 (510)
T PF00955_consen 38 ATLFLYFACLSPAITFGGLLGEATDGAIGVMEVLLSTAICGIIFSLFSGQPLTILGSTGPVLVFEKILY-KFCK--SYGL 114 (510)
T ss_dssp HHHHHHHHHHHHHHSSS-SS---------HHHHHHHHHHHHHHHHHCC--------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccc--cccc
Confidence 334444566777788776543 444556899999999999999999999988888766643332 2221 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHHHhhhccccccccc-CCCCcH-----------
Q 006023 176 AYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHF-TNKTDV----------- 243 (664)
Q Consensus 176 ~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~-~~~~~~----------- 243 (664)
+|++.-....+.++++.++++.+...++++|+.+..=-.|..=+++..+...++.+..+-.. +-..+.
T Consensus 115 ~fl~~~~wig~w~~~~~~~~~~~~~s~lv~~~TRfTeEiF~~lIs~iFi~ea~~~l~~~~~~~p~~~~~~~~~~c~c~~~ 194 (510)
T PF00955_consen 115 DFLPFRAWIGIWTAIFLLVLAAFNASFLVRYITRFTEEIFALLISIIFIYEAIKKLVKIFKKYPLNSDYVTQYSCQCTPP 194 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57788889999999999999999999999999999999999999999998888887654310 000000
Q ss_pred --------------HH---HHHHH----HHhcCcC----------Ccch----hhHHHHHHHHHHHHHHHHhh------c
Q 006023 244 --------------VS---VLGSV----FSSLHHS----------YWYP----LNFVLGCSFLIFLLIARFIG------R 282 (664)
Q Consensus 244 --------------~~---~~~~~----~~~~~~~----------~~~~----~~~~ig~~~l~~ll~~~~~~------~ 282 (664)
.. .+... ..+.+.. ...+ .++++.+.++.+....+.++ +
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~g~~~g~~c~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~ 274 (510)
T PF00955_consen 195 ENSNNSTLNPWTNLNNGSINWSNLSNSECENINGELVGTSCDDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPR 274 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccH
Confidence 00 00000 0000000 0111 23333344443333333222 2
Q ss_pred ccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeecccCCCCCCC-------cccc-CCChhhHHHHHHHHHHHHHH
Q 006023 283 RNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSS-------AHQL-QLTGPHLGQTAKIGLISAVV 354 (664)
Q Consensus 283 ~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip~glp~p~-------~p~~-~~~~~~~~~~~~~~~~~~iv 354 (664)
+.++ .+.-.+..++|++.+.+.+.++.+.... ++|.++.+.. ++.+ +........++..|+.++++
T Consensus 275 ~vR~--~isDf~v~iaI~~~~~~~~~~~~~~~kL----~vp~~f~pt~~~~r~W~v~p~~~~p~w~~~aA~~palll~iL 348 (510)
T PF00955_consen 275 WVRE--IISDFGVPIAILIMTLVDYLFGVDTPKL----NVPSSFKPTSPGKRGWFVNPFGSLPWWAIFAAIIPALLLTIL 348 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHH--hHHhhHHHHHHHHHHHHHHHhccccccc----CCCCCCCCCCCCCCCeecCcccCCCHHHHHHHHHHHHHHHHH
Confidence 2222 2344466778888888877655221111 2344433211 1111 11111233445556777788
Q ss_pred HHHHHHHHHHHHhhhhCC---ccCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhc-----------------CC-
Q 006023 355 ALTEAIAVGRSFASIKGY---HLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSA-----------------GC- 413 (664)
Q Consensus 355 ~~~e~i~~~~~~a~~~~~---~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~-----------------G~- 413 (664)
-++|+-.++....++.+. ..--+-+|.-.|+.|.++|++|--..+++..+|....++ |+
T Consensus 349 ~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~pGe~~~i~~V~ 428 (510)
T PF00955_consen 349 FFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAPGEKPKIVGVR 428 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccCCCCCeeCeEE
Confidence 888775444433322111 011234589999999999999988888888777654431 22
Q ss_pred CcchhHHHHHHHHHHHHHHhhHHhhhchHHHHHHHHHHHhccCCCH
Q 006023 414 QTVVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDI 459 (664)
Q Consensus 414 ~T~ls~iv~a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~li~~ 459 (664)
.+|+++++.++++.+.+ ++.|++.+||++||.|+-++.|+.-++-
T Consensus 429 EqRvT~l~~~~Ligls~-~l~pvL~~IP~~VL~GvFlymG~~sL~g 473 (510)
T PF00955_consen 429 EQRVTGLLVHLLIGLSL-FLLPVLKLIPMPVLYGVFLYMGVTSLSG 473 (510)
T ss_dssp ----------------------------------------------
T ss_pred EecccHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHhheeeeecC
Confidence 36899999998777666 6789999999999999999988765543
No 31
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=97.87 E-value=0.0027 Score=66.38 Aligned_cols=253 Identities=16% Similarity=0.223 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhH-HHhhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCcCCcc
Q 006023 182 FTVTFFAGVFQSVFGLFRLGF-LVDFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWY 260 (664)
Q Consensus 182 ~~~t~l~Gv~~~~lg~lrlg~-l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (664)
.++.++.|++-++++++|.|. +++.-++-|-+|.+-=.|+.=..+|+++++.-. ..+. ..
T Consensus 145 Lalgilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~kl~~wa----------------~~~~---~~ 205 (492)
T PF11840_consen 145 LALGILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIKKLFAWA----------------NGFD---MG 205 (492)
T ss_pred HHHHHHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHHHHHHHH----------------hccC---cc
Confidence 356789999999999999654 888999998888777777776777777665322 1111 12
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHHhhhcCCCCeeEeecccCCCCCCCccccCCCh--
Q 006023 261 PLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVYLTKADKHGVKIVKHIKGGLNPSSAHQLQLTG-- 338 (664)
Q Consensus 261 ~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~~~~~~~~~v~~vg~ip~glp~p~~p~~~~~~-- 338 (664)
+..+++-++++++ ..++.|..||+.-+| + .-+++.++++..+.. ++.. -+.|+|... ...|.+
T Consensus 206 ~i~fvvi~~tiv~---Ya~L~k~~KrWLaIP----l-~~~~a~~~a~~lGa~---f~f~--t~pglp~ln--P~YWWge~ 270 (492)
T PF11840_consen 206 YIAFVVIIVTIVL---YAYLAKIEKRWLAIP----L-CSILAGVLAFALGAP---FEFT--TEPGLPNLN--PMYWWGEE 270 (492)
T ss_pred HHHHHHHHHHHHH---HHHHHHhccchhhhh----H-HHHHHHHHHHHcCCC---ceee--cCCCCCCCC--CcccccCC
Confidence 2222222222222 223333333322233 2 233444556665532 2211 123443221 111111
Q ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhCCccCCchHHHHHhHhHhHhhhcCcccccccc
Q 006023 339 ----------PHLGQTAKIGLISAVVALTEAIAVGRSFAS------IKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSF 402 (664)
Q Consensus 339 ----------~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~------~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~ 402 (664)
+.+...++.++.....=.-+.++ -+.|.+ .++...|.|+.+....+=|++|+.+||--.++|.
T Consensus 271 tGw~LglP~~~hfiav~PFAiLAVaMWSpDflg-hrvFqelnypk~~~kvlMnvDDTm~~~siRQ~vGs~lGGgN~~SsW 349 (492)
T PF11840_consen 271 TGWQLGLPTLEHFIAVLPFAILAVAMWSPDFLG-HRVFQELNYPKETKKVLMNVDDTMTMCSIRQIVGSILGGGNIASSW 349 (492)
T ss_pred cccccCCCcHHHHHHhccHHHHHHHHhCchHHH-HHHHHHhcCchhhcceeecccchhHHHHHHHHHhhcccCCcccccc
Confidence 12333344332111110012222 123332 1334568899999999999999999998877665
Q ss_pred hhhhhhhhcCCCc--chhHHHHHHHHHHHHHHhhHHhhhchHHHHHHHHHHHhcc-CCCHHHHHHHHhcCccc
Q 006023 403 SRTAVNFSAGCQT--VVSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPG-LIDINEAINIYKVDKLD 472 (664)
Q Consensus 403 srS~v~~~~G~~T--~ls~iv~a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~-li~~~~~~~l~k~~~~d 472 (664)
..-.+-.. =+|- +-..+.++++++++.++.-|.=-.+=.+|+...+++-++- +. ..+ -+.||.+|..
T Consensus 350 gTymIPaa-IaKRPIpggAiLtg~~Ci~~av~GyPMdlavw~Pvl~vALlvGVflPLl-eAG-mqm~r~~k~s 419 (492)
T PF11840_consen 350 GTYMIPAA-IAKRPIPGGAILTGLLCIVAAVWGYPMDLAVWPPVLRVALLVGVFLPLL-EAG-MQMTRKGKTS 419 (492)
T ss_pred hhhhhhHH-HhcCCCCchHHHHHHHHHHHHHhcCcchhhhcccHHHHHHHHHHHHHHH-HHH-HHHHhcCCcc
Confidence 55444443 2333 5677889998888888776643333344566666663332 22 222 3566666643
No 32
>COG3113 Predicted NTP binding protein (contains STAS domain) [General function prediction only]
Probab=97.52 E-value=0.00056 Score=58.20 Aligned_cols=84 Identities=15% Similarity=0.154 Sum_probs=65.9
Q ss_pred EEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcC
Q 006023 541 TIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASP 620 (664)
Q Consensus 541 Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~ 620 (664)
-+.+.|+ |+=-..--+-+...++ .+....+-+|+++|.-+||+|+..|.++.+.++++|..+.+.++
T Consensus 13 tL~LsGe-L~r~tl~~lw~~r~~~------------~~~~~~~~idLs~v~rvDSaglALL~~~~~~~k~~g~~~~L~~~ 79 (99)
T COG3113 13 TLVLSGE-LDRDTLLPLWSQREAQ------------LKQLDTVRIDLSGVSRVDSAGLALLLHLIRLAKKQGNAVTLTGV 79 (99)
T ss_pred eEEEecc-ccHHHHHHHHHHHHHH------------ccccCeEEEehhhcceechHHHHHHHHHHHHHHHcCCeeEEecC
Confidence 4678888 6644333332222221 23347899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHCCCcccc
Q 006023 621 RWQVIHKLKSAKLLDRI 637 (664)
Q Consensus 621 ~~~v~~~L~~~g~~~~i 637 (664)
+++++...+..|+.+.+
T Consensus 80 p~~L~tLa~Ly~l~~~l 96 (99)
T COG3113 80 PEQLRTLAELYNLSDWL 96 (99)
T ss_pred cHHHHHHHHHhCcHhhh
Confidence 99999999999886554
No 33
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=91.88 E-value=4.9 Score=46.39 Aligned_cols=109 Identities=13% Similarity=0.067 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCcccccccchhhhhh-------hhcCC
Q 006023 341 LGQTAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVN-------FSAGC 413 (664)
Q Consensus 341 ~~~~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~-------~~~G~ 413 (664)
+..-+..++..+++.+-++++.+.. + ..++...|++-.+..++.++||+.+....-.-++.. ...|.
T Consensus 14 l~~Di~aGltv~~~~iP~~~ayA~l-a-----glpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~ 87 (563)
T TIGR00815 14 FKGDLMAGLTVGILLIPQAMAYAIL-A-----GLSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGL 87 (563)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH-c-----CCCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcC
Confidence 3344456677888888888886643 2 356777799999999999999998755332222211 11222
Q ss_pred C-cc---------hhHHHHHHHHHHHHHH-hhHHhhhchHHHHHHHHHHHhcc
Q 006023 414 Q-TV---------VSNIVMAITVLLSLEL-FTSLLYYTPIAILASIILSALPG 455 (664)
Q Consensus 414 ~-T~---------ls~iv~a~~~ll~ll~-l~~l~~~iP~~vLa~ili~~~~~ 455 (664)
. .. ...+.+|++.++..++ ++.+..++|.+|+.|.+--+++.
T Consensus 88 ~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~ 140 (563)
T TIGR00815 88 QYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAIT 140 (563)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHH
Confidence 2 21 5667777777777666 89999999999998876554443
No 34
>PF11964 SpoIIAA-like: SpoIIAA-like; InterPro: IPR021866 This family of proteins is functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 120 to 132 amino acids in length. This protein has a single completely conserved residue A that may be functionally important. ; PDB: 2Q3L_B 2OOK_A 3BL4_A.
Probab=91.73 E-value=0.14 Score=45.07 Aligned_cols=105 Identities=7% Similarity=-0.021 Sum_probs=63.7
Q ss_pred CEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEcc-CCCccchhHHHHHHHHHHHHHhCCCEEE
Q 006023 538 GILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMS-NSMNIDTSGILVLEELHKKLASNGIELV 616 (664)
Q Consensus 538 ~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s-~V~~IDssgl~~L~~l~~~l~~~gi~l~ 616 (664)
++..++++|. +.-.....+.+.+.+.+++ .+.-.+.+|++ .+..++..+.....++.....++=.++.
T Consensus 1 ~il~v~~~g~-~t~ed~~~~~~~~~~~~~~----------~~~~~ll~d~~~~~~~~~~~a~~~~~~~~~~~~~~~~r~A 69 (109)
T PF11964_consen 1 NILAVRVSGK-LTEEDYKELLPALEELIAD----------HGKIRLLVDLRRDFEGWSPEARWEDAKFGLKHLKHFRRIA 69 (109)
T ss_dssp S-EEEEEEEE-E-HHHHHHHHHHHHHHHTT----------SSSEEEEEEEC-CEEEEHHHHHHHHHHHHCCCCGGEEEEE
T ss_pred CEEEEEEeee-eCHHHHHHHHHHHHHHHhc----------CCceEEEEEecCccCCCCHHHHHHHHHhchhhhcccCEEE
Confidence 4678999999 8877777777777665442 33468999999 8888877665444433322222225777
Q ss_pred EEcCCHHHHHHHHHCCCccccCCcccc--cCHHHHHHHHh
Q 006023 617 MASPRWQVIHKLKSAKLLDRIGKGCVY--LSVAEAMEACL 654 (664)
Q Consensus 617 la~~~~~v~~~L~~~g~~~~i~~~~if--~tv~~Av~~~~ 654 (664)
+++.++-.+...+..+.... .+-++| .+.+||.+|.+
T Consensus 70 vV~~~~~~~~~~~~~~~~~~-~~~~~F~~~~~~~A~~WL~ 108 (109)
T PF11964_consen 70 VVGDSEWIRMIANFFAAFPP-IEVRYFPPDEEEEALAWLR 108 (109)
T ss_dssp EE-SSCCCHHHHHHHHHH-S-SEEEEE--SSHHHHHHHHC
T ss_pred EEECcHHHHHHHHHHHhcCC-CceEEECCCCHHHHHHHHc
Confidence 88766533333222222211 223799 99999999986
No 35
>PRK10720 uracil transporter; Provisional
Probab=91.04 E-value=1.5 Score=48.68 Aligned_cols=60 Identities=13% Similarity=0.001 Sum_probs=48.2
Q ss_pred HHHHHhHhHhHhhhcCcccccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHHhhHHhhhchH
Q 006023 379 EMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLYYTPI 442 (664)
Q Consensus 379 El~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~l~~l~~~iP~ 442 (664)
++...=.++=++++++++-++...+-.+-|...+++|+.++-+...+-.+.+.+ +..+|+
T Consensus 261 ~~~r~l~adGlatii~glfG~~p~tty~en~g~ia~T~v~sr~v~~~a~~~li~----lg~~pk 320 (428)
T PRK10720 261 GLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIIAIL----LSCVGK 320 (428)
T ss_pred cccchHhhhhHHHHHHHhcCCCCccccccccceeeecccchhHHHHHHHHHHHH----HHHHHH
Confidence 456677889999999999998888889999999999999999887755555533 445666
No 36
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=89.28 E-value=4.4 Score=46.51 Aligned_cols=107 Identities=20% Similarity=0.145 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCchHHHHHhHhHhHhhhcCcccccccchhhhh--hhhcCC----Cc--
Q 006023 344 TAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAV--NFSAGC----QT-- 415 (664)
Q Consensus 344 ~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v--~~~~G~----~T-- 415 (664)
-+..++..+++.+=++++.+.. .| .++-..|++-=++-++-++|||.|.-.+-..++. ...+.. .+
T Consensus 24 Dl~AGltva~valP~ama~a~~----aG--v~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~~~~~~g~ 97 (554)
T COG0659 24 DLLAGLTVAAVALPLAMAFAIA----AG--VPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLVETGL 97 (554)
T ss_pred HHHHHHHHHHHHhHHHHHHHHH----cC--CCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHHHHHHHHH
Confidence 3445667777888787776652 33 7899999999999999999999886532222111 111111 22
Q ss_pred ---chhHHHHHHHHHHHHHH-hhHHhhhchHHHHHHHHHHHhccC
Q 006023 416 ---VVSNIVMAITVLLSLEL-FTSLLYYTPIAILASIILSALPGL 456 (664)
Q Consensus 416 ---~ls~iv~a~~~ll~ll~-l~~l~~~iP~~vLa~ili~~~~~l 456 (664)
-.+.+.+|++.+++.++ ++.+..|+|.+|+.|.+--.++-+
T Consensus 98 ~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I 142 (554)
T COG0659 98 ALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILI 142 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHH
Confidence 23445556666655555 899999999999988775544443
No 37
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=89.14 E-value=0.64 Score=45.48 Aligned_cols=78 Identities=14% Similarity=0.305 Sum_probs=64.7
Q ss_pred CCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEc-----CCHHHHHHHHHCCCccccCCcccccCHHHHHHH
Q 006023 578 RTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMAS-----PRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEA 652 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~-----~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~ 652 (664)
..++-+.||+|++-++.-.++--=.+..+.+++++.++.++. .+..+.+.|++.||. +.++.+|.+.-.|.+.
T Consensus 5 ~~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~--v~eeei~tsl~aa~~~ 82 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD--VSEEEIFTSLPAARQY 82 (262)
T ss_pred cccceEEEeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC--ccHHHhcCccHHHHHH
Confidence 357899999999999988787777888899998999998873 345678889999993 4566799999999999
Q ss_pred HhccC
Q 006023 653 CLTSK 657 (664)
Q Consensus 653 ~~~~~ 657 (664)
+++++
T Consensus 83 ~~~~~ 87 (262)
T KOG3040|consen 83 LEENQ 87 (262)
T ss_pred HHhcC
Confidence 98765
No 38
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.03 E-value=0.85 Score=39.82 Aligned_cols=71 Identities=17% Similarity=0.117 Sum_probs=57.9
Q ss_pred EEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHCCCccccCCcccccCHHHHHHHHhc
Q 006023 583 VIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPR-----WQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLT 655 (664)
Q Consensus 583 vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~-----~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~ 655 (664)
+++|+.+|-+-+...+.-=.+..+.++++|+++++..-+ .+..++|+..|+. +.++.++.+-..+.++.++
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~--~~~~~i~ts~~~~~~~l~~ 76 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP--VDEDEIITSGMAAAEYLKE 76 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT----GGGEEEHHHHHHHHHHH
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC--CCcCEEEChHHHHHHHHHh
Confidence 579999999999888888899999999999999887433 5788899999985 4567899998888888876
No 39
>PRK11660 putative transporter; Provisional
Probab=87.21 E-value=30 Score=40.02 Aligned_cols=115 Identities=13% Similarity=0.124 Sum_probs=70.7
Q ss_pred ChhhhhhhHHHHHHHHHHHHHHHHHH----HHHhC--CCchhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHh
Q 006023 92 KASKFKSDLMAGLTLASLSIPQSIGY----ANLAK--LDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQ 165 (664)
Q Consensus 92 ~~~~l~~D~~aGltv~~~~iPq~~ay----a~lag--lpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~ 165 (664)
+++.+..-+...++++++..=+++.- +...| .++..=|.+-.++.++-++||+.+... -.+ .+.+.
T Consensus 274 ~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~~~~d~n~EL~a~G~aNi~~~~fgg~p~~~--s~s------rSa~n 345 (568)
T PRK11660 274 SWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHSANSELVGQGLGNIVAPFFGGITATA--AIA------RSAAN 345 (568)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHhHHHHHHHHhCcccccc--hHH------HHHHH
Confidence 55666666667777777766665533 33333 566677889999999999999965321 111 11222
Q ss_pred hhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHH
Q 006023 166 NVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIG 224 (664)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~ 224 (664)
...+- . .-..++++|++.++.-++ ++.+..++|.+++.|.+.-+|+.++
T Consensus 346 ~~aGa-r--------T~la~iv~a~~~ll~ll~-l~~ll~~iP~~vLa~ili~~~~~m~ 394 (568)
T PRK11660 346 VRAGA-T--------SPISAVIHALLVLLALLV-LAPLLSYLPLSAMAALLLMVAWNMS 394 (568)
T ss_pred HhcCC-C--------cHHHHHHHHHHHHHHHHH-HHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 11100 0 113445555554443333 6779999999999999988887654
No 40
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=86.48 E-value=23 Score=38.95 Aligned_cols=97 Identities=19% Similarity=0.230 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHH----HHHHhCCCc-----hhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHhhhcCCCCCh
Q 006023 104 LTLASLSIPQSIG----YANLAKLDP-----QYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQNVQDPAADP 174 (664)
Q Consensus 104 ltv~~~~iPq~~a----ya~laglpp-----~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~~~~~~~~~~ 174 (664)
++.+++..-++++ .+...|-++ .-++.+-.+++++-++||+.+.......+..... .+..
T Consensus 225 ~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~~p~t~~~~~~~~~~~-----tg~~------ 293 (406)
T TIGR03173 225 IIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNTFPYTSFSQNVGLVQL-----TGVK------ 293 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCCCCCcchhhhHHHHHH-----hCCC------
Confidence 4455555555444 444555332 2789999999999999998764433221111111 0100
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-hhhHHHhhchHHHHHHHHH
Q 006023 175 VAYRKLVFTVTFFAGVFQSVFGLF-RLGFLVDFLSHAAIVGFMA 217 (664)
Q Consensus 175 ~~~~~~~~~~t~l~Gv~~~~lg~l-rlg~l~~flp~~vi~Gf~~ 217 (664)
. + ....++|++.+++|++ +++.+..++|.||+.|.+.
T Consensus 294 -s--r---~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l 331 (406)
T TIGR03173 294 -S--R---YVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGL 331 (406)
T ss_pred -c--h---HhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 0 1 2346788888888887 5899999999999999554
No 41
>PF14213 DUF4325: Domain of unknown function (DUF4325)
Probab=84.85 E-value=5.9 Score=32.34 Aligned_cols=66 Identities=15% Similarity=0.222 Sum_probs=46.4
Q ss_pred cHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHH-HHHHHHHHHH--hCCCEEEEEcCCHHHHHHHH
Q 006023 553 NANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGIL-VLEELHKKLA--SNGIELVMASPRWQVIHKLK 629 (664)
Q Consensus 553 na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~-~L~~l~~~l~--~~gi~l~la~~~~~v~~~L~ 629 (664)
+...+++.+.+.+++. +.|+|||++|..+-+|=+. ++-.+.+++. ....++.+.|.++++.+.++
T Consensus 2 ~G~~~~~~i~~~l~~~------------~~V~lDF~gv~~~~ssFl~eafg~l~~~~~~~~~~~~l~~~~~~~~~~~~I~ 69 (74)
T PF14213_consen 2 DGERLRDEIEPALKEG------------EKVVLDFEGVESITSSFLNEAFGQLVREFGEEEIKKRLKFKNANESIKEMIK 69 (74)
T ss_pred ChHHHHHHHHHHHhcC------------CeEEEECCCcccccHHHHHHHHHHHHHHcCHHHHhheeEEecCCHHHHHHHH
Confidence 3567777777766532 3599999999888777654 3444444432 33578999999999998887
Q ss_pred H
Q 006023 630 S 630 (664)
Q Consensus 630 ~ 630 (664)
+
T Consensus 70 ~ 70 (74)
T PF14213_consen 70 R 70 (74)
T ss_pred H
Confidence 5
No 42
>PF09345 DUF1987: Domain of unknown function (DUF1987); InterPro: IPR018530 This family of proteins are functionally uncharacterised.
Probab=83.54 E-value=4.7 Score=35.10 Aligned_cols=71 Identities=15% Similarity=0.197 Sum_probs=56.4
Q ss_pred EEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHH---HhCCCEE
Q 006023 539 ILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKL---ASNGIEL 615 (664)
Q Consensus 539 i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l---~~~gi~l 615 (664)
--++++.|. =|=-|+..|-+-+.+|+++.-+ .+.+.+.+++ .+.|+++|..++|.++.+.+ .++|.++
T Consensus 9 ~g~l~i~Ge-SypEn~~~Fy~Pi~~wl~~Yl~-------~~~~~i~~~~-~L~YfNTSSsk~l~~i~~~Le~~~~~g~~V 79 (99)
T PF09345_consen 9 TGRLEISGE-SYPENAFAFYQPILDWLEAYLA-------EPNKPITFNF-KLSYFNTSSSKALMDIFDLLEDAAQKGGKV 79 (99)
T ss_pred CCEEEEecc-cCccCHHHHHHHHHHHHHHHHh-------CCCCcEEEEE-EEEEEecHhHHHHHHHHHHHHHHHhcCCcE
Confidence 357899999 8889999999999999987542 2346777787 58999999999999998888 4567666
Q ss_pred EEE
Q 006023 616 VMA 618 (664)
Q Consensus 616 ~la 618 (664)
.+-
T Consensus 80 ~v~ 82 (99)
T PF09345_consen 80 TVN 82 (99)
T ss_pred EEE
Confidence 543
No 43
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=80.96 E-value=9.2 Score=42.31 Aligned_cols=116 Identities=20% Similarity=0.270 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHHHHHHHH----HHHHhCCC----c--hhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHhhhc
Q 006023 99 DLMAGLTLASLSIPQSIG----YANLAKLD----P--QYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQNVQ 168 (664)
Q Consensus 99 D~~aGltv~~~~iPq~~a----ya~laglp----p--~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~~~~ 168 (664)
.+..=+.++++.+-++++ .+..+|-+ + .-++.+-.+++++-++||+.+.-........ +..-.
T Consensus 235 ~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~~p~t~~sen~g~-------~~~T~ 307 (415)
T TIGR00801 235 AILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGGFPNTTFAQNIGV-------IALTR 307 (415)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCCCCCcchhhhhee-------eeecC
Confidence 344445556666666554 44566653 2 3789999999999999998765443221110 00000
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHh-hhhHHHhhchHHHHHHHHHHHHHHHHHhhhccc
Q 006023 169 DPAADPVAYRKLVFTVTFFAGVFQSVFGLF-RLGFLVDFLSHAAIVGFMAGAAIVIGLQQLKGL 231 (664)
Q Consensus 169 ~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~l-rlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~~~ 231 (664)
. .-+ .+...+|++.+++|++ +++.+...+|.||+.|.....--.+..+.++.+
T Consensus 308 --~-----~sr---~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~~l 361 (415)
T TIGR00801 308 --V-----ASR---WVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGIRIL 361 (415)
T ss_pred --C-----Cch---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 001 2567788888898988 689999999999999877755555554444443
No 44
>COG5439 Uncharacterized conserved protein [Function unknown]
Probab=75.35 E-value=5.3 Score=33.85 Aligned_cols=44 Identities=14% Similarity=0.253 Sum_probs=38.0
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhC-CCEEEEEcCCH
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASN-GIELVMASPRW 622 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~-gi~l~la~~~~ 622 (664)
++...++|+.++.|++|||+..|..+.-+.+++ ++++++-|.+.
T Consensus 45 ~ps~mtinL~gL~FLNSSGInlLakftievRk~pd~~fvvrGs~~ 89 (112)
T COG5439 45 DPSEMTINLEGLEFLNSSGINLLAKFTIEVRKKPDTSFVVRGSKN 89 (112)
T ss_pred ChHHhEEecccceeecccchHHHHhhhhhhhcCCCceEEEecCCC
Confidence 457899999999999999999999999999876 78888876543
No 45
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=75.32 E-value=19 Score=40.03 Aligned_cols=60 Identities=18% Similarity=-0.033 Sum_probs=38.4
Q ss_pred chHHHHHhHhHhHhhhcCcccccccchhhhhhhhcC--CCcchhHHHHHHHHHHHHHHhhHHhhhchH
Q 006023 377 NKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAG--CQTVVSNIVMAITVLLSLELFTSLLYYTPI 442 (664)
Q Consensus 377 nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G--~~T~ls~iv~a~~~ll~ll~l~~l~~~iP~ 442 (664)
++++..--.++=++++++++-++... |....+.| +-|+..+-.....-.+.+. ++..+|+
T Consensus 274 ~~~l~rgi~~dGi~s~laglfg~~p~--tt~sqNvGvi~~TgV~SR~v~~~aa~ili----llgl~PK 335 (433)
T PRK11412 274 NTRYRRSFVATGFMTLITVPLAVIPF--SPFVSSIGLLTQTGDYRRRSFIYGSVMCL----LVALIPA 335 (433)
T ss_pred CcccccchhhccHHHHHHHhcCCCCC--CchhhhhhhhhhcCCchhHHHHHHHHHHH----HHHHHHH
Confidence 45677777888899999988775444 44444444 4677777666655544443 2445566
No 46
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=74.86 E-value=11 Score=41.28 Aligned_cols=123 Identities=11% Similarity=0.016 Sum_probs=52.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hhCCccCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhcCCC
Q 006023 339 PHLGQTAKIGLISAVVALTEAIAVGRSFAS----IKGYHLDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQ 414 (664)
Q Consensus 339 ~~~~~~~~~~~~~~iv~~~e~i~~~~~~a~----~~~~~~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~ 414 (664)
..+...+...++..+.++....++++...+ +++.+--.--|=.+.=++-++|+ .+.-+.+.+.+-.........|
T Consensus 232 ~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G~-~~~t~~~en~g~i~~t~v~Sr~ 310 (389)
T PF00860_consen 232 GAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFGT-SPTTTYSENAGGIAATGVASRR 310 (389)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT----EEE-HHHHHHHHHHTB--HH
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhcC-CCCccccccchhhhhhccccce
Confidence 345555555555555555555555554432 22333333334445555555554 3333333333333333333334
Q ss_pred cchhHHHHHHHH----HHHHHH-hhHHhh-hchHHHHHHHHHHHhccCCCHHHH
Q 006023 415 TVVSNIVMAITV----LLSLEL-FTSLLY-YTPIAILASIILSALPGLIDINEA 462 (664)
Q Consensus 415 T~ls~iv~a~~~----ll~ll~-l~~l~~-~iP~~vLa~ili~~~~~li~~~~~ 462 (664)
+.+.+.+.++++ -+.-++ .-|--- .=|..++.+.++..+++.++++++
T Consensus 311 ~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~ 364 (389)
T PF00860_consen 311 VGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDL 364 (389)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheeccc
Confidence 444444333332 222222 223222 335666666666666666554443
No 47
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=72.89 E-value=15 Score=37.92 Aligned_cols=124 Identities=17% Similarity=0.228 Sum_probs=79.5
Q ss_pred cccccccc-CCChhhhhhhHHHHHHHHHHHHHHHHHHHHHh------CCCchhhhhhhhhhhHHHhhccCCcccccchHH
Q 006023 82 FPILNWGR-NYKASKFKSDLMAGLTLASLSIPQSIGYANLA------KLDPQYGLYTSVIPPLIYALMGSSREIAIGPVA 154 (664)
Q Consensus 82 ~Pi~~wl~-~y~~~~l~~D~~aGltv~~~~iPq~~aya~la------glpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a 154 (664)
+|-.++-+ .++++.+..-+...++++++..-+++..+... ..++..=|.+-.++.++-++||+-+-- |..+
T Consensus 131 lp~~~~p~~~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~--~s~s 208 (280)
T PF00916_consen 131 LPPPSLPSFDISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKTGYRIDPNQELIALGLANIVSGLFGGMPGS--GSFS 208 (280)
T ss_pred CccccCcccccccccccccchhHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHhhhccccchhhcccccc--cccc
Confidence 55554432 66777777777788899999999988876532 256667799999999999999975321 1111
Q ss_pred HHHHHHHHHHhhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHH
Q 006023 155 VVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVI 223 (664)
Q Consensus 155 ~~sl~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i 223 (664)
- +.+....+ ... -.+++++|++.++.-++ ++.+..|+|.+++.|.+.-+|+.+
T Consensus 209 r------s~~~~~~G-a~t--------~~s~~~~~~~~l~~l~~-~~~~l~~iP~~~La~ili~~~~~l 261 (280)
T PF00916_consen 209 R------SAVNYRAG-ART--------RLSGLISALFVLLVLLF-LAPLLAYIPKAVLAAILIVVGISL 261 (280)
T ss_pred c------chHHHhcC-cce--------eehhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 11111110 000 12445556655444444 567999999999999988888764
No 48
>PRK09928 choline transport protein BetT; Provisional
Probab=72.74 E-value=1.6e+02 Score=34.76 Aligned_cols=30 Identities=20% Similarity=0.216 Sum_probs=26.7
Q ss_pred CCccchhHHHHHHHHHHHHHhCCCEEEEEc
Q 006023 590 SMNIDTSGILVLEELHKKLASNGIELVMAS 619 (664)
Q Consensus 590 V~~IDssgl~~L~~l~~~l~~~gi~l~la~ 619 (664)
-.|+|.++.-+++|+.++++++|.+..+..
T Consensus 546 ~~f~~~~~~pA~~~v~~el~~~g~~~~~~~ 575 (679)
T PRK09928 546 RRMLDTVCRPAMEEVAQELRLRGAYVELNE 575 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 357899999999999999999999988864
No 49
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=72.18 E-value=16 Score=40.65 Aligned_cols=35 Identities=17% Similarity=0.106 Sum_probs=19.6
Q ss_pred HHHHHHHHHHH-HHhCCCchhhhhhhhhhhHHHhhc
Q 006023 108 SLSIPQSIGYA-NLAKLDPQYGLYTSVIPPLIYALM 142 (664)
Q Consensus 108 ~~~iPq~~aya-~laglpp~~GLyss~v~~liy~l~ 142 (664)
+-.+=|..... .-+++|...|-..+++++++...-
T Consensus 64 iaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~ 99 (451)
T COG2233 64 IGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGG 99 (451)
T ss_pred HHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHh
Confidence 33344554444 223667777777777777666553
No 50
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=69.03 E-value=27 Score=38.81 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHH----HHHhC--CCc--hhhhhhhhhhhHHHhhccCCcccccchHHHHHHHHHHHHhhhcCCCCChh
Q 006023 104 LTLASLSIPQSIGY----ANLAK--LDP--QYGLYTSVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQNVQDPAADPV 175 (664)
Q Consensus 104 ltv~~~~iPq~~ay----a~lag--lpp--~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~~~~~~~~~~~ 175 (664)
+..+++..-++++- +...| .++ .-|+.+-.+++++-++||+++....+-.....- ..+
T Consensus 253 ~~~~lv~~~esiG~~~a~~~~~~~~~~~~i~r~l~adGl~t~~agl~g~~p~tt~~en~g~i~-----~T~--------- 318 (429)
T TIGR03616 253 APVALILVAENLGHFKAVAGMTGRNLDPYMGRAFVGDGLATMLSGSVGGTGVTTYAENIGVMA-----VTK--------- 318 (429)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhCCCCCchhccchhhhhHHHHHHHhcCCCCCcceeeeeeeee-----ecC---------
Confidence 44445555555543 33444 334 378999999999999999876554322110000 000
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHh-hhhHHHhhchHHHHHHHHHHHHHHHHHhhhc
Q 006023 176 AYRKLV-FTVTFFAGVFQSVFGLF-RLGFLVDFLSHAAIVGFMAGAAIVIGLQQLK 229 (664)
Q Consensus 176 ~~~~~~-~~~t~l~Gv~~~~lg~l-rlg~l~~flp~~vi~Gf~~g~gl~i~~~Ql~ 229 (664)
++ -.+...+|++.+++|++ |++.+...+|.||++|.+...--.+..+.++
T Consensus 319 ----v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~ 370 (429)
T TIGR03616 319 ----VYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGAR 370 (429)
T ss_pred ----cchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11 12445678888888888 4899999999999999988666666666665
No 51
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=67.49 E-value=48 Score=30.38 Aligned_cols=93 Identities=17% Similarity=0.141 Sum_probs=58.7
Q ss_pred CCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCC--
Q 006023 536 TPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGI-- 613 (664)
Q Consensus 536 ~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi-- 613 (664)
..|..|+..... .+.+.+-+...+ .+.+.+.+ +..|.+-...+.++.+.++++|.
T Consensus 28 ~~GfeVi~lg~~----~s~e~~v~aa~e--------------~~adii~i-----Ssl~~~~~~~~~~~~~~L~~~g~~~ 84 (132)
T TIGR00640 28 DLGFDVDVGPLF----QTPEEIARQAVE--------------ADVHVVGV-----SSLAGGHLTLVPALRKELDKLGRPD 84 (132)
T ss_pred hCCcEEEECCCC----CCHHHHHHHHHH--------------cCCCEEEE-----cCchhhhHHHHHHHHHHHHhcCCCC
Confidence 456777776654 334444443322 23556665 56778888889999999998753
Q ss_pred EEEEEc--CCHHHHHHHHHCCCccccCCcccccCHHHHHHHHh
Q 006023 614 ELVMAS--PRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACL 654 (664)
Q Consensus 614 ~l~la~--~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~ 654 (664)
-.++++ ..++-.+.|+..|+.+.++.. .+++|-+++..
T Consensus 85 i~vivGG~~~~~~~~~l~~~Gvd~~~~~g---t~~~~i~~~l~ 124 (132)
T TIGR00640 85 ILVVVGGVIPPQDFDELKEMGVAEIFGPG---TPIPESAIFLL 124 (132)
T ss_pred CEEEEeCCCChHhHHHHHHCCCCEEECCC---CCHHHHHHHHH
Confidence 235555 455567789999998877543 35555555544
No 52
>PF13788 DUF4180: Domain of unknown function (DUF4180)
Probab=66.20 E-value=94 Score=27.77 Aligned_cols=101 Identities=12% Similarity=0.041 Sum_probs=68.5
Q ss_pred CCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCC--ccchhHHHHHHHHHHHHHhCCCE
Q 006023 537 PGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSM--NIDTSGILVLEELHKKLASNGIE 614 (664)
Q Consensus 537 ~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~--~IDssgl~~L~~l~~~l~~~gi~ 614 (664)
+++.|..+.+...--.+.+...+-+....+ .+...+++|-+.++ |.|-+. +.--++.+++.+.+++
T Consensus 4 ~~~~v~~~~s~~~~i~~~qdalDLi~~~~~-----------~~~~~i~l~~~~l~~dFF~L~T-glAGeiLQKf~NY~ik 71 (113)
T PF13788_consen 4 NGIRVAEVSSDEPLISDEQDALDLIGTAYE-----------HGADRIILPKEALSEDFFDLRT-GLAGEILQKFVNYRIK 71 (113)
T ss_pred CCeEEEEEeCCCCeecchhHHHHHHHHHHH-----------cCCCEEEEEhHHCCHHHHHhhc-chHHHHHHHHHhhcee
Confidence 456666665442455555665555554422 35689999987765 555544 4566888899999999
Q ss_pred EEEEc------CCHHHHHHHHHCCCccccCCcccccCHHHHHHH
Q 006023 615 LVMAS------PRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEA 652 (664)
Q Consensus 615 l~la~------~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~ 652 (664)
+.+++ .+...++....++=-+.+ ++++|.+||+++
T Consensus 72 lAivGD~s~~~~S~~l~dfi~EsN~G~~~---~F~~~~~eA~~~ 112 (113)
T PF13788_consen 72 LAIVGDFSAYATSKSLRDFIYESNRGNHF---FFVPDEEEAIAW 112 (113)
T ss_pred EEEEEcccccccchhHHHHHHHhcCCCeE---EEECCHHHHHhh
Confidence 99983 455667766666665544 799999999986
No 53
>PRK10444 UMP phosphatase; Provisional
Probab=65.79 E-value=14 Score=37.73 Aligned_cols=73 Identities=15% Similarity=0.243 Sum_probs=53.9
Q ss_pred cEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCC-----HHHHHHHHHCCCccccCCcccccCHHHHHHHHhc
Q 006023 581 QAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPR-----WQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLT 655 (664)
Q Consensus 581 ~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~-----~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~ 655 (664)
+.+++|+.++-+-+-.-+.--.+..+.++++|++++++.-+ .+..+.|++.|+. +.++.++.+-..+.++..+
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~--~~~~~i~ts~~~~~~~L~~ 79 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD--VPDSVFYTSAMATADFLRR 79 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC--CCHhhEecHHHHHHHHHHh
Confidence 67899999988776555555668888999999999888433 3567788888882 4556788776666666654
No 54
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=60.83 E-value=17 Score=37.78 Aligned_cols=74 Identities=16% Similarity=0.103 Sum_probs=54.9
Q ss_pred ccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcC-----CHHHHHHHHHCCCccccCCcccccCHHHHHHHHh
Q 006023 580 IQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASP-----RWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACL 654 (664)
Q Consensus 580 ~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~-----~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~ 654 (664)
.+.+++|+.++-+-+..-+.-..+..++++++|++++++.- ..+..+.|++.|+... .++++.+..-+.++.+
T Consensus 2 ~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~--~~~i~ts~~~~~~~l~ 79 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL--AEQLFSSALCAARLLR 79 (279)
T ss_pred ccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC--hhhEecHHHHHHHHHH
Confidence 57899999998876666555567888899999999987743 2345578888998533 4678888777766665
Q ss_pred c
Q 006023 655 T 655 (664)
Q Consensus 655 ~ 655 (664)
+
T Consensus 80 ~ 80 (279)
T TIGR01452 80 Q 80 (279)
T ss_pred h
Confidence 4
No 55
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=60.71 E-value=24 Score=36.85 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=62.2
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcC-----CHHHHHHHHHCCCccccCCcccccCHHHHHHHH
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASP-----RWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEAC 653 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~-----~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~ 653 (664)
...++|+||.+|--.-...+.--.+..+.+++.|.++.++.- +++-.+++++.|+.. ++++.+|.+-..+..+.
T Consensus 21 ~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-v~e~~i~ssa~~~a~yl 99 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-VKEENIFSSAYAIADYL 99 (306)
T ss_pred hcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-cCcccccChHHHHHHHH
Confidence 467999999999887777777778889999999999988743 345677888899954 88889999988888877
Q ss_pred hccC
Q 006023 654 LTSK 657 (664)
Q Consensus 654 ~~~~ 657 (664)
+..+
T Consensus 100 k~~~ 103 (306)
T KOG2882|consen 100 KKRK 103 (306)
T ss_pred HHhC
Confidence 5433
No 56
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=58.79 E-value=1.9e+02 Score=31.87 Aligned_cols=105 Identities=19% Similarity=0.170 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCccCCch-------HHHHHhHhHhHhhhcCcccccccchhhhhhhh-cC-CC
Q 006023 344 TAKIGLISAVVALTEAIAVGRSFASIKGYHLDGNK-------EMVAMGFMNIVGSLTSCYVATGSFSRTAVNFS-AG-CQ 414 (664)
Q Consensus 344 ~~~~~~~~~iv~~~e~i~~~~~~a~~~~~~~d~nq-------El~a~G~aNiv~s~fg~~p~t~s~srS~v~~~-~G-~~ 414 (664)
.+..+++..++++..+.++.-.-++.-| .|..| -.++.|++.+.=|..-=+|...+.|--....- ++ ..
T Consensus 23 ~~~aG~va~lvg~~~~~~iv~~a~~~~g--~s~aq~~swl~a~~~~~Gl~ti~lS~~~r~Pi~~awStPGaAll~~~~~~ 100 (395)
T TIGR00843 23 TLIAGFLAVLIGYAGPAAIFFQAAIKAG--ASTAMIIGWITAIGIAAAVSGIFLSIRFKTPVLTAWSAPGAALLVTGFPG 100 (395)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeecCchHHHHHHHhcCC
Confidence 4556677788888887766544444333 34444 45778888888888888998888772221111 11 11
Q ss_pred cchhH-----HHHHHHHHHHHH--HhhHHhhhchHHHHHHHHH
Q 006023 415 TVVSN-----IVMAITVLLSLE--LFTSLLYYTPIAILASIIL 450 (664)
Q Consensus 415 T~ls~-----iv~a~~~ll~ll--~l~~l~~~iP~~vLa~ili 450 (664)
-.++. +++++++++..+ .+..+.++||.++.++++-
T Consensus 101 ~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLA 143 (395)
T TIGR00843 101 ISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLA 143 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 23444 444444444333 3677889999999999883
No 57
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=58.20 E-value=51 Score=35.79 Aligned_cols=44 Identities=14% Similarity=0.316 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHh---hhhHHHh-hchHHHHHHHHHHHHHHHHH
Q 006023 182 FTVTFFAGVFQSVFGLF---RLGFLVD-FLSHAAIVGFMAGAAIVIGL 225 (664)
Q Consensus 182 ~~~t~l~Gv~~~~lg~l---rlg~l~~-flp~~vi~Gf~~g~gl~i~~ 225 (664)
...|+...+..+++|.+ |+.++-+ ++|+||++|++.++-.....
T Consensus 7 ~~~tl~~a~lllllG~~l~kki~fl~k~~IPepVvgG~i~ail~~~~~ 54 (404)
T COG0786 7 ALETLILAILLLLLGRFLVKKIKFLKKYCIPEPVVGGLIFAILLLLLH 54 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHccCCcchHHHHHHHHHHHHHH
Confidence 45667777777888866 4566666 79999999999987776653
No 58
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=56.02 E-value=25 Score=35.93 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=51.9
Q ss_pred cEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEc-----CCHHHHHHHHHCCCccccCCcccccCHHHHHHHHhc
Q 006023 581 QAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMAS-----PRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLT 655 (664)
Q Consensus 581 ~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~-----~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~ 655 (664)
+.+++|+.++-+-+..-+.-=.+..++++++|++++++. ...++.++|+..|+. +..+.++.+-..+.++..+
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~--~~~~~iit~~~~~~~~l~~ 79 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP--ATLETVFTASMATADYMND 79 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC--CChhhEeeHHHHHHHHHHh
Confidence 578888888766544433334678888889999998884 245677889988884 3456788887776676654
No 59
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=55.40 E-value=75 Score=29.29 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=45.1
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhC---CCEEEEEcCC-------HHHHHHHHHCCCccccCCcccccCHHH
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASN---GIELVMASPR-------WQVIHKLKSAKLLDRIGKGCVYLSVAE 648 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~---gi~l~la~~~-------~~v~~~L~~~g~~~~i~~~~if~tv~~ 648 (664)
+++.|.+-+.. .+....+.++.+++++. ++.+.+-+.- ++..+.+++.|+...++++. +.++
T Consensus 54 ~~d~V~lS~~~-----~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~~~vf~~~~---~~~~ 125 (137)
T PRK02261 54 DADAILVSSLY-----GHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGFDRVFPPGT---DPEE 125 (137)
T ss_pred CCCEEEEcCcc-----ccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHHHHHHHcCCCEEECcCC---CHHH
Confidence 45677664433 35556667777777776 6777777653 46778999999855444322 6777
Q ss_pred HHHHHhc
Q 006023 649 AMEACLT 655 (664)
Q Consensus 649 Av~~~~~ 655 (664)
.++++++
T Consensus 126 i~~~l~~ 132 (137)
T PRK02261 126 AIDDLKK 132 (137)
T ss_pred HHHHHHH
Confidence 7777664
No 60
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=54.57 E-value=25 Score=36.13 Aligned_cols=74 Identities=15% Similarity=0.254 Sum_probs=53.8
Q ss_pred cEEEEEccCCCccchh----HHHHHHHHHHHHHhCCCEEEEEcC---C--HHHHHHHHHCCCccccCCcccccCHHHHHH
Q 006023 581 QAVIIDMSNSMNIDTS----GILVLEELHKKLASNGIELVMASP---R--WQVIHKLKSAKLLDRIGKGCVYLSVAEAME 651 (664)
Q Consensus 581 ~~vILD~s~V~~IDss----gl~~L~~l~~~l~~~gi~l~la~~---~--~~v~~~L~~~g~~~~i~~~~if~tv~~Av~ 651 (664)
+.+++|+.++-+-+.. .+..=.+..++++++|++++++.- + +++.+.|+..|+. +.++.++.+-..+.+
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~--~~~~~i~ts~~~~~~ 79 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD--ISEDEVFTPAPAARQ 79 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC--CCHHHeEcHHHHHHH
Confidence 6889999888765544 344556677778889999988853 1 3577889999984 566788888777777
Q ss_pred HHhcc
Q 006023 652 ACLTS 656 (664)
Q Consensus 652 ~~~~~ 656 (664)
+++++
T Consensus 80 ~l~~~ 84 (257)
T TIGR01458 80 LLEEK 84 (257)
T ss_pred HHHhc
Confidence 76543
No 61
>PLN02645 phosphoglycolate phosphatase
Probab=53.49 E-value=49 Score=34.99 Aligned_cols=74 Identities=22% Similarity=0.147 Sum_probs=52.4
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcC-----CHHHHHHHHHCCCccccCCcccccCHHHHHHHH
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASP-----RWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEAC 653 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~-----~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~ 653 (664)
+.+.+++|+.++-+-+..-+.--.+..++++++|++++++.- ..++.+.|+..|+. +..+.++.+...+....
T Consensus 27 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~--~~~~~I~ts~~~~~~~l 104 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN--VTEEEIFSSSFAAAAYL 104 (311)
T ss_pred hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC--CChhhEeehHHHHHHHH
Confidence 368999999998877655555557888889999999988743 24566778888884 33456777755444444
Q ss_pred h
Q 006023 654 L 654 (664)
Q Consensus 654 ~ 654 (664)
+
T Consensus 105 ~ 105 (311)
T PLN02645 105 K 105 (311)
T ss_pred H
Confidence 4
No 62
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=52.77 E-value=2.8e+02 Score=31.86 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=27.2
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHCCCcc
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLD 635 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~~g~~~ 635 (664)
+.+.+++|-.. +..+++++.|.+.+..++.+ .+.|+++|+.+
T Consensus 440 g~~vvvId~d~-------------~~~~~~~~~g~~~i~GD~~~--~~~L~~a~i~~ 481 (558)
T PRK10669 440 GIPLVVIETSR-------------TRVDELRERGIRAVLGNAAN--EEIMQLAHLDC 481 (558)
T ss_pred CCCEEEEECCH-------------HHHHHHHHCCCeEEEcCCCC--HHHHHhcCccc
Confidence 35788888541 33455566788877777664 55677777743
No 63
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=52.37 E-value=43 Score=37.69 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=62.1
Q ss_pred CCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHCCCccccCCcccccCHHHHHHHHhc
Q 006023 578 RTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLT 655 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~ 655 (664)
.+++.|||| ++=.+.|+.|-.+|.+...+.|++|+.+++..-+|.+....++.=+.+ -|.-+.|-..||-+++...
T Consensus 489 G~P~lvVLD-EPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~-~G~~~~FG~r~eVLa~~~~ 564 (580)
T COG4618 489 GDPFLVVLD-EPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQ-DGRIAAFGPREEVLAKVLR 564 (580)
T ss_pred CCCcEEEec-CCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeec-CChHHhcCCHHHHHHHhcC
Confidence 467899999 556789999999999999999999999999999998876665543332 2455789999999988765
No 64
>TIGR00210 gltS sodium--glutamate symport carrier (gltS).
Probab=50.56 E-value=1.1e+02 Score=33.60 Aligned_cols=40 Identities=15% Similarity=0.410 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHh---hhhHHHh-hchHHHHHHHHHHHHHHHH
Q 006023 185 TFFAGVFQSVFGLF---RLGFLVD-FLSHAAIVGFMAGAAIVIG 224 (664)
Q Consensus 185 t~l~Gv~~~~lg~l---rlg~l~~-flp~~vi~Gf~~g~gl~i~ 224 (664)
|+...++.+++|.. |..++.| ++|.||++|++.++.+.+.
T Consensus 8 t~~la~~lLllG~~Lr~kv~~Lqk~~IPapViGGll~al~l~l~ 51 (398)
T TIGR00210 8 TLVVAILVLLLGRYLVKKIKFLKSFNIPEPVVGGVLVALALLLI 51 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 44444555555544 3566666 8999999999998777665
No 65
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=50.46 E-value=1.9e+02 Score=25.86 Aligned_cols=68 Identities=13% Similarity=0.084 Sum_probs=46.9
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhC---CCEEEEEc-CCHHHHHHHHHCCCccccCCcccccCHHHHHHHHh
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASN---GIELVMAS-PRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACL 654 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~---gi~l~la~-~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~ 654 (664)
+.+.|.+-++ |......+.++.++++++ ++.+.+.+ ..++..+.++..|+.+.++ -=.+.++.+..++
T Consensus 50 ~~d~V~iS~~-----~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~~~~---~~~~~~~~~~~~~ 121 (122)
T cd02071 50 DVDVIGLSSL-----SGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAEIFG---PGTSIEEIIDKIR 121 (122)
T ss_pred CCCEEEEccc-----chhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCEEEC---CCCCHHHHHHHHh
Confidence 4677777544 566667788888888887 45555554 4455678899999877764 3356677776654
No 66
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=49.91 E-value=90 Score=30.77 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=47.5
Q ss_pred EEEEEEcCccee---eccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEE
Q 006023 539 ILTIRINSALFC---FANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIEL 615 (664)
Q Consensus 539 i~Ivrl~g~~L~---F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l 615 (664)
+.+++++|. +. -.....+.+.+.+.-+ .++++.|+|+... ..-|....+.+.+..+.+++.+..+
T Consensus 2 v~vi~i~g~-i~~~~~~~~~~l~~~l~~a~~----------d~~i~~ivl~~~s-~Gg~~~~~~~i~~~i~~~~~~~kpv 69 (208)
T cd07023 2 IAVIDIEGT-ISDGGGIGADSLIEQLRKARE----------DDSVKAVVLRINS-PGGSVVASEEIYREIRRLRKAKKPV 69 (208)
T ss_pred EEEEEEEEE-EcCCCCCCHHHHHHHHHHHHh----------CCCCcEEEEEEEC-CCCCHHHHHHHHHHHHHHHhcCCcE
Confidence 678999999 98 5677777777766432 2568999998865 4457777777777777777755555
Q ss_pred E
Q 006023 616 V 616 (664)
Q Consensus 616 ~ 616 (664)
+
T Consensus 70 i 70 (208)
T cd07023 70 V 70 (208)
T ss_pred E
Confidence 4
No 67
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=48.78 E-value=50 Score=34.68 Aligned_cols=60 Identities=20% Similarity=0.274 Sum_probs=47.6
Q ss_pred CCccEEEEEccCCCccchhHH----HHHHHHHHHHHhCCCEEEEEc--CCHHHHHHHHHCCCcccc
Q 006023 578 RTIQAVIIDMSNSMNIDTSGI----LVLEELHKKLASNGIELVMAS--PRWQVIHKLKSAKLLDRI 637 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl----~~L~~l~~~l~~~gi~l~la~--~~~~v~~~L~~~g~~~~i 637 (664)
+..+.+++|+.+--.=|.--+ ....+..++++++|+.+.++. .++.+.+.|+..|+.+.+
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YF 189 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYF 189 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCccc
Confidence 457899999987655554432 577889999999999999996 677888999999997543
No 68
>PRK11475 DNA-binding transcriptional activator BglJ; Provisional
Probab=48.71 E-value=65 Score=31.91 Aligned_cols=73 Identities=18% Similarity=0.210 Sum_probs=44.1
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcC-C-H-HHHHHHHHCCCccccCCcccccCHHHHHHHH
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASP-R-W-QVIHKLKSAKLLDRIGKGCVYLSVAEAMEAC 653 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~-~-~-~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~ 653 (664)
++..+++|+..+..=|..|++.++++.+..- +.++++... . + .+.+.+...|....+.++.=...+-+|++..
T Consensus 37 ~pd~vl~dl~d~~mp~~~Gl~~~~~l~~~~p--~~~iIvlt~~~~~~~~~~~~~~~Ga~gyl~K~~~~~eL~~aI~~v 112 (207)
T PRK11475 37 SFSAVIFSLSAMRSERREGLSCLTELAIKFP--RMRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEILQQELFLS 112 (207)
T ss_pred CCCEEEeeccccCCCCCCHHHHHHHHHHHCC--CCCEEEEeCCCCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHH
Confidence 3578988888776667779998888876543 456554433 2 2 2445565667666655443334445555543
No 69
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=48.06 E-value=86 Score=31.07 Aligned_cols=69 Identities=12% Similarity=0.105 Sum_probs=43.7
Q ss_pred CEEEEEEcCcceeeccH-------HHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHh
Q 006023 538 GILTIRINSALFCFANA-------NFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLAS 610 (664)
Q Consensus 538 ~i~Ivrl~g~~L~F~na-------~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~ 610 (664)
+|.|+.+.|+ |.-.+. +.+.+.+.+.- +.++++.|+|+... ...|...+..+.+..+.+++
T Consensus 1 ~i~v~~~~g~-i~~~~~~~~~~~~~~l~~~l~~a~----------~d~~v~~ivL~~~s-~Gg~~~~~~~~~~~l~~~~~ 68 (211)
T cd07019 1 SIGVVFANGA-IVDGEETQGNVGGDTTAAQIRDAR----------LDPKVKAIVLRVNS-PGGSVTASEVIRAELAAARA 68 (211)
T ss_pred CEEEEEEEEE-EeCCCCCCCccCHHHHHHHHHHHh----------hCCCceEEEEEEcC-CCcCHHHHHHHHHHHHHHHh
Confidence 4667777777 655543 34444444322 23678999998654 55777777777777777777
Q ss_pred CCCEEEEE
Q 006023 611 NGIELVMA 618 (664)
Q Consensus 611 ~gi~l~la 618 (664)
.+..++-+
T Consensus 69 ~~kpVia~ 76 (211)
T cd07019 69 AGKPVVVS 76 (211)
T ss_pred CCCCEEEE
Confidence 66655443
No 70
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=45.13 E-value=70 Score=28.96 Aligned_cols=53 Identities=25% Similarity=0.359 Sum_probs=41.5
Q ss_pred HHHHHHhCCCEEEEE-cCCHHHHHHHHHCCCccccCCcccccCHHHHHHHHhccCcc
Q 006023 604 LHKKLASNGIELVMA-SPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSKFA 659 (664)
Q Consensus 604 l~~~l~~~gi~l~la-~~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~~~~~ 659 (664)
+.+.++++|+++++| +..+.-...|+..|+.-..++. .|++||++.+.+-+..
T Consensus 57 ~a~~l~~~gvdvvi~~~iG~~a~~~l~~~GIkv~~~~~---~~V~e~i~~~~~g~l~ 110 (121)
T COG1433 57 IAELLVDEGVDVVIASNIGPNAYNALKAAGIKVYVAPG---GTVEEAIKAFLEGELE 110 (121)
T ss_pred HHHHHHHcCCCEEEECccCHHHHHHHHHcCcEEEecCC---CCHHHHHHHHhcCCcc
Confidence 566778899999998 5688999999999995444432 8999999988765543
No 71
>COG0573 PstC ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]
Probab=44.77 E-value=4.1e+02 Score=28.18 Aligned_cols=36 Identities=25% Similarity=0.502 Sum_probs=27.3
Q ss_pred ccccc-----CCCh-hhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 006023 85 LNWGR-----NYKA-SKFKSDLMAGLTLASLSIPQSIGYANL 120 (664)
Q Consensus 85 ~~wl~-----~y~~-~~l~~D~~aGltv~~~~iPq~~aya~l 120 (664)
.+|=| +|.. .-+.+-++.-+...++++|-|++.|..
T Consensus 64 ~~W~p~~~~~~~G~l~~i~GTli~s~iA~liAvP~gi~~Aif 105 (310)
T COG0573 64 TEWNPTNAQPQYGALPPIAGTLITSLIALLIAVPVGIGTAIF 105 (310)
T ss_pred CccCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 45666 4554 566777887888889999999999873
No 72
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=44.46 E-value=1.1e+02 Score=30.47 Aligned_cols=36 Identities=14% Similarity=0.385 Sum_probs=25.1
Q ss_pred CCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEE
Q 006023 578 RTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIEL 615 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l 615 (664)
++++.|+||..... -|..+...+.+..+++++ +..+
T Consensus 41 ~~i~~Vvl~~~s~g-g~~~~~~~l~~~l~~~~~-~KpV 76 (214)
T cd07022 41 PDVRAIVLDIDSPG-GEVAGVFELADAIRAARA-GKPI 76 (214)
T ss_pred CCCcEEEEEEeCCC-CcHHHHHHHHHHHHHHhc-CCCE
Confidence 57899999986643 467777777777777765 4443
No 73
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=44.00 E-value=59 Score=33.72 Aligned_cols=77 Identities=14% Similarity=0.140 Sum_probs=58.7
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCC----HH-HHHHHHHCCCccccCCcccccCHHHHHHHH
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPR----WQ-VIHKLKSAKLLDRIGKGCVYLSVAEAMEAC 653 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~----~~-v~~~L~~~g~~~~i~~~~if~tv~~Av~~~ 653 (664)
+.+.+++|+-+|-+-+...+.-=.+..+.++++|+++++..-+ ++ +.++|+..+..+. ..++++.|-+-+.+.+
T Consensus 7 ~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~-~~~~i~TS~~at~~~l 85 (269)
T COG0647 7 KYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDV-TPDDIVTSGDATADYL 85 (269)
T ss_pred hcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCC-CHHHeecHHHHHHHHH
Confidence 3578999999999999999999999999999999999877322 33 6677777444332 3457888877667766
Q ss_pred hcc
Q 006023 654 LTS 656 (664)
Q Consensus 654 ~~~ 656 (664)
.++
T Consensus 86 ~~~ 88 (269)
T COG0647 86 AKQ 88 (269)
T ss_pred Hhh
Confidence 653
No 74
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=43.96 E-value=1.1e+02 Score=30.10 Aligned_cols=58 Identities=17% Similarity=0.224 Sum_probs=40.3
Q ss_pred EEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHH
Q 006023 539 ILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLA 609 (664)
Q Consensus 539 i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~ 609 (664)
|.+++++|. +. .+.+.+.+.+.+.-+ .++++.|+|+... ..-|....+.+.+..++++
T Consensus 2 v~vi~i~g~-i~-~s~~~l~~~l~~a~~----------d~~i~~vvl~~~s-~Gg~~~~~~~l~~~i~~~~ 59 (207)
T TIGR00706 2 IAILPVSGA-IA-VSPEDFDKKIKRIKD----------DKSIKALLLRINS-PGGTVVASEEIYEKLKKLK 59 (207)
T ss_pred EEEEEEEEE-Ee-cCHHHHHHHHHHHhh----------CCCccEEEEEecC-CCCCHHHHHHHHHHHHHhc
Confidence 679999999 98 677777777766432 2568999998764 3346666666666555555
No 75
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication. DnaA is an ATP- and DNA-binding protein. It binds specifically to 9 bp nucleotide repeats known as dnaA boxes which are found in the chromosome origin of replication (oriC). DnaA is a protein of about 50 kDa that contains two conserved regions: the first is located in the N-terminal half and corresponds to the ATP-binding domain, the second is located in the C-terminal half and could be involved in DNA-binding. The protein may also bind the RNA polymerase beta subunit, the dnaB and dnaZ proteins, and the groE gene products (chaperonins) [].; PDB: 2KJQ_A 2Z4S_A 2Z4R_C 2HCB_B 3R8F_C 1L8Q_A 3SC3_B 3BOS_A.
Probab=43.21 E-value=1e+02 Score=30.68 Aligned_cols=69 Identities=17% Similarity=0.186 Sum_probs=44.6
Q ss_pred eeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhH--HHHHHHHHHHHHhCCCEEEEEc
Q 006023 549 FCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSG--ILVLEELHKKLASNGIELVMAS 619 (664)
Q Consensus 549 L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssg--l~~L~~l~~~l~~~gi~l~la~ 619 (664)
..+.+++.|.+.+...+++.+-..=.........++|| .++.+.... .+.|-++.+.+.++|.+++++.
T Consensus 67 v~y~~~~~f~~~~~~~~~~~~~~~~~~~~~~~DlL~iD--Di~~l~~~~~~q~~lf~l~n~~~~~~k~li~ts 137 (219)
T PF00308_consen 67 VVYLSAEEFIREFADALRDGEIEEFKDRLRSADLLIID--DIQFLAGKQRTQEELFHLFNRLIESGKQLILTS 137 (219)
T ss_dssp EEEEEHHHHHHHHHHHHHTTSHHHHHHHHCTSSEEEEE--TGGGGTTHHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred ceeecHHHHHHHHHHHHHcccchhhhhhhhcCCEEEEe--cchhhcCchHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 33444556655555554432110000112457899999 777776654 7899999999999999999997
No 76
>PHA00736 hypothetical protein
Probab=43.13 E-value=1.5e+02 Score=23.52 Aligned_cols=68 Identities=16% Similarity=0.331 Sum_probs=43.4
Q ss_pred HHHHHHHhCCCchhhhhh-hhhhhHHHhhccCCcccccchHHHHHHHHHHHHhhhcCCCCChhHHHHHHHHHHHHHHHH
Q 006023 114 SIGYANLAKLDPQYGLYT-SVIPPLIYALMGSSREIAIGPVAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVF 191 (664)
Q Consensus 114 ~~aya~laglpp~~GLys-s~v~~liy~l~Gss~~~~~Gp~a~~sl~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~ 191 (664)
+++.|+-.|+.|+.+..- -..-++.|-.-|..+.+..|-.+..+++.-..+. .+|..+....+++|.+
T Consensus 4 aislal~tglgpvi~viiil~mmgltykmagkipaii~giastf~lmfmdflp----------lfwgi~vifgliag~v 72 (79)
T PHA00736 4 AISLALQTGLGPVIAIIIILAMMGLTYKMAGKIPAILVGIASTFTLMFMDFLP----------LFWGITVIFGLIAGLV 72 (79)
T ss_pred HHHHHHHcCCccHHHHHHHHHHHhhHHHHhCCccHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHh
Confidence 567777889999877543 3345677777888887777777766666543332 2355555555555543
No 77
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=42.15 E-value=76 Score=32.02 Aligned_cols=71 Identities=11% Similarity=0.042 Sum_probs=49.3
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEE-cCCHH---HHHHHHHCCCcc-ccCCcccccCHHHHHH
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMA-SPRWQ---VIHKLKSAKLLD-RIGKGCVYLSVAEAME 651 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la-~~~~~---v~~~L~~~g~~~-~i~~~~if~tv~~Av~ 651 (664)
+.+.+++|+.++-.-...-..--.++.++++++|+++.++ |...+ ..++|+..|+.. .+ +.++.+-+.+.+
T Consensus 7 ~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~--~~Ii~s~~~~~~ 82 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP--EMIISSGEIAVQ 82 (242)
T ss_pred cCCEEEEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc--ceEEccHHHHHH
Confidence 4689999998887765555667788889999999999886 43222 226788889854 33 356666544333
No 78
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=41.60 E-value=60 Score=30.40 Aligned_cols=57 Identities=11% Similarity=0.093 Sum_probs=39.4
Q ss_pred EEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHH
Q 006023 541 TIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLA 609 (664)
Q Consensus 541 Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~ 609 (664)
+++++|+ ++-...+.+.+.+.++-+ .++.+.|+|+..... -|.+....+.+..++++
T Consensus 1 vi~i~g~-I~~~~~~~l~~~l~~a~~----------d~~~~~ivl~~~s~G-g~~~~~~~i~~~l~~~~ 57 (161)
T cd00394 1 VIFINGV-IEDVSADQLAAQIRFAEA----------DNSVKAIVLEVNTPG-GRVDAGMNIVDALQASR 57 (161)
T ss_pred CEEEEeE-EccchHHHHHHHHHHHHh----------CCCCceEEEEEECCC-cCHHHHHHHHHHHHHhC
Confidence 5789999 999888999888876432 245788999875433 35555555555555554
No 79
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=41.40 E-value=1.9e+02 Score=24.30 Aligned_cols=56 Identities=18% Similarity=0.261 Sum_probs=38.9
Q ss_pred CCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcC--CHHHHHHHHHCCCccccC
Q 006023 578 RTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASP--RWQVIHKLKSAKLLDRIG 638 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~--~~~v~~~L~~~g~~~~i~ 638 (664)
..+..+++|.. .-|.+|.+.++++.+.. .+..+++... .+.......+.|..+.+.
T Consensus 42 ~~~d~iiid~~---~~~~~~~~~~~~i~~~~--~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~ 99 (112)
T PF00072_consen 42 HPPDLIIIDLE---LPDGDGLELLEQIRQIN--PSIPIIVVTDEDDSDEVQEALRAGADDYLS 99 (112)
T ss_dssp STESEEEEESS---SSSSBHHHHHHHHHHHT--TTSEEEEEESSTSHHHHHHHHHTTESEEEE
T ss_pred cCceEEEEEee---ecccccccccccccccc--ccccEEEecCCCCHHHHHHHHHCCCCEEEE
Confidence 34789999954 34468888888886665 5677776654 345666666788877764
No 80
>TIGR00822 EII-Sor PTS system, mannose/fructose/sorbose family, IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man (PTS splinter group) family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine,N-acetylglucosamine, and other sugars. Other members of this family can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the sorbose-specific IIC subunits of this family of PTS transporters.
Probab=39.28 E-value=4e+02 Score=27.56 Aligned_cols=25 Identities=8% Similarity=0.274 Sum_probs=20.7
Q ss_pred hhhHHHhhchHHHHHHHHHHHHHHH
Q 006023 199 RLGFLVDFLSHAAIVGFMAGAAIVI 223 (664)
Q Consensus 199 rlg~l~~flp~~vi~Gf~~g~gl~i 223 (664)
-...+.+.+|+-+..|+..+.|++=
T Consensus 165 ~v~~il~~iP~~v~~Gl~vaggmLP 189 (265)
T TIGR00822 165 AVQAMLKAIPEVVTHGLQIAGGIIV 189 (265)
T ss_pred HHHHHHHHCHHHHHHHHHHHHhhHH
Confidence 3567899999999999988887763
No 81
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=37.91 E-value=2.1e+02 Score=31.08 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHh---hhhHHHh-hchHHHHHHHHHHHHH
Q 006023 185 TFFAGVFQSVFGLF---RLGFLVD-FLSHAAIVGFMAGAAI 221 (664)
Q Consensus 185 t~l~Gv~~~~lg~l---rlg~l~~-flp~~vi~Gf~~g~gl 221 (664)
++.-..+.+++|.+ |..++-+ ++|.||++||+..+-.
T Consensus 8 tl~la~ilLliG~~Lr~ki~~lqk~~IPasvIgGli~~il~ 48 (368)
T PF03616_consen 8 TLALASILLLIGKFLRAKIPFLQKLFIPASVIGGLIFAILP 48 (368)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHccCCchHHHHHHHHHHH
Confidence 34444455666644 3566666 8999999999965543
No 82
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=37.25 E-value=4.1e+02 Score=28.01 Aligned_cols=28 Identities=14% Similarity=0.391 Sum_probs=23.0
Q ss_pred EEEEEcCcceeeccHHHHHHHHHHHHHhh
Q 006023 540 LTIRINSALFCFANANFIRERIMRWVTEE 568 (664)
Q Consensus 540 ~Ivrl~g~~L~F~na~~~~~~i~~~i~~~ 568 (664)
..+.+++. +...++..+.+++.+.++++
T Consensus 249 ~~i~v~~~-ls~~eah~I~~~ie~~i~~~ 276 (304)
T COG0053 249 VHIEVDPD-LSLEEAHEIADEVEKRIKKE 276 (304)
T ss_pred EEEEECCC-CChHHHHHHHHHHHHHHHHh
Confidence 35777888 99999999999998877754
No 83
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=37.24 E-value=1.1e+02 Score=31.45 Aligned_cols=43 Identities=19% Similarity=0.338 Sum_probs=38.1
Q ss_pred CCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCC
Q 006023 578 RTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPR 621 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~ 621 (664)
.+++.++|| .+.+.+|..+-..+.++.+++++.|..+.++.-.
T Consensus 156 ~~p~lllLD-EP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHD 198 (254)
T COG1121 156 QNPDLLLLD-EPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHD 198 (254)
T ss_pred cCCCEEEec-CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467899999 7899999999999999999999999998887543
No 84
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=36.83 E-value=3.1e+02 Score=31.93 Aligned_cols=42 Identities=7% Similarity=0.139 Sum_probs=29.8
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHCCCcc
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLD 635 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~~g~~~ 635 (664)
+.+++++|-.. +..+++++.|.+++.-++.+ .+.|+++|+.+
T Consensus 423 g~~vvvID~d~-------------~~v~~~~~~g~~v~~GDat~--~~~L~~agi~~ 464 (601)
T PRK03659 423 KMRITVLERDI-------------SAVNLMRKYGYKVYYGDATQ--LELLRAAGAEK 464 (601)
T ss_pred CCCEEEEECCH-------------HHHHHHHhCCCeEEEeeCCC--HHHHHhcCCcc
Confidence 46799999542 34556667888888887764 56788888864
No 85
>PRK11778 putative inner membrane peptidase; Provisional
Probab=36.47 E-value=1.3e+02 Score=32.18 Aligned_cols=70 Identities=14% Similarity=0.305 Sum_probs=47.1
Q ss_pred CCCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCc-cchhHHHHHHHHHHHHHhCCCE
Q 006023 536 TPGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMN-IDTSGILVLEELHKKLASNGIE 614 (664)
Q Consensus 536 ~~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~-IDssgl~~L~~l~~~l~~~gi~ 614 (664)
.|.+.|++++|. +.-.....+++.+...++..+ ++ +.|+|++..-.. ++.++.. ....+++++.|..
T Consensus 89 ~~~v~VI~~~G~-I~~~~~~~l~e~i~a~l~~A~--------~~-~aVvLridSpGG~v~~s~~a--~~~l~~lr~~~kp 156 (330)
T PRK11778 89 KPRLFVLDFKGD-IDASEVESLREEITAILAVAK--------PG-DEVLLRLESPGGVVHGYGLA--ASQLQRLRDAGIP 156 (330)
T ss_pred CCeEEEEEEEEE-ECCCcchhhHHHHHHHHHhcc--------CC-CeEEEEEeCCCCchhHHHHH--HHHHHHHHhcCCC
Confidence 478999999999 998888888888877654322 12 579999754433 3444332 2224567777777
Q ss_pred EEE
Q 006023 615 LVM 617 (664)
Q Consensus 615 l~l 617 (664)
++.
T Consensus 157 Vva 159 (330)
T PRK11778 157 LTV 159 (330)
T ss_pred EEE
Confidence 765
No 86
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=34.63 E-value=9.1e+02 Score=29.25 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=32.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHHHHHHH
Q 006023 259 WYPLNFVLGCSFLIFLLIARFIGRRNKKLFWLPAIAPLLSVILSTLIVY 307 (664)
Q Consensus 259 ~~~~~~~ig~~~l~~ll~~~~~~~~~~~~~~ip~~~~Li~vi~~t~~~~ 307 (664)
.|.+.+++|...+++.++.+++++|.+ +| .+++.+++|.+++-
T Consensus 11 ~~l~~~~lG~~lll~~l~s~~lkeRl~----Ls--~~~v~Ll~GiilGP 53 (810)
T TIGR00844 11 AHVAYSCVGIFSSIFSLVSLFVKEKLY----IG--ESMVASIFGLIVGP 53 (810)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhcC----Cc--HHHHHHHHHHHhhh
Confidence 678888899888888888887776654 33 77888888877664
No 87
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=34.61 E-value=5.3e+02 Score=30.01 Aligned_cols=42 Identities=17% Similarity=0.304 Sum_probs=34.7
Q ss_pred CCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEE
Q 006023 577 KRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMA 618 (664)
Q Consensus 577 ~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la 618 (664)
+++++.|+||+.....-+.+.++.+.+..+++++.|..++-.
T Consensus 91 D~~IkgIvL~i~~~~g~~~~~~~ei~~ai~~fk~sgKpVvA~ 132 (584)
T TIGR00705 91 DRRIEGLVFDLSNFSGWDSPHLVEIGSALSEFKDSGKPVYAY 132 (584)
T ss_pred CCCceEEEEEccCCCCCCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 468999999998877777888888888888998888777644
No 88
>PRK10949 protease 4; Provisional
Probab=34.33 E-value=5.4e+02 Score=30.18 Aligned_cols=43 Identities=14% Similarity=0.334 Sum_probs=34.5
Q ss_pred cCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEE
Q 006023 576 TKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMA 618 (664)
Q Consensus 576 ~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la 618 (664)
++++++.|+||+.....-+.+.++-+.+..+++++.|..++-.
T Consensus 109 ~D~rIkgivL~i~s~gG~~~a~~~eI~~ai~~fk~sGKpVvA~ 151 (618)
T PRK10949 109 DDRNITGIVLDLKNFAGADQPSMQYIGKALREFRDSGKPVYAV 151 (618)
T ss_pred cCCCceEEEEEeCCCCCccHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 3478999999999887777777788888888888888876543
No 89
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=33.78 E-value=1.6e+02 Score=26.73 Aligned_cols=55 Identities=15% Similarity=0.134 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHCCCccccCCcccccCHHHHHHHHhccC
Q 006023 595 TSGILVLEELHKKLASN--GIELVMASPRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTSK 657 (664)
Q Consensus 595 ssgl~~L~~l~~~l~~~--gi~l~la~~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~~~ 657 (664)
-.+...+..+.++++++ +..+..|-.+..++++|+..|+ -+++++||++.+.++.
T Consensus 13 ~~~~~~~~~i~~~l~~~~p~~~V~~afts~~i~~~l~~~~~--------~~p~~~eaL~~l~~~G 69 (127)
T cd03412 13 PTAEKTIDAIEDKVRAAFPDYEVRWAFTSRMIRKKLKKRGI--------EVDTPEEALAKLAADG 69 (127)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEecHHHHHHHHHhcCC--------CCCCHHHHHHHHHHCC
Confidence 36777888888888765 5688888888889999987653 4689999999887654
No 90
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=33.24 E-value=1.2e+02 Score=32.00 Aligned_cols=59 Identities=24% Similarity=0.338 Sum_probs=43.3
Q ss_pred CCccEEEEEccCCCccchhHH----HHHHHHHHHHHhCCCEEEEEc--CCHHHHHHHHHCCCccc
Q 006023 578 RTIQAVIIDMSNSMNIDTSGI----LVLEELHKKLASNGIELVMAS--PRWQVIHKLKSAKLLDR 636 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl----~~L~~l~~~l~~~gi~l~la~--~~~~v~~~L~~~g~~~~ 636 (664)
+..+.+++|+.+--.=|-.-+ ....+..++++++|+.+.++. .++.+.+.|+..|+.+.
T Consensus 126 ~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred eeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 356789999876443332222 446778888999999999984 57888899999998654
No 91
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=32.86 E-value=2.1e+02 Score=28.61 Aligned_cols=57 Identities=16% Similarity=0.272 Sum_probs=47.1
Q ss_pred CCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHCCCcccc
Q 006023 578 RTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLDRI 637 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~~g~~~~i 637 (664)
..++++.|| .+...+|--++.-++++.+.++++|+-+.++.-+ |++.|..+.=.-.+
T Consensus 156 ~~P~fiLLD-EPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHN--VREtL~i~dRaYIi 212 (243)
T COG1137 156 ANPKFILLD-EPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHN--VRETLDICDRAYII 212 (243)
T ss_pred cCCCEEEec-CCccCCCchhHHHHHHHHHHHHhCCceEEEcccc--HHHHHhhhheEEEE
Confidence 367899999 6788899999999999999999999999998544 78888776644333
No 92
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments. Some members have an additional pair of N-terminal transmembrane helices. The functions of the proteins in this family are unknown.
Probab=32.21 E-value=76 Score=31.13 Aligned_cols=57 Identities=16% Similarity=0.101 Sum_probs=43.9
Q ss_pred hhchHHHHHHHHHHHhccCC-CHHHHHHHHhcCccchhHHhhhhhhHhhhhhHHHHHH
Q 006023 438 YYTPIAILASIILSALPGLI-DINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLA 494 (664)
Q Consensus 438 ~~iP~~vLa~ili~~~~~li-~~~~~~~l~k~~~~d~~v~~~t~~~~~~~~v~~Gl~~ 494 (664)
..+...+|-..+..+|+++= |...++++++.++.-..+-+.+.++++..+...+...
T Consensus 23 ~~~~~~~L~lLLF~VGi~lG~~~~~l~~l~~~g~~~Llipl~tIlGSllgg~l~~~ll 80 (191)
T PF03956_consen 23 DKISTYALYLLLFLVGIDLGSNREILRQLRSLGKRALLIPLATILGSLLGGLLASLLL 80 (191)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56777888999999999985 6678899999999888888887777766555544443
No 93
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=31.06 E-value=3.6e+02 Score=23.56 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=41.7
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhC---CCEEEEEcCCHHH-HHHHHHCCCccccCCcccccCHHHHHHHHh
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASN---GIELVMASPRWQV-IHKLKSAKLLDRIGKGCVYLSVAEAMEACL 654 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~---gi~l~la~~~~~v-~~~L~~~g~~~~i~~~~if~tv~~Av~~~~ 654 (664)
+++.|.+-++ +......+.++.++++++ ++.+++.+..... .+.++..|++ .++.+-.+|++.+.
T Consensus 50 ~pdvV~iS~~-----~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~~~G~D------~~~~~~~~~~~~~~ 118 (119)
T cd02067 50 DADAIGLSGL-----LTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLKEIGVD------AYFGPATEAVEVLK 118 (119)
T ss_pred CCCEEEEecc-----ccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHHHcCCe------EEECCHHHHHHHHh
Confidence 4678887655 333445666777777665 5667777765443 3466666663 46777778888764
No 94
>COG2450 Uncharacterized conserved protein [Function unknown]
Probab=30.92 E-value=2.3e+02 Score=25.63 Aligned_cols=73 Identities=21% Similarity=0.156 Sum_probs=49.0
Q ss_pred CCCCCccccC-CCC---EEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHH
Q 006023 526 DISQFPMAIK-TPG---ILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVL 601 (664)
Q Consensus 526 ~~~~~~~~~~-~~~---i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L 601 (664)
+..+|++... .+. |.+.++++. +.+.+..... . .-..||.|.+++..-|-+--+.+
T Consensus 26 dl~e~eee~~~e~~~~~Ikvaei~~~-------~Dl~~~~~ei-y------------~GNIvIaDit~l~~d~~~~~~V~ 85 (124)
T COG2450 26 DLEEYEEEISPEEAKVYIKVAEISSY-------EDLEEAKREI-Y------------AGNIVIADITPLERDDDLFERVI 85 (124)
T ss_pred ecccccccccCCCCeEEEEEEEeCCH-------HHHHHHHHHH-h------------cCCEEEEEcCCcccChhHHHHHH
Confidence 4455655443 222 566777777 5555544332 1 12699999999999888888888
Q ss_pred HHHHHHHHhCCCEEEEE
Q 006023 602 EELHKKLASNGIELVMA 618 (664)
Q Consensus 602 ~~l~~~l~~~gi~l~la 618 (664)
+++.+..++.|+.+...
T Consensus 86 e~lr~~a~~~ggdi~~l 102 (124)
T COG2450 86 EELRDTAEEVGGDIAKL 102 (124)
T ss_pred HHHHHHHHHhCchhhhh
Confidence 88888888877765433
No 95
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=30.22 E-value=9.4e+02 Score=28.47 Aligned_cols=119 Identities=12% Similarity=0.170 Sum_probs=66.2
Q ss_pred ccccCCCh--hhhhhhH-HHHHHHHHHHHHHHHHHHHHh------CCCchhhhhhhhhhhHHHhhccCCcccccchHHHH
Q 006023 86 NWGRNYKA--SKFKSDL-MAGLTLASLSIPQSIGYANLA------KLDPQYGLYTSVIPPLIYALMGSSREIAIGPVAVV 156 (664)
Q Consensus 86 ~wl~~y~~--~~l~~D~-~aGltv~~~~iPq~~aya~la------glpp~~GLyss~v~~liy~l~Gss~~~~~Gp~a~~ 156 (664)
.|+|.+++ -.+..++ ..++.++++++=..++-+... .+++-.=|++-.+..++-++|+.-+. .|..+
T Consensus 313 ~g~~~~~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y~vd~nqELiAlG~~Ni~sSff~~~p~--tgs~s-- 388 (665)
T KOG0236|consen 313 RGFPPPSLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGYKVDSNQELIALGISNILSSFFGCYPT--TGSFS-- 388 (665)
T ss_pred CCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCChHHHHHHHHHHhhhhhceEcc--cchhh--
Confidence 45555554 2222332 236666666666666665532 26677778888888999898887432 22222
Q ss_pred HHHHHHHHhhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHH
Q 006023 157 SMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIV 222 (664)
Q Consensus 157 sl~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~ 222 (664)
-+++....+- .+ + ...+++|++ .++.++-++.+..|+|..++...+-.++..
T Consensus 389 ----RSav~~~sG~----~T--~---~s~i~~~~~-vl~~l~~l~p~f~~iP~~vLaaIIi~a~~~ 440 (665)
T KOG0236|consen 389 ----RSAVNIKSGG----RT--Q---VAGIVSAAL-VLLALLFLGPLFYYIPKCVLAAIIISALIG 440 (665)
T ss_pred ----HHHHHhhcCC----cc--h---HHHHHHHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHhhH
Confidence 2222221100 01 1 122333333 233334478899999999999877766654
No 96
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=29.12 E-value=1.3e+02 Score=33.27 Aligned_cols=64 Identities=13% Similarity=0.258 Sum_probs=49.0
Q ss_pred CCEEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEE
Q 006023 537 PGILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELV 616 (664)
Q Consensus 537 ~~i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~ 616 (664)
+.+.+++++|. ++=++++++++.+++.-+ +....+|+++..=...+.+. .++.+...+..+.+.
T Consensus 26 ~~v~vi~i~g~-I~~~s~~~l~r~l~~A~~-----------~~a~~vvl~ldTPGGl~~sm----~~iv~~i~~s~vPV~ 89 (436)
T COG1030 26 KKVYVIEIDGA-IDPASADYLQRALQSAEE-----------ENAAAVVLELDTPGGLLDSM----RQIVRAILNSPVPVI 89 (436)
T ss_pred CeEEEEEecCc-cCHHHHHHHHHHHHHHHh-----------CCCcEEEEEecCCCchHHHH----HHHHHHHHcCCCCEE
Confidence 47899999999 999999999999987533 34579999987776666554 455666667777743
No 97
>PRK04596 minC septum formation inhibitor; Reviewed
Probab=28.79 E-value=2.7e+02 Score=28.58 Aligned_cols=75 Identities=17% Similarity=0.088 Sum_probs=48.1
Q ss_pred ccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEE-EEcCCHHHHHHHHH
Q 006023 552 ANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELV-MASPRWQVIHKLKS 630 (664)
Q Consensus 552 ~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~-la~~~~~v~~~L~~ 630 (664)
.+.+.+.+.+.+++++.. +-=.-..||||++.+..-.. . .-|..+.+.++++|...+ +.+.+++.++.-..
T Consensus 28 ~d~~~l~~~L~~ki~~aP------~FF~~~PvVlDl~~l~~~~~-~-~dl~~L~~~Lr~~gl~~vGV~g~~~~~~~~a~~ 99 (248)
T PRK04596 28 LDVPRLVQEMRERVTRAP------KLFGRAAVILDFGGLSQVPD-L-ATAKALLDGLRSAGVLPVALAYGTSEIDLLSQQ 99 (248)
T ss_pred CCHHHHHHHHHHHHHhCh------HhhCCCcEEEEchhhcCccc-c-ccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 356777787777665321 11134689999999863110 1 126668888888887765 66777777666666
Q ss_pred CCCc
Q 006023 631 AKLL 634 (664)
Q Consensus 631 ~g~~ 634 (664)
.|+.
T Consensus 100 ~gL~ 103 (248)
T PRK04596 100 LGLP 103 (248)
T ss_pred CCCC
Confidence 6763
No 98
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=28.74 E-value=1.2e+02 Score=27.81 Aligned_cols=61 Identities=15% Similarity=0.187 Sum_probs=38.3
Q ss_pred CccchhHHHHHHHHHHHHHhCCC-EE-EEEcCC--------HHHHHHHHHCCCccccCCcccccCHHHHHHHHh
Q 006023 591 MNIDTSGILVLEELHKKLASNGI-EL-VMASPR--------WQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACL 654 (664)
Q Consensus 591 ~~IDssgl~~L~~l~~~l~~~gi-~l-~la~~~--------~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~ 654 (664)
+.+-++.+..++++.+.++++|. .+ ++++.. ++..+.|++.|+...+++.. +.++.++..+
T Consensus 57 S~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv~~vf~pgt---~~~~i~~~l~ 127 (128)
T cd02072 57 SSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGFDRVFAPGT---PPEEAIADLK 127 (128)
T ss_pred eccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHHHHHHcCCCEEECcCC---CHHHHHHHHh
Confidence 44556666778888888887754 22 344433 34567899999976555432 6677666543
No 99
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=28.52 E-value=1.1e+02 Score=32.38 Aligned_cols=52 Identities=23% Similarity=0.330 Sum_probs=36.5
Q ss_pred CccEEEEEccCC-----------CccchhH-HHHHHHHHHHHHhCCCEEEEEcC--CHHHHHHHHH
Q 006023 579 TIQAVIIDMSNS-----------MNIDTSG-ILVLEELHKKLASNGIELVMASP--RWQVIHKLKS 630 (664)
Q Consensus 579 ~~~~vILD~s~V-----------~~IDssg-l~~L~~l~~~l~~~gi~l~la~~--~~~v~~~L~~ 630 (664)
..|++|+|+.+. ..|.... -..+.+..++++++|+.+.+|.- .+.+.+.|+.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 468899998641 2222221 24678899999999999999944 4567777887
No 100
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=28.13 E-value=1.4e+02 Score=28.83 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=39.4
Q ss_pred EEEEEEcCcceeeccHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEE
Q 006023 539 ILTIRINSALFCFANANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIEL 615 (664)
Q Consensus 539 i~Ivrl~g~~L~F~na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l 615 (664)
+.+++++|. ++....+++++.+.+..+ .+.+.+++++..-...-.++ .++.+.+++..+.+
T Consensus 1 v~vi~i~g~-I~~~~~~~l~~~l~~a~~-----------~~~~~ivl~inspGG~v~~~----~~I~~~l~~~~~pv 61 (178)
T cd07021 1 VYVIPIEGE-IDPGLAAFVERALKEAKE-----------EGADAVVLDIDTPGGRVDSA----LEIVDLILNSPIPT 61 (178)
T ss_pred CEEEEEeeE-ECHHHHHHHHHHHHHHHh-----------CCCCeEEEEEECcCCCHHHH----HHHHHHHHhCCCCE
Confidence 468999999 999888888888876433 23678888876655443333 33444444444333
No 101
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=27.40 E-value=1.2e+02 Score=27.91 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=38.9
Q ss_pred cchhHHHHHHHHHHHHHhCCC--EEEEEcCC-----HH---HHHHHHHCCCccccCCcccccCHHHHHHHHh
Q 006023 593 IDTSGILVLEELHKKLASNGI--ELVMASPR-----WQ---VIHKLKSAKLLDRIGKGCVYLSVAEAMEACL 654 (664)
Q Consensus 593 IDssgl~~L~~l~~~l~~~gi--~l~la~~~-----~~---v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~ 654 (664)
+-++.+..+.++.+.++++|. ..++++.. ++ +.+.|++.|+...+++.. +.++.+++.+
T Consensus 61 l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~~vF~pgt---~~~~iv~~l~ 129 (134)
T TIGR01501 61 LYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFDRVFAPGT---PPEVVIADLK 129 (134)
T ss_pred ccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHHHHHHcCCCEEECcCC---CHHHHHHHHH
Confidence 336777788899999988763 34555543 22 456799999865555432 5677777765
No 102
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=26.11 E-value=2.8e+02 Score=28.58 Aligned_cols=74 Identities=18% Similarity=0.322 Sum_probs=52.1
Q ss_pred CCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHH-HHCCCccccCCcccccCHHHHHHHH
Q 006023 578 RTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKL-KSAKLLDRIGKGCVYLSVAEAMEAC 653 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L-~~~g~~~~i~~~~if~tv~~Av~~~ 653 (664)
.++.-+||| .+-+.+|-.-.++|++...+++++|..+.+.+-+-+-.+.| ++.=+.+ -|+.-++-++++.-...
T Consensus 147 HePeLlILD-EPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~-kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 147 HEPELLILD-EPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLK-KGQTVLYGTVEDIRRSF 221 (300)
T ss_pred cCCCEEEec-CCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheec-CCceEEeccHHHHHHhc
Confidence 457899999 67888999999999999999999999999997654433333 3222222 24444666666654433
No 103
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=25.73 E-value=2e+02 Score=28.70 Aligned_cols=38 Identities=11% Similarity=0.316 Sum_probs=31.2
Q ss_pred CCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEE
Q 006023 578 RTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELV 616 (664)
Q Consensus 578 ~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~ 616 (664)
++++.|+|+...-.+ +.+.++.+.+..+++++.+..++
T Consensus 45 ~~ik~vvL~~~s~gg-~~~~~~el~~~i~~~~~~~kpVi 82 (222)
T cd07018 45 DRIKGIVLDLDGLSG-GLAKLEELRQALERFRASGKPVI 82 (222)
T ss_pred CCeEEEEEECCCCCC-CHHHHHHHHHHHHHHHHhCCeEE
Confidence 679999999988877 88888888888888887666654
No 104
>COG1269 NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion]
Probab=25.10 E-value=3.5e+02 Score=32.01 Aligned_cols=45 Identities=18% Similarity=0.315 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhchHHHHHHHHHHHHHHHH
Q 006023 179 KLVFTVTFFAGVFQSVFGLFRLGFLVDFLSHAAIVGFMAGAAIVIG 224 (664)
Q Consensus 179 ~~~~~~t~l~Gv~~~~lg~lrlg~l~~flp~~vi~Gf~~g~gl~i~ 224 (664)
...+.++++.|++.+.+|++ +|++-++-+.....-+.....+..+
T Consensus 456 ~~~m~~sl~iG~~hl~~G~~-lg~~~~~~~~~~~~a~~~~~~w~~~ 500 (660)
T COG1269 456 SNILILSLLIGVLHLSLGLL-LGFINRVRSGDIKGAILPQLLWLLI 500 (660)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchHHHhhhhHHHHHH
Confidence 45788999999999999999 7777766666655555555444443
No 105
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=25.00 E-value=81 Score=27.85 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=25.4
Q ss_pred cEEEEEccCCCcc-chhHHHHHHHHHHHHHhCCCEEEEEcCC
Q 006023 581 QAVIIDMSNSMNI-DTSGILVLEELHKKLASNGIELVMASPR 621 (664)
Q Consensus 581 ~~vILD~s~V~~I-Dssgl~~L~~l~~~l~~~gi~l~la~~~ 621 (664)
..+||| ..+.+ + -..+..+..-+++.++++++++..
T Consensus 89 ~~lviD--e~~~l~~---~~~l~~l~~l~~~~~~~vvl~G~~ 125 (131)
T PF13401_consen 89 VLLVID--EADHLFS---DEFLEFLRSLLNESNIKVVLVGTP 125 (131)
T ss_dssp EEEEEE--TTHHHHT---HHHHHHHHHHTCSCBEEEEEEESS
T ss_pred eEEEEe--ChHhcCC---HHHHHHHHHHHhCCCCeEEEEECh
Confidence 578888 77777 5 445555544445788999999876
No 106
>PRK09757 PTS system N-acetylgalactosamine-specific transporter subunit IIC; Provisional
Probab=23.87 E-value=8.3e+02 Score=25.32 Aligned_cols=24 Identities=21% Similarity=0.259 Sum_probs=19.5
Q ss_pred hhhHHHhhchHHHHHHHHHHHHHH
Q 006023 199 RLGFLVDFLSHAAIVGFMAGAAIV 222 (664)
Q Consensus 199 rlg~l~~flp~~vi~Gf~~g~gl~ 222 (664)
-...+.+.+|.-+..|+..+.|++
T Consensus 166 ~v~~~~~~iP~~v~~GL~vaggmL 189 (267)
T PRK09757 166 AMQALVKAMPAWLTHGFEVAGGIL 189 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchH
Confidence 356789999999999988877765
No 107
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=23.41 E-value=6.3e+02 Score=29.57 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=29.1
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHCCCcc
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRWQVIHKLKSAKLLD 635 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~~v~~~L~~~g~~~ 635 (664)
+.+++++|.+. +..+++++.|.+++.-.+.+ .+.|+.+|+.+
T Consensus 423 g~~vvvID~d~-------------~~v~~~~~~g~~v~~GDat~--~~~L~~agi~~ 464 (621)
T PRK03562 423 GVKMTVLDHDP-------------DHIETLRKFGMKVFYGDATR--MDLLESAGAAK 464 (621)
T ss_pred CCCEEEEECCH-------------HHHHHHHhcCCeEEEEeCCC--HHHHHhcCCCc
Confidence 46789999663 34555666788887777665 55788888754
No 108
>PRK04516 minC septum formation inhibitor; Reviewed
Probab=23.09 E-value=4e+02 Score=27.07 Aligned_cols=72 Identities=11% Similarity=0.148 Sum_probs=47.2
Q ss_pred cHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEE-EEcCCHHHHHHHHHC
Q 006023 553 NANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELV-MASPRWQVIHKLKSA 631 (664)
Q Consensus 553 na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~-la~~~~~v~~~L~~~ 631 (664)
+.+.+++.+.+.+++.. + -+-..+|||++.+..-+. .-|..+.+.++++|..++ +.+.+++........
T Consensus 26 d~~~l~~~L~~ki~qaP------~-f~~aPvVldl~~l~~~~~---~dl~~L~~~l~~~gl~~vGv~g~~~~~~~~a~~~ 95 (235)
T PRK04516 26 DLFDLEDVLVKLGKKFQ------E-SGVVPFVLDVQEFDYPES---LDLAALVSLFSRHGMQILGLKHSNERWAAVAMKY 95 (235)
T ss_pred CHHHHHHHHHHHHHhCc------C-CCCCcEEEEchhhCCccc---ccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHhhC
Confidence 56777777777665321 1 223589999999974332 226778888899997765 556666665555656
Q ss_pred CCc
Q 006023 632 KLL 634 (664)
Q Consensus 632 g~~ 634 (664)
|+.
T Consensus 96 gL~ 98 (235)
T PRK04516 96 HLL 98 (235)
T ss_pred CCc
Confidence 663
No 109
>PF06686 SpoIIIAC: Stage III sporulation protein AC/AD protein family
Probab=23.07 E-value=3.1e+02 Score=21.06 Aligned_cols=47 Identities=9% Similarity=0.313 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhc
Q 006023 153 VAVVSMLLSALMQNVQDPAADPVAYRKLVFTVTFFAGVFQSVFGLFRLGFLVDFL 207 (664)
Q Consensus 153 ~a~~sl~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~Gv~~~~lg~lrlg~l~~fl 207 (664)
.+.++.+++..+++... -+.+..+++.+|++.+.+.+-+++.+.+.+
T Consensus 8 igii~~~l~~vlk~~~~--------~e~a~~isla~~i~I~~~~~~~i~~l~~~i 54 (58)
T PF06686_consen 8 IGIIAAFLALVLKQAGE--------PEYASLISLAGGILIFLLVLPKISSLFETI 54 (58)
T ss_pred HHHHHHHHHHHHHHcCC--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677777776431 247788899999999998888888877765
No 110
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=22.99 E-value=7.1e+02 Score=27.78 Aligned_cols=36 Identities=14% Similarity=-0.050 Sum_probs=24.5
Q ss_pred CCEEEEEcCC----HHHHHHHHHCCCccccCCcccccCHHHHHHHHh
Q 006023 612 GIELVMASPR----WQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACL 654 (664)
Q Consensus 612 gi~l~la~~~----~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~ 654 (664)
+..++.+... ++.++.|+..|+ ..|.+.++|++++.
T Consensus 402 ~KPvv~~~~gg~~~~~~~~~L~~~Gi-------p~f~~p~~A~~al~ 441 (447)
T TIGR02717 402 EKPVVAGFMGGKSVDPAKRILEENGI-------PNYTFPERAVKALS 441 (447)
T ss_pred CCcEEEEecCCccHHHHHHHHHhCCC-------CccCCHHHHHHHHH
Confidence 5666444432 346666777775 38999999998765
No 111
>COG3715 ManY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]
Probab=22.95 E-value=2.8e+02 Score=28.60 Aligned_cols=64 Identities=23% Similarity=0.340 Sum_probs=44.7
Q ss_pred cCCchHHHHHhHhHhHhhhcCcccccccchhhhhhhhcCCCcchhHHHHHHHHHHHHHHhhHHhh
Q 006023 374 LDGNKEMVAMGFMNIVGSLTSCYVATGSFSRTAVNFSAGCQTVVSNIVMAITVLLSLELFTSLLY 438 (664)
Q Consensus 374 ~d~nqEl~a~G~aNiv~s~fg~~p~t~s~srS~v~~~~G~~T~ls~iv~a~~~ll~ll~l~~l~~ 438 (664)
+-..-||.++|.+|+-| -.--=|.+++.-.|.....+|..++-+..-.++-+.....++.-+.+
T Consensus 51 iGatLEL~~LG~~~iGg-avpPD~~~~si~~t~~aI~sg~~~~~~a~~lAiPiA~a~q~l~~~~r 114 (265)
T COG3715 51 IGATLELAALGWANIGG-AVPPDVALASIIGTAFAITSGQGIPEAALALAIPIAVAGQFLTTFVR 114 (265)
T ss_pred HhHHHHHHHHhCcCccc-CCCCchHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44667999999999877 33334667888899999999887666666555555555555554444
No 112
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=22.76 E-value=1.6e+02 Score=26.22 Aligned_cols=54 Identities=15% Similarity=0.323 Sum_probs=34.6
Q ss_pred cEEEEEccCCCc-----cchh----HHHHHHHHHHHHHhCCCEEEEEcCCH----------HHHHHHHHCCCc
Q 006023 581 QAVIIDMSNSMN-----IDTS----GILVLEELHKKLASNGIELVMASPRW----------QVIHKLKSAKLL 634 (664)
Q Consensus 581 ~~vILD~s~V~~-----IDss----gl~~L~~l~~~l~~~gi~l~la~~~~----------~v~~~L~~~g~~ 634 (664)
|.+++|+.++-- .+.. -..-..++.+.++++|+++.++.-++ .+.+.+++.++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 356677665433 2112 22345667888889999999886644 467778877764
No 113
>PLN03211 ABC transporter G-25; Provisional
Probab=22.11 E-value=2.3e+02 Score=33.43 Aligned_cols=75 Identities=19% Similarity=0.215 Sum_probs=54.7
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCCH--HHHHHHHHCCCccccCCcccccCHHHHHHHHhc
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPRW--QVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLT 655 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~~--~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~ 655 (664)
+++.+++| .+.+.+|+.....+.++.+++.++|..++++.-++ ++.+..++.-+.+. |+-..+.+.+++++++++
T Consensus 224 ~P~iLlLD-EPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~-G~iv~~G~~~~~~~~f~~ 300 (659)
T PLN03211 224 NPSLLILD-EPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSE-GRCLFFGKGSDAMAYFES 300 (659)
T ss_pred CCCEEEEe-CCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecC-CcEEEECCHHHHHHHHHH
Confidence 46899999 78899999999999999999988888887775544 35555554433321 333345678888888765
No 114
>PF07907 YibE_F: YibE/F-like protein; InterPro: IPR012507 The sequences featured in this family are similar to two proteins expressed by Lactococcus lactis, YibE (Q9CHC5 from SWISSPROT) and YibF (Q9CHC4 from SWISSPROT). Most of the members of this family are annotated as being putative membrane proteins, and in fact the sequences contain a high proportion of hydrophobic residues.
Probab=21.36 E-value=5.9e+02 Score=25.99 Aligned_cols=35 Identities=31% Similarity=0.388 Sum_probs=19.7
Q ss_pred HHHHHHHHhhhhCCccCC-chHHHHHhHhHhHhhhcC
Q 006023 359 AIAVGRSFASIKGYHLDG-NKEMVAMGFMNIVGSLTS 394 (664)
Q Consensus 359 ~i~~~~~~a~~~~~~~d~-nqEl~a~G~aNiv~s~fg 394 (664)
+++++-+..+.+..+.|. .|||+.-| .|+---..|
T Consensus 144 aisIaSsl~El~~~~p~is~~eL~~SG-~~IGrDimG 179 (244)
T PF07907_consen 144 AISIASSLFELKRHNPDISRKELFKSG-MNIGRDIMG 179 (244)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHH-HHHHHHHHH
Confidence 345555555555554444 58888887 455443333
No 115
>COG0565 LasT rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=21.33 E-value=1.7e+02 Score=29.72 Aligned_cols=68 Identities=22% Similarity=0.303 Sum_probs=46.3
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCC-CEEEEEcCCHH--HHHHHHHCCCccccCCcccccCHHHHHHHHh
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNG-IELVMASPRWQ--VIHKLKSAKLLDRIGKGCVYLSVAEAMEACL 654 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~g-i~l~la~~~~~--v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~ 654 (664)
+++.|..+-+.=.+|-+.+ +-++..| -+|+|++|+.. -.-.-..+|=.+.+...++|+|.+||+..|.
T Consensus 4 ~i~iVLVep~~~gNIG~vA--------RaMKNfGl~eL~LV~Pr~~~~eeA~a~A~gA~dile~A~i~~tL~eAl~d~~ 74 (242)
T COG0565 4 NIRIVLVEPSHPGNIGSVA--------RAMKNFGLSELRLVNPRAGLDEEARALAAGARDILENAKIVDTLEEALADCD 74 (242)
T ss_pred ccEEEEEcCCCCccHHHHH--------HHHHhCCcceEEEECCCCCCCHHHHHHhccchhhhccCeeecCHHHHhcCCC
Confidence 3566666666666665544 4455556 57999999874 2223334566677777899999999998664
No 116
>PRK10582 cytochrome o ubiquinol oxidase subunit IV; Provisional
Probab=21.12 E-value=5.9e+02 Score=22.60 Aligned_cols=55 Identities=24% Similarity=0.341 Sum_probs=38.1
Q ss_pred hhchHHHHHHHHHHHHHHHHHhhhcccccccccCCCCcHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHH
Q 006023 205 DFLSHAAIVGFMAGAAIVIGLQQLKGLLGISHFTNKTDVVSVLGSVFSSLHHSYWYPLNFVLGCSFLIFLLI 276 (664)
Q Consensus 205 ~flp~~vi~Gf~~g~gl~i~~~Ql~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~l~~ll~ 276 (664)
+.+|+.....++.+.|+.=+..|+..++-++..+ .+ . ||..+++.++..+++++.
T Consensus 39 ~~~~~~~~~~~i~~lA~vQi~VqL~~FLHl~~~~--~~-------------~--wn~~al~Ft~~i~~iiv~ 93 (109)
T PRK10582 39 GAASPAVILGTILAMAVVQILVHLVCFLHMNTKS--DE-------------G--WNMTAFVFTVLIIAILVV 93 (109)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHhcccCCc--cc-------------c--hHHHHHHHHHHHHHHHHH
Confidence 4679999999999999988999999988765311 11 1 777666666554444433
No 117
>PRK10949 protease 4; Provisional
Probab=21.07 E-value=4.9e+02 Score=30.50 Aligned_cols=70 Identities=13% Similarity=0.095 Sum_probs=50.2
Q ss_pred CCCEEEEEEcCcceeec-------cHHHHHHHHHHHHHhhhhhhhhhcCCCccEEEEEccCCCccchhHHHHHHHHHHHH
Q 006023 536 TPGILTIRINSALFCFA-------NANFIRERIMRWVTEEQDELEETTKRTIQAVIIDMSNSMNIDTSGILVLEELHKKL 608 (664)
Q Consensus 536 ~~~i~Ivrl~g~~L~F~-------na~~~~~~i~~~i~~~~~~~~~~~~~~~~~vILD~s~V~~IDssgl~~L~~l~~~l 608 (664)
.+.|.|+.++|. +.=+ +.+.+.+.++++.+ +++++.|+|+...-. -..++.+.+.+..+++
T Consensus 325 ~~~Iavi~~~G~-I~~g~~~~g~~~~~~~~~~l~~a~~----------D~~vkaVvLrInSpG-Gs~~ase~i~~~i~~~ 392 (618)
T PRK10949 325 GGSIAVIFANGA-IMDGEETPGNVGGDTTAAQIRDARL----------DPKVKAIVLRVNSPG-GSVTASEVIRAELAAA 392 (618)
T ss_pred CCeEEEEEEEEE-EcCCCCcCCCcCHHHHHHHHHHHHh----------CCCCcEEEEEecCCC-CcHHHHHHHHHHHHHH
Confidence 467999999999 8643 34556666665433 267899999986544 4667777787777888
Q ss_pred HhCCCEEEE
Q 006023 609 ASNGIELVM 617 (664)
Q Consensus 609 ~~~gi~l~l 617 (664)
++.|..++.
T Consensus 393 r~~gKPVva 401 (618)
T PRK10949 393 RAAGKPVVV 401 (618)
T ss_pred HhcCCcEEE
Confidence 887877775
No 118
>cd00851 MTH1175 This uncharacterized conserved protein belongs to a family of iron-molybdenum cluster-binding proteins that includes NifX, NifB, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).
Probab=21.03 E-value=2e+02 Score=24.25 Aligned_cols=47 Identities=28% Similarity=0.329 Sum_probs=34.0
Q ss_pred HHHHHHhCCCEEEEEc-CCHHHHHHHHHCCCccccCCcccccCHHHHHHHH
Q 006023 604 LHKKLASNGIELVMAS-PRWQVIHKLKSAKLLDRIGKGCVYLSVAEAMEAC 653 (664)
Q Consensus 604 l~~~l~~~gi~l~la~-~~~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~ 653 (664)
+.+.+.+.|+++++++ ..+...+.|+..|+.-..+.+ .+++|+++..
T Consensus 55 ~~~~l~~~~v~~vi~~~iG~~~~~~l~~~gI~v~~~~~---~~i~~vl~~~ 102 (103)
T cd00851 55 AAEFLADEGVDVVIVGGIGPRALNKLRNAGIKVYKGAE---GTVEEAIEAL 102 (103)
T ss_pred HHHHHHHcCCCEEEeCCCCcCHHHHHHHCCCEEEEcCC---CCHHHHHHhh
Confidence 5555566899999985 477889999999984333322 6889998754
No 119
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=20.79 E-value=1.7e+02 Score=29.46 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=44.9
Q ss_pred EEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEc-----CCHHHHHHHHH-CCCccccCCcccccCHHHHHHHHhc
Q 006023 583 VIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMAS-----PRWQVIHKLKS-AKLLDRIGKGCVYLSVAEAMEACLT 655 (664)
Q Consensus 583 vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~-----~~~~v~~~L~~-~g~~~~i~~~~if~tv~~Av~~~~~ 655 (664)
+++|+.++-.-+..-+.-=.+..+.++++|+++.+.. ...+..+.|+. .|+. +..+.++.+-..+.++.++
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~--~~~~~iits~~~~~~~l~~ 77 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD--VSPDQIITSGSVTKDLLRQ 77 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC--CCHHHeeeHHHHHHHHHHH
Confidence 3566666654444433333566677788899998873 33456677777 5662 3456788887777776653
No 120
>COG1296 AzlC Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]
Probab=20.77 E-value=1.4e+02 Score=30.43 Aligned_cols=44 Identities=27% Similarity=0.458 Sum_probs=32.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHh---CCCchhhhhhhhhhhHHHh
Q 006023 94 SKFKSDLMAGLTLASLSIPQSIGYANLA---KLDPQYGLYTSVIPPLIYA 140 (664)
Q Consensus 94 ~~l~~D~~aGltv~~~~iPq~~aya~la---glpp~~GLyss~v~~liy~ 140 (664)
+.+++.+.+++-+.+-.+|-|++|+.++ |+++.. +.+...++|+
T Consensus 10 ~~f~~G~~~~~Pi~lg~ip~Gl~fG~~a~~~G~s~~e---~~lmS~~iyA 56 (238)
T COG1296 10 AEFRQGLKASLPILLGYLPIGLAFGLLAVALGFSPLE---AILMSLLIYA 56 (238)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHcCCcHHH---HHHHHHHHHc
Confidence 5678888888888899999999999887 666543 3444455554
No 121
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=20.62 E-value=2.4e+02 Score=33.00 Aligned_cols=76 Identities=13% Similarity=0.110 Sum_probs=57.2
Q ss_pred CccEEEEEccCCCccchhHHHHHHHHHHHHHhCCCEEEEEcCC--HHHHHHHHHCCCccccCCcccccCHHHHHHHHhcc
Q 006023 579 TIQAVIIDMSNSMNIDTSGILVLEELHKKLASNGIELVMASPR--WQVIHKLKSAKLLDRIGKGCVYLSVAEAMEACLTS 656 (664)
Q Consensus 579 ~~~~vILD~s~V~~IDssgl~~L~~l~~~l~~~gi~l~la~~~--~~v~~~L~~~g~~~~i~~~~if~tv~~Av~~~~~~ 656 (664)
+++.+++| .+.+.+|+.....+.+..+++.++|..++++--+ .++.+..++.-+.+ -|+-..+.+.+|+++++++.
T Consensus 184 ~p~vlllD-EPtsgLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~~~~~~~f~~~ 261 (617)
T TIGR00955 184 DPPLLFCD-EPTSGLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSPDQAVPFFSDL 261 (617)
T ss_pred CCCEEEee-CCCcchhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCHHHHHHHHHHc
Confidence 46789999 6788999999999999999998888887777544 35677777665554 24445667778888777653
No 122
>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi. Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.
Probab=20.30 E-value=1.2e+03 Score=25.93 Aligned_cols=78 Identities=14% Similarity=0.100 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHHHhhHHhhhchHHHHHHHHHHHhccCCCHHHHHHHHhcCccchhHHhhhhhhHhhhhhHHHHHHHH
Q 006023 417 VSNIVMAITVLLSLELFTSLLYYTPIAILASIILSALPGLIDINEAINIYKVDKLDFLACIGAFLGVLFASVEIGLLAAV 496 (664)
Q Consensus 417 ls~iv~a~~~ll~ll~l~~l~~~iP~~vLa~ili~~~~~li~~~~~~~l~k~~~~d~~v~~~t~~~~~~~~v~~Gl~~Gv 496 (664)
-++.|.++++.+.+++.+-+=...|+-.+..|.-.+..... +-.-...-.. .-.++..+++..+.+|+++++
T Consensus 135 ~~saV~av~l~~~i~~~~~lRa~~p~~~~~~I~~~I~~~i~-------~t~g~~~p~~-~~~~l~~~ll~P~~ig~ai~~ 206 (459)
T PF10337_consen 135 RASAVFAVFLFVFIYFHGWLRAKNPKLNFPVIFGSIFVDIF-------LTYGPLFPTF-FAYTLGKTLLKPFLIGIAIAL 206 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHH-------HHhCcCcCcc-hHHHHHHHHHHHHHHHHHHHH
Confidence 34567777777777777777777886444333222111110 0000000111 233444556677788888888
Q ss_pred HHHHHH
Q 006023 497 TISFAK 502 (664)
Q Consensus 497 ~~s~~~ 502 (664)
+++++.
T Consensus 207 ~vslli 212 (459)
T PF10337_consen 207 VVSLLI 212 (459)
T ss_pred HHheee
Confidence 888764
Done!