Query 006025
Match_columns 664
No_of_seqs 833 out of 4791
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 13:59:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006025.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006025hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 4.5E-42 1.5E-46 370.5 34.7 369 73-467 19-388 (407)
2 4hb9_A Similarities with proba 100.0 1.5E-40 5.3E-45 358.6 32.5 348 78-438 2-380 (412)
3 2xdo_A TETX2 protein; tetracyc 100.0 9E-37 3.1E-41 328.0 34.4 339 74-436 23-379 (398)
4 2vou_A 2,6-dihydroxypyridine h 100.0 8.5E-37 2.9E-41 328.1 32.8 331 75-439 3-365 (397)
5 3fmw_A Oxygenase; mithramycin, 100.0 5.6E-38 1.9E-42 350.3 22.0 375 76-487 48-433 (570)
6 2qa2_A CABE, polyketide oxygen 100.0 8.5E-37 2.9E-41 336.4 30.3 331 75-438 10-346 (499)
7 2qa1_A PGAE, polyketide oxygen 100.0 1.1E-36 3.6E-41 335.7 30.5 331 75-438 9-345 (500)
8 2x3n_A Probable FAD-dependent 100.0 4.7E-37 1.6E-41 330.4 22.4 341 76-439 5-356 (399)
9 3c96_A Flavin-containing monoo 100.0 1.5E-35 5.2E-40 319.7 34.2 335 76-436 3-366 (410)
10 1pn0_A Phenol 2-monooxygenase; 100.0 2.4E-35 8.1E-40 335.0 30.5 335 77-438 8-419 (665)
11 3alj_A 2-methyl-3-hydroxypyrid 100.0 3.4E-36 1.2E-40 321.3 19.7 323 76-435 10-343 (379)
12 2r0c_A REBC; flavin adenine di 100.0 1.9E-34 6.6E-39 321.8 31.0 336 75-437 24-376 (549)
13 3ihg_A RDME; flavoenzyme, anth 100.0 1.2E-34 4.2E-39 323.3 28.6 340 76-437 4-368 (535)
14 1k0i_A P-hydroxybenzoate hydro 100.0 9.9E-35 3.4E-39 311.7 20.7 373 77-481 2-387 (394)
15 2dkh_A 3-hydroxybenzoate hydro 100.0 6.6E-33 2.3E-37 314.5 32.3 335 76-437 31-409 (639)
16 3e1t_A Halogenase; flavoprotei 100.0 2.4E-31 8.1E-36 294.8 32.3 342 76-436 6-363 (512)
17 3i3l_A Alkylhalidase CMLS; fla 100.0 2.5E-31 8.4E-36 297.1 32.2 346 74-437 20-376 (591)
18 3oz2_A Digeranylgeranylglycero 100.0 4.9E-31 1.7E-35 282.5 31.7 326 75-430 2-338 (397)
19 3c4a_A Probable tryptophan hyd 100.0 8.2E-32 2.8E-36 287.5 15.1 337 78-466 1-353 (381)
20 3atr_A Conserved archaeal prot 100.0 1.1E-30 3.9E-35 285.1 23.9 330 76-438 5-351 (453)
21 3cgv_A Geranylgeranyl reductas 100.0 4.9E-29 1.7E-33 267.4 31.7 332 76-437 3-345 (397)
22 3nix_A Flavoprotein/dehydrogen 100.0 3.2E-29 1.1E-33 271.1 29.6 335 76-433 4-350 (421)
23 2pyx_A Tryptophan halogenase; 100.0 7.8E-27 2.7E-31 259.3 30.6 330 76-436 6-409 (526)
24 2gmh_A Electron transfer flavo 100.0 1.6E-26 5.4E-31 259.0 31.3 326 76-427 34-409 (584)
25 2weu_A Tryptophan 5-halogenase 99.9 1.9E-25 6.6E-30 247.6 29.1 324 77-436 2-401 (511)
26 3ihm_A Styrene monooxygenase A 99.9 2.7E-26 9.3E-31 248.5 19.4 325 77-436 22-372 (430)
27 2aqj_A Tryptophan halogenase, 99.9 2E-25 7E-30 248.7 25.8 325 76-435 4-392 (538)
28 2e4g_A Tryptophan halogenase; 99.9 2.8E-25 9.6E-30 247.9 25.3 328 76-437 24-425 (550)
29 4h87_A Kanadaptin; FHA domain 99.8 9.8E-21 3.4E-25 166.8 10.0 101 527-642 18-129 (130)
30 2bry_A NEDD9 interacting prote 99.8 1.1E-19 3.7E-24 199.8 18.8 137 75-250 90-236 (497)
31 3va4_A Mediator of DNA damage 99.8 3.3E-19 1.1E-23 157.3 10.5 98 530-645 26-127 (132)
32 1uht_A Expressed protein; FHA 99.8 1E-18 3.5E-23 152.4 11.8 94 529-637 12-107 (118)
33 3gqs_A Adenylate cyclase-like 99.8 1.9E-18 6.6E-23 147.4 11.2 98 527-644 2-102 (106)
34 3po8_A RV0020C protein, putati 99.8 1.6E-18 5.4E-23 146.4 10.0 82 543-642 16-97 (100)
35 2pie_A E3 ubiquitin-protein li 99.8 2.6E-18 9E-23 153.8 11.4 103 525-644 5-117 (138)
36 2xt9_B Putative signal transdu 99.8 4E-18 1.4E-22 147.7 11.1 95 527-643 9-104 (115)
37 2kb3_A Oxoglutarate dehydrogen 99.7 4.4E-18 1.5E-22 152.3 10.6 92 525-635 42-134 (143)
38 2jqj_A DNA damage response pro 99.7 3.6E-18 1.2E-22 155.4 10.0 101 526-645 14-123 (151)
39 3els_A PRE-mRNA leakage protei 99.7 3.2E-18 1.1E-22 155.6 8.7 101 527-635 29-146 (158)
40 1dmz_A Protein (protein kinase 99.7 6.6E-18 2.2E-22 154.3 10.2 104 527-644 2-125 (158)
41 2csw_A Ubiquitin ligase protei 99.7 3.4E-18 1.2E-22 154.3 7.8 93 525-633 13-110 (145)
42 1mzk_A Kinase associated prote 99.7 2.7E-17 9.4E-22 147.3 13.1 85 543-637 20-115 (139)
43 1gxc_A CHK2, CDS1, serine/thre 99.7 2E-17 6.7E-22 150.0 12.0 103 525-645 25-142 (149)
44 2jpe_A Nuclear inhibitor of pr 99.7 1.4E-18 4.7E-23 156.1 4.1 99 528-641 33-134 (140)
45 2kfu_A RV1827 PThr 22; FHA dom 99.7 1.2E-17 3.9E-22 152.2 10.1 90 527-635 53-143 (162)
46 3oun_A Putative uncharacterize 99.7 7.2E-18 2.5E-22 151.7 7.9 86 531-635 68-153 (157)
47 1lgp_A Cell cycle checkpoint p 99.7 1.6E-17 5.4E-22 144.4 9.7 100 529-644 3-111 (116)
48 3elv_A PRE-mRNA leakage protei 99.7 1E-17 3.5E-22 156.2 8.3 101 527-635 76-193 (205)
49 1yvv_A Amine oxidase, flavin-c 99.7 8E-16 2.7E-20 160.5 23.8 297 77-403 2-329 (336)
50 1r21_A Antigen KI-67; beta san 99.7 1.4E-17 4.8E-22 147.3 8.1 83 543-644 26-108 (128)
51 3hx1_A SLR1951 protein; P74513 99.7 3.2E-17 1.1E-21 144.8 9.7 81 543-640 23-113 (131)
52 1qu5_A Protein kinase SPK1; FH 99.7 1.6E-17 5.4E-22 154.7 7.3 106 525-644 24-149 (182)
53 1wln_A Afadin; beta sandwich, 99.7 3E-16 1E-20 136.8 11.3 84 543-644 29-114 (120)
54 1g3g_A Protien kinase SPK1; FH 99.7 1.7E-16 6E-21 146.0 8.9 80 554-644 64-148 (164)
55 1g6g_A Protein kinase RAD53; b 99.7 5.7E-16 2E-20 136.5 11.8 80 554-644 36-120 (127)
56 2ff4_A Probable regulatory pro 99.6 2.2E-15 7.6E-20 159.8 9.3 88 543-649 299-386 (388)
57 3fm8_A Kinesin-like protein KI 99.6 2E-14 6.8E-19 124.5 11.7 100 525-642 22-122 (124)
58 3huf_A DNA repair and telomere 99.5 1.9E-14 6.5E-19 141.3 11.1 102 529-644 1-114 (325)
59 4ejq_A Kinesin-like protein KI 99.5 5.2E-14 1.8E-18 127.8 11.6 105 527-644 36-144 (154)
60 1ryi_A Glycine oxidase; flavop 99.4 2.3E-12 7.8E-17 136.8 19.4 194 185-399 159-361 (382)
61 2gag_B Heterotetrameric sarcos 99.4 1.1E-11 3.8E-16 132.5 21.8 64 186-250 170-237 (405)
62 3k30_A Histamine dehydrogenase 99.4 1.9E-13 6.6E-18 156.2 5.6 97 12-110 323-424 (690)
63 3kkj_A Amine oxidase, flavin-c 99.4 2.9E-12 1E-16 128.6 13.7 35 77-111 2-36 (336)
64 1y56_B Sarcosine oxidase; dehy 99.4 8.1E-12 2.8E-16 132.5 17.6 64 186-250 145-212 (382)
65 3pvc_A TRNA 5-methylaminomethy 99.3 1.6E-11 5.3E-16 140.5 17.4 62 184-245 406-470 (689)
66 3ps9_A TRNA 5-methylaminomethy 99.3 5.6E-11 1.9E-15 135.7 21.6 62 184-245 411-474 (676)
67 3dme_A Conserved exported prot 99.3 1.1E-10 3.9E-15 122.7 21.5 66 185-250 145-216 (369)
68 2gf3_A MSOX, monomeric sarcosi 99.3 1.4E-10 4.9E-15 123.1 21.0 60 185-245 145-206 (389)
69 3uv0_A Mutator 2, isoform B; F 99.3 4.2E-12 1.4E-16 101.9 6.5 70 553-637 20-96 (102)
70 2oln_A NIKD protein; flavoprot 99.3 4.9E-10 1.7E-14 119.4 24.9 65 185-250 148-215 (397)
71 4a0e_A YSCD, type III secretio 99.3 9.8E-12 3.4E-16 105.4 8.9 94 528-644 3-98 (123)
72 1o94_A Tmadh, trimethylamine d 99.3 1.9E-12 6.4E-17 148.7 4.6 98 12-111 320-423 (729)
73 1ps9_A 2,4-dienoyl-COA reducta 99.3 3.1E-12 1.1E-16 145.9 6.3 97 12-110 309-406 (671)
74 3nyc_A D-arginine dehydrogenas 99.2 2.9E-10 1E-14 120.2 20.6 65 185-250 149-216 (381)
75 2qcu_A Aerobic glycerol-3-phos 99.2 7.2E-10 2.5E-14 121.8 23.7 65 185-249 144-216 (501)
76 3kt9_A Aprataxin; FHA domain, 99.2 1.4E-10 4.8E-15 95.7 10.9 84 543-643 15-100 (102)
77 3v76_A Flavoprotein; structura 99.2 1.4E-10 4.8E-15 124.0 13.3 146 74-244 24-187 (417)
78 2brf_A Bifunctional polynucleo 99.1 4.7E-10 1.6E-14 93.4 11.4 85 543-643 20-106 (110)
79 1rp0_A ARA6, thiazole biosynth 99.1 8.5E-10 2.9E-14 111.9 15.9 138 76-250 38-197 (284)
80 2i0z_A NAD(FAD)-utilizing dehy 99.1 7.7E-11 2.6E-15 127.7 7.8 164 76-250 25-208 (447)
81 3nlc_A Uncharacterized protein 99.1 3.9E-10 1.3E-14 124.0 13.3 58 188-245 218-278 (549)
82 3dje_A Fructosyl amine: oxygen 99.1 8.5E-10 2.9E-14 119.2 15.6 61 185-245 156-222 (438)
83 3da1_A Glycerol-3-phosphate de 99.1 1.5E-09 5E-14 120.8 17.4 65 186-250 166-239 (561)
84 3jsk_A Cypbp37 protein; octame 99.1 1.3E-09 4.5E-14 111.8 15.2 138 76-250 78-257 (344)
85 3i6d_A Protoporphyrinogen oxid 99.1 4.3E-09 1.5E-13 114.6 19.5 56 191-246 236-291 (470)
86 3axb_A Putative oxidoreductase 99.0 6.1E-09 2.1E-13 112.8 19.6 66 184-250 175-261 (448)
87 2uzz_A N-methyl-L-tryptophan o 99.0 1E-09 3.4E-14 115.8 12.9 60 185-245 144-205 (372)
88 2cul_A Glucose-inhibited divis 99.0 1.7E-09 6E-14 106.1 13.2 125 76-250 2-131 (232)
89 3i6u_A CDS1, serine/threonine- 99.0 6.2E-10 2.1E-14 119.6 9.8 100 527-644 7-121 (419)
90 3ces_A MNMG, tRNA uridine 5-ca 99.0 2.7E-09 9.1E-14 118.3 14.6 154 76-249 27-186 (651)
91 1qo8_A Flavocytochrome C3 fuma 99.0 4.1E-09 1.4E-13 117.6 16.2 63 188-250 248-318 (566)
92 1yj5_C 5' polynucleotide kinas 99.0 4.1E-09 1.4E-13 90.7 11.8 96 530-644 10-107 (143)
93 1ujx_A Polynucleotide kinase 3 99.0 9.7E-10 3.3E-14 92.6 7.6 96 530-644 17-114 (119)
94 3c4n_A Uncharacterized protein 99.0 9.7E-10 3.3E-14 117.5 9.5 65 185-250 167-244 (405)
95 2ywl_A Thioredoxin reductase r 99.0 3.6E-09 1.2E-13 99.3 12.2 113 78-250 2-116 (180)
96 4a9w_A Monooxygenase; baeyer-v 99.0 2.3E-09 7.7E-14 112.1 11.7 128 76-245 2-133 (357)
97 3cp8_A TRNA uridine 5-carboxym 99.0 3.5E-09 1.2E-13 117.3 13.4 151 76-247 20-177 (641)
98 1y0p_A Fumarate reductase flav 99.0 9.7E-09 3.3E-13 114.7 17.2 62 189-250 254-323 (571)
99 2zbw_A Thioredoxin reductase; 98.9 2.1E-09 7E-14 111.6 10.6 122 76-250 4-127 (335)
100 2gqf_A Hypothetical protein HI 98.9 2.8E-09 9.5E-14 113.5 11.6 144 76-244 3-168 (401)
101 2zxi_A TRNA uridine 5-carboxym 98.9 6.8E-09 2.3E-13 114.6 14.8 154 76-249 26-185 (637)
102 3ab1_A Ferredoxin--NADP reduct 98.9 2.2E-09 7.4E-14 112.7 10.5 122 76-250 13-137 (360)
103 2gv8_A Monooxygenase; FMO, FAD 98.9 1.5E-09 5.1E-14 117.6 9.4 60 186-245 111-178 (447)
104 4dgk_A Phytoene dehydrogenase; 98.9 1.2E-07 4.2E-12 104.0 23.6 47 204-250 237-284 (501)
105 1d4d_A Flavocytochrome C fumar 98.9 5.2E-08 1.8E-12 108.6 20.3 62 189-250 254-323 (572)
106 3fbs_A Oxidoreductase; structu 98.9 7.6E-09 2.6E-13 105.1 12.0 110 78-246 3-114 (297)
107 4egx_A Kinesin-like protein KI 98.9 1.4E-08 4.8E-13 94.4 12.1 102 529-644 68-174 (184)
108 2gjc_A Thiazole biosynthetic e 98.9 3E-08 1E-12 101.2 15.1 138 76-250 64-245 (326)
109 1w4x_A Phenylacetone monooxyge 98.8 6.9E-09 2.4E-13 115.1 10.6 136 76-246 15-156 (542)
110 3nrn_A Uncharacterized protein 98.8 1.6E-07 5.5E-12 100.7 19.8 54 191-246 190-245 (421)
111 3itj_A Thioredoxin reductase 1 98.8 8.3E-09 2.8E-13 107.0 9.3 121 74-246 19-144 (338)
112 3qj4_A Renalase; FAD/NAD(P)-bi 98.8 2.7E-08 9.1E-13 103.6 13.2 145 78-243 2-164 (342)
113 1kf6_A Fumarate reductase flav 98.8 5.5E-08 1.9E-12 108.8 16.5 61 190-250 134-203 (602)
114 2q0l_A TRXR, thioredoxin reduc 98.8 2.1E-08 7.1E-13 102.8 12.1 113 78-247 2-117 (311)
115 1c0p_A D-amino acid oxidase; a 98.8 1E-07 3.5E-12 100.0 17.6 35 76-110 5-39 (363)
116 4ap3_A Steroid monooxygenase; 98.8 9.6E-09 3.3E-13 113.8 9.9 136 75-245 19-160 (549)
117 3gwf_A Cyclohexanone monooxyge 98.8 1.1E-08 3.9E-13 112.9 10.4 136 76-246 7-149 (540)
118 1pj5_A N,N-dimethylglycine oxi 98.8 4.2E-08 1.4E-12 114.5 14.9 62 185-247 146-210 (830)
119 3lov_A Protoporphyrinogen oxid 98.8 1E-07 3.4E-12 104.0 16.6 55 191-246 237-291 (475)
120 4fk1_A Putative thioredoxin re 98.8 4.3E-08 1.5E-12 100.3 12.7 36 74-109 3-38 (304)
121 3ka7_A Oxidoreductase; structu 98.8 2.3E-07 8E-12 99.4 18.9 56 191-247 197-255 (425)
122 3f8d_A Thioredoxin reductase ( 98.8 3.2E-08 1.1E-12 101.8 11.6 110 76-245 14-126 (323)
123 3lzw_A Ferredoxin--NADP reduct 98.7 4E-08 1.4E-12 101.5 12.1 115 77-245 7-124 (332)
124 1vdc_A NTR, NADPH dependent th 98.7 1.4E-08 4.8E-13 105.2 8.6 118 76-246 7-126 (333)
125 2xve_A Flavin-containing monoo 98.7 1.7E-08 5.7E-13 109.7 9.4 149 78-247 3-169 (464)
126 3uox_A Otemo; baeyer-villiger 98.7 1.9E-08 6.4E-13 111.3 8.7 136 76-246 8-149 (545)
127 3cty_A Thioredoxin reductase; 98.7 5.6E-08 1.9E-12 100.0 11.4 112 76-246 15-128 (319)
128 2q7v_A Thioredoxin reductase; 98.7 7.1E-08 2.4E-12 99.5 11.7 112 76-245 7-124 (325)
129 3g3e_A D-amino-acid oxidase; F 98.7 1.2E-07 4.1E-12 99.0 12.9 34 78-111 1-40 (351)
130 3s5w_A L-ornithine 5-monooxyge 98.6 1.3E-07 4.3E-12 102.9 12.8 148 76-245 29-193 (463)
131 1chu_A Protein (L-aspartate ox 98.6 8.5E-08 2.9E-12 106.0 11.2 35 76-111 7-41 (540)
132 2rgh_A Alpha-glycerophosphate 98.6 7E-07 2.4E-11 99.4 18.5 35 76-110 31-65 (571)
133 4at0_A 3-ketosteroid-delta4-5a 98.6 5.2E-07 1.8E-11 99.2 16.9 37 75-111 39-75 (510)
134 2a87_A TRXR, TR, thioredoxin r 98.6 9.7E-08 3.3E-12 99.0 10.4 114 75-246 12-128 (335)
135 2e5v_A L-aspartate oxidase; ar 98.6 3.8E-07 1.3E-11 99.1 15.3 31 79-109 1-31 (472)
136 3d1c_A Flavin-containing putat 98.6 1.6E-07 5.4E-12 98.7 11.9 138 76-245 3-144 (369)
137 1trb_A Thioredoxin reductase; 98.6 1E-07 3.5E-12 98.0 10.0 113 76-246 4-118 (320)
138 1fl2_A Alkyl hydroperoxide red 98.6 1.3E-07 4.6E-12 96.6 10.8 111 78-246 2-117 (310)
139 4a5l_A Thioredoxin reductase; 98.5 3.3E-07 1.1E-11 93.8 12.0 117 76-244 3-121 (314)
140 2h88_A Succinate dehydrogenase 98.5 1.4E-06 4.9E-11 97.3 17.9 36 76-111 17-52 (621)
141 3ics_A Coenzyme A-disulfide re 98.5 2.7E-07 9.3E-12 103.4 11.8 133 56-244 14-152 (588)
142 3cgb_A Pyridine nucleotide-dis 98.5 2.7E-07 9.2E-12 100.7 10.9 133 57-245 15-153 (480)
143 2wdq_A Succinate dehydrogenase 98.5 1.6E-06 5.4E-11 96.8 17.3 37 76-112 6-42 (588)
144 1hyu_A AHPF, alkyl hydroperoxi 98.5 6E-07 2E-11 98.9 12.2 113 75-245 210-327 (521)
145 1wv3_A Similar to DNA segregat 98.5 1.3E-07 4.4E-12 92.1 5.7 67 553-635 91-163 (238)
146 2bs2_A Quinol-fumarate reducta 98.4 2.6E-06 8.9E-11 95.9 16.8 36 76-111 4-39 (660)
147 2ivd_A PPO, PPOX, protoporphyr 98.4 4.9E-07 1.7E-11 98.6 10.0 54 191-245 239-295 (478)
148 3k7m_X 6-hydroxy-L-nicotine ox 98.4 3.4E-07 1.2E-11 98.4 8.5 48 194-243 211-258 (431)
149 2a8x_A Dihydrolipoyl dehydroge 98.4 9E-07 3.1E-11 96.1 11.5 33 77-109 3-35 (464)
150 1v59_A Dihydrolipoamide dehydr 98.4 9.6E-07 3.3E-11 96.3 10.9 35 76-110 4-38 (478)
151 1s3e_A Amine oxidase [flavin-c 98.4 2.2E-06 7.5E-11 94.5 13.8 54 191-245 216-269 (520)
152 4gcm_A TRXR, thioredoxin reduc 98.4 3E-07 1E-11 94.2 6.3 34 76-109 5-38 (312)
153 4gut_A Lysine-specific histone 98.3 3.4E-06 1.2E-10 96.7 14.1 40 204-243 545-584 (776)
154 1ojt_A Surface protein; redox- 98.3 2E-06 6.7E-11 93.9 11.0 35 76-110 5-39 (482)
155 1q1r_A Putidaredoxin reductase 98.3 1.8E-06 6.1E-11 92.8 9.8 111 77-246 4-116 (431)
156 3r9u_A Thioredoxin reductase; 98.3 2.3E-06 7.9E-11 87.4 10.2 111 76-244 3-118 (315)
157 1dxl_A Dihydrolipoamide dehydr 98.3 4.2E-06 1.4E-10 91.0 12.7 35 76-110 5-39 (470)
158 3klj_A NAD(FAD)-dependent dehy 98.2 4.6E-06 1.6E-10 88.0 11.5 109 75-243 7-115 (385)
159 1jnr_A Adenylylsulfate reducta 98.2 1E-05 3.4E-10 91.3 14.7 36 76-111 21-60 (643)
160 3iwa_A FAD-dependent pyridine 98.2 3.2E-06 1.1E-10 92.0 9.6 35 77-111 3-39 (472)
161 1ebd_A E3BD, dihydrolipoamide 98.2 3.1E-06 1.1E-10 91.6 9.1 33 77-109 3-35 (455)
162 3gyx_A Adenylylsulfate reducta 98.2 1.3E-05 4.3E-10 90.3 13.7 36 76-111 21-62 (662)
163 3qfa_A Thioredoxin reductase 1 98.1 1.7E-05 5.7E-10 87.3 13.3 38 73-110 28-65 (519)
164 3ntd_A FAD-dependent pyridine 98.1 8.1E-06 2.8E-10 90.9 10.5 111 78-244 2-117 (565)
165 2bc0_A NADH oxidase; flavoprot 98.1 1E-05 3.5E-10 88.4 10.9 34 77-110 35-71 (490)
166 3oc4_A Oxidoreductase, pyridin 98.1 8.2E-06 2.8E-10 88.2 9.9 34 78-111 3-38 (452)
167 3ef6_A Toluene 1,2-dioxygenase 98.1 1.2E-05 4.2E-10 85.6 10.8 106 78-243 3-110 (410)
168 3lxd_A FAD-dependent pyridine 98.1 8E-06 2.7E-10 87.2 9.3 36 76-111 8-45 (415)
169 2v3a_A Rubredoxin reductase; a 98.1 1.9E-05 6.5E-10 83.3 12.0 101 77-246 145-245 (384)
170 3kd9_A Coenzyme A disulfide re 98.1 1.1E-05 3.7E-10 87.1 10.2 34 77-110 3-38 (449)
171 3sx6_A Sulfide-quinone reducta 98.0 7.1E-06 2.4E-10 88.3 8.7 33 78-110 5-40 (437)
172 2yqu_A 2-oxoglutarate dehydrog 98.0 2.8E-05 9.6E-10 84.0 12.9 100 77-246 167-266 (455)
173 3ayj_A Pro-enzyme of L-phenyla 98.0 2.3E-06 7.7E-11 96.2 4.0 75 31-110 14-97 (721)
174 2gqw_A Ferredoxin reductase; f 98.0 1.2E-05 4.1E-10 85.6 9.5 35 76-110 6-42 (408)
175 1nhp_A NADH peroxidase; oxidor 98.0 1.8E-05 6.2E-10 85.3 11.1 33 78-110 1-35 (447)
176 1zmd_A Dihydrolipoyl dehydroge 98.0 2.2E-05 7.4E-10 85.4 11.4 35 76-110 5-39 (474)
177 3l8k_A Dihydrolipoyl dehydroge 98.0 2.9E-05 9.9E-10 84.2 12.1 34 77-110 4-37 (466)
178 3fg2_P Putative rubredoxin red 98.0 1.8E-05 6.3E-10 84.0 10.3 33 78-110 2-36 (404)
179 2cdu_A NADPH oxidase; flavoenz 98.0 1.9E-05 6.5E-10 85.3 10.4 33 78-110 1-35 (452)
180 2eq6_A Pyruvate dehydrogenase 98.0 4.1E-05 1.4E-09 82.9 12.7 100 77-246 169-273 (464)
181 3g5s_A Methylenetetrahydrofola 98.0 3E-05 1E-09 79.9 10.7 33 78-110 2-34 (443)
182 4b63_A L-ornithine N5 monooxyg 97.9 2.6E-05 9E-10 85.3 10.6 57 186-242 141-212 (501)
183 3fpz_A Thiazole biosynthetic e 97.9 4.9E-06 1.7E-10 85.7 4.5 37 75-111 63-101 (326)
184 3h28_A Sulfide-quinone reducta 97.9 4.6E-05 1.6E-09 81.7 12.3 34 78-111 3-38 (430)
185 3dgh_A TRXR-1, thioredoxin red 97.9 6.3E-05 2.1E-09 81.9 13.2 35 75-109 7-41 (483)
186 1xhc_A NADH oxidase /nitrite r 97.9 2.3E-05 7.7E-10 82.2 9.3 33 77-110 8-40 (367)
187 3dgz_A Thioredoxin reductase 2 97.9 3.9E-05 1.3E-09 83.7 11.4 35 76-110 5-39 (488)
188 1m6i_A Programmed cell death p 97.9 5.8E-06 2E-10 90.3 4.5 37 75-111 9-47 (493)
189 1ges_A Glutathione reductase; 97.9 6.6E-05 2.3E-09 80.9 12.5 100 77-246 167-267 (450)
190 3hyw_A Sulfide-quinone reducta 97.9 3.4E-05 1.1E-09 82.7 9.6 33 78-110 3-37 (430)
191 3h8l_A NADH oxidase; membrane 97.9 7.4E-05 2.5E-09 79.5 12.2 33 78-110 2-37 (409)
192 4gde_A UDP-galactopyranose mut 97.8 8.4E-06 2.9E-10 89.5 4.5 54 190-245 222-277 (513)
193 2r9z_A Glutathione amide reduc 97.8 0.0001 3.6E-09 79.7 13.1 100 77-246 166-266 (463)
194 4g6h_A Rotenone-insensitive NA 97.8 2.3E-05 7.9E-10 85.6 7.5 36 75-110 40-75 (502)
195 1xdi_A RV3303C-LPDA; reductase 97.8 7E-05 2.4E-09 81.9 11.3 34 77-110 2-38 (499)
196 4b1b_A TRXR, thioredoxin reduc 97.8 0.00013 4.3E-09 80.2 12.7 35 77-111 42-76 (542)
197 2v3a_A Rubredoxin reductase; a 97.8 3.6E-05 1.2E-09 81.2 8.1 34 77-110 4-39 (384)
198 3s5w_A L-ornithine 5-monooxyge 97.8 0.00019 6.6E-09 77.5 14.1 142 77-245 227-378 (463)
199 4eqs_A Coenzyme A disulfide re 97.8 7.1E-05 2.4E-09 80.3 10.2 32 79-110 2-35 (437)
200 2bcg_G Secretory pathway GDP d 97.8 2.1E-05 7.1E-10 85.0 5.9 36 76-111 10-45 (453)
201 2b9w_A Putative aminooxidase; 97.7 2.6E-05 8.8E-10 83.4 5.9 53 191-245 207-259 (424)
202 2e1m_A L-glutamate oxidase; L- 97.7 2.7E-05 9.2E-10 81.3 5.8 35 75-109 42-76 (376)
203 1ebd_A E3BD, dihydrolipoamide 97.7 0.00018 6E-09 77.7 12.2 99 77-245 170-271 (455)
204 1v59_A Dihydrolipoamide dehydr 97.7 0.00019 6.6E-09 77.9 12.4 100 77-246 183-289 (478)
205 3o0h_A Glutathione reductase; 97.7 2.2E-05 7.5E-10 85.6 4.9 34 76-109 25-58 (484)
206 3urh_A Dihydrolipoyl dehydroge 97.7 2.7E-05 9.3E-10 85.0 5.2 37 74-110 22-58 (491)
207 1ojt_A Surface protein; redox- 97.6 0.00019 6.4E-09 78.1 11.4 100 77-246 185-288 (482)
208 3vrd_B FCCB subunit, flavocyto 97.6 0.00018 6.2E-09 76.1 11.1 33 78-110 3-37 (401)
209 2hqm_A GR, grase, glutathione 97.6 0.00029 9.8E-09 76.6 12.7 100 77-246 185-287 (479)
210 3dk9_A Grase, GR, glutathione 97.6 2.8E-05 9.5E-10 84.6 4.6 36 74-109 17-52 (478)
211 2jae_A L-amino acid oxidase; o 97.6 4.3E-05 1.5E-09 83.4 6.0 53 191-243 240-295 (489)
212 1rsg_A FMS1 protein; FAD bindi 97.6 3E-05 1E-09 85.3 4.5 56 190-245 202-258 (516)
213 2yg5_A Putrescine oxidase; oxi 97.6 3E-05 1E-09 83.7 4.4 56 191-249 216-272 (453)
214 1v0j_A UDP-galactopyranose mut 97.6 4.2E-05 1.4E-09 81.1 5.4 35 76-110 6-41 (399)
215 3lad_A Dihydrolipoamide dehydr 97.6 3.9E-05 1.3E-09 83.4 5.1 35 76-110 2-36 (476)
216 1nhp_A NADH peroxidase; oxidor 97.6 0.00032 1.1E-08 75.5 12.2 100 76-246 148-248 (447)
217 3o0h_A Glutathione reductase; 97.6 0.00036 1.2E-08 75.9 12.6 100 77-246 191-290 (484)
218 3lxd_A FAD-dependent pyridine 97.6 0.00062 2.1E-08 72.4 14.1 101 77-246 152-253 (415)
219 3hdq_A UDP-galactopyranose mut 97.6 5E-05 1.7E-09 79.9 5.4 36 75-110 27-62 (397)
220 3fg2_P Putative rubredoxin red 97.6 0.00062 2.1E-08 72.1 14.0 100 77-245 142-242 (404)
221 1y56_A Hypothetical protein PH 97.6 9.7E-05 3.3E-09 80.6 7.9 110 76-245 107-220 (493)
222 4dna_A Probable glutathione re 97.6 3.9E-05 1.3E-09 83.1 4.6 34 76-109 4-37 (463)
223 1q1r_A Putidaredoxin reductase 97.6 0.00057 2E-08 73.1 13.6 100 77-245 149-251 (431)
224 1onf_A GR, grase, glutathione 97.5 0.00045 1.5E-08 75.5 12.8 100 77-246 176-277 (500)
225 3nks_A Protoporphyrinogen oxid 97.5 4.8E-05 1.6E-09 82.6 4.9 53 192-245 236-291 (477)
226 3ef6_A Toluene 1,2-dioxygenase 97.5 0.00031 1.1E-08 74.6 11.0 100 77-245 143-242 (410)
227 2vdc_G Glutamate synthase [NAD 97.5 6.6E-05 2.3E-09 80.9 5.6 36 75-110 120-155 (456)
228 3ic9_A Dihydrolipoamide dehydr 97.5 0.00076 2.6E-08 73.5 13.8 97 77-244 174-274 (492)
229 1xdi_A RV3303C-LPDA; reductase 97.5 0.00054 1.9E-08 74.8 12.7 100 77-246 182-281 (499)
230 2vvm_A Monoamine oxidase N; FA 97.5 8.8E-05 3E-09 81.0 6.2 55 191-245 256-313 (495)
231 2a8x_A Dihydrolipoyl dehydroge 97.5 0.00063 2.2E-08 73.5 12.8 99 77-245 171-272 (464)
232 1mo9_A ORF3; nucleotide bindin 97.5 0.00057 1.9E-08 75.1 12.5 99 78-246 215-318 (523)
233 2qae_A Lipoamide, dihydrolipoy 97.5 0.00063 2.2E-08 73.6 12.7 101 77-246 174-278 (468)
234 3iwa_A FAD-dependent pyridine 97.5 0.00067 2.3E-08 73.5 12.9 100 77-245 159-259 (472)
235 1sez_A Protoporphyrinogen oxid 97.5 6.9E-05 2.4E-09 82.0 5.2 36 76-111 12-47 (504)
236 2wpf_A Trypanothione reductase 97.5 0.00065 2.2E-08 74.0 12.7 100 77-246 191-294 (495)
237 3ic9_A Dihydrolipoamide dehydr 97.5 4.9E-05 1.7E-09 82.9 3.7 34 77-110 8-41 (492)
238 2bi7_A UDP-galactopyranose mut 97.5 8.2E-05 2.8E-09 78.4 5.2 35 77-111 3-37 (384)
239 4b1b_A TRXR, thioredoxin reduc 97.5 0.00082 2.8E-08 73.8 13.3 100 77-247 223-322 (542)
240 1mo9_A ORF3; nucleotide bindin 97.4 0.0001 3.4E-09 81.2 5.8 36 75-110 41-76 (523)
241 1zk7_A HGII, reductase, mercur 97.4 9.6E-05 3.3E-09 80.1 5.6 34 76-109 3-36 (467)
242 2eq6_A Pyruvate dehydrogenase 97.4 7.1E-05 2.4E-09 81.0 4.5 34 77-110 6-39 (464)
243 2gqw_A Ferredoxin reductase; f 97.4 0.0011 3.6E-08 70.4 13.6 96 77-245 145-240 (408)
244 1zmd_A Dihydrolipoyl dehydroge 97.4 0.00072 2.5E-08 73.3 12.5 101 77-246 178-284 (474)
245 1fec_A Trypanothione reductase 97.4 0.00066 2.3E-08 73.9 12.1 100 77-246 187-290 (490)
246 2hqm_A GR, grase, glutathione 97.4 7.8E-05 2.7E-09 81.1 4.7 34 76-109 10-43 (479)
247 3ntd_A FAD-dependent pyridine 97.4 0.00086 2.9E-08 74.4 13.2 34 77-110 151-184 (565)
248 1i8t_A UDP-galactopyranose mut 97.4 7.6E-05 2.6E-09 78.1 4.3 33 78-110 2-34 (367)
249 2iid_A L-amino-acid oxidase; f 97.4 0.00011 3.7E-09 80.3 5.7 52 191-243 242-297 (498)
250 2r9z_A Glutathione amide reduc 97.4 9.2E-05 3.1E-09 80.1 5.0 34 76-109 3-36 (463)
251 1dxl_A Dihydrolipoamide dehydr 97.4 0.0005 1.7E-08 74.5 10.9 99 77-245 177-280 (470)
252 4dsg_A UDP-galactopyranose mut 97.4 0.00011 3.7E-09 80.0 5.6 57 189-247 215-273 (484)
253 2qae_A Lipoamide, dihydrolipoy 97.4 9.7E-05 3.3E-09 80.1 5.0 34 77-110 2-35 (468)
254 1lvl_A Dihydrolipoamide dehydr 97.4 0.0005 1.7E-08 74.2 10.5 97 77-245 171-269 (458)
255 1ges_A Glutathione reductase; 97.4 9E-05 3.1E-09 79.9 4.4 34 76-109 3-36 (450)
256 1onf_A GR, grase, glutathione 97.4 0.00013 4.3E-09 79.8 5.2 34 77-110 2-35 (500)
257 3pl8_A Pyranose 2-oxidase; sub 97.3 0.00012 4.1E-09 82.0 5.0 36 76-111 45-80 (623)
258 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00013 4.6E-09 78.3 5.1 36 75-110 18-53 (475)
259 3l8k_A Dihydrolipoyl dehydroge 97.3 0.0011 3.7E-08 71.7 12.1 98 77-246 172-274 (466)
260 1d5t_A Guanine nucleotide diss 97.3 0.00017 5.9E-09 77.2 5.8 54 191-245 235-291 (433)
261 2cdu_A NADPH oxidase; flavoenz 97.3 0.0018 6.2E-08 69.6 13.9 101 77-246 149-249 (452)
262 2yqu_A 2-oxoglutarate dehydrog 97.3 0.00013 4.4E-09 78.7 4.8 33 78-110 2-34 (455)
263 3urh_A Dihydrolipoyl dehydroge 97.3 0.0015 5E-08 71.2 13.2 99 77-245 198-301 (491)
264 1lvl_A Dihydrolipoamide dehydr 97.3 0.00014 4.7E-09 78.6 4.6 34 76-109 4-37 (458)
265 1m6i_A Programmed cell death p 97.3 0.0018 6E-08 70.5 13.2 100 77-245 180-283 (493)
266 3oc4_A Oxidoreductase, pyridin 97.3 0.0021 7E-08 69.2 13.6 98 77-244 147-244 (452)
267 1zk7_A HGII, reductase, mercur 97.3 0.0018 6.1E-08 70.0 12.9 98 77-246 176-273 (467)
268 3lad_A Dihydrolipoamide dehydr 97.2 0.002 6.7E-08 69.8 13.0 99 77-245 180-281 (476)
269 3cgb_A Pyridine nucleotide-dis 97.2 0.0018 6.1E-08 70.2 12.7 35 76-110 185-219 (480)
270 1fec_A Trypanothione reductase 97.2 0.00019 6.6E-09 78.2 4.8 32 77-108 3-35 (490)
271 2wpf_A Trypanothione reductase 97.2 0.00019 6.7E-09 78.2 4.4 33 76-108 6-39 (495)
272 2bc0_A NADH oxidase; flavoprot 97.2 0.0027 9.1E-08 69.1 13.2 35 76-110 193-227 (490)
273 2x8g_A Thioredoxin glutathione 97.2 0.00024 8.2E-09 79.5 5.0 35 75-109 105-139 (598)
274 1trb_A Thioredoxin reductase; 97.2 0.0023 7.8E-08 65.1 11.9 34 77-110 145-178 (320)
275 1kdg_A CDH, cellobiose dehydro 97.1 0.00029 9.9E-09 77.9 5.0 35 76-110 6-40 (546)
276 2z3y_A Lysine-specific histone 97.1 0.00038 1.3E-08 78.7 6.1 36 75-110 105-140 (662)
277 1lqt_A FPRA; NADP+ derivative, 97.1 0.00026 8.8E-09 76.3 4.4 36 76-111 2-44 (456)
278 4dna_A Probable glutathione re 97.1 0.0026 8.8E-08 68.6 12.2 98 77-245 170-269 (463)
279 2xag_A Lysine-specific histone 97.1 0.00049 1.7E-08 79.4 6.5 37 75-111 276-312 (852)
280 1xhc_A NADH oxidase /nitrite r 97.1 0.0016 5.6E-08 67.9 9.7 33 78-110 144-176 (367)
281 2q0l_A TRXR, thioredoxin reduc 97.0 0.0032 1.1E-07 63.6 11.7 34 77-110 143-176 (311)
282 3d1c_A Flavin-containing putat 97.0 0.0031 1.1E-07 65.5 11.8 107 77-245 166-273 (369)
283 3itj_A Thioredoxin reductase 1 97.0 0.0017 5.9E-08 66.4 9.7 34 77-110 173-206 (338)
284 1b37_A Protein (polyamine oxid 97.0 0.00044 1.5E-08 74.9 5.2 55 191-245 207-271 (472)
285 3dk9_A Grase, GR, glutathione 97.0 0.0037 1.3E-07 67.7 12.3 99 77-245 187-294 (478)
286 3kd9_A Coenzyme A disulfide re 97.0 0.0034 1.2E-07 67.4 11.8 98 77-245 148-245 (449)
287 3ics_A Coenzyme A-disulfide re 97.0 0.0034 1.2E-07 69.9 12.3 98 77-246 187-284 (588)
288 4eqs_A Coenzyme A disulfide re 97.0 0.0041 1.4E-07 66.5 12.0 34 77-110 147-180 (437)
289 1cjc_A Protein (adrenodoxin re 97.0 0.00055 1.9E-08 73.8 5.2 36 76-111 5-42 (460)
290 1gte_A Dihydropyrimidine dehyd 96.9 0.00054 1.8E-08 81.4 5.3 35 76-110 186-221 (1025)
291 3t37_A Probable dehydrogenase; 96.9 0.00044 1.5E-08 76.0 4.0 35 76-110 16-51 (526)
292 2gag_A Heterotetrameric sarcos 96.9 0.00059 2E-08 80.5 4.8 36 76-111 127-162 (965)
293 3dgh_A TRXR-1, thioredoxin red 96.8 0.0072 2.5E-07 65.5 12.7 97 77-244 187-289 (483)
294 1ju2_A HydroxynitrIle lyase; f 96.8 0.00044 1.5E-08 76.1 2.9 35 76-111 25-59 (536)
295 3q9t_A Choline dehydrogenase a 96.8 0.0007 2.4E-08 74.9 4.5 36 76-111 5-41 (577)
296 3gwf_A Cyclohexanone monooxyge 96.6 0.012 4E-07 64.7 12.7 36 76-111 177-212 (540)
297 1coy_A Cholesterol oxidase; ox 96.6 0.0015 5.2E-08 71.3 5.6 36 75-110 9-44 (507)
298 3qvp_A Glucose oxidase; oxidor 96.6 0.001 3.5E-08 73.5 4.2 35 76-110 18-53 (583)
299 2zbw_A Thioredoxin reductase; 96.6 0.007 2.4E-07 61.9 10.3 34 77-110 152-185 (335)
300 3dgz_A Thioredoxin reductase 2 96.6 0.011 3.8E-07 64.1 12.3 33 77-109 185-217 (488)
301 3r9u_A Thioredoxin reductase; 96.6 0.013 4.4E-07 59.1 12.1 34 77-110 147-180 (315)
302 1fl2_A Alkyl hydroperoxide red 96.6 0.0067 2.3E-07 61.2 9.8 34 77-110 144-177 (310)
303 2q7v_A Thioredoxin reductase; 96.6 0.01 3.4E-07 60.5 11.2 34 77-110 152-185 (325)
304 1n4w_A CHOD, cholesterol oxida 96.6 0.0014 4.9E-08 71.5 4.8 35 76-110 4-38 (504)
305 3ab1_A Ferredoxin--NADP reduct 96.5 0.0063 2.1E-07 63.0 9.4 34 77-110 163-196 (360)
306 3f8d_A Thioredoxin reductase ( 96.5 0.0094 3.2E-07 60.3 10.4 34 77-110 154-187 (323)
307 1vdc_A NTR, NADPH dependent th 96.5 0.0093 3.2E-07 60.8 10.4 34 77-110 159-192 (333)
308 3fim_B ARYL-alcohol oxidase; A 96.4 0.0013 4.3E-08 72.7 2.7 35 77-111 2-37 (566)
309 1gpe_A Protein (glucose oxidas 96.3 0.0023 7.9E-08 71.1 4.8 37 75-111 22-59 (587)
310 2a87_A TRXR, TR, thioredoxin r 96.2 0.013 4.3E-07 60.0 9.4 34 77-110 155-188 (335)
311 3cty_A Thioredoxin reductase; 96.2 0.027 9.3E-07 57.0 11.7 34 77-110 155-188 (319)
312 3uox_A Otemo; baeyer-villiger 96.2 0.0049 1.7E-07 67.8 6.4 36 76-111 184-219 (545)
313 2jbv_A Choline oxidase; alcoho 96.2 0.0028 9.4E-08 69.9 4.3 35 76-110 12-47 (546)
314 4g6h_A Rotenone-insensitive NA 96.0 0.019 6.4E-07 62.5 9.8 36 363-401 365-400 (502)
315 3qfa_A Thioredoxin reductase 1 96.0 0.05 1.7E-06 59.4 13.3 33 77-109 210-242 (519)
316 2gv8_A Monooxygenase; FMO, FAD 96.0 0.014 4.7E-07 62.5 8.5 33 77-109 212-245 (447)
317 2x8g_A Thioredoxin glutathione 95.9 0.053 1.8E-06 60.3 13.2 33 77-109 286-318 (598)
318 3fwz_A Inner membrane protein 95.9 0.0098 3.3E-07 52.5 5.6 35 77-111 7-41 (140)
319 2g1u_A Hypothetical protein TM 95.7 0.011 3.9E-07 53.0 5.6 35 77-111 19-53 (155)
320 1vg0_A RAB proteins geranylger 95.7 0.0088 3E-07 66.3 5.7 36 76-111 7-42 (650)
321 4ap3_A Steroid monooxygenase; 95.7 0.02 6.7E-07 63.0 8.3 36 76-111 190-225 (549)
322 3llv_A Exopolyphosphatase-rela 95.6 0.011 3.9E-07 52.0 4.8 33 78-110 7-39 (141)
323 3lzw_A Ferredoxin--NADP reduct 95.5 0.036 1.2E-06 56.2 9.2 34 77-110 154-187 (332)
324 4b63_A L-ornithine N5 monooxyg 95.5 0.16 5.3E-06 55.1 14.5 34 77-110 246-281 (501)
325 3fbs_A Oxidoreductase; structu 95.4 0.042 1.4E-06 54.7 9.1 32 77-109 141-172 (297)
326 1lss_A TRK system potassium up 95.4 0.016 5.4E-07 50.7 5.1 33 78-110 5-37 (140)
327 1id1_A Putative potassium chan 95.3 0.018 6.1E-07 51.5 5.4 34 77-110 3-36 (153)
328 1hyu_A AHPF, alkyl hydroperoxi 95.3 0.045 1.5E-06 59.8 9.6 34 77-110 355-388 (521)
329 3ic5_A Putative saccharopine d 94.9 0.024 8.1E-07 47.8 4.7 33 78-110 6-39 (118)
330 4a9w_A Monooxygenase; baeyer-v 94.9 0.017 5.8E-07 59.3 4.4 33 77-110 163-195 (357)
331 3k30_A Histamine dehydrogenase 94.9 0.065 2.2E-06 60.7 9.6 34 77-110 523-558 (690)
332 4gcm_A TRXR, thioredoxin reduc 94.8 0.02 6.9E-07 57.8 4.7 34 77-110 145-178 (312)
333 3klj_A NAD(FAD)-dependent dehy 94.5 0.029 9.8E-07 58.7 5.0 35 77-111 146-180 (385)
334 1lqt_A FPRA; NADP+ derivative, 94.5 0.17 5.7E-06 54.2 11.1 34 77-110 147-201 (456)
335 2hmt_A YUAA protein; RCK, KTN, 94.5 0.032 1.1E-06 48.8 4.6 33 78-110 7-39 (144)
336 3c85_A Putative glutathione-re 94.3 0.039 1.3E-06 50.9 4.9 34 77-110 39-73 (183)
337 4a5l_A Thioredoxin reductase; 94.3 0.032 1.1E-06 56.1 4.7 34 77-110 152-185 (314)
338 1f0y_A HCDH, L-3-hydroxyacyl-C 93.9 0.058 2E-06 54.3 5.6 33 78-110 16-48 (302)
339 3ado_A Lambda-crystallin; L-gu 93.9 0.046 1.6E-06 55.2 4.7 34 77-110 6-39 (319)
340 3l4b_C TRKA K+ channel protien 93.8 0.043 1.5E-06 52.3 4.1 33 79-111 2-34 (218)
341 1ps9_A 2,4-dienoyl-COA reducta 93.7 0.21 7.1E-06 56.3 10.3 29 77-105 494-522 (671)
342 2dpo_A L-gulonate 3-dehydrogen 93.6 0.053 1.8E-06 55.0 4.7 34 77-110 6-39 (319)
343 1pzg_A LDH, lactate dehydrogen 93.6 0.076 2.6E-06 54.2 5.8 34 77-110 9-43 (331)
344 1o94_A Tmadh, trimethylamine d 93.5 0.18 6E-06 57.5 9.4 34 77-110 528-563 (729)
345 4e12_A Diketoreductase; oxidor 93.5 0.078 2.7E-06 52.8 5.7 33 78-110 5-37 (283)
346 3lk7_A UDP-N-acetylmuramoylala 93.3 0.073 2.5E-06 56.9 5.4 35 76-110 8-42 (451)
347 1gte_A Dihydropyrimidine dehyd 93.1 0.57 1.9E-05 55.5 13.0 33 78-110 333-366 (1025)
348 2x5o_A UDP-N-acetylmuramoylala 93.0 0.057 1.9E-06 57.5 4.0 35 77-111 5-39 (439)
349 2gag_A Heterotetrameric sarcos 93.0 0.23 7.7E-06 58.5 9.4 33 78-110 285-317 (965)
350 3i83_A 2-dehydropantoate 2-red 92.9 0.093 3.2E-06 53.3 5.2 32 78-109 3-34 (320)
351 3dfz_A SIRC, precorrin-2 dehyd 92.8 0.074 2.5E-06 50.7 4.0 36 74-109 28-63 (223)
352 3ghy_A Ketopantoate reductase 92.7 0.1 3.4E-06 53.4 5.2 32 78-109 4-35 (335)
353 3k96_A Glycerol-3-phosphate de 92.6 0.1 3.5E-06 53.8 5.1 35 76-110 28-62 (356)
354 2raf_A Putative dinucleotide-b 92.5 0.13 4.4E-06 48.6 5.3 35 77-111 19-53 (209)
355 1lld_A L-lactate dehydrogenase 92.5 0.11 3.9E-06 52.5 5.3 33 78-110 8-42 (319)
356 1kyq_A Met8P, siroheme biosynt 92.5 0.073 2.5E-06 52.4 3.6 34 76-109 12-45 (274)
357 2y0c_A BCEC, UDP-glucose dehyd 92.5 0.11 3.7E-06 55.9 5.3 34 77-110 8-41 (478)
358 3tl2_A Malate dehydrogenase; c 92.4 0.14 4.7E-06 51.8 5.6 34 76-109 7-41 (315)
359 1ks9_A KPA reductase;, 2-dehyd 92.3 0.13 4.4E-06 51.2 5.3 32 79-110 2-33 (291)
360 3doj_A AT3G25530, dehydrogenas 92.3 0.15 5E-06 51.5 5.7 35 77-111 21-55 (310)
361 3vtf_A UDP-glucose 6-dehydroge 92.2 0.16 5.4E-06 53.6 5.9 35 77-111 21-55 (444)
362 2ewd_A Lactate dehydrogenase,; 92.1 0.14 4.9E-06 51.8 5.4 34 77-110 4-38 (317)
363 2ew2_A 2-dehydropantoate 2-red 92.1 0.13 4.5E-06 51.7 5.2 33 78-110 4-36 (316)
364 3hn2_A 2-dehydropantoate 2-red 92.1 0.11 3.7E-06 52.5 4.5 32 78-109 3-34 (312)
365 1bg6_A N-(1-D-carboxylethyl)-L 91.9 0.14 4.9E-06 52.6 5.3 34 77-110 4-37 (359)
366 4g65_A TRK system potassium up 91.9 0.06 2E-06 57.6 2.4 35 77-111 3-37 (461)
367 4dio_A NAD(P) transhydrogenase 91.9 0.16 5.5E-06 52.8 5.5 34 77-110 190-223 (405)
368 2hjr_A Malate dehydrogenase; m 91.9 0.17 5.7E-06 51.5 5.5 33 78-110 15-48 (328)
369 3gg2_A Sugar dehydrogenase, UD 91.6 0.15 5.2E-06 54.3 5.2 34 78-111 3-36 (450)
370 3g79_A NDP-N-acetyl-D-galactos 91.6 0.15 5.3E-06 54.4 5.2 35 77-111 18-54 (478)
371 3gvi_A Malate dehydrogenase; N 91.6 0.19 6.5E-06 50.9 5.5 35 76-110 6-41 (324)
372 3e8x_A Putative NAD-dependent 91.6 0.19 6.4E-06 48.2 5.3 36 75-110 19-55 (236)
373 3eag_A UDP-N-acetylmuramate:L- 91.5 0.17 5.7E-06 51.5 5.1 33 78-110 5-38 (326)
374 4a7p_A UDP-glucose dehydrogena 91.5 0.18 6.1E-06 53.5 5.4 35 77-111 8-42 (446)
375 1t2d_A LDH-P, L-lactate dehydr 91.4 0.2 7E-06 50.7 5.7 33 78-110 5-38 (322)
376 3k6j_A Protein F01G10.3, confi 91.4 0.23 7.9E-06 52.7 6.2 34 77-110 54-87 (460)
377 3p2y_A Alanine dehydrogenase/p 91.4 0.17 5.9E-06 52.1 5.0 35 76-110 183-217 (381)
378 2v6b_A L-LDH, L-lactate dehydr 91.4 0.18 6.2E-06 50.7 5.2 32 79-110 2-35 (304)
379 3ggo_A Prephenate dehydrogenas 91.4 0.22 7.5E-06 50.3 5.8 35 76-110 32-68 (314)
380 1zej_A HBD-9, 3-hydroxyacyl-CO 91.2 0.17 5.7E-06 50.5 4.7 34 76-110 11-44 (293)
381 3qsg_A NAD-binding phosphogluc 91.2 0.17 5.9E-06 51.0 4.8 34 76-109 23-57 (312)
382 3g0o_A 3-hydroxyisobutyrate de 91.1 0.18 6.3E-06 50.6 4.9 34 77-110 7-40 (303)
383 3pef_A 6-phosphogluconate dehy 91.1 0.22 7.4E-06 49.6 5.4 34 78-111 2-35 (287)
384 3dtt_A NADP oxidoreductase; st 91.0 0.22 7.5E-06 48.3 5.2 36 76-111 18-53 (245)
385 3g17_A Similar to 2-dehydropan 90.9 0.15 5.1E-06 51.0 4.0 33 78-110 3-35 (294)
386 2uyy_A N-PAC protein; long-cha 90.9 0.27 9.1E-06 49.7 5.9 34 77-110 30-63 (316)
387 3oj0_A Glutr, glutamyl-tRNA re 90.9 0.091 3.1E-06 46.3 2.1 34 77-110 21-54 (144)
388 2xve_A Flavin-containing monoo 90.9 0.18 6.3E-06 54.0 4.9 34 77-110 197-230 (464)
389 3l9w_A Glutathione-regulated p 90.8 0.18 6.3E-06 52.9 4.8 35 77-111 4-38 (413)
390 1jw9_B Molybdopterin biosynthe 90.8 0.2 7E-06 48.7 4.8 34 77-110 31-65 (249)
391 3pid_A UDP-glucose 6-dehydroge 90.7 0.18 6.2E-06 53.1 4.6 34 77-111 36-69 (432)
392 3pqe_A L-LDH, L-lactate dehydr 90.7 0.24 8.1E-06 50.2 5.3 33 77-109 5-39 (326)
393 3p7m_A Malate dehydrogenase; p 90.7 0.27 9.2E-06 49.7 5.7 35 76-110 4-39 (321)
394 1zcj_A Peroxisomal bifunctiona 90.6 0.23 8E-06 53.1 5.4 34 77-110 37-70 (463)
395 1mv8_A GMD, GDP-mannose 6-dehy 90.5 0.19 6.6E-06 53.3 4.6 32 79-110 2-33 (436)
396 1y6j_A L-lactate dehydrogenase 90.4 0.26 8.9E-06 49.8 5.3 34 77-110 7-42 (318)
397 2vns_A Metalloreductase steap3 90.4 0.27 9.2E-06 46.6 5.1 34 77-110 28-61 (215)
398 4dll_A 2-hydroxy-3-oxopropiona 90.3 0.21 7.3E-06 50.6 4.6 34 77-110 31-64 (320)
399 3qha_A Putative oxidoreductase 90.3 0.18 6.1E-06 50.5 4.0 34 77-110 15-48 (296)
400 4e21_A 6-phosphogluconate dehy 90.2 0.27 9.2E-06 50.6 5.3 35 76-110 21-55 (358)
401 3hwr_A 2-dehydropantoate 2-red 90.2 0.26 9E-06 49.8 5.1 32 77-109 19-50 (318)
402 4huj_A Uncharacterized protein 90.1 0.18 6.1E-06 48.0 3.6 33 78-110 24-57 (220)
403 1z82_A Glycerol-3-phosphate de 90.1 0.27 9.4E-06 50.1 5.3 33 77-109 14-46 (335)
404 1guz_A Malate dehydrogenase; o 90.1 0.28 9.7E-06 49.4 5.3 32 79-110 2-35 (310)
405 3ego_A Probable 2-dehydropanto 90.0 0.27 9.2E-06 49.5 5.1 32 78-110 3-34 (307)
406 3dfu_A Uncharacterized protein 90.0 0.1 3.5E-06 50.0 1.8 32 77-108 6-37 (232)
407 3gpi_A NAD-dependent epimerase 89.9 0.31 1.1E-05 48.1 5.4 34 78-111 4-37 (286)
408 1x13_A NAD(P) transhydrogenase 89.9 0.31 1.1E-05 51.0 5.5 34 77-110 172-205 (401)
409 3mog_A Probable 3-hydroxybutyr 89.7 0.3 1E-05 52.5 5.3 34 77-110 5-38 (483)
410 2qyt_A 2-dehydropantoate 2-red 89.6 0.22 7.4E-06 50.2 4.0 31 78-108 9-45 (317)
411 3d0o_A L-LDH 1, L-lactate dehy 89.6 0.31 1.1E-05 49.2 5.1 34 76-109 5-40 (317)
412 1txg_A Glycerol-3-phosphate de 89.5 0.27 9.4E-06 49.9 4.7 30 79-108 2-31 (335)
413 3pdu_A 3-hydroxyisobutyrate de 89.5 0.25 8.5E-06 49.1 4.3 33 79-111 3-35 (287)
414 1ldn_A L-lactate dehydrogenase 89.5 0.37 1.3E-05 48.6 5.6 34 76-109 5-40 (316)
415 1pjc_A Protein (L-alanine dehy 89.4 0.34 1.2E-05 50.0 5.4 34 77-110 167-200 (361)
416 2vdc_G Glutamate synthase [NAD 89.4 0.35 1.2E-05 51.6 5.5 35 76-110 263-298 (456)
417 1l7d_A Nicotinamide nucleotide 89.3 0.36 1.2E-05 50.2 5.5 35 76-110 171-205 (384)
418 4id9_A Short-chain dehydrogena 89.3 0.32 1.1E-05 49.5 5.1 39 73-111 15-54 (347)
419 1oju_A MDH, malate dehydrogena 89.3 0.32 1.1E-05 48.5 4.8 32 79-110 2-35 (294)
420 3l6d_A Putative oxidoreductase 89.2 0.43 1.5E-05 47.9 5.8 34 77-110 9-42 (306)
421 1hdo_A Biliverdin IX beta redu 89.0 0.48 1.6E-05 43.9 5.7 34 78-111 4-38 (206)
422 2zyd_A 6-phosphogluconate dehy 88.9 0.31 1.1E-05 52.3 4.8 36 75-110 13-48 (480)
423 2eez_A Alanine dehydrogenase; 88.9 0.4 1.4E-05 49.6 5.4 35 76-110 165-199 (369)
424 1ur5_A Malate dehydrogenase; o 88.8 0.41 1.4E-05 48.2 5.3 33 78-110 3-36 (309)
425 1a5z_A L-lactate dehydrogenase 88.8 0.35 1.2E-05 48.9 4.8 32 79-110 2-35 (319)
426 3ldh_A Lactate dehydrogenase; 88.7 0.57 2E-05 47.3 6.3 33 77-109 21-55 (330)
427 1jay_A Coenzyme F420H2:NADP+ o 88.7 0.39 1.3E-05 45.1 4.8 32 79-110 2-34 (212)
428 3ius_A Uncharacterized conserv 88.7 0.35 1.2E-05 47.7 4.7 33 78-110 6-38 (286)
429 3ew7_A LMO0794 protein; Q8Y8U8 88.6 0.45 1.6E-05 44.7 5.3 32 79-110 2-34 (221)
430 3h8l_A NADH oxidase; membrane 88.6 1.4 4.8E-05 46.0 9.6 37 204-244 234-270 (409)
431 2h78_A Hibadh, 3-hydroxyisobut 88.6 0.36 1.2E-05 48.3 4.7 33 78-110 4-36 (302)
432 1nyt_A Shikimate 5-dehydrogena 88.6 0.46 1.6E-05 46.7 5.4 33 77-109 119-151 (271)
433 1dlj_A UDP-glucose dehydrogena 88.5 0.3 1E-05 51.2 4.2 31 79-110 2-32 (402)
434 1cjc_A Protein (adrenodoxin re 88.5 0.41 1.4E-05 51.1 5.4 35 77-111 145-200 (460)
435 2rcy_A Pyrroline carboxylate r 88.5 0.4 1.4E-05 46.7 4.9 34 78-111 5-42 (262)
436 4gwg_A 6-phosphogluconate dehy 88.4 0.43 1.5E-05 51.1 5.3 35 77-111 4-38 (484)
437 4ezb_A Uncharacterized conserv 88.4 0.37 1.3E-05 48.7 4.6 33 78-110 25-58 (317)
438 4b4o_A Epimerase family protei 88.3 0.47 1.6E-05 47.2 5.3 33 78-110 1-34 (298)
439 2f1k_A Prephenate dehydrogenas 88.2 0.46 1.6E-05 46.8 5.2 32 79-110 2-33 (279)
440 2aef_A Calcium-gated potassium 88.1 0.21 7.1E-06 48.0 2.5 34 77-111 9-42 (234)
441 3vku_A L-LDH, L-lactate dehydr 88.1 0.47 1.6E-05 48.0 5.1 34 76-109 8-43 (326)
442 3h2s_A Putative NADH-flavin re 88.0 0.5 1.7E-05 44.6 5.1 32 79-110 2-34 (224)
443 2q3e_A UDP-glucose 6-dehydroge 87.9 0.39 1.3E-05 51.5 4.7 34 78-111 6-41 (467)
444 2o3j_A UDP-glucose 6-dehydroge 87.9 0.42 1.5E-05 51.3 5.0 34 78-111 10-45 (481)
445 3cky_A 2-hydroxymethyl glutara 87.8 0.43 1.5E-05 47.6 4.7 34 77-110 4-37 (301)
446 3nep_X Malate dehydrogenase; h 87.8 0.47 1.6E-05 47.8 4.9 33 78-110 1-35 (314)
447 1x0v_A GPD-C, GPDH-C, glycerol 87.8 0.3 1E-05 50.1 3.6 33 78-110 9-48 (354)
448 1vpd_A Tartronate semialdehyde 87.8 0.42 1.4E-05 47.6 4.6 33 78-110 6-38 (299)
449 1hyh_A L-hicdh, L-2-hydroxyiso 87.8 0.44 1.5E-05 47.9 4.8 33 78-110 2-36 (309)
450 1yqg_A Pyrroline-5-carboxylate 87.6 0.48 1.6E-05 46.2 4.8 32 79-110 2-34 (263)
451 2vhw_A Alanine dehydrogenase; 87.6 0.53 1.8E-05 48.8 5.4 35 76-110 167-201 (377)
452 3ojo_A CAP5O; rossmann fold, c 87.6 0.37 1.3E-05 50.8 4.2 34 78-111 12-45 (431)
453 4ffl_A PYLC; amino acid, biosy 87.5 0.52 1.8E-05 48.5 5.2 34 78-111 2-35 (363)
454 2i6t_A Ubiquitin-conjugating e 87.5 0.5 1.7E-05 47.3 4.9 33 78-110 15-49 (303)
455 3tri_A Pyrroline-5-carboxylate 87.4 0.6 2.1E-05 46.2 5.5 34 77-110 3-39 (280)
456 2pv7_A T-protein [includes: ch 87.4 0.49 1.7E-05 47.3 4.8 33 78-110 22-55 (298)
457 3ktd_A Prephenate dehydrogenas 87.4 0.53 1.8E-05 48.0 5.1 33 78-110 9-41 (341)
458 2a9f_A Putative malic enzyme ( 87.3 0.53 1.8E-05 48.4 5.0 34 76-109 187-221 (398)
459 3phh_A Shikimate dehydrogenase 87.3 0.65 2.2E-05 45.5 5.4 34 77-110 118-151 (269)
460 2egg_A AROE, shikimate 5-dehyd 87.2 0.56 1.9E-05 46.8 5.1 34 77-110 141-175 (297)
461 1pjq_A CYSG, siroheme synthase 87.1 0.52 1.8E-05 50.2 5.0 34 76-109 11-44 (457)
462 4aj2_A L-lactate dehydrogenase 87.0 0.67 2.3E-05 47.0 5.5 34 76-109 18-53 (331)
463 2p4q_A 6-phosphogluconate dehy 87.0 0.59 2E-05 50.3 5.4 35 77-111 10-44 (497)
464 3h8v_A Ubiquitin-like modifier 86.9 0.55 1.9E-05 46.6 4.8 35 76-110 35-70 (292)
465 2g5c_A Prephenate dehydrogenas 86.9 0.61 2.1E-05 46.0 5.2 32 79-110 3-36 (281)
466 2gf2_A Hibadh, 3-hydroxyisobut 86.9 0.52 1.8E-05 46.9 4.7 32 79-110 2-33 (296)
467 1ez4_A Lactate dehydrogenase; 86.8 0.64 2.2E-05 46.9 5.3 34 76-109 4-39 (318)
468 3c24_A Putative oxidoreductase 86.8 0.73 2.5E-05 45.6 5.7 33 78-110 12-45 (286)
469 1evy_A Glycerol-3-phosphate de 86.8 0.33 1.1E-05 50.2 3.2 32 79-110 17-48 (366)
470 2izz_A Pyrroline-5-carboxylate 86.8 0.56 1.9E-05 47.4 4.9 34 77-110 22-59 (322)
471 2pgd_A 6-phosphogluconate dehy 86.7 0.59 2E-05 50.2 5.2 33 78-110 3-35 (482)
472 2pzm_A Putative nucleotide sug 86.6 0.71 2.4E-05 46.6 5.6 35 76-110 19-54 (330)
473 3dhn_A NAD-dependent epimerase 86.5 0.58 2E-05 44.2 4.6 34 78-111 5-39 (227)
474 1vl6_A Malate oxidoreductase; 86.3 0.64 2.2E-05 47.7 5.0 34 76-109 191-225 (388)
475 2wtb_A MFP2, fatty acid multif 86.3 0.62 2.1E-05 52.7 5.4 33 78-110 313-345 (725)
476 3fi9_A Malate dehydrogenase; s 86.3 0.75 2.6E-05 46.8 5.5 33 77-109 8-43 (343)
477 1p77_A Shikimate 5-dehydrogena 86.2 0.54 1.9E-05 46.3 4.3 34 77-110 119-152 (272)
478 3ond_A Adenosylhomocysteinase; 86.2 0.64 2.2E-05 49.4 5.0 35 76-110 264-298 (488)
479 2iz1_A 6-phosphogluconate dehy 86.1 0.68 2.3E-05 49.6 5.3 34 77-110 5-38 (474)
480 1yj8_A Glycerol-3-phosphate de 86.0 0.49 1.7E-05 49.0 4.1 33 78-110 22-61 (375)
481 2hk9_A Shikimate dehydrogenase 85.9 0.67 2.3E-05 45.7 4.8 34 77-110 129-162 (275)
482 2cvz_A Dehydrogenase, 3-hydrox 85.8 0.56 1.9E-05 46.4 4.2 31 79-110 3-33 (289)
483 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.7 0.67 2.3E-05 49.7 5.0 33 78-110 2-34 (478)
484 3rui_A Ubiquitin-like modifier 85.6 0.81 2.8E-05 46.3 5.2 35 77-111 34-69 (340)
485 2rir_A Dipicolinate synthase, 85.5 0.84 2.9E-05 45.6 5.4 35 76-110 156-190 (300)
486 3c7a_A Octopine dehydrogenase; 85.5 0.43 1.5E-05 50.0 3.3 30 78-107 3-33 (404)
487 3d4o_A Dipicolinate synthase s 85.5 0.84 2.9E-05 45.4 5.4 35 76-110 154-188 (293)
488 4gbj_A 6-phosphogluconate dehy 85.5 0.56 1.9E-05 46.8 4.0 34 78-111 6-39 (297)
489 3o38_A Short chain dehydrogena 85.4 1 3.6E-05 43.8 6.0 36 75-110 20-57 (266)
490 1zud_1 Adenylyltransferase THI 85.3 0.74 2.5E-05 44.7 4.7 34 77-110 28-62 (251)
491 2zqz_A L-LDH, L-lactate dehydr 85.3 0.83 2.8E-05 46.2 5.2 34 76-109 8-43 (326)
492 3d1l_A Putative NADP oxidoredu 85.3 0.73 2.5E-05 45.0 4.7 33 78-110 11-44 (266)
493 3l5a_A NADH/flavin oxidoreduct 85.2 0.14 4.7E-06 53.9 -0.6 33 12-44 345-377 (419)
494 1edz_A 5,10-methylenetetrahydr 85.2 0.69 2.4E-05 46.4 4.5 35 76-110 176-211 (320)
495 3don_A Shikimate dehydrogenase 85.1 0.66 2.3E-05 45.7 4.3 36 76-111 116-152 (277)
496 4e4t_A Phosphoribosylaminoimid 85.0 1.1 3.7E-05 47.2 6.1 36 75-110 33-68 (419)
497 1np3_A Ketol-acid reductoisome 84.9 0.87 3E-05 46.4 5.2 33 78-110 17-49 (338)
498 1wdk_A Fatty oxidation complex 84.7 0.76 2.6E-05 51.9 5.1 34 77-110 314-347 (715)
499 3gt0_A Pyrroline-5-carboxylate 84.7 0.95 3.2E-05 43.7 5.2 33 78-110 3-39 (247)
500 3vps_A TUNA, NAD-dependent epi 84.7 0.92 3.2E-05 45.3 5.3 35 77-111 7-42 (321)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=4.5e-42 Score=370.50 Aligned_cols=369 Identities=27% Similarity=0.367 Sum_probs=272.9
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccC
Q 006025 73 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (664)
Q Consensus 73 ~~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~ 152 (664)
...+++||+||||||+|+++|+.|+++|++|+|+||.+.+.. ...++.+.++++++|+.+ |+++++...+....
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~----~~~~~~l~~~~~~~l~~l--g~~~~~~~~~~~~~ 92 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP----VGAAISVWPNGVKCMAHL--GMGDIMETFGGPLR 92 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--------CEEEECHHHHHHHHHT--TCHHHHHHHSCCCC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC----cCeeEEECHHHHHHHHHC--CCHHHHHhhcCCCc
Confidence 345578999999999999999999999999999999864422 123688999999999999 78888877654322
Q ss_pred ccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEe
Q 006025 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (664)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~ 232 (664)
.+. +.+...+.....++........ .+..+.++|..|++.|.+.+....++++++|++++.++++|+|++.+|++++
T Consensus 93 -~~~-~~~~~~g~~~~~~~~~~~~~~~-~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 169 (407)
T 3rp8_A 93 -RMA-YRDFRSGENMTQFSLAPLIERT-GSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSAS 169 (407)
T ss_dssp -EEE-EEETTTCCEEEEEECHHHHHHH-SSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred -ceE-EEECCCCCEeEEecchhhhhhc-CCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEe
Confidence 221 2232223333333321100111 1235789999999999998865558899999999999999999999999999
Q ss_pred ccEEEEecCCchhhhhhhcCC-CCccccceEEEEEEeccCCCCccccceEEEecCeeEEEEeeCCCCeEEEEEEeeCCCC
Q 006025 233 GDLLIGADGIWSKVRKNLFGP-QEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAG 311 (664)
Q Consensus 233 adlvVgADG~~S~vR~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (664)
||+||+|||.+|.||+.+.+. ....|.++.++.+.............+..+.+++.+++.+|..++.+.|++....+..
T Consensus 170 a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 249 (407)
T 3rp8_A 170 GDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAG 249 (407)
T ss_dssp ESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT
T ss_pred eCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcC
Confidence 999999999999999999443 3566777677777655332223334556676777888888999998888877654443
Q ss_pred CCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhHHHHHHH
Q 006025 312 GVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGY 391 (664)
Q Consensus 312 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~al~Da~ 391 (664)
.........+.+.+.+..|.+.+.+.+..........+.++...+..+|..+||+|||||||.++|++|||+|+||+||.
T Consensus 250 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~ 329 (407)
T 3rp8_A 250 LAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAV 329 (407)
T ss_dssp CSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHH
Confidence 33334456788889999999988888877766555455566655667899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHHHHHHHHhhhhhccCCCcccceeeecccCC
Q 006025 392 QLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHP 467 (664)
Q Consensus 392 ~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~ 467 (664)
.|+++|... . +...+|+.|+++|++++..++..++.+..+. .....+...+|+..+...
T Consensus 330 ~La~~L~~~---------~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~-------~~~~~~~~~~R~~~l~~~ 388 (407)
T 3rp8_A 330 VLGAVFRQT---------R-DIAAALREYEAQRCDRVRDLVLKARKRCDIT-------HGKDMQLTEAWYQELREE 388 (407)
T ss_dssp HHHHHHHSC---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------TTTTHHHHHHHHHHHHSC
T ss_pred HHHHHHhcC---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------hcCCHHHHHHHHHHHhhc
Confidence 999999842 1 4578999999999999999888876544332 233344567777766543
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=1.5e-40 Score=358.64 Aligned_cols=348 Identities=22% Similarity=0.319 Sum_probs=231.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHH---hccccCcc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMR---AGCVTGDR 154 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~---~~~~~~~~ 154 (664)
++|+||||||+||++|+.|+++|++|+||||.+.+.... .+.++.++++++++|+.+ ++.+.+.. ........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~--~G~~i~l~~~~~~~L~~l--g~~~~~~~~~~~~~~~~~~ 77 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSIL--PGYGIHINSFGKQALQEC--LPAENWLAFEEASRYIGGQ 77 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSC--CCCEEEECHHHHHHHHHH--SCHHHHHHHHHHCEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCC--CceEEeeCHHHHHHHHHc--CChHHHHHhhhhhcccCcc
Confidence 589999999999999999999999999999986543221 123688999999999999 44444432 21111111
Q ss_pred ccccccCCCCceeeeccCCCcc-cccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCC-eEEEEEcCCcEEe
Q 006025 155 INGLVDGISGSWYIKFDTFTPA-AEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~-~v~v~~~~g~~i~ 232 (664)
.. +.+. ............+. ........+.++|..|+++|.+.++.. ++++++|+++++.++ +++|+++||++++
T Consensus 78 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~-v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ 154 (412)
T 4hb9_A 78 SR-FYNE-RMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANT-IQWNKTFVRYEHIENGGIKIFFADGSHEN 154 (412)
T ss_dssp CE-EECT-TSCEEEC--------------CEEEEEHHHHHHHHHTTCTTT-EECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred ee-EecC-CcceecccCCccccccccccccceEeeHHHHHHHHHhhccce-EEEEEEEEeeeEcCCCeEEEEECCCCEEE
Confidence 11 1111 11111111000000 011112246789999999999988765 789999999987554 6999999999999
Q ss_pred ccEEEEecCCchhhhhhhcCCCCccccceEEEEEEeccCC-------CCccccceEEEec--CeeEEEE---eeC-----
Q 006025 233 GDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVP-------ADIESVGYRVFLG--HKQYFVS---SDV----- 295 (664)
Q Consensus 233 adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~---~~~----- 295 (664)
||+||||||++|.||+++.+.....+.+...+.+.....+ ..+.........+ .+..++. .+.
T Consensus 155 adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (412)
T 4hb9_A 155 VDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVE 234 (412)
T ss_dssp ESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSC
T ss_pred eeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEE
Confidence 9999999999999999997666666666666665543321 1111111111111 1111111 111
Q ss_pred ---CC--CeEEEEEEeeCCCCCCC----CCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEE
Q 006025 296 ---GA--GKMQWYAFHKEPAGGVD----GPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVT 366 (664)
Q Consensus 296 ---~~--~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~ 366 (664)
.. ....|............ ......+.+.+.+..|.+.+.+.+.......+..+......+..+|..|||+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv~ 314 (412)
T 4hb9_A 235 ASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTVT 314 (412)
T ss_dssp GGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSEE
T ss_pred EeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCEE
Confidence 11 11233332222111111 1223345667778899999988888776666666666666677789999999
Q ss_pred EEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHH
Q 006025 367 LLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (664)
Q Consensus 367 LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~ 438 (664)
|+|||||.|+|++|||+|+||+||.+|+++|+.+..+. .++..+|+.||++|++++..++++++..
T Consensus 315 LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~------~~~~~aL~~Ye~~R~~~~~~~~~~s~~~ 380 (412)
T 4hb9_A 315 LLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGH------EELVKAISDYEQQMRAYANEIVGISLRS 380 (412)
T ss_dssp ECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCC------cCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987642 3567899999999999999998887643
No 3
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=9e-37 Score=327.97 Aligned_cols=339 Identities=19% Similarity=0.232 Sum_probs=233.8
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCc-hHHHHHHhcChhHHHHHHHhccccC
Q 006025 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQS-NALAALEAIDLDVAEEVMRAGCVTG 152 (664)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~-~~~~~L~~l~~g~~~~~~~~~~~~~ 152 (664)
.+..+||+||||||+|+++|+.|+++|++|+|+||.+.+... ..+..+.+.+ ++.++|+.+ |+++++...+....
T Consensus 23 ~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~--~~g~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~~ 98 (398)
T 2xdo_A 23 LLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR--IFGGTLDLHKGSGQEAMKKA--GLLQTYYDLALPMG 98 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC--CCSCCEECCTTTHHHHHHHT--TCHHHHHHHCBCCC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc--ccCCeeeeCCccHHHHHHhc--ChHHHHHHhhcccc
Confidence 345689999999999999999999999999999998643221 1122455654 578999998 78888876553322
Q ss_pred ccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEe
Q 006025 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (664)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~ 232 (664)
. .+.+. .+....... .+.. +......++|..|.+.|.+.+....++++++|++++.++++++|++.+|++++
T Consensus 99 ~---~~~~~-~g~~~~~~~--~~~~--~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 170 (398)
T 2xdo_A 99 V---NIADE-KGNILSTKN--VKPE--NRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSET 170 (398)
T ss_dssp E---EEECS-SSEEEEECC--CGGG--TTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEE
T ss_pred e---EEECC-CCCchhhcc--cccc--CCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEe
Confidence 2 12221 222222210 0000 01112368999999999998865568899999999998888999999999999
Q ss_pred ccEEEEecCCchhhhhhhcCCCCccccceEEEEEEeccCC---CCc---cccceEEEecCeeEEEEeeCCCCeEEEEEEe
Q 006025 233 GDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVP---ADI---ESVGYRVFLGHKQYFVSSDVGAGKMQWYAFH 306 (664)
Q Consensus 233 adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (664)
||+||+|||.+|.+|+++. ...+.|.+..++.+...... ... ...++.++++++..++.++..++.+.|++..
T Consensus 171 ad~vV~AdG~~S~vR~~l~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~ 249 (398)
T 2xdo_A 171 ADLVILANGGMSKVRKFVT-DTEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISF 249 (398)
T ss_dssp ESEEEECSCTTCSCCTTTC-CCCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred cCEEEECCCcchhHHhhcc-CCCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEE
Confidence 9999999999999999884 33456666555555543210 000 0122334445566666677777777776655
Q ss_pred eCCCCCC-------CCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccC-C--cEEEEccCcCcCC
Q 006025 307 KEPAGGV-------DGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR-G--RVTLLGDSVHAMQ 376 (664)
Q Consensus 307 ~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~--rv~LvGDAAh~~~ 376 (664)
..+.... ..+....+.+.+.|..|.+.+.+.+.... .+..+.++......+|.. + ||+|+|||||.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~ 327 (398)
T 2xdo_A 250 KTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTL--SFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMP 327 (398)
T ss_dssp ECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCS--CCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCC
T ss_pred ecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcc--cceeeeeEeccCCCCcccCCCccEEEEeehhccCC
Confidence 4332111 11223345667778889888877775522 233444544444457765 5 9999999999999
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhh-HHHHHHHHHHHhhhHHHHHHHhHH
Q 006025 377 PNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPID-IVSALKSYERARRLRVAVIHGLAR 436 (664)
Q Consensus 377 P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~-~~~~L~~Ye~~R~~~~~~~~~~s~ 436 (664)
|++|||+|+||+||.+|+++|... ..+ ...+|+.|+++|++++..++..+.
T Consensus 328 P~~GqG~n~ai~Da~~La~~L~~~---------~~~~~~~~L~~Y~~~r~~~~~~~~~~s~ 379 (398)
T 2xdo_A 328 PFAGQGVNSGLVDALILSDNLADG---------KFNSIEEAVKNYEQQMFIYGKEAQEEST 379 (398)
T ss_dssp CTTSCSHHHHHHHHHHHHHHHHSC---------CSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHHHHHHHhc---------cCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999763 012 578999999999999998776554
No 4
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=8.5e-37 Score=328.06 Aligned_cols=331 Identities=21% Similarity=0.262 Sum_probs=225.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
+..+||+||||||+|+++|+.|+++|++|+|+||.+...... ..++.+.++++++|+.+ |+++ ..... ....
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~---~~g~~l~~~~~~~l~~~--g~~~--~~~~~-~~~~ 74 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGF---GTGIVVQPELVHYLLEQ--GVEL--DSISV-PSSS 74 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCC---SCEEECCHHHHHHHHHT--TCCG--GGTCB-CCCE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc---ccccccChhHHHHHHHc--CCcc--ccccc-cccc
Confidence 345799999999999999999999999999999986532222 23678899999999999 4444 12211 1111
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEecc
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~ad 234 (664)
+. +.+...+.....+. .+. ..+.+..|.+.|.+.+....++++++|++++.++++++|++.+|++++||
T Consensus 75 ~~-~~~~~~g~~~~~~~---------~~~-~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad 143 (397)
T 2vou_A 75 ME-YVDALTGERVGSVP---------ADW-RFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEAN 143 (397)
T ss_dssp EE-EEETTTCCEEEEEE---------CCC-CEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEES
T ss_pred eE-EEecCCCCcccccc---------Ccc-cccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECC
Confidence 11 11110122111111 111 24678899999998876556889999999999988999999999999999
Q ss_pred EEEEecCCchhhhhhhcCCCCccccceEEEEEEeccCCCCcc-----ccceEEEecCeeEEEEeeCCC--C----eEEEE
Q 006025 235 LLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFVPADIE-----SVGYRVFLGHKQYFVSSDVGA--G----KMQWY 303 (664)
Q Consensus 235 lvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~----~~~~~ 303 (664)
+||+|||.+|.||+.+. ...+.|.++.+|.++......+.. ...+.++.+++..++.++... + .+.|+
T Consensus 144 ~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (397)
T 2vou_A 144 WVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQ 222 (397)
T ss_dssp EEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEE
T ss_pred EEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEE
Confidence 99999999999999997 556677776777776643211111 123445556666666555543 2 45555
Q ss_pred EEeeCCCCC------CC--------------CCcchHHHHHHHHh-CCChhHHHHHHcCCccceeeeecccCCCCccccC
Q 006025 304 AFHKEPAGG------VD--------------GPEGKKERLLKIFE-GWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR 362 (664)
Q Consensus 304 ~~~~~~~~~------~~--------------~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 362 (664)
++...+... .. ......+.+.+.+. .|.+ +.+.+..... ...++++.. ...+|..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~-~~~~~~~ 298 (397)
T 2vou_A 223 WYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNASS--PFVTVVADA-TVDRMVH 298 (397)
T ss_dssp EEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCSS--CEEEEEEEB-CCSCSEE
T ss_pred EEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccCC--cceeeeeee-cCCceec
Confidence 554432210 00 01123344444443 4655 6665544432 123344443 4568999
Q ss_pred CcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHHH
Q 006025 363 GRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (664)
Q Consensus 363 ~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~ 439 (664)
|||+|+|||||.++|++|||+|+||+||..|+++|... .+...+|+.|+++|++++..++..++...
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~----------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~ 365 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN----------HDLRGSLQSWETRQLQQGHAYLNKVKKMA 365 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC----------SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999741 23478999999999999999888776543
No 5
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=5.6e-38 Score=350.30 Aligned_cols=375 Identities=18% Similarity=0.156 Sum_probs=242.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+||||.+.+... ..++.++++++++|+.+ |+++++...+.......
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~----~r~~~l~~~s~~~l~~l--Gl~~~l~~~~~~~~~~~ 121 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGH----DRAGALHIRTVETLDLR--GLLDRFLEGTQVAKGLP 121 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCS----SSCCCBCHHHHHHHHTT--TCHHHHTTSCCBCSBCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCC----ceEEEECHHHHHHHHHc--CChHHHHhcCcccCCce
Confidence 4589999999999999999999999999999998654322 23578999999999999 78888866553222110
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEE--cCC-cE
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG-QC 230 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~--~~g-~~ 230 (664)
..+... ....+. ......+..+.++|..|++.|.+.+. ...++++++|++++.++++|+|++ .+| ++
T Consensus 122 ---~~~~~~-~~~~~~----~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~ 193 (570)
T 3fmw_A 122 ---FAGIFT-QGLDFG----LVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYP 193 (570)
T ss_dssp ---BTTBCT-TCCBGG----GSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEE
T ss_pred ---eCCccc-cccccc----ccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEE
Confidence 111000 011111 11123445678999999999988763 235788999999999999999888 678 78
Q ss_pred EeccEEEEecCCchhhhhhhc-CCCCccccceEEEEEEeccCCCCccccceEEEecCeeEEEE-eeCCCCeE-EEEEEee
Q 006025 231 YAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVS-SDVGAGKM-QWYAFHK 307 (664)
Q Consensus 231 i~adlvVgADG~~S~vR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~ 307 (664)
++||+||+|||.+|.||+.+. ......|.. .++.......... ..+.+......+++. +|..++.+ .|++...
T Consensus 194 ~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~-~~~~~~v~~~~~~---~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~ 269 (570)
T 3fmw_A 194 VRARYGVGCDGGRSTVRRLAADRFPGTEATV-RALIGYVTTPERE---VPRRWERTPDGILVLAFPPEGGLGPGWSSSST 269 (570)
T ss_dssp EEESEEEECSCSSCHHHHHTTCCCCCCCCCE-EEEEEECCCCSCS---SCCCCCCCCSSCEEECCCC------CEEEEEE
T ss_pred EEeCEEEEcCCCCchHHHHcCCCCccceeee-EEEEEEEEecCCC---cceEEEecCCEEEEEEeecCCCeEEEEEEEeC
Confidence 999999999999999999983 333444543 3333333221111 112212223333444 57766654 4444333
Q ss_pred CCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCcc-ceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhHH
Q 006025 308 EPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMA 386 (664)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~a 386 (664)
.............+++.+.+..+.+.. +...... ....+.+.. ....+|..+||+|+|||||.++|++|||+|+|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~-~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~g 345 (570)
T 3fmw_A 270 GHSPAADEGPVTLEDLGAAVARVRGTP---LTLTEPVSWLSRFGDAS-RQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTG 345 (570)
T ss_dssp SCC-----CCCCHHHHHHHTTSSSSCC---CCCCSCCEEEEEECCCC-EECSCSEETTEEECGGGTEECCCCSSCHHHHH
T ss_pred CCCccccccCCCHHHHHHHHHHHhhcc---cccceeeeeeEEeeccc-ccccccccCCEEEEEecceecCCCcCcCHhHH
Confidence 222111112234567777776654321 1111111 122222222 23568899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHHHHHHHHhhhhhccCCCcccceeeecccC
Q 006025 387 IEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPH 466 (664)
Q Consensus 387 l~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~ 466 (664)
|+||.+|+|+|+.++++. ....+|+.|+++|++++..++..++. +..+|..+..+...+|++.+.+
T Consensus 346 l~DA~~La~~La~~~~g~-------~~~~lL~~Ye~eR~~~~~~~~~~s~~-------~~~l~~~~~~~~~~lR~~~~~l 411 (570)
T 3fmw_A 346 LQDAVNLGWKLAARVRGW-------GSEELLDTYHDERHPVAERVLLNTRA-------QLALMRPDEQHTTPLRGFVEEL 411 (570)
T ss_dssp HHHHHHHHHHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHSCSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhcCCchHHHHHHHHHHHH
Confidence 999999999999987642 23689999999999999987776643 2334544444477889888766
Q ss_pred CCccc--ceeeeehhhhhhHHhh
Q 006025 467 PGRVG--GRFFIDLAMPLMLSWV 487 (664)
Q Consensus 467 ~~~~~--~~~l~~~~~g~~l~~~ 487 (664)
. ..+ ++.++++++|+...|-
T Consensus 412 ~-~~~~~~~~~~~~~~g~~~~Y~ 433 (570)
T 3fmw_A 412 L-GTDEVNRYFTGMITGTDVRYA 433 (570)
T ss_dssp T-TSHHHHHHHHHHHHSTTCCCC
T ss_pred h-cCHHHHHHHHHHHhCCCcccC
Confidence 6 333 4777777777765553
No 6
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=8.5e-37 Score=336.41 Aligned_cols=331 Identities=17% Similarity=0.163 Sum_probs=218.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
...+||+||||||+||++|+.|+++|++|+||||.+.+... ..++.++++++++|+.+ |+++++... .. . .
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~-~-~ 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE----SRGLGFTARTMEVFDQR--GILPAFGPV-ET-S-T 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCC----CCSEEECHHHHHHHHHT--TCGGGGCSC-CE-E-S
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCC----CceeEECHHHHHHHHHC--CCHHHHHhc-cc-c-c
Confidence 35689999999999999999999999999999998654321 23678999999999998 666665432 10 0 0
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCc---
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ--- 229 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~--- 229 (664)
.. .. +.....+. ......+..+.++|..|++.|.+.+. ...++++++|+++++++++|+|++.+++
T Consensus 81 ~~-~~----~~~~~~~~----~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~ 151 (499)
T 2qa2_A 81 QG-HF----GGRPVDFG----VLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPR 151 (499)
T ss_dssp EE-EE----TTEEEEGG----GSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEE
T ss_pred cc-ee----cceecccc----cCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcE
Confidence 00 00 11111111 11123456789999999999988763 2458899999999999999999998875
Q ss_pred EEeccEEEEecCCchhhhhhhc-CCCCccccceEEEEEEeccCCCCccccceEEEecCeeEEEEeeCCCCeEEEEEEeeC
Q 006025 230 CYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKE 308 (664)
Q Consensus 230 ~i~adlvVgADG~~S~vR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (664)
+++||+||+|||++|.||+.+. ......+.. ..+.+..... .... .+..+..++.+++.+|.+++.+.+++....
T Consensus 152 ~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~-~~~~~~v~~~--~~~~-~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~ 227 (499)
T 2qa2_A 152 SLTTRYVVGCDGGRSTVRKAAGFDFPGTSASR-EMFLADIRGC--EITP-RPIGETVPLGMVMSAPLGDGVDRIIVCERG 227 (499)
T ss_dssp EEEEEEEEECCCTTCHHHHHTTCCCCEECCCC-CEEEEEEESC--CCCC-EEEEEEETTEEEEEEECSSSCEEEEEEETT
T ss_pred EEEeCEEEEccCcccHHHHHcCCCCCCCCCcc-EEEEEEEEEC--CCCc-ceEEEECCCeEEEEEEcCCCEEEEEEEecC
Confidence 8999999999999999999983 222333332 2333333221 1111 133445555667777887776666554322
Q ss_pred CCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhHHHH
Q 006025 309 PAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIE 388 (664)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~al~ 388 (664)
............+++.+.+..+.... +..........+... .....+|..|||+|+|||||.++|++|||+|+||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~ 303 (499)
T 2qa2_A 228 APARRRTGPPPYQEVAAAWQRLTGQD---ISHGEPVWVSAFGDP-ARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQ 303 (499)
T ss_dssp CCCCCCSSSCCHHHHHHHHHHHHSCC---CTTCEEEEEEEECCC-EEECSCSEETTEEECGGGTEEECCCSSCHHHHHHH
T ss_pred CCCccccCCCCHHHHHHHHHHHhCCC---CCccceeEEEEEeCC-cEEcccccCCCEEEEecccccCCCccccchhhhHH
Confidence 21111112223455544443221100 000000111111111 12356789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHH
Q 006025 389 DGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (664)
Q Consensus 389 Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~ 438 (664)
||.+|+|+|+.++++. ..+.+|++|+++|++++..++..++.+
T Consensus 304 DA~~La~~La~~l~g~-------~~~~~L~~Ye~eR~~~~~~~~~~s~~~ 346 (499)
T 2qa2_A 304 DSVNLGWKLAAVVSGR-------APAGLLDTYHEERHPVGRRLLMNTQAQ 346 (499)
T ss_dssp HHHHHHHHHHHHHTTS-------SCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-------CChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987642 225799999999999999988777643
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=1.1e-36 Score=335.74 Aligned_cols=331 Identities=16% Similarity=0.173 Sum_probs=217.1
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
.+.+||+||||||+||++|+.|+++|++|+||||.+.+... ..++.++++++++|+.+ |+++++... .. ...
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~----~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~-~~~ 80 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGE----SRGLGFTARTMEVFDQR--GILPRFGEV-ET-STQ 80 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCC----CCSEEECHHHHHHHHTT--TCGGGGCSC-CB-CCE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CCcceECHHHHHHHHHC--CCHHHHHhc-cc-ccc
Confidence 45689999999999999999999999999999998654322 23678999999999998 666665432 11 000
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCc---
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ--- 229 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~--- 229 (664)
. .. +.....+.. .....+..+.++|..|++.|.+.+. ...++++++|+++++++++|+|++.+++
T Consensus 81 -~-~~----~~~~~~~~~----~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~ 150 (500)
T 2qa1_A 81 -G-HF----GGLPIDFGV----LEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKH 150 (500)
T ss_dssp -E-EE----TTEEEEGGG----STTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEE
T ss_pred -c-cc----cceeccccc----CCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCE
Confidence 0 00 111111111 1112345678999999999988763 2458899999999999999999998775
Q ss_pred EEeccEEEEecCCchhhhhhhcC-CCCccccceEEEEEEeccCCCCccccceEEEecCeeEEEEeeCCCCeEEEEEEeeC
Q 006025 230 CYAGDLLIGADGIWSKVRKNLFG-PQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKE 308 (664)
Q Consensus 230 ~i~adlvVgADG~~S~vR~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (664)
+++||+||+|||.+|.||+++.. .....+.. ..+.+..... +... .+..+..++.+++.+|.+++.+.+++....
T Consensus 151 ~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~-~~~~~~~~~~--~~~~-~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~ 226 (500)
T 2qa1_A 151 TLRAAYLVGCDGGRSSVRKAAGFDFPGTAATM-EMYLADIKGV--ELQP-RMIGETLPGGMVMVGPLPGGITRIIVCERG 226 (500)
T ss_dssp EEEESEEEECCCTTCHHHHHTTCCCCEECCCC-EEEEEEEESC--CCCC-EEEEEEETTEEEEEEEETTTEEEEEEEETT
T ss_pred EEEeCEEEECCCcchHHHHHcCCCcCCCccce-EEEEEEEEeC--CCCC-ceEEEECCCcEEEEEEcCCCEEEEEEEcCC
Confidence 89999999999999999999832 22333332 3333333221 1111 133445555667777877776655544322
Q ss_pred CCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhHHHH
Q 006025 309 PAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIE 388 (664)
Q Consensus 309 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~al~ 388 (664)
............+++.+.+..+.... +..........+... .....+|..|||+|+|||||.++|++|||||+||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~-~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~ 302 (500)
T 2qa1_A 227 TPPQRRETPPSWHEVADAWKRLTGDD---IAHAEPVWVSAFGNA-TRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQ 302 (500)
T ss_dssp CCC-----CCCHHHHHHHHHHHHSCC---CTTSEEEEEEEEECC-EEECSCSEETTEEECGGGTEECCCCSSCHHHHHHH
T ss_pred CCCccccCCCCHHHHHHHHHHhcCCC---CCccceeEEEEeccC-cEEccccccCCEEEEEccccCCCCccccchhhhHH
Confidence 21111111123344444443221100 000000111111111 12356788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHH
Q 006025 389 DGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (664)
Q Consensus 389 Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~ 438 (664)
||.+|+|+|+.++++. ..+.+|++|+++|++++..++..++.+
T Consensus 303 DA~~La~~La~~~~g~-------~~~~~L~~Y~~eR~~~~~~~~~~s~~~ 345 (500)
T 2qa1_A 303 DAVNLGWKLGAVVNGT-------ATEELLDSYHSERHAVGKRLLMNTQAQ 345 (500)
T ss_dssp HHHHHHHHHHHHHTTS-------SCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-------CChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987542 236899999999999999988777643
No 8
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.7e-37 Score=330.36 Aligned_cols=341 Identities=20% Similarity=0.257 Sum_probs=234.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.+... . ...++.+.++++++|+.+ |+++++...+.... .+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~-~---~~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~~-~~ 77 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRER-A---INGADLLKPAGIRVVEAA--GLLAEVTRRGGRVR-HE 77 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC-------CCCCEECHHHHHHHHHT--TCHHHHHHTTCEEE-CE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCC-c---cCceeeECchHHHHHHHc--CcHHHHHHhCCCcc-ee
Confidence 35799999999999999999999999999999985431 1 122578999999999998 77888765443211 11
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCC---ceEEeCCeEEEEEeeCCeE--EEEEcCCcE
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD---EIILNESNVIDFKDHGDKV--SVVLENGQC 230 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~v~~~~~~v--~v~~~~g~~ 230 (664)
. +.+. .+.....++.... ....+++.++|..|.+.|.+.+.. ..++++++|++++.+++++ .|++.+|++
T Consensus 78 ~-~~~~-~g~~~~~~~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~ 152 (399)
T 2x3n_A 78 L-EVYH-DGELLRYFNYSSV---DARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRV 152 (399)
T ss_dssp E-EEEE-TTEEEEEEETTSS---CGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCE
T ss_pred E-EEeC-CCCEEEecchHHh---cccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCE
Confidence 1 1111 1222222222110 011345789999999999998754 3588899999999988888 899999999
Q ss_pred EeccEEEEecCCchhhhhhhcCCCCcc--ccce--EEEEEEeccCCCCccccceEEEecC-eeEEEEeeCCCCeEEEEEE
Q 006025 231 YAGDLLIGADGIWSKVRKNLFGPQEAI--YSGY--TCYTGIADFVPADIESVGYRVFLGH-KQYFVSSDVGAGKMQWYAF 305 (664)
Q Consensus 231 i~adlvVgADG~~S~vR~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 305 (664)
++||+||+|||.+|.+|+.+....... +.+. .++.+..... .+.. . .++.+ +.+++.+|.+++.+.|+..
T Consensus 153 ~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~---~~~~-~-~~~~~~~~~~~~~p~~~~~~~~~~~ 227 (399)
T 2x3n_A 153 LRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV---AERN-R-LYVDSQGGLAYFYPIGFDRARLVVS 227 (399)
T ss_dssp EEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH---HHCE-E-EEECTTSCEEEEEEETTTEEEEEEE
T ss_pred EECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCC---CCCc-c-EEEcCCCcEEEEEEcCCCEEEEEEE
Confidence 999999999999999999884333333 4444 5555433221 1111 2 44455 6677777877778888764
Q ss_pred eeCCCCCCCCCcchHHHHHHHHhCCChhHH-HHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchh
Q 006025 306 HKEPAGGVDGPEGKKERLLKIFEGWCDNVV-DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (664)
Q Consensus 306 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n 384 (664)
...............+.+.+.+..|.+.+. ..+..........+++.......+|..+||+|+|||||.++|++|||+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~ 307 (399)
T 2x3n_A 228 FPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMN 307 (399)
T ss_dssp CCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHH
T ss_pred eCccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHH
Confidence 321100000000123567777778876652 3333333112334445443445679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHHH
Q 006025 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 439 (664)
Q Consensus 385 ~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~ 439 (664)
+||+||..|+++|...++.+ .+...+|+.|+++|++++..++..++...
T Consensus 308 ~al~da~~La~~L~~~~~~~------~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~ 356 (399)
T 2x3n_A 308 LAIEDASALADALDLALRDA------CALEDALAGYQAERFPVNQAIVSYGHALA 356 (399)
T ss_dssp HHHHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccc------chHHHHHHHHHHHhccHHHHHHHHHHHhh
Confidence 99999999999999876531 23578999999999999998888776543
No 9
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=1.5e-35 Score=319.66 Aligned_cols=335 Identities=30% Similarity=0.441 Sum_probs=229.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCe-EEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~-~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
..+||+||||||+|+++|+.|+++|++ |+|+||.+.+. .. ..++.+.++++++|+.+ |+++.+...+.... .
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~-~~---g~g~~l~~~~~~~l~~l--g~~~~l~~~~~~~~-~ 75 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR-PL---GVGINIQPAAVEALAEL--GLGPALAATAIPTH-E 75 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC-CC---SCEEEECHHHHHHHHHT--TCHHHHHHHSEEEC-E
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc-cc---eeEEEEChHHHHHHHHC--CChHHHHhhCCCcc-e
Confidence 357999999999999999999999999 99999976432 12 23678999999999999 77888876543221 1
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc----CCceEEeCCeEEEEEeeCCeEEEEEcC---
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV----GDEIILNESNVIDFKDHGDKVSVVLEN--- 227 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~----~~~~i~~~~~v~~v~~~~~~v~v~~~~--- 227 (664)
+. +.+. .+......... .......+ .+.++|..|++.|.+.+ +...++++++|++++. +++++|++.+
T Consensus 76 ~~-~~~~-~g~~~~~~~~~-~~~~~~~~-~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~ 150 (410)
T 3c96_A 76 LR-YIDQ-SGATVWSEPRG-VEAGNAYP-QYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGH 150 (410)
T ss_dssp EE-EECT-TSCEEEEEECG-GGGTCSSC-EEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETT
T ss_pred EE-EEcC-CCCEEeeccCC-ccccCCCC-eeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCC
Confidence 11 1221 12222211110 00111222 46899999999998875 3335889999999998 7778888876
Q ss_pred C--cEEeccEEEEecCCchhhhhhhcCC-CCccccceEEEEEEeccCCCCccccceEEEec--CeeEEEEeeCCC-----
Q 006025 228 G--QCYAGDLLIGADGIWSKVRKNLFGP-QEAIYSGYTCYTGIADFVPADIESVGYRVFLG--HKQYFVSSDVGA----- 297 (664)
Q Consensus 228 g--~~i~adlvVgADG~~S~vR~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----- 297 (664)
| ++++||+||+|||.+|.||+.+.+. ....|.+...+.++....+.. ... ...+.+ .+..++.+|..+
T Consensus 151 g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~p~~~~~~~~ 228 (410)
T 3c96_A 151 GKPQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFL-DGK-TMIVANDEHWSRLVAYPISARHAAE 228 (410)
T ss_dssp SCEEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCT-TSS-EEEEEECTTCCEEEEEECCHHHHTT
T ss_pred CCceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccccc-CCC-eEEEecCCCCcEEEEEecCCcccCC
Confidence 7 5799999999999999999998533 335566666666554332211 111 222333 244556666542
Q ss_pred --CeEEEEEEeeCC------CCCCCCCcchHHHHHHHHhCCCh---hHHHHHHcCCccceeeeecccCCCCccccCCcEE
Q 006025 298 --GKMQWYAFHKEP------AGGVDGPEGKKERLLKIFEGWCD---NVVDLILATDEEAILRRDIYDRTPIFTWGRGRVT 366 (664)
Q Consensus 298 --~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~ 366 (664)
..+.|+...... ...........+++.+.+..|.. .+.+.+.... .+..+++....+..+|..+||+
T Consensus 229 g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~grv~ 306 (410)
T 3c96_A 229 GKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVDRDPLPHWGRGRIT 306 (410)
T ss_dssp TCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEECCCCSCCCBTTEE
T ss_pred CCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCc--ccceeecccCCCccccccCCEE
Confidence 345676654321 11111122345778888888754 2445554443 2344555555566789999999
Q ss_pred EEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHH
Q 006025 367 LLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (664)
Q Consensus 367 LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~ 436 (664)
|||||||.++|++|||+|+||+||.+|+++|... .+...+|+.|+++|++++..++..++
T Consensus 307 LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~----------~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 307 LLGDAAHLMYPMGANGASQAILDGIELAAALARN----------ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp ECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC----------SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccCCCCCccchhHHHHHHHHHHHHHHHhcc----------CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999862 13578999999999999998887765
No 10
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=2.4e-35 Score=334.99 Aligned_cols=335 Identities=17% Similarity=0.193 Sum_probs=213.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHH-----cCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKR-----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~-----~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~ 151 (664)
.+||+||||||+||++|+.|++ .|++|+||||.+.+.. ...++.++++++++|+.+ |+++++...+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~----~gra~~l~~~tle~l~~l--Gl~~~l~~~~~~~ 81 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVY----NGQADGLQCRTLESLKNL--GLADKILSEANDM 81 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCC----SCSCCEECHHHHHHHHTT--TCHHHHHTTCBCC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCC----CCceeEEChHHHHHHHHC--CCHHHHHHhcccc
Confidence 5799999999999999999999 9999999999864332 223678999999999999 7888887655432
Q ss_pred CccccccccCC-CCceee--eccCCCcccccCCCeEEeeCHHHHHHHHHHhcC-----CceEEeCCeEEEEEeeC-----
Q 006025 152 GDRINGLVDGI-SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG-----DEIILNESNVIDFKDHG----- 218 (664)
Q Consensus 152 ~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~-----~~~i~~~~~v~~v~~~~----- 218 (664)
. .+. +++.. .+.... .+... .........+.++|..|++.|.+.+. ...++++++|++++.++
T Consensus 82 ~-~~~-~~~~~~~g~i~~~~~~~~~--~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~ 157 (665)
T 1pn0_A 82 S-TIA-LYNPDENGHIRRTDRIPDT--LPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAED 157 (665)
T ss_dssp C-EEE-EEEECTTSCEEEEEEEESS--CTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTC
T ss_pred c-eEE-EEeCCCCcceEeecccCcc--cCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCccccc
Confidence 1 221 22211 121110 11110 00111222467999999999988763 23588999999998765
Q ss_pred ---CeEEEEEc------------------------------------------CC--cEEeccEEEEecCCchhhhhhhc
Q 006025 219 ---DKVSVVLE------------------------------------------NG--QCYAGDLLIGADGIWSKVRKNLF 251 (664)
Q Consensus 219 ---~~v~v~~~------------------------------------------~g--~~i~adlvVgADG~~S~vR~~l~ 251 (664)
++|++++. +| ++++|||||||||++|.||+++.
T Consensus 158 ~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg 237 (665)
T 1pn0_A 158 PEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLG 237 (665)
T ss_dssp TTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred CCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcC
Confidence 46877664 35 57999999999999999999984
Q ss_pred CC-CCccccceEEEEEEeccCC-CCccc--cceEEEecCeeEEEEeeCCCCeEEEEEEeeCCCC---CCCCCcchHHHHH
Q 006025 252 GP-QEAIYSGYTCYTGIADFVP-ADIES--VGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAG---GVDGPEGKKERLL 324 (664)
Q Consensus 252 ~~-~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~ 324 (664)
.. ....+.. .| ++.+..+ .+.+. ....++..+...++.+|..++.+.|++....... .........+.+.
T Consensus 238 ~~~~g~~~~~--~~-~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~ 314 (665)
T 1pn0_A 238 FEMIGEQTDY--IW-GVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVI 314 (665)
T ss_dssp CCCEEEEEEE--EE-EEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHH
T ss_pred CCCCCCCccE--EE-EEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHH
Confidence 32 2223322 11 2222111 11111 1122233244556667777776666655433210 0011112234443
Q ss_pred HHHhCCChhHHHHHHc--CCccceeeeeccc--CCCCcccc-CCcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHH
Q 006025 325 KIFEGWCDNVVDLILA--TDEEAILRRDIYD--RTPIFTWG-RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEK 399 (664)
Q Consensus 325 ~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~--~~~~~~~~-~~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~ 399 (664)
+.+.. .+.. .....+..+..+. .....+|. .+||+|+|||||.++|++|||||+||+||.+|+|+|+.
T Consensus 315 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~ 387 (665)
T 1pn0_A 315 ANAKK-------IFHPYTFDVQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGL 387 (665)
T ss_dssp HHHHH-------HHTTSCCEEEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-------HhCcccCceeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHH
Confidence 33221 1110 0011122223332 12346788 79999999999999999999999999999999999999
Q ss_pred HhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHH
Q 006025 400 ACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (664)
Q Consensus 400 ~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~ 438 (664)
++++. ..+.+|+.|+++|++++..++.+++.+
T Consensus 388 vl~g~-------a~~~lL~tYe~eR~p~a~~~i~~s~~~ 419 (665)
T 1pn0_A 388 VLTGR-------AKRDILKTYEEERQPFAQALIDFDHQF 419 (665)
T ss_dssp HHTTC-------BCGGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCC-------CcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88642 225789999999999999888776643
No 11
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=3.4e-36 Score=321.32 Aligned_cols=323 Identities=24% Similarity=0.302 Sum_probs=221.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.+.. . ..++.+.++++++|+.+ |+++++...+... ..+
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~-~---~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~-~~~ 82 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA-F---GAGIYLWHNGLRVLEGL--GALDDVLQGSHTP-PTY 82 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC-C---SSEEEEEHHHHHHHHHT--TCHHHHHTTCBCC-SCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC-C---CceEEeCccHHHHHHHc--CCHHHHHhhCCCc-cce
Confidence 468999999999999999999999999999999765422 1 23678999999999999 7888876654322 112
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEec
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~a 233 (664)
. +.+. +.....++.. +.+ .+.++|..|.+.|.+.+. ...++++++|++++. + + +|++.+|++++|
T Consensus 83 ~-~~~~--g~~~~~~~~~------~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~-~v~~~~g~~~~a 149 (379)
T 3alj_A 83 E-TWMH--NKSVSKETFN------GLP-WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V-G-RLTLQTGEVLEA 149 (379)
T ss_dssp E-EEET--TEEEEEECGG------GCC-EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T-EEEETTSCEEEC
T ss_pred E-EEeC--CceeeeccCC------CCc-eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C-EEEECCCCEEEc
Confidence 1 2222 3222222210 233 478999999999988763 235889999999987 3 4 788889999999
Q ss_pred cEEEEecCCchhhhhhhcCCCCccccceEEEEEEeccC----CCCccccceEE--EecCeeEEEEeeCCCCeEEEEEEee
Q 006025 234 DLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADFV----PADIESVGYRV--FLGHKQYFVSSDVGAGKMQWYAFHK 307 (664)
Q Consensus 234 dlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (664)
|+||+|||.+|.+|+.+.......|.++.++.+..... +.......... +++++.+++.+|.+++...|++...
T Consensus 150 d~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 229 (379)
T 3alj_A 150 DLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAP 229 (379)
T ss_dssp SEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEEC
T ss_pred CEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEec
Confidence 99999999999999998654444565656666655432 21111112222 4466677788899888888876554
Q ss_pred CCCCCCCCCcchHHHHHHHHhCCChhHH---HHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchh
Q 006025 308 EPAGGVDGPEGKKERLLKIFEGWCDNVV---DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (664)
Q Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n 384 (664)
... .. + +.+.+.|..|.+.+. +.+.......+..+.++...+..+|..+||+|||||||.++|++|||+|
T Consensus 230 ~~~--~~-~----~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~ 302 (379)
T 3alj_A 230 AAD--PR-G----SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAG 302 (379)
T ss_dssp TTC--TT-T----TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHH
T ss_pred CCC--CC-H----HHHHHHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHH
Confidence 311 10 1 112222222222111 3332221122333444443345688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhH
Q 006025 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 435 (664)
Q Consensus 385 ~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s 435 (664)
+||+||..|+++|... .+...+|+.|+++|++++..++..+
T Consensus 303 ~ai~da~~La~~L~~~----------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 303 CAMVNAFSLSQDLEEG----------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHHHHHHHHTTSS----------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc----------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998641 1347899999999999999887766
No 12
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.9e-34 Score=321.76 Aligned_cols=336 Identities=17% Similarity=0.164 Sum_probs=213.6
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
+..+||+||||||+|+++|+.|+++|++|+|+||.+.... ...+..++++++++|+.+ |+.+++...+......
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~----~~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~ 97 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT----HPRVGTIGPRSMELFRRW--GVAKQIRTAGWPGDHP 97 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS----SCCCCEECHHHHHHHHHT--TCHHHHHTSSCCTTSB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC----CCceeeeCHHHHHHHHHc--CChHHHHhhcCCcccc
Confidence 4468999999999999999999999999999999864321 223577999999999999 7888887665432211
Q ss_pred c-cccccCCCCceeeeccCCCccc--c--cCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcC--
Q 006025 155 I-NGLVDGISGSWYIKFDTFTPAA--E--KGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN-- 227 (664)
Q Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~-- 227 (664)
. ..+.....+.....++...... . ......+.+.|..|++.|.+.+... ++++++|+++++++++|++++.+
T Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~ 176 (549)
T 2r0c_A 98 LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLR 176 (549)
T ss_dssp CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETT
T ss_pred cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECC
Confidence 0 0011112222222222111000 0 0111246899999999999987666 88999999999999999988876
Q ss_pred -C--cEEeccEEEEecCCchhhhhhhc-CCCCccccceEEEEEEeccCCC----CccccceEEEecCe-eEEEEeeCCCC
Q 006025 228 -G--QCYAGDLLIGADGIWSKVRKNLF-GPQEAIYSGYTCYTGIADFVPA----DIESVGYRVFLGHK-QYFVSSDVGAG 298 (664)
Q Consensus 228 -g--~~i~adlvVgADG~~S~vR~~l~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~ 298 (664)
| ++++||+||+|||.+|.||+.+. ......+.+. .+......... ......+..+..++ ..++..+..+.
T Consensus 177 ~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~ 255 (549)
T 2r0c_A 177 TGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQV-FRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGR 255 (549)
T ss_dssp TCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEE-EEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSS
T ss_pred CCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccce-EEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCC
Confidence 6 47999999999999999999983 3333344332 22222221100 00111223333333 44555566443
Q ss_pred -eEEEEEEeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCC
Q 006025 299 -KMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQP 377 (664)
Q Consensus 299 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P 377 (664)
.+.|.. ..+... .......+.+.+.+.. . + .........+.+.. ....+|..|||+|+|||||.++|
T Consensus 256 ~~~~~~~--~~~~~~-~~~~~~~~~l~~~~~~-~--~-----~~~~~~~~~~~~~~-~~a~~~~~grv~L~GDAAH~~~P 323 (549)
T 2r0c_A 256 GLYRLTV--GVDDAS-KSTMDSFELVRRAVAF-D--T-----EIEVLSDSEWHLTH-RVADSFSAGRVFLTGDAAHTLSP 323 (549)
T ss_dssp SEEEEEE--ECSTTC-CSCCCHHHHHHHHBCS-C--C-----CCEEEEEEEEEECC-EECSCSEETTEEECGGGTEECCC
T ss_pred cEEEEEe--cCCCCC-CCHHHHHHHHHHHhCC-C--C-----ceeEEEEecchhHh-hhHHhhcCCcEEEEccccccCCC
Confidence 333332 222111 1122223333333321 0 0 00111112222222 34567889999999999999999
Q ss_pred CCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHH
Q 006025 378 NLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (664)
Q Consensus 378 ~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~ 437 (664)
++|||||+||+||.+|+|+|+.++++. ..+.+|++|+++|++++..+++++..
T Consensus 324 ~~GqG~n~gi~DA~~La~~La~~l~g~-------a~~~lL~~Y~~eR~~~a~~~~~~s~~ 376 (549)
T 2r0c_A 324 SGGFGMNTGIGSAADLGWKLAATLRGW-------AGPGLLATYEEERRPVAITSLEEANV 376 (549)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHTC-------SCTTTTHHHHHHHHHHHHHHHHC---
T ss_pred ccCCccccccHHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987642 12468999999999999998887764
No 13
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=1.2e-34 Score=323.28 Aligned_cols=340 Identities=22% Similarity=0.281 Sum_probs=214.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+||++|+.|+++|++|+||||.+..... ..+..++++++++|+.+ |+++++...+.......
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~----~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~~ 77 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPY----PRAAGQNPRTMELLRIG--GVADEVVRADDIRGTQG 77 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCC----CCSCCBCHHHHHHHHHT--TCHHHHHHSCCSSCTTS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC----CccceECHHHHHHHHHc--CCHHHHHhhCCCccccc
Confidence 4589999999999999999999999999999998654322 22567999999999999 78888887665322210
Q ss_pred cc---cccCCCCceee----eccCCCcccccCCCe-EEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCC----eE
Q 006025 156 NG---LVDGISGSWYI----KFDTFTPAAEKGLPV-TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD----KV 221 (664)
Q Consensus 156 ~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~----~v 221 (664)
.. ......+.... .++..........+. .+.++|..|++.|.+.+. ...++++++|++++.+++ +|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v 157 (535)
T 3ihg_A 78 DFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV 157 (535)
T ss_dssp CCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE
T ss_pred ceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE
Confidence 00 11111222222 111000000000121 467899999999988763 246889999999999988 99
Q ss_pred EEEEcCC---cEEeccEEEEecCCchhhhhhh-cCCCCccccceEEEEEEeccCCCCc-cc-cceEEEecCeeEEEEeeC
Q 006025 222 SVVLENG---QCYAGDLLIGADGIWSKVRKNL-FGPQEAIYSGYTCYTGIADFVPADI-ES-VGYRVFLGHKQYFVSSDV 295 (664)
Q Consensus 222 ~v~~~~g---~~i~adlvVgADG~~S~vR~~l-~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 295 (664)
++++.++ .+++||+||+|||.+|.||+++ +......+.+......+....+... .. ..+..+..++...+..+.
T Consensus 158 ~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~ 237 (535)
T 3ihg_A 158 TARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPEFKGTFGPT 237 (535)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEECCCceEEEEEe
Confidence 9998887 7899999999999999999998 3333333332221111111111111 11 122333344444455555
Q ss_pred CC-CeEEEEEEeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHc----CCccceeeeecccCCCCccccCCcEEEEcc
Q 006025 296 GA-GKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILA----TDEEAILRRDIYDRTPIFTWGRGRVTLLGD 370 (664)
Q Consensus 296 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~rv~LvGD 370 (664)
.+ ..+.+.+... +...........+.+.+.+.. .+.. ........|.+.. ....+|..|||+|+||
T Consensus 238 ~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~grv~LvGD 308 (535)
T 3ihg_A 238 DRPDRHTLFVEYD-PDEGERPEDFTPQRCVELIGL-------ALDAPEVKPELVDIQGWEMAA-RIAERWREGRVFLAGD 308 (535)
T ss_dssp SSTTEEEEEEEEC-TTTTCCGGGCCHHHHHHHHHH-------HHTCSSCCCEEEEEEEEEEEE-EEESCSEETTEEECTT
T ss_pred cCCCEEEEEEeeC-ccccCccccCCHHHHHHHHHH-------HhCCCCCceeEEEeeEeeeeE-EEECccccCCEEEEec
Confidence 54 3333333222 211111112222333332221 1110 0011112222222 2346789999999999
Q ss_pred CcCcCCCCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHH
Q 006025 371 SVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (664)
Q Consensus 371 AAh~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~ 437 (664)
|||.++|++|||+|+||+||.+|+|+|+.++++. ....+|++|+++|++++..+++.+..
T Consensus 309 AAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~-------~~~~lL~~Ye~eR~p~a~~~~~~s~~ 368 (535)
T 3ihg_A 309 AAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQ-------AGAGLLDTYEDERKVAAELVVAEALA 368 (535)
T ss_dssp TTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTS-------SCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCccCCccccccccHHHHHHHHHHHhcCC-------CcHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987642 22578999999999999999887754
No 14
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=9.9e-35 Score=311.69 Aligned_cols=373 Identities=14% Similarity=0.150 Sum_probs=224.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCcc--ccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA--IRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~--~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
++||+||||||+|+++|+.|+++|++|+|+|+.+.+ ....+ ...+.++++++|+.+ |+++++...+.... .
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~----~g~l~~~~~~~l~~l--g~~~~~~~~~~~~~-~ 74 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIR----AGVLEQGMVDLLREA--GVDRRMARDGLVHE-G 74 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCC----CCEECHHHHHHHHHT--TCCHHHHHHCEEES-C
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCc----eEeECHHHHHHHHHc--CCcHHHHhcCCccc-e
Confidence 479999999999999999999999999999998643 11121 224899999999999 67777766543221 1
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeC-CeEEEEE-cCCc-
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVSVVL-ENGQ- 229 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~-~~v~v~~-~~g~- 229 (664)
+. +.+. +. ...++. ....+....+.+.+..+.+.|.+.+. ...++++++|++++.++ +.+.|++ .+|+
T Consensus 75 ~~-~~~~--~~-~~~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~ 147 (394)
T 1k0i_A 75 VE-IAFA--GQ-RRRIDL---KRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGER 147 (394)
T ss_dssp EE-EEET--TE-EEEECH---HHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEE
T ss_pred EE-EEEC--Cc-eEEecc---ccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcE
Confidence 11 1111 11 111111 00011223567889999888877652 34588999999998764 5688888 7887
Q ss_pred -EEeccEEEEecCCchhhhhhhcCCCCccccce--EEEEEEeccCCCCccccceEEEecCeeEEEEeeCCCCeEEEEEEe
Q 006025 230 -CYAGDLLIGADGIWSKVRKNLFGPQEAIYSGY--TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFH 306 (664)
Q Consensus 230 -~i~adlvVgADG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (664)
+++||+||+|||.+|.+|+.+.......|... ..+.++....+.... ...+...++.+++.++..++...|++..
T Consensus 148 ~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 225 (394)
T 1k0i_A 148 LRLDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSH--ELIYANHPRGFALCSQRSATRSQYYVQV 225 (394)
T ss_dssp EEEECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCS--SCEEECCTTCCEEEEEEETTEEEEEEEE
T ss_pred EEEEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCcc--ceEEEEcCCceEEEEecCCCcEEEEEEe
Confidence 79999999999999999999843323334332 234443322222111 1222223344444444445556666544
Q ss_pred eCCCCCCCCCcchHHHHHHHHh-CCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhH
Q 006025 307 KEPAGGVDGPEGKKERLLKIFE-GWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCM 385 (664)
Q Consensus 307 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~ 385 (664)
..... . .....+.+.+.+. .+.......+...........++.. ....+|..+||+|+|||||.++|++|||+|+
T Consensus 226 ~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ 301 (394)
T 1k0i_A 226 PLSEK-V--EDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRS-FVVEPMQHGRLFLAGDAAHIVPPTGAKGLNL 301 (394)
T ss_dssp CTTCC-G--GGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEEE-EEEECSEETTEEECGGGTEECCGGGTCHHHH
T ss_pred CCCCC-c--cccCHHHHHHHHHHhhCcccccccccCcceeeEEEEhhh-hhccccccCCEEEEechhhcCCCcccchHHH
Confidence 32211 0 1111222222222 2222221111111110001111111 1234678899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHHHHHHHHhhhhhccCCCcccceeeeccc
Q 006025 386 AIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIP 465 (664)
Q Consensus 386 al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~ 465 (664)
||+||..|+++|...++.+ ...+|+.|+++|++++..++.+++....+.. .+.....+.+.+|+..+.
T Consensus 302 ai~da~~La~~L~~~~~~~--------~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~----~~~~~~~~~~~~r~~~l~ 369 (394)
T 1k0i_A 302 AASDVSTLYRLLLKAYREG--------RGELLERYSAICLRRIWKAERFSWWMTSVLH----RFPDTDAFSQRIQQTELE 369 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHC--------CGGGGGGHHHHHHHHHHHHHHHHHHHHHHHS----CCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccC--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCCChHHHHHHHHHHH
Confidence 9999999999999876432 1468999999999999988877764333221 222233345566666654
Q ss_pred CCCccc--ceeeeehhhh
Q 006025 466 HPGRVG--GRFFIDLAMP 481 (664)
Q Consensus 466 ~~~~~~--~~~l~~~~~g 481 (664)
.+...+ ++.+++.++|
T Consensus 370 ~~~~~~~~~~~~~~~~~g 387 (394)
T 1k0i_A 370 YYLGSEAGLATIAENYVG 387 (394)
T ss_dssp HHHHCHHHHHHHHHHHSC
T ss_pred hhcCCHHHHHHHHHHhcC
Confidence 443332 3555555443
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=6.6e-33 Score=314.52 Aligned_cols=335 Identities=16% Similarity=0.231 Sum_probs=208.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH-cCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
..+||+||||||+||++|+.|++ +|++|+||||.+.+.. ...++.++++++++|+.+ |+.+++...+.... .
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~----~g~a~~l~~~t~e~l~~l--Gl~~~~~~~~~~~~-~ 103 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME----LGQADGIACRTMEMFEAF--EFADSILKEACWIN-D 103 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS----SCSCCEECHHHHHHHHHT--TCHHHHHHHSEEEC-E
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC----CCceeeeCHHHHHHHHHc--CcHHHHHHhccccc-c
Confidence 46899999999999999999999 9999999999864432 223578999999999999 78888876553221 1
Q ss_pred ccccccCC---CCceee--eccCCCcccccCCCeEEeeCHHHHHHHHHHhc---C-CceEEeCCeEEEEEeeCC----eE
Q 006025 155 INGLVDGI---SGSWYI--KFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---G-DEIILNESNVIDFKDHGD----KV 221 (664)
Q Consensus 155 ~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~-~~~i~~~~~v~~v~~~~~----~v 221 (664)
+. ++... .+.... .+... ......+..+.++|..|++.|.+.+ + ...++++++|++++.+++ +|
T Consensus 104 ~~-~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v 180 (639)
T 2dkh_A 104 VT-FWKPDPGQPGRIARHGRVQDT--EDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV 180 (639)
T ss_dssp EE-EEEECTTSTTCEEEEEEEESS--CTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE
T ss_pred eE-EECCCCCCCcceEeecccCcc--cCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE
Confidence 11 12110 111110 11100 0011122346899999999998875 3 225788999999998763 58
Q ss_pred EEEEc------CC--cEEeccEEEEecCCchhhhhhhcCC-CCccccceEEEEEEec--cCCCCccccceEEEecCeeEE
Q 006025 222 SVVLE------NG--QCYAGDLLIGADGIWSKVRKNLFGP-QEAIYSGYTCYTGIAD--FVPADIESVGYRVFLGHKQYF 290 (664)
Q Consensus 222 ~v~~~------~g--~~i~adlvVgADG~~S~vR~~l~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 290 (664)
+|++. +| ++++||+||+|||++|.||+.+... ....+.....+..+.. ..+ +.. ....+.. +..++
T Consensus 181 ~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p-~~~-~~~~~~~-~~g~~ 257 (639)
T 2dkh_A 181 TVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFP-DVR-YKVAIQS-EQGNV 257 (639)
T ss_dssp EEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCT-TTT-SEEEEEE-TTEEE
T ss_pred EEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCC-ccc-eeEEEEc-CCceE
Confidence 88775 46 5799999999999999999998422 2222322212211110 111 111 1112222 44556
Q ss_pred EEeeCCCC-eEEEEEEeeC--CCCCCCCCcchHHHHHHHHhCCChhHHHHHHc--CCccceeeeecccC--CCCcccc--
Q 006025 291 VSSDVGAG-KMQWYAFHKE--PAGGVDGPEGKKERLLKIFEGWCDNVVDLILA--TDEEAILRRDIYDR--TPIFTWG-- 361 (664)
Q Consensus 291 ~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~--~~~~~~~-- 361 (664)
+.+|..++ .+.|++.... ............+.+.+.+. +.+.. .....+..+..+.. ....+|.
T Consensus 258 ~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 330 (639)
T 2dkh_A 258 LIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQ-------RVLHPYKLEVKNVPWWSVYEIGQRICAKYDDV 330 (639)
T ss_dssp EEEECTTSSCEEEEEECC-----------CCCHHHHHHHHH-------HHHTTSCEEEEEEEEEEEECCCCEECSCSBSC
T ss_pred EEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHH-------HHhCcccCcceeeeEEEecccccchhhhhhcc
Confidence 66777766 5555554332 11000111122334433321 11111 00011222223321 2234666
Q ss_pred ----------CCcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHH
Q 006025 362 ----------RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVI 431 (664)
Q Consensus 362 ----------~~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~ 431 (664)
.|||+|+|||||.++|++|||||+||+||.+|+|+|+.++++. ..+.+|++|+++|++++..+
T Consensus 331 ~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~-------a~~~lL~~Ye~eR~~~a~~~ 403 (639)
T 2dkh_A 331 VDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQ-------CAPELLHTYSSERQVVAQQL 403 (639)
T ss_dssp CCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTS-------BCGGGGHHHHHHHHHHHHHH
T ss_pred ccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCC-------CcHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999988642 22578999999999999988
Q ss_pred HHhHHH
Q 006025 432 HGLARS 437 (664)
Q Consensus 432 ~~~s~~ 437 (664)
+.+++.
T Consensus 404 ~~~s~~ 409 (639)
T 2dkh_A 404 IDFDRE 409 (639)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876653
No 16
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=2.4e-31 Score=294.75 Aligned_cols=342 Identities=14% Similarity=0.159 Sum_probs=219.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHH-HHHhcChhHHHHHHHhccccCcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.+.... +..+.+.... +++.+ |+++.+...+......
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~l--gl~~~~~~~~~~~~~~ 78 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQI-----GESLLPATVHGICAML--GLTDEMKRAGFPIKRG 78 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCHHHHTTHHHHT--TCHHHHHTTTCCEECE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCC-----CcccCcchHHHHHHHh--CcHHHHHHcCCccccC
Confidence 45899999999999999999999999999999986443222 3446666554 78888 7778776554322211
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeE---EEEEcCCc
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKV---SVVLENGQ 229 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v---~v~~~~g~ 229 (664)
....+......+...+... .....+..+.++|..|.+.|.+.+. ...++++++|++++.+++.+ ++...+|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~ 155 (512)
T 3e1t_A 79 GTFRWGKEPEPWTFGFTRH---PDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGV 155 (512)
T ss_dssp EEEECSSCSSCEEEESSSS---SSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSC
T ss_pred ceEEecCCccccccccccC---CCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCC
Confidence 1101111111222222211 1122345688999999999988762 34588999999999988864 45555674
Q ss_pred --EEeccEEEEecCCchhhhhhhcCCCCccccceEEEEEEecc---CCCCccccceEEEecCeeEEEEeeCCCCeEEEEE
Q 006025 230 --CYAGDLLIGADGIWSKVRKNLFGPQEAIYSGYTCYTGIADF---VPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYA 304 (664)
Q Consensus 230 --~i~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (664)
+++||+||+|||.+|.+|+++.......+....++.++... .+.+.....+..+. ++.+++.+|..++...+.+
T Consensus 156 ~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~~Pl~~~~~~vg~ 234 (512)
T 3e1t_A 156 ELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAF-QDGWFWYIPLSDTLTSVGA 234 (512)
T ss_dssp EEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEE-TTEEEEEEECSSSEEEEEE
T ss_pred EEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEe-CCceEEEEEeCCCeEEEEE
Confidence 89999999999999999999832222222233455554432 12222222233344 4456777788887666555
Q ss_pred EeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccc---eeeeeccc--CCCCccccCCcEEEEccCcCcCCCCC
Q 006025 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEA---ILRRDIYD--RTPIFTWGRGRVTLLGDSVHAMQPNL 379 (664)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~--~~~~~~~~~~rv~LvGDAAh~~~P~~ 379 (664)
......... .....++.+..+..+.+.+.+.+....... +....+.. .....+|..+|++|||||||+++|+.
T Consensus 235 ~~~~~~~~~--~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~ 312 (512)
T 3e1t_A 235 VVSREAAEA--IKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVF 312 (512)
T ss_dssp EEEHHHHTT--TSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTT
T ss_pred EecHHHhhh--hcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCcc
Confidence 443211110 111233444444457777776665432110 00000000 01234677899999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHH
Q 006025 380 GQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (664)
Q Consensus 380 GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~ 436 (664)
|||+|+|++||..|++.|...+++ +.+...+|+.|+++|+++...+.++..
T Consensus 313 GqG~~~Al~dA~~La~~L~~~l~~------~~~~~~aL~~Ye~~~~~~~~~~~~~~~ 363 (512)
T 3e1t_A 313 SSGVHLATYSALLVARAINTCLAG------EMSEQRCFEEFERRYRREYGNFYQFLV 363 (512)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTT------CSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988654 234578999999999999987776654
No 17
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=2.5e-31 Score=297.10 Aligned_cols=346 Identities=14% Similarity=0.188 Sum_probs=224.0
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCc
Q 006025 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (664)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~ 153 (664)
++..+||+||||||+|+++|+.|+++|++|+|+|+.+.+.... +..+.+.+..+|+.+ |+++.+...+.....
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~-----G~~l~p~~~~~l~~l--Gl~~~l~~~~~~~~~ 92 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRV-----GESLLPGTMSILNRL--GLQEKIDAQNYVKKP 92 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCC-----CCBCCHHHHHHHHHT--TCHHHHHHHCCEEEC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCce-----eeeECHHHHHHHHHc--CCcHHHHhcCCcccC
Confidence 3457899999999999999999999999999999986443322 456889999999999 788887766543222
Q ss_pred cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc--CCceEEeCCeEEEEEee-CCeEEEEEc-CC-
Q 006025 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDH-GDKVSVVLE-NG- 228 (664)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~v~~~-~~~v~v~~~-~g- 228 (664)
.....+......+...+.... ......+..+.++|..|.+.|.+.+ ....++++++|++++.+ ++.+.|++. +|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~ 171 (591)
T 3i3l_A 93 SATFLWGQDQAPWTFSFAAPK-VAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGE 171 (591)
T ss_dssp EEEEECSSSCCCEEEECCCC---CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTE
T ss_pred CcEEEecCCCccceeeccccc-ccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCc
Confidence 211111111111122222111 1112345678999999999998875 23458889999999875 556778887 67
Q ss_pred -cEEeccEEEEecCCchhhhhhhcCCCC-ccccceEEEEEEecc---CCCCccccceEEEecCeeEEEEeeCCCCeEEEE
Q 006025 229 -QCYAGDLLIGADGIWSKVRKNLFGPQE-AIYSGYTCYTGIADF---VPADIESVGYRVFLGHKQYFVSSDVGAGKMQWY 303 (664)
Q Consensus 229 -~~i~adlvVgADG~~S~vR~~l~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (664)
.+++||+||+|||.+|.+|+.+..... ..|.+. ++...... .+.+.....+..+ .+.++++.+|..++.+.+.
T Consensus 172 ~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~-av~~~~~~~~~~~~~~~~~~~~~~-~~~G~~w~iPl~~~~~sv~ 249 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNF-AVWSYFKLKDPFEGDLKGTTYSIT-FEDGWVWMIPIKDDLYSVG 249 (591)
T ss_dssp EEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEE-EEEEEEECCCSCCSTTTTCEEEEE-ETTEEEEEEECSSSEEEEE
T ss_pred eEEEEcCEEEECCCCcchhHHHcCCCCCCccccce-EEEEEEecCccccCCCCCceEEEE-cCCcEEEEEECCCCeEEEE
Confidence 589999999999999999998843221 223332 22222211 1122222223333 3455677778777766555
Q ss_pred EEeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccc-eeeeecccCCCCccccCCcEEEEccCcCcCCCCCccc
Q 006025 304 AFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEA-ILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQG 382 (664)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG 382 (664)
+........ .......+.+.+.+..+.+.+.+.+....... ........ .....|..+|++|||||||+++|+.|||
T Consensus 250 ~~~~~~~~~-~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~rvvLIGDAAh~~~Pl~GqG 327 (591)
T 3i3l_A 250 LVVDRSKSA-EVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWS-YDTEVFSADRFFLCGDAACFTDPLFSQG 327 (591)
T ss_dssp EEEEGGGHH-HHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEE-EEESCSEETTEEECGGGTCBCCGGGCCH
T ss_pred EEcCHHHHh-hhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEecccc-cchhhcccCCEEEEccccccCCCccccc
Confidence 443321100 00011234455555566676666554322110 11111111 1234678899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHH
Q 006025 383 GCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (664)
Q Consensus 383 ~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~ 437 (664)
+|+|++||..|++.|...+.. ......+++.|++.|+++...++++...
T Consensus 328 inlAl~dA~~LA~~L~~~l~~------~~~~~~al~~Y~~~~~~~~~~i~~~~~~ 376 (591)
T 3i3l_A 328 VHLASQSAVSAAAAIDRITRH------GDEKDAVHAWYNRTYREAYEQYHQFLAS 376 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------GGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC------CchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988754 2345678999999999999888777654
No 18
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.9e-31 Score=282.48 Aligned_cols=326 Identities=18% Similarity=0.134 Sum_probs=191.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhc-cccCc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAG-CVTGD 153 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~-~~~~~ 153 (664)
|++|||+||||||||+++|+.|+++|++|+|+||++.+.... .+ +-.+++. +|+.++ +........ .+...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~-~~--g~~l~~~---~l~~l~--~~~~~~~~~~~~~~~ 73 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV-RC--GEGLSKG---ILNEAD--IKADRSFIANEVKGA 73 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC-CS--CCEEETH---HHHHTT--CCCCTTTEEEEESEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC-ce--ecccCHH---HHHHcC--CCchhhhhhcccceE
Confidence 457999999999999999999999999999999976432211 01 1234554 344442 111100000 00011
Q ss_pred cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEE--cCC-
Q 006025 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVL--ENG- 228 (664)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~--~~g- 228 (664)
.+ .. ..+.....+. ....+...++.++|..|++.|.+.+. ...++++++|+++..+++.+.... .++
T Consensus 74 ~~---~~-~~~~~~~~~~----~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~ 145 (397)
T 3oz2_A 74 RI---YG-PSEKRPIILQ----SEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNE 145 (397)
T ss_dssp EE---EC-TTCSSCEEEE----CSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTE
T ss_pred EE---Ee-CCCceEeecc----ccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeeccccc
Confidence 11 11 0111111111 11123345789999999999988752 235788999999998888765332 233
Q ss_pred -cEEeccEEEEecCCchhhhhhhcCC-CCccccceEEEEEEeccCCCCccccceEEEec---CeeEEEEeeCCCCeEEEE
Q 006025 229 -QCYAGDLLIGADGIWSKVRKNLFGP-QEAIYSGYTCYTGIADFVPADIESVGYRVFLG---HKQYFVSSDVGAGKMQWY 303 (664)
Q Consensus 229 -~~i~adlvVgADG~~S~vR~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 303 (664)
.+++||+||+|||++|.||+++... ....+........+. ....+.+......+.+ ++.+.+.++.+++.....
T Consensus 146 ~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg 224 (397)
T 3oz2_A 146 IVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYR-MINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVG 224 (397)
T ss_dssp EEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEE-EESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEE
T ss_pred ceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEE-eeccccCcccceeeeeccCCCceEEEeecccceeEEE
Confidence 3689999999999999999998422 222333322222211 1112222222233332 345556666666654443
Q ss_pred EEeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccch
Q 006025 304 AFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGG 383 (664)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~ 383 (664)
+....... .........++.+....+.+ ............+........|..+|++|+|||||.++|++|||+
T Consensus 225 ~~~~~~~~---~~~~~~~~~l~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi 297 (397)
T 3oz2_A 225 IGSSINWI---HNRFELKNYLDRFIENHPGL----KKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGI 297 (397)
T ss_dssp EEEETTTS---CSHHHHHHHHHHHHHTCHHH----HTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCH
T ss_pred Eeeccchh---hhhhhHHHHHHHHHHhCccc----cccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhH
Confidence 33222111 11122222333222222222 122222222233333334456788999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHH
Q 006025 384 CMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAV 430 (664)
Q Consensus 384 n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~ 430 (664)
|+||+||..||+.|.++++.+ +..+.+|+.|++.++.+...
T Consensus 298 ~~A~~~g~~~A~~i~~~l~~~------~~~~~~L~~Ye~~~~~~~~~ 338 (397)
T 3oz2_A 298 ANAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFER 338 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHH
Confidence 999999999999999998764 22368899999998877543
No 19
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.97 E-value=8.2e-32 Score=287.51 Aligned_cols=337 Identities=18% Similarity=0.184 Sum_probs=200.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHH-HH-HHHhccccCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVA-EE-VMRAGCVTGD 153 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~-~~-~~~~~~~~~~ 153 (664)
+||+||||||+|+++|+.|+++ |++|+|+||.+.+. ..| .++.+++++++ ..++.+++ +. +..... ...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~-~~g---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~ 73 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE-VLG---WGVVLPGRPGQ--HPANPLSYLDAPERLNPQ-FLE 73 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC-CCC---SEEEEESCTTT--CTTCGGGGSSCGGGGCCE-EEC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC-cce---eEEEeCcHHHH--hhcCcchhhhhhHHHhhc-ccc
Confidence 4899999999999999999999 99999999986542 222 35777777766 22222333 22 211111 000
Q ss_pred cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEE
Q 006025 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCY 231 (664)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i 231 (664)
.+. +.. .+.. .. ...+.+ .+.+.|..|.+.|.+.+. ...++++++|++++.. +++
T Consensus 74 ~~~-~~~--~g~~-~~-------~~~~~~-~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~ 130 (381)
T 3c4a_A 74 DFK-LVH--HNEP-SL-------MSTGVL-LCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLA 130 (381)
T ss_dssp CEE-EEE--SSSE-EE-------CCCCSC-EEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGG
T ss_pred ceE-EEe--CCee-EE-------ecCCCc-eeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccc
Confidence 111 111 1111 10 111233 358999999999988763 2358889999887542 136
Q ss_pred eccEEEEecCCchhhhhhhc---CCCCccccceEEEEEEeccCCCCccccce-EEEecCeeEE-EEeeCCCCeEEEEEEe
Q 006025 232 AGDLLIGADGIWSKVRKNLF---GPQEAIYSGYTCYTGIADFVPADIESVGY-RVFLGHKQYF-VSSDVGAGKMQWYAFH 306 (664)
Q Consensus 232 ~adlvVgADG~~S~vR~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~ 306 (664)
+||+||+|||.+|. |+.+. +.....+....+|.++.... +.... ..+.+.+..+ ..+|..++...|.+..
T Consensus 131 ~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~ 205 (381)
T 3c4a_A 131 DYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLF----DQMNLVFRTHGKDIFIAHAYKYSDTMSTFIVEC 205 (381)
T ss_dssp GCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCC----SSEEEEEEEETTEEEEEEEEECSSSCEEEEEEE
T ss_pred cCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCC----CcceeeEeeCCCcEEEEEEEEecCCeEEEEEEC
Confidence 89999999999999 99873 22222223344555543221 11111 1123444332 3567766655443332
Q ss_pred eCCC---CCCC--CCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCcc
Q 006025 307 KEPA---GGVD--GPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQ 381 (664)
Q Consensus 307 ~~~~---~~~~--~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~Gq 381 (664)
.... .... ......+.+.+.|..|.+.. +.+. ... ..+.++...+..+|..+||+|+|||||.++|++||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~---~~~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~Gq 280 (381)
T 3c4a_A 206 SEETYARARLGEMSEEASAEYVAKVFQAELGGH-GLVS---QPG-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGH 280 (381)
T ss_dssp CHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTTC-CCBC---CTT-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCC
T ss_pred CccccccCCcccCChHHHHHHHHHHhcccCCCc-hhhc---CCC-cceeeeccccCCCcccCCEEEEEccccccCCCccc
Confidence 1100 0110 11123344555555443221 1111 111 12344444556789999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHHHHHHHHhhhhhccCCCcccceee
Q 006025 382 GGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTK 461 (664)
Q Consensus 382 G~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~ 461 (664)
|+|+||+||..|+++|... .+...+|+.|+++|++++..++..++...........++. +.+..+.|+
T Consensus 281 G~~~al~Da~~La~~L~~~----------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~~~r~ 348 (381)
T 3c4a_A 281 GTTMAVVVAQLLVKALCTE----------DGVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMH--LSSAEFVQS 348 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHS----------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--------CHHHH
T ss_pred cHHHHHHHHHHHHHHHhcc----------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhc--CCHHHHHHH
Confidence 9999999999999999873 1357899999999999999999888755433322223343 356677777
Q ss_pred ecccC
Q 006025 462 FRIPH 466 (664)
Q Consensus 462 ~~l~~ 466 (664)
+.+..
T Consensus 349 ~~~~~ 353 (381)
T 3c4a_A 349 FDARR 353 (381)
T ss_dssp GGGTT
T ss_pred Hhhcc
Confidence 77655
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.97 E-value=1.1e-30 Score=285.14 Aligned_cols=330 Identities=15% Similarity=0.101 Sum_probs=197.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.+..+.... +..+ +.+.|+.++ +.+............+
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~--g~~l---~~~~l~~lg--~~~~~~~~~~~~~~~~ 77 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPC--GDAV---SKAHFDKLG--MPYPKGEELENKINGI 77 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCC--CCEE---EHHHHHHTT--CCCCCGGGEEEEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccc--cccc---cHHHHHHhc--CCCCchHHHHhhhcce
Confidence 35899999999999999999999999999999986532111111 1122 456666663 2211100000000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEE-EEEc---CCc
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLE---NGQ 229 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~-v~~~---~g~ 229 (664)
. +... .+.....+ ...++.++|..|++.|.+.+. ...++++++|++++.+++.+. |++. +|+
T Consensus 78 ~-~~~~-~~~~~~~~----------~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~ 145 (453)
T 3atr_A 78 K-LYSP-DMQTVWTV----------NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNE 145 (453)
T ss_dssp E-EECT-TSSCEEEE----------EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTE
T ss_pred E-EECC-CCceEEeE----------CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCc
Confidence 0 0000 00000000 012578999999999988752 345889999999998888765 5554 675
Q ss_pred --EEeccEEEEecCCchhhhhhhcCCC---Cccc--cceEEEEEEeccCCCCccccceEEEec----CeeEEEEeeCCCC
Q 006025 230 --CYAGDLLIGADGIWSKVRKNLFGPQ---EAIY--SGYTCYTGIADFVPADIESVGYRVFLG----HKQYFVSSDVGAG 298 (664)
Q Consensus 230 --~i~adlvVgADG~~S~vR~~l~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 298 (664)
+++||+||+|||.+|.+|+.+.... .+.+ ....++...........+......+.+ ++.+++.+|..++
T Consensus 146 ~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~ 225 (453)
T 3atr_A 146 ELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKN 225 (453)
T ss_dssp EEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETT
T ss_pred eEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCC
Confidence 7999999999999999999884321 1112 112444443322211111111234442 3456666777777
Q ss_pred eEEEEEEeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCC
Q 006025 299 KMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPN 378 (664)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~ 378 (664)
.+.+.+....... .....+.+.+.+..+.+. +..........+.+....+..+|..+|++|+|||||.++|+
T Consensus 226 ~~~vg~~~~~~~~----~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~ 297 (453)
T 3atr_A 226 KVNVGLGIQGGMG----YPSIHEYYKKYLDKYAPD----VDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPV 297 (453)
T ss_dssp EEEEEEEEESSSC----CCCHHHHHHHHHHHHCTT----EEEEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTT
T ss_pred eEEEEEEecCCCC----CCCHHHHHHHHHHhhhhh----cCCCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCC
Confidence 6665544432211 111233333333221110 00000001111223334456788899999999999999999
Q ss_pred CccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHHH
Q 006025 379 LGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 438 (664)
Q Consensus 379 ~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~~ 438 (664)
+|||+|+||+||..||++|.++++.+. ....+|+.|+++|+++....+..++..
T Consensus 298 ~G~G~~~Ai~da~~la~~l~~~l~~~~------~~~~~L~~Y~~~r~~~~~~~~~~~~~~ 351 (453)
T 3atr_A 298 HGGGKGSAMISGYCAAKAILSAFETGD------FSASGLWDMNICYVNEYGAKQASLDIF 351 (453)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTC------CSTTTTTHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCC------ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998876421 114689999999999988777655443
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.97 E-value=4.9e-29 Score=267.42 Aligned_cols=332 Identities=16% Similarity=0.091 Sum_probs=199.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.+....... . +-.+. .+.++.+ |+++....... ....+
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~-~--~~~~~---~~~~~~l--g~~~~~~~~~~-~~~~~ 73 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVR-C--GEGLS---KGILNEA--DIKADRSFIAN-EVKGA 73 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCC-S--CCEEE---THHHHHT--TCCCCTTTEEE-EESEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcc-c--ccccC---HHHHHHc--CCCCChHHhhh-hcceE
Confidence 458999999999999999999999999999999864321111 1 11222 2455666 33221100000 00011
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEE-EEEc---CCc
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLE---NGQ 229 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~-v~~~---~g~ 229 (664)
. +.+. .+.....++. ...+.+.++.++|..|.+.|.+.+. ...++.+++|++++.+++.++ |++. ++.
T Consensus 74 ~-~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~ 147 (397)
T 3cgv_A 74 R-IYGP-SEKRPIILQS----EKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIV 147 (397)
T ss_dssp E-EECT-TCSSCEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEE
T ss_pred E-EEcC-CCCEEEEEec----cccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEE
Confidence 0 1111 1111012211 1112445789999999999988753 235888999999999888877 7763 456
Q ss_pred EEeccEEEEecCCchhhhhhhcCCC-Cccccce-EEEEEEeccCCCCccccceEEEe---cCeeEEEEeeCCCCeEEEEE
Q 006025 230 CYAGDLLIGADGIWSKVRKNLFGPQ-EAIYSGY-TCYTGIADFVPADIESVGYRVFL---GHKQYFVSSDVGAGKMQWYA 304 (664)
Q Consensus 230 ~i~adlvVgADG~~S~vR~~l~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 304 (664)
+++||+||+|||.+|.+|+.+.... ....... .++...... ...+......+. .++.+++.+|.+++...+.+
T Consensus 148 ~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~ 225 (397)
T 3cgv_A 148 DVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMIN--VDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGI 225 (397)
T ss_dssp EEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEES--CCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEE
T ss_pred EEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEecc--CCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEE
Confidence 8999999999999999999984322 2111111 122222211 122222334443 35566777777777655544
Q ss_pred EeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchh
Q 006025 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGC 384 (664)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n 384 (664)
....... .........++.+..+.+.+ ............+....+..+|..+|++++|||||.++|++|||+|
T Consensus 226 ~~~~~~~---~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~ 298 (397)
T 3cgv_A 226 GSSINWI---HNRFELKNYLDRFIENHPGL----KKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIA 298 (397)
T ss_dssp EEETTTC---SCHHHHHHHHHHHHHTCHHH----HTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHH
T ss_pred Eeccccc---cCCCCHHHHHHHHHHhCcCC----CCCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHH
Confidence 4332211 11122233333333333221 1111111222222222445678899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHH
Q 006025 385 MAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (664)
Q Consensus 385 ~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~ 437 (664)
+|++||..|++.|.+++..+ .....+|+.|+++|+++....+..++.
T Consensus 299 ~a~~~a~~la~~l~~~~~~~------~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 345 (397)
T 3cgv_A 299 NAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFERKHLRNWV 345 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887543 123578999999999987766665544
No 22
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.97 E-value=3.2e-29 Score=271.15 Aligned_cols=335 Identities=17% Similarity=0.138 Sum_probs=212.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+|||||++|+++|+.|+++|++|+|+|+...+.... +..+.+.++..|+.+ ++++.+...+.......
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~-----g~~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~ 76 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVI-----GESLLPRCMEHLDEA--GFLDAVKAQGFQQKFGA 76 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCS-----CCBCCGGGHHHHHHT--TCHHHHHHTTCEEECEE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc-----cCcccHhHHHHHHHc--CChHHHHHcCCcccCCc
Confidence 35899999999999999999999999999999986543222 356889999999999 77888876654322222
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEE--EEEcCCc--
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS--VVLENGQ-- 229 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~--v~~~~g~-- 229 (664)
. +... .....++... ......+..+.++|..|.+.|.+.+. ...++++++|++++.+++++. +...+|+
T Consensus 77 ~-~~~~---~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~ 151 (421)
T 3nix_A 77 K-FVRG---KEIADFNFSD-QFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKR 151 (421)
T ss_dssp E-EEET---TEEEEEETTS-CSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEE
T ss_pred E-EEeC---CeeEEEeehh-hcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEE
Confidence 1 1111 1111111111 11122345689999999999988752 235888999999998877754 5557787
Q ss_pred EEeccEEEEecCCchhhhhhhcCCCC-ccccceEEEEEEeccCC-CCccccceEEEe---cCeeEEEEeeCCCCeEEEEE
Q 006025 230 CYAGDLLIGADGIWSKVRKNLFGPQE-AIYSGYTCYTGIADFVP-ADIESVGYRVFL---GHKQYFVSSDVGAGKMQWYA 304 (664)
Q Consensus 230 ~i~adlvVgADG~~S~vR~~l~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 304 (664)
+++||+||+|||.+|.+|+.+..... ..+.....+..+....+ ..........+. ....+++.+|..++...+.+
T Consensus 152 ~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~ 231 (421)
T 3nix_A 152 EIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGF 231 (421)
T ss_dssp EEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEE
T ss_pred EEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEE
Confidence 79999999999999999998742222 22333223322222111 111111112222 24567777788877765544
Q ss_pred EeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCcc-ceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccch
Q 006025 305 FHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGG 383 (664)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~ 383 (664)
........ ......+++++.+..+.+.+.+.+...... .+..+..+. ....+|..+|++|+|||||.++|+.|||+
T Consensus 232 ~~~~~~~~--~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~v~lvGDAa~~~~P~~G~G~ 308 (421)
T 3nix_A 232 VGEPSYFD--EYTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYA-ISASKLYGDGFVLTGNATEFLDPIFSSGA 308 (421)
T ss_dssp EECHHHHT--TSCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCC-BEESCSEETTEEECGGGTCBCCSTTCCHH
T ss_pred EecHHHhh--hcCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecccc-eeeeeeccCCEEEecccccccCCcccccH
Confidence 43211100 011123444444444556666655444322 111111111 22346778999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHH
Q 006025 384 CMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHG 433 (664)
Q Consensus 384 n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~ 433 (664)
|+|++||..|++.|.+.++++ + ...++.|++.++.....+..
T Consensus 309 ~~A~~~a~~la~~l~~~~~~~-----~---~~~~~~y~~~~~~~~~~~~~ 350 (421)
T 3nix_A 309 TFAMESGSKGGKLAVQFLKGE-----E---VNWEKDFVEHMMQGIDTFRS 350 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-----C---CCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCC-----c---hhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987642 1 13567888888776654433
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.96 E-value=7.8e-27 Score=259.35 Aligned_cols=330 Identities=10% Similarity=0.042 Sum_probs=194.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH------------cCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHH
Q 006025 76 KKLRILVAGGGIGGLVFALAAKR------------KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE 143 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~------------~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~ 143 (664)
..+||+||||||+|+++|+.|++ .|++|+|||+...+..+. +..+.|+++++|+.+ |+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~-----g~~~~p~~~~~l~~l--Gi~e~ 78 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGV-----GEGTWPSMRSTLSKI--GIDEN 78 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCS-----CEECCTHHHHHHHHH--TCCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcce-----eeechHhHHHHHHHc--CCCHH
Confidence 45799999999999999999999 999999999865433222 457889999999999 66664
Q ss_pred --HHHhccccCccccccccCCC------Cce-eeecc---------CC--------C-----------------------
Q 006025 144 --VMRAGCVTGDRINGLVDGIS------GSW-YIKFD---------TF--------T----------------------- 174 (664)
Q Consensus 144 --~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~---------~~--------~----------------------- 174 (664)
+...+......+. +.+... +.. ...+. .. .
T Consensus 79 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~ 157 (526)
T 2pyx_A 79 DFIRQCDASFKQGSR-FINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSI 157 (526)
T ss_dssp HHHHHTTCEEECEEE-EESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCT
T ss_pred HHHHHcCCEEECCCc-ccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhh
Confidence 4443321111111 000000 000 00000 00 0
Q ss_pred --cccccCCCeEEeeCHHHHHHHHHHhcC---CceEEeCCeEEEEEeeCCe--EEEEEcCCcEEeccEEEEecCCchhhh
Q 006025 175 --PAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVR 247 (664)
Q Consensus 175 --~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~v~~~~~~--v~v~~~~g~~i~adlvVgADG~~S~vR 247 (664)
.......+..+.++|..|.+.|.+.+. ...++.+ +|++++.++++ +.|++.+|++++||+||+|||.+|.+|
T Consensus 158 ~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~ 236 (526)
T 2pyx_A 158 VTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLL 236 (526)
T ss_dssp TSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCC
T ss_pred hccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHH
Confidence 000011234688999999999987653 2357778 69999876554 467788877899999999999999994
Q ss_pred hhhcCCCCcccc----ceEEEEEEeccCC--CCccccceEEEecCeeEEEEeeCCCCeEEEEEEeeCCCCCCCCCcchHH
Q 006025 248 KNLFGPQEAIYS----GYTCYTGIADFVP--ADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKE 321 (664)
Q Consensus 248 ~~l~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (664)
+...+.....+. ...++........ ..........+. ..++++.+|..+.....+.+. +.. .......+
T Consensus 237 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~pl~~~~~~~~v~~--~~~--~~~~~~~~ 311 (526)
T 2pyx_A 237 GEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQ-PNGWIWDIGLPTRKGVGYVYS--SSH--TNDIDAQK 311 (526)
T ss_dssp CCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEE-TTEEEEEEECSSEEEEEEEEC--TTT--CCHHHHHH
T ss_pred HHHhCCCcccccccccCccEEEEEeeccCCCCCCCCceeEEec-CCCeEEEeeCCCceEEEEEec--CCC--CChHHHHH
Confidence 433232221111 1122221111111 111111112222 334566667665433222221 111 11122334
Q ss_pred HHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHh
Q 006025 322 RLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 401 (664)
Q Consensus 322 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~ 401 (664)
.+.+.+..+.+. +..... ..+.+.. ....+|..+|++|||||||.++|+.|||+|+|++||..|++.|...
T Consensus 312 ~l~~~l~~~~~~----l~~~~~---~~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~- 382 (526)
T 2pyx_A 312 TLFNYLGVDGAA----ADKLEP---RQLAINP-GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN- 382 (526)
T ss_dssp HHHHHHTCCHHH----HHHCCC---EEEECCC-EEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC-
T ss_pred HHHHHHHhcCcc----cccCCc---eEEeccc-CccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc-
Confidence 455555555222 211111 1112211 1234667899999999999999999999999999999998877521
Q ss_pred hhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHH
Q 006025 402 KKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (664)
Q Consensus 402 ~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~ 436 (664)
....+.+|+.|+++|+++...+.++..
T Consensus 383 --------~~~~~~~l~~Y~~~~~~~~~~~~~~~~ 409 (526)
T 2pyx_A 383 --------RMVMDTISARVNERYQQHWQQIIDFLK 409 (526)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------CCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123468999999999999887766543
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.95 E-value=1.6e-26 Score=259.01 Aligned_cols=326 Identities=13% Similarity=0.049 Sum_probs=188.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc------CCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGC 149 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~------g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~ 149 (664)
..+||+||||||+|+++|+.|++. |++|+|+||.+.+..... .+..+.+++++.| + +.+. ..+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~---~g~~l~~~~l~~l--l--~~~~---~~g~ 103 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL---SGACLDPRAFEEL--F--PDWK---EKGA 103 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCC---CCCEECTHHHHHH--C--TTHH---HHTC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccc---cccccCHHHHHHH--H--HHHH---hcCC
Confidence 358999999999999999999999 999999999864322111 1345778777655 3 2222 2222
Q ss_pred ccCc-----cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCC-eE
Q 006025 150 VTGD-----RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KV 221 (664)
Q Consensus 150 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~-~v 221 (664)
.... .+. +.... + ...++.. +......+..+.++|..|.++|.+++. ...++++++|+++..+++ .+
T Consensus 104 ~~~~~~~~~~~~-~~~~~-~--~~~~~~~-~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V 178 (584)
T 2gmh_A 104 PLNTPVTEDRFG-ILTEK-Y--RIPVPIL-PGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSV 178 (584)
T ss_dssp CCCEECCEEEEE-EECSS-C--EEECCCC-TTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSE
T ss_pred ceeeeechhhee-eeccC-C--Ccccccc-CccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCE
Confidence 1111 011 11110 1 1112100 000011122478999999999988763 245889999999988764 45
Q ss_pred E-EEEc------CC---------cEEeccEEEEecCCchhhhhhhc---CCC---CccccceEEEEEEeccCCCCccccc
Q 006025 222 S-VVLE------NG---------QCYAGDLLIGADGIWSKVRKNLF---GPQ---EAIYSGYTCYTGIADFVPADIESVG 279 (664)
Q Consensus 222 ~-v~~~------~g---------~~i~adlvVgADG~~S~vR~~l~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (664)
. |++. +| .+++||+||+|||.+|.+|+.+. +.. .+.+.+ ..+..+............
T Consensus 179 ~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g-~g~~~~~~v~~~~~~~~~ 257 (584)
T 2gmh_A 179 KGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYG-IGLKELWVIDEKKWKPGR 257 (584)
T ss_dssp EEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEE-EEEEEEEECCGGGCCTTE
T ss_pred EEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHH-hhhhhheecCcccccCCe
Confidence 4 6665 33 68999999999999999999872 221 111111 122222211111111111
Q ss_pred eEEEec-------CeeEEEEeeCC--CCeEEEEEEeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeee
Q 006025 280 YRVFLG-------HKQYFVSSDVG--AGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRD 350 (664)
Q Consensus 280 ~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 350 (664)
...+.+ .+. .+.++.. ++.+.+.+......... .....+.+.++. . .+.+.+.+............
T Consensus 258 ~~~~~g~~~~~~~~gg-~~~~~~~~~~~~~~vg~~~~~~~~~~--~~~~~~~l~~~~-~-~p~i~~~l~~~~~~~~~~~~ 332 (584)
T 2gmh_A 258 VDHTVGWPLDRHTYGG-SFLYHLNEGEPLLALGFVVGLDYQNP--YLSPFREFQRWK-H-HPSIKPTLEGGKRIAYGARA 332 (584)
T ss_dssp EEEEEETTSCTTSCEE-EEEEECCSSSCEEEEEEEEETTCCCT--TCCHHHHHHHHT-T-STTTHHHHTTCEEEEEEEEE
T ss_pred EEEEEeccccCCcCCc-eEEEEecCCCCeEEEEEEEecCcccc--cCChHHHHHHHH-h-ChHHHHHhCCCeEEEecceE
Confidence 122221 122 2334555 56665555443322111 111334443332 2 34455555332211111111
Q ss_pred cc--cCCCCccccCCcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHH---HHHHHHHhh
Q 006025 351 IY--DRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSA---LKSYERARR 425 (664)
Q Consensus 351 ~~--~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~---L~~Ye~~R~ 425 (664)
++ ......+|..+|++|||||||.++|+.|||+|+||+||..||+.|..+++.+ . .....+ |+.|+++|+
T Consensus 333 ~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g----~-~~~~~a~~~L~~Ye~~r~ 407 (584)
T 2gmh_A 333 LNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSE----N-LQSKTIGLHVTEYEDNLK 407 (584)
T ss_dssp EECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCC----C-CCCSSSSCCCTHHHHHHH
T ss_pred ccCCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcC----C-cchhhhhhhHHHHHHHHH
Confidence 22 1223567889999999999999999999999999999999999999987532 0 001233 899999999
Q ss_pred hH
Q 006025 426 LR 427 (664)
Q Consensus 426 ~~ 427 (664)
++
T Consensus 408 ~~ 409 (584)
T 2gmh_A 408 NS 409 (584)
T ss_dssp TS
T ss_pred Hh
Confidence 87
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.94 E-value=1.9e-25 Score=247.63 Aligned_cols=324 Identities=12% Similarity=0.031 Sum_probs=185.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHH---cCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHH--HHHhcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEE--VMRAGCVT 151 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~--~~~~~~~~ 151 (664)
.+||+|||||++|+++|+.|++ +|++|+|+|+...+..+. +..+.+....+++.+ |+.+. +.......
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~-----g~~~~~~~~~~l~~l--gi~~~~~~~~~~~~~ 74 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGV-----GEATFSTVRHFFDYL--GLDEREWLPRCAGGY 74 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------C-----CEECCTTHHHHHHHH--TCCHHHHHHHTTCEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceee-----ccccCcchHHHHHHc--CCCHHHHHHHcCCeE
Confidence 3699999999999999999999 999999999975432222 356778888999988 45443 33322111
Q ss_pred CccccccccCC-CCc-eeeecc--------------------------------------CC-----Cccc----c----
Q 006025 152 GDRINGLVDGI-SGS-WYIKFD--------------------------------------TF-----TPAA----E---- 178 (664)
Q Consensus 152 ~~~~~~~~~~~-~~~-~~~~~~--------------------------------------~~-----~~~~----~---- 178 (664)
...+. +.+.. .+. ....+. .. .... .
T Consensus 75 ~~~~~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 153 (511)
T 2weu_A 75 KLGIR-FENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLG 153 (511)
T ss_dssp ECEEE-EESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CC
T ss_pred eccce-ecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCcccccccccc
Confidence 10000 00000 000 000000 00 0000 0
Q ss_pred ------cC--CCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCe--EEEEEcCCcEEeccEEEEecCCchhh
Q 006025 179 ------KG--LPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKV 246 (664)
Q Consensus 179 ------~~--~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~--v~v~~~~g~~i~adlvVgADG~~S~v 246 (664)
.. .+..+.++|..|.+.|.+.+. ...++.+ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 154 RSTLAEQRAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp SCCGGGCCSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred ccccccCcCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 01 345688999999999988752 2357778 99999886555 67888889899999999999999999
Q ss_pred hhhhcCCCC-----ccccceEEEEEEeccCCC-CccccceEEEecCeeEEEEeeCCCCeEEEEEEeeCCCCCCCCCcchH
Q 006025 247 RKNLFGPQE-----AIYSGYTCYTGIADFVPA-DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKK 320 (664)
Q Consensus 247 R~~l~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (664)
|+.+.+... ..+.. .++......... ....... ....+..+++.+|..+ ...+..... .. . .......
T Consensus 233 ~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~P~~~-~~~~g~~~~-~~-~-~~~~~~~ 306 (511)
T 2weu_A 233 INQTLGGRFQSFSDVLPNN-RAVALRVPRENDEDMRPYTT-ATAMSAGWMWTIPLFK-RDGNGYVYS-DE-F-ISPEEAE 306 (511)
T ss_dssp CCCCTCCCEEECTTTCCCC-EEEEEEEECSSGGGCCSSEE-EEEETTEEEEEEECSS-EEEEEEEEC-TT-T-SCHHHHH
T ss_pred HHHHhCCCCccccccCccc-ceEEEEeccCCCCCCCccee-ceecCCCcEEEEECCC-ceEEEEEEC-CC-C-CCHHHHH
Confidence 765533221 11121 122111111111 0111112 2223344566667655 332222221 11 1 1111222
Q ss_pred HHHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHH
Q 006025 321 ERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKA 400 (664)
Q Consensus 321 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~ 400 (664)
+.+.+.+ .+.+. ....... .+.. .....|..+|++|||||||.++|+.|||+|+|++||..|++.|..
T Consensus 307 ~~l~~~~-~~~~~-------~~~~~~~--~~~~-~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~- 374 (511)
T 2weu_A 307 RELRSTV-APGRD-------DLEANHI--QMRI-GRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG- 374 (511)
T ss_dssp HHHHHHH-CTTCT-------TSCCEEE--ECCC-EEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC-
T ss_pred HHHHHHh-Ccccc-------cccceeE--Eeec-cccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc-
Confidence 2333333 22211 0111111 1111 112356679999999999999999999999999999999988752
Q ss_pred hhhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHH
Q 006025 401 CKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 436 (664)
Q Consensus 401 ~~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~ 436 (664)
. ...+.+|+.|+++|+++...+.++..
T Consensus 375 --~-------~~~~~~l~~Y~~~~~~~~~~~~~~~~ 401 (511)
T 2weu_A 375 --E-------RWDPVLISAYNERMAHMVDGVKEFLV 401 (511)
T ss_dssp --T-------TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --C-------CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12357899999999999887766543
No 26
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=2.7e-26 Score=248.46 Aligned_cols=325 Identities=18% Similarity=0.192 Sum_probs=184.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
.+||+||||||+|+++|+.|+++|++|+|||+.+.+....|.......+...++..++.++.+.|..... ......+.
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~ 99 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEF--GYFGHYYY 99 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHH--CEEEEEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcc--cccceeEE
Confidence 4799999999999999999999999999999986433222222222334556777777775444433211 11111111
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCC--ceEEeCC-eEEEEEeeCCeEEEEEcCCcEEec
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNES-NVIDFKDHGDKVSVVLENGQCYAG 233 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~-~v~~v~~~~~~v~v~~~~g~~i~a 233 (664)
..+ .. ...+.. .. ....+.+++..+...|.+.+.. ..++... ++.+++ ....++
T Consensus 100 --~~~-~~--~~~~~~-----~~-~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~a 156 (430)
T 3ihm_A 100 --VGG-PQ--PMRFYG-----DL-KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQY 156 (430)
T ss_dssp --ECS-SS--CEEEEE-----EE-EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTTS
T ss_pred --ECC-CC--ccccch-----hc-CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhcccC
Confidence 010 00 111110 00 1234678999999988877521 2232211 111110 011268
Q ss_pred cEEEEecCCchhhhhhhcCCCCccc--cceEEEEEEe-ccCCCCccccceEEEecCeeEEEEeeC-CCCeEEEEEEeeCC
Q 006025 234 DLLIGADGIWSKVRKNLFGPQEAIY--SGYTCYTGIA-DFVPADIESVGYRVFLGHKQYFVSSDV-GAGKMQWYAFHKEP 309 (664)
Q Consensus 234 dlvVgADG~~S~vR~~l~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 309 (664)
|+||+|||.+|.+|..........| .+.....++. ...+.+.....+..+.+.+..++.+.. .++...++++...+
T Consensus 157 d~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~ 236 (430)
T 3ihm_A 157 DLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHI 236 (430)
T ss_dssp SEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECT
T ss_pred CEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEecC
Confidence 9999999999999854422211122 2222222222 122222223345555555655544322 23444444444333
Q ss_pred CCCC---------CCCcchHHHHHHHHhCCChhHHHHHHcCC------ccceeeeec--ccCCCCccccCCcEEE-EccC
Q 006025 310 AGGV---------DGPEGKKERLLKIFEGWCDNVVDLILATD------EEAILRRDI--YDRTPIFTWGRGRVTL-LGDS 371 (664)
Q Consensus 310 ~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~------~~~~~~~~~--~~~~~~~~~~~~rv~L-vGDA 371 (664)
.... ..+....+.+.+.+..|.+.+.+.+.... ...+....+ ....+..+|..+|++| +|||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~GDA 316 (430)
T 3ihm_A 237 GSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGLGDI 316 (430)
T ss_dssp TSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEECGGG
T ss_pred CCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeecccccccccCCCCEEEEecCc
Confidence 2111 01222234677778888887766654443 111211111 1123456889999999 9999
Q ss_pred cCcCCCCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChhhHHHHHHHHHHHhh-hHHHHHHHhHH
Q 006025 372 VHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR-LRVAVIHGLAR 436 (664)
Q Consensus 372 Ah~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~~~~~~L~~Ye~~R~-~~~~~~~~~s~ 436 (664)
||.++|++|||+|+||+||.+|+++|.... +...+|..|+.+|+ .++....+.+.
T Consensus 317 ah~~~p~~g~G~~~a~~da~~l~~~l~~~~----------~~~~~~~~~~~~r~~~~~~~~~~~~~ 372 (430)
T 3ihm_A 317 QATVDPVLGQGANMASYAAWILGEEILAHS----------VYDLRFSEHLERRRQDRVLCATRWTN 372 (430)
T ss_dssp TEECCGGGCCHHHHHHHHHHHHHHHHHHCS----------CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCchhhhHHHHHHHHHHHHHHHHhcC----------CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998741 23589999999998 55555544443
No 27
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.94 E-value=2e-25 Score=248.71 Aligned_cols=325 Identities=11% Similarity=0.055 Sum_probs=187.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH---cCCeEEEEccCCccccCCCCcccceeeCchHHH-HHHhcChhHHHH--HHHhcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEE--VMRAGC 149 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~L~~l~~g~~~~--~~~~~~ 149 (664)
..+||+|||||++|+++|+.|++ .|++|+|||+...+..+. +..+.+.+.. +++.+ |+.+. +.....
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~~~~~~~~l~~l--G~~~~~~~~~~~~ 76 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGV-----GEATIPSLQKVFFDFL--GIPEREWMPQVNG 76 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCS-----CEECCTHHHHHTHHHH--TCCHHHHGGGGTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCC-----CcccchhHHHHHHHHh--CCCHHHHHHhcCc
Confidence 35799999999999999999999 999999999965332222 3567888888 88888 44332 222111
Q ss_pred ccCc--cccccccC---C-CCceeeeccC---------------------C-C-----------------c---ccccCC
Q 006025 150 VTGD--RINGLVDG---I-SGSWYIKFDT---------------------F-T-----------------P---AAEKGL 181 (664)
Q Consensus 150 ~~~~--~~~~~~~~---~-~~~~~~~~~~---------------------~-~-----------------~---~~~~~~ 181 (664)
.... .+..+... . .......+.. . . + ......
T Consensus 77 ~~~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (538)
T 2aqj_A 77 AFKAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQM 156 (538)
T ss_dssp EEECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCS
T ss_pred hhhCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCC
Confidence 1000 00000000 0 0000000000 0 0 0 000013
Q ss_pred CeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCe--EEEEEcCCcEEeccEEEEecCCchhhhhhhcCCCCcc
Q 006025 182 PVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVRKNLFGPQEAI 257 (664)
Q Consensus 182 ~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~--v~v~~~~g~~i~adlvVgADG~~S~vR~~l~~~~~~~ 257 (664)
+..+.++|..|.+.|.+.+. ...++.+ +|++++.++++ +.|++.+|++++||+||+|||.+|.+|+.+.+.....
T Consensus 157 ~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~ 235 (538)
T 2aqj_A 157 SHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFID 235 (538)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEE
T ss_pred CccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccc
Confidence 45789999999999988752 2356778 89999876554 5788888889999999999999999976654332111
Q ss_pred cc----ceEEEEEEeccCCC--CccccceEEEecCeeEEEEeeCCCCeEEEEEEeeCCCCCCCCCcchHHHHHHHHhCCC
Q 006025 258 YS----GYTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWC 331 (664)
Q Consensus 258 ~~----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 331 (664)
+. ...++......... ..... ........++++..|..+.....+. +.. . ........+.+.+.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~p~~~~~~~g~v-~~~-~--~~~~~~~~~~l~~~~~~~- 309 (538)
T 2aqj_A 236 MSDYLLCDSAVASAVPNDDARDGVEPY-TSSIAMNSGWTWKIPMLGRFGSGYV-FSS-H--FTSRDQATADFLKLWGLS- 309 (538)
T ss_dssp CTTTCCCCEEEEEEEECCHHHHCCCSS-EEEEECSSEEEEEEEETTEEEEEEE-ECT-T--TSCHHHHHHHHHHHHTCC-
T ss_pred cccccccceEEEEecccCCcccCCCCc-eeeeecCCceEEEecCCCceEEEEE-EcC-C--CCChHHHHHHHHHHhcCC-
Confidence 11 11222211111100 01111 1122334456666666553222222 211 1 111112223344444321
Q ss_pred hhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHhhhcCCCCChh
Q 006025 332 DNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPI 411 (664)
Q Consensus 332 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~~~~~~~g~~~ 411 (664)
+ + .. . ....+.. ....+|..+|++|||||||.++|+.|||+|+|++||..|++.|.. . .
T Consensus 310 ~-~------~~-~--~~~~~~~-~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~---~-------~ 368 (538)
T 2aqj_A 310 D-N------QP-L--NQIKFRV-GRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD---T-------S 368 (538)
T ss_dssp T-T------CC-C--EEEECCC-EEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB---T-------T
T ss_pred C-C------CC-c--eEEeecc-ccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc---c-------C
Confidence 1 0 11 1 1111111 123456789999999999999999999999999999999987742 1 1
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHhH
Q 006025 412 DIVSALKSYERARRLRVAVIHGLA 435 (664)
Q Consensus 412 ~~~~~L~~Ye~~R~~~~~~~~~~s 435 (664)
..+.+|+.|+++|+++...+.++.
T Consensus 369 ~~~~~l~~Y~~~~~~~~~~~~~~~ 392 (538)
T 2aqj_A 369 FDPRLSDAFNAEIVHMFDDCRDFV 392 (538)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 235789999999999887665543
No 28
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.94 E-value=2.8e-25 Score=247.93 Aligned_cols=328 Identities=10% Similarity=0.051 Sum_probs=189.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH---cCCeEEEEccCCccccCCCCcccceeeCchHHH-HHHhcChhHHHH--HHHhcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALA-ALEAIDLDVAEE--VMRAGC 149 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~L~~l~~g~~~~--~~~~~~ 149 (664)
..+||+|||||++|+++|+.|++ .|++|+|||+...+..+. +..+.|++.. +++.+ |+.+. +.....
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~-----g~~~~p~~~~~~l~~l--Gi~~~~~~~~~~~ 96 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGV-----GEATIPNLQTAFFDFL--GIPEDEWMRECNA 96 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCC-----CEECCTHHHHHTHHHH--TCCHHHHHHHTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccce-----eeeechhHHHHHHHHh--CCChHHHHHhcCC
Confidence 46799999999999999999999 999999999975433222 3567889999 99988 55544 433221
Q ss_pred ccCccccc-cccCC-------------CCceeeeccC----------------------C-C---c------ccc-----
Q 006025 150 VTGDRING-LVDGI-------------SGSWYIKFDT----------------------F-T---P------AAE----- 178 (664)
Q Consensus 150 ~~~~~~~~-~~~~~-------------~~~~~~~~~~----------------------~-~---~------~~~----- 178 (664)
.....+.. .+... .......+.. . . . ...
T Consensus 97 ~~~~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 176 (550)
T 2e4g_A 97 SYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSP 176 (550)
T ss_dssp EEECEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCS
T ss_pred eEEEeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhh
Confidence 11111100 00000 0000011100 0 0 0 000
Q ss_pred ------cCCCeEEeeCHHHHHHHHHHhcC---CceEEeCCeEEEEEeeCCe--EEEEEcCCcEEeccEEEEecCCchhhh
Q 006025 179 ------KGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDK--VSVVLENGQCYAGDLLIGADGIWSKVR 247 (664)
Q Consensus 179 ------~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~v~~~~~~--v~v~~~~g~~i~adlvVgADG~~S~vR 247 (664)
...+..+.++|..|.+.|.+.+. ...++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~ 255 (550)
T 2e4g_A 177 RRLDGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLI 255 (550)
T ss_dssp BCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCC
T ss_pred HhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhH
Confidence 02345688999999999988752 3457788 99999876554 678888898999999999999999995
Q ss_pred hhhcCCCCccccc----eEEEEEEeccCCC--CccccceEEEecCeeEEEEeeCCCCeEEEEEEeeCCCCCCCCCcchHH
Q 006025 248 KNLFGPQEAIYSG----YTCYTGIADFVPA--DIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKE 321 (664)
Q Consensus 248 ~~l~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (664)
+.+.+.....+.. ..++......... ..... .........+++..|..+. ........ .. ........+
T Consensus 256 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~ipl~~~-~~~g~v~~-~~--~~~~~~~~~ 330 (550)
T 2e4g_A 256 NKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPF-TSAIAMKSGWTWKIPMLGR-FGTGYVYS-SR--FATEDEAVR 330 (550)
T ss_dssp CCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSS-EEEEECSSEEEEEEECSSE-EEEEEEEC-TT--TSCHHHHHH
T ss_pred HHHhCCCcccccccccccceEEEeecccCCcccCCCc-eeeeecCCceEEEccCCCc-cceEEEEe-cC--CCChHHHHH
Confidence 5443322111111 1111111111100 01111 1122234455555566542 22222221 11 111111222
Q ss_pred HHHHHHhCCChhHHHHHHcCCccceeeeecccCCCCccccCCcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHh
Q 006025 322 RLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 401 (664)
Q Consensus 322 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~ 401 (664)
.+.+.+... +.+ ...... .+ ......+|..+|++|||||||+++|+.|||+|+|++||..|++.|...
T Consensus 331 ~l~~~~~~~-p~l-------~~~~~i--~~-~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~~- 398 (550)
T 2e4g_A 331 EFCEMWHLD-PET-------QPLNRI--RF-RVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPDK- 398 (550)
T ss_dssp HHHHHTTCC-TTT-------SCCEEE--EC-CCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCCT-
T ss_pred HHHHhhCcC-ccc-------CCCceE--Ee-cCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcccc-
Confidence 333333221 110 111111 11 111233466799999999999999999999999999999999877421
Q ss_pred hhcCCCCChhhHHHHHHHHHHHhhhHHHHHHHhHHH
Q 006025 402 KKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 437 (664)
Q Consensus 402 ~~~~~~g~~~~~~~~L~~Ye~~R~~~~~~~~~~s~~ 437 (664)
...+.+|+.|+++|+++...+.++...
T Consensus 399 ---------~~~~~~l~~Y~~~~~~~~~~i~~~~~~ 425 (550)
T 2e4g_A 399 ---------SLNPVLTARFNREIETMFDDTRDFIQA 425 (550)
T ss_dssp ---------TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123679999999999999877765543
No 29
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.83 E-value=9.8e-21 Score=166.77 Aligned_cols=101 Identities=23% Similarity=0.380 Sum_probs=82.5
Q ss_pred CCcEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEE-----------ECCEEEEE
Q 006025 527 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY-----------KDGAFYLI 595 (664)
Q Consensus 527 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~-----------~~~~~~~~ 595 (664)
...|.|..+.++.. .+.+.|. .+..++|||+++ |||+|+++.|||+||.|.+ .++.|+|+
T Consensus 18 ~~~~~L~v~k~g~~-~~~~~L~---~~~~~~IGR~~~-----~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~ 88 (130)
T 4h87_A 18 TAPYSLETLKGGTI-LGTRSLK---GTSYCLFGRLSG-----CDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLY 88 (130)
T ss_dssp CSCCEEEEEETTEE-EEEEECT---TCSEEEEESSTT-----SSEECCCTTSCSSCEEEEEBCCCCCC------CCEEEE
T ss_pred CCCEEEEEEECCee-eeeEEeC---CCceEEEcCCcC-----CCEEeCCCCcchhcEEEEEecccCccceeccCCcceEe
Confidence 45688877765432 1445554 234589999998 9999999999999999965 36679999
Q ss_pred ECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEE
Q 006025 596 DLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 642 (664)
Q Consensus 596 Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~ 642 (664)
||+|+|||||||+ +|.++++++|++||+|+||..+.. |.++
T Consensus 89 Dl~StNGT~vNg~-----ri~~~~~~~L~~GD~I~~G~str~-yvl~ 129 (130)
T 4h87_A 89 DLGSTHGTFLNKT-----RIPPRTYCRVHVGHVVRFGGSTRL-FILQ 129 (130)
T ss_dssp ECSCSSCEEETTE-----ECCTTCCEECCTTCEEEETTCSEE-EEEE
T ss_pred eCCCCCceEECCE-----ECCCCceeECCCCCEEEECCceEE-EEEc
Confidence 9999999999999 999999999999999999998776 8764
No 30
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.82 E-value=1.1e-19 Score=199.83 Aligned_cols=137 Identities=23% Similarity=0.205 Sum_probs=100.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
...+||+||||||+|+++|+.|+++|++|+|+|+.+.... . ....+.+.+++.|+.+ |+++.. + .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~----~-~~~~~~~~~~~~l~~~--g~~~~~---~-----~ 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR----H-NVLHLWPFTIHDLRAL--GAKKFY---G-----R 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC----C-CEEECCHHHHHHHHTT--THHHHC---T-----T
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC----C-CcccCChhHHHHHHHc--CCcccc---c-----c
Confidence 3468999999999999999999999999999999754321 1 1355778888888877 554321 0 0
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEee---CCeEEEEE--c-
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH---GDKVSVVL--E- 226 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~---~~~v~v~~--~- 226 (664)
+... . ...+.+..|.+.|.+.+. ...++++++|++++.+ ++.+.|++ .
T Consensus 155 ---~~~~--------------------~-~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~ 210 (497)
T 2bry_A 155 ---FCTG--------------------T-LDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNP 210 (497)
T ss_dssp ---TTCT--------------------T-CCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCC
T ss_pred ---cccc--------------------c-cccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECC
Confidence 0000 0 124667788888877652 3458889999999874 34677777 4
Q ss_pred CC--cEEeccEEEEecCCchhhhhhh
Q 006025 227 NG--QCYAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 227 ~g--~~i~adlvVgADG~~S~vR~~l 250 (664)
+| ++++||+||+|||.+|.+|+..
T Consensus 211 ~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 211 PAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp CHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred CCCEEEEEcCEEEECCCCCccccccc
Confidence 56 5799999999999999999865
No 31
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.79 E-value=3.3e-19 Score=157.29 Aligned_cols=98 Identities=21% Similarity=0.247 Sum_probs=82.1
Q ss_pred EEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEE--CCEEEEEECCCCceeEEeC
Q 006025 530 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 607 (664)
Q Consensus 530 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~~~Dl~S~nGt~vn~ 607 (664)
++.+..++. ...+.+.|. ...++|||+++ |||+++++.|||+||+|.++ ++.|+|+||+|+|||||||
T Consensus 26 ~L~v~~g~~-~~g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg 95 (132)
T 3va4_A 26 QLRLFSGTH-GPERDFPLY----LGKNVVGRSPD-----CSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVK 95 (132)
T ss_dssp EEEECCBTT-BSCEEEEEC----SEEEEEESSTT-----SSEECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETT
T ss_pred EEEEEeCCC-CCceEEEEC----CCCEEEccCCC-----CCEEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECC
Confidence 344433443 233888888 88899999999 99999999999999999997 6889999999999999999
Q ss_pred CCCceee--cCCCCcEEeCCCCEEEECCCceeEEEEEEec
Q 006025 608 NEGRRYR--VSSNFPARFRPSDTIEFGSDKKAIFRVKVIG 645 (664)
Q Consensus 608 ~~~~~~~--l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~~ 645 (664)
. + |.+++++.|++||+|+||+.. |++....
T Consensus 96 ~-----~i~l~~~~~~~L~~GD~I~lG~~~---l~f~~~~ 127 (132)
T 3va4_A 96 P-----PRVLPPGVSHRLRDQELILFADFP---CQYHRLD 127 (132)
T ss_dssp T-----TEEECTTCCEECCTTCEEEETTEE---EEEEECC
T ss_pred E-----EcccCCCCEEECCCCCEEEECCEE---EEEEECC
Confidence 8 5 788899999999999999975 5555553
No 32
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.78 E-value=1e-18 Score=152.36 Aligned_cols=94 Identities=21% Similarity=0.274 Sum_probs=79.4
Q ss_pred cEEEEecCCCCCCCCCeEEeeccCC-CCEEecCC-CCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEEe
Q 006025 529 EWFLVPSGSENVVSQPIYLSVSHEN-EPYLIGSE-SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 606 (664)
Q Consensus 529 ~~~l~~~~~~~~~~~~~~l~~~~~~-~~~~iGR~-~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~vn 606 (664)
.|.|.... +....+.+.|. . ..++|||+ +. |||+|+++.|||+||+|.++++.|+|+|++|+||||||
T Consensus 12 ~l~L~v~~-g~~~g~~~~l~----~~~~~~iGR~~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vn 81 (118)
T 1uht_A 12 SLRLVFVK-GPREGDALDYK----PGSTIRVGRIVRG-----NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLN 81 (118)
T ss_dssp EEEEEESS-STTTTCBCCBC----TTCCEEEESSSTT-----CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEES
T ss_pred eEEEEEEe-CCCCCcEEEEC----CCCEEEEcCCCCC-----CCEEeCCCCCchHHeEEEEECCEEEEEECCCCCCeEEC
Confidence 34444443 22223677776 5 57999999 66 99999999999999999999999999999999999999
Q ss_pred CCCCceeecCCCCcEEeCCCCEEEECCCcee
Q 006025 607 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKA 637 (664)
Q Consensus 607 ~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~ 637 (664)
++ +|.+++++.|++||+|+||...+.
T Consensus 82 g~-----~l~~~~~~~L~~gd~i~lG~~~~~ 107 (118)
T 1uht_A 82 SN-----ALDPETSVNLGDGDVIKLGEYTSI 107 (118)
T ss_dssp SS-----BCCTTCEEECCTTEEEEETTTEEE
T ss_pred CE-----ECCCCCeEEcCCCCEEEECCeEEE
Confidence 99 999988999999999999998644
No 33
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.76 E-value=1.9e-18 Score=147.43 Aligned_cols=98 Identities=20% Similarity=0.409 Sum_probs=80.5
Q ss_pred CCcEEEEecCCCCCCCCCeEEeeccCCC-CEEecCCC-CCCCCcceeEeCCCcccccceEEEEE-CCEEEEEECCCCcee
Q 006025 527 NGEWFLVPSGSENVVSQPIYLSVSHENE-PYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGT 603 (664)
Q Consensus 527 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~iGR~~-~~~~~~~~i~~~~~~vSr~Ha~i~~~-~~~~~~~Dl~S~nGt 603 (664)
.+.|.|....... ..+.+.|. .. .++|||++ + |||+++++.|||+||+|.++ ++.|+|+|++|+|||
T Consensus 2 ~~~~~L~v~~G~~-~g~~~~l~----~~~~~~iGR~~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt 71 (106)
T 3gqs_A 2 PSRFLLKVLAGAN-IGAEFHLD----SGKTYIVGSDPQV-----ADIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGV 71 (106)
T ss_dssp -CEEEEEECC-CC-TTCEEEEC----TTCEEEEESCTTT-----CSEECCCTTSCSSCEEEEECTTSCEEEEECSCSSCC
T ss_pred CceEEEEEEeCCC-CcEEEEEC----CCCEEEEeECCCc-----CCEEeCCCCcchhhcEEEECCCCcEEEEECcCCCCe
Confidence 3568777774332 23778887 64 58999999 6 99999999999999999999 788999999999999
Q ss_pred EEeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 006025 604 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 604 ~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
||||+ ++.+ ++.|++||+|+||... |++...
T Consensus 72 ~vng~-----~i~~--~~~L~~Gd~i~~G~~~---~~~~~~ 102 (106)
T 3gqs_A 72 IVEGR-----KIEH--QSTLSANQVVALGTTL---FLLVDY 102 (106)
T ss_dssp EETTE-----ECSS--EEECCTTCCEEETTEE---EEEEEE
T ss_pred EECCE-----ECCC--CeECCCCCEEEECCEE---EEEEcc
Confidence 99999 8875 5799999999999974 555443
No 34
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.76 E-value=1.6e-18 Score=146.36 Aligned_cols=82 Identities=24% Similarity=0.391 Sum_probs=73.7
Q ss_pred CCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEEeCCCCceeecCCCCcEE
Q 006025 543 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 622 (664)
Q Consensus 543 ~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~ 622 (664)
+.+.|. +..++|||+++ ||++++++.|||+||+|.++++.|+|+|++|+|||||||+ ++. +++
T Consensus 16 ~~~~l~----~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~---~~~ 78 (100)
T 3po8_A 16 RTYQLR----EGSNIIGRGQD-----AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EWQ 78 (100)
T ss_dssp CEEECC----SEEEEEESSTT-----CSEECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EEE
T ss_pred cEEEEC----CCCEEEeCCCC-----CCEECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCE-----ECc---eEE
Confidence 778887 78899999998 9999999999999999999999999999999999999998 775 589
Q ss_pred eCCCCEEEECCCceeEEEEE
Q 006025 623 FRPSDTIEFGSDKKAIFRVK 642 (664)
Q Consensus 623 l~~gd~i~~g~~~~~~~~~~ 642 (664)
|++||+|+||...+. |++.
T Consensus 79 L~~gd~i~iG~~~~~-~~~~ 97 (100)
T 3po8_A 79 LADGDVIRLGHSEII-VRMH 97 (100)
T ss_dssp CCTTCEEEETTEEEE-EEEE
T ss_pred CCCCCEEEECCEEEE-EEEE
Confidence 999999999997544 4443
No 35
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.76 E-value=2.6e-18 Score=153.77 Aligned_cols=103 Identities=17% Similarity=0.280 Sum_probs=87.1
Q ss_pred hcCCcEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCc----ccccceEEEE-ECCEEEEEECCC
Q 006025 525 AMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISY-KDGAFYLIDLQS 599 (664)
Q Consensus 525 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~----vSr~Ha~i~~-~~~~~~~~Dl~S 599 (664)
+....|.|...+... ..+.|. .+..++|||+++ |||+|+++. |||.||+|.+ .++.|+|+|++|
T Consensus 5 ~~~~~w~l~~~G~~~---~~~~l~---~~~~~~IGR~~~-----~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S 73 (138)
T 2pie_A 5 AGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKS 73 (138)
T ss_dssp GGCEEEEEEETTCSS---CBEEEC---TTCCEEEESSSS-----SSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECSC
T ss_pred CCCccEEEEEeCCCC---CEEEec---CCCeEEECCCCC-----CCEEeCCCCcCCCCChhHeEEEEcCCCcEEEEECCC
Confidence 456779999887664 456664 256799999998 999999998 9999999999 588899999999
Q ss_pred CceeEEeCCCCceeecCCCCcEEeCCCCEEEECCC-----ceeEEEEEEe
Q 006025 600 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD-----KKAIFRVKVI 644 (664)
Q Consensus 600 ~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~-----~~~~~~~~~~ 644 (664)
+|||||||. +|.+++++.|++||+|+||.. ... |.++..
T Consensus 74 ~NGT~vNg~-----~l~~~~~~~L~~GD~I~lG~~~~~~~~~~-f~~~~~ 117 (138)
T 2pie_A 74 LNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAE-YEYEVT 117 (138)
T ss_dssp SSCEEETTE-----ECCTTCCEECCTTCEEEESCCCTTCSSCS-EEEEEE
T ss_pred CCCeEECCE-----EcCCCCcEECCCCCEEEECCCCCCCceEE-EEEEec
Confidence 999999999 999999999999999999983 333 666654
No 36
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.75 E-value=4e-18 Score=147.68 Aligned_cols=95 Identities=24% Similarity=0.396 Sum_probs=79.9
Q ss_pred CCcEEEEec-CCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEE
Q 006025 527 NGEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 605 (664)
Q Consensus 527 ~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~v 605 (664)
...+.|... +...+ +.+.|. +..++|||+++ |||+|+++.|||+||+|.++++.|+|+|++|+|||||
T Consensus 9 ~~~~~L~v~~g~~~g--~~~~l~----~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~v 77 (115)
T 2xt9_B 9 SGSALLVVKRGPNAG--SRFLLD----QPTTSAGRHPD-----SDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYV 77 (115)
T ss_dssp CSCEEEEEEESTTTT--CEEEEC----SSEEEEESSTT-----SSEECCSTTSCSSCEEEEEETTEEEEEECSCSSCEEE
T ss_pred CCcEEEEEEeCCCCC--eEEEEC----CCCEEECCCCC-----CCEEeCCcccChhheEEEEECCEEEEEECCCCCCeEE
Confidence 344544444 55544 778887 78999999998 9999999999999999999999999999999999999
Q ss_pred eCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEE
Q 006025 606 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 643 (664)
Q Consensus 606 n~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~ 643 (664)
||. ++. ++.|++||+|+||... |++..
T Consensus 78 ng~-----~i~---~~~L~~gd~i~iG~~~---l~~~~ 104 (115)
T 2xt9_B 78 NRE-----PVD---SAVLANGDEVQIGKFR---LVFLT 104 (115)
T ss_dssp TTE-----ECS---EEEECTTCEEEETTEE---EEEEC
T ss_pred CCE-----Ecc---eEECCCCCEEEECCEE---EEEEe
Confidence 998 886 5899999999999863 44443
No 37
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.74 E-value=4.4e-18 Score=152.30 Aligned_cols=92 Identities=24% Similarity=0.387 Sum_probs=79.5
Q ss_pred hcCCcEEEEec-CCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCcee
Q 006025 525 AMNGEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT 603 (664)
Q Consensus 525 ~~~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt 603 (664)
...+.|.|+.. +...+ +.+.|. +..++|||+++ |||+|+++.|||+||+|.++++.|+|+|++|+|||
T Consensus 42 ~p~~~~~L~v~~G~~~g--~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~~l~DlgS~NGT 110 (143)
T 2kb3_A 42 LPAGSALLVVKRGPNAG--ARFLLD----QPTTTAGRHPE-----SDIFLDDVTVSRRHAEFRINEGEFEVVDVGSLNGT 110 (143)
T ss_dssp CSSSCEEEEEEESTTTT--CEEEEC----SSEEEESSCTT-----CSBCCCCSSCCSSSEEEEEETTEEEEEESCCSSCC
T ss_pred CCCccEEEEEEeCCCCC--eEEEeC----CCCeeccCCCC-----CCEEeCCCCcChhhEEEEEECCEEEEEECCCcCCe
Confidence 34556666655 44444 778887 88999999998 99999999999999999999999999999999999
Q ss_pred EEeCCCCceeecCCCCcEEeCCCCEEEECCCc
Q 006025 604 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 635 (664)
Q Consensus 604 ~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~ 635 (664)
||||. ++. ++.|++||+|+||...
T Consensus 111 ~VNg~-----~i~---~~~L~~GD~I~iG~~~ 134 (143)
T 2kb3_A 111 YVNRE-----PRN---AQVMQTGDEIQIGKFR 134 (143)
T ss_dssp EETTE-----ECS---EEECCTTEEEEETTEE
T ss_pred EECCE-----Ecc---eEECCCCCEEEECCEE
Confidence 99999 886 5799999999999863
No 38
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.74 E-value=3.6e-18 Score=155.42 Aligned_cols=101 Identities=21% Similarity=0.310 Sum_probs=81.5
Q ss_pred cCCcE-EEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEE--------ECCEEEEEE
Q 006025 526 MNGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY--------KDGAFYLID 596 (664)
Q Consensus 526 ~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~--------~~~~~~~~D 596 (664)
....| .|+..+++.+ +.+.|. .+..++|||+++ |||+|+++.|||.||+|.+ .++.|+|+|
T Consensus 14 ~~~~~~~L~~~~~~~g--~~~~l~---~~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~D 83 (151)
T 2jqj_A 14 EYTCLGHLVNLIPGKE--QKVEIT---NRNVTTIGRSRS-----CDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVID 83 (151)
T ss_dssp SCCEEEEEEEEETTEE--EEEEEE---CCSCEEEESSTT-----SSEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCceEEEEEecCCCc--eEEEEc---CCCeEEeCCCCC-----CCEEECCCCCccccCEEEEecccCCcCcCCEEEEEE
Confidence 33445 4445554433 777776 137899999998 9999999999999999999 778899999
Q ss_pred CCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEec
Q 006025 597 LQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIG 645 (664)
Q Consensus 597 l~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~~ 645 (664)
| |+|||||||. +|.++ ++.|++||+|+||.+. .|++....
T Consensus 84 l-S~NGT~VNg~-----~i~~~-~~~L~~GD~I~lG~~~--~~~f~~~~ 123 (151)
T 2jqj_A 84 K-SRNGTFINGN-----RLVKK-DYILKNGDRIVFGKSC--SFLFKYAS 123 (151)
T ss_dssp C-CSSCEEETTE-----ECCSS-CEEECSSEEEEETTTE--EEEEEECS
T ss_pred C-CCCCeEECCE-----EcCCC-ceECCCCCEEEECCCc--EEEEEEcC
Confidence 9 9999999999 99887 8999999999999941 25555543
No 39
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.74 E-value=3.2e-18 Score=155.60 Aligned_cols=101 Identities=22% Similarity=0.307 Sum_probs=81.4
Q ss_pred CCcEEEEecCCCCC---CCCCeEEeeccCCCCEEecCCCC----------CCCCcceeEeCCCcccccceEEEEECCE--
Q 006025 527 NGEWFLVPSGSENV---VSQPIYLSVSHENEPYLIGSESH----------EDFSRTSIVIPSAQVSKMHARISYKDGA-- 591 (664)
Q Consensus 527 ~~~~~l~~~~~~~~---~~~~~~l~~~~~~~~~~iGR~~~----------~~~~~~~i~~~~~~vSr~Ha~i~~~~~~-- 591 (664)
...|.|+....+.. .-+.+.|. .+..++|||.+. .+...|||+|+++.|||+||+|.+.++.
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~---~~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~~ 105 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 105 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECS---SCSEEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETTE
T ss_pred CCceEEEEEeCCccCcccceEEEec---CCCceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCCe
Confidence 45788888854431 22455554 355799999963 3334499999999999999999998655
Q ss_pred --EEEEECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEECCCc
Q 006025 592 --FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 635 (664)
Q Consensus 592 --~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~ 635 (664)
|+|+||+|+|||||||. +|.++.+++|++||+|+||...
T Consensus 106 ~~~~l~Dl~StNGT~VNg~-----ri~~~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 106 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCTTCCEECCTTEEEESSSCG
T ss_pred eEEEEEeCCCCCccEECCE-----EcCCCceEEcCCCCEEEECCCC
Confidence 99999999999999999 9999999999999999999754
No 40
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.73 E-value=6.6e-18 Score=154.35 Aligned_cols=104 Identities=16% Similarity=0.345 Sum_probs=84.6
Q ss_pred CCcEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEEC---------------CE
Q 006025 527 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------GA 591 (664)
Q Consensus 527 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~---------------~~ 591 (664)
++.|+.+...++....+.+.|. ....+++|||+++ |||+|+++.|||+||+|.+.+ +.
T Consensus 2 ~g~~l~L~p~~~~~~~~~i~L~--~~~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~ 74 (158)
T 1dmz_A 2 NGRFLTLKPLPDSIIQESLEIQ--QGVNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDD 74 (158)
T ss_dssp CSCCEEEEECTTSSCCCCEEET--TSCSCEEEESSTT-----SSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEE
T ss_pred CceEEEEEeCCCCccceEEEEc--CCCceEEECCCCC-----CCEEeCCCCcChHHeEEEEecCcccccccccccccccc
Confidence 3556544333333444777776 2223499999998 999999999999999999876 78
Q ss_pred EEEEECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEE-----CCCceeEEEEEEe
Q 006025 592 FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKAIFRVKVI 644 (664)
Q Consensus 592 ~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~-----g~~~~~~~~~~~~ 644 (664)
|+|+|+ |+|||||||. +|.++.+++|++||+|+| |...+. |++...
T Consensus 75 ~~l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~~l~-f~~~~~ 125 (158)
T 1dmz_A 75 IWYCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKFVIG-FKVEIN 125 (158)
T ss_dssp EEEEEC-STTCCEETTE-----ECCSSEEEECCSSCCEESCCCTTTTCCCC-EEEECS
T ss_pred EEEEEC-CcCCeEECCE-----EcCCCceEEcCCCCEEEEeecCCCCEEEE-EEEEeC
Confidence 999999 9999999999 999988999999999999 988776 877654
No 41
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.73 E-value=3.4e-18 Score=154.31 Aligned_cols=93 Identities=18% Similarity=0.285 Sum_probs=79.6
Q ss_pred hcCCcEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCc----ccccceEEEEE-CCEEEEEECCC
Q 006025 525 AMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISYK-DGAFYLIDLQS 599 (664)
Q Consensus 525 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~----vSr~Ha~i~~~-~~~~~~~Dl~S 599 (664)
+....|+|...+... ..+.|. .+..++|||.++ |||+|+++. |||+||+|.++ ++.|+|+||+|
T Consensus 13 ~~~~~w~L~~~G~~~---~~~~l~---~~~~~~IGR~~~-----~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S 81 (145)
T 2csw_A 13 AGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKS 81 (145)
T ss_dssp TCSEEEEECCTTCSC---CBEECC---TTCCEEEESSTT-----SSEECCCSSCGGGSCTTCEEEEECTTSCEEEEBSSC
T ss_pred CCCccEEEEEeCCCC---CeEEeC---CCCcEEECCCCC-----CCEEECCCCcCCCCChhHeEEEEcCCCeEEEEECCC
Confidence 456679888334332 455553 266899999998 999999998 99999999995 88899999999
Q ss_pred CceeEEeCCCCceeecCCCCcEEeCCCCEEEECC
Q 006025 600 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGS 633 (664)
Q Consensus 600 ~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~ 633 (664)
+||||||+. +|.++++++|++||+|+||.
T Consensus 82 ~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~ 110 (145)
T 2csw_A 82 LNGVWLNRA-----RLEPLRVYSIHQGDYIQLGV 110 (145)
T ss_dssp SSCEEESSC-----BCCBTCCEECCSSCCEEESC
T ss_pred CCCeEECCE-----ECCCCccEECCCCCEEEECC
Confidence 999999999 99999999999999999998
No 42
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.73 E-value=2.7e-17 Score=147.32 Aligned_cols=85 Identities=25% Similarity=0.414 Sum_probs=72.9
Q ss_pred CCeEEee-ccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECC--EEEEEECCCCceeEEeCCCCceeecCC--
Q 006025 543 QPIYLSV-SHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG--AFYLIDLQSEHGTYVTDNEGRRYRVSS-- 617 (664)
Q Consensus 543 ~~~~l~~-~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~--~~~~~Dl~S~nGt~vn~~~~~~~~l~~-- 617 (664)
+.+.|.- ...+..++|||+++ |||+|+++.|||+||+|.++++ .|+|+||+|+|||||||. ++.+
T Consensus 20 ~~~~l~~~~~~~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~-----~i~~~~ 89 (139)
T 1mzk_A 20 LQHAVNSTSSSKLPVKLGRVSP-----SDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSH-----SISHPD 89 (139)
T ss_dssp CEEEECTTCSTTCSEEEESSSS-----CSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTE-----ESSCCC
T ss_pred eEEEecCCCCccceEEeeCCCC-----CCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCE-----ECcCcc
Confidence 6777760 00123899999999 9999999999999999999964 799999999999999999 8874
Q ss_pred ------CCcEEeCCCCEEEECCCcee
Q 006025 618 ------NFPARFRPSDTIEFGSDKKA 637 (664)
Q Consensus 618 ------~~~~~l~~gd~i~~g~~~~~ 637 (664)
+.++.|++||+|+||...+.
T Consensus 90 ~~~~~~~~~~~L~~GD~I~iG~~~~~ 115 (139)
T 1mzk_A 90 LGSRKWGNPVELASDDIITLGTTTKV 115 (139)
T ss_dssp TTTCCCCCCEECCTTEEEECSSSCEE
T ss_pred cccccCCceEECCCCCEEEECCEEEE
Confidence 77899999999999998755
No 43
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.72 E-value=2e-17 Score=150.02 Aligned_cols=103 Identities=19% Similarity=0.264 Sum_probs=84.4
Q ss_pred hcCCcE-EEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCc---------ccccceEEEEECC----
Q 006025 525 AMNGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ---------VSKMHARISYKDG---- 590 (664)
Q Consensus 525 ~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~---------vSr~Ha~i~~~~~---- 590 (664)
.....| .|+..... . ..+.|. +..++|||++. ||++|+++. |||+||+|.+.++
T Consensus 25 ~~~~~w~~L~~~~~~-~--~~i~L~----~~~~~IGR~~~-----~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~ 92 (149)
T 1gxc_A 25 PTPAPWARLWALQDG-F--ANLECV----NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNS 92 (149)
T ss_dssp ----CCEEEEECSTT-C--CCEEEC----SSEEEEESSTT-----CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSS
T ss_pred CCCCeeEEEEEcCCC-C--ceEEEC----CCCEEecCCCC-----CCEEECCccccccccCCcCchhheEEEEECCCCce
Confidence 344567 55555432 2 568888 88999999998 999999985 9999999999866
Q ss_pred -EEEEEECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEec
Q 006025 591 -AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIG 645 (664)
Q Consensus 591 -~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~~ 645 (664)
.|+|+|+ |+|||||||. +|.++.++.|++||+|+||......|.+....
T Consensus 93 ~~~~i~D~-StNGT~VNg~-----~i~~~~~~~L~~GD~I~lG~~~~~~f~f~d~~ 142 (149)
T 1gxc_A 93 YIAYIEDH-SGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFFDLT 142 (149)
T ss_dssp EEEEEEEC-CSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEEETT
T ss_pred eEEEEEEC-CCCCeEECCE-----ECCCCCeEECCCCCEEEECCCCCeEEEEEECC
Confidence 8999996 9999999999 99999999999999999999765558887663
No 44
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.72 E-value=1.4e-18 Score=156.12 Aligned_cols=99 Identities=23% Similarity=0.464 Sum_probs=82.2
Q ss_pred CcEEEEecCCCCCCCCCeEEeeccCCC-CEEecCCCCCCCCcceeEeCCCcccccceEEEEEC--CEEEEEECCCCceeE
Q 006025 528 GEWFLVPSGSENVVSQPIYLSVSHENE-PYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD--GAFYLIDLQSEHGTY 604 (664)
Q Consensus 528 ~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~--~~~~~~Dl~S~nGt~ 604 (664)
..|.|..+.... ..+.+.|. .. .++|||+++. |||+|+++.|||+||+|.+++ +.|+|+||+|+||||
T Consensus 33 ~~~~L~v~~g~~-~g~~~~l~----~~~~~~IGR~~~~----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~ 103 (140)
T 2jpe_A 33 PGLHLDVVKGDK-LIEKLIID----EKKYYLFGRNPDL----CDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTF 103 (140)
T ss_dssp SSCBEEEESSSS-EEEEECCS----SCSBCCBSSCTTT----SSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEE
T ss_pred cCEEEEEEcCCC-cceEEEeC----CCCeEEecCCCcc----CCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCeE
Confidence 457666554332 22556665 64 5999999974 899999999999999999997 899999999999999
Q ss_pred EeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEE
Q 006025 605 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRV 641 (664)
Q Consensus 605 vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~ 641 (664)
|||. +|.++.++.|++||+|+||..... |++
T Consensus 104 vNg~-----~l~~~~~~~L~~gd~i~~G~~~~~-f~~ 134 (140)
T 2jpe_A 104 LGHI-----RLEPHKPQQIPIDSTVSFGASTRA-YTL 134 (140)
T ss_dssp SSSC-----EECSSSCCEECTTCCBBCSSCCCC-BCC
T ss_pred ECCE-----ECCCCccEECCCCCEEEECCceEE-EEE
Confidence 9999 999988999999999999998765 644
No 45
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.72 E-value=1.2e-17 Score=152.21 Aligned_cols=90 Identities=24% Similarity=0.397 Sum_probs=77.2
Q ss_pred CCcEEEEec-CCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEE
Q 006025 527 NGEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 605 (664)
Q Consensus 527 ~~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~v 605 (664)
...|+|+.. +...+ +.+.|. +..++|||+++ |||+|+++.|||+||+|.++++.|+|+||+|+|||||
T Consensus 53 ~~~~~L~v~~G~~~g--~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~V 121 (162)
T 2kfu_A 53 PGSALLVVKRGPNAG--SRFLLD----QAITSAGRHPD-----SDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYV 121 (162)
T ss_dssp SSCCEEEEEESTTCS--CEEETT----SSEEEEESCSS-----SSEESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEE
T ss_pred CccEEEEEEeCCCCC--eEEEEC----CCCEEECCCCC-----CCEEECCCCcChhhEEEEEECCEEEEEECCCCCCeEE
Confidence 344555444 54444 677777 88999999998 9999999999999999999999999999999999999
Q ss_pred eCCCCceeecCCCCcEEeCCCCEEEECCCc
Q 006025 606 TDNEGRRYRVSSNFPARFRPSDTIEFGSDK 635 (664)
Q Consensus 606 n~~~~~~~~l~~~~~~~l~~gd~i~~g~~~ 635 (664)
||. ++. ++.|++||+|+||...
T Consensus 122 Ng~-----~i~---~~~L~~GD~I~iG~~~ 143 (162)
T 2kfu_A 122 NRE-----PVD---SAVLANGDEVQIGKFR 143 (162)
T ss_dssp TTB-----CCS---EEECCSSCEEEETTEE
T ss_pred CCE-----Ecc---eEECCCCCEEEECCEE
Confidence 999 776 5799999999999963
No 46
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.72 E-value=7.2e-18 Score=151.72 Aligned_cols=86 Identities=22% Similarity=0.341 Sum_probs=75.1
Q ss_pred EEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEEeCCCC
Q 006025 531 FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEG 610 (664)
Q Consensus 531 ~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~vn~~~~ 610 (664)
+.+.+.++.+ +.+.|. +..++|||+++ |||+|+++.|||+||+|.++++.|+|+||+|+||||||++
T Consensus 68 l~L~v~~g~g--~~~~L~----~~~~~IGR~~~-----~dI~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~-- 134 (157)
T 3oun_A 68 VTLQLDDGSG--RTYQLR----EGSNIIGRGQD-----AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-- 134 (157)
T ss_dssp CEEEETTTTC--CEEECC----SEEEEEESSTT-----CSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE--
T ss_pred EEEEEcCCCC--eEEEEC----CCcEEEEeCCC-----CCEEeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCE--
Confidence 3344444444 778887 78899999998 9999999999999999999999999999999999999998
Q ss_pred ceeecCCCCcEEeCCCCEEEECCCc
Q 006025 611 RRYRVSSNFPARFRPSDTIEFGSDK 635 (664)
Q Consensus 611 ~~~~l~~~~~~~l~~gd~i~~g~~~ 635 (664)
+|. +++|++||+|+||...
T Consensus 135 ---~i~---~~~L~~GD~I~lG~~~ 153 (157)
T 3oun_A 135 ---PVQ---EWQLADGDVIRLGHSE 153 (157)
T ss_dssp ---ECS---EEECCTTCEEEETTEE
T ss_pred ---ECc---eEECCCCCEEEECCEE
Confidence 885 5899999999999974
No 47
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.72 E-value=1.6e-17 Score=144.44 Aligned_cols=100 Identities=24% Similarity=0.346 Sum_probs=83.0
Q ss_pred cE-EEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCC-cccccceEEEEE--CCEEEEEECCCCceeE
Q 006025 529 EW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK--DGAFYLIDLQSEHGTY 604 (664)
Q Consensus 529 ~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~~--~~~~~~~Dl~S~nGt~ 604 (664)
.| .|+++..+ ...+.+.|. +..++|||+++ |||+|++. .|||+||+|.++ ++.|+|+| +|+||||
T Consensus 3 ~wg~L~~~~~~-~~~~~~~l~----~~~~~iGR~~~-----~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~ 71 (116)
T 1lgp_A 3 PWGRLLRLGAE-EGEPHVLLR----KREWTIGRRRG-----CDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTV 71 (116)
T ss_dssp CCEEECCTTCC-SSSCCEEEC----SSEEEEESSTT-----SSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCC
T ss_pred CEEEEEEeCCC-CCccEEEEC----CCCEEECCCCC-----CCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcE
Confidence 46 45555442 223778888 89999999998 99999865 999999999997 78899999 9999999
Q ss_pred EeCCCCceeecCCCCcEEeCCCCEEEECCCc-----eeEEEEEEe
Q 006025 605 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDK-----KAIFRVKVI 644 (664)
Q Consensus 605 vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~-----~~~~~~~~~ 644 (664)
|||. +|.++++++|++||+|+||... ...|.+...
T Consensus 72 vng~-----~l~~~~~~~L~~GD~i~~G~~~~~~~~~~~f~f~~~ 111 (116)
T 1lgp_A 72 INKL-----KVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESL 111 (116)
T ss_dssp CCCC-----CCCCSSCCCCCTTCEEEEECCSSCGGGCEEEECCCS
T ss_pred ECCE-----EcCCCCcEECCCCCEEEEeccCCCCCceEEEEEEcc
Confidence 9999 9999889999999999999863 233766554
No 48
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.71 E-value=1e-17 Score=156.19 Aligned_cols=101 Identities=22% Similarity=0.304 Sum_probs=79.8
Q ss_pred CCcEEEEecCCCC---CCCCCeEEeeccCCCCEEecCCCCCC----------CCcceeEeCCCcccccceEEEEEC-C--
Q 006025 527 NGEWFLVPSGSEN---VVSQPIYLSVSHENEPYLIGSESHED----------FSRTSIVIPSAQVSKMHARISYKD-G-- 590 (664)
Q Consensus 527 ~~~~~l~~~~~~~---~~~~~~~l~~~~~~~~~~iGR~~~~~----------~~~~~i~~~~~~vSr~Ha~i~~~~-~-- 590 (664)
...|.|+....+. ...+.+.|. .+..++|||++..+ ...|||+|+++.|||+||.|.+.+ +
T Consensus 76 ~~~~~L~v~k~g~k~~~~i~~~~L~---~~s~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~ 152 (205)
T 3elv_A 76 RTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 152 (205)
T ss_dssp SCCEEEEEEEGGGCTTCCSEEEECS---SCSEEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTE
T ss_pred CCceEEEEEeCCCcccccceEEEec---CCCceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCc
Confidence 4569888885332 122455553 35789999996311 223999999999999999998873 2
Q ss_pred -EEEEEECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEECCCc
Q 006025 591 -AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 635 (664)
Q Consensus 591 -~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~ 635 (664)
.|+|+||+|+|||||||. +|.++.+++|++||+|+||...
T Consensus 153 ~~~~l~DLgStNGTfVNG~-----rI~~~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 153 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCBTSCEECCTTCEEESSSSG
T ss_pred eeEEEEeCCCCCCCeECCE-----ECCCCceeECCCCCEEEECCCC
Confidence 499999999999999999 9999889999999999999854
No 49
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.71 E-value=8e-16 Score=160.51 Aligned_cols=297 Identities=13% Similarity=0.027 Sum_probs=143.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCC-------cc-cceeeCchHHHHHHhcChhHHHHHHHhc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQ-------YR-GPIQIQSNALAALEAIDLDVAEEVMRAG 148 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~-------~~-~~~~l~~~~~~~L~~l~~g~~~~~~~~~ 148 (664)
.+||+|||||++|+++|+.|+++|++|+|+||.+.+...... .+ +...+........+.+ +.+...+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV-----KQWQAQG 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH-----HHHHHHT
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH-----HHHHhCC
Confidence 369999999999999999999999999999997532100000 00 0111222222222222 1221111
Q ss_pred cccC--ccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEc
Q 006025 149 CVTG--DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE 226 (664)
Q Consensus 149 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~ 226 (664)
.... ..+. .... + .+.. .......+........|.+.|.+ ...++++++|++++.++++|+|++.
T Consensus 77 ~~~~~~~~~~-~~~~--~----~~~~---~~~~~~~~~~~~~~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~~~v~~~ 143 (336)
T 1yvv_A 77 HVAEWTPLLY-NFHA--G----RLSP---SPDEQVRWVGKPGMSAITRAMRG---DMPVSFSCRITEVFRGEEHWNLLDA 143 (336)
T ss_dssp SEEEECCCEE-EESS--S----BCCC---CCTTSCEEEESSCTHHHHHHHHT---TCCEECSCCEEEEEECSSCEEEEET
T ss_pred Ceeeccccce-eccC--c----cccc---CCCCCccEEcCccHHHHHHHHHc---cCcEEecCEEEEEEEeCCEEEEEeC
Confidence 1100 0000 0000 0 0000 00000011111123345555544 2348899999999999999999999
Q ss_pred CCcEEe-ccEEEEecCCchhhhhhhcC------CCCccccceEEEEEEeccCCCCccccceEEEecCeeEEEEe-----e
Q 006025 227 NGQCYA-GDLLIGADGIWSKVRKNLFG------PQEAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSS-----D 294 (664)
Q Consensus 227 ~g~~i~-adlvVgADG~~S~vR~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 294 (664)
+|+.+. +|+||+|||.+|.+|..... .....|.. ++.....+. .+........+...+...+.+ +
T Consensus 144 ~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~p 220 (336)
T 1yvv_A 144 EGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDP--TWAVALAFE-TPLQTPMQGCFVQDSPLDWLARNRSKP 220 (336)
T ss_dssp TSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEE--EEEEEEEES-SCCSCCCCEEEECSSSEEEEEEGGGST
T ss_pred CCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccc--eeEEEEEec-CCCCCCCCeEEeCCCceeEEEecCcCC
Confidence 998664 99999999999999865211 12334442 222221111 111111122233333332222 2
Q ss_pred CCCCe-EEEEEEeeCC--C-CCCCCCcchHHHHHHHHhCCChhHHHHHHcCCccceeeee----cccCCCCccc-cCCcE
Q 006025 295 VGAGK-MQWYAFHKEP--A-GGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRD----IYDRTPIFTW-GRGRV 365 (664)
Q Consensus 295 ~~~~~-~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~-~~~rv 365 (664)
...+. ..|++..... . ..........+.+.+.+....... ..........+|. .+.......| ..+|+
T Consensus 221 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~---~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl 297 (336)
T 1yvv_A 221 ERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCT---MPAPVFSLAHRWLYARPAGAHEWGALSDADLGI 297 (336)
T ss_dssp TCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSC---CCCCSEEEEEEEEEEEESSCCCCSCEEETTTTE
T ss_pred CCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEccccCccCCCCCCCCCeeecCCCCE
Confidence 22222 2333332110 0 000111222233333343322100 0000001112221 1111111122 34899
Q ss_pred EEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHhhh
Q 006025 366 TLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKK 403 (664)
Q Consensus 366 ~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~~~ 403 (664)
+|+|||+|. .|++.|++|+..||+.|.+.++.
T Consensus 298 ~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 298 YVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp EECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCCCC------CCHHHHHHHHHHHHHHHHHHhhh
Confidence 999999964 49999999999999999987653
No 50
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.71 E-value=1.4e-17 Score=147.28 Aligned_cols=83 Identities=25% Similarity=0.287 Sum_probs=74.6
Q ss_pred CCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEEeCCCCceeecCCCCcEE
Q 006025 543 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 622 (664)
Q Consensus 543 ~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~ 622 (664)
+.+.|. +..++|||+++ |||+|+++.|||+||+|.++++.|+|+|++|+|||||||. ++. +++.
T Consensus 26 ~~~~l~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~-----~i~--~~~~ 89 (128)
T 1r21_A 26 PHFPLS----LSTCLFGRGIE-----CDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGS-----VID--EPVR 89 (128)
T ss_dssp EEEECC----SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTE-----ECS--SCEE
T ss_pred eEEEEC----CCCEEECCCCC-----CCEEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCE-----ECC--CcEE
Confidence 667777 88999999999 9999999999999999999999999999999999999999 886 3689
Q ss_pred eCCCCEEEECCCceeEEEEEEe
Q 006025 623 FRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 623 l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
|++||+|+||+.. |++...
T Consensus 90 L~~Gd~i~iG~~~---~~~~~~ 108 (128)
T 1r21_A 90 LKHGDVITIIDRS---FRYENE 108 (128)
T ss_dssp CCTTEEEECSSCE---EEEEEC
T ss_pred cCCCCEEEECCEE---EEEEeC
Confidence 9999999999874 555554
No 51
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.70 E-value=3.2e-17 Score=144.81 Aligned_cols=81 Identities=27% Similarity=0.415 Sum_probs=70.8
Q ss_pred CCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEE---CC--EEEEEEC-----CCCceeEEeCCCCce
Q 006025 543 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK---DG--AFYLIDL-----QSEHGTYVTDNEGRR 612 (664)
Q Consensus 543 ~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~---~~--~~~~~Dl-----~S~nGt~vn~~~~~~ 612 (664)
+.+.|. +..++|||+++ |||+|+++.|||.||+|.+. ++ .|+|+|+ +|+|||||||.
T Consensus 23 ~~~~l~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT~vNg~---- 89 (131)
T 3hx1_A 23 REVLLT----ETFYTIGRSPR-----ADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGLMINGK---- 89 (131)
T ss_dssp EEEEEC----SSEEEEESSTT-----SSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSCEEETTE----
T ss_pred EEEEEC----CCCEEECCCCC-----CCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCceEECCE----
Confidence 777777 88899999999 99999999999999999986 23 4999999 79999999999
Q ss_pred eecCCCCcEEeCCCCEEEECCCceeEEE
Q 006025 613 YRVSSNFPARFRPSDTIEFGSDKKAIFR 640 (664)
Q Consensus 613 ~~l~~~~~~~l~~gd~i~~g~~~~~~~~ 640 (664)
++.. +.|++||+|+||...+..|.
T Consensus 90 -~i~~---~~L~~GD~I~iG~~~~~~~~ 113 (131)
T 3hx1_A 90 -KVQE---HIIQTGDEIVMGPQVSVRYE 113 (131)
T ss_dssp -EESE---EECCTTCEEECSTTCEEEEE
T ss_pred -EeEe---EECCCCCEEEECCEEEEEEE
Confidence 8874 89999999999998766343
No 52
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.69 E-value=1.6e-17 Score=154.70 Aligned_cols=106 Identities=16% Similarity=0.326 Sum_probs=85.0
Q ss_pred hcCCcEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEEC---------------
Q 006025 525 AMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD--------------- 589 (664)
Q Consensus 525 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~--------------- 589 (664)
...+.|+.+...++....+.+.|. ....+++|||+++ |||+|+++.|||.||+|.+.+
T Consensus 24 ~~~g~~l~L~~~~~~~~~~~i~L~--~~~~~~~IGR~~~-----~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~~ 96 (182)
T 1qu5_A 24 KGNGRFLTLKPLPDSIIQESLEIQ--QGVNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGL 96 (182)
T ss_dssp SSSSCCEEECCCTTSSSCSCCCBT--TCCSSEEESSSTT-----SSSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCCSC
T ss_pred CCCccEEEEEeCCCCCcceEEEEc--CCCceEEECCCCC-----CCEEECCCCcChHHeEEEEecCcccccccccccccc
Confidence 344567655444343334667766 1223499999998 999999999999999999987
Q ss_pred CEEEEEECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEE-----CCCceeEEEEEEe
Q 006025 590 GAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKAIFRVKVI 644 (664)
Q Consensus 590 ~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~-----g~~~~~~~~~~~~ 644 (664)
+.|+|+|+ |+|||||||. +|.++.+++|++||+|+| |...+. |++...
T Consensus 97 ~~~~l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~~l~-f~~~~~ 149 (182)
T 1qu5_A 97 DDIWYCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKFVIG-FKVEIN 149 (182)
T ss_dssp CEEEECCC-SSSCCEETTE-----ECCSSEEEECCTTBCCEEEEEGGGTEEEE-CCEEES
T ss_pred ceEEEEEC-CcCCeEECCE-----EcCCCcceEcCCCCEEEEEEcCCCCEEEE-EEEEeC
Confidence 89999999 9999999999 999988999999999999 987655 766654
No 53
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.66 E-value=3e-16 Score=136.82 Aligned_cols=84 Identities=19% Similarity=0.300 Sum_probs=72.5
Q ss_pred CCeEEeeccCCCCEEecCC--CCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEEeCCCCceeecCCCCc
Q 006025 543 QPIYLSVSHENEPYLIGSE--SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFP 620 (664)
Q Consensus 543 ~~~~l~~~~~~~~~~iGR~--~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~ 620 (664)
+.+.|. ...++|||. ++ |||+|+++.|||+||+|.++++.|+|+|++|+|||||||+ ++. ++
T Consensus 29 ~~~~L~----~~~~~IGr~r~~~-----~di~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~-----~i~--~~ 92 (120)
T 1wln_A 29 KLYRLQ----LSVTEVGTEKFDD-----NSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQ-----RIS--ET 92 (120)
T ss_dssp CEEECC----SEEEECSSSCCST-----TCCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSC-----BCS--SC
T ss_pred EEEEEC----CCCEEECCCCCCC-----CcEEECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCE-----EcC--CC
Confidence 556666 778999974 55 9999999999999999999999999999999999999999 886 46
Q ss_pred EEeCCCCEEEECCCceeEEEEEEe
Q 006025 621 ARFRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 621 ~~l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
+.|++||+|+||... .|++..+
T Consensus 93 ~~L~~GD~I~iG~~~--~~~f~~p 114 (120)
T 1wln_A 93 TMLQSGMRLQFGTSH--VFKFVDP 114 (120)
T ss_dssp EEECTTCEEEETTTE--EEEEECS
T ss_pred EECCCCCEEEECCce--EEEEECC
Confidence 899999999999942 3666543
No 54
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.65 E-value=1.7e-16 Score=145.97 Aligned_cols=80 Identities=20% Similarity=0.321 Sum_probs=70.9
Q ss_pred CCEEecCCCCCCCCcceeEeCCC-cccccceEEEEE-CCEEEEEECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEE
Q 006025 554 EPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK-DGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF 631 (664)
Q Consensus 554 ~~~~iGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~~-~~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~ 631 (664)
..++|||+++ |||+|+++ .|||+||+|.++ ++.|+|+|+ |+|||||||. +|.++.++.|++||+|+|
T Consensus 64 ~~~~IGR~~~-----~di~l~d~~~vSr~Ha~I~~~~~g~~~l~Dl-S~NGT~vNg~-----~i~~~~~~~L~~GD~I~i 132 (164)
T 1g3g_A 64 KVWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDI-STNGTWLNGQ-----KVEKNSNQLLSQGDEITV 132 (164)
T ss_dssp EEEEEESSSS-----SSEECCCCTTTTSSCEEEEECSTTCEEEEEC-CSSCEEETTE-----EECTTEEEECCTTCEEEE
T ss_pred CcEEECCCCC-----CCEEeCCcCCcChhHEEEEECCCCCEEEEEC-CCCCeEECCE-----EcCCCCceEcCCCCEEEE
Confidence 3799999999 99999998 699999999995 899999999 9999999999 999888999999999999
Q ss_pred CCC---ceeEEEEEEe
Q 006025 632 GSD---KKAIFRVKVI 644 (664)
Q Consensus 632 g~~---~~~~~~~~~~ 644 (664)
|.. ....|.+...
T Consensus 133 G~~~~~~~~~f~~~~~ 148 (164)
T 1g3g_A 133 GVGVESDILSLVIFIN 148 (164)
T ss_dssp SCSSTTSCEEEEEEEC
T ss_pred CCCCCCCcEEEEEEeC
Confidence 995 2223666655
No 55
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.65 E-value=5.7e-16 Score=136.51 Aligned_cols=80 Identities=20% Similarity=0.322 Sum_probs=70.5
Q ss_pred CCEEecCCCCCCCCcceeEeCCC-cccccceEEEE-ECCEEEEEECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEE
Q 006025 554 EPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISY-KDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF 631 (664)
Q Consensus 554 ~~~~iGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~-~~~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~ 631 (664)
..++|||+++ |||+|+++ .|||.||+|.+ .++.|+|+|+ |+|||||||. +|.+++++.|++||+|+|
T Consensus 36 ~~~~IGR~~~-----~di~l~~~~~vSr~Ha~i~~~~~g~~~l~Dl-S~NGT~vNg~-----~l~~~~~~~L~~Gd~I~l 104 (127)
T 1g6g_A 36 KVWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDI-STNGTWLNGQ-----KVEKNSNQLLSQGDEITV 104 (127)
T ss_dssp EEEEEESSTT-----SSEECCSCTTSCSSCEEEEECTTSCEEEEEC-CSSCCEETTE-----ECCTTCCEECCTTCEEEE
T ss_pred CCEEECCCCC-----CCEEeCCCCCCChhHeEEEECCCCcEEEEEC-CcCCeEECCE-----EcCCCCeEEcCCCCEEEE
Confidence 4899999999 99999997 69999999999 4889999999 9999999999 999999999999999999
Q ss_pred CCCc---eeEEEEEEe
Q 006025 632 GSDK---KAIFRVKVI 644 (664)
Q Consensus 632 g~~~---~~~~~~~~~ 644 (664)
|... ...|.++..
T Consensus 105 G~~~~~~~i~f~~~~~ 120 (127)
T 1g6g_A 105 GVGVESDILSLVIFIN 120 (127)
T ss_dssp CTTSGGGCEEEEEEEC
T ss_pred CCCccCceEEEEEEeC
Confidence 9963 223666554
No 56
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.58 E-value=2.2e-15 Score=159.82 Aligned_cols=88 Identities=24% Similarity=0.307 Sum_probs=78.2
Q ss_pred CCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEEeCCCCceeecCCCCcEE
Q 006025 543 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 622 (664)
Q Consensus 543 ~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~ 622 (664)
+.+.|. +..++|||+++ |||+++++.|||+||+|.++++.|+|+|++|+|||||||. ++. +++.
T Consensus 299 ~~~~l~----~~~~~iGR~~~-----~di~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~--~~~~ 362 (388)
T 2ff4_A 299 RGYPLQ----AAATRIGRLHD-----NDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHE-----RIR--SAVT 362 (388)
T ss_dssp CEEECC----SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS--SEEE
T ss_pred cEEEEC----CCCEEEecCCC-----CeEEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCE-----ECC--CceE
Confidence 778888 88999999999 9999999999999999999999999999999999999999 884 5789
Q ss_pred eCCCCEEEECCCceeEEEEEEecCCCC
Q 006025 623 FRPSDTIEFGSDKKAIFRVKVIGTPPN 649 (664)
Q Consensus 623 l~~gd~i~~g~~~~~~~~~~~~~~~p~ 649 (664)
|++||+|+||+. .|+|.....+|.
T Consensus 363 L~~gd~i~~G~~---~~~~~~~~~~p~ 386 (388)
T 2ff4_A 363 LNDGDHIRICDH---EFTFQISAGTHG 386 (388)
T ss_dssp ECTTCEEEETTE---EEEEECSCCCCC
T ss_pred CCCCCEEEECCE---EEEEEeCCCCCC
Confidence 999999999996 366766655543
No 57
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.56 E-value=2e-14 Score=124.53 Aligned_cols=100 Identities=23% Similarity=0.387 Sum_probs=76.8
Q ss_pred hcCCcEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEE-CCEEEEEECCCCcee
Q 006025 525 AMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGT 603 (664)
Q Consensus 525 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~-~~~~~~~Dl~S~nGt 603 (664)
.......|+-+.++...+..+...+ +...+|||.++ |||+|+++.|||+||+|... ++.++|+|++ +|||
T Consensus 22 ~~~~~PhLvnLn~Dp~~s~~l~y~L---~~~t~IGR~~~-----~DI~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt 92 (124)
T 3fm8_A 22 VGDDKCFLVNLNADPALNELLVYYL---KEHTLIGSANS-----QDIQLCGMGILPEHCIIDITSEGQVMLTPQK-NTRT 92 (124)
T ss_dssp -----CEEEETTCCTTSSCCCEEEC---CSEEEEESSTT-----CSEECCSTTCCSSCEEEEECTTSCEEEEECT-TCCE
T ss_pred ecCCccEEEEeCCCCccCceEEEEC---CCCeEECCCCC-----CCEEECCCCeecceEEEEECCCCeEEEEECC-CCCE
Confidence 3444556777766655444443332 33589999998 99999999999999999994 8889999995 7999
Q ss_pred EEeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEE
Q 006025 604 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 642 (664)
Q Consensus 604 ~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~ 642 (664)
||||+ +|. ++++|++||+|.||... .|+|.
T Consensus 93 ~VNG~-----~V~--~~~~L~~GD~I~lG~~~--~FrFn 122 (124)
T 3fm8_A 93 FVNGS-----SVS--SPIQLHHGDRILWGNNH--FFRLN 122 (124)
T ss_dssp EETTE-----ECC--SCEEECTTCEEEETTTE--EEEEE
T ss_pred EECCE-----EcC--CcEECCCCCEEEECCCe--EEEEE
Confidence 99999 886 46899999999999864 46664
No 58
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.54 E-value=1.9e-14 Score=141.31 Aligned_cols=102 Identities=23% Similarity=0.342 Sum_probs=80.4
Q ss_pred cEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEEC-----------CEEEEEEC
Q 006025 529 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----------GAFYLIDL 597 (664)
Q Consensus 529 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~-----------~~~~~~Dl 597 (664)
.|+|...++- ..++++.|. .+.++|||....+. ++|.++|++|||+||+|.++. ..++|+||
T Consensus 1 MWiL~~~~d~-~~Gkr~~L~----pg~YlIGR~~~~~~--~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DL 73 (325)
T 3huf_A 1 MWIIEAEGDI-LKGKSRILF----PGTYIVGRNVSDDS--SHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDL 73 (325)
T ss_dssp CEEEEESTTT-TTTCCEEEC----SEEEEEESSCCCBT--TEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEEC
T ss_pred CcEEeccCcc-CCCeEEEec----CCeEEECCCCCccC--ceeecCCCCccccceEEEEecccccccccCCcceEEEEEC
Confidence 4999986542 123888888 67799999987321 356899999999999998862 37999999
Q ss_pred CCCceeEEeCCCCceeecCCCCcEEe-CCCCEEEECCCceeEEEEEEe
Q 006025 598 QSEHGTYVTDNEGRRYRVSSNFPARF-RPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 598 ~S~nGt~vn~~~~~~~~l~~~~~~~l-~~gd~i~~g~~~~~~~~~~~~ 644 (664)
+|+|||||||+ ++.+. .+.| .+||.|+||..... |+++-.
T Consensus 74 gSknGTfVNGe-----rI~~~-~~~L~~dgd~I~fG~~~~~-fRl~W~ 114 (325)
T 3huf_A 74 DTKFGTKVNEK-----VVGQN-GDSYKEKDLKIQLGKCPFT-INAYWR 114 (325)
T ss_dssp SCSSCEEETTE-----ECCTT-CEEECSSEEEEEETTCSSC-EEEEEC
T ss_pred CCCCCEEECCE-----ECCCc-eeeecCCCCEEEecCCcce-EEEEEe
Confidence 99999999999 88654 4566 47999999997766 887743
No 59
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.52 E-value=5.2e-14 Score=127.78 Aligned_cols=105 Identities=20% Similarity=0.288 Sum_probs=79.5
Q ss_pred CCcEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECC----EEEEEECCCCce
Q 006025 527 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG----AFYLIDLQSEHG 602 (664)
Q Consensus 527 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~----~~~~~Dl~S~nG 602 (664)
+....|+-+.++...+..+... .....++|||..... .|||+|+++.|||+||.|.++++ .+++.|++|+||
T Consensus 36 ~~~PhLvnLn~Dp~ls~~lvy~--L~~g~t~IGR~~~~~--~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ng 111 (154)
T 4ejq_A 36 KKTPHLVNLNEDPLMSECLLYY--IKDGITRVGREDGER--RQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGAD 111 (154)
T ss_dssp SSSCEEEECCCCTTCSSEEEEE--CCSEEEEEECSSCSS--CCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCC
T ss_pred CCCceEEEecCCcccCceEEEE--eCCCCEEEcCCCCCC--CCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCc
Confidence 3445666666665544433222 236789999986321 29999999999999999999854 588999999999
Q ss_pred eEEeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 006025 603 TYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 603 t~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
|||||. +|. +++.|++||+|.||... .|+|..+
T Consensus 112 t~VNG~-----~i~--~~~~L~~GD~I~~G~~~--~Frf~~P 144 (154)
T 4ejq_A 112 TYVNGK-----KVT--EPSILRSGNRIIMGKSH--VFRFNHP 144 (154)
T ss_dssp EEETTE-----ECC--SCEECCTTCEEEETTTE--EEEEECH
T ss_pred eEECCE-----EcC--CceECCCCCEEEECCcE--EEEEcCh
Confidence 999999 885 46899999999999864 3776543
No 60
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.45 E-value=2.3e-12 Score=136.78 Aligned_cols=194 Identities=12% Similarity=0.040 Sum_probs=102.2
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh-hhhhhcCCCCccccce
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK-VRKNLFGPQEAIYSGY 261 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~-vR~~l~~~~~~~~~~~ 261 (664)
..++...+.+.|.+.+. ...++.+++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+.+. ...+.+. .
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~-~~~~~~~-~ 235 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLG-LNNAFLP-V 235 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTT-CCCCCEE-E
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcC-CCCceec-c
Confidence 35677788888877652 235788999999998888888887777 8999999999999986 666552 1111111 1
Q ss_pred EEEEEEeccCCCCccccceEEEecCeeEEEEeeCCCCeEEEEEEeeCCCCCCCCCcchHHHHHHHHhCCChhHHHHHHcC
Q 006025 262 TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILAT 341 (664)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~ 341 (664)
.............. ....+ .... +..+..++.+.+..................+.+++.+..+.|.+.
T Consensus 236 ~g~~~~~~~~~~~~---~~~~~-~~~~--~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~------ 303 (382)
T 1ryi_A 236 KGECLSVWNDDIPL---TKTLY-HDHC--YIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQ------ 303 (382)
T ss_dssp EEEEEEEECCSSCC---CSEEE-ETTE--EEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGG------
T ss_pred ceEEEEECCCCCCc---cceEE-cCCE--EEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCcC------
Confidence 11111111111111 11122 2222 223444444333221111111111122223344444433333211
Q ss_pred Ccccee-eeecccCCCCccccCCcEEEEccCc-----CcCCCCCccchhHHHHHHHHHHHHHHH
Q 006025 342 DEEAIL-RRDIYDRTPIFTWGRGRVTLLGDSV-----HAMQPNLGQGGCMAIEDGYQLAVELEK 399 (664)
Q Consensus 342 ~~~~~~-~~~~~~~~~~~~~~~~rv~LvGDAA-----h~~~P~~GqG~n~al~Da~~La~~L~~ 399 (664)
...+. .|. ....+..++..++|++. ....++.|.|+.+|...|..|++.|..
T Consensus 304 -~~~~~~~w~-----g~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 304 -NMKVDRFWA-----GLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp -GSEEEEEEE-----EEEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred -CCceeeEEE-----EecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 11111 111 11123446677788763 345788999999999999998888753
No 61
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.41 E-value=1.1e-11 Score=132.53 Aligned_cols=64 Identities=16% Similarity=0.147 Sum_probs=48.8
Q ss_pred eeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCe-EEEEEcCCcEEeccEEEEecCCch-hhhhhh
Q 006025 186 VISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWS-KVRKNL 250 (664)
Q Consensus 186 ~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~-v~v~~~~g~~i~adlvVgADG~~S-~vR~~l 250 (664)
.++...+.+.|.+.+. ...++.+++|++++.++++ +.|++.+| +++||.||.|+|.+| .+++.+
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~ 237 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMA 237 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHc
Confidence 4556677777766542 2357889999999987665 45777777 799999999999998 677765
No 62
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.38 E-value=1.9e-13 Score=156.24 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=80.0
Q ss_pred CccccccCCCCCccccCCcccccccccccccccccccccCCCcccccccccccCCCCCC-----CCCCCCcCcEEEECCC
Q 006025 12 LSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFRTGTSGQSKNPTQMKAAVAESPTNN-----SDSENKKLRILVAGGG 86 (664)
Q Consensus 12 ~~~~~~~~~~~~~k~~~~~~~~i~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~i~g~g 86 (664)
.--.+++||+|++|+++|+.++|++|++|++|...........|. +||..++|.... ..+...++||+|||||
T Consensus 323 ~gR~~~~~P~~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~--vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG 400 (690)
T 3k30_A 323 AARPSIADPFLPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCT--QNPSMGEEWRRGWHPERIRAKESDARVLVVGAG 400 (690)
T ss_dssp ESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCS--SCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCS
T ss_pred EcHHhHhCccHHHHHHcCCccccccccchhhhhhcccCCCcccCC--cCcccCcccccccCccccCcccccceEEEECCC
Confidence 445678999999999999999999999999965554444456676 999998875431 2334567899999999
Q ss_pred HHHHHHHHHHHHcCCeEEEEccCC
Q 006025 87 IGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 87 ~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|+++|+.|+++|++|+|+|+..
T Consensus 401 ~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 401 PSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred HHHHHHHHHHHHCCCeEEEEecCC
Confidence 999999999999999999999974
No 63
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.38 E-value=2.9e-12 Score=128.60 Aligned_cols=35 Identities=34% Similarity=0.522 Sum_probs=32.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
++||+||||||+||++|+.|+++|++|+||||.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 47999999999999999999999999999999764
No 64
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.37 E-value=8.1e-12 Score=132.51 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=50.7
Q ss_pred eeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEE-EEEcCCcEEeccEEEEecCCch-hhhhhh
Q 006025 186 VISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWS-KVRKNL 250 (664)
Q Consensus 186 ~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~-v~~~~g~~i~adlvVgADG~~S-~vR~~l 250 (664)
.++...+.+.|.+.+. ...++.+++|++++.+++++. |++.+| +++||.||.|+|.+| .+.+.+
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~ 212 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMA 212 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHH
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHc
Confidence 5677788887777652 235788999999998888887 887777 899999999999998 455554
No 65
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.33 E-value=1.6e-11 Score=140.47 Aligned_cols=62 Identities=11% Similarity=0.018 Sum_probs=50.5
Q ss_pred EEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCc-EEeccEEEEecCCchh
Q 006025 184 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDLLIGADGIWSK 245 (664)
Q Consensus 184 ~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~-~i~adlvVgADG~~S~ 245 (664)
...++...+.+.|.+.+. ...++++++|++++.++++|.|++.+|+ +++||.||.|+|.+|.
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 346677888888877642 2458889999999998888999998887 8999999999999975
No 66
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.32 E-value=5.6e-11 Score=135.70 Aligned_cols=62 Identities=11% Similarity=0.062 Sum_probs=52.2
Q ss_pred EEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 184 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 184 ~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
...++...+.+.|.+.+. ...++++++|++++.++++|.|++.+|.+++||.||.|+|.+|.
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 356778888888877652 24588899999999999999999988888999999999999986
No 67
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.31 E-value=1.1e-10 Score=122.67 Aligned_cols=66 Identities=9% Similarity=0.159 Sum_probs=51.8
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCe-EEEEEcCC--cEEeccEEEEecCCch-hhhhhh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENG--QCYAGDLLIGADGIWS-KVRKNL 250 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~-v~v~~~~g--~~i~adlvVgADG~~S-~vR~~l 250 (664)
..++...+.+.|.+.+. ...++++++|++++.++++ +.|++.+| .+++||.||.|+|.+| .+.+.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred EEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 45777788888877652 2358889999999988766 88888888 4899999999999998 444444
No 68
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.29 E-value=1.4e-10 Score=123.12 Aligned_cols=60 Identities=25% Similarity=0.367 Sum_probs=47.7
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
..++...+.+.|.+.+. ...++.+++|++++.+++++.|++.+| +++||.||.|+|.+|.
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH
Confidence 35667778888877652 235788999999998888888887665 7999999999999875
No 69
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.28 E-value=4.2e-12 Score=101.87 Aligned_cols=70 Identities=17% Similarity=0.246 Sum_probs=59.5
Q ss_pred CCCEEecCCCCCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCcee-EEeCCCCceeecCCCCcEEeCCCCE---
Q 006025 553 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFRPSDT--- 628 (664)
Q Consensus 553 ~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt-~vn~~~~~~~~l~~~~~~~l~~gd~--- 628 (664)
..-+.|||++. ++++|++++||+.||.|...+++.++. . |+||| ||||+ ++ .++.|.+||.
T Consensus 20 ~~~~rIGR~~~-----~~l~LddpsVs~~HAti~~~~~G~~~l-~-S~nGtVFVNGq-----rv---~~~~I~~gDtI~g 84 (102)
T 3uv0_A 20 DTIYRIGRQKG-----LEISIADESMELAHATACILRRGVVRL-A-ALVGKIFVNDQ-----EE---TVVDIGMENAVAG 84 (102)
T ss_dssp TCCEEEESSTT-----STEECCCTTSCTTCEEEEEEETTEEEE-E-ESSSCEEETTE-----EE---SEEEECGGGCBTT
T ss_pred CcEEEEcCCCC-----CcEEECCcccccceEEEEecCCceEEE-E-eccCcEEECCE-----Ee---eeEEccCCccccc
Confidence 56799999999 999999999999999998875545542 2 99995 99999 88 4789999999
Q ss_pred ---EEECCCcee
Q 006025 629 ---IEFGSDKKA 637 (664)
Q Consensus 629 ---i~~g~~~~~ 637 (664)
++||+.+..
T Consensus 85 ~v~lrFGnvea~ 96 (102)
T 3uv0_A 85 KVKLRFGNVEAR 96 (102)
T ss_dssp EEEEEETTEEEE
T ss_pred EEEEEecCEEEE
Confidence 899997644
No 70
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.28 E-value=4.9e-10 Score=119.41 Aligned_cols=65 Identities=18% Similarity=0.207 Sum_probs=49.9
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCch-hhhhhh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS-KVRKNL 250 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S-~vR~~l 250 (664)
..++...+.+.|.+.+. ...++.+++|++++.++++++|+..+| +++||.||.|+|.+| .+++.+
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 215 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPL 215 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGG
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhc
Confidence 35666777777766542 235788999999998888888877665 799999999999984 566655
No 71
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.28 E-value=9.8e-12 Score=105.40 Aligned_cols=94 Identities=16% Similarity=0.278 Sum_probs=78.9
Q ss_pred CcEEEEec-CCCCCCCCCeEEeeccCCCCEEecCCC-CCCCCcceeEeCCCcccccceEEEEECCEEEEEECCCCceeEE
Q 006025 528 GEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 605 (664)
Q Consensus 528 ~~~~l~~~-~~~~~~~~~~~l~~~~~~~~~~iGR~~-~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~~~Dl~S~nGt~v 605 (664)
+.|-|... +...| ..+.|. ...++||+++ . |||+|.|+.|||+||+|...+++|+|+ +|+||||+
T Consensus 3 ~~~klrvlsG~~~G--~~l~L~----~~~~~IGs~~~~-----~DLvL~D~~Vs~~H~~L~~~~~g~~L~--~s~ngt~v 69 (123)
T 4a0e_A 3 GSWVCRFYQGKHRG--VEVELP----HGRCVFGSDPLQ-----SDIVLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQ 69 (123)
T ss_dssp CCEEEEECSGGGTT--CEEEEC----SEEEEEESCTTT-----CSEECCCTTSCSSCEEEEEETTEEEEE--EESSCCEE
T ss_pred ceEEEEEecCCCCC--cEEEcC----CCcEEECCCCCC-----CCEEEeCCCccceeEEEEECCCeEEEE--eccCCEEE
Confidence 46765555 43333 778888 8899999999 8 999999999999999999999999998 69999999
Q ss_pred eCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 006025 606 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 606 n~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
||. ++..+. .|.+|+.+.+|.. .|.+-..
T Consensus 70 dG~-----~v~~~~--~L~~g~~l~lG~~---~l~~~~~ 98 (123)
T 4a0e_A 70 EGL-----PVPLGT--LLRAGSCLEVGFL---LWTFVAV 98 (123)
T ss_dssp TTE-----ECCTTC--BCCTTSCEEETTE---EEEEEET
T ss_pred CCE-----Eccccc--ccCCCCEEEEccE---EEEEEcC
Confidence 999 877653 7999999999997 3665554
No 72
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.25 E-value=1.9e-12 Score=148.67 Aligned_cols=98 Identities=14% Similarity=0.106 Sum_probs=77.5
Q ss_pred CccccccCCCCCccccCCccccccccccccccccc-ccccCCCcccccccccccCCCC-----CCCCCCCCcCcEEEECC
Q 006025 12 LSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFR-TGTSGQSKNPTQMKAAVAESPT-----NNSDSENKKLRILVAGG 85 (664)
Q Consensus 12 ~~~~~~~~~~~~~k~~~~~~~~i~~c~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~i~g~ 85 (664)
....+++||+|++|+++|+.++|++|+.|++|... ........|. +||..+.+.. ....+....+||+||||
T Consensus 320 ~gR~~l~~P~~~~~~~~g~~~~~~~ci~Cn~C~~~~~~~~~~~~C~--~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGg 397 (729)
T 1o94_A 320 CARPSIADPFLPQKVEQGRYDDIRVCIGCNVCISRWEIGGPPMICT--QNATAGEEYRRGWHPEKFRQTKNKDSVLIVGA 397 (729)
T ss_dssp ESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHHSSSCCCCS--SCTTTTTHHHHCCCTTCCCCCSSCCEEEEECC
T ss_pred eCchhhcCchHHHHHHcCCccccccccccchhcccccccCCceeec--cCccccccccccccccccccccCCceEEEECC
Confidence 44567999999999999999999999999985433 2333445666 9998886531 11233455789999999
Q ss_pred CHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 86 GIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 86 g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
||+|+++|..|+++|++|+|||+.+.
T Consensus 398 GpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 398 GPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 99999999999999999999998753
No 73
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.25 E-value=3.1e-12 Score=145.86 Aligned_cols=97 Identities=14% Similarity=0.191 Sum_probs=80.3
Q ss_pred CccccccCCCCCccccCCcccccccccccccccccc-cccCCCcccccccccccCCCCCCCCCCCCcCcEEEECCCHHHH
Q 006025 12 LSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFRT-GTSGQSKNPTQMKAAVAESPTNNSDSENKKLRILVAGGGIGGL 90 (664)
Q Consensus 12 ~~~~~~~~~~~~~k~~~~~~~~i~~c~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~g~~g~ 90 (664)
..-.++++|+|++|+++|..+++++|+.|+++|... .......|. +||..+.|...+..+....+||+|||||++|+
T Consensus 309 ~gR~~l~~P~l~~k~~~g~~~~~~~c~~c~~~C~~~~~~~~~~~C~--~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl 386 (671)
T 1ps9_A 309 MARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCL--VNPRACHETKMPILPAVQKKNLAVVGAGPAGL 386 (671)
T ss_dssp ESTHHHHCTTHHHHHHTTCGGGCCCCCCCCTTTHHHHHTTCCCCCS--SCTTTTCTTTSCCCSCSSCCEEEEECCSHHHH
T ss_pred eCHHHHhCcHHHHHHHcCCCCCcccccccccccchhccCCCceEEE--eCcccccccccCCCCCCCCCeEEEECCCHHHH
Confidence 445689999999999999999999999999855433 223345566 99999888665544555678999999999999
Q ss_pred HHHHHHHHcCCeEEEEccCC
Q 006025 91 VFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 91 ~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|..|+++|++|+|+|+.+
T Consensus 387 ~aA~~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 387 AFAINAAARGHQVTLFDAHS 406 (671)
T ss_dssp HHHHHHHTTTCEEEEEESSS
T ss_pred HHHHHHHhCCCeEEEEeCCC
Confidence 99999999999999999874
No 74
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.24 E-value=2.9e-10 Score=120.20 Aligned_cols=65 Identities=17% Similarity=0.314 Sum_probs=52.2
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh-hhhhh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK-VRKNL 250 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~-vR~~l 250 (664)
..++...+.+.|.+.+. ...++.+++|++++.+++++.|++.+| +++||.||.|+|.+|. +.+.+
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHH
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHh
Confidence 46777888888877652 235788999999999888888888877 8999999999999984 55544
No 75
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.23 E-value=7.2e-10 Score=121.85 Aligned_cols=65 Identities=18% Similarity=0.213 Sum_probs=50.1
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEc---CCc--EEeccEEEEecCCchh-hhhh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLE---NGQ--CYAGDLLIGADGIWSK-VRKN 249 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~---~g~--~i~adlvVgADG~~S~-vR~~ 249 (664)
..++...|...|.+.+. ...++.+++|+++..+++.+.|++. +|+ +++||.||.|+|.+|. +++.
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~ 216 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDD 216 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHH
Confidence 35788888888877652 2357889999999988776777773 565 7999999999999986 4553
No 76
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.18 E-value=1.4e-10 Score=95.71 Aligned_cols=84 Identities=15% Similarity=0.263 Sum_probs=70.8
Q ss_pred CCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEE--CCEEEEEECCCCceeEEeCCCCceeecCCCCc
Q 006025 543 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFP 620 (664)
Q Consensus 543 ~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~ 620 (664)
.+|.|. +...++|||++. + .|.|..+||+|++|..+ ++.+.|+|+ ++|+|+|||. +|.++..
T Consensus 15 ~~I~L~---~g~~v~iGR~p~-----t--~I~DkrcSR~h~~L~~~~~~g~v~vk~l-g~Np~~vng~-----~l~k~~~ 78 (102)
T 3kt9_A 15 QRIRLP---HLEAVVIGRGPE-----T--KITDKKCSRQQVQLKAECNKGYVKVKQV-GVNPTSIDSV-----VIGKDQE 78 (102)
T ss_dssp CEEECC---BTCEEEECSSTT-----T--CCCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCEETTE-----ECCBTCE
T ss_pred CcEEcC---CCCcEEeccCCc-----c--ccccCcccCcceEEEEecCCCEEEEEEC-cCCCCeECCE-----EcCCCCe
Confidence 678887 234467899999 5 44699999999999998 567899998 5899999999 9999999
Q ss_pred EEeCCCCEEEECCCceeEEEEEE
Q 006025 621 ARFRPSDTIEFGSDKKAIFRVKV 643 (664)
Q Consensus 621 ~~l~~gd~i~~g~~~~~~~~~~~ 643 (664)
+.|++||+|.+-..... |++..
T Consensus 79 ~~L~~GD~l~Ll~~~~~-~~v~f 100 (102)
T 3kt9_A 79 VKLQPGQVLHMVNELYP-YIVEF 100 (102)
T ss_dssp EEECTTCCEEEETTEEE-EEEEE
T ss_pred EEeCCCCEEEEccCCce-EEEEe
Confidence 99999999999998655 66654
No 77
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.16 E-value=1.4e-10 Score=123.99 Aligned_cols=146 Identities=18% Similarity=0.190 Sum_probs=86.6
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccC-----CCCcc------c--c-eeeC-chHHHHHHhcCh
Q 006025 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRG-----EGQYR------G--P-IQIQ-SNALAALEAIDL 138 (664)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~-----~g~~~------~--~-~~l~-~~~~~~L~~l~~ 138 (664)
++..+||+|||||++|+++|+.|+++|++|+|+|+.+..... .+.+. . . +.-. ......+..+..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 345689999999999999999999999999999998643210 00000 0 0 0000 011222333311
Q ss_pred h-HHHHHHHhccccCccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEE
Q 006025 139 D-VAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFK 215 (664)
Q Consensus 139 g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~ 215 (664)
. ..+.+...+. .. ... ..+..+ ....+..+.+.|.+.+. ...++++++|++++
T Consensus 104 ~~~~~~~~~~Gi----~~---~~~----------------~~g~~~-~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~ 159 (417)
T 3v76_A 104 QDFVALVERHGI----GW---HEK----------------TLGQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVE 159 (417)
T ss_dssp HHHHHHHHHTTC----CE---EEC----------------STTEEE-ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEE
T ss_pred HHHHHHHHHcCC----Cc---EEe----------------eCCEEe-eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 1 1111111110 00 000 001111 12345677777766652 23588899999999
Q ss_pred eeCCeEEEEEcCCcEEeccEEEEecCCch
Q 006025 216 DHGDKVSVVLENGQCYAGDLLIGADGIWS 244 (664)
Q Consensus 216 ~~~~~v~v~~~~g~~i~adlvVgADG~~S 244 (664)
.+++++.|++.+| +++||.||.|+|.+|
T Consensus 160 ~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 160 RTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred EeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 9888999998888 899999999999999
No 78
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=99.12 E-value=4.7e-10 Score=93.42 Aligned_cols=85 Identities=11% Similarity=0.235 Sum_probs=70.1
Q ss_pred CCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEE--CCEEEEEECCCCceeEEeCCCCceeecCCCCc
Q 006025 543 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFP 620 (664)
Q Consensus 543 ~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~ 620 (664)
.+|.|. .+...++|||++. . .+.|..+||+|++|..+ ++.+.|.|+ ++|+|++||. +|.+++.
T Consensus 20 ~~I~Lp--~~~g~~viGR~p~-----t--~I~DkrcSR~hv~L~ad~~~~~v~vk~l-G~Np~~vng~-----~l~k~~~ 84 (110)
T 2brf_A 20 PPIFLP--SDGQALVLGRGPL-----T--QVTDRKCSRTQVELVADPETRTVAVKQL-GVNPSTTGTQ-----ELKPGLE 84 (110)
T ss_dssp CCEECC--STTCCEEECSBTT-----T--TBCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCEEC-C-----BCCTTCE
T ss_pred CcEEec--cCCCCEEEcCCCC-----c--ccccccceeeeEEEEEecCCCEEEEEEc-ccCCcEECCE-----EcCCCCE
Confidence 466662 2368999999998 3 57899999999999886 678999998 7799999999 9999999
Q ss_pred EEeCCCCEEEECCCceeEEEEEE
Q 006025 621 ARFRPSDTIEFGSDKKAIFRVKV 643 (664)
Q Consensus 621 ~~l~~gd~i~~g~~~~~~~~~~~ 643 (664)
+.|++||+|.|=..... |++..
T Consensus 85 ~~L~~GD~leLl~g~y~-~~v~f 106 (110)
T 2brf_A 85 GSLGVGDTLYLVNGLHP-LTLRW 106 (110)
T ss_dssp EEEETTCEEEEETTEEE-EEEEE
T ss_pred EEecCCCEEEEccCCeE-EEEEe
Confidence 99999999999766544 66655
No 79
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.12 E-value=8.5e-10 Score=111.86 Aligned_cols=138 Identities=16% Similarity=0.217 Sum_probs=85.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc-CCeEEEEccCCccccCCCCcc---cceeeCchHHHHHHhcChhHHHHHHHhcccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYR---GPIQIQSNALAALEAIDLDVAEEVMRAGCVT 151 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~~~~~~~g~~~---~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~ 151 (664)
..+||+|||||++|+++|+.|+++ |++|+|+|+.+.......... ..+.+.....+.|+.+ +..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~-----------G~~- 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI-----------GVA- 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH-----------TCC-
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc-----------CCC-
Confidence 457999999999999999999997 999999999764321110000 0111222222222222 110
Q ss_pred CccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc-C--CceEEeCCeEEEEEeeCCeE-EEEEc-
Q 006025 152 GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV-G--DEIILNESNVIDFKDHGDKV-SVVLE- 226 (664)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~-~--~~~i~~~~~v~~v~~~~~~v-~v~~~- 226 (664)
. .. .+ .+....++..+...|.+++ . ...++++++|+++..+++.+ .|.+.
T Consensus 106 ---~---~~--~~-----------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~ 160 (284)
T 1rp0_A 106 ---Y---DE--QD-----------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNW 160 (284)
T ss_dssp ---C---EE--CS-----------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEE
T ss_pred ---c---cc--CC-----------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEec
Confidence 0 00 00 0011225667777776654 2 23588899999999877755 23332
Q ss_pred --------CC-----cEEeccEEEEecCCchhhhhhh
Q 006025 227 --------NG-----QCYAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 227 --------~g-----~~i~adlvVgADG~~S~vR~~l 250 (664)
+| .+++||+||.|+|.+|.++.+.
T Consensus 161 ~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 161 ALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 32 5799999999999999988765
No 80
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.10 E-value=7.7e-11 Score=127.73 Aligned_cols=164 Identities=18% Similarity=0.203 Sum_probs=88.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccc-eeeCc--hHHHHHHhcCh--hH-HHHHHHhcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGP-IQIQS--NALAALEAIDL--DV-AEEVMRAGC 149 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~-~~l~~--~~~~~L~~l~~--g~-~~~~~~~~~ 149 (664)
..+||+|||||++|+++|+.|+++|++|+|+||.+..........++ ..+.. ..-.+++.+.. .. ...+....
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 103 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN- 103 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC-
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC-
Confidence 35899999999999999999999999999999975431100000000 00100 00112222210 00 00000000
Q ss_pred ccCccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCe-EEEEEc
Q 006025 150 VTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLE 226 (664)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~-v~v~~~ 226 (664)
....+. +.... +. .+.. ...+..+...-....+.+.|.+.+. ...++++++|+++..++++ +.|++.
T Consensus 104 -~~~~~~-~~~~~-G~---~~~~----~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~ 173 (447)
T 2i0z_A 104 -NEDIIT-FFENL-GV---KLKE----EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQ 173 (447)
T ss_dssp -HHHHHH-HHHHT-TC---CEEE----CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred -HHHHHH-HHHhc-CC---ceEE----eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEEC
Confidence 000000 00000 00 0000 0000000000124566666666542 3458889999999987777 778888
Q ss_pred CCcEEeccEEEEecCCch-----------hhhhhh
Q 006025 227 NGQCYAGDLLIGADGIWS-----------KVRKNL 250 (664)
Q Consensus 227 ~g~~i~adlvVgADG~~S-----------~vR~~l 250 (664)
+|++++||.||.|+|..| .+++.+
T Consensus 174 ~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~ 208 (447)
T 2i0z_A 174 TGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKA 208 (447)
T ss_dssp TCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHT
T ss_pred CCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHC
Confidence 888899999999999999 677666
No 81
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.10 E-value=3.9e-10 Score=123.96 Aligned_cols=58 Identities=17% Similarity=0.176 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHhc--CCceEEeCCeEEEEEeeCCeEE-EEEcCCcEEeccEEEEecCCchh
Q 006025 188 SRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 188 ~r~~l~~~L~~~~--~~~~i~~~~~v~~v~~~~~~v~-v~~~~g~~i~adlvVgADG~~S~ 245 (664)
....+.+.|.+.+ ....++++++|++++.+++++. |++.+|++++||+||.|+|++|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 3455666665543 2345889999999998877654 88899999999999999999995
No 82
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.09 E-value=8.5e-10 Score=119.22 Aligned_cols=61 Identities=10% Similarity=0.083 Sum_probs=50.6
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCC---eEEEEEeeCCeEE-EEEcCCcEEeccEEEEecCCchh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNES---NVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~---~v~~v~~~~~~v~-v~~~~g~~i~adlvVgADG~~S~ 245 (664)
..++...+.+.|.+.+. ...+++++ +|+++..++++++ |++.+|++++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 46667778888877652 24578899 9999998888888 99999989999999999999985
No 83
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.08 E-value=1.5e-09 Score=120.81 Aligned_cols=65 Identities=22% Similarity=0.264 Sum_probs=49.5
Q ss_pred eeCHHHHHHHHHHhc--CCceEEeCCeEEEEEeeCCeEE-EEEcC---C--cEEeccEEEEecCCch-hhhhhh
Q 006025 186 VISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVS-VVLEN---G--QCYAGDLLIGADGIWS-KVRKNL 250 (664)
Q Consensus 186 ~i~r~~l~~~L~~~~--~~~~i~~~~~v~~v~~~~~~v~-v~~~~---g--~~i~adlvVgADG~~S-~vR~~l 250 (664)
.++...|...|.+.+ ....++.+++|+++..+++++. |++.+ | .+++|+.||.|+|.+| .+++.+
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~ 239 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKD 239 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTT
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhc
Confidence 677788888877664 2335788999999998888753 66553 3 4799999999999999 566655
No 84
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.08 E-value=1.3e-09 Score=111.76 Aligned_cols=138 Identities=15% Similarity=0.182 Sum_probs=83.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCccccCC---CCcccceeeCchHHHHHHhcChhHHHHHHHhccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGE---GQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~---g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~ 150 (664)
..+||+|||||++|+++|+.|+++ |++|+|+|+...+..+. +.......+.+...+.|+.++ + .
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~G--v---------~ 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVG--V---------P 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHT--C---------C
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcC--C---------c
Confidence 358999999999999999999998 99999999975432110 000011223333444444331 1 0
Q ss_pred cCccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC---CceEEeCCeEEEEEeeCC--------
Q 006025 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGD-------- 219 (664)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~v~~~~~-------- 219 (664)
. . .. + .+....+..++.+.|.+.+. ...++.+++++++..+++
T Consensus 147 ~----~--~~---G-----------------~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~ 200 (344)
T 3jsk_A 147 Y----E--DE---G-----------------DYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSS 200 (344)
T ss_dssp C----E--EC---S-----------------SEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------
T ss_pred c----c--cc---C-----------------CeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccc
Confidence 0 0 00 0 01112234566666666542 345788999999876552
Q ss_pred -----------eE---EEEE----c--------CCcEEeccEEEEecCCchhhhhhh
Q 006025 220 -----------KV---SVVL----E--------NGQCYAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 220 -----------~v---~v~~----~--------~g~~i~adlvVgADG~~S~vR~~l 250 (664)
.+ .+.. . ++.+++|++||+|+|..|++++.+
T Consensus 201 ~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 201 DDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp --------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred cccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 22 2221 1 234799999999999999977665
No 85
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.06 E-value=4.3e-09 Score=114.61 Aligned_cols=56 Identities=20% Similarity=0.209 Sum_probs=47.0
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchhh
Q 006025 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 246 (664)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~v 246 (664)
.|.+.|.+.+....++++++|++|+.++++++|++.+|++++||.||.|-......
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~ 291 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAA 291 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHH
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHH
Confidence 56666777665446889999999999888999999999899999999999887643
No 86
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.04 E-value=6.1e-09 Score=112.80 Aligned_cols=66 Identities=17% Similarity=0.318 Sum_probs=49.4
Q ss_pred EEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEe---------------eCCeE-EEEEcCCcEE--eccEEEEecCCc
Q 006025 184 TRVISRMTLQQILAKAVG--DEIILNESNVIDFKD---------------HGDKV-SVVLENGQCY--AGDLLIGADGIW 243 (664)
Q Consensus 184 ~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~---------------~~~~v-~v~~~~g~~i--~adlvVgADG~~ 243 (664)
...++...+.+.|.+.+. ...++.+++|++++. +++++ .|.+.+| ++ +||.||.|+|.+
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 345677788888877652 235788999999987 55554 5777777 68 999999999999
Q ss_pred hh-hhhhh
Q 006025 244 SK-VRKNL 250 (664)
Q Consensus 244 S~-vR~~l 250 (664)
|. +.+.+
T Consensus 254 s~~l~~~~ 261 (448)
T 3axb_A 254 SNRLLNPL 261 (448)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHc
Confidence 86 55544
No 87
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.04 E-value=1e-09 Score=115.81 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=47.6
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
..++...+.+.|.+.+. ...++.+++|++++.+++++.|++.+|+ ++||.||.|+|.+|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 45667777777776642 2357889999999988888888887774 999999999999874
No 88
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.03 E-value=1.7e-09 Score=106.06 Aligned_cols=125 Identities=17% Similarity=0.202 Sum_probs=83.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcC-hhHHHHHHHhccccCcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAID-LDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~-~g~~~~~~~~~~~~~~~ 154 (664)
+.+||+|||||++|+++|+.|++.|.+|+|+|+..... | ....+.. ..+. ..+..++
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~---G-----~~~~~~~----~~~~~~~~~~~~---------- 59 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAV---M-----MPFLPPK----PPFPPGSLLERA---------- 59 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGT---T-----CCSSCCC----SCCCTTCHHHHH----------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcC---C-----cccCccc----cccchhhHHhhh----------
Confidence 35899999999999999999999999999999973211 1 0011100 0000 0000000
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC---CceEEeCCeEEEEEeeCCeE-EEEEcCCcE
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQC 230 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~v~~~~~~v-~v~~~~g~~ 230 (664)
+ + ..+ + ++..+.+.|.+.+. ...++ +++|+++..+++.+ .|.+.+|++
T Consensus 60 -----~----------d------~~g-~-----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~ 111 (232)
T 2cul_A 60 -----Y----------D------PKD-E-----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP 111 (232)
T ss_dssp -----C----------C------TTC-C-----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC
T ss_pred -----c----------c------CCC-C-----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE
Confidence 0 0 001 1 56677777776652 33455 57999999887775 577888889
Q ss_pred EeccEEEEecCCchhhhhhh
Q 006025 231 YAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 231 i~adlvVgADG~~S~vR~~l 250 (664)
++||+||.|+|.+|..+..+
T Consensus 112 i~a~~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 112 ARGEKVVLAVGSFLGARLFL 131 (232)
T ss_dssp EECSEEEECCTTCSSCEEEE
T ss_pred EECCEEEECCCCChhhceec
Confidence 99999999999999887654
No 89
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.00 E-value=6.2e-10 Score=119.57 Aligned_cols=100 Identities=19% Similarity=0.278 Sum_probs=80.3
Q ss_pred CCcE-EEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcc---------cccceEEEEE--CC---E
Q 006025 527 NGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQV---------SKMHARISYK--DG---A 591 (664)
Q Consensus 527 ~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~v---------Sr~Ha~i~~~--~~---~ 591 (664)
...| .|++...+ . ..+.|. .+.++|||+++ ||++++++.| ||+||+|.+. ++ .
T Consensus 7 ~~~~g~l~~~~~~-~--~~~~l~----~~~~~iGR~~~-----~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~ 74 (419)
T 3i6u_A 7 PAPWARLWALQDG-F--ANLECV----NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYI 74 (419)
T ss_dssp CCCSEEEEECSSS-S--CCEEEC----SSEEEEESSTT-----SSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEEC
T ss_pred CCCceEeeecCCC-C--CceEec----CCCEEecCCCc-----cCEEECCcccccccccccccccceEEEEEcCCCCceE
Confidence 3458 44444433 2 568888 89999999998 9999999876 9999999765 22 2
Q ss_pred EEEEECCCCceeEEeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 006025 592 FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 592 ~~~~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
|+|+| +|+||||||+. ++..+.+.+|.+||.|.||.+....|.+...
T Consensus 75 ~~i~D-~S~nGt~vn~~-----~~~~~~~~~l~~~d~i~~~~~~~~~~~~~~~ 121 (419)
T 3i6u_A 75 AYIED-HSGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFFDL 121 (419)
T ss_dssp CEEEE-CCSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEEES
T ss_pred EEEEE-CCcCCceECcc-----cccCCCcccCCCCCEeeeeccccceEEEecc
Confidence 99999 89999999999 9999999999999999999976555655443
No 90
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.00 E-value=2.7e-09 Score=118.27 Aligned_cols=154 Identities=16% Similarity=0.253 Sum_probs=91.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeC--chHHHHHHhcChhHHHHHHHhccccCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQ--SNALAALEAIDLDVAEEVMRAGCVTGD 153 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~--~~~~~~L~~l~~g~~~~~~~~~~~~~~ 153 (664)
..+||+|||||+||+++|+.|++.|.+|+|+|+........+. ....... ....+.++.++ +.......... .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~C-nps~ggia~~~lv~ei~alg-g~~~~~~d~~g---i 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSC-NPAIGGIGKGHLVKEVDALG-GLMAKAIDQAG---I 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS-SSEEESTTHHHHHHHHHHTT-CSHHHHHHHHE---E
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccc-cccccchhhHHHHHHHHHhc-cHHHHHhhhcc---c
Confidence 4689999999999999999999999999999987422111111 0011110 11222333332 11111111100 0
Q ss_pred cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC---CceEEeCCeEEEEEeeCCeE-EEEEcCCc
Q 006025 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQ 229 (664)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~v~~~~~~v-~v~~~~g~ 229 (664)
.+. ......+ .........+++..+.+.|.+.+. +..+ ++++|+++..+++.+ .|.+.+|.
T Consensus 102 ~f~-~l~~~kg-------------pav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~ 166 (651)
T 3ces_A 102 QFR-ILNASKG-------------PAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGL 166 (651)
T ss_dssp EEE-EESTTSC-------------GGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSE
T ss_pred chh-hhhcccC-------------cccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCC
Confidence 000 0000000 000111246788888888877653 2345 467999998777765 57788898
Q ss_pred EEeccEEEEecCCchhhhhh
Q 006025 230 CYAGDLLIGADGIWSKVRKN 249 (664)
Q Consensus 230 ~i~adlvVgADG~~S~vR~~ 249 (664)
+++||.||.|+|.+|..+..
T Consensus 167 ~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 167 KFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp EEEEEEEEECCSTTTCCEEE
T ss_pred EEECCEEEEcCCCCccCccc
Confidence 99999999999999876654
No 91
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.99 E-value=4.1e-09 Score=117.59 Aligned_cols=63 Identities=16% Similarity=0.116 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHhcC--CceEEeCCeEEEEEeeC-CeEE-EEE--cCCc--EEeccEEEEecCCchhhhhhh
Q 006025 188 SRMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVS-VVL--ENGQ--CYAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 188 ~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~-~~v~-v~~--~~g~--~i~adlvVgADG~~S~vR~~l 250 (664)
....+.+.|.+.+. ...++++++|+++..++ +.|. |.+ .+|+ +++||.||.|+|..|..++.+
T Consensus 248 ~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 35667777766542 23588899999998877 6543 444 3675 689999999999999987765
No 92
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.98 E-value=4.1e-09 Score=90.75 Aligned_cols=96 Identities=10% Similarity=0.193 Sum_probs=76.0
Q ss_pred EEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEE--CCEEEEEECCCCceeEEeC
Q 006025 530 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 607 (664)
Q Consensus 530 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~~~Dl~S~nGt~vn~ 607 (664)
..|++.... . .+|.|. .+...++|||++. . .|.|..+||+|++|..+ ++.+.|.++ ++|+|+|||
T Consensus 10 c~L~p~d~~-~--~~I~Lp--~~~g~vvIGRgPe-----t--~ItDkRcSR~qv~L~ad~~~g~V~Vk~l-G~NP~~vng 76 (143)
T 1yj5_C 10 LWLQSPTGG-P--PPIFLP--SDGQALVLGRGPL-----T--QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTVGV 76 (143)
T ss_dssp EEEECCTTS-C--CCEECC--TTTCEEEECSBTT-----T--TBCCSSSCSSCEEEEEETTTTEEEEEEC-SSSCCEETT
T ss_pred EEEEecCCC-C--CcEEec--cCCCCEEEcCCCc-----c--ccccccccceeEEEEEecCCCeEEEEEc-ccCCcEECC
Confidence 345555422 2 466662 2368999999998 3 67899999999999887 578889998 669999999
Q ss_pred CCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 006025 608 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 608 ~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
. +|.++..+.|++||+|.|=..... |++...
T Consensus 77 ~-----~L~k~~~~~L~~GD~LeLl~g~y~-f~V~f~ 107 (143)
T 1yj5_C 77 H-----ELKPGLSGSLSLGDVLYLVNGLYP-LTLRWE 107 (143)
T ss_dssp E-----ECCTTCEEEECTTCEEESSSSCSE-EEEEEE
T ss_pred E-----EecCCCEEEecCCCEEEEecCCce-EEEEec
Confidence 8 999999999999999998776555 777653
No 93
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.97 E-value=9.7e-10 Score=92.62 Aligned_cols=96 Identities=10% Similarity=0.194 Sum_probs=75.6
Q ss_pred EEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEE--CCEEEEEECCCCceeEEeC
Q 006025 530 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTD 607 (664)
Q Consensus 530 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~~~Dl~S~nGt~vn~ 607 (664)
..|.+.... . .+|.|. .+...++|||++. . .|.|..+||+|++|..+ ++.+.|.++ ++|+|+||+
T Consensus 17 c~L~~~~~~-~--~~I~Lp--~~~g~~viGRgp~-----t--~I~DkrcSR~qv~L~ad~~~~~v~vk~l-G~NP~~vng 83 (119)
T 1ujx_A 17 LWLQSPTGG-P--PPIFLP--SDGQALVLGRGPL-----T--QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTVGV 83 (119)
T ss_dssp EEEECCSSS-C--CCCCCC--TTSCCEEESBBTT-----T--TBCCTTSCTTSEEEEEETTTTEEEEEEC-SSSCCBSSS
T ss_pred EEEEeCCCC-C--CcEEec--cCCCCEEEcCCCC-----c--ccccccccceeEEEEEecCCCEEEEEEc-ccCCcEECC
Confidence 345555422 1 456662 2368999999998 3 57899999999999887 578999998 669999999
Q ss_pred CCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 006025 608 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 608 ~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
. +|.++..+.|++||+|.|=..... |++...
T Consensus 84 ~-----~l~k~~~~~L~~GD~l~Ll~g~y~-~~v~f~ 114 (119)
T 1ujx_A 84 Q-----ELKPGLSGSLSLGDVLYLVNGLYP-LTLRWS 114 (119)
T ss_dssp S-----BCCTTCEEEEETTCCCBCBTTBSC-CEEEEC
T ss_pred E-----EecCCCEEEecCCCEEEEecCCeE-EEEEec
Confidence 9 999999999999999997776544 666665
No 94
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.97 E-value=9.7e-10 Score=117.47 Aligned_cols=65 Identities=15% Similarity=0.068 Sum_probs=46.1
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEE---------EEEeeCCeEEEEEcCCcEEeccEEEEecCCch-hhhh-hh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVI---------DFKDHGDKVSVVLENGQCYAGDLLIGADGIWS-KVRK-NL 250 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~---------~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S-~vR~-~l 250 (664)
..++...+.+.|.+.+. ...++++++|+ +++.+++++.|++.+| +++||.||.|+|.+| .+++ .+
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~ 244 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGL 244 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHH
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhc
Confidence 46788888888887753 23577899999 8877777776766665 899999999999999 6777 65
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.97 E-value=3.6e-09 Score=99.31 Aligned_cols=113 Identities=26% Similarity=0.315 Sum_probs=79.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccccc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~~ 157 (664)
+||+|||||++|+.+|..|++.|.+|+|+|+.+...... ..+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~------------------------------------~~~~- 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV------------------------------------SRVP- 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC------------------------------------SCCC-
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc------------------------------------hhhh-
Confidence 689999999999999999999999999999874211000 0000
Q ss_pred cccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccE
Q 006025 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (664)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adl 235 (664)
. +. +.+ ..+....+.+.|.+.+. ...++.+ +|++++.+++++.+++++| ++++|+
T Consensus 45 ---~--------~~--------~~~--~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~ 101 (180)
T 2ywl_A 45 ---N--------YP--------GLL--DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAER 101 (180)
T ss_dssp ---C--------ST--------TCT--TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEE
T ss_pred ---c--------cC--------CCc--CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECE
Confidence 0 00 000 01223455555554431 2347778 9999998877888988888 899999
Q ss_pred EEEecCCchhhhhhh
Q 006025 236 LIGADGIWSKVRKNL 250 (664)
Q Consensus 236 vVgADG~~S~vR~~l 250 (664)
||.|+|.+|.+++.+
T Consensus 102 vI~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 102 LLLCTHKDPTLPSLL 116 (180)
T ss_dssp EEECCTTCCHHHHHH
T ss_pred EEECCCCCCCccccC
Confidence 999999999887665
No 96
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.96 E-value=2.3e-09 Score=112.06 Aligned_cols=128 Identities=17% Similarity=0.297 Sum_probs=81.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+|||||++|+++|..|+++|++|+|+|+.+... |.+. + .. +. .........
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g---g~~~-------~------~~-----~~---~~~~~~~~~ 57 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG---GAWQ-------H------AW-----HS---LHLFSPAGW 57 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS---GGGG-------G------SC-----TT---CBCSSCGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC---Cccc-------C------CC-----CC---cEecCchhh
Confidence 35799999999999999999999999999999875321 1000 0 00 00 000000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CCceEEeCCeEEEEEeeCCeEE-EEEcCCcEE
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVS-VVLENGQCY 231 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~v~~~~~~v~-v~~~~g~~i 231 (664)
. .+...... ........+..+.+.|.+.+ +. .++++++|++++.+++.+. |++.+| ++
T Consensus 58 ~------------~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~v~~~~g-~~ 119 (357)
T 4a9w_A 58 S------------SIPGWPMP----ASQGPYPARAEVLAYLAQYEQKYAL-PVLRPIRVQRVSHFGERLRVVARDGR-QW 119 (357)
T ss_dssp S------------CCSSSCCC----CCSSSSCBHHHHHHHHHHHHHHTTC-CEECSCCEEEEEEETTEEEEEETTSC-EE
T ss_pred h------------hCCCCCCC----CCccCCCCHHHHHHHHHHHHHHcCC-EEEcCCEEEEEEECCCcEEEEEeCCC-EE
Confidence 0 00000000 00011345667777666543 33 3788999999999999998 888887 89
Q ss_pred eccEEEEecCCchh
Q 006025 232 AGDLLIGADGIWSK 245 (664)
Q Consensus 232 ~adlvVgADG~~S~ 245 (664)
++|.||.|+|.+|.
T Consensus 120 ~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 120 LARAVISATGTWGE 133 (357)
T ss_dssp EEEEEEECCCSGGG
T ss_pred EeCEEEECCCCCCC
Confidence 99999999999874
No 97
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.95 E-value=3.5e-09 Score=117.33 Aligned_cols=151 Identities=18% Similarity=0.207 Sum_probs=89.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHh---cChhHHHHHHHhccccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEA---IDLDVAEEVMRAGCVTG 152 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~---l~~g~~~~~~~~~~~~~ 152 (664)
..+||+|||||+||+++|+.|++.|.+|+|+|+........+.. .... ......+++. ++ ++.........
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~-ps~g-Gia~~~lv~el~al~-g~~~~~~d~~g--- 93 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCN-PAIG-GVAKGQITREIDALG-GEMGKAIDATG--- 93 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC-SEEE-CHHHHHHHHHHHHHT-CSHHHHHHHHE---
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccc-cchh-hhhHHHHHHHHHhcc-cHHHHHHHhcC---
Confidence 45899999999999999999999999999999874221111110 0010 0011222222 22 11111111100
Q ss_pred ccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC---CceEEeCCeEEEEEeeCCeEE-EEEcCC
Q 006025 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKVS-VVLENG 228 (664)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~v~~~~~~v~-v~~~~g 228 (664)
..+. ..+...+ .........++|..+.+.|.+.+. +..++ +.+|+++..+++.+. |.+.+|
T Consensus 94 i~f~-~l~~~kg-------------pav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G 158 (641)
T 3cp8_A 94 IQFR-MLNRSKG-------------PAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSG 158 (641)
T ss_dssp EEEE-EECSSSC-------------TTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTS
T ss_pred Cchh-hcccccC-------------ccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCC
Confidence 0000 0000000 000111346788888888877663 23454 569999988888876 888899
Q ss_pred cEEeccEEEEecCCchhhh
Q 006025 229 QCYAGDLLIGADGIWSKVR 247 (664)
Q Consensus 229 ~~i~adlvVgADG~~S~vR 247 (664)
++++||.||.|+|.++..+
T Consensus 159 ~~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 159 RAIQAKAAILACGTFLNGL 177 (641)
T ss_dssp CEEEEEEEEECCTTCBTCE
T ss_pred cEEEeCEEEECcCCCCCcc
Confidence 9999999999999987644
No 98
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.95 E-value=9.7e-09 Score=114.72 Aligned_cols=62 Identities=15% Similarity=0.147 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcC--CceEEeCCeEEEEEeeC-CeEE-EEEc--CCc--EEeccEEEEecCCchhhhhhh
Q 006025 189 RMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVS-VVLE--NGQ--CYAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 189 r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~-~~v~-v~~~--~g~--~i~adlvVgADG~~S~vR~~l 250 (664)
...+.+.|.+.+. ...++++++|+++..++ +.|. |.+. +|+ +++||.||.|+|..|..++.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 4566677766542 34588999999998776 5443 4433 675 789999999999999866544
No 99
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.94 E-value=2.1e-09 Score=111.62 Aligned_cols=122 Identities=18% Similarity=0.278 Sum_probs=83.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.+.. | |.+... .....+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~-----~~~~~~ 53 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP----G---------------------GQLTAL-----YPEKYI 53 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS----C---------------------HHHHHT-----CTTSEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Ceeecc-----CCCcee
Confidence 4589999999999999999999999999999986421 1 111100 000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEec
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~a 233 (664)
. + .. +.+ .+.+..+.+.|.+.+. ...++.+++|++++.+++.++|++.+|+++++
T Consensus 54 ~---~---------~~--------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~ 110 (335)
T 2zbw_A 54 Y---D---------VA--------GFP---KVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTA 110 (335)
T ss_dssp C---C---------ST--------TCS---SEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEE
T ss_pred e---c---------cC--------CCC---CCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEe
Confidence 0 0 00 111 1334556666655442 13467799999999887788898888889999
Q ss_pred cEEEEecCCchhhhhhh
Q 006025 234 DLLIGADGIWSKVRKNL 250 (664)
Q Consensus 234 dlvVgADG~~S~vR~~l 250 (664)
|.||.|+|.+|...+..
T Consensus 111 ~~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 111 KAVIIAAGVGAFEPRRI 127 (335)
T ss_dssp EEEEECCTTSEEEECCC
T ss_pred CEEEECCCCCCCCCCCC
Confidence 99999999987655543
No 100
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.94 E-value=2.8e-09 Score=113.46 Aligned_cols=144 Identities=19% Similarity=0.198 Sum_probs=81.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCcccc-----CCCCc--cc-ce----ee--Cch-HHHHHHhcCh-h
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIR-----GEGQY--RG-PI----QI--QSN-ALAALEAIDL-D 139 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~-----~~g~~--~~-~~----~l--~~~-~~~~L~~l~~-g 139 (664)
..+||+|||||++|+++|+.|+++|++|+|+|+.+.... +.|.+ .. .. .+ .+. ....+..... .
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 458999999999999999999999999999999764311 00100 00 00 00 000 0111222210 0
Q ss_pred HHHHHHHhccccCccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEee
Q 006025 140 VAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH 217 (664)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~ 217 (664)
..+.+...+. .. ..... +..+... ....+.+.|.+.+. ...++++++|+++..+
T Consensus 83 ~~~~~~~~Gi----~~---~~~~~----------------g~~~p~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~ 138 (401)
T 2gqf_A 83 FISLVAEQGI----TY---HEKEL----------------GQLFCDE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERI 138 (401)
T ss_dssp HHHHHHHTTC----CE---EECST----------------TEEEETT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEEC
T ss_pred HHHHHHhCCC----ce---EECcC----------------CEEccCC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcc
Confidence 1111111110 00 00000 0000000 34556666655542 2357889999999876
Q ss_pred ----CCeEEEEEcCCcEEeccEEEEecCCch
Q 006025 218 ----GDKVSVVLENGQCYAGDLLIGADGIWS 244 (664)
Q Consensus 218 ----~~~v~v~~~~g~~i~adlvVgADG~~S 244 (664)
++++.|++.+| +++||.||.|+|.+|
T Consensus 139 ~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 139 QNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred cCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 56688887776 799999999999999
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.94 E-value=6.8e-09 Score=114.59 Aligned_cols=154 Identities=17% Similarity=0.250 Sum_probs=91.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCccccee-eC-chHHHHHHhcChhHHHHHHHhccccCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQ-IQ-SNALAALEAIDLDVAEEVMRAGCVTGD 153 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~-l~-~~~~~~L~~l~~g~~~~~~~~~~~~~~ 153 (664)
..+||+|||||+||+++|+.|++.|.+|+|+|+........+.. .... +. ....+.++.++ +.+........+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cn-ps~GGia~g~lv~eldalg-g~~~~~~d~~gi--- 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCN-PAIGGIAKGIVVREIDALG-GEMGKAIDQTGI--- 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSC-SEEECTTHHHHHHHHHHHT-CSHHHHHHHHEE---
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCcc-ccccccchHHHHHHHHHhh-hHHHHHhhhccc---
Confidence 35899999999999999999999999999999874211111110 0010 00 11223333332 222221111000
Q ss_pred cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC---CceEEeCCeEEEEEeeCCeE-EEEEcCCc
Q 006025 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG---DEIILNESNVIDFKDHGDKV-SVVLENGQ 229 (664)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~v~~~~~~v-~v~~~~g~ 229 (664)
.+. ..+...+ .........+++..+.+.|.+.+. +..+ ++++|+++..+++.+ .|.+.+|.
T Consensus 101 ~f~-~l~~~kG-------------pav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~ 165 (637)
T 2zxi_A 101 QFK-MLNTRKG-------------KAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGV 165 (637)
T ss_dssp EEE-EESTTSC-------------GGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSC
T ss_pred cee-ecccccC-------------ccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCc
Confidence 000 0000000 000111246788888888877653 2345 468999998877766 48888999
Q ss_pred EEeccEEEEecCCchhhhhh
Q 006025 230 CYAGDLLIGADGIWSKVRKN 249 (664)
Q Consensus 230 ~i~adlvVgADG~~S~vR~~ 249 (664)
+++|+.||.|+|..|..+..
T Consensus 166 ~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 166 EYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp EEECSEEEECCTTCBTCEEE
T ss_pred EEEeCEEEEccCCCccCcee
Confidence 99999999999998876543
No 102
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.94 E-value=2.2e-09 Score=112.75 Aligned_cols=122 Identities=16% Similarity=0.264 Sum_probs=83.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|||+.+.. | |.+... .....+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------g~~~~~-----~~~~~~ 62 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL----G---------------------GQLAAL-----YPEKHI 62 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHT-----CTTSEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC----C---------------------Cccccc-----CCCccc
Confidence 4589999999999999999999999999999986421 1 111100 000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCC-eEEEEEcCCcEEe
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~-~v~v~~~~g~~i~ 232 (664)
. + .. +.+ .+.+..+.+.|.+.+. ...++++++|++++.+++ .++|++.+|++++
T Consensus 63 ~---~---------~~--------~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 119 (360)
T 3ab1_A 63 Y---D---------VA--------GFP---EVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYR 119 (360)
T ss_dssp C---C---------ST--------TCS---SEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred c---c---------CC--------CCC---CCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEE
Confidence 0 0 00 111 1345566666655542 234778899999988765 6889998998999
Q ss_pred ccEEEEecCCchhhhhhh
Q 006025 233 GDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 233 adlvVgADG~~S~vR~~l 250 (664)
+|+||.|+|.+|..++.+
T Consensus 120 ~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 120 SRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp EEEEEECCTTCSCCBCCC
T ss_pred eeEEEEccCCCcCCCCCC
Confidence 999999999988655543
No 103
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.93 E-value=1.5e-09 Score=117.65 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=48.1
Q ss_pred eeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEeeCCeEEEEEcC---Cc---EEeccEEEEecCCchh
Q 006025 186 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLEN---GQ---CYAGDLLIGADGIWSK 245 (664)
Q Consensus 186 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~v~~~~~~v~v~~~~---g~---~i~adlvVgADG~~S~ 245 (664)
.+.+..+.+.|.+.+.. ..++++++|++++..++.++|++.+ |+ ++++|.||.|+|.+|.
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 45678888887765432 2477899999999888888888876 66 7999999999999875
No 104
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.90 E-value=1.2e-07 Score=104.04 Aligned_cols=47 Identities=19% Similarity=0.337 Sum_probs=34.9
Q ss_pred eEEeCCeEEEEEeeCCeEE-EEEcCCcEEeccEEEEecCCchhhhhhh
Q 006025 204 IILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 204 ~i~~~~~v~~v~~~~~~v~-v~~~~g~~i~adlvVgADG~~S~vR~~l 250 (664)
.|+++++|++|+.++++++ |+++||++++||.||.+-+.....++.+
T Consensus 237 ~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 237 EVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp EEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---------
T ss_pred ceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhc
Confidence 5899999999999999877 8899999999999998887777766655
No 105
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.89 E-value=5.2e-08 Score=108.63 Aligned_cols=62 Identities=19% Similarity=0.215 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhcC--CceEEeCCeEEEEEeeC-CeEE-EEEc--CCc--EEeccEEEEecCCchhhhhhh
Q 006025 189 RMTLQQILAKAVG--DEIILNESNVIDFKDHG-DKVS-VVLE--NGQ--CYAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 189 r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~-~~v~-v~~~--~g~--~i~adlvVgADG~~S~vR~~l 250 (664)
...+.+.|.+.+. ...++++++|+++..++ +.|. |.+. +|+ +++||.||.|+|..|..++.+
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 4466666666542 34588899999998765 5432 4443 664 689999999999999876655
No 106
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.88 E-value=7.6e-09 Score=105.11 Aligned_cols=110 Identities=19% Similarity=0.233 Sum_probs=76.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccccc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~~ 157 (664)
+||+|||||++|+++|..|+++|++|+|+|+...... + . . ....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~---------------------~------------~--~-~~~~ 46 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR---------------------F------------A--S-HSHG 46 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG---------------------G------------C--S-CCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc---------------------c------------c--h-hhcC
Confidence 7999999999999999999999999999998632100 0 0 0 0000
Q ss_pred cccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccE
Q 006025 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (664)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adl 235 (664)
+.. . ..+....+.+.+.+.+.. .+.+...+|++++.+++.+.|++.+|+++++|.
T Consensus 47 ~~~--------------------~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~ 103 (297)
T 3fbs_A 47 FLG--------------------Q---DGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGR 103 (297)
T ss_dssp STT--------------------C---TTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred CcC--------------------C---CCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCE
Confidence 000 0 012334555566555432 222335699999998888999999999999999
Q ss_pred EEEecCCchhh
Q 006025 236 LIGADGIWSKV 246 (664)
Q Consensus 236 vVgADG~~S~v 246 (664)
||.|+|..+..
T Consensus 104 vviAtG~~~~~ 114 (297)
T 3fbs_A 104 LILAMGVTDEL 114 (297)
T ss_dssp EEECCCCEEEC
T ss_pred EEECCCCCCCC
Confidence 99999997654
No 107
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.87 E-value=1.4e-08 Score=94.39 Aligned_cols=102 Identities=20% Similarity=0.282 Sum_probs=75.3
Q ss_pred cEEEEecCCCCCCCCCeEEeeccCCCCEEecCCCCCCCCcceeEeCCCcccccceEEEEEC-----CEEEEEECCCCcee
Q 006025 529 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----GAFYLIDLQSEHGT 603 (664)
Q Consensus 529 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~-----~~~~~~Dl~S~nGt 603 (664)
...|+-+.++...+..+.+.+ .....+|||...... +||+|..+.|+++||.|..++ +.++|.++ +.+.|
T Consensus 68 ~PhLvnLn~Dp~ls~~l~y~L--~~g~t~VGr~~~~~~--~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t 142 (184)
T 4egx_A 68 TPHLVNLNEDPLMSECLLYYI--KDGITRVGREDGERR--QDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADT 142 (184)
T ss_dssp SCEEEECCCCTTCSSCSEEEC--CSEEEEEECSSSSSC--CSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCE
T ss_pred CceEEeccCCcccCceEEEEE--CCCcCcCCCCCcCCC--CeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeE
Confidence 355666655554444433332 255689999754222 899999999999999999863 44888886 67889
Q ss_pred EEeCCCCceeecCCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 006025 604 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 644 (664)
Q Consensus 604 ~vn~~~~~~~~l~~~~~~~l~~gd~i~~g~~~~~~~~~~~~ 644 (664)
||||. +|. +++.|++||+|.||... .|+|..+
T Consensus 143 ~VNG~-----~I~--~~~~L~~GDrI~lG~~h--~Frfn~P 174 (184)
T 4egx_A 143 YVNGK-----KVT--EPSILRSGNRIIMGKSH--VFRFNHP 174 (184)
T ss_dssp EETTE-----ECC--SCEECCTTCEEEETTTE--EEEEECH
T ss_pred EEcCE-----Ecc--ccEEcCCCCEEEECCCC--EEEECCh
Confidence 99999 885 57899999999999874 4777543
No 108
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.85 E-value=3e-08 Score=101.16 Aligned_cols=138 Identities=16% Similarity=0.188 Sum_probs=81.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCccccCCC---CcccceeeCchHHHHHHhcChhHHHHHHHhccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEG---QYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g---~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~ 150 (664)
..+||+||||||+|+++|+.|+++ |++|+|+|+......... .......+.+.....|+.++ ..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~G-----------v~ 132 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELE-----------IP 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTT-----------CC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhC-----------cc
Confidence 357999999999999999999999 999999999754321110 00001112222233333221 10
Q ss_pred cCccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CCceEEeCCeEEEEEeeC----C--eE
Q 006025 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHG----D--KV 221 (664)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~v~~~~----~--~v 221 (664)
+ ... + .+....+...+...|.+++ ....++.+++|+++..++ + .+
T Consensus 133 ----~---~~~--g-----------------~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV 186 (326)
T 2gjc_A 133 ----Y---EDE--G-----------------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTV 186 (326)
T ss_dssp ----C---EEC--S-----------------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CE
T ss_pred ----c---ccC--C-----------------CeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEE
Confidence 0 000 0 1111224456677776654 234578899999998763 3 33
Q ss_pred E-EEEc--------------CCcEEec---------------cEEEEecCCchhhhhhh
Q 006025 222 S-VVLE--------------NGQCYAG---------------DLLIGADGIWSKVRKNL 250 (664)
Q Consensus 222 ~-v~~~--------------~g~~i~a---------------dlvVgADG~~S~vR~~l 250 (664)
. |... ++.++.| ++||+|+|..|++.+++
T Consensus 187 ~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 187 AGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp EEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred EEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 2 2221 3467999 99999999999988877
No 109
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.84 E-value=6.9e-09 Score=115.13 Aligned_cols=136 Identities=21% Similarity=0.153 Sum_probs=82.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+|||||++|+++|+.|++.|++|+|+|+.... | |.|. ....+....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----G---------------------G~w~----~~~~pg~~~ 65 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV----G---------------------GVWY----WNRYPGARC 65 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHH----HCCCTTCBC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Cccc----ccCCCceee
Confidence 4689999999999999999999999999999987431 1 1110 000000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHh---cCC-ceEEeCCeEEEEEeeC--CeEEEEEcCCc
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGD-EIILNESNVIDFKDHG--DKVSVVLENGQ 229 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~---~~~-~~i~~~~~v~~v~~~~--~~v~v~~~~g~ 229 (664)
+.........+... .......+ .....+.++.+.|... .+. ..++++++|++++.++ +.++|++++|+
T Consensus 66 ----d~~~~~~~~~f~~~-~~~~~~~~-~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~ 139 (542)
T 1w4x_A 66 ----DIESIEYCYSFSEE-VLQEWNWT-ERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGD 139 (542)
T ss_dssp ----SSCTTTSSCCSCHH-HHHHCCCC-BSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCC
T ss_pred ----cccccccccccChh-hhhccCcc-cccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCC
Confidence 00000000000000 00000000 0134566776666543 221 2478899999998765 36899999999
Q ss_pred EEeccEEEEecCCchhh
Q 006025 230 CYAGDLLIGADGIWSKV 246 (664)
Q Consensus 230 ~i~adlvVgADG~~S~v 246 (664)
+++||+||.|+|..|.-
T Consensus 140 ~~~ad~vV~AtG~~s~p 156 (542)
T 1w4x_A 140 RIRARYLIMASGQLSVP 156 (542)
T ss_dssp EEEEEEEEECCCSCCCC
T ss_pred EEEeCEEEECcCCCCCC
Confidence 99999999999998754
No 110
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.81 E-value=1.6e-07 Score=100.70 Aligned_cols=54 Identities=20% Similarity=0.305 Sum_probs=42.3
Q ss_pred HHHHHHHHhcCC--ceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchhh
Q 006025 191 TLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 246 (664)
Q Consensus 191 ~l~~~L~~~~~~--~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~v 246 (664)
.+.+.|.+.+.. ..++++++|++++.+++++ | ..+|++++||.||.|-|.....
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHH
Confidence 455556655422 3588999999999888888 5 5678899999999999998654
No 111
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.81 E-value=8.3e-09 Score=106.95 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=78.0
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCc
Q 006025 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (664)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~ 153 (664)
....+||+|||||++|+++|+.|+++|++|+|+|+.+......| |.+ .. ..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g---------------------g~~----~~----~~ 69 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG---------------------GQL----TT----TT 69 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT---------------------CGG----GG----SS
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC---------------------ccc----cc----ch
Confidence 34568999999999999999999999999999999652111111 000 00 00
Q ss_pred cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEc---CC
Q 006025 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLE---NG 228 (664)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~---~g 228 (664)
.. ..+. +.+ ..+.+..+...|.+.+. ...++.++ |++++.+++.+.+++. ++
T Consensus 70 ~~------------~~~~--------~~~--~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~ 126 (338)
T 3itj_A 70 EI------------ENFP--------GFP--DGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDA 126 (338)
T ss_dssp EE------------CCST--------TCT--TCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSS
T ss_pred hh------------cccC--------CCc--ccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCC
Confidence 00 0000 011 12334555555554431 23466777 9999988888888874 67
Q ss_pred cEEeccEEEEecCCchhh
Q 006025 229 QCYAGDLLIGADGIWSKV 246 (664)
Q Consensus 229 ~~i~adlvVgADG~~S~v 246 (664)
.++++|.||.|+|..+..
T Consensus 127 ~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 127 EPVTTDAIILATGASAKR 144 (338)
T ss_dssp CCEEEEEEEECCCEEECC
T ss_pred cEEEeCEEEECcCCCcCC
Confidence 789999999999997643
No 112
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.81 E-value=2.7e-08 Score=103.63 Aligned_cols=145 Identities=17% Similarity=0.167 Sum_probs=82.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCeEEEEccCCccccCCC----------Ccccc---eeeCchHHHHHHhcChhHH
Q 006025 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDMSAIRGEG----------QYRGP---IQIQSNALAALEAIDLDVA 141 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~~~~~~~g----------~~~~~---~~l~~~~~~~L~~l~~g~~ 141 (664)
+||+|||||++|+++|+.|++ +|++|+|+||......... ..+.+ +...+.....+. ...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~----~~~ 77 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQ----RFY 77 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTH----HHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHH----HHH
Confidence 489999999999999999999 9999999999753210000 00000 111121111111 112
Q ss_pred HHHHHhccccCccccccccCCCCceeeeccCCCcccccCCCeEEee--CHHHHHHHHHHhcCCceEEeCCeEEEEEeeCC
Q 006025 142 EEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVI--SRMTLQQILAKAVGDEIILNESNVIDFKDHGD 219 (664)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~ 219 (664)
+.+...+.... +.....+. ...+ + ...+.. .-..+.+.|.+.++. .++++++|++++.+++
T Consensus 78 ~~~~~~g~~~~-----~~~~~~~~--~~~~--------~-~~~~~~~~g~~~l~~~l~~~~g~-~i~~~~~V~~i~~~~~ 140 (342)
T 3qj4_A 78 DELLAYGVLRP-----LSSPIEGM--VMKE--------G-DCNFVAPQGISSIIKHYLKESGA-EVYFRHRVTQINLRDD 140 (342)
T ss_dssp HHHHHTTSCEE-----CCSCEETC--CC----------C-CEEEECTTCTTHHHHHHHHHHTC-EEESSCCEEEEEECSS
T ss_pred HHHHhCCCeec-----Cchhhcce--eccC--------C-ccceecCCCHHHHHHHHHHhcCC-EEEeCCEEEEEEEcCC
Confidence 23322222100 00000000 0000 0 000111 112455666666654 5889999999999989
Q ss_pred eEEEEEcCCcEEeccEEEEecCCc
Q 006025 220 KVSVVLENGQCYAGDLLIGADGIW 243 (664)
Q Consensus 220 ~v~v~~~~g~~i~adlvVgADG~~ 243 (664)
+|+|++.+|+++++|.||.|....
T Consensus 141 ~~~v~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 141 KWEVSKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp SEEEEESSSCCEEESEEEECSCHH
T ss_pred EEEEEECCCCEEEcCEEEECCCHH
Confidence 999999999889999999998753
No 113
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.80 E-value=5.5e-08 Score=108.80 Aligned_cols=61 Identities=15% Similarity=0.135 Sum_probs=45.4
Q ss_pred HHHHHHHHHhcC---CceEEeCCeEEEEEeeCCeEE---EE-EcCCc--EEeccEEEEecCCchhhhhhh
Q 006025 190 MTLQQILAKAVG---DEIILNESNVIDFKDHGDKVS---VV-LENGQ--CYAGDLLIGADGIWSKVRKNL 250 (664)
Q Consensus 190 ~~l~~~L~~~~~---~~~i~~~~~v~~v~~~~~~v~---v~-~~~g~--~i~adlvVgADG~~S~vR~~l 250 (664)
..+.+.|.+.+. +..++.+++|+++..+++.+. +. +.+|+ +++|+.||.|+|..|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 467777777652 245888999999988777542 22 25676 799999999999999987654
No 114
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.80 E-value=2.1e-08 Score=102.78 Aligned_cols=113 Identities=24% Similarity=0.345 Sum_probs=78.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
+||+||||||+|+++|+.|++.|+ +|+|+|+.. .|. .. .. .. .+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-----~gg---~~-~~--------------------~~-----~~~ 47 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGG---QI-TG--------------------SS-----EIE 47 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-----TTC---GG-GG--------------------CS-----CBC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-----CCc---cc-cc--------------------cc-----ccc
Confidence 699999999999999999999999 999999852 110 00 00 00 000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEecc
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~ad 234 (664)
.+. +.+ ..+.+..+.+.|.+.+. ...++. .+|++++.+++.++|++.+|+++++|
T Consensus 48 ------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~ 104 (311)
T 2q0l_A 48 ------------NYP--------GVK--EVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAK 104 (311)
T ss_dssp ------------CST--------TCC--SCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred ------------cCC--------CCc--ccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECC
Confidence 000 000 13455666666655442 223555 78999998888888888889899999
Q ss_pred EEEEecCCchhhh
Q 006025 235 LLIGADGIWSKVR 247 (664)
Q Consensus 235 lvVgADG~~S~vR 247 (664)
.||.|+|.++.+.
T Consensus 105 ~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 105 SVIIATGGSPKRT 117 (311)
T ss_dssp EEEECCCEEECCC
T ss_pred EEEECCCCCCCCC
Confidence 9999999877543
No 115
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.80 E-value=1e-07 Score=99.99 Aligned_cols=35 Identities=37% Similarity=0.675 Sum_probs=32.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+||+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 46899999999999999999999999999999975
No 116
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.80 E-value=9.6e-09 Score=113.77 Aligned_cols=136 Identities=20% Similarity=0.195 Sum_probs=81.7
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
...+||+|||||++|+++|..|++.|++|+|||+.... | |.|..- ..++..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~----G---------------------Gtw~~~----~ypg~~ 69 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV----G---------------------GVWYWN----RYPGAR 69 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHHHC----CCTTCB
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------CccccC----CCCCce
Confidence 34689999999999999999999999999999997421 1 111000 000000
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CC-ceEEeCCeEEEEEeeCC--eEEEEEcCC
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~v~~~~~--~v~v~~~~g 228 (664)
. +-........+... ........ .....+.++.+.|.+.+ +. ..++++++|++++.+++ .++|++.+|
T Consensus 70 ~----dv~s~~y~~~f~~~-~~~~~~~~-~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G 143 (549)
T 4ap3_A 70 C----DVESIDYSYSFSPE-LEQEWNWS-EKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG 143 (549)
T ss_dssp C----SSCTTTSSCCSCHH-HHHHCCCS-SSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC
T ss_pred e----CCCchhcccccccc-cccCCCCc-cCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC
Confidence 0 00000000000000 00000000 01345666666665443 33 14788999999987765 789999999
Q ss_pred cEEeccEEEEecCCchh
Q 006025 229 QCYAGDLLIGADGIWSK 245 (664)
Q Consensus 229 ~~i~adlvVgADG~~S~ 245 (664)
++++||+||.|+|..|.
T Consensus 144 ~~i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 144 DEVSARFLVVAAGPLSN 160 (549)
T ss_dssp CEEEEEEEEECCCSEEE
T ss_pred CEEEeCEEEECcCCCCC
Confidence 99999999999998764
No 117
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.79 E-value=1.1e-08 Score=112.91 Aligned_cols=136 Identities=18% Similarity=0.228 Sum_probs=83.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHH-HcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAK-RKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~-~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
..+||+|||||++|+++|..|+ +.|++|+|+|+.+.. | |.|.. . ..++..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~----G---------------------Gtw~~---~-~ypg~~ 57 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP----G---------------------GTWYW---N-RYPGAL 57 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS----C---------------------THHHH---C-CCTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC----C---------------------Ccccc---c-CCCCce
Confidence 4579999999999999999999 999999999997421 1 11100 0 000000
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CC-ceEEeCCeEEEEEeeCC--eEEEEEcCC
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHGD--KVSVVLENG 228 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~v~~~~~--~v~v~~~~g 228 (664)
.. ... ......+.. ......+.+ .....+.++.+.|.+.+ +. ..++++++|++++.+++ .++|++.+|
T Consensus 58 ~d-~~s---~~~~~~~~~-~~~~~~~~~-~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G 131 (540)
T 3gwf_A 58 SD-TES---HLYRFSFDR-DLLQESTWK-TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG 131 (540)
T ss_dssp EE-EEG---GGSSCCSCH-HHHHHCCCS-BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS
T ss_pred ec-CCc---ceeeecccc-ccccCCCCc-ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC
Confidence 00 000 000000000 000000111 12456777777765543 33 14788999999988765 789999999
Q ss_pred cEEeccEEEEecCCchhh
Q 006025 229 QCYAGDLLIGADGIWSKV 246 (664)
Q Consensus 229 ~~i~adlvVgADG~~S~v 246 (664)
++++||+||.|+|..|.-
T Consensus 132 ~~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 132 EVYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp CEEEEEEEEECCCSCCSB
T ss_pred CEEEeCEEEECCcccccC
Confidence 999999999999987743
No 118
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.77 E-value=4.2e-08 Score=114.52 Aligned_cols=62 Identities=19% Similarity=0.351 Sum_probs=48.9
Q ss_pred EeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeE-EEEEcCCcEEeccEEEEecCCchhhh
Q 006025 185 RVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDLLIGADGIWSKVR 247 (664)
Q Consensus 185 ~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v-~v~~~~g~~i~adlvVgADG~~S~vR 247 (664)
..++...+.+.|.+.+. ...++.+++|++++.+++++ .|.+.+| +++||.||.|+|.+|...
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l 210 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKI 210 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHH
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHH
Confidence 45688888888877652 23578899999999888876 4666666 799999999999998643
No 119
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.76 E-value=1e-07 Score=104.02 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=45.3
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchhh
Q 006025 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKV 246 (664)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~v 246 (664)
.|.+.|.+.+....++.+++|++|+.++++++|++.+| +++||.||.|-+.....
T Consensus 237 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~ 291 (475)
T 3lov_A 237 SLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVV 291 (475)
T ss_dssp HHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHH
T ss_pred HHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHH
Confidence 45666666665446889999999999999999999899 89999999999887543
No 120
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.76 E-value=4.3e-08 Score=100.26 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=32.1
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
+|++|||+||||||||+++|+.|++.|++|+|||+.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~ 38 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN 38 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 467899999999999999999999999999999986
No 121
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.75 E-value=2.3e-07 Score=99.43 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=43.1
Q ss_pred HHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEE-EEEcCCcEEeccEEEEecCCchhhh
Q 006025 191 TLQQILAKAVG--DEIILNESNVIDFKDHGDKVS-VVLENGQCYAGDLLIGADGIWSKVR 247 (664)
Q Consensus 191 ~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~-v~~~~g~~i~adlvVgADG~~S~vR 247 (664)
.|.+.|.+.+. ...++.+++|++|+.++++++ |++ +|++++||.||.|-|.....+
T Consensus 197 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 197 GIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHH
Confidence 45556665542 235889999999999888887 655 588999999999999887653
No 122
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.75 E-value=3.2e-08 Score=101.76 Aligned_cols=110 Identities=22% Similarity=0.314 Sum_probs=74.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+|||||++|+++|+.|+++|++|+|+|+. . .|. ... .. ..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~----gg~----~~~---------------------~~-----~~ 58 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-P----GGQ----LTE---------------------AG-----IV 58 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-T----TGG----GGG---------------------CC-----EE
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-C----CCe----ecc---------------------cc-----cc
Confidence 3579999999999999999999999999999986 1 110 000 00 00
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CCceEEeCCeEEEEEeeCCeEEEEEcCCcEEe
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~ 232 (664)
. .+. +.+ .+....+.+.|.+.+ +.. ++. .+|++++.+++.+.+++.+|++++
T Consensus 59 ~------------~~~--------~~~---~~~~~~~~~~~~~~~~~~~v~-~~~-~~v~~i~~~~~~~~v~~~~g~~~~ 113 (323)
T 3f8d_A 59 D------------DYL--------GLI---EIQASDMIKVFNKHIEKYEVP-VLL-DIVEKIENRGDEFVVKTKRKGEFK 113 (323)
T ss_dssp C------------CST--------TST---TEEHHHHHHHHHHHHHTTTCC-EEE-SCEEEEEEC--CEEEEESSSCEEE
T ss_pred c------------ccC--------CCC---CCCHHHHHHHHHHHHHHcCCE-EEE-EEEEEEEecCCEEEEEECCCCEEE
Confidence 0 000 000 123445555554433 333 555 899999988888999999989999
Q ss_pred ccEEEEecCCchh
Q 006025 233 GDLLIGADGIWSK 245 (664)
Q Consensus 233 adlvVgADG~~S~ 245 (664)
+|.||.|.|....
T Consensus 114 ~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 114 ADSVILGIGVKRR 126 (323)
T ss_dssp EEEEEECCCCEEC
T ss_pred cCEEEECcCCCCc
Confidence 9999999998843
No 123
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.74 E-value=4e-08 Score=101.46 Aligned_cols=115 Identities=21% Similarity=0.210 Sum_probs=79.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.. | |.+... .+...+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~----g---------------------G~~~~~-----~~~~~~~ 56 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQL----G---------------------GQLSAL-----YPEKYIY 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------HHHHHH-----CTTSEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC----C---------------------ceehhc-----CCCceEe
Confidence 479999999999999999999999999999987421 1 222110 0011110
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEeeCC-eEEEEEcCCcEEec
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHGD-KVSVVLENGQCYAG 233 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~v~~~~~-~v~v~~~~g~~i~a 233 (664)
+ +. +.+ .+.+..+...|.+.+.. ..++++++|++++.+++ .+.|++.+|+ +.+
T Consensus 57 ---~---------~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~ 112 (332)
T 3lzw_A 57 ---D---------VA--------GFP---KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYS 112 (332)
T ss_dssp ---C---------ST--------TCS---SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEE
T ss_pred ---c---------cC--------CCC---CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEe
Confidence 0 00 111 13455666776665532 35778999999998776 7888888886 999
Q ss_pred cEEEEecCCchh
Q 006025 234 DLLIGADGIWSK 245 (664)
Q Consensus 234 dlvVgADG~~S~ 245 (664)
|.||.|.|.+|.
T Consensus 113 d~vVlAtG~~~~ 124 (332)
T 3lzw_A 113 KTVIITAGNGAF 124 (332)
T ss_dssp EEEEECCTTSCC
T ss_pred CEEEECCCCCcC
Confidence 999999999653
No 124
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.74 E-value=1.4e-08 Score=105.19 Aligned_cols=118 Identities=21% Similarity=0.284 Sum_probs=76.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|++.|++|+|+|+........+. .+. .. ...
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg---~~~---------------------~~-----~~~ 57 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGG---QLT---------------------TT-----TDV 57 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTC---GGG---------------------GC-----SEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCc---eee---------------------ec-----ccc
Confidence 4579999999999999999999999999999983111001110 000 00 000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEec
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~a 233 (664)
. .+. +++ ..+.+..+.+.|.+.+. ...++.++ |++++.+++.++|++ +|+++++
T Consensus 58 ~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~ 113 (333)
T 1vdc_A 58 E------------NFP--------GFP--EGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILA 113 (333)
T ss_dssp C------------CST--------TCT--TCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEE
T ss_pred c------------cCC--------CCc--cCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEc
Confidence 0 000 011 12345566666655431 23466665 889988777788887 7889999
Q ss_pred cEEEEecCCchhh
Q 006025 234 DLLIGADGIWSKV 246 (664)
Q Consensus 234 dlvVgADG~~S~v 246 (664)
|.||.|+|.++..
T Consensus 114 ~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 114 DAVILAIGAVAKR 126 (333)
T ss_dssp EEEEECCCEEECC
T ss_pred CEEEECCCCCcCC
Confidence 9999999998754
No 125
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.74 E-value=1.7e-08 Score=109.71 Aligned_cols=149 Identities=20% Similarity=0.225 Sum_probs=81.4
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCe---EEEEccCCccccCCCCcccceeeCc-hHHHHHHhcChhHHHHHHHhccc
Q 006025 78 LRILVAGGGIGGLVFALAAKR---KGFE---VLVFEKDMSAIRGEGQYRGPIQIQS-NALAALEAIDLDVAEEVMRAGCV 150 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~---~g~~---~~~~~~~~~~~~~~g~~~~~~~l~~-~~~~~L~~l~~g~~~~~~~~~~~ 150 (664)
+||+||||||+|+++|..|++ .|++ |+|||+.+... |.+ .... .+ +... ++ .
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G---G~w----~~~~~~g---~~~~--g~---------~ 61 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG---GQW----NYTWRTG---LDEN--GE---------P 61 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC---GGG----SCCSCCS---BCTT--SS---------B
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC---CEe----ecCCCCC---cccc--CC---------C
Confidence 699999999999999999999 9999 99999874321 100 0000 00 0000 00 0
Q ss_pred cCccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CCc-eEEeCCeEEEEEeeCC--eEEEE
Q 006025 151 TGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDE-IILNESNVIDFKDHGD--KVSVV 224 (664)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~-~i~~~~~v~~v~~~~~--~v~v~ 224 (664)
....+..............+..+......+......+.+..+.+.|.+.+ +.. .++++++|++++..++ .++|+
T Consensus 62 ~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~ 141 (464)
T 2xve_A 62 VHSSMYRYLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVT 141 (464)
T ss_dssp CCCCCCTTCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEE
T ss_pred CcCccccchhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEE
Confidence 00000000000000000011100000000000012456777777776543 322 2778999999988766 77887
Q ss_pred EcC---C--cEEeccEEEEecCCchhhh
Q 006025 225 LEN---G--QCYAGDLLIGADGIWSKVR 247 (664)
Q Consensus 225 ~~~---g--~~i~adlvVgADG~~S~vR 247 (664)
+.+ | .++.+|.||.|+|.+|.-+
T Consensus 142 ~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 142 VQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred EEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 765 4 5789999999999876544
No 126
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.71 E-value=1.9e-08 Score=111.31 Aligned_cols=136 Identities=19% Similarity=0.143 Sum_probs=80.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+|||||++|+++|+.|++.|++|+|||+.+.. | |.|. ....++...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~----G---------------------Gtw~----~~~yPg~~~ 58 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV----G---------------------GTWY----WNRYPGCRL 58 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS----C---------------------THHH----HCCCTTCBC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC----C---------------------Cccc----cCCCCceee
Confidence 4579999999999999999999999999999997421 1 0110 000000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CC-ceEEeCCeEEEEEeeC--CeEEEEEcCCc
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GD-EIILNESNVIDFKDHG--DKVSVVLENGQ 229 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~-~~i~~~~~v~~v~~~~--~~v~v~~~~g~ 229 (664)
. .........+.... ....... .....+.++.+.|.+.+ +. ..++++++|++++.++ +.|+|++++|+
T Consensus 59 d----~~~~~y~~~f~~~~-~~~~~~~-~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~ 132 (545)
T 3uox_A 59 D----TESYAYGYFALKGI-IPEWEWS-ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEE 132 (545)
T ss_dssp S----SCHHHHCHHHHTTS-STTCCCS-BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTE
T ss_pred c----CchhhcccccCccc-ccCCCcc-ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCC
Confidence 0 00000000000000 0000000 01234566666554432 32 2478899999998654 47899999999
Q ss_pred EEeccEEEEecCCchhh
Q 006025 230 CYAGDLLIGADGIWSKV 246 (664)
Q Consensus 230 ~i~adlvVgADG~~S~v 246 (664)
+++||+||.|+|..|.-
T Consensus 133 ~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 133 VVTCRFLISATGPLSAS 149 (545)
T ss_dssp EEEEEEEEECCCSCBC-
T ss_pred EEEeCEEEECcCCCCCC
Confidence 99999999999987643
No 127
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.70 E-value=5.6e-08 Score=100.00 Aligned_cols=112 Identities=21% Similarity=0.347 Sum_probs=73.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. ..... . .+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~---------------------~-----~~ 60 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-----AGG---LTAEA---------------------P-----LV 60 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-----TTG---GGGGC---------------------S-----CB
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-----CCc---ccccc---------------------c-----hh
Confidence 45899999999999999999999999999999842 110 00000 0 00
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeCCeEEEEEcCCcEEec
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~a 233 (664)
. .+. ++ ..+.+..+.+.|.+.+. ...++. .+|++++.+++.++|.. +++++++
T Consensus 61 ~------------~~~--------~~---~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~ 115 (319)
T 3cty_A 61 E------------NYL--------GF---KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHA 115 (319)
T ss_dssp C------------CBT--------TB---SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEE
T ss_pred h------------hcC--------CC---cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEe
Confidence 0 000 00 01234455555544432 223555 78999988888787776 6678999
Q ss_pred cEEEEecCCchhh
Q 006025 234 DLLIGADGIWSKV 246 (664)
Q Consensus 234 dlvVgADG~~S~v 246 (664)
|+||.|+|.++..
T Consensus 116 ~~li~AtG~~~~~ 128 (319)
T 3cty_A 116 KYVIITTGTTHKH 128 (319)
T ss_dssp EEEEECCCEEECC
T ss_pred CEEEECCCCCccc
Confidence 9999999987643
No 128
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.68 E-value=7.1e-08 Score=99.54 Aligned_cols=112 Identities=24% Similarity=0.370 Sum_probs=73.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. ..... . .+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~---------------------~-----~~ 52 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-----PGG---QIAWS---------------------E-----EV 52 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-----TTG---GGGGC---------------------S-----CB
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-----CCc---ccccc---------------------c-----cc
Confidence 45899999999999999999999999999999862 111 00000 0 00
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CCceEEeCCeEEEEEee--CCe-EEEEEcCCc
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDH--GDK-VSVVLENGQ 229 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~v~~~--~~~-v~v~~~~g~ 229 (664)
. .+. +++ ..+.+..+.+.|.+.+ +. .++. .+|++++.+ ++. ++|.+.+|+
T Consensus 53 ~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~gv-~~~~-~~v~~i~~~~~~~~~~~v~~~~g~ 108 (325)
T 2q7v_A 53 E------------NFP--------GFP--EPIAGMELAQRMHQQAEKFGA-KVEM-DEVQGVQHDATSHPYPFTVRGYNG 108 (325)
T ss_dssp C------------CST--------TCS--SCBCHHHHHHHHHHHHHHTTC-EEEE-CCEEEEEECTTSSSCCEEEEESSC
T ss_pred c------------cCC--------CCC--CCCCHHHHHHHHHHHHHHcCC-EEEe-eeEEEEEeccCCCceEEEEECCCC
Confidence 0 000 000 0133445555554433 33 3554 689999876 444 777788888
Q ss_pred EEeccEEEEecCCchh
Q 006025 230 CYAGDLLIGADGIWSK 245 (664)
Q Consensus 230 ~i~adlvVgADG~~S~ 245 (664)
++++|.||.|+|.++.
T Consensus 109 ~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 109 EYRAKAVILATGADPR 124 (325)
T ss_dssp EEEEEEEEECCCEEEC
T ss_pred EEEeCEEEECcCCCcC
Confidence 9999999999998764
No 129
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.66 E-value=1.2e-07 Score=99.00 Aligned_cols=34 Identities=26% Similarity=0.569 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC------CeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG------FEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g------~~~~~~~~~~~ 111 (664)
+||+|||||++|+++|+.|+++| ++|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 99999999853
No 130
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.65 E-value=1.3e-07 Score=102.89 Aligned_cols=148 Identities=16% Similarity=0.162 Sum_probs=79.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcC-----CeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKG-----FEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCV 150 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g-----~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~ 150 (664)
..+||+||||||+|+++|..|+++| ++|+|||+.+......+.......++.. .++.+. .....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~---~~~~l~--------~~~~p 97 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQIS---FLKDLV--------SLRNP 97 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSC---TTSSSS--------TTTCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcc---hhhccc--------cccCC
Confidence 4579999999999999999999999 9999999986422111100000000000 000000 00000
Q ss_pred c-CccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEee---CCe--EE
Q 006025 151 T-GDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDH---GDK--VS 222 (664)
Q Consensus 151 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~v~~~---~~~--v~ 222 (664)
. ...+..+.... +. ...+ .... .....+..+.+.|...+.. ..++++++|++++.+ ++. ++
T Consensus 98 ~~~~~~~~~l~~~-~~-~~~~------~~~~---~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~ 166 (463)
T 3s5w_A 98 TSPYSFVNYLHKH-DR-LVDF------INLG---TFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALR 166 (463)
T ss_dssp TCTTSHHHHHHHT-TC-HHHH------HHHC---CSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEE
T ss_pred CCCCChhHhhhhc-Cc-eeec------cccc---CCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEE
Confidence 0 00000000000 00 0000 0000 0134567777777655432 247889999999876 333 46
Q ss_pred EEEcCCc----EEeccEEEEecCCchh
Q 006025 223 VVLENGQ----CYAGDLLIGADGIWSK 245 (664)
Q Consensus 223 v~~~~g~----~i~adlvVgADG~~S~ 245 (664)
|++.+|+ +++||.||.|+|....
T Consensus 167 V~~~~g~g~~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 167 VISRNADGEELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp EEEEETTSCEEEEEESEEEECCCCEEC
T ss_pred EEEecCCCceEEEEeCEEEECCCCCCC
Confidence 7777765 8999999999998443
No 131
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.64 E-value=8.5e-08 Score=105.97 Aligned_cols=35 Identities=29% Similarity=0.471 Sum_probs=32.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+||+|||||++||++|+.|++ |.+|+|+||...
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 45899999999999999999999 999999999754
No 132
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.63 E-value=7e-07 Score=99.37 Aligned_cols=35 Identities=31% Similarity=0.505 Sum_probs=32.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+||+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35899999999999999999999999999999975
No 133
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.62 E-value=5.2e-07 Score=99.20 Aligned_cols=37 Identities=35% Similarity=0.592 Sum_probs=34.1
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...+||+|||+|++||++|+.|+++|++|+|+||.+.
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~ 75 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSG 75 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3468999999999999999999999999999999864
No 134
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.61 E-value=9.7e-08 Score=98.99 Aligned_cols=114 Identities=21% Similarity=0.219 Sum_probs=73.6
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
+..+||+||||||+|+++|+.|++.|++|+|+|+.. .|. .+... ..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~~~--------------------------~~ 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGG---ALMTT--------------------------TD 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSC---GGGSC--------------------------SC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCC---ceecc--------------------------ch
Confidence 346899999999999999999999999999999641 110 00000 00
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc--CCceEEeCCeEEEEEeeCCeEEE-EEcCCcEE
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSV-VLENGQCY 231 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~v~~~~~~v~v-~~~~g~~i 231 (664)
.. .+. +++ ..+.+..+.+.|.+.+ ....++.++ |++++. ++.++| .+.+|+++
T Consensus 58 ~~------------~~~--------~~~--~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~ 113 (335)
T 2a87_A 58 VE------------NYP--------GFR--NGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTH 113 (335)
T ss_dssp BC------------CST--------TCT--TCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEE
T ss_pred hh------------hcC--------CCC--CCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEE
Confidence 00 000 000 0133445555554432 123466665 888887 556777 77888899
Q ss_pred eccEEEEecCCchhh
Q 006025 232 AGDLLIGADGIWSKV 246 (664)
Q Consensus 232 ~adlvVgADG~~S~v 246 (664)
++|.||.|+|.++..
T Consensus 114 ~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 114 RARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEEECCCEEECC
T ss_pred EeCEEEECCCCCccC
Confidence 999999999997643
No 135
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.61 E-value=3.8e-07 Score=99.12 Aligned_cols=31 Identities=35% Similarity=0.571 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
||+|||||++|+++|+.|++.|++|+|+||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999997
No 136
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.61 E-value=1.6e-07 Score=98.67 Aligned_cols=138 Identities=20% Similarity=0.285 Sum_probs=77.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
..+||+|||||++|+++|..|++.|+ +|+|||+.. .|. .....+.... .+ .... ...
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-----~Gg---~~~~~~~~~~---~~---------~~~~--~~~ 60 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-----VGH---SFKHWPKSTR---TI---------TPSF--TSN 60 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-----TTH---HHHTSCTTCB---CS---------SCCC--CCG
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-----CCC---ccccCccccc---cc---------Ccch--hcc
Confidence 35799999999999999999999999 999999874 110 0000000000 00 0000 000
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHh---cCCceEEeCCeEEEEEeeCCeEEEEEcCCcEE
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKA---VGDEIILNESNVIDFKDHGDKVSVVLENGQCY 231 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~---~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i 231 (664)
...+.+... ..... .+..... ...+.+..+.+.|.+. .+. .++.+++|++++.+++.+.|...++ ++
T Consensus 61 ~~g~~~~~~----~~~~~-~~~~~~~---~~~~~~~~~~~~l~~~~~~~gv-~i~~~~~v~~i~~~~~~~~v~~~~g-~~ 130 (369)
T 3d1c_A 61 GFGMPDMNA----ISMDT-SPAFTFN---EEHISGETYAEYLQVVANHYEL-NIFENTVVTNISADDAYYTIATTTE-TY 130 (369)
T ss_dssp GGTCCCTTC----SSTTC-CHHHHHC---CSSCBHHHHHHHHHHHHHHTTC-EEECSCCEEEEEECSSSEEEEESSC-CE
T ss_pred cCCchhhhh----ccccc-ccccccc---ccCCCHHHHHHHHHHHHHHcCC-eEEeCCEEEEEEECCCeEEEEeCCC-EE
Confidence 000000000 00000 0000000 0123455555555433 333 4778999999998777888888776 69
Q ss_pred eccEEEEecCCchh
Q 006025 232 AGDLLIGADGIWSK 245 (664)
Q Consensus 232 ~adlvVgADG~~S~ 245 (664)
.+|.||.|.|..+.
T Consensus 131 ~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 131 HADYIFVATGDYNF 144 (369)
T ss_dssp EEEEEEECCCSTTS
T ss_pred EeCEEEECCCCCCc
Confidence 99999999999763
No 137
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.60 E-value=1e-07 Score=97.99 Aligned_cols=113 Identities=17% Similarity=0.245 Sum_probs=73.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.. .|. .+. . .. ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg---~~~-----------~----------~~-----~~ 49 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-----KGG---QLT-----------T----------TT-----EV 49 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-----TTG---GGG-----------G----------CS-----BC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-----CCc---eEe-----------c----------ch-----hh
Confidence 45799999999999999999999999999999641 110 000 0 00 00
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc--CCceEEeCCeEEEEEeeCCeEEEEEcCCcEEec
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~a 233 (664)
. . +. +++ ..+.+..+.+.+.+.+ ....++.++ +++++.+++.+++ +.+++++++
T Consensus 50 ~----~--------~~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~ 105 (320)
T 1trb_A 50 E----N--------WP--------GDP--NDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTC 105 (320)
T ss_dssp C----C--------ST--------TCC--SSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEE
T ss_pred h----h--------CC--------CCC--CCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEc
Confidence 0 0 00 000 0123445554444332 123466665 8899887778887 678889999
Q ss_pred cEEEEecCCchhh
Q 006025 234 DLLIGADGIWSKV 246 (664)
Q Consensus 234 dlvVgADG~~S~v 246 (664)
|.||.|+|.++..
T Consensus 106 ~~lv~AtG~~~~~ 118 (320)
T 1trb_A 106 DALIIATGASARY 118 (320)
T ss_dssp EEEEECCCEEECC
T ss_pred CEEEECCCCCcCC
Confidence 9999999987643
No 138
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.60 E-value=1.3e-07 Score=96.63 Aligned_cols=111 Identities=19% Similarity=0.296 Sum_probs=74.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccccc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~~ 157 (664)
+||+||||||+|+++|+.|+++|++|+|+|+.. .|. . .. .. .+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-----gG~----~-~~--------~~-----------------~~~~ 46 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-----GGQ----I-LD--------TV-----------------DIEN 46 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-----TGG----G-GG--------CC-----------------EECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-----Cce----e-cc--------cc-----------------cccc
Confidence 699999999999999999999999999998531 110 0 00 00 0000
Q ss_pred cccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEeeC---CeEEEEEcCCcEEe
Q 006025 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDHG---DKVSVVLENGQCYA 232 (664)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~~---~~v~v~~~~g~~i~ 232 (664)
+. +.+ ...+..+.+.|.+.+. ...++.+++|+.++.+. +.+.|++++|++++
T Consensus 47 ~~--------------------~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~ 103 (310)
T 1fl2_A 47 YI--------------------SVP---KTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLK 103 (310)
T ss_dssp BT--------------------TBS---SEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEE
T ss_pred cc--------------------CcC---CCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEE
Confidence 00 000 1234455555544432 23477788999997653 36888888998999
Q ss_pred ccEEEEecCCchhh
Q 006025 233 GDLLIGADGIWSKV 246 (664)
Q Consensus 233 adlvVgADG~~S~v 246 (664)
+|.||.|+|.++..
T Consensus 104 ~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 104 ARSIIVATGAKWRN 117 (310)
T ss_dssp EEEEEECCCEEECC
T ss_pred eCEEEECcCCCcCC
Confidence 99999999997643
No 139
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.55 E-value=3.3e-07 Score=93.79 Aligned_cols=117 Identities=17% Similarity=0.163 Sum_probs=71.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..|||+||||||||+++|+.|+++|++|+|+|+........+ |. ......+
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~---------------------G~--------~~~~~~i 53 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG---------------------GQ--------LTTTTII 53 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT---------------------CG--------GGGSSEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC---------------------CC--------cCChHHh
Confidence 358999999999999999999999999999998642110000 00 0000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc--CCceEEeCCeEEEEEeeCCeEEEEEcCCcEEec
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV--GDEIILNESNVIDFKDHGDKVSVVLENGQCYAG 233 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~--~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~a 233 (664)
. .+. +++. .+...+|...+.+.+ ....+ ....+.......+...+...++.++++
T Consensus 54 ~------------~~~--------g~~~--~i~~~~l~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ 110 (314)
T 4a5l_A 54 E------------NFP--------GFPN--GIDGNELMMNMRTQSEKYGTTI-ITETIDHVDFSTQPFKLFTEEGKEVLT 110 (314)
T ss_dssp C------------CST--------TCTT--CEEHHHHHHHHHHHHHHTTCEE-ECCCEEEEECSSSSEEEEETTCCEEEE
T ss_pred h------------hcc--------CCcc--cCCHHHHHHHHHHHHhhcCcEE-EEeEEEEeecCCCceEEEECCCeEEEE
Confidence 0 000 1110 122334444433332 11223 345677777677777778888899999
Q ss_pred cEEEEecCCch
Q 006025 234 DLLIGADGIWS 244 (664)
Q Consensus 234 dlvVgADG~~S 244 (664)
|.||.|.|...
T Consensus 111 ~~liiATG~~~ 121 (314)
T 4a5l_A 111 KSVIIATGATA 121 (314)
T ss_dssp EEEEECCCEEE
T ss_pred eEEEEcccccc
Confidence 99999999754
No 140
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.54 E-value=1.4e-06 Score=97.32 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=33.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+||||||||+|||++|+.|+++|.+|+|+||...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 357999999999999999999999999999999754
No 141
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.53 E-value=2.7e-07 Score=103.43 Aligned_cols=133 Identities=17% Similarity=0.212 Sum_probs=72.4
Q ss_pred cccccccccCCCCCC-CCCCCCcCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCccccCCCCcccceeeCchHHHH
Q 006025 56 PTQMKAAVAESPTNN-SDSENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAA 132 (664)
Q Consensus 56 ~~~~~~~~~~~~~~~-~~~~~~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 132 (664)
...+||..+++.... ..+.+..++|+|||||++|+++|..|++. |++|+|||+.+... ..+.
T Consensus 14 ~~~~np~~g~e~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-----------~~~~---- 78 (588)
T 3ics_A 14 SMTGGQQMGRTLYDDDDKDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-----------FANC---- 78 (588)
T ss_dssp --------------------CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-----------BCGG----
T ss_pred ccccchhcCccccCcccCCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-----------ccCC----
Confidence 345899999875543 23445568999999999999999999998 89999999975321 1111
Q ss_pred HHhcChhHHHHHHHhccccCccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEE
Q 006025 133 LEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVI 212 (664)
Q Consensus 133 L~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~ 212 (664)
++...+ .+... .. ... ... .+ +.+.+..+.. ++++++|+
T Consensus 79 ------~lp~~~--~g~~~--------~~--------------~~~-------~~~--~~-~~~~~~~gi~-v~~~~~V~ 117 (588)
T 3ics_A 79 ------GLPYYI--GGVIT--------ER--------------QKL-------LVQ--TV-ERMSKRFNLD-IRVLSEVV 117 (588)
T ss_dssp ------GHHHHH--TTSSC--------CG--------------GGG-------BSS--CH-HHHHHHTTCE-EECSEEEE
T ss_pred ------CCchhh--cCcCC--------Ch--------------HHh-------hcc--CH-HHHHHhcCcE-EEECCEEE
Confidence 111111 00000 00 000 000 11 1222333433 77899999
Q ss_pred EEEeeCCeEEEEE-cCCc--EEeccEEEEecCCch
Q 006025 213 DFKDHGDKVSVVL-ENGQ--CYAGDLLIGADGIWS 244 (664)
Q Consensus 213 ~v~~~~~~v~v~~-~~g~--~i~adlvVgADG~~S 244 (664)
+++.++..+.+.. .+|+ .+.+|.||.|.|...
T Consensus 118 ~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 118 KINKEEKTITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred EEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 9998888887765 4565 789999999999743
No 142
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.52 E-value=2.7e-07 Score=100.70 Aligned_cols=133 Identities=14% Similarity=0.171 Sum_probs=70.1
Q ss_pred ccccccccCCCCCCCC-CCCCcCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCccccCCCCcccceeeCchHHHHH
Q 006025 57 TQMKAAVAESPTNNSD-SENKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAAL 133 (664)
Q Consensus 57 ~~~~~~~~~~~~~~~~-~~~~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L 133 (664)
+.+||..+++...... .....+||+|||||++|+++|..|++. |++|+|+|+.+.... .+.
T Consensus 15 ~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-----------~~~----- 78 (480)
T 3cgb_A 15 MTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY-----------AQC----- 78 (480)
T ss_dssp ----------------------CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB-----------CGG-----
T ss_pred ccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC-----------CCC-----
Confidence 4499999887543221 111246999999999999999999996 999999998753210 000
Q ss_pred HhcChhHHHHHHHhccccCccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEE
Q 006025 134 EAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVID 213 (664)
Q Consensus 134 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~ 213 (664)
++.. .. .+... + +. . .+. ...+.+.+..+. .++.+++|+.
T Consensus 79 -----~~~~-~~-~~~~~--------~---------~~------~-------l~~--~~~~~~~~~~gv-~~~~~~~v~~ 118 (480)
T 3cgb_A 79 -----GLPY-VI-SGAIA--------S---------TE------K-------LIA--RNVKTFRDKYGI-DAKVRHEVTK 118 (480)
T ss_dssp -----GHHH-HH-TTSSS--------C---------GG------G-------GBS--SCHHHHHHTTCC-EEESSEEEEE
T ss_pred -----Ccch-hh-cCCcC--------C---------HH------H-------hhh--cCHHHHHhhcCC-EEEeCCEEEE
Confidence 1110 00 00000 0 00 0 000 001223333233 4677899999
Q ss_pred EEeeCCeEEEEE-cCCc--EEeccEEEEecCCchh
Q 006025 214 FKDHGDKVSVVL-ENGQ--CYAGDLLIGADGIWSK 245 (664)
Q Consensus 214 v~~~~~~v~v~~-~~g~--~i~adlvVgADG~~S~ 245 (664)
++.+++.+.+.. .+|+ ++++|.||.|+|....
T Consensus 119 i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 119 VDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp EETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred EECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 988777777765 4566 7999999999997654
No 143
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.52 E-value=1.6e-06 Score=96.81 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=33.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSA 112 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~ 112 (664)
..+||+|||||++|+++|+.|+++|.+|+|+||....
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3579999999999999999999999999999997543
No 144
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.47 E-value=6e-07 Score=98.91 Aligned_cols=113 Identities=19% Similarity=0.313 Sum_probs=75.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
...+||+||||||+|+++|+.|++.|++|+|+|+.. .|. . .. .. .
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-----GG~----~-~~--------~~-----------------~ 254 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-----GGQ----V-LD--------TV-----------------D 254 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-----TGG----G-TT--------CS-----------------C
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-----CCc----c-cc--------cc-----------------c
Confidence 346899999999999999999999999999998631 110 0 00 00 0
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC--CceEEeCCeEEEEEee---CCeEEEEEcCCc
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG--DEIILNESNVIDFKDH---GDKVSVVLENGQ 229 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~v~~~---~~~v~v~~~~g~ 229 (664)
+..+. +.+ ...+..+.+.|.+.+. ...++.+++|++++.+ ++.++|++.+|+
T Consensus 255 ~~~~~--------------------~~~---~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~ 311 (521)
T 1hyu_A 255 IENYI--------------------SVP---KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGA 311 (521)
T ss_dssp BCCBT--------------------TBS---SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSC
T ss_pred ccccC--------------------CCC---CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCC
Confidence 00000 000 1234455555555432 2347788899999754 236888899999
Q ss_pred EEeccEEEEecCCchh
Q 006025 230 CYAGDLLIGADGIWSK 245 (664)
Q Consensus 230 ~i~adlvVgADG~~S~ 245 (664)
++++|.||.|+|.++.
T Consensus 312 ~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 312 VLKARSIIIATGAKWR 327 (521)
T ss_dssp EEEEEEEEECCCEEEC
T ss_pred EEEcCEEEECCCCCcC
Confidence 9999999999998764
No 145
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.46 E-value=1.3e-07 Score=92.12 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=56.6
Q ss_pred CCCEEecCCCCCCCCcceeEeCCCcccccceEEEEE--C--CEEEEEECCCCcee-EEeCCCCceeecCCCCcEEeC-CC
Q 006025 553 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--D--GAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFR-PS 626 (664)
Q Consensus 553 ~~~~~iGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~--~~~~~~Dl~S~nGt-~vn~~~~~~~~l~~~~~~~l~-~g 626 (664)
...++|||.+. |||+|++. + ||.+.++ + +.|+|+|++|+||| ||||+ ++.. ...|+ .|
T Consensus 91 ~~~itIG~~~~-----~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~-----~i~~--~~~L~~~G 154 (238)
T 1wv3_A 91 QDTMTIGPNAY-----DDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYE-----LQEQ--LTNKAYIG 154 (238)
T ss_dssp CSEEEEESSTT-----SSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTE-----ECCS--SEEEEETT
T ss_pred CceEEEeCCCC-----CeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCE-----Eecc--ceeccCCc
Confidence 34899999998 99999887 3 6877777 3 58999999999996 99998 7753 46899 99
Q ss_pred CEEEECCCc
Q 006025 627 DTIEFGSDK 635 (664)
Q Consensus 627 d~i~~g~~~ 635 (664)
|.|.+|...
T Consensus 155 D~I~ig~~~ 163 (238)
T 1wv3_A 155 DHIYVEGIW 163 (238)
T ss_dssp CEEEETTEE
T ss_pred CEEEECCEE
Confidence 999999863
No 146
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.45 E-value=2.6e-06 Score=95.93 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=33.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+||+|||||++||++|+.|+++|.+|+|+||...
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 357999999999999999999999999999999754
No 147
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.42 E-value=4.9e-07 Score=98.58 Aligned_cols=54 Identities=13% Similarity=0.099 Sum_probs=42.2
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEE---cCCcEEeccEEEEecCCchh
Q 006025 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL---ENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~---~~g~~i~adlvVgADG~~S~ 245 (664)
.|.+.|.+.++. .++.+++|++|+.+++++.|++ .+|++++||.||.|-+....
T Consensus 239 ~l~~~l~~~lg~-~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 239 VLIDALAASLGD-AAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp HHHHHHHHHHGG-GEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHhhh-hEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 455666666654 4889999999998888888988 67888999999999998764
No 148
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.42 E-value=3.4e-07 Score=98.40 Aligned_cols=48 Identities=19% Similarity=0.320 Sum_probs=39.8
Q ss_pred HHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCc
Q 006025 194 QILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 243 (664)
Q Consensus 194 ~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~ 243 (664)
+.+.+..+ .++.+++|++|+.++++++|++.+|++++||.||.|-|..
T Consensus 211 ~~~~~~~g--~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 211 DAMSQEIP--EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHTTCS--CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHhhCC--ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 33344444 5889999999999888999999999889999999999954
No 149
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.41 E-value=9e-07 Score=96.11 Aligned_cols=33 Identities=30% Similarity=0.537 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
.+||+||||||+|+++|+.|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 479999999999999999999999999999986
No 150
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.38 E-value=9.6e-07 Score=96.29 Aligned_cols=35 Identities=34% Similarity=0.537 Sum_probs=32.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+||+||||||+|+++|+.|++.|++|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35799999999999999999999999999999853
No 151
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.38 E-value=2.2e-06 Score=94.52 Aligned_cols=54 Identities=20% Similarity=0.190 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
.|-+.|.+.++.. ++++++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 216 ~l~~~l~~~lg~~-i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l 269 (520)
T 1s3e_A 216 QVSERIMDLLGDR-VKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLG 269 (520)
T ss_dssp HHHHHHHHHHGGG-EESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGG
T ss_pred HHHHHHHHHcCCc-EEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHH
Confidence 4455555555544 88999999999888889999999999999999999998763
No 152
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.37 E-value=3e-07 Score=94.17 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=32.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..|||+||||||||+++|+.|++.|++|+|||+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 4699999999999999999999999999999985
No 153
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.33 E-value=3.4e-06 Score=96.65 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=36.5
Q ss_pred eEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCc
Q 006025 204 IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIW 243 (664)
Q Consensus 204 ~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~ 243 (664)
.|+++++|++|+.++++|+|++.+|++++||.||.|-...
T Consensus 545 ~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 545 DIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred cEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 4889999999999988999999999999999999999754
No 154
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.30 E-value=2e-06 Score=93.91 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=32.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+||+|||||++|+++|+.|++.|++|+|+|+.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 35899999999999999999999999999999864
No 155
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.27 E-value=1.8e-06 Score=92.79 Aligned_cols=111 Identities=15% Similarity=0.239 Sum_probs=69.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
.+||+|||||++|+++|..|++.|+ +|+|+|+.+...... + .+. ...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~----------~-----------~l~-----~~~----- 52 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHL----------P-----------PLS-----KAY----- 52 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCS----------G-----------GGG-----TTT-----
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcC----------C-----------CCc-----HHH-----
Confidence 5799999999999999999999999 799999864211000 0 000 000
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEecc
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~ad 234 (664)
..+.. .. .... + .+.+.+. ..+ ..++.+++|+.++.++. +|++.+|+++++|
T Consensus 53 ----~~~~~-----~~------~~~~------~---~~~~~~~-~~g-v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d 104 (431)
T 1q1r_A 53 ----LAGKA-----TA------ESLY------L---RTPDAYA-AQN-IQLLGGTQVTAINRDRQ--QVILSDGRALDYD 104 (431)
T ss_dssp ----TTTCS-----CS------GGGB------S---SCHHHHH-HTT-EEEECSCCEEEEETTTT--EEEETTSCEEECS
T ss_pred ----hCCCC-----Ch------HHhc------c---cCHHHHH-hCC-CEEEeCCEEEEEECCCC--EEEECCCCEEECC
Confidence 00000 00 0000 0 0112222 223 34777899999986554 5667788899999
Q ss_pred EEEEecCCchhh
Q 006025 235 LLIGADGIWSKV 246 (664)
Q Consensus 235 lvVgADG~~S~v 246 (664)
.||.|+|.++..
T Consensus 105 ~lviAtG~~p~~ 116 (431)
T 1q1r_A 105 RLVLATGGRPRP 116 (431)
T ss_dssp EEEECCCEEECC
T ss_pred EEEEcCCCCccC
Confidence 999999997654
No 156
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.27 E-value=2.3e-06 Score=87.36 Aligned_cols=111 Identities=23% Similarity=0.337 Sum_probs=69.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEE-EccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~-~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
..+||+|||||++|+++|..|+++|++|+| +|+... |. .. . ... .
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~-----gG---~~-~--------------------~~~-----~ 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP-----GG---QI-T--------------------SSS-----E 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST-----TG---GG-G--------------------GCS-----C
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC-----Cc---ee-e--------------------eec-----e
Confidence 357999999999999999999999999999 998421 10 00 0 000 0
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEeeC--CeEEEEEcCCcE
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--DKVSVVLENGQC 230 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~v~~~~--~~v~v~~~~g~~ 230 (664)
+. . +. +.+ ..+....+...+.+.+.. ..++.+ +|+++ .++ +.+.+.+..+.+
T Consensus 49 ~~----~--------~~--------~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~ 104 (315)
T 3r9u_A 49 IE----N--------YP--------GVA--QVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKT 104 (315)
T ss_dssp BC----C--------ST--------TCC--SCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCE
T ss_pred ec----c--------CC--------CCC--CCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCE
Confidence 00 0 00 000 123345566666554432 235655 88898 666 677753433228
Q ss_pred EeccEEEEecCCch
Q 006025 231 YAGDLLIGADGIWS 244 (664)
Q Consensus 231 i~adlvVgADG~~S 244 (664)
+.+|.||.|.|...
T Consensus 105 ~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 105 ELAKAVIVCTGSAP 118 (315)
T ss_dssp EEEEEEEECCCEEE
T ss_pred EEeCEEEEeeCCCC
Confidence 99999999999843
No 157
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=4.2e-06 Score=90.98 Aligned_cols=35 Identities=34% Similarity=0.580 Sum_probs=32.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45899999999999999999999999999999874
No 158
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.22 E-value=4.6e-06 Score=88.02 Aligned_cols=109 Identities=19% Similarity=0.182 Sum_probs=69.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
.++.+|+|||||+||+++|..|++.+++|+|||+.+..... .+ .+...+ . +......
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~----------~~-----------~l~~~l-~-g~~~~~~ 63 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY----------RP-----------RLNEII-A-KNKSIDD 63 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC----------GG-----------GHHHHH-H-SCCCGGG
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc----------cC-----------hhhHHH-c-CCCCHHH
Confidence 34568999999999999999998889999999987532110 00 111111 1 1000000
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEecc
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGD 234 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~ad 234 (664)
+ .. .+.+.+ +..+ ..++.+++|++++.++. +|++++|+++.+|
T Consensus 64 l------------------------------~~---~~~~~~-~~~~-i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd 106 (385)
T 3klj_A 64 I------------------------------LI---KKNDWY-EKNN-IKVITSEFATSIDPNNK--LVTLKSGEKIKYE 106 (385)
T ss_dssp T------------------------------BS---SCHHHH-HHTT-CEEECSCCEEEEETTTT--EEEETTSCEEECS
T ss_pred c------------------------------cC---CCHHHH-HHCC-CEEEeCCEEEEEECCCC--EEEECCCCEEECC
Confidence 0 00 011112 2223 34778999999987665 5677899999999
Q ss_pred EEEEecCCc
Q 006025 235 LLIGADGIW 243 (664)
Q Consensus 235 lvVgADG~~ 243 (664)
.||.|.|..
T Consensus 107 ~lvlAtG~~ 115 (385)
T 3klj_A 107 KLIIASGSI 115 (385)
T ss_dssp EEEECCCEE
T ss_pred EEEEecCCC
Confidence 999999974
No 159
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.22 E-value=1e-05 Score=91.34 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=32.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHH---H-cCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAK---R-KGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~---~-~g~~~~~~~~~~~ 111 (664)
..+||+|||||+|||++|+.|+ + +|.+|+|+||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3579999999999999999999 6 8999999999864
No 160
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.19 E-value=3.2e-06 Score=91.96 Aligned_cols=35 Identities=20% Similarity=0.106 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~ 111 (664)
++||+|||||++|+++|..|+++ |++|+|||+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 46999999999999999999999 999999999753
No 161
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=3.1e-06 Score=91.59 Aligned_cols=33 Identities=39% Similarity=0.566 Sum_probs=31.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
.+||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 479999999999999999999999999999986
No 162
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.15 E-value=1.3e-05 Score=90.31 Aligned_cols=36 Identities=28% Similarity=0.449 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc------CCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRK------GFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~------g~~~~~~~~~~~ 111 (664)
..+||||||||+|||++|+.|+++ |.+|+|+||...
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 358999999999999999999998 999999999754
No 163
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.11 E-value=1.7e-05 Score=87.27 Aligned_cols=38 Identities=29% Similarity=0.485 Sum_probs=34.3
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 73 SENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 73 ~~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+++..+||+||||||+|+++|+.|++.|++|+|+|+.+
T Consensus 28 ~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 28 PKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 34457899999999999999999999999999999864
No 164
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.09 E-value=8.1e-06 Score=90.93 Aligned_cols=111 Identities=20% Similarity=0.244 Sum_probs=69.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
++|+|||||++|+++|..|+++ |++|+|+|+.+... ..+. ++...+ .+....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-----------~~~~----------~l~~~~--~~~~~~--- 55 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-----------FANC----------GLPYHI--SGEIAQ--- 55 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-----------BCGG----------GHHHHH--TSSSCC---
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-----------cccc----------CchHHh--cCCcCC---
Confidence 4899999999999999999998 89999999975321 1110 111100 000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEE-cCCc--EEe
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVL-ENGQ--CYA 232 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~-~~g~--~i~ 232 (664)
. ... .. ...+.+.+..+. .++.+++|++++.++..+++.. .+|+ +++
T Consensus 56 -------~------------~~~-------~~---~~~~~~~~~~~i-~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~ 105 (565)
T 3ntd_A 56 -------R------------SAL-------VL---QTPESFKARFNV-EVRVKHEVVAIDRAAKLVTVRRLLDGSEYQES 105 (565)
T ss_dssp -------G------------GGG-------BC---CCHHHHHHHHCC-EEETTEEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred -------h------------HHh-------hc---cCHHHHHHhcCc-EEEECCEEEEEECCCCEEEEEecCCCCeEEEE
Confidence 0 000 00 001222233333 3678999999998888777764 2343 799
Q ss_pred ccEEEEecCCch
Q 006025 233 GDLLIGADGIWS 244 (664)
Q Consensus 233 adlvVgADG~~S 244 (664)
+|.||.|.|...
T Consensus 106 ~d~lviAtG~~p 117 (565)
T 3ntd_A 106 YDTLLLSPGAAP 117 (565)
T ss_dssp CSEEEECCCEEE
T ss_pred CCEEEECCCCCC
Confidence 999999999853
No 165
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.08 E-value=1e-05 Score=88.40 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcC---CeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKG---FEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g---~~~~~~~~~~ 110 (664)
++||+|||||++|+++|..|++.| ++|+|+|+.+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 589999999999999999999998 9999999875
No 166
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.08 E-value=8.2e-06 Score=88.18 Aligned_cols=34 Identities=26% Similarity=0.578 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~ 111 (664)
+||+|||||++|+++|..|+++ |++|+|||+.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5999999999999999999998 999999999753
No 167
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.06 E-value=1.2e-05 Score=85.56 Aligned_cols=106 Identities=18% Similarity=0.323 Sum_probs=67.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCe--EEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~--~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
++|+|||||++|+++|..|+++|++ |+|+|+.+....... .+...+.. +......
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~---------------------~l~~~~~~-g~~~~~~- 59 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP---------------------SLSKAVLD-GSLERPP- 59 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG---------------------GGGTHHHH-TSSSSCC-
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc---------------------cccHHHhC-CCCCHHH-
Confidence 4899999999999999999999988 999998753211000 01111111 0000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccE
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adl 235 (664)
. +. ..+.+ +..+ ..++.+++|+.++.+.. +|++.+|+++.+|.
T Consensus 60 ------------~-~~--------------------~~~~~-~~~~-i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~ 102 (410)
T 3ef6_A 60 ------------I-LA--------------------EADWY-GEAR-IDMLTGPEVTALDVQTR--TISLDDGTTLSADA 102 (410)
T ss_dssp ------------B-SS--------------------CTTHH-HHTT-CEEEESCCEEEEETTTT--EEEETTSCEEECSE
T ss_pred ------------h-cC--------------------CHHHH-HHCC-CEEEeCCEEEEEECCCC--EEEECCCCEEECCE
Confidence 0 00 00111 1223 34778899999976554 56778899999999
Q ss_pred EEEecCCc
Q 006025 236 LIGADGIW 243 (664)
Q Consensus 236 vVgADG~~ 243 (664)
||.|.|..
T Consensus 103 lvlAtG~~ 110 (410)
T 3ef6_A 103 IVIATGSR 110 (410)
T ss_dssp EEECCCEE
T ss_pred EEEccCCc
Confidence 99999976
No 168
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.06 E-value=8e-06 Score=87.20 Aligned_cols=36 Identities=33% Similarity=0.676 Sum_probs=32.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCe--EEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~--~~~~~~~~~ 111 (664)
..+||+|||||++|+++|..|+++|++ |+|+|+.+.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCC
Confidence 457999999999999999999999998 999998753
No 169
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.06 E-value=1.9e-05 Score=83.33 Aligned_cols=101 Identities=22% Similarity=0.330 Sum_probs=74.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+..... .++..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-------------------~~~~~~---------------- 189 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG-------------------LLHPAA---------------- 189 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-------------------ccCHHH----------------
Confidence 568999999999999999999999999999986421100 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++.+++++.|++.+|+++++|+|
T Consensus 190 --------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~v 235 (384)
T 2v3a_A 190 --------------------------------AKAVQAGLEG-LG-VRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLV 235 (384)
T ss_dssp --------------------------------HHHHHHHHHT-TT-CEEEESCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-cC-CEEEeCCEEEEEEecCCEEEEEECCCCEEECCEE
Confidence 0122222222 22 3477899999999888888899999999999999
Q ss_pred EEecCCchhh
Q 006025 237 IGADGIWSKV 246 (664)
Q Consensus 237 VgADG~~S~v 246 (664)
|.|.|..+..
T Consensus 236 v~a~G~~p~~ 245 (384)
T 2v3a_A 236 VSAVGLRPRT 245 (384)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCH
Confidence 9999998764
No 170
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.05 E-value=1.1e-05 Score=87.14 Aligned_cols=34 Identities=32% Similarity=0.543 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (664)
.+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 47999999999999999999998 89999999975
No 171
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.05 E-value=7.1e-06 Score=88.26 Aligned_cols=33 Identities=27% Similarity=0.512 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~ 110 (664)
+||+|||||++|+++|..|++ .|++|+|||+.+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 689999999999999999999 899999999875
No 172
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.02 E-value=2.8e-05 Score=84.04 Aligned_cols=100 Identities=27% Similarity=0.362 Sum_probs=74.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+..... .+..+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~--------------------~~~~~---------------- 210 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT--------------------MDLEV---------------- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999986421100 00000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++.+++++.+++++|+++++|.|
T Consensus 211 --------------------------------~~~l~~~l~~-~G-v~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~v 256 (455)
T 2yqu_A 211 --------------------------------SRAAERVFKK-QG-LTIRTGVRVTAVVPEAKGARVELEGGEVLEADRV 256 (455)
T ss_dssp --------------------------------HHHHHHHHHH-HT-CEEECSCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEE
Confidence 0112333332 23 3477899999999888888888888989999999
Q ss_pred EEecCCchhh
Q 006025 237 IGADGIWSKV 246 (664)
Q Consensus 237 VgADG~~S~v 246 (664)
|.|.|..+..
T Consensus 257 v~A~G~~p~~ 266 (455)
T 2yqu_A 257 LVAVGRRPYT 266 (455)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCC
Confidence 9999988654
No 173
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.01 E-value=2.3e-06 Score=96.18 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=48.9
Q ss_pred cccccccccccc-ccccccccCCCcccccccccccCCCCCCCCCCCCcCcEEEECCCHHHHHHHHHHHHcC--------C
Q 006025 31 CIEFSRYDHCIN-YKFRTGTSGQSKNPTQMKAAVAESPTNNSDSENKKLRILVAGGGIGGLVFALAAKRKG--------F 101 (664)
Q Consensus 31 ~~~i~~c~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~g~~g~~~a~~l~~~g--------~ 101 (664)
.++|++||+ + |.......+...|. ++.....++.....+ ...++|+|||||++||++|+.|++.| +
T Consensus 14 ~~~i~~ci~--~ac~~~~~~~~~~~~~--v~~~~~~~~~~~~~~-~~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~ 88 (721)
T 3ayj_A 14 EKKIATTVG--EARLSGINYRHPDSAL--VSYPVAAAAPLGRLP-AGNYRIAIVGGGAGGIAALYELGRLAATLPAGSGI 88 (721)
T ss_dssp --CCCCBHH--HHHHHSTTCCCGGGTT--CCHHHHTTSCCBCCC-SSEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEE
T ss_pred hhhhhhhHH--HHhccchhcccchhhh--cccccccccccCCCC-CCCCeEEEECCCHHHHHHHHHHHHcCcccccCCCc
Confidence 388999999 6 55544443334443 441111111111111 23468999999999999999999999 9
Q ss_pred eEEEEccCC
Q 006025 102 EVLVFEKDM 110 (664)
Q Consensus 102 ~~~~~~~~~ 110 (664)
+|+|+|+..
T Consensus 89 ~V~v~E~~~ 97 (721)
T 3ayj_A 89 DVQIYEADP 97 (721)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 999999876
No 174
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.01 E-value=1.2e-05 Score=85.63 Aligned_cols=35 Identities=20% Similarity=0.508 Sum_probs=31.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCe--EEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFE--VLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~--~~~~~~~~ 110 (664)
..+||+|||||++|+++|..|++.|++ |+|+|+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 357999999999999999999999984 99999875
No 175
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.01 E-value=1.8e-05 Score=85.34 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (664)
+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 4899999999999999999998 99999999875
No 176
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.00 E-value=2.2e-05 Score=85.42 Aligned_cols=35 Identities=34% Similarity=0.547 Sum_probs=32.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 35899999999999999999999999999999874
No 177
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.99 E-value=2.9e-05 Score=84.20 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+||+||||||+|+++|..|++.|++|+|+||..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 5899999999999999999999999999999764
No 178
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.98 E-value=1.8e-05 Score=84.03 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
++|+|||||++|+++|..|+++|+ +|+|+|+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 589999999999999999999999 899999975
No 179
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.98 E-value=1.9e-05 Score=85.30 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (664)
+||+|||||++|+++|..|++. |++|+|+|+.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999875
No 180
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.96 E-value=4.1e-05 Score=82.93 Aligned_cols=100 Identities=26% Similarity=0.326 Sum_probs=72.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 212 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP--------------------QGDPET---------------- 212 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEc-C--Cc--EE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-N--GQ--CY 231 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~-~--g~--~i 231 (664)
...+.+.|.+ .+ ..++.+++|++++.+++.+.+++. + |+ ++
T Consensus 213 --------------------------------~~~l~~~l~~-~g-V~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 258 (464)
T 2eq6_A 213 --------------------------------AALLRRALEK-EG-IRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEV 258 (464)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSEEEEEEEEETTEEEEEEEETTCCSCEEE
T ss_pred --------------------------------HHHHHHHHHh-cC-CEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEE
Confidence 0122333332 23 347889999999988888888886 6 76 89
Q ss_pred eccEEEEecCCchhh
Q 006025 232 AGDLLIGADGIWSKV 246 (664)
Q Consensus 232 ~adlvVgADG~~S~v 246 (664)
++|+||.|.|..+..
T Consensus 259 ~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 259 VVDKVLVAVGRKPRT 273 (464)
T ss_dssp EESEEEECSCEEESC
T ss_pred EcCEEEECCCcccCC
Confidence 999999999987654
No 181
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.96 E-value=3e-05 Score=79.94 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+||+|||||+||+.+|+.|+++|++|+|+|+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 589999999999999999999999999999875
No 182
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.94 E-value=2.6e-05 Score=85.25 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=42.3
Q ss_pred eeCHHHHHHHHHHhcCC--ceEEeCCeEEEEEeeC--------CeEEEEEcCC-----cEEeccEEEEecCC
Q 006025 186 VISRMTLQQILAKAVGD--EIILNESNVIDFKDHG--------DKVSVVLENG-----QCYAGDLLIGADGI 242 (664)
Q Consensus 186 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~v~~~~--------~~v~v~~~~g-----~~i~adlvVgADG~ 242 (664)
...|.++.+.|...+.. ..++++++|++++..+ +.++|+..++ +++.|+.||.|.|.
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 45688888888655432 2488999999998644 2478887654 36899999999994
No 183
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.93 E-value=4.9e-06 Score=85.73 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=32.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHH--cCCeEEEEccCCc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 111 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~--~g~~~~~~~~~~~ 111 (664)
...+||+|||||||||++|+.|++ .|++|+||||...
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 345799999999999999999985 4999999999754
No 184
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.93 E-value=4.6e-05 Score=81.66 Aligned_cols=34 Identities=21% Similarity=0.492 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHH--cCCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKR--KGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~--~g~~~~~~~~~~~ 111 (664)
+||+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 589999999999999999999 8999999999753
No 185
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.92 E-value=6.3e-05 Score=81.94 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=32.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
...+||+||||||+|+++|+.|++.|++|+|+||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 34689999999999999999999999999999964
No 186
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.91 E-value=2.3e-05 Score=82.17 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=30.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..||+|||||++|+++|..|++.| +|+|+|+.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC
Confidence 359999999999999999999999 999999875
No 187
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.91 E-value=3.9e-05 Score=83.68 Aligned_cols=35 Identities=37% Similarity=0.500 Sum_probs=32.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+||+||||||+|+++|+.|++.|++|+|+|+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 46899999999999999999999999999999853
No 188
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.90 E-value=5.8e-06 Score=90.35 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=33.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~ 111 (664)
+..+||+|||||+||+++|..|+++ |++|+|||+.+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 4568999999999999999999887 899999998753
No 189
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.88 E-value=6.6e-05 Score=80.94 Aligned_cols=100 Identities=21% Similarity=0.209 Sum_probs=72.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 210 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP--------------------SFDPMI---------------- 210 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh--------------------hhhHHH----------------
Confidence 46899999999999999999999999999998642110 010000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCe-EEEEEcCCcEEeccE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDL 235 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~-v~v~~~~g~~i~adl 235 (664)
...+.+.|.+ .+ ..++.+++|++++.++++ +.|++.+|+++++|+
T Consensus 211 --------------------------------~~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~ 256 (450)
T 1ges_A 211 --------------------------------SETLVEVMNA-EG-PQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDC 256 (450)
T ss_dssp --------------------------------HHHHHHHHHH-HS-CEEECSCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCE
Confidence 0122333332 23 347789999999876544 788899999999999
Q ss_pred EEEecCCchhh
Q 006025 236 LIGADGIWSKV 246 (664)
Q Consensus 236 vVgADG~~S~v 246 (664)
||.|.|..+.+
T Consensus 257 vv~a~G~~p~~ 267 (450)
T 1ges_A 257 LIWAIGREPAN 267 (450)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999987654
No 190
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.86 E-value=3.4e-05 Score=82.74 Aligned_cols=33 Identities=21% Similarity=0.475 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (664)
++|+|||||+||+++|..|++.+ ++|+|||+++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 47999999999999999999876 8999999875
No 191
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.86 E-value=7.4e-05 Score=79.45 Aligned_cols=33 Identities=36% Similarity=0.510 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH---cCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKR---KGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~---~g~~~~~~~~~~ 110 (664)
.+|+|||||++|+++|..|++ .|++|+|+|+.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 479999999999999999999 899999999875
No 192
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.84 E-value=8.4e-06 Score=89.52 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcCC--ceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 190 MTLQQILAKAVGD--EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 190 ~~l~~~L~~~~~~--~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
..|.+.|.+.+.. ..++.+++|+++..+++. +++.+|++++||.||.+--....
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l 277 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFL 277 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHH
Confidence 3566677776653 257889999999877665 46789999999999977655433
No 193
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.83 E-value=0.0001 Score=79.68 Aligned_cols=100 Identities=21% Similarity=0.167 Sum_probs=73.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.... .++..+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~--------------------~~~~~~~--------------- 210 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF--------------------QFDPLLS--------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc--------------------ccCHHHH---------------
Confidence 45899999999999999999999999999998642110 0100000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCc-EEeccE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ-CYAGDL 235 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~-~i~adl 235 (664)
..+.+.|.+ .+ ..++.+++|++++.+++++.|++.+|+ ++++|+
T Consensus 211 ---------------------------------~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~ 255 (463)
T 2r9z_A 211 ---------------------------------ATLAENMHA-QG-IETHLEFAVAALERDAQGTTLVAQDGTRLEGFDS 255 (463)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEESSCCEEEEEEETTEEEEEETTCCEEEEESE
T ss_pred ---------------------------------HHHHHHHHH-CC-CEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCE
Confidence 122233322 23 347889999999887777889999998 899999
Q ss_pred EEEecCCchhh
Q 006025 236 LIGADGIWSKV 246 (664)
Q Consensus 236 vVgADG~~S~v 246 (664)
||.|.|..+..
T Consensus 256 vv~a~G~~p~~ 266 (463)
T 2r9z_A 256 VIWAVGRAPNT 266 (463)
T ss_dssp EEECSCEEESC
T ss_pred EEECCCCCcCC
Confidence 99999987643
No 194
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.81 E-value=2.3e-05 Score=85.62 Aligned_cols=36 Identities=22% Similarity=0.428 Sum_probs=32.8
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.++.+|||||||+||+.+|..|++.+++|+|||+++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 345689999999999999999999999999999875
No 195
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.81 E-value=7e-05 Score=81.92 Aligned_cols=34 Identities=35% Similarity=0.431 Sum_probs=31.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc---CCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~---g~~~~~~~~~~ 110 (664)
.+||+|||||++|+++|..|++. |++|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 37999999999999999999999 99999999874
No 196
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.78 E-value=0.00013 Score=80.22 Aligned_cols=35 Identities=34% Similarity=0.518 Sum_probs=32.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
.|||+||||||+|+++|..+++.|.+|+|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 48999999999999999999999999999998653
No 197
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.78 E-value=3.6e-05 Score=81.18 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcC--CeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (664)
.+||+|||||++|+++|..|++.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 579999999999999999999999 5689999864
No 198
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.78 E-value=0.00019 Score=77.54 Aligned_cols=142 Identities=10% Similarity=0.044 Sum_probs=81.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDR 154 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~ 154 (664)
..+|+|||||..|+.+|..|++. |.+|++++|..............-...|.....+..+.......+..... .
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~----~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYH----N 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTG----G
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhh----c
Confidence 56899999999999999999999 99999999876421111000000012333444444443222222222110 0
Q ss_pred ccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhc---CCceEEeCCeEEEEEeeCCeEEEEEc---CC
Q 006025 155 INGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLE---NG 228 (664)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~---~~~~i~~~~~v~~v~~~~~~v~v~~~---~g 228 (664)
. .+... .. .+-....+....+.+ ....++.+++|++++.+++++.|++. +|
T Consensus 303 ~--~~~~~------~~---------------~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g 359 (463)
T 3s5w_A 303 T--NYSVV------DT---------------DLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSG 359 (463)
T ss_dssp G--TSSCB------CH---------------HHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTC
T ss_pred c--CCCcC------CH---------------HHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCC
Confidence 0 00000 00 000111122222222 23358889999999998888888887 66
Q ss_pred c--EEeccEEEEecCCchh
Q 006025 229 Q--CYAGDLLIGADGIWSK 245 (664)
Q Consensus 229 ~--~i~adlvVgADG~~S~ 245 (664)
+ ++.+|+||.|.|....
T Consensus 360 ~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 360 ELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CEEEEEESEEEECCCEECC
T ss_pred CeEEEECCEEEEeeCCCCC
Confidence 5 4999999999997643
No 199
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.76 E-value=7.1e-05 Score=80.32 Aligned_cols=32 Identities=34% Similarity=0.590 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (664)
+|+||||||||+++|..|++.| .+|+|||+.+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 6999999999999999999988 5799999874
No 200
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.75 E-value=2.1e-05 Score=84.98 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=33.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+||+|||||++||++|..|+++|++|+|+|++..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~ 45 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDH 45 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 458999999999999999999999999999999753
No 201
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.72 E-value=2.6e-05 Score=83.39 Aligned_cols=53 Identities=9% Similarity=0.077 Sum_probs=41.3
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
.+.+.|.+.++.. ++.+++|++|+.++++++|++.+|+ ++||.||.|-+..-.
T Consensus 207 ~l~~~l~~~l~~~-v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~ 259 (424)
T 2b9w_A 207 AMFEHLNATLEHP-AERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKF 259 (424)
T ss_dssp HHHHHHHHHSSSC-CBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHH
T ss_pred HHHHHHHHhhcce-EEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHH
Confidence 3445555555543 6789999999988888999888875 899999999998744
No 202
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.72 E-value=2.7e-05 Score=81.31 Aligned_cols=35 Identities=37% Similarity=0.602 Sum_probs=32.8
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
...+||+|||||++||++|+.|++.|++|+|+|+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 35679999999999999999999999999999987
No 203
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=0.00018 Score=77.69 Aligned_cols=99 Identities=18% Similarity=0.265 Sum_probs=70.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 213 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS--------------------GFEKQM---------------- 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEc---CCcEEec
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NGQCYAG 233 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~---~g~~i~a 233 (664)
...+.+.|.+ .+ ..++.+++|++++.+++++.+++. +++++++
T Consensus 214 --------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~ 259 (455)
T 1ebd_A 214 --------------------------------AAIIKKRLKK-KG-VEVVTNALAKGAEEREDGVTVTYEANGETKTIDA 259 (455)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEEESEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEc
Confidence 0122233332 23 347789999999887777777765 4568999
Q ss_pred cEEEEecCCchh
Q 006025 234 DLLIGADGIWSK 245 (664)
Q Consensus 234 dlvVgADG~~S~ 245 (664)
|.||.|.|....
T Consensus 260 D~vv~a~G~~p~ 271 (455)
T 1ebd_A 260 DYVLVTVGRRPN 271 (455)
T ss_dssp SEEEECSCEEES
T ss_pred CEEEECcCCCcc
Confidence 999999998754
No 204
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.69 E-value=0.00019 Score=77.91 Aligned_cols=100 Identities=27% Similarity=0.299 Sum_probs=70.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+..... ++..+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------~~~~~---------------- 226 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS--------------------MDGEV---------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS--------------------SCHHH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc--------------------cCHHH----------------
Confidence 468999999999999999999999999999987432110 00000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEe--eCCeEEEEEc-----CCc
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKVSVVLE-----NGQ 229 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~--~~~~v~v~~~-----~g~ 229 (664)
...+.+.|.+ .+ ..++.+++|++++. +++.+.+++. +++
T Consensus 227 --------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 272 (478)
T 1v59_A 227 --------------------------------AKATQKFLKK-QG-LDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQE 272 (478)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCce
Confidence 0122233322 23 34778899999987 5566777776 356
Q ss_pred EEeccEEEEecCCchhh
Q 006025 230 CYAGDLLIGADGIWSKV 246 (664)
Q Consensus 230 ~i~adlvVgADG~~S~v 246 (664)
++.+|.||.|.|.....
T Consensus 273 ~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 273 NLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp EEEESEEEECSCEEECC
T ss_pred EEECCEEEECCCCCcCC
Confidence 89999999999987654
No 205
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.69 E-value=2.2e-05 Score=85.58 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=32.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 4689999999999999999999999999999984
No 206
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.67 E-value=2.7e-05 Score=85.02 Aligned_cols=37 Identities=35% Similarity=0.517 Sum_probs=31.7
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+.++||+||||||+|+++|+.|++.|++|+|+|+..
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3456899999999999999999999999999999864
No 207
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.65 E-value=0.00019 Score=78.14 Aligned_cols=100 Identities=21% Similarity=0.185 Sum_probs=72.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .++..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~--------------------~~~~~~~--------------- 229 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ--------------------GADRDLV--------------- 229 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST--------------------TSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--------------------ccCHHHH---------------
Confidence 46899999999999999999999999999998642110 0100000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcC----CcEEe
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN----GQCYA 232 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~----g~~i~ 232 (664)
..+.+.|.+ .+ ..++.+++|++++.+++++.+++.+ |+++.
T Consensus 230 ---------------------------------~~l~~~l~~-~g-V~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~ 274 (482)
T 1ojt_A 230 ---------------------------------KVWQKQNEY-RF-DNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQR 274 (482)
T ss_dssp ---------------------------------HHHHHHHGG-GE-EEEECSCEEEEEEEETTEEEEEEESSSCCSSCEE
T ss_pred ---------------------------------HHHHHHHHh-cC-CEEEECCEEEEEEEcCCeEEEEEeccCCCceEEE
Confidence 012222222 12 2477899999998877778888877 77899
Q ss_pred ccEEEEecCCchhh
Q 006025 233 GDLLIGADGIWSKV 246 (664)
Q Consensus 233 adlvVgADG~~S~v 246 (664)
+|.||.|.|.....
T Consensus 275 ~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 275 YDAVLVAAGRAPNG 288 (482)
T ss_dssp ESCEEECCCEEECG
T ss_pred cCEEEECcCCCcCC
Confidence 99999999987654
No 208
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.64 E-value=0.00018 Score=76.15 Aligned_cols=33 Identities=33% Similarity=0.491 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (664)
++|+|||||+||+++|..|++.| .+|+|||+++
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 57999999999999999998876 5899999874
No 209
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.00029 Score=76.56 Aligned_cols=100 Identities=18% Similarity=0.209 Sum_probs=71.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~~--------------- 229 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR--------------------KFDECIQ--------------- 229 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT--------------------TSCHHHH---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc--------------------ccCHHHH---------------
Confidence 46899999999999999999999999999998643110 0110000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCe--EEEEEcCC-cEEec
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLENG-QCYAG 233 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~--v~v~~~~g-~~i~a 233 (664)
..+.+.|.+ .+ ..++.+++|++++.++++ +.|++++| +++.+
T Consensus 230 ---------------------------------~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~ 274 (479)
T 2hqm_A 230 ---------------------------------NTITDHYVK-EG-INVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDV 274 (479)
T ss_dssp ---------------------------------HHHHHHHHH-HT-CEEECSCCEEEEEECC-CCCEEEEETTSCEEEEE
T ss_pred ---------------------------------HHHHHHHHh-CC-eEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEc
Confidence 022333333 23 347789999999876554 78888999 88999
Q ss_pred cEEEEecCCchhh
Q 006025 234 DLLIGADGIWSKV 246 (664)
Q Consensus 234 dlvVgADG~~S~v 246 (664)
|.||.|.|.....
T Consensus 275 D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 275 DELIWTIGRKSHL 287 (479)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCCCcc
Confidence 9999999987654
No 210
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.63 E-value=2.8e-05 Score=84.65 Aligned_cols=36 Identities=36% Similarity=0.433 Sum_probs=33.2
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
.+..+||+||||||+|+++|+.|++.|++|+|+|+.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 345689999999999999999999999999999975
No 211
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.63 E-value=4.3e-05 Score=83.38 Aligned_cols=53 Identities=17% Similarity=0.227 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCC---cEEeccEEEEecCCc
Q 006025 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAGDLLIGADGIW 243 (664)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g---~~i~adlvVgADG~~ 243 (664)
.|-+.|.+.++...++++++|++|+.++++|+|++.+| ++++||.||.|...+
T Consensus 240 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 46677777776344889999999999999999998886 689999999999875
No 212
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.61 E-value=3e-05 Score=85.29 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=43.6
Q ss_pred HHHHHHHHHhcCCceEEeCCeEEEEEee-CCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 190 MTLQQILAKAVGDEIILNESNVIDFKDH-GDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 190 ~~l~~~L~~~~~~~~i~~~~~v~~v~~~-~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
..+.+.|.+.+....|+++++|++|..+ ++++.|++.+|++++||.||.|-+....
T Consensus 202 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l 258 (516)
T 1rsg_A 202 DSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVL 258 (516)
T ss_dssp HHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHH
T ss_pred HHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHh
Confidence 3444555555554458899999999986 6679999999999999999999987543
No 213
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.61 E-value=3e-05 Score=83.69 Aligned_cols=56 Identities=14% Similarity=-0.006 Sum_probs=43.1
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEeeCCe-EEEEEcCCcEEeccEEEEecCCchhhhhh
Q 006025 191 TLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSKVRKN 249 (664)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~-v~v~~~~g~~i~adlvVgADG~~S~vR~~ 249 (664)
.|.+.|.+.++. .++++++|++|+.++++ +.|+. +|++++||.||.|-+.. .+.+.
T Consensus 216 ~l~~~l~~~lg~-~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~-~~~~l 272 (453)
T 2yg5_A 216 QVSIRMAEALGD-DVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN-LYSRI 272 (453)
T ss_dssp HHHHHHHHHHGG-GEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG-GGGGS
T ss_pred HHHHHHHHhcCC-cEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH-HHhcC
Confidence 455556666654 48889999999988888 88875 77889999999999987 34443
No 214
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.60 E-value=4.2e-05 Score=81.05 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=32.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc-CCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~ 110 (664)
..+||+|||||++||++|..|+++ |++|+|+|++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~ 41 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRP 41 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 368999999999999999999999 99999999875
No 215
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.60 E-value=3.9e-05 Score=83.44 Aligned_cols=35 Identities=31% Similarity=0.564 Sum_probs=33.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.++||+||||||+|+++|+.|++.|++|+|+|+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 36899999999999999999999999999999975
No 216
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.59 E-value=0.00032 Score=75.46 Aligned_cols=100 Identities=21% Similarity=0.266 Sum_probs=67.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+..... .++..+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~--------------- 193 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------------YLDKEF--------------- 193 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------TCCHHH---------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------------cCCHHH---------------
Confidence 4579999999999999999999999999999986421100 000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeE-EEEEcCCcEEecc
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGD 234 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v-~v~~~~g~~i~ad 234 (664)
...+.+.|.+ . ...++.+++|++++.+ +.+ .+.+ +++++++|
T Consensus 194 ---------------------------------~~~l~~~l~~-~-gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d 236 (447)
T 1nhp_A 194 ---------------------------------TDVLTEEMEA-N-NITIATGETVERYEGD-GRVQKVVT-DKNAYDAD 236 (447)
T ss_dssp ---------------------------------HHHHHHHHHT-T-TEEEEESCCEEEEECS-SBCCEEEE-SSCEEECS
T ss_pred ---------------------------------HHHHHHHHHh-C-CCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECC
Confidence 0122222222 1 2347788999999865 443 4555 56789999
Q ss_pred EEEEecCCchhh
Q 006025 235 LLIGADGIWSKV 246 (664)
Q Consensus 235 lvVgADG~~S~v 246 (664)
.||.|.|.....
T Consensus 237 ~vi~a~G~~p~~ 248 (447)
T 1nhp_A 237 LVVVAVGVRPNT 248 (447)
T ss_dssp EEEECSCEEESC
T ss_pred EEEECcCCCCCh
Confidence 999999987543
No 217
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.58 E-value=0.00036 Score=75.90 Aligned_cols=100 Identities=26% Similarity=0.367 Sum_probs=74.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~--------------------~~~~~~---------------- 234 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR--------------------NFDYDL---------------- 234 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++.+++++.|++.+|+++++|.|
T Consensus 235 --------------------------------~~~l~~~l~~-~G-v~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~V 280 (484)
T 3o0h_A 235 --------------------------------RQLLNDAMVA-KG-ISIIYEATVSQVQSTENCYNVVLTNGQTICADRV 280 (484)
T ss_dssp --------------------------------HHHHHHHHHH-HT-CEEESSCCEEEEEECSSSEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEE
Confidence 0123333333 23 3477899999999888888999999999999999
Q ss_pred EEecCCchhh
Q 006025 237 IGADGIWSKV 246 (664)
Q Consensus 237 VgADG~~S~v 246 (664)
|.|.|..+..
T Consensus 281 i~A~G~~p~~ 290 (484)
T 3o0h_A 281 MLATGRVPNT 290 (484)
T ss_dssp EECCCEEECC
T ss_pred EEeeCCCcCC
Confidence 9999986554
No 218
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.58 E-value=0.00062 Score=72.39 Aligned_cols=101 Identities=23% Similarity=0.228 Sum_probs=72.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||+|..|+.+|..|++.|.+|+++|+.+..... .++..+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~-------------------~~~~~~---------------- 196 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR-------------------VAGEAL---------------- 196 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh-------------------hcCHHH----------------
Confidence 568999999999999999999999999999986432100 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeE-EEEEcCCcEEeccE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDL 235 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v-~v~~~~g~~i~adl 235 (664)
...+.+.+. ..+ ..++.+++|++++.+++++ .|++.+|+++.||+
T Consensus 197 --------------------------------~~~l~~~l~-~~G-V~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~ 242 (415)
T 3lxd_A 197 --------------------------------SEFYQAEHR-AHG-VDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADI 242 (415)
T ss_dssp --------------------------------HHHHHHHHH-HTT-CEEEETCCEEEEEESSSBEEEEEESSSCEEECSE
T ss_pred --------------------------------HHHHHHHHH-hCC-CEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 001222222 223 3477899999998876666 68899999999999
Q ss_pred EEEecCCchhh
Q 006025 236 LIGADGIWSKV 246 (664)
Q Consensus 236 vVgADG~~S~v 246 (664)
||.|-|.....
T Consensus 243 Vv~a~G~~p~~ 253 (415)
T 3lxd_A 243 VIVGIGIVPCV 253 (415)
T ss_dssp EEECSCCEESC
T ss_pred EEECCCCccCh
Confidence 99999986543
No 219
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.58 E-value=5e-05 Score=79.93 Aligned_cols=36 Identities=28% Similarity=0.476 Sum_probs=33.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+||+|||||++|+++|..|+++|++|+|+|+.+
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~ 62 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRP 62 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccC
Confidence 346899999999999999999999999999999875
No 220
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.57 E-value=0.00062 Score=72.14 Aligned_cols=100 Identities=26% Similarity=0.392 Sum_probs=71.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+...... ++..+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~-------------------~~~~~---------------- 186 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV-------------------VTPEI---------------- 186 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT-------------------SCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc-------------------cCHHH----------------
Confidence 4679999999999999999999999999999864221000 00000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeE-EEEEcCCcEEeccE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKV-SVVLENGQCYAGDL 235 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v-~v~~~~g~~i~adl 235 (664)
...+.+.+. +.+ ..++.+++|++++.+++++ .|++++|+++.||+
T Consensus 187 --------------------------------~~~l~~~l~-~~G-V~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~ 232 (404)
T 3fg2_P 187 --------------------------------SSYFHDRHS-GAG-IRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDL 232 (404)
T ss_dssp --------------------------------HHHHHHHHH-HTT-CEEECSCCEEEEEEETTEEEEEEETTSCEEECSE
T ss_pred --------------------------------HHHHHHHHH-hCC-cEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCE
Confidence 001222222 223 3477899999998877766 48899999999999
Q ss_pred EEEecCCchh
Q 006025 236 LIGADGIWSK 245 (664)
Q Consensus 236 vVgADG~~S~ 245 (664)
||.|.|....
T Consensus 233 Vv~a~G~~p~ 242 (404)
T 3fg2_P 233 VVVGVGVIPN 242 (404)
T ss_dssp EEECCCEEEC
T ss_pred EEECcCCccC
Confidence 9999998654
No 221
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.57 E-value=9.7e-05 Score=80.59 Aligned_cols=110 Identities=17% Similarity=0.243 Sum_probs=69.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+||+|||||++|+++|..|+++ ++|+|+|+.+... |. . . .... ..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~G---G~----~------------~---------~~~~----~~ 153 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLG---GD----M------------W---------LKGI----KQ 153 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSS---CS----G------------G---------GTCS----EE
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCC---Ce----e------------e---------cccc----cc
Confidence 357999999999999999999999 9999999875320 10 0 0 0000 00
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcC-CceEEeCCeEEEEEeeCCeEEEEE-cCCc--EE
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVG-DEIILNESNVIDFKDHGDKVSVVL-ENGQ--CY 231 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~-~~~i~~~~~v~~v~~~~~~v~v~~-~~g~--~i 231 (664)
.+.+ . ...++...+.+.+. ...++.+++|.++..++..+.+.. .+++ .+
T Consensus 154 -----------------------~g~~--~--~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 206 (493)
T 1y56_A 154 -----------------------EGFN--K--DSRKVVEELVGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEI 206 (493)
T ss_dssp -----------------------TTTT--E--EHHHHHHHHHHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEE
T ss_pred -----------------------CCCC--C--CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEE
Confidence 0000 0 12233344444432 224667888888887766665544 4554 68
Q ss_pred eccEEEEecCCchh
Q 006025 232 AGDLLIGADGIWSK 245 (664)
Q Consensus 232 ~adlvVgADG~~S~ 245 (664)
++|.||.|.|....
T Consensus 207 ~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 207 LAKRVVLATGAIDS 220 (493)
T ss_dssp EESCEEECCCEEEC
T ss_pred ECCEEEECCCCCcc
Confidence 99999999998643
No 222
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.57 E-value=3.9e-05 Score=83.09 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=31.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+||+||||||+|+++|+.|+++|++|+|+|+.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3589999999999999999999999999999984
No 223
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.56 E-value=0.00057 Score=73.07 Aligned_cols=100 Identities=24% Similarity=0.351 Sum_probs=70.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... .++..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-------------------~~~~~~---------------- 193 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER-------------------VTAPPV---------------- 193 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-------------------hhhHHH----------------
Confidence 468999999999999999999999999999986421100 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEe--eCCeE-EEEEcCCcEEec
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKD--HGDKV-SVVLENGQCYAG 233 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~--~~~~v-~v~~~~g~~i~a 233 (664)
...+.+.|.+ .+. .++.+++|++++. +++.+ .|++.+|+++.+
T Consensus 194 --------------------------------~~~l~~~l~~-~GV-~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~ 239 (431)
T 1q1r_A 194 --------------------------------SAFYEHLHRE-AGV-DIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPA 239 (431)
T ss_dssp --------------------------------HHHHHHHHHH-HTC-EEECSCCEEEEEECTTTCCEEEEEETTSCEEEC
T ss_pred --------------------------------HHHHHHHHHh-CCe-EEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEc
Confidence 0012222222 233 4778899999986 44555 688889999999
Q ss_pred cEEEEecCCchh
Q 006025 234 DLLIGADGIWSK 245 (664)
Q Consensus 234 dlvVgADG~~S~ 245 (664)
|+||.|.|....
T Consensus 240 D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 240 DLVIAGIGLIPN 251 (431)
T ss_dssp SEEEECCCEEEC
T ss_pred CEEEECCCCCcC
Confidence 999999998654
No 224
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.55 E-value=0.00045 Score=75.48 Aligned_cols=100 Identities=22% Similarity=0.281 Sum_probs=71.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .++..+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~~--------------- 220 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR--------------------KFDESVI--------------- 220 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT--------------------TSCHHHH---------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc--------------------ccchhhH---------------
Confidence 46899999999999999999999999999998643210 0100000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCC-eEEEEEcCCcE-Eecc
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQC-YAGD 234 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~-~v~v~~~~g~~-i~ad 234 (664)
..+.+.|.+ .+ ..++.+++|++++.+++ .+.|++.+|++ +.+|
T Consensus 221 ---------------------------------~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D 265 (500)
T 1onf_A 221 ---------------------------------NVLENDMKK-NN-INIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFD 265 (500)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEECSCCEEEEEESSTTCEEEEETTSCEEEEES
T ss_pred ---------------------------------HHHHHHHHh-CC-CEEEECCEEEEEEEcCCceEEEEECCCcEEEECC
Confidence 122233332 23 34778999999987653 47888889987 9999
Q ss_pred EEEEecCCchhh
Q 006025 235 LLIGADGIWSKV 246 (664)
Q Consensus 235 lvVgADG~~S~v 246 (664)
+||.|.|.....
T Consensus 266 ~vi~a~G~~p~~ 277 (500)
T 1onf_A 266 HVIYCVGRSPDT 277 (500)
T ss_dssp EEEECCCBCCTT
T ss_pred EEEECCCCCcCC
Confidence 999999987654
No 225
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.54 E-value=4.8e-05 Score=82.63 Aligned_cols=53 Identities=19% Similarity=0.126 Sum_probs=39.0
Q ss_pred HHHHHHHhcC--CceEEeCCeEEEEEeeCCe-EEEEEcCCcEEeccEEEEecCCchh
Q 006025 192 LQQILAKAVG--DEIILNESNVIDFKDHGDK-VSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 192 l~~~L~~~~~--~~~i~~~~~v~~v~~~~~~-v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
|.+.|.+.+. ...++++++|++|+.++++ +.|++ ++.+++||.||.|-+....
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~ 291 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVL 291 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHH
Confidence 4445555442 2358899999999987766 77766 5568999999999987654
No 226
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.53 E-value=0.00031 Score=74.60 Aligned_cols=100 Identities=21% Similarity=0.381 Sum_probs=71.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+... +. .++ +++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-------------~~------~~~----~~~------------ 187 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-------------VR------VLG----RRI------------ 187 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------HH------HHC----HHH------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------hh------hcC----HHH------------
Confidence 4689999999999999999999999999999864211 00 000 000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++.++....|++++|+++++|+|
T Consensus 188 --------------------------------~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~V 233 (410)
T 3ef6_A 188 --------------------------------GAWLRGLLTE-LG-VQVELGTGVVGFSGEGQLEQVMASDGRSFVADSA 233 (410)
T ss_dssp --------------------------------HHHHHHHHHH-HT-CEEECSCCEEEEECSSSCCEEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEE
Confidence 0022223322 23 3477899999998766555788999999999999
Q ss_pred EEecCCchh
Q 006025 237 IGADGIWSK 245 (664)
Q Consensus 237 VgADG~~S~ 245 (664)
|.|.|..+.
T Consensus 234 v~a~G~~p~ 242 (410)
T 3ef6_A 234 LICVGAEPA 242 (410)
T ss_dssp EECSCEEEC
T ss_pred EEeeCCeec
Confidence 999998764
No 227
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.52 E-value=6.6e-05 Score=80.90 Aligned_cols=36 Identities=33% Similarity=0.477 Sum_probs=33.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~ 155 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYD 155 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 356799999999999999999999999999999975
No 228
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.50 E-value=0.00076 Score=73.45 Aligned_cols=97 Identities=22% Similarity=0.237 Sum_probs=71.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 217 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN--------------------LQDEEM---------------- 217 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT--------------------CCCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--------------------cCCHHH----------------
Confidence 46899999999999999999999999999998743110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEc--CC--cEEe
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYA 232 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~--~g--~~i~ 232 (664)
...+.+.|.+. ..++.+++|++++.+++++.+++. +| ++++
T Consensus 218 --------------------------------~~~l~~~l~~~---V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~ 262 (492)
T 3ic9_A 218 --------------------------------KRYAEKTFNEE---FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTES 262 (492)
T ss_dssp --------------------------------HHHHHHHHHTT---SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEE
T ss_pred --------------------------------HHHHHHHHhhC---cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEE
Confidence 01233333332 447789999999988888888885 67 6899
Q ss_pred ccEEEEecCCch
Q 006025 233 GDLLIGADGIWS 244 (664)
Q Consensus 233 adlvVgADG~~S 244 (664)
+|.||.|.|...
T Consensus 263 ~D~Vi~a~G~~p 274 (492)
T 3ic9_A 263 FQYVLAATGRKA 274 (492)
T ss_dssp ESEEEECSCCEE
T ss_pred CCEEEEeeCCcc
Confidence 999999999864
No 229
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.50 E-value=0.00054 Score=74.78 Aligned_cols=100 Identities=20% Similarity=0.291 Sum_probs=73.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 225 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP--------------------YEDADA---------------- 225 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC--------------------CSSHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++.+++++.+++.+|+++++|.|
T Consensus 226 --------------------------------~~~l~~~l~~-~G-V~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~V 271 (499)
T 1xdi_A 226 --------------------------------ALVLEESFAE-RG-VRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHA 271 (499)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEETTCCEEEEEECSSSEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEE
Confidence 0122233322 23 3477899999998877778888888989999999
Q ss_pred EEecCCchhh
Q 006025 237 IGADGIWSKV 246 (664)
Q Consensus 237 VgADG~~S~v 246 (664)
|.|.|..+..
T Consensus 272 v~a~G~~p~~ 281 (499)
T 1xdi_A 272 LMTIGSVPNT 281 (499)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCcCC
Confidence 9999987653
No 230
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.49 E-value=8.8e-05 Score=80.99 Aligned_cols=55 Identities=7% Similarity=0.031 Sum_probs=43.3
Q ss_pred HHHHHHHHhcCC---ceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 191 TLQQILAKAVGD---EIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 191 ~l~~~L~~~~~~---~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
.+.+.|.+.+.. ..++++++|++|+.+++++.|++.+|++++||.||.|-|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHH
Confidence 344555554422 3488999999999888889999999989999999999998654
No 231
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.48 E-value=0.00063 Score=73.50 Aligned_cols=99 Identities=27% Similarity=0.401 Sum_probs=70.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 214 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP--------------------NEDADV---------------- 214 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEc-CC--cEEec
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE-NG--QCYAG 233 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~-~g--~~i~a 233 (664)
...+.+.|.+ .+ ..++.+++|++++.+++++.+++. +| +++.+
T Consensus 215 --------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~ 260 (464)
T 2a8x_A 215 --------------------------------SKEIEKQFKK-LG-VTILTATKVESIADGGSQVTVTVTKDGVAQELKA 260 (464)
T ss_dssp --------------------------------HHHHHHHHHH-HT-CEEECSCEEEEEEECSSCEEEEEESSSCEEEEEE
T ss_pred --------------------------------HHHHHHHHHH-cC-CEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEc
Confidence 0112233322 23 347789999999877767777776 66 67999
Q ss_pred cEEEEecCCchh
Q 006025 234 DLLIGADGIWSK 245 (664)
Q Consensus 234 dlvVgADG~~S~ 245 (664)
|.||.|.|....
T Consensus 261 D~vv~a~G~~p~ 272 (464)
T 2a8x_A 261 EKVLQAIGFAPN 272 (464)
T ss_dssp SEEEECSCEEEC
T ss_pred CEEEECCCCCcc
Confidence 999999998653
No 232
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.48 E-value=0.00057 Score=75.09 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=72.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccccc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRING 157 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~~ 157 (664)
.+|+|||||..|+.+|..|++.|.+|+++|+.+.... .++..+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~--------------------~~~~~~----------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL--------------------IKDNET----------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--------------------CCSHHH-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc--------------------cccHHH-----------------
Confidence 6899999999999999999999999999998642110 000000
Q ss_pred cccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCe----EEEEEcCCc-EEe
Q 006025 158 LVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK----VSVVLENGQ-CYA 232 (664)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~----v~v~~~~g~-~i~ 232 (664)
...+.+.|.+ .+ ..++.+++|++++.++++ +.|++.+|+ +++
T Consensus 258 -------------------------------~~~l~~~l~~-~G-V~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~ 304 (523)
T 1mo9_A 258 -------------------------------RAYVLDRMKE-QG-MEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIE 304 (523)
T ss_dssp -------------------------------HHHHHHHHHH-TT-CEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEE
T ss_pred -------------------------------HHHHHHHHHh-CC-cEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEE
Confidence 0123333332 23 347889999999876555 778888887 899
Q ss_pred ccEEEEecCCchhh
Q 006025 233 GDLLIGADGIWSKV 246 (664)
Q Consensus 233 adlvVgADG~~S~v 246 (664)
+|.||.|.|..+..
T Consensus 305 aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 305 TDFVFLGLGEQPRS 318 (523)
T ss_dssp CSCEEECCCCEECC
T ss_pred cCEEEECcCCccCC
Confidence 99999999988765
No 233
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.48 E-value=0.00063 Score=73.61 Aligned_cols=101 Identities=29% Similarity=0.333 Sum_probs=70.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 217 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP--------------------TLDEDV---------------- 217 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc--------------------cCCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEc--CC--cEEe
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE--NG--QCYA 232 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~--~g--~~i~ 232 (664)
...+.+.|.+..+ ..++.+++|++++.+++++.+++. +| ++++
T Consensus 218 --------------------------------~~~l~~~l~~~~g-v~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~ 264 (468)
T 2qae_A 218 --------------------------------TNALVGALAKNEK-MKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVT 264 (468)
T ss_dssp --------------------------------HHHHHHHHHHHTC-CEEECSCEEEEEEECSSSEEEEEECC---EEEEE
T ss_pred --------------------------------HHHHHHHHhhcCC-cEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEE
Confidence 0123333312223 347789999999887767777776 66 6899
Q ss_pred ccEEEEecCCchhh
Q 006025 233 GDLLIGADGIWSKV 246 (664)
Q Consensus 233 adlvVgADG~~S~v 246 (664)
+|.||.|.|..+..
T Consensus 265 ~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 265 CEALLVSVGRRPFT 278 (468)
T ss_dssp ESEEEECSCEEECC
T ss_pred CCEEEECCCcccCC
Confidence 99999999987653
No 234
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.48 E-value=0.00067 Score=73.50 Aligned_cols=100 Identities=22% Similarity=0.339 Sum_probs=72.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc-CCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRI 155 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~ 155 (664)
..+|+|||||+.|+.+|..|++. |.+|+++++.+..... .++..+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~--------------- 204 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG-------------------FTSKSL--------------- 204 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-------------------TSCHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-------------------ccCHHH---------------
Confidence 46899999999999999999999 9999999986421100 000000
Q ss_pred cccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccE
Q 006025 156 NGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDL 235 (664)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adl 235 (664)
...+.+.|.+ .+ ..++.+++|++++.+++.+++.+.+|+++++|.
T Consensus 205 ---------------------------------~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~ 249 (472)
T 3iwa_A 205 ---------------------------------SQMLRHDLEK-ND-VVVHTGEKVVRLEGENGKVARVITDKRTLDADL 249 (472)
T ss_dssp ---------------------------------HHHHHHHHHH-TT-CEEECSCCEEEEEESSSBEEEEEESSCEEECSE
T ss_pred ---------------------------------HHHHHHHHHh-cC-CEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCE
Confidence 0122233322 23 347789999999887778888999999999999
Q ss_pred EEEecCCchh
Q 006025 236 LIGADGIWSK 245 (664)
Q Consensus 236 vVgADG~~S~ 245 (664)
||.|.|....
T Consensus 250 Vv~a~G~~p~ 259 (472)
T 3iwa_A 250 VILAAGVSPN 259 (472)
T ss_dssp EEECSCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998654
No 235
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.48 E-value=6.9e-05 Score=82.00 Aligned_cols=36 Identities=36% Similarity=0.548 Sum_probs=32.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+||+|||||++||++|+.|+++|++|+|+|+...
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~ 47 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGK 47 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 357999999999999999999999999999999754
No 236
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.47 E-value=0.00065 Score=74.05 Aligned_cols=100 Identities=23% Similarity=0.283 Sum_probs=72.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc---CCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~---g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~ 153 (664)
..+|+|||||..|+.+|..|++. |.+|+|+|+.+.... .++..+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--------------------~~d~~~------------- 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR--------------------GFDETI------------- 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT--------------------TSCHHH-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc--------------------ccCHHH-------------
Confidence 46899999999999999999999 999999998642110 011000
Q ss_pred cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCC-eEEEEEcCCcEEe
Q 006025 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (664)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~-~v~v~~~~g~~i~ 232 (664)
...+.+.|.+ .+ ..++.+++|++++.+++ .+.|++.+|++++
T Consensus 238 -----------------------------------~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 280 (495)
T 2wpf_A 238 -----------------------------------REEVTKQLTA-NG-IEIMTNENPAKVSLNTDGSKHVTFESGKTLD 280 (495)
T ss_dssp -----------------------------------HHHHHHHHHH-TT-CEEEESCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred -----------------------------------HHHHHHHHHh-CC-CEEEeCCEEEEEEEcCCceEEEEECCCcEEE
Confidence 0122333322 23 34778999999987654 4788889999999
Q ss_pred ccEEEEecCCchhh
Q 006025 233 GDLLIGADGIWSKV 246 (664)
Q Consensus 233 adlvVgADG~~S~v 246 (664)
+|+||.|.|.....
T Consensus 281 ~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 281 VDVVMMAIGRIPRT 294 (495)
T ss_dssp ESEEEECSCEEECC
T ss_pred cCEEEECCCCcccc
Confidence 99999999986543
No 237
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.46 E-value=4.9e-05 Score=82.93 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=32.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+||+||||||+|+++|..|++.|++|+|+|+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5899999999999999999999999999999863
No 238
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.46 E-value=8.2e-05 Score=78.36 Aligned_cols=35 Identities=26% Similarity=0.490 Sum_probs=32.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
.+||+|||||++|+++|..|+++|++|+|+|++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 37 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 37 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCC
Confidence 47999999999999999999999999999998753
No 239
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.46 E-value=0.00082 Score=73.75 Aligned_cols=100 Identities=17% Similarity=0.198 Sum_probs=74.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
+.+++|||||+.|+.+|..+++.|.+|+|+++... .. .++ +++.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~-L~--------------------~~D----~ei~----------- 266 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV-LR--------------------GFD----QQCA----------- 266 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS-ST--------------------TSC----HHHH-----------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc-cc--------------------ccc----hhHH-----------
Confidence 46899999999999999999999999999986421 10 011 1110
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
..+.+.|.+ .+ ..++.++.+..++..++.+.|.+.+++++.+|.|
T Consensus 267 ---------------------------------~~l~~~l~~-~g-i~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~v 311 (542)
T 4b1b_A 267 ---------------------------------VKVKLYMEE-QG-VMFKNGILPKKLTKMDDKILVEFSDKTSELYDTV 311 (542)
T ss_dssp ---------------------------------HHHHHHHHH-TT-CEEEETCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred ---------------------------------HHHHHHHHh-hc-ceeecceEEEEEEecCCeEEEEEcCCCeEEEEEE
Confidence 022333332 22 3477899999999999999999999999999999
Q ss_pred EEecCCchhhh
Q 006025 237 IGADGIWSKVR 247 (664)
Q Consensus 237 VgADG~~S~vR 247 (664)
+.|-|+...+-
T Consensus 312 LvAvGR~Pnt~ 322 (542)
T 4b1b_A 312 LYAIGRKGDID 322 (542)
T ss_dssp EECSCEEESCG
T ss_pred EEcccccCCcc
Confidence 99999876654
No 240
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.44 E-value=0.0001 Score=81.16 Aligned_cols=36 Identities=17% Similarity=0.236 Sum_probs=33.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+||+|||||++|+++|..|++.|++|+|||+..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 346899999999999999999999999999999874
No 241
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.44 E-value=9.6e-05 Score=80.09 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=32.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999999999999999999999999986
No 242
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.44 E-value=7.1e-05 Score=81.03 Aligned_cols=34 Identities=32% Similarity=0.502 Sum_probs=32.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999874
No 243
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.44 E-value=0.0011 Score=70.43 Aligned_cols=96 Identities=24% Similarity=0.337 Sum_probs=67.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+..... .++..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~---------------- 189 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR-------------------AAPATL---------------- 189 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-------------------ccCHHH----------------
Confidence 468999999999999999999999999999986421100 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++ + + .|++.+|+++++|+|
T Consensus 190 --------------------------------~~~l~~~l~~-~G-V~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~v 231 (408)
T 2gqw_A 190 --------------------------------ADFVARYHAA-QG-VDLRFERSVTGSV-D-G--VVLLDDGTRIAADMV 231 (408)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEEESCCEEEEE-T-T--EEEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHHHH-cC-cEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEE
Confidence 0122223322 23 3477899999998 3 3 677889999999999
Q ss_pred EEecCCchh
Q 006025 237 IGADGIWSK 245 (664)
Q Consensus 237 VgADG~~S~ 245 (664)
|.|.|....
T Consensus 232 i~a~G~~p~ 240 (408)
T 2gqw_A 232 VVGIGVLAN 240 (408)
T ss_dssp EECSCEEEC
T ss_pred EECcCCCcc
Confidence 999998754
No 244
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.43 E-value=0.00072 Score=73.26 Aligned_cols=101 Identities=21% Similarity=0.244 Sum_probs=70.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... + .++..+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------~------~~~~~~---------------- 222 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG-------------V------GIDMEI---------------- 222 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC-------------S------SCCHHH----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC-------------c------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 0 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCe-EEEEE-----cCCcE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVVL-----ENGQC 230 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~-v~v~~-----~~g~~ 230 (664)
...+.+.|.+ .+ ..++.+++|++++.++++ +.+++ .++++
T Consensus 223 --------------------------------~~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~ 268 (474)
T 1zmd_A 223 --------------------------------SKNFQRILQK-QG-FKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEV 268 (474)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSEEEEEEEECTTSCEEEEEEETTSCCCEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCceEEEEEEcCCceEEEEEEecCCCCceE
Confidence 0122233322 23 347789999999877666 77764 45678
Q ss_pred EeccEEEEecCCchhh
Q 006025 231 YAGDLLIGADGIWSKV 246 (664)
Q Consensus 231 i~adlvVgADG~~S~v 246 (664)
+++|+||.|.|.....
T Consensus 269 i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 269 ITCDVLLVCIGRRPFT 284 (474)
T ss_dssp EEESEEEECSCEEECC
T ss_pred EEcCEEEECcCCCcCC
Confidence 9999999999987543
No 245
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.43 E-value=0.00066 Score=73.91 Aligned_cols=100 Identities=23% Similarity=0.216 Sum_probs=72.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc---CCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK---GFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD 153 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~---g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~ 153 (664)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.... .++..+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--------------------~~d~~~------------- 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR--------------------GFDSEL------------- 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST--------------------TSCHHH-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc--------------------ccCHHH-------------
Confidence 46899999999999999999999 999999998642110 010000
Q ss_pred cccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCC-eEEEEEcCCcEEe
Q 006025 154 RINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQCYA 232 (664)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~-~v~v~~~~g~~i~ 232 (664)
...+.+.|.+ . ...++.+++|++++.+++ .+.|++.+|++++
T Consensus 234 -----------------------------------~~~l~~~l~~-~-GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 276 (490)
T 1fec_A 234 -----------------------------------RKQLTEQLRA-N-GINVRTHENPAKVTKNADGTRHVVFESGAEAD 276 (490)
T ss_dssp -----------------------------------HHHHHHHHHH-T-TEEEEETCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred -----------------------------------HHHHHHHHHh-C-CCEEEeCCEEEEEEEcCCCEEEEEECCCcEEE
Confidence 0122333332 2 234778999999987654 4788889998999
Q ss_pred ccEEEEecCCchhh
Q 006025 233 GDLLIGADGIWSKV 246 (664)
Q Consensus 233 adlvVgADG~~S~v 246 (664)
+|.||.|.|.....
T Consensus 277 ~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 277 YDVVMLAIGRVPRS 290 (490)
T ss_dssp ESEEEECSCEEESC
T ss_pred cCEEEEccCCCcCc
Confidence 99999999987543
No 246
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.42 E-value=7.8e-05 Score=81.06 Aligned_cols=34 Identities=38% Similarity=0.531 Sum_probs=32.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4689999999999999999999999999999986
No 247
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.42 E-value=0.00086 Score=74.41 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=31.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||||+.|+.+|..|++.|.+|+++++.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 4589999999999999999999999999999864
No 248
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.42 E-value=7.6e-05 Score=78.12 Aligned_cols=33 Identities=33% Similarity=0.411 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 34 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCC
Confidence 689999999999999999999999999999874
No 249
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.42 E-value=0.00011 Score=80.32 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=42.0
Q ss_pred HHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCc----EEeccEEEEecCCc
Q 006025 191 TLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQ----CYAGDLLIGADGIW 243 (664)
Q Consensus 191 ~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~----~i~adlvVgADG~~ 243 (664)
.|.+.|.+.++. .++++++|++|+.++++|.|++.+|+ +++||.||.|-+..
T Consensus 242 ~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 455566666554 48899999999998889999888775 58999999999875
No 250
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.42 E-value=9.2e-05 Score=80.13 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=32.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+||+|||||++|+++|..|++.|++|+|||+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3589999999999999999999999999999986
No 251
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.41 E-value=0.0005 Score=74.45 Aligned_cols=99 Identities=25% Similarity=0.346 Sum_probs=70.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~--------------------~~~~~~---------------- 220 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP--------------------TMDAEI---------------- 220 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc--------------------cccHHH----------------
Confidence 46899999999999999999999999999998742110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEc---CC--cEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLE---NG--QCY 231 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~---~g--~~i 231 (664)
...+.+.|.+ .+. .++.+++|++++.+++++.+++. +| +++
T Consensus 221 --------------------------------~~~l~~~l~~-~gv-~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~ 266 (470)
T 1dxl_A 221 --------------------------------RKQFQRSLEK-QGM-KFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTII 266 (470)
T ss_dssp --------------------------------HHHHHHHHHH-SSC-CEECSEEEEEEECSSSSEEEEEEESSSCCCEEE
T ss_pred --------------------------------HHHHHHHHHH-cCC-EEEeCCEEEEEEEcCCeEEEEEEecCCCcceEE
Confidence 0122233322 233 37788999999877666777765 45 689
Q ss_pred eccEEEEecCCchh
Q 006025 232 AGDLLIGADGIWSK 245 (664)
Q Consensus 232 ~adlvVgADG~~S~ 245 (664)
.+|.||.|.|....
T Consensus 267 ~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 267 EADVVLVSAGRTPF 280 (470)
T ss_dssp EESEEECCCCEEEC
T ss_pred ECCEEEECCCCCcC
Confidence 99999999998754
No 252
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.41 E-value=0.00011 Score=79.97 Aligned_cols=57 Identities=16% Similarity=0.186 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhcCCceEEeC--CeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchhhh
Q 006025 189 RMTLQQILAKAVGDEIILNE--SNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSKVR 247 (664)
Q Consensus 189 r~~l~~~L~~~~~~~~i~~~--~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~vR 247 (664)
-..|.+.|.+.++...++.+ ++|++|+.++++| ++.+|++++||.||.|-......+
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ 273 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLLR 273 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHHH
Confidence 34577777777765457788 4699999887765 458888999999999987766543
No 253
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.40 E-value=9.7e-05 Score=80.08 Aligned_cols=34 Identities=32% Similarity=0.533 Sum_probs=32.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4799999999999999999999999999999874
No 254
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.39 E-value=0.0005 Score=74.17 Aligned_cols=97 Identities=22% Similarity=0.302 Sum_probs=67.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 214 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP--------------------TYDSEL---------------- 214 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998743210 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCC--cEEecc
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG--QCYAGD 234 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g--~~i~ad 234 (664)
...+.+.|.+ .+ ..++.+++|++++. + .+.++..+| +++++|
T Consensus 215 --------------------------------~~~l~~~l~~-~g-v~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D 258 (458)
T 1lvl_A 215 --------------------------------TAPVAESLKK-LG-IALHLGHSVEGYEN-G-CLLANDGKGGQLRLEAD 258 (458)
T ss_dssp --------------------------------HHHHHHHHHH-HT-CEEETTCEEEEEET-T-EEEEECSSSCCCEECCS
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEECCEEEEEEe-C-CEEEEECCCceEEEECC
Confidence 0022233322 23 34778899999986 3 366664456 689999
Q ss_pred EEEEecCCchh
Q 006025 235 LLIGADGIWSK 245 (664)
Q Consensus 235 lvVgADG~~S~ 245 (664)
.||.|.|....
T Consensus 259 ~vv~a~G~~p~ 269 (458)
T 1lvl_A 259 RVLVAVGRRPR 269 (458)
T ss_dssp CEEECCCEEEC
T ss_pred EEEECcCCCcC
Confidence 99999998654
No 255
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.38 E-value=9e-05 Score=79.89 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=32.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
.++||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3589999999999999999999999999999986
No 256
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.35 E-value=0.00013 Score=79.84 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4799999999999999999999999999999873
No 257
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.34 E-value=0.00012 Score=82.02 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=33.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+||+|||||++|+++|+.|+++|++|+|+|+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~ 80 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEI 80 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCC
Confidence 468999999999999999999999999999999754
No 258
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.34 E-value=0.00013 Score=78.28 Aligned_cols=36 Identities=14% Similarity=0.385 Sum_probs=33.6
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+..+||+|||+|++|+++|..|++.|++|+|+|+.+
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~ 53 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNP 53 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccC
Confidence 356899999999999999999999999999999975
No 259
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.32 E-value=0.0011 Score=71.74 Aligned_cols=98 Identities=19% Similarity=0.193 Sum_probs=70.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++++.+...... ++ +
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~-------------------~d----~-------------- 214 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL-------------------ED----Q-------------- 214 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-------------------CC----H--------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC-------------------CC----H--------------
Confidence 4689999999999999999999999999999864211000 00 0
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeC-CeEEEEEc--CCc--EE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHG-DKVSVVLE--NGQ--CY 231 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~-~~v~v~~~--~g~--~i 231 (664)
.+.+.+.+.+. ..++.+++|++++.++ +++.+++. +|+ ++
T Consensus 215 ----------------------------------~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i 259 (466)
T 3l8k_A 215 ----------------------------------DIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSI 259 (466)
T ss_dssp ----------------------------------HHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEE
T ss_pred ----------------------------------HHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEE
Confidence 11122222223 3377889999998877 78888887 675 89
Q ss_pred eccEEEEecCCchhh
Q 006025 232 AGDLLIGADGIWSKV 246 (664)
Q Consensus 232 ~adlvVgADG~~S~v 246 (664)
++|.||.|-|.....
T Consensus 260 ~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 260 FTNSVVLAAGRRPVI 274 (466)
T ss_dssp EESCEEECCCEEECC
T ss_pred EcCEEEECcCCCccc
Confidence 999999999986543
No 260
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.32 E-value=0.00017 Score=77.20 Aligned_cols=54 Identities=22% Similarity=0.146 Sum_probs=40.4
Q ss_pred HHHHHHHHhc---CCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 191 TLQQILAKAV---GDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 191 ~l~~~L~~~~---~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
.+-+.|.+.+ +. .++.+++|+++..+++++.....+|++++||.||.|.|..+.
T Consensus 235 ~l~~~l~~~~~~~G~-~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGG-TYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTC-CCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCC-EEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 4555554433 33 377899999999888887755568889999999999998864
No 261
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.32 E-value=0.0018 Score=69.64 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=70.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||..|+.+|..|++.|.+|+++|+.+..... .++..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~---------------- 193 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK-------------------YFDKEF---------------- 193 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-------------------TSCHHH----------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-------------------hhhhhH----------------
Confidence 468999999999999999999999999999986421100 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++.+++++.....+|+++++|.|
T Consensus 194 --------------------------------~~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~v 239 (452)
T 2cdu_A 194 --------------------------------TDILAKDYEA-HG-VNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIA 239 (452)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEEESSCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEE
Confidence 0122233322 23 3477899999998766666533347889999999
Q ss_pred EEecCCchhh
Q 006025 237 IGADGIWSKV 246 (664)
Q Consensus 237 VgADG~~S~v 246 (664)
|.|.|.....
T Consensus 240 v~a~G~~p~~ 249 (452)
T 2cdu_A 240 ILCIGFRPNT 249 (452)
T ss_dssp EECCCEEECC
T ss_pred EECcCCCCCH
Confidence 9999987553
No 262
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.32 E-value=0.00013 Score=78.75 Aligned_cols=33 Identities=42% Similarity=0.612 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+||+||||||+|+++|..|++.|++|+|+|+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 699999999999999999999999999999874
No 263
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.32 E-value=0.0015 Score=71.19 Aligned_cols=99 Identities=26% Similarity=0.317 Sum_probs=70.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.... .++..+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 241 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG--------------------GMDGEV---------------- 241 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS--------------------SSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc--------------------cCCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcC---C--cEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLEN---G--QCY 231 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~---g--~~i 231 (664)
...+.+.|.+ .+ ..++.+++|++++.+++.+.+++.+ | +++
T Consensus 242 --------------------------------~~~l~~~l~~-~g-V~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i 287 (491)
T 3urh_A 242 --------------------------------AKQLQRMLTK-QG-IDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTL 287 (491)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSEEEEEEEEETTEEEEEEEETTSCCCEEE
T ss_pred --------------------------------HHHHHHHHHh-CC-CEEEECCeEEEEEEeCCEEEEEEEecCCCceEEE
Confidence 0122233322 22 3477889999999888888887763 5 589
Q ss_pred eccEEEEecCCchh
Q 006025 232 AGDLLIGADGIWSK 245 (664)
Q Consensus 232 ~adlvVgADG~~S~ 245 (664)
++|.||.|.|....
T Consensus 288 ~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 288 DAEVVLIATGRKPS 301 (491)
T ss_dssp EESEEEECCCCEEC
T ss_pred EcCEEEEeeCCccC
Confidence 99999999997643
No 264
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.29 E-value=0.00014 Score=78.64 Aligned_cols=34 Identities=32% Similarity=0.569 Sum_probs=31.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999984
No 265
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.27 E-value=0.0018 Score=70.55 Aligned_cols=100 Identities=20% Similarity=0.244 Sum_probs=70.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHH----cCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKR----KGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTG 152 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~----~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~ 152 (664)
..+|+|||||+.|+.+|..|++ .|.+|+++++.+.... . .++ .++
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~---~----------------~l~----~~~-------- 228 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG---K----------------ILP----EYL-------- 228 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT---T----------------TSC----HHH--------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc---c----------------cCC----HHH--------
Confidence 4689999999999999999987 4889999987532100 0 000 000
Q ss_pred ccccccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEe
Q 006025 153 DRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA 232 (664)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~ 232 (664)
...+.+.|.+ .+ ..++.+++|++++.+++.+.|++.+|+++.
T Consensus 229 ------------------------------------~~~~~~~l~~-~G-V~v~~~~~V~~i~~~~~~~~v~l~dG~~i~ 270 (493)
T 1m6i_A 229 ------------------------------------SNWTMEKVRR-EG-VKVMPNAIVQSVGVSSGKLLIKLKDGRKVE 270 (493)
T ss_dssp ------------------------------------HHHHHHHHHT-TT-CEEECSCCEEEEEEETTEEEEEETTSCEEE
T ss_pred ------------------------------------HHHHHHHHHh-cC-CEEEeCCEEEEEEecCCeEEEEECCCCEEE
Confidence 0012222222 23 347889999999877777889999999999
Q ss_pred ccEEEEecCCchh
Q 006025 233 GDLLIGADGIWSK 245 (664)
Q Consensus 233 adlvVgADG~~S~ 245 (664)
+|+||.|.|....
T Consensus 271 aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 271 TDHIVAAVGLEPN 283 (493)
T ss_dssp ESEEEECCCEEEC
T ss_pred CCEEEECCCCCcc
Confidence 9999999998654
No 266
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.27 E-value=0.0021 Score=69.19 Aligned_cols=98 Identities=18% Similarity=0.124 Sum_probs=69.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||..|+.+|..|++.|.+|+++++.+..... .++..+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~d~~~~--------------- 192 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK-------------------YFDKEMV--------------- 192 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-------------------TCCHHHH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc-------------------cCCHHHH---------------
Confidence 468999999999999999999999999999986421100 0000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
..+.+.|.+ ....++.+++|++++..++++.|.+++| ++++|.|
T Consensus 193 ---------------------------------~~l~~~l~~--~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~V 236 (452)
T 3oc4_A 193 ---------------------------------AEVQKSLEK--QAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSG 236 (452)
T ss_dssp ---------------------------------HHHHHHHHT--TTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEE
T ss_pred ---------------------------------HHHHHHHHH--cCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEE
Confidence 112222222 1234778999999987777788888777 8999999
Q ss_pred EEecCCch
Q 006025 237 IGADGIWS 244 (664)
Q Consensus 237 VgADG~~S 244 (664)
|.|.|...
T Consensus 237 v~A~G~~p 244 (452)
T 3oc4_A 237 IFALNLHP 244 (452)
T ss_dssp EECSCCBC
T ss_pred EECcCCCC
Confidence 99999854
No 267
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.26 E-value=0.0018 Score=70.02 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=70.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++|+.+.... ++..+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------~~~~~---------------- 218 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR---------------------EDPAI---------------- 218 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT---------------------SCHHH----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC---------------------CCHHH----------------
Confidence 46899999999999999999999999999998642110 00000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++.+++.+.|+++ +.++++|.|
T Consensus 219 --------------------------------~~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~V 263 (467)
T 1zk7_A 219 --------------------------------GEAVTAAFRA-EG-IEVLEHTQASQVAHMDGEFVLTTT-HGELRADKL 263 (467)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEETTCCEEEEEEETTEEEEEET-TEEEEESEE
T ss_pred --------------------------------HHHHHHHHHh-CC-CEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEE
Confidence 0122233322 23 347788999999887777777776 568999999
Q ss_pred EEecCCchhh
Q 006025 237 IGADGIWSKV 246 (664)
Q Consensus 237 VgADG~~S~v 246 (664)
|.|.|..+..
T Consensus 264 v~a~G~~p~~ 273 (467)
T 1zk7_A 264 LVATGRTPNT 273 (467)
T ss_dssp EECSCEEESC
T ss_pred EECCCCCcCC
Confidence 9999987654
No 268
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.24 E-value=0.002 Score=69.85 Aligned_cols=99 Identities=29% Similarity=0.242 Sum_probs=71.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 223 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP--------------------AVDEQV---------------- 223 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCC---cEEec
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENG---QCYAG 233 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g---~~i~a 233 (664)
...+.+.|.+ . ...++.+++|++++.+++.+.+++.++ +++++
T Consensus 224 --------------------------------~~~l~~~l~~-~-Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~ 269 (476)
T 3lad_A 224 --------------------------------AKEAQKILTK-Q-GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAF 269 (476)
T ss_dssp --------------------------------HHHHHHHHHH-T-TEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEE
T ss_pred --------------------------------HHHHHHHHHh-C-CCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEEC
Confidence 0122333322 1 234778999999998888888888765 68999
Q ss_pred cEEEEecCCchh
Q 006025 234 DLLIGADGIWSK 245 (664)
Q Consensus 234 dlvVgADG~~S~ 245 (664)
|.||.|-|....
T Consensus 270 D~vi~a~G~~p~ 281 (476)
T 3lad_A 270 DKLIVAVGRRPV 281 (476)
T ss_dssp SEEEECSCEEEC
T ss_pred CEEEEeeCCccc
Confidence 999999997643
No 269
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.23 E-value=0.0018 Score=70.24 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=32.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 45789999999999999999999999999999864
No 270
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.22 E-value=0.00019 Score=78.18 Aligned_cols=32 Identities=28% Similarity=0.381 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHH-cCCeEEEEcc
Q 006025 77 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 108 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~ 108 (664)
.+||+||||||+|+++|+.|++ .|++|+|+|+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5799999999999999999999 9999999994
No 271
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.19 E-value=0.00019 Score=78.22 Aligned_cols=33 Identities=33% Similarity=0.468 Sum_probs=31.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH-cCCeEEEEcc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEK 108 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~ 108 (664)
..+||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 35899999999999999999999 9999999994
No 272
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.17 E-value=0.0027 Score=69.09 Aligned_cols=35 Identities=34% Similarity=0.406 Sum_probs=32.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+|+|||||+.|+.+|..|++.|.+|+|+|+.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 35689999999999999999999999999999864
No 273
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.17 E-value=0.00024 Score=79.52 Aligned_cols=35 Identities=29% Similarity=0.463 Sum_probs=32.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
...+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999974
No 274
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.16 E-value=0.0023 Score=65.05 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 4689999999999999999999999999999863
No 275
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.13 E-value=0.00029 Score=77.92 Aligned_cols=35 Identities=26% Similarity=0.455 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|++|||+|++|+++|..|++.|++|+|+|+..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 46899999999999999999999999999999975
No 276
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.12 E-value=0.00038 Score=78.71 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=33.2
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+||+|||||++|+++|..|++.|++|+|+|+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~ 140 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 140 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 446799999999999999999999999999999875
No 277
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.11 E-value=0.00026 Score=76.32 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=32.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH-c------CCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKR-K------GFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~-~------g~~~~~~~~~~~ 111 (664)
.++||+||||||+|+.+|..|++ . |++|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 35799999999999999999999 7 999999999753
No 278
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.10 E-value=0.0026 Score=68.63 Aligned_cols=98 Identities=22% Similarity=0.292 Sum_probs=70.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~--------------------~~~~~~---------------- 213 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS--------------------RFDQDM---------------- 213 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc--------------------ccCHHH----------------
Confidence 56899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCe-EEEE-EcCCcEEecc
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK-VSVV-LENGQCYAGD 234 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~-v~v~-~~~g~~i~ad 234 (664)
...+.+.|.+ .+ ..++.+++|++++.++++ +.|+ +.+|+ +++|
T Consensus 214 --------------------------------~~~l~~~l~~-~G-v~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD 258 (463)
T 4dna_A 214 --------------------------------RRGLHAAMEE-KG-IRILCEDIIQSVSADADGRRVATTMKHGE-IVAD 258 (463)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSCCEEEEEECTTSCEEEEESSSCE-EEES
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeC
Confidence 0122233322 23 347788999999887655 6788 88888 9999
Q ss_pred EEEEecCCchh
Q 006025 235 LLIGADGIWSK 245 (664)
Q Consensus 235 lvVgADG~~S~ 245 (664)
.||.|-|....
T Consensus 259 ~Vv~a~G~~p~ 269 (463)
T 4dna_A 259 QVMLALGRMPN 269 (463)
T ss_dssp EEEECSCEEES
T ss_pred EEEEeeCcccC
Confidence 99999998654
No 279
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.08 E-value=0.00049 Score=79.39 Aligned_cols=37 Identities=24% Similarity=0.446 Sum_probs=33.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...++|+|||||++||++|+.|+++|++|+|+|+...
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 3467999999999999999999999999999998753
No 280
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.05 E-value=0.0016 Score=67.90 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|+|||||++|+.+|..|++.|.+|+++|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 689999999999999999999999999999864
No 281
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.05 E-value=0.0032 Score=63.64 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 4689999999999999999999999999999763
No 282
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.05 E-value=0.0031 Score=65.51 Aligned_cols=107 Identities=16% Similarity=0.208 Sum_probs=68.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||.+|+.+|..|++.|.+|+++++.+.... + ..+ . .+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~------------~-------~~d---------~------~~~ 211 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND------------P-------DAD---------P------SVR 211 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------C------TTS
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC------------C-------CCC---------C------Ccc
Confidence 35899999999999999999999999999998642110 0 000 0 000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEe-ccE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYA-GDL 235 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~-adl 235 (664)
+. . -.+..+.+.|.+ .+...++.+++|++++.+++.+.|++.+|+.+. +|.
T Consensus 212 -------------~~-----~---------~~~~~l~~~l~~-~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~ 263 (369)
T 3d1c_A 212 -------------LS-----P---------YTRQRLGNVIKQ-GARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHE 263 (369)
T ss_dssp -------------CC-----H---------HHHHHHHHHHHT-TCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSC
T ss_pred -------------CC-----H---------HHHHHHHHHHhh-CCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCc
Confidence 00 0 001123333322 122447788999999877778888899997765 599
Q ss_pred EEEecCCchh
Q 006025 236 LIGADGIWSK 245 (664)
Q Consensus 236 vVgADG~~S~ 245 (664)
||.|.|....
T Consensus 264 vi~a~G~~~~ 273 (369)
T 3d1c_A 264 PILATGFDAT 273 (369)
T ss_dssp CEECCCBCGG
T ss_pred eEEeeccCCc
Confidence 9999997654
No 283
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.04 E-value=0.0017 Score=66.41 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~ 206 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD 206 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999999864
No 284
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.02 E-value=0.00044 Score=74.91 Aligned_cols=55 Identities=18% Similarity=0.141 Sum_probs=44.5
Q ss_pred HHHHHHHHhcC----------CceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCchh
Q 006025 191 TLQQILAKAVG----------DEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWSK 245 (664)
Q Consensus 191 ~l~~~L~~~~~----------~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S~ 245 (664)
.|.+.|.+.+. ...++.+++|++|+.++++++|++.+|++++||.||.|.+....
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l 271 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVL 271 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHh
Confidence 45566666542 12488999999999988899999999999999999999997543
No 285
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.00 E-value=0.0037 Score=67.68 Aligned_cols=99 Identities=20% Similarity=0.129 Sum_probs=68.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||..|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~d~~~---------------- 230 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR--------------------SFDSMI---------------- 230 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--------------------TSCHHH----------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc--------------------ccCHHH----------------
Confidence 46899999999999999999999999999998643110 010000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCe--EEEEEcC---C---
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDK--VSVVLEN---G--- 228 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~--v~v~~~~---g--- 228 (664)
...+.+.|.+ .+ ..++.+++|++++.++++ +.+.+.+ |
T Consensus 231 --------------------------------~~~~~~~l~~-~g-v~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~ 276 (478)
T 3dk9_A 231 --------------------------------STNCTEELEN-AG-VEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVM 276 (478)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEETTEEEEEEEECSSSEEEEEEECCTTSCCEE
T ss_pred --------------------------------HHHHHHHHHH-CC-CEEEeCCEEEEEEEcCCCcEEEEEEccCCCCccc
Confidence 0122233322 22 347788899999876555 6677765 2
Q ss_pred -cEEeccEEEEecCCchh
Q 006025 229 -QCYAGDLLIGADGIWSK 245 (664)
Q Consensus 229 -~~i~adlvVgADG~~S~ 245 (664)
+++++|.||.|-|....
T Consensus 277 g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 277 TMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp EEEEEESEEEECSCEEES
T ss_pred ceEEEcCEEEEeeccccC
Confidence 57999999999997643
No 286
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.99 E-value=0.0034 Score=67.42 Aligned_cols=98 Identities=22% Similarity=0.312 Sum_probs=67.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++++.+..... .++..+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------~~~~~~---------------- 192 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR-------------------SFDKEV---------------- 192 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-------------------hcCHHH----------------
Confidence 358999999999999999999999999999986421100 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+. ..++.+++|.+++.++ .+...+.+++++++|.|
T Consensus 193 --------------------------------~~~l~~~l~~~---v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~V 236 (449)
T 3kd9_A 193 --------------------------------TDILEEKLKKH---VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELV 236 (449)
T ss_dssp --------------------------------HHHHHHHHTTT---SEEEESCCEEEEECSS-SCCEEEETTEEEECSEE
T ss_pred --------------------------------HHHHHHHHHhC---cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEE
Confidence 01222223222 3467788999887654 45444667889999999
Q ss_pred EEecCCchh
Q 006025 237 IGADGIWSK 245 (664)
Q Consensus 237 VgADG~~S~ 245 (664)
|.|-|....
T Consensus 237 v~a~G~~p~ 245 (449)
T 3kd9_A 237 ILATGIKPN 245 (449)
T ss_dssp EECSCEEEC
T ss_pred EEeeCCccC
Confidence 999997643
No 287
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.99 E-value=0.0034 Score=69.92 Aligned_cols=98 Identities=22% Similarity=0.331 Sum_probs=68.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||..|+.+|..|++.|.+|+++++.+.... .++..+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------~~~~~~---------------- 230 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP--------------------PIDYEM---------------- 230 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--------------------TSCHHH----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc--------------------cCCHHH----------------
Confidence 46899999999999999999999999999998642110 000000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEE
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGDKVSVVLENGQCYAGDLL 236 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlv 236 (664)
...+.+.|.+ .+ ..++.+++|++++.++++ |++.+|+++++|.|
T Consensus 231 --------------------------------~~~l~~~l~~-~G-V~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~V 274 (588)
T 3ics_A 231 --------------------------------AAYVHEHMKN-HD-VELVFEDGVDALEENGAV--VRLKSGSVIQTDML 274 (588)
T ss_dssp --------------------------------HHHHHHHHHH-TT-CEEECSCCEEEEEGGGTE--EEETTSCEEECSEE
T ss_pred --------------------------------HHHHHHHHHH-cC-CEEEECCeEEEEecCCCE--EEECCCCEEEcCEE
Confidence 0122222222 22 347778999999866553 66788999999999
Q ss_pred EEecCCchhh
Q 006025 237 IGADGIWSKV 246 (664)
Q Consensus 237 VgADG~~S~v 246 (664)
|.|.|.....
T Consensus 275 i~a~G~~p~~ 284 (588)
T 3ics_A 275 ILAIGVQPES 284 (588)
T ss_dssp EECSCEEECC
T ss_pred EEccCCCCCh
Confidence 9999986543
No 288
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.96 E-value=0.0041 Score=66.52 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=31.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 4589999999999999999999999999999864
No 289
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.96 E-value=0.00055 Score=73.83 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcC--CeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~~ 111 (664)
.+++|+||||||+|+.+|..|++.| ++|+|||+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 3579999999999999999999999 99999999754
No 290
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.93 E-value=0.00054 Score=81.39 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=32.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
..+||+||||||||+++|..|++.|+ +|+|||+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 46799999999999999999999999 799999864
No 291
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.91 E-value=0.00044 Score=76.01 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=31.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHH-cCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~~~ 110 (664)
..||+||||+|++|+.+|..|++ .|++|+|+|+..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 46999999999999999999998 689999999875
No 292
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.87 E-value=0.00059 Score=80.45 Aligned_cols=36 Identities=31% Similarity=0.493 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+||+||||||||+++|..|++.|++|+|||+.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~ 162 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 357999999999999999999999999999998753
No 293
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.82 E-value=0.0072 Score=65.49 Aligned_cols=97 Identities=24% Similarity=0.240 Sum_probs=66.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCccccCCCCcccceeeCchHHHHHHhcChhHHHHHHHhccccCcccc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN 156 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~L~~l~~g~~~~~~~~~~~~~~~~~ 156 (664)
..+|+|||||+.|+.+|..|++.|.+|+++++.. ... .++..+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l~--------------------~~d~~~~--------------- 230 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI-VLR--------------------GFDQQMA--------------- 230 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-SST--------------------TSCHHHH---------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-CCc--------------------ccCHHHH---------------
Confidence 4579999999999999999999999999998742 100 0100000
Q ss_pred ccccCCCCceeeeccCCCcccccCCCeEEeeCHHHHHHHHHHhcCCceEEeCCeEEEEEeeCC-eEEEEEcCCc-----E
Q 006025 157 GLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNESNVIDFKDHGD-KVSVVLENGQ-----C 230 (664)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~v~~~~~-~v~v~~~~g~-----~ 230 (664)
..+.+.|.+ .+. .++.+++|++++.+++ .+.|++.+++ +
T Consensus 231 ---------------------------------~~l~~~l~~-~Gv-~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~ 275 (483)
T 3dgh_A 231 ---------------------------------ELVAASMEE-RGI-PFLRKTVPLSVEKQDDGKLLVKYKNVETGEESE 275 (483)
T ss_dssp ---------------------------------HHHHHHHHH-TTC-CEEETEEEEEEEECTTSCEEEEEEETTTCCEEE
T ss_pred ---------------------------------HHHHHHHHh-CCC-EEEeCCEEEEEEEcCCCcEEEEEecCCCCceeE
Confidence 122233322 233 3778899999987544 4777776653 7
Q ss_pred EeccEEEEecCCch
Q 006025 231 YAGDLLIGADGIWS 244 (664)
Q Consensus 231 i~adlvVgADG~~S 244 (664)
+.+|.||.|.|...
T Consensus 276 ~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 276 DVYDTVLWAIGRKG 289 (483)
T ss_dssp EEESEEEECSCEEE
T ss_pred EEcCEEEECccccc
Confidence 99999999999754
No 294
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.80 E-value=0.00044 Score=76.11 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+|+||||||.+|+++|..|++ |.+|+|+|+...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 45899999999999999999999 999999999753
No 295
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.80 E-value=0.0007 Score=74.90 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcC-CeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g-~~~~~~~~~~~ 111 (664)
..+|+||||||.||+++|..|++.| ++|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4689999999999999999999998 79999999764
No 296
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.64 E-value=0.012 Score=64.73 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...+|+|||+|..|+.+|..|++.|.+|++++|.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 356899999999999999999999999999999864
No 297
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.64 E-value=0.0015 Score=71.31 Aligned_cols=36 Identities=31% Similarity=0.477 Sum_probs=33.4
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+|++|||+|++|+++|..|++.|.+|+|+|+..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 456899999999999999999999999999999875
No 298
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.63 E-value=0.001 Score=73.53 Aligned_cols=35 Identities=31% Similarity=0.556 Sum_probs=32.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc-CCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~ 110 (664)
..||+||||||.||+++|..|++. |++|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 89999999976
No 299
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.62 E-value=0.007 Score=61.85 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=31.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999999864
No 300
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.61 E-value=0.011 Score=64.06 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+|+|||||+.|+.+|..|++.|.+|+++++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 457999999999999999999999999999875
No 301
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.61 E-value=0.013 Score=59.08 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 4689999999999999999999999999999764
No 302
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.60 E-value=0.0067 Score=61.23 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 4689999999999999999999999999999864
No 303
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.60 E-value=0.01 Score=60.46 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3689999999999999999999999999999863
No 304
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.57 E-value=0.0014 Score=71.49 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=32.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|++|||+|++|+++|..|++.|++|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999999999875
No 305
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.55 E-value=0.0063 Score=63.03 Aligned_cols=34 Identities=18% Similarity=0.380 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4689999999999999999999999999999864
No 306
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.52 E-value=0.0094 Score=60.32 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 4689999999999999999999999999999864
No 307
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.51 E-value=0.0093 Score=60.84 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=31.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|..|+.+|..|++.|.+|+++++.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 4689999999999999999999999999999864
No 308
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.35 E-value=0.0013 Score=72.67 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=32.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHH-cCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~~~~ 111 (664)
.+|+||||||.||+++|..|++ .|++|+|+|+.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCc
Confidence 4899999999999999999998 7999999998753
No 309
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.35 E-value=0.0023 Score=71.13 Aligned_cols=37 Identities=35% Similarity=0.561 Sum_probs=33.6
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHH-cCCeEEEEccCCc
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKR-KGFEVLVFEKDMS 111 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~~~~~ 111 (664)
+..+|++|||+|++|+++|..|++ .|++|+|+|+...
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 356899999999999999999999 8999999998753
No 310
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.23 E-value=0.013 Score=60.02 Aligned_cols=34 Identities=24% Similarity=0.181 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 4689999999999999999999999999999763
No 311
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.21 E-value=0.027 Score=57.00 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 3689999999999999999999999999999753
No 312
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.20 E-value=0.0049 Score=67.80 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...+|+|||+|.+|+.+|..|++.+.+|+|++|.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 356899999999999999999999999999999864
No 313
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.18 E-value=0.0028 Score=69.88 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=32.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHc-CCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~ 110 (664)
..+|++|||+|++|+++|..|++. |.+|+|+|+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 468999999999999999999998 99999999974
No 314
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.02 E-value=0.019 Score=62.48 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=28.0
Q ss_pred CcEEEEccCcCcCCCCCccchhHHHHHHHHHHHHHHHHh
Q 006025 363 GRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 401 (664)
Q Consensus 363 ~rv~LvGDAAh~~~P~~GqG~n~al~Da~~La~~L~~~~ 401 (664)
++|+.+||+|..-.|-.+| .|.+.|..+|+.|....
T Consensus 365 ~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 365 NNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp SSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHHHh
Confidence 5799999998876666665 58888888888887653
No 315
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.01 E-value=0.05 Score=59.36 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=30.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+|+|||||..|+.+|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 356999999999999999999999999999974
No 316
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.98 E-value=0.014 Score=62.52 Aligned_cols=33 Identities=12% Similarity=0.007 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCe-EEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFE-VLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~-~~~~~~~ 109 (664)
..+|+|||||.+|+-+|..|++.|.+ |+|+++.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 245 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC
Confidence 46899999999999999999999999 9999986
No 317
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.90 E-value=0.053 Score=60.30 Aligned_cols=33 Identities=24% Similarity=0.136 Sum_probs=30.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+|+|||||..|+.+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999975
No 318
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.86 E-value=0.0098 Score=52.45 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=32.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
+.+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999998753
No 319
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.73 E-value=0.011 Score=53.04 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 45799999999999999999999999999998754
No 320
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.73 E-value=0.0088 Score=66.32 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=33.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..|||+|||+|+.|..+|..|++.|.+|+++||+..
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~ 42 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSY 42 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCc
Confidence 369999999999999999999999999999999863
No 321
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.68 E-value=0.02 Score=63.02 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...+|+|||+|.+|+.+|..|++.|.+|++++|.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 356899999999999999999999999999999864
No 322
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.56 E-value=0.011 Score=51.98 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..|+|+|+|..|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 323
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.53 E-value=0.036 Score=56.22 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4689999999999999999999999999999763
No 324
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.49 E-value=0.16 Score=55.13 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=30.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (664)
.++|+|||+|-+|.-.|..|+++ +.+|+++=|.+
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 45799999999999999999876 77999998875
No 325
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.43 E-value=0.042 Score=54.67 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=29.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+|+|||+|+.|+.+|..|++.| +|+++++.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~ 172 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNG 172 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECC
Confidence 468999999999999999999999 99999865
No 326
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.40 E-value=0.016 Score=50.68 Aligned_cols=33 Identities=27% Similarity=0.502 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 327
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.35 E-value=0.018 Score=51.54 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+.+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999863
No 328
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.32 E-value=0.045 Score=59.76 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||||..|+.+|..|++.|.+|+++++.+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 4689999999999999999999999999999763
No 329
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.93 E-value=0.024 Score=47.78 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-CeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g-~~~~~~~~~~ 110 (664)
.+|+|+|+|..|..++..|.+.| ++|+++++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 9999999864
No 330
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.91 E-value=0.017 Score=59.27 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=30.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|..|+.+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999999 799998864
No 331
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=94.91 E-value=0.065 Score=60.73 Aligned_cols=34 Identities=24% Similarity=0.207 Sum_probs=31.0
Q ss_pred cCcEEEEC--CCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAG--GGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g--~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+||| +|.+|+.+|..|++.|.+|+++++.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 35799999 99999999999999999999999763
No 332
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.84 E-value=0.02 Score=57.78 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=31.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 3589999999999999999999999999999864
No 333
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.50 E-value=0.029 Score=58.73 Aligned_cols=35 Identities=26% Similarity=0.203 Sum_probs=32.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEY 180 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 46899999999999999999999999999998753
No 334
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=94.49 E-value=0.17 Score=54.16 Aligned_cols=34 Identities=26% Similarity=0.289 Sum_probs=29.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc--------------------CC-eEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK--------------------GF-EVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~--------------------g~-~~~~~~~~~ 110 (664)
..+|+|||+|.+|+.+|..|++. |. +|+|+++..
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 46899999999999999999974 65 899999875
No 335
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.47 E-value=0.032 Score=48.81 Aligned_cols=33 Identities=27% Similarity=0.248 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..|+|+|+|..|..+|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 336
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.33 E-value=0.039 Score=50.93 Aligned_cols=34 Identities=21% Similarity=0.103 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc-CCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK-GFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~-g~~~~~~~~~~ 110 (664)
..+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 337
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.31 E-value=0.032 Score=56.15 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=31.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||||..|+.+|..|++.|.+|+|+++..
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999864
No 338
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.89 E-value=0.058 Score=54.26 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 339
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.86 E-value=0.046 Score=55.19 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||+|..|...|..++..|++|+++|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999764
No 340
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.75 E-value=0.043 Score=52.31 Aligned_cols=33 Identities=18% Similarity=0.443 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998753
No 341
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=93.71 E-value=0.21 Score=56.34 Aligned_cols=29 Identities=17% Similarity=0.124 Sum_probs=26.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEE
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLV 105 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~ 105 (664)
..+|+|||||..|+.+|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 46899999999999999999999987764
No 342
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.63 E-value=0.053 Score=54.98 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 343
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.59 E-value=0.076 Score=54.16 Aligned_cols=34 Identities=12% Similarity=0.335 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
+.+|+|||+|-.|..+|..|+..|+ +|+++|++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999864
No 344
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=93.54 E-value=0.18 Score=57.49 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=31.2
Q ss_pred cCcEEEEC--CCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAG--GGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g--~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+||| ||..|+.+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 45899999 99999999999999999999999863
No 345
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.49 E-value=0.078 Score=52.78 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999874
No 346
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.32 E-value=0.073 Score=56.92 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=32.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+|.|||.|.+|+++|..|+++|++|++.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34689999999999999999999999999999864
No 347
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.05 E-value=0.57 Score=55.47 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
.+|+|||||..|+.+|..|++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999997 899999874
No 348
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.04 E-value=0.057 Score=57.54 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
.++|+|||.|.+|+++|..|+++|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 35799999999999999999999999999998653
No 349
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.00 E-value=0.23 Score=58.47 Aligned_cols=33 Identities=21% Similarity=0.103 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|+|||+|+.|+.+|..|++.|.+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 579999999999999999999999999999864
No 350
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.90 E-value=0.093 Score=53.26 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
++|+|||+|-.|.++|..|++.|++|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999986
No 351
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.79 E-value=0.074 Score=50.68 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=32.4
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 74 ENKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 74 ~~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
......|+|||||.+|...|..|.+.|.+|+|++..
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 445678999999999999999999999999999864
No 352
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.68 E-value=0.1 Score=53.38 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
++|.|||+|-.|.++|..|++.|++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999974
No 353
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.63 E-value=0.1 Score=53.79 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=32.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..++|.|||+|-.|.++|..|++.|++|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 35689999999999999999999999999999863
No 354
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.52 E-value=0.13 Score=48.65 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+|.|||+|-.|.++|..|++.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999998753
No 355
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.49 E-value=0.11 Score=52.49 Aligned_cols=33 Identities=27% Similarity=0.482 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
++|+|||+|-.|..+|..|++.|+ +|+++|+..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999999 999999863
No 356
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.47 E-value=0.073 Score=52.39 Aligned_cols=34 Identities=32% Similarity=0.444 Sum_probs=31.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+.|+|||||.+|+..|..|.+.|.+|+|++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4568999999999999999999999999999864
No 357
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.46 E-value=0.11 Score=55.88 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=31.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.++|.|||.|-.|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 358
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.40 E-value=0.14 Score=51.75 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=31.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (664)
...+|.|||+|..|..+|..|+..|+ +|+++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 45689999999999999999999999 99999986
No 359
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.30 E-value=0.13 Score=51.16 Aligned_cols=32 Identities=28% Similarity=0.323 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999875
No 360
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.28 E-value=0.15 Score=51.52 Aligned_cols=35 Identities=26% Similarity=0.488 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+|.|||.|..|..+|..|++.|++|+++|+.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999998753
No 361
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.16 E-value=0.16 Score=53.61 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=31.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+|.|||.|-+||.+|..|++.|++|+.+|-++.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 45899999999999999999999999999997653
No 362
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.10 E-value=0.14 Score=51.79 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=31.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
..+|.|||+|-.|..+|..|++.|+ +|+++|+..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3579999999999999999999999 999999864
No 363
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.09 E-value=0.13 Score=51.72 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|.|||+|..|..+|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999863
No 364
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.08 E-value=0.11 Score=52.53 Aligned_cols=32 Identities=31% Similarity=0.517 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
++|+|||+|-.|.++|..|++.|++|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999985
No 365
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.89 E-value=0.14 Score=52.59 Aligned_cols=34 Identities=35% Similarity=0.401 Sum_probs=31.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.++|.|||+|-.|...|..|++.|++|+++++.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3589999999999999999999999999999863
No 366
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.89 E-value=0.06 Score=57.64 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=32.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
.++|+|+|+|-.|..+|..|...|++|+|+|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999998754
No 367
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.87 E-value=0.16 Score=52.75 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|+|+|++|+.+|..|...|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999874
No 368
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.86 E-value=0.17 Score=51.54 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
.+|.|||+|-.|..+|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999999 999999864
No 369
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.65 E-value=0.15 Score=54.29 Aligned_cols=34 Identities=35% Similarity=0.366 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
++|.|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 4799999999999999999999999999998753
No 370
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.60 E-value=0.15 Score=54.43 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=32.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHc-CC-eEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRK-GF-EVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~-g~-~~~~~~~~~~ 111 (664)
.++|.|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35899999999999999999999 99 9999998764
No 371
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.57 E-value=0.19 Score=50.90 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=31.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
+..+|.|||+|..|.++|..|+..|+ +|+++|...
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 45689999999999999999999999 999999864
No 372
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.55 E-value=0.19 Score=48.23 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=31.6
Q ss_pred CCcCcEEEECC-CHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+.|+|.|| |..|..+|..|+++|++|+++.|..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 34568999998 9999999999999999999999874
No 373
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.49 E-value=0.17 Score=51.51 Aligned_cols=33 Identities=33% Similarity=0.303 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHH-HHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLV-FALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~-~a~~l~~~g~~~~~~~~~~ 110 (664)
++|.|||.|.+|++ +|..|.++|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 57999999999996 8999999999999999864
No 374
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.47 E-value=0.18 Score=53.54 Aligned_cols=35 Identities=34% Similarity=0.464 Sum_probs=32.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..++.|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999764
No 375
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.42 E-value=0.2 Score=50.69 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
.+|.|||+|-.|..+|..|+..|+ +|.++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 589999999999999999999999 999999763
No 376
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.41 E-value=0.23 Score=52.67 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
-.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 3579999999999999999999999999999874
No 377
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.40 E-value=0.17 Score=52.11 Aligned_cols=35 Identities=31% Similarity=0.359 Sum_probs=32.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+|+|+|+|.+|+.+|..|...|.+|+++|+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999874
No 378
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.40 E-value=0.18 Score=50.69 Aligned_cols=32 Identities=28% Similarity=0.442 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
+|+|||+|-.|..+|..|+..|+ +|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999863
No 379
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.38 E-value=0.22 Score=50.32 Aligned_cols=35 Identities=26% Similarity=0.487 Sum_probs=31.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
...+|.|||.|..|.++|..|++.|+ +|+++|+.+
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34689999999999999999999999 999999864
No 380
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.25 E-value=0.17 Score=50.48 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=30.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+++|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4578999999999999999999 999999999864
No 381
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.16 E-value=0.17 Score=51.05 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=30.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (664)
...+|.|||.|..|..+|..|++.|+ +|+++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999999 99999986
No 382
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.09 E-value=0.18 Score=50.57 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||.|-.|..+|..|++.|++|+++++.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 383
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.06 E-value=0.22 Score=49.59 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
++|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998753
No 384
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.04 E-value=0.22 Score=48.30 Aligned_cols=36 Identities=31% Similarity=0.340 Sum_probs=32.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...+|.|||+|-.|..+|..|++.|++|+++++.+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 456899999999999999999999999999998753
No 385
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.91 E-value=0.15 Score=51.02 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|+|||+|-.|.++|..|++.|++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 386
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.89 E-value=0.27 Score=49.65 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999864
No 387
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.88 E-value=0.091 Score=46.27 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|..|..+|..|++.|++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4579999999999999999999999999999864
No 388
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.86 E-value=0.18 Score=53.97 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=31.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 4689999999999999999999999999999864
No 389
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.85 E-value=0.18 Score=52.94 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34799999999999999999999999999998753
No 390
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.82 E-value=0.2 Score=48.66 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=31.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
..+|+|||+|-.|..+|..|++.|+ +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4589999999999999999999998 899999874
No 391
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.72 E-value=0.18 Score=53.06 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
.++|.|||.|-.|+.+|..|++ |++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3589999999999999999998 999999998753
No 392
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.72 E-value=0.24 Score=50.23 Aligned_cols=33 Identities=24% Similarity=0.492 Sum_probs=30.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
..+|.|||+|..|.++|..|+..|+ +++++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4689999999999999999999998 89999975
No 393
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.69 E-value=0.27 Score=49.74 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=31.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
...+|.|||+|..|.++|..|+..|+ ++.++|...
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 34689999999999999999999998 999999864
No 394
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.63 E-value=0.23 Score=53.08 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3479999999999999999999999999999864
No 395
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.49 E-value=0.19 Score=53.32 Aligned_cols=32 Identities=31% Similarity=0.344 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 396
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.39 E-value=0.26 Score=49.83 Aligned_cols=34 Identities=15% Similarity=0.269 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
+.+|+|||+|-+|.++|..|+..|+ ++.++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999763
No 397
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.36 E-value=0.27 Score=46.59 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||+|-.|...|..|++.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 398
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.34 E-value=0.21 Score=50.55 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=31.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999874
No 399
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.32 E-value=0.18 Score=50.50 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||.|..|..+|..|++.|++|+++|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4589999999999999999999999999999875
No 400
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.21 E-value=0.27 Score=50.60 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=31.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..++|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 45689999999999999999999999999999874
No 401
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.17 E-value=0.26 Score=49.81 Aligned_cols=32 Identities=22% Similarity=0.458 Sum_probs=29.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
..+|.|||+|-.|.++|..|++.|++|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 357999999999999999999999999999 65
No 402
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.15 E-value=0.18 Score=48.01 Aligned_cols=33 Identities=12% Similarity=0.130 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEE-EccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLV-FEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~-~~~~~ 110 (664)
++|.|||+|-.|..+|..|++.|++|++ +++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999999 88764
No 403
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.14 E-value=0.27 Score=50.05 Aligned_cols=33 Identities=33% Similarity=0.591 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
+.+|.|||+|-.|.++|..|++.|++|++++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999986
No 404
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.13 E-value=0.28 Score=49.38 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHHc--CCeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRK--GFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~ 110 (664)
+|+|||+|-.|..+|..|++. |++|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999995 79999999864
No 405
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.05 E-value=0.27 Score=49.45 Aligned_cols=32 Identities=31% Similarity=0.391 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|+|||+|-.|.++|..|+ .|++|++++|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999863
No 406
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.01 E-value=0.1 Score=49.95 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=29.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEcc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~ 108 (664)
.++|.|||.|..|.++|..|++.|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 35899999999999999999999999999987
No 407
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.94 E-value=0.31 Score=48.15 Aligned_cols=34 Identities=32% Similarity=0.405 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
+.|+|.|+|..|..++..|.++|++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5799999999999999999999999999998753
No 408
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.86 E-value=0.31 Score=51.02 Aligned_cols=34 Identities=29% Similarity=0.425 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...|+|+|+|.+|+.+|..|...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 409
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.74 E-value=0.3 Score=52.46 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3479999999999999999999999999999874
No 410
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.63 E-value=0.22 Score=50.22 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHc-----C-CeEEEEcc
Q 006025 78 LRILVAGGGIGGLVFALAAKRK-----G-FEVLVFEK 108 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~-----g-~~~~~~~~ 108 (664)
++|.|||+|..|..+|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 411
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.59 E-value=0.31 Score=49.22 Aligned_cols=34 Identities=21% Similarity=0.474 Sum_probs=30.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
...+|+|||+|-+|.++|..|+.+|+ ++.++|..
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45689999999999999999999985 89999975
No 412
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.52 E-value=0.27 Score=49.92 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEcc
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEK 108 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~ 108 (664)
+|.|||+|..|..+|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 413
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.52 E-value=0.25 Score=49.12 Aligned_cols=33 Identities=30% Similarity=0.376 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998753
No 414
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.47 E-value=0.37 Score=48.64 Aligned_cols=34 Identities=24% Similarity=0.558 Sum_probs=30.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
...+|+|||+|..|.++|..|+..|+ +|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999886 89999976
No 415
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.44 E-value=0.34 Score=49.95 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...|+|+|+|.+|+.++..|+..|.+|+++++.+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999863
No 416
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.39 E-value=0.35 Score=51.65 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
...+|+|||||.+|+-+|..+.+.|. +|+++++..
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 35689999999999999999999998 599999874
No 417
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.35 E-value=0.36 Score=50.22 Aligned_cols=35 Identities=34% Similarity=0.421 Sum_probs=31.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+|+|+|+|.+|+.+|..|...|.+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999864
No 418
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.29 E-value=0.32 Score=49.53 Aligned_cols=39 Identities=28% Similarity=0.267 Sum_probs=30.8
Q ss_pred CCCCcCcEEEECC-CHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 73 SENKKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 73 ~~~~~~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
+....+.|+|.|| |..|..++..|.++|++|++++|...
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3445578999999 99999999999999999999998753
No 419
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.27 E-value=0.32 Score=48.49 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
+|.|||+|..|.++|..|+..|+ +|.++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 999999863
No 420
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.22 E-value=0.43 Score=47.90 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 421
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.05 E-value=0.48 Score=43.91 Aligned_cols=34 Identities=35% Similarity=0.507 Sum_probs=31.3
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
+.|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 57999999 99999999999999999999998754
No 422
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.94 E-value=0.31 Score=52.27 Aligned_cols=36 Identities=28% Similarity=0.426 Sum_probs=32.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+.+.+|.|||.|..|..+|..|++.|++|++++|.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 446689999999999999999999999999999874
No 423
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.85 E-value=0.4 Score=49.63 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=31.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
....|+|+|+|.+|+.+|..|+..|.+|+++|+.+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34689999999999999999999999999999763
No 424
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.85 E-value=0.41 Score=48.16 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
.+|.|||+|-.|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999763
No 425
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.82 E-value=0.35 Score=48.92 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
+|.|||+|-.|..+|..|++.|+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999863
No 426
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.73 E-value=0.57 Score=47.31 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=30.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
..+|.|||+|..|..+|..|+..|+ ++.++|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 4689999999999999999999998 89999975
No 427
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.69 E-value=0.39 Score=45.10 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=29.8
Q ss_pred cEEEEC-CCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g-~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|+|+| +|-.|..+|..|++.|++|++++|.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999999863
No 428
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.67 E-value=0.35 Score=47.72 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|+|.|+|..|..++..|.++|++|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999999864
No 429
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.62 E-value=0.45 Score=44.67 Aligned_cols=32 Identities=28% Similarity=0.419 Sum_probs=29.8
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|+|.|| |..|..++..|.++|++|+++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999875
No 430
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=88.59 E-value=1.4 Score=45.96 Aligned_cols=37 Identities=16% Similarity=0.292 Sum_probs=29.7
Q ss_pred eEEeCCeEEEEEeeCCeEEEEEcCCcEEeccEEEEecCCch
Q 006025 204 IILNESNVIDFKDHGDKVSVVLENGQCYAGDLLIGADGIWS 244 (664)
Q Consensus 204 ~i~~~~~v~~v~~~~~~v~v~~~~g~~i~adlvVgADG~~S 244 (664)
.++.+++|++++.+ + |++++|+++++|+||.|-|...
T Consensus 234 ~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 234 KLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp EEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEEC
T ss_pred EEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCc
Confidence 36778888888643 3 6778999999999999999754
No 431
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.58 E-value=0.36 Score=48.27 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|.|||.|..|...|..|++.|++|+++++.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999864
No 432
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.55 E-value=0.46 Score=46.75 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
...|+|+|+|-+|.++|..|++.|.+|++++|.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 457999999999999999999999999999876
No 433
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.54 E-value=0.3 Score=51.23 Aligned_cols=31 Identities=29% Similarity=0.317 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|.|||+|-.|+.+|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 434
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=88.50 E-value=0.41 Score=51.12 Aligned_cols=35 Identities=14% Similarity=0.048 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHH--------------------HcCC-eEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAK--------------------RKGF-EVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~--------------------~~g~-~~~~~~~~~~ 111 (664)
..+|+|||+|.+|+.+|..|+ +.|. +|+|+++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999 6788 7999998753
No 435
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.50 E-value=0.4 Score=46.74 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC----CeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g----~~~~~~~~~~~ 111 (664)
++|.|||+|-.|...|..|++.| ++|+++++.+.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999998753
No 436
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.37 E-value=0.43 Score=51.05 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=32.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+|.|||.|..|..+|..|++.|++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 437
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.36 E-value=0.37 Score=48.70 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-CeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g-~~~~~~~~~~ 110 (664)
.+|.|||.|-.|..+|..|++.| ++|+++++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999874
No 438
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=88.31 E-value=0.47 Score=47.21 Aligned_cols=33 Identities=30% Similarity=0.574 Sum_probs=30.3
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|+|.|| |..|..++..|.++||+|+++-|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 36999998 9999999999999999999998864
No 439
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.16 E-value=0.46 Score=46.81 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|.|||+|..|..+|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 68999999999999999999999999998763
No 440
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.09 E-value=0.21 Score=47.97 Aligned_cols=34 Identities=9% Similarity=0.094 Sum_probs=30.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4579999999999999999999999 999998753
No 441
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.05 E-value=0.47 Score=47.96 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=30.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
...+|+|||+|.+|.++|..|+..|+ ++.++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34689999999999999999999998 89999975
No 442
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.02 E-value=0.5 Score=44.56 Aligned_cols=32 Identities=38% Similarity=0.597 Sum_probs=29.9
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|+|.|| |..|..++..|.++|++|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999864
No 443
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.90 E-value=0.39 Score=51.46 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~ 111 (664)
++|.|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4799999999999999999999 899999998753
No 444
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.89 E-value=0.42 Score=51.32 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHc--CCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRK--GFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~--g~~~~~~~~~~~ 111 (664)
++|.|||.|-.|+.+|..|++. |++|+++|+++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4799999999999999999998 799999998653
No 445
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.83 E-value=0.43 Score=47.64 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||+|-.|...|..|++.|++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999864
No 446
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.82 E-value=0.47 Score=47.75 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
++|.|||+|..|..+|..|+..|+ ++.++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 369999999999999999999998 899999864
No 447
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.79 E-value=0.3 Score=50.08 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-------CeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g-------~~~~~~~~~~ 110 (664)
++|.|||+|-.|..+|..|++.| ++|+++++.+
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 47999999999999999999999 9999999864
No 448
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=87.76 E-value=0.42 Score=47.63 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|.|||+|..|...|..|++.|++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 449
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.76 E-value=0.44 Score=47.90 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC--CeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG--FEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g--~~~~~~~~~~ 110 (664)
++|.|||+|-.|..+|..|++.| ++|+++|+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 37999999999999999999999 7999999863
No 450
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.65 E-value=0.48 Score=46.23 Aligned_cols=32 Identities=16% Similarity=0.357 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcC-CeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKG-FEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g-~~~~~~~~~~ 110 (664)
+|.|||+|-.|...|..|++.| ++|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999863
No 451
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.64 E-value=0.53 Score=48.83 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=31.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
....|+|+|+|.+|+.+|..|...|.+|+++|+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35689999999999999999999999999999863
No 452
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.59 E-value=0.37 Score=50.76 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
.+..|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4689999999999999999999999999998754
No 453
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.52 E-value=0.52 Score=48.52 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
+.|+|+|||..|..+|..+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4799999999999999999999999999997653
No 454
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.50 E-value=0.5 Score=47.33 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
.+|.|||+|..|..+|..|+.+|+ +|.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 589999999999999999999999 999999864
No 455
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.44 E-value=0.6 Score=46.16 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=31.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC---eEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF---EVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~---~~~~~~~~~ 110 (664)
..+|.|||+|-.|.+.|..|.+.|+ +|+++|+++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999999 999999874
No 456
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.43 E-value=0.49 Score=47.29 Aligned_cols=33 Identities=21% Similarity=0.454 Sum_probs=30.5
Q ss_pred CcEEEEC-CCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAG-GGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g-~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|.||| .|-.|.++|..|++.|++|+++++.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4699999 99999999999999999999999764
No 457
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.42 E-value=0.53 Score=47.98 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|.|||.|..|.++|..|.+.|++|+++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 458
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=87.32 E-value=0.53 Score=48.40 Aligned_cols=34 Identities=32% Similarity=0.467 Sum_probs=31.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (664)
...+|+|+|||.||..+|..|...|. +|+++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45689999999999999999999999 99999986
No 459
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.25 E-value=0.65 Score=45.47 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999999864
No 460
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.20 E-value=0.56 Score=46.85 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
...|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4579999999999999999999998 999999863
No 461
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.06 E-value=0.52 Score=50.24 Aligned_cols=34 Identities=21% Similarity=0.110 Sum_probs=31.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~ 109 (664)
....|+|||||.+|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3568999999999999999999999999999864
No 462
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.01 E-value=0.67 Score=46.95 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=30.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
...+|.|||+|-+|.++|..|+.+|+ ++.|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 35689999999999999999999998 89999975
No 463
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.00 E-value=0.59 Score=50.33 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=32.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
..+|.|||.|..|..+|..|+++|++|++++|.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 45799999999999999999999999999998753
No 464
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.93 E-value=0.55 Score=46.59 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=31.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
...+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45689999999999999999999998 799999874
No 465
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=86.92 E-value=0.61 Score=46.00 Aligned_cols=32 Identities=28% Similarity=0.563 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--eEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGF--EVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~~ 110 (664)
+|.|||+|..|..+|..|++.|+ +|+++|+.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999999 999999763
No 466
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.85 E-value=0.52 Score=46.88 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|.|||+|-.|...|..|++.|++|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999999864
No 467
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.83 E-value=0.64 Score=46.90 Aligned_cols=34 Identities=21% Similarity=0.493 Sum_probs=30.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
++.+|+|||+|-+|.++|..|+..++ ++.++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34689999999999999999999987 89999975
No 468
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.81 E-value=0.73 Score=45.61 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=30.6
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|.|||+ |-.|..+|..|++.|++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999863
No 469
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=86.79 E-value=0.33 Score=50.15 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|.|||+|-.|..+|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999863
No 470
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.79 E-value=0.56 Score=47.41 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcC----CeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKG----FEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g----~~~~~~~~~~ 110 (664)
.++|.|||+|-.|..+|..|++.| ++|+++++.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 357999999999999999999999 8999999864
No 471
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.67 E-value=0.59 Score=50.23 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999865
No 472
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.57 E-value=0.71 Score=46.64 Aligned_cols=35 Identities=31% Similarity=0.467 Sum_probs=31.4
Q ss_pred CcCcEEEECC-CHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+.|+|.|| |..|..++..|+++|++|++++|..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3457999998 9999999999999999999999854
No 473
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.50 E-value=0.58 Score=44.23 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 78 LRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
+.|+|.|| |..|..++..|.++|++|+++.|.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 57999996 99999999999999999999999754
No 474
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=86.31 E-value=0.64 Score=47.70 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=31.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~ 109 (664)
...+|+|+|+|-+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45689999999999999999999999 79999986
No 475
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.26 E-value=0.62 Score=52.68 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999874
No 476
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=86.25 E-value=0.75 Score=46.83 Aligned_cols=33 Identities=15% Similarity=0.288 Sum_probs=29.7
Q ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 77 KLRILVAGG-GIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 77 ~~~v~i~g~-g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
..+|+|||+ |-+|.++|..|+.+|+ +|.++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 458999998 9999999999999995 89999975
No 477
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=86.25 E-value=0.54 Score=46.27 Aligned_cols=34 Identities=12% Similarity=0.197 Sum_probs=31.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999999863
No 478
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=86.20 E-value=0.64 Score=49.41 Aligned_cols=35 Identities=37% Similarity=0.252 Sum_probs=31.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
....|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34689999999999999999999999999999763
No 479
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.12 E-value=0.68 Score=49.61 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+.+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3579999999999999999999999999999864
No 480
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=86.00 E-value=0.49 Score=49.01 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcC-------CeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKG-------FEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g-------~~~~~~~~~~ 110 (664)
.+|.|||+|-.|.++|..|++.| ++|+++++.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 36999999999999999999999 9999999864
No 481
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=85.91 E-value=0.67 Score=45.69 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|+|||+|-+|.++|..|.+.|++|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999999863
No 482
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=85.78 E-value=0.56 Score=46.43 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 79 RILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 79 ~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
+|.|||+|..|...|..|++ |++|+++++.+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999864
No 483
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.72 E-value=0.67 Score=49.71 Aligned_cols=33 Identities=36% Similarity=0.582 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
++|.|||+|..|..+|..|++.|++|+++++.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 484
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.64 E-value=0.81 Score=46.32 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=31.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCCc
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~~ 111 (664)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 4689999999999999999999998 6889998753
No 485
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.53 E-value=0.84 Score=45.59 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=31.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
....|.|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45689999999999999999999999999999864
No 486
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.52 E-value=0.43 Score=50.03 Aligned_cols=30 Identities=33% Similarity=0.543 Sum_probs=28.1
Q ss_pred CcEEEECCCHHHHHHHHHHHH-cCCeEEEEc
Q 006025 78 LRILVAGGGIGGLVFALAAKR-KGFEVLVFE 107 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~-~g~~~~~~~ 107 (664)
++|.|||+|-.|.++|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 379999999999999999998 499999999
No 487
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.52 E-value=0.84 Score=45.42 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=31.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
....|.|||.|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999864
No 488
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=85.46 E-value=0.56 Score=46.84 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=28.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
.+|-+||-|..|...|..|.+.||+|+++|+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4699999999999999999999999999998754
No 489
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=85.40 E-value=1 Score=43.77 Aligned_cols=36 Identities=25% Similarity=0.163 Sum_probs=31.2
Q ss_pred CCcCcEEEECC-C-HHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGG-G-IGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~-g-~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+.|+|.|| | -.|..+|..|+++|++|+++++..
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 44567999999 7 499999999999999999998863
No 490
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.34 E-value=0.74 Score=44.70 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~ 110 (664)
..+|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999998 789999874
No 491
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=85.34 E-value=0.83 Score=46.23 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=30.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC--eEEEEccC
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF--EVLVFEKD 109 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~--~~~~~~~~ 109 (664)
++.+|+|||+|-+|.++|..|+..++ ++.++|..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 44689999999999999999999887 89999975
No 492
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.25 E-value=0.73 Score=45.03 Aligned_cols=33 Identities=33% Similarity=0.431 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCe-EEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFE-VLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~-~~~~~~~~ 110 (664)
++|.|||+|-.|...|..|++.|++ |.++++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89999763
No 493
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=85.23 E-value=0.14 Score=53.86 Aligned_cols=33 Identities=6% Similarity=0.055 Sum_probs=29.2
Q ss_pred CccccccCCCCCccccCCccccccccccccccc
Q 006025 12 LSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYK 44 (664)
Q Consensus 12 ~~~~~~~~~~~~~k~~~~~~~~i~~c~~~~~~~ 44 (664)
....++++|+|++|+++|+.++|++|+.|+++.
T Consensus 345 iGR~~IanPdlv~ki~~G~~~~I~~ci~~~~~~ 377 (419)
T 3l5a_A 345 MSSPFVTEPDFVHKLAEQRPHDINLEFSMADLE 377 (419)
T ss_dssp ESTHHHHCTTHHHHHHTTCGGGCCCCCCGGGTT
T ss_pred HHHHHHHCcHHHHHHHcCCcccceecCCHHHHH
Confidence 445678999999999999999999999999743
No 494
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=85.23 E-value=0.69 Score=46.39 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=31.4
Q ss_pred CcCcEEEECCC-HHHHHHHHHHHHcCCeEEEEccCC
Q 006025 76 KKLRILVAGGG-IGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 76 ~~~~v~i~g~g-~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
...+|+|||+| ++|..+|..|...|..|++++|..
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 45789999999 689999999999999999999863
No 495
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=85.09 E-value=0.66 Score=45.72 Aligned_cols=36 Identities=22% Similarity=0.151 Sum_probs=32.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHHcCC-eEEEEccCCc
Q 006025 76 KKLRILVAGGGIGGLVFALAAKRKGF-EVLVFEKDMS 111 (664)
Q Consensus 76 ~~~~v~i~g~g~~g~~~a~~l~~~g~-~~~~~~~~~~ 111 (664)
....|+|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 34689999999999999999999999 8999998753
No 496
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=85.00 E-value=1.1 Score=47.22 Aligned_cols=36 Identities=31% Similarity=0.468 Sum_probs=32.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 75 NKKLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 75 ~~~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
....+|+|+|+|..|..++..+.+.|++|.++|..+
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 345689999999999999999999999999998653
No 497
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=84.91 E-value=0.87 Score=46.36 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..|.|||.|-.|.++|..|++.|++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999863
No 498
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.75 E-value=0.76 Score=51.93 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHHcCCeEEEEccCC
Q 006025 77 KLRILVAGGGIGGLVFALAAKRKGFEVLVFEKDM 110 (664)
Q Consensus 77 ~~~v~i~g~g~~g~~~a~~l~~~g~~~~~~~~~~ 110 (664)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3479999999999999999999999999999874
No 499
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=84.74 E-value=0.95 Score=43.70 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHcCC----eEEEEccCC
Q 006025 78 LRILVAGGGIGGLVFALAAKRKGF----EVLVFEKDM 110 (664)
Q Consensus 78 ~~v~i~g~g~~g~~~a~~l~~~g~----~~~~~~~~~ 110 (664)
.+|.|||+|-.|...|..|.+.|+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999864
No 500
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=84.74 E-value=0.92 Score=45.31 Aligned_cols=35 Identities=40% Similarity=0.436 Sum_probs=31.9
Q ss_pred cCcEEEECC-CHHHHHHHHHHHHcCCeEEEEccCCc
Q 006025 77 KLRILVAGG-GIGGLVFALAAKRKGFEVLVFEKDMS 111 (664)
Q Consensus 77 ~~~v~i~g~-g~~g~~~a~~l~~~g~~~~~~~~~~~ 111 (664)
...|+|.|| |..|..++..|.++|++|+++.|...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 457999999 99999999999999999999998754
Done!