BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006028
(664 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 764
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/680 (68%), Positives = 536/680 (78%), Gaps = 44/680 (6%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW+ACAGPLV+VP+ ERV+YFPQGH+EQL+ASTNQ + + PLF+LPSKILCRVVH
Sbjct: 86 QLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLFNLPSKILCRVVHTR 145
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
LLAEQETDEVYAQITL PE DQTEP+SPD C E PKQTVHSFCKILTASDTSTHGGFSV
Sbjct: 146 LLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQTVHSFCKILTASDTSTHGGFSV 205
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
LRKHA ECLPPLDM+ ATPTQEL A+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR
Sbjct: 206 LRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 265
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFI 265
LVAGDAFVFLRG+NGELRVGVRRLA QQS MPSSVISSQSMHLGVLATA+HAV T TLF+
Sbjct: 266 LVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVTTQTLFV 325
Query: 266 VYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWP 325
VYYKPRTSQFII LNKYLEAV++ F+VGMRFKMRFEGEDSPERRFTGTIVG+GD S QW
Sbjct: 326 VYYKPRTSQFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPERRFTGTIVGIGDISPQWS 385
Query: 326 GSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPAS--- 382
SKWRSLKIQWDEPAT+QRPERVS W+IEPFVASA LNL QP VK KRPR +D+P +
Sbjct: 386 NSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPPVKIKRPRPLDLPVAENT 445
Query: 383 ----ASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNS------- 431
S FWY GS+ SH++TQ+ G TE QSSESQV P + KEI+ +I+N++
Sbjct: 446 SSSVPSPFWYAGSSPSHELTQLGGVTEVQSSESQVHWPPKPKEINGNVIHNSNCGSSIGR 505
Query: 432 ---------------------TDDHRIVAAQSVLSGYAS--SGRPGNTVIHEEVERGKKS 468
T+D + V+ +S+LSGY + S RP N +I ++VE+GK+
Sbjct: 506 PEGIWSSSPSVNVSLNLFQDLTEDSKTVSTRSILSGYNTSLSSRPNNGLISDQVEKGKRI 565
Query: 469 EASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARA-ASDFDASQNQDL---- 523
EAS+GC LFGIDL +NS A L ++ P+ +S VKG A S+ D QN D+
Sbjct: 566 EASIGCRLFGIDLTNNSKATALL--EMSCPSITSSSVKGPISAVVSEADRIQNLDVSKSS 623
Query: 524 KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKM 583
E K+ + + S+KETQ +Q S+RTRTKVQMQG+AVGRAVDLTAL+GYD+L ELEKM
Sbjct: 624 NEQKQVVPEASQKETQGRQSCTPSSRTRTKVQMQGVAVGRAVDLTALEGYDELISELEKM 683
Query: 584 FEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPI 643
FEI+G+L PR+KW VVFTDDEGDMML GDD W EFCKMV+KIFIYS+EEVK M+ K
Sbjct: 684 FEIKGELCPRNKWEVVFTDDEGDMMLVGDDPWQEFCKMVRKIFIYSSEEVKKMSPRCKLS 743
Query: 644 ASSVEGEGTAISLDSELKSE 663
SS++GEGT ISLDSEL++E
Sbjct: 744 TSSLDGEGTVISLDSELRTE 763
>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
Length = 695
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/696 (65%), Positives = 532/696 (76%), Gaps = 47/696 (6%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA++E + S + G DLY ELWK CAGPLV+VPR GE+VYYFPQGH+EQLE+ST
Sbjct: 1 MAHLECDSSISRAETDLRGD-DLYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESST 59
Query: 61 NQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP 120
NQEL Q PLF+LPSKILC VVHI LLAEQETDEVYAQITLHPE DQ EP SPD C PE
Sbjct: 60 NQELNQQIPLFNLPSKILCSVVHIRLLAEQETDEVYAQITLHPEADQCEPSSPDPCKPEA 119
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
PK TVH FCKILTASDTSTHGGFSVLRKHATECLPPLDM ATPTQEL AKDLHGYEW+F
Sbjct: 120 PKATVHWFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKF 179
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV 240
KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG+NGELR GVRRLA QQS +PSSV
Sbjct: 180 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSV 239
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRF 300
ISSQSMHLGVLATA+HA+ T TLF+VY KPRTSQFIIGL+KYLEA FS+G RF+MRF
Sbjct: 240 ISSQSMHLGVLATASHALMTKTLFVVYSKPRTSQFIIGLSKYLEATKTKFSLGTRFRMRF 299
Query: 301 EGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
EG++SPERRFTGTIV VGD S QW SKWRSLK+QWDE A VQRP+RVSPW+IEPFVASA
Sbjct: 300 EGDESPERRFTGTIVEVGDLSPQWSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASA 359
Query: 361 PLNLAQPAVKSKRPRSIDIPAS-------ASAFWYQGSTQSHDITQVVGATEGQSSESQV 413
P NLAQP VKSKRPR ++I +S AS+FWY S Q+ ++ + G E Q+S SQV
Sbjct: 360 PSNLAQPMVKSKRPRPVEISSSEVTTNSAASSFWYHSSPQTTELNR-GGVPEVQTSGSQV 418
Query: 414 VRPMRQKE----------------------IDSTI-INNNSTDDHRIVAAQSVLSGYASS 450
V P+RQKE +D + + +S + + V A SVLS AS
Sbjct: 419 VWPLRQKESNSSSYSSARVCSEGIWPSSPHVDVPLSLFRDSKESSKNVIAGSVLSSIASP 478
Query: 451 --GRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGT--SGVK 506
+P N +IH++VE+GKKS++S G WLFG +L +N+ T P + ++P T SG K
Sbjct: 479 ILSKPNNVLIHDQVEKGKKSDSS-GFWLFGCNLSNNTKTTCP---QEIEPVFKTMPSGAK 534
Query: 507 GSARAASDFDASQNQDL----KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVG 562
G A + F++ Q D+ KE K+ + + S KETQ KQG STRTRTKVQMQG+AVG
Sbjct: 535 GPIPADA-FESDQGLDVSKLSKEQKQVILEASPKETQGKQGLTLSTRTRTKVQMQGVAVG 593
Query: 563 RAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMV 622
RAVDLTALKGYD L DELEKMFEI+G+LRP++KWAVVFTDDE DMML GDDQWP+FCK+V
Sbjct: 594 RAVDLTALKGYDHLIDELEKMFEIKGELRPKNKWAVVFTDDENDMMLMGDDQWPDFCKLV 653
Query: 623 KKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDS 658
KKIFIYS++EV+ M K +SS++ EGT +S+DS
Sbjct: 654 KKIFIYSSDEVQKM-NRCKLQSSSLDCEGT-VSVDS 687
>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/687 (64%), Positives = 523/687 (76%), Gaps = 57/687 (8%)
Query: 16 GGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
GG G DLY ELWKACAGPLV+VPR GERV+YFPQGH+EQLEASTNQEL+ + PLF+LPS
Sbjct: 6 GGEGD-DLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPS 64
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILCRV+HI+L AEQETDEVYAQITL PE DQ EPRSPD C PEPP+ TVHSFCK+LTAS
Sbjct: 65 KILCRVIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPPRPTVHSFCKVLTAS 124
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLRKHA ECLP LDM ATPTQEL AKDLHGYEWRFKHIFRGQPRRHLLTT
Sbjct: 125 DTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 184
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWSTFVTSKRLVAGD+FVFLRG+NGELRVGVRRLA QQS+MP+SVISSQSMHLGVLATA+
Sbjct: 185 GWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATAS 244
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
HAV T TLFIVYYKPRTSQFIIGLNKYLEAV + F+VGMRFKMRFEGEDSPERRF+GTIV
Sbjct: 245 HAVATQTLFIVYYKPRTSQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIV 304
Query: 316 GVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV-KSKRP 374
G DFS +W S+WRSLK+QWDEPA++ RPE+VSPWEIE +V+S P LA P V K+KRP
Sbjct: 305 GGEDFSPEWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGVLKNKRP 364
Query: 375 RSIDIP------ASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIIN 428
RS + P A+ASA W+ G TQSHD+TQ+ EG+ SE+ V+ +Q +I +IN
Sbjct: 365 RSNESPVPETGSAAASAVWHLGLTQSHDLTQMSSTAEGKRSENHVMWHHKQADIGGPLIN 424
Query: 429 NNS----------------------------TDDHRIVAAQSVLSGYA---SSGRPGNTV 457
+N+ T+D + V+A LSGY+ SS +T+
Sbjct: 425 SNTACVSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYSTLHSSKLTSDTI 484
Query: 458 IHEEVERGKKSEASLG--CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDF 515
I + GKK+ A + C LFG +L N +++ P+G+ + +SG
Sbjct: 485 I-DPNGNGKKAVAEMATSCRLFGFELM-NHSSSPPVGKAHGHSISVSSGT---------- 532
Query: 516 DASQNQDL----KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALK 571
D+ Q DL KE K+G + VS KE Q+KQ ++TR+RTKVQMQGIAVGRAVDLTAL+
Sbjct: 533 DSDQKSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIAVGRAVDLTALE 592
Query: 572 GYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
GYD+L DELE+MFEI+G+LRPR KW +VFTDDEGDMML GDD WPEFC MV++IFI S++
Sbjct: 593 GYDELIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQ 652
Query: 632 EVKNMATSSKPIASSVEGEGTAISLDS 658
+VK M+ SK SS+EGEGT ISLDS
Sbjct: 653 DVKKMSPGSKLPISSMEGEGTTISLDS 679
>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/655 (67%), Positives = 496/655 (75%), Gaps = 70/655 (10%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G S L+ ELW+ACAGPLV+VP+ ERV+YFPQGH+EQL+ASTNQ + + PLF+LPSK
Sbjct: 14 GLESDHLFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLFNLPSK 73
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
ILCRVVH LLAEQETDEVYAQITL PE DQTEP+SPD C E PKQTVHSFCKILTASD
Sbjct: 74 ILCRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQTVHSFCKILTASD 133
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLRKHA ECLPPLDM+ ATPTQEL A+DLHGYEWRFKHIFRGQPRRHLLTTG
Sbjct: 134 TSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTG 193
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WSTFVTSKRLVAGDAFVFLRG+NGELRVGVRRLA QQS MPSSVISSQSMHLGVLATA+H
Sbjct: 194 WSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASH 253
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
AV T TLF+VYYKPRTSQFII LNKYLEAV++ F+VGMRFKMRFEGEDSPERRFTGTIVG
Sbjct: 254 AVTTQTLFVVYYKPRTSQFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPERRFTGTIVG 313
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
+GD S QW SKWRSLKIQWDEPAT+QRPERVS W+IEPFVASA LNL QP VK KRPR
Sbjct: 314 IGDISPQWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPPVKIKRPRP 373
Query: 377 IDIPAS-------ASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
+D+P + S FWY GS+ SH++TQ+ G TE QSSESQV P + KEI+ N
Sbjct: 374 LDLPVAENTSSSVPSPFWYAGSSPSHELTQLGGVTEVQSSESQVHWPPKPKEING---NQ 430
Query: 430 NSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAA 489
NS S+GC LFGIDL +NS A
Sbjct: 431 NS---------------------------------------SIGCRLFGIDLTNNSKATA 451
Query: 490 PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTR 549
L + D S++ + E K+ + + S+KETQ +Q S+R
Sbjct: 452 LL------------------EMIQNLDVSKSSN--EQKQVVPEASQKETQGRQSCTPSSR 491
Query: 550 TRT-KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMM 608
TRT KVQMQG+AVGRAVDLTAL+GYD+L ELEKMFEI+G+L PR+KW VVFTDDEGDMM
Sbjct: 492 TRTKKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGELCPRNKWEVVFTDDEGDMM 551
Query: 609 LAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSE 663
L GDD W EFCKMV+KIFIYS+EEVK M+ K SS++GEGT ISLDSEL++E
Sbjct: 552 LVGDDPWQEFCKMVRKIFIYSSEEVKKMSPRCKLSTSSLDGEGTVISLDSELRTE 606
>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
Length = 693
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/698 (63%), Positives = 523/698 (74%), Gaps = 68/698 (9%)
Query: 16 GGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
GG G DLY ELWKACAGPLV+VPR GERV+YFPQGH+EQLEASTNQEL+ + PLF+LPS
Sbjct: 6 GGEGD-DLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPS 64
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILCRV+HI+L AEQETDEVYAQITL PE DQ EPRSPD C PEPP+ TVHSFCK+LTAS
Sbjct: 65 KILCRVIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPPRPTVHSFCKVLTAS 124
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLRKHA ECLP LDM ATPTQEL AKDLHGYEWRFKHIFRGQPRRHLLTT
Sbjct: 125 DTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 184
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWSTFVTSKRLVAGD+FVFLRG+NGELRVGVRRLA QQS+MP+SVISSQSMHLGVLATA+
Sbjct: 185 GWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATAS 244
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
HAV T TLFIVYYKPRTSQFIIGLNKYLEAV + F+VGMRFKMRFEGEDSPERRF+GTIV
Sbjct: 245 HAVATQTLFIVYYKPRTSQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIV 304
Query: 316 GVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV-KSKRP 374
G DFS +W S+WRSLK+QWDEPA++ RPE+VSPWEIE +V+S P LA P V K+KRP
Sbjct: 305 GGEDFSPEWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGVLKNKRP 364
Query: 375 RSIDIP-----------------ASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPM 417
RS + P A+ASA W+ G TQSHD+TQ+ EG+ SE+ V+
Sbjct: 365 RSNESPVPGQGKFLHRFCFETGSAAASAVWHLGLTQSHDLTQMSSTAEGKRSENHVMWHH 424
Query: 418 RQKEIDSTIINNNS----------------------------TDDHRIVAAQSVLSGYA- 448
+Q +I +IN+N+ T+D + V+A LSGY+
Sbjct: 425 KQADIGGPLINSNTACVSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYST 484
Query: 449 --SSGRPGNTVIHEEVERGKKSEASLG--CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG 504
SS +T+I + GKK+ A + C LFG +L N +++ P+G+ + +SG
Sbjct: 485 LHSSKLTSDTII-DPNGNGKKAVAEMATSCRLFGFELM-NHSSSPPVGKAHGHSISVSSG 542
Query: 505 VKGSARAASDFDASQNQDL----KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIA 560
D+ Q DL KE K+G + VS KE Q+KQ ++TR+RTKVQMQGIA
Sbjct: 543 T----------DSDQKSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIA 592
Query: 561 VGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCK 620
VGRAVDLTAL+GYD+L DELE+MFEI+G+LRPR KW +VFTDDEGDMML GDD WPEFC
Sbjct: 593 VGRAVDLTALEGYDELIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCN 652
Query: 621 MVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDS 658
MV++IFI S+++VK M+ SK SS+EGEGT ISLDS
Sbjct: 653 MVRRIFICSSQDVKKMSPGSKLPISSMEGEGTTISLDS 690
>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
Length = 667
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/616 (69%), Positives = 487/616 (79%), Gaps = 20/616 (3%)
Query: 55 QLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPD 114
QLEASTNQELT Q P F+LPSKILCRVVHI LLAEQETDEVYAQITLHPE DQTEP SPD
Sbjct: 66 QLEASTNQELTQQIPKFNLPSKILCRVVHIHLLAEQETDEVYAQITLHPEVDQTEPTSPD 125
Query: 115 QCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLH 174
QC PEP K+ VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDM + PTQEL AKDLH
Sbjct: 126 QCTPEPQKRPVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAKDLH 185
Query: 175 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS 234
GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR +NGELRVGVRRLA QQS
Sbjct: 186 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGELRVGVRRLARQQS 245
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGM 294
MPSSVISSQSMHLGVLATA+HAV T TLF+VYYKPRTSQFIIGLNKYLEAV+H FS+GM
Sbjct: 246 PMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRTSQFIIGLNKYLEAVNHGFSLGM 305
Query: 295 RFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
RFKMRFEGEDSPERRF GTIVGVGDFS +W GSKWRSLKIQWDEPATVQRP+RVSPWEIE
Sbjct: 306 RFKMRFEGEDSPERRFMGTIVGVGDFSPEWSGSKWRSLKIQWDEPATVQRPDRVSPWEIE 365
Query: 355 PFVASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
PF ASA +NL Q KSKRPR +D AS + GS+ S + S+ +
Sbjct: 366 PFAASASVNLPQTVGKSKRPRPVDTTASDNCL-LNGSSCSSRV------------RSEGI 412
Query: 415 RPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASS--GRPGNTVIHEEVERGKKSEASL 472
P S + ++S DD+R + QSV+SGYA + R N+++HE+VE+GKK E S+
Sbjct: 413 WPHSPHMDVSLSLFSDSADDNRTITTQSVISGYAPAFPSRQSNSLVHEQVEKGKKYENSV 472
Query: 473 GCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDL----KEVKR 528
GC LFGIDL NS+TAAP ++ + ++G +GSA A D +QN D+ KE K
Sbjct: 473 GCRLFGIDLISNSSTAAPPEKESLGLKMDSNGPRGSAPAVDGTDEAQNVDVSKASKEQKE 532
Query: 529 GMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG 588
++V KET +K G+ STRTRTKVQMQG+AVGRAVDLTALKGY DL ELE++FEI+G
Sbjct: 533 AASEVMPKETHSKPGT-TSTRTRTKVQMQGVAVGRAVDLTALKGYGDLIKELEELFEIKG 591
Query: 589 QLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVE 648
+L R+KWAVVFTDDEGDMML GDD W EFCKMV+KI IYS+EE K + T K +ASS+E
Sbjct: 592 ELSTREKWAVVFTDDEGDMMLVGDDPWREFCKMVRKILIYSSEEAKKLKTRCKLLASSLE 651
Query: 649 GEGTAISLDSELKSET 664
GEG SLDSE +S+T
Sbjct: 652 GEGAIASLDSEHRSDT 667
>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 693
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/678 (63%), Positives = 499/678 (73%), Gaps = 40/678 (5%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
M E N G S+ G DLY ELWKACAGPLVEVP +GERV+YFPQGH+EQLE ST
Sbjct: 1 MTLYEENPG---ESRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEEST 57
Query: 61 NQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP 120
NQEL HQ P FDLP KILCRVV+I LLAE+ETDEVYAQITL+PE DQ+EP+S D PE
Sbjct: 58 NQELNHQIPHFDLPPKILCRVVNIRLLAEKETDEVYAQITLYPEADQSEPQSADPEPPER 117
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
+QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDM+ +TPTQELAAKDLHGYEW+F
Sbjct: 118 TRQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKF 177
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV 240
KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG+NGELRVGVRR A QQS MPSSV
Sbjct: 178 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSV 237
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRF 300
ISS SMHLGVLATA+HAV+T T F+VYYKPRTSQFII LNKYLE V + + VGMRFKMRF
Sbjct: 238 ISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQFIISLNKYLETVKNGYEVGMRFKMRF 297
Query: 301 EGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
EGE+SPERRFTGTIVGVGD S QW SKWRSLKIQWDEPAT+QRPERVSPWEIEPFV SA
Sbjct: 298 EGEESPERRFTGTIVGVGDMSPQWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPFVPSA 357
Query: 361 PLNLAQPAVKSKRPRSIDIP-------ASASAFWYQGSTQSHDITQVVGATEGQSSESQV 413
LN PA+KSKR R ++IP ++ S FW QGST SH+I+Q+ G E QSS ++V
Sbjct: 358 SLNFTHPAIKSKRARPVEIPPPEVTSGSAPSGFWLQGSTISHEISQLSGTNEVQSSNNRV 417
Query: 414 VRPMRQKEIDSTIINNN-----------------------STDDHRIVAAQSVL----SG 446
V + Q+++DS + N ST + +V + L S
Sbjct: 418 VWALGQRKLDSNSSHCNPVANVEGIWPSPPLNISLNLYPDSTFERELVQQKHPLSSPYSS 477
Query: 447 YASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVK 506
+S + + +++E+G K + SLGC +FGIDLK+N + L R+ T G K
Sbjct: 478 SVTSKPSSDLIQPDQLEKGSKPDISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAK 537
Query: 507 G---SARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGR 563
+A DA + ++ ++ K TQ K S S+RTRTKVQMQG+AVGR
Sbjct: 538 EPVVTAVVTPQVDAGNLSQPSKEQQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGR 597
Query: 564 AVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
AVDLT L+GY+DL DELE +FEI+G+LR +KW++VFTDDE DMML GDD WPEFCKMVK
Sbjct: 598 AVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTDDENDMMLVGDDPWPEFCKMVK 657
Query: 624 KIFIYSTEEVKNMATSSK 641
+IFI S+EEVK M+ SK
Sbjct: 658 RIFICSSEEVKKMSRESK 675
>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 722
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/719 (61%), Positives = 526/719 (73%), Gaps = 58/719 (8%)
Query: 1 MAYVEPNFGCSLSS-----QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQ 55
MA++E N G SS + G DLYRELWK CAGPLV+VPRNG+RV+YFPQGH+EQ
Sbjct: 1 MAHLECNLGGPGSSGTSQPEKGLKDDDLYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQ 60
Query: 56 LEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQ 115
L+AST+QEL + P F+LP+KI CRVV+I+LLAEQ+TDEVYA I L PE+DQTEP +PD
Sbjct: 61 LQASTDQELNQEIPHFNLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDP 120
Query: 116 CLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHG 175
+ E PKQ HSFCKILTASDTSTHGGFSVLRKHATECLP LDMT +TPTQELAAKDLHG
Sbjct: 121 NVSEAPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHG 180
Query: 176 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSS 235
+EW+FKHI+RGQPRRHLLTTGWSTFV SKRLVAGDAFVFLRGE+G+LRVGVRRLA QQS
Sbjct: 181 FEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSP 240
Query: 236 MPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMR 295
MPSSVISSQSMHLGVLATA+HAV T T+F+VYYKPRTSQFI+GLNKYLEAV++ FS+ MR
Sbjct: 241 MPSSVISSQSMHLGVLATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSLSMR 300
Query: 296 FKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
FKMRFEG+DSPERRF+GTIVGVGD S W S+WRSLK+QWDEPAT+ RP+RVS WEIEP
Sbjct: 301 FKMRFEGDDSPERRFSGTIVGVGDVSAGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEP 360
Query: 356 FVASAPLNLAQPAVKSKRPRSIDIPAS-------ASAFWYQGSTQSHDITQVVGATEGQS 408
FVAS LN+ QPAVK KR R D+ +S AS FWY GS S++++Q+ A E QS
Sbjct: 361 FVASTALNVTQPAVKGKRSRPADVLSSGSIFNSAASGFWYHGS--SNELSQLGAAAEVQS 418
Query: 409 SESQVVR-PMRQKE-IDSTIIN-NNSTDDHRI---------------------------- 437
E+QVV +RQK+ I+S IN NNS+ R+
Sbjct: 419 KENQVVPCSLRQKDIINSNPINANNSSISTRVRMEGVWPSSPHLNATPNLFSDPNNNNSN 478
Query: 438 --VAAQSVLSGYAS-SGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTA--APLG 492
V+A+S++SGY + R + + VE GKK+E SL CWLFG++L +N + P
Sbjct: 479 NGVSARSLISGYPNVPSRSSDGPTCDGVEDGKKTENSLDCWLFGVNLTNNCSNVITTPSE 538
Query: 493 RKVVDPTTGT--SGVKGSARAA---SDFDASQNQDL--KEVKRGMADVSRKETQNKQGSA 545
R+ P++ SG K S AA ++ + N L K K+ +++ S + QNKQ +
Sbjct: 539 REQRGPSSSVVLSGPKESIPAAACETERVQTPNYSLSNKGQKQIISEASPNQWQNKQATV 598
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEG 605
S RTRTKVQMQG+AVGRA DLT L GYDDL DELEK+FEI+G+LR +DKWAV FTDDE
Sbjct: 599 LSMRTRTKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRSQDKWAVTFTDDEN 658
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSET 664
DMMLAGDD WPEFC MVK+IFI S E++K M P ASS E E +S DS+ + ET
Sbjct: 659 DMMLAGDDPWPEFCNMVKRIFICSREDLKKMKCCKLP-ASSSEVEEILLSPDSQNRDET 716
>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 799
Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/686 (62%), Positives = 512/686 (74%), Gaps = 46/686 (6%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
DLYRELWK CAGPLV+VPR G+RV+YFPQGH+EQL+AST+QEL + P F+LP+KI CRV
Sbjct: 111 DLYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRV 170
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
V+I+LLAEQ+TDEVYA I L PE+DQTEP +PD + EPPKQ HSFCKILTASDTSTHG
Sbjct: 171 VNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNISEPPKQKFHSFCKILTASDTSTHG 230
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLRKHATECLP LDMT ATPTQELAAKDLHG+EW+FKHI+RGQPRRHLLTTGWSTFV
Sbjct: 231 GFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFV 290
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
SKRLVAGDAFVFLRGE+G+LRVGVRRLA QQS MPSSVISSQSMHLGVLATA+HAV T
Sbjct: 291 ASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTR 350
Query: 262 TLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
T+F+VYYKPRTSQFI+GLNKYLEAV++ FS+GMRFKMRFEG+DSPERRF+GTIVGVGD S
Sbjct: 351 TMFLVYYKPRTSQFIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERRFSGTIVGVGDVS 410
Query: 322 EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPA 381
W S+WRSLK+QWDEPAT+ RP+RVS WEIEPFVAS LN+ QPAVK KR R D+ +
Sbjct: 411 AGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAVKGKRSRPADVSS 470
Query: 382 S-ASAFWYQGSTQSHDITQVVGAT-EGQSSESQVVR-PMRQKEIDST--IINNNSTDDHR 436
S AS FWY GS S++++Q+ AT E QS E+QVV +RQK+I ++ I NNS+ R
Sbjct: 471 SAASGFWYHGS--SNELSQLGAATAEVQSKENQVVPCSLRQKDIINSNPIDANNSSISSR 528
Query: 437 I--------------------------VAAQSVLSGYAS-SGRPGNTVIHEEVERGKKSE 469
+ V A+S +SGY + R + E VE GKK E
Sbjct: 529 VRMEGVWPSSPHLNVTPNLFSDPNNNSVLARSPISGYLNVPSRSSDGPTCEHVEDGKKIE 588
Query: 470 ASLGCWLFGIDLKHNSNTA---APLGRKVVDPTTGT---SGVKGSARAA---SDFDASQN 520
SL CWLFG++L +N + P R++ P + + SG K S AA ++ + N
Sbjct: 589 NSLDCWLFGVNLTNNCSNVIITTPSERELRGPISSSVAPSGPKESIPAAACETERVQTPN 648
Query: 521 QDL--KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFD 578
L K K+ +++ S E QNKQ + S RTRTKVQMQG+AVGRA DLT L GYDDL +
Sbjct: 649 YSLSNKGQKQIISEASPNEWQNKQATVPSMRTRTKVQMQGVAVGRAFDLTTLSGYDDLIE 708
Query: 579 ELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
ELEK+FEI+G+L +DKWAV FTDDE DMML GDD WPEFC MVK+IFI S E++K M
Sbjct: 709 ELEKLFEIRGELHSQDKWAVTFTDDENDMMLVGDDPWPEFCNMVKRIFICSREDLKKMKC 768
Query: 639 SSKPIASSVEGEGTAISLDSELKSET 664
P ASS E E +S DS+ + ET
Sbjct: 769 CKLP-ASSSEVEEVLLSPDSQNRDET 793
>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
Length = 694
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/681 (62%), Positives = 518/681 (76%), Gaps = 37/681 (5%)
Query: 13 SSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
+S+G G DLY ELWKACAGPLV+VP++GERV+YFPQGH+EQLEASTNQEL + PLF+
Sbjct: 13 NSEGSCGD-DLYTELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTNQELNQRVPLFN 71
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKI 131
LPSKILCRV++I LLAEQ+TDEVYAQITL PE+DQTEP SPD EP ++ VHSFCK+
Sbjct: 72 LPSKILCRVINIHLLAEQDTDEVYAQITLLPESDQTEPTSPDPSPAEPSRRPAVHSFCKV 131
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSVLRKHATECLP LDMT TPTQEL AKDLHGYEWRFKHIFRGQPRRH
Sbjct: 132 LTASDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRH 191
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWSTFVTSKRLVAGD+FVFLRGENGELRVGVRRLA QQSSMPSSVISSQSMHLGVL
Sbjct: 192 LLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSQSMHLGVL 251
Query: 252 ATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
ATA+HAV T TLF+VYYKPRTSQFII LNKYLEA+++ FSVGMRFKMRFEGEDSPERRF+
Sbjct: 252 ATASHAVATQTLFVVYYKPRTSQFIISLNKYLEAINNKFSVGMRFKMRFEGEDSPERRFS 311
Query: 312 GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VK 370
GTIVGV DFS W SKWR LK+QWDEPA++ RP++VSPWEIEPF ASAP N++QP +K
Sbjct: 312 GTIVGVEDFSPHWLDSKWRQLKVQWDEPASIPRPDKVSPWEIEPFSASAPSNISQPVPLK 371
Query: 371 SKRPR------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEID- 423
+KRPR ++D+ ++AS W TQSHD+TQ+ EG+ +E+ ++ +Q +I+
Sbjct: 372 NKRPRPPIEVPTLDLSSTASPLWNSRLTQSHDLTQLSVTAEGKRNENHIMWHHKQNDINS 431
Query: 424 ----------------STIIN------NNSTDDHRIVAAQSVLSGYAS-SGRPGNTVIHE 460
S ++N T+D + V+ V+SGY++ N I +
Sbjct: 432 HSNSISRTQTEGGWLSSPLVNVSQHLFQEVTEDSKSVSNWPVVSGYSTPQSSKLNDSILD 491
Query: 461 EVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGS--ARAASDFDAS 518
VE+G+KS+ + LFGI+L ++S ++ P + P + +SG + S D+
Sbjct: 492 PVEKGRKSDVATSYRLFGIELINHSASSLPTEKAPAQPLSVSSGTTEAHVVSTLSAADSD 551
Query: 519 QNQDL-KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLF 577
Q D+ KE K VS K+ Q++Q S+ASTR+RTKVQMQG+AVGRA+DLT +KGY+ L
Sbjct: 552 QKSDISKERKPEQLHVSPKDAQSRQ-SSASTRSRTKVQMQGVAVGRAIDLTMIKGYNQLL 610
Query: 578 DELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
DELE+MF+I+GQL PRDKW +V+TDDEGDMML GDD WPEFC MV++IFI S+++VK M
Sbjct: 611 DELEEMFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMM 670
Query: 638 TSSKPIASSVEGEGTAISLDS 658
SK S EGEGT IS DS
Sbjct: 671 PGSKLPMFSTEGEGTVISSDS 691
>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 662
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/653 (61%), Positives = 475/653 (72%), Gaps = 49/653 (7%)
Query: 16 GGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
G G GDLY +LWK CAGPLV+VPR GERV+YFPQGH+EQL+ASTNQ L + P F+LP
Sbjct: 2 AGVGDGDLYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHFNLPP 61
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILCRVVHI+LLAEQETDEVYA+ITL PE++Q EP SPD PE KQ H+F KILTAS
Sbjct: 62 KILCRVVHIQLLAEQETDEVYARITLLPESNQEEPTSPDPSPPETQKQVFHTFSKILTAS 121
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLR+HATECLP LDMT TP+QEL A+DLHG+EW+FKHIFRGQPRRHLLTT
Sbjct: 122 DTSTHGGFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQPRRHLLTT 181
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWSTFVTSK+LVAGDAFVFLRGENGELRVGVRR+A QQS MPSSVISSQSMHLGVLATA+
Sbjct: 182 GWSTFVTSKKLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHLGVLATAS 241
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
HA TST+F+VYYKPRTSQFIIG+NKYLEA ++ FSVGMRFKMRFE EDSPERRF+GTIV
Sbjct: 242 HAFLTSTMFVVYYKPRTSQFIIGVNKYLEAENNKFSVGMRFKMRFEVEDSPERRFSGTIV 301
Query: 316 GVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
GVGD S W S+WRSLK+QWDEPA + RPERVS WEIEPF AS LN+ Q VKSKR R
Sbjct: 302 GVGDVSPGWWNSQWRSLKVQWDEPAIIPRPERVSSWEIEPFAASTALNVTQQLVKSKRSR 361
Query: 376 S------IDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
+ I + A AFWY+G D T + +TE QS+E+ VV RQKEI+ +N+
Sbjct: 362 TEVSSSEIAPNSPALAFWYRG---PQDPTALGSSTEVQSNENPVVWSTRQKEINGNPMNS 418
Query: 430 NST---------------------DDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKK- 467
+S + + V AQS + S RP + + H+ +E K+
Sbjct: 419 SSKVRVEGMRPSSPHSKPNLFMDPKNCKAVPAQSTV-----SSRPKDDLAHDPMECAKRS 473
Query: 468 SEASLGCWLFGIDLKHN--SNTAAPLGRKVVDPTTGTSGVKGSAR-AASDFDASQNQDL- 523
S+ + CW+FG++L +N N P ++ P SG K S AA + +A QN
Sbjct: 474 SQNPMNCWIFGVNLTNNITKNVTLPDKEQLGCPAIIPSGPKDSIPVAACETEAGQNPYYS 533
Query: 524 ---KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
KE K+ ++D S +Q TRTRTKVQMQGIAVGRAVDLT LK YDDL DEL
Sbjct: 534 LSNKEHKQNISDGSPSASQRH------TRTRTKVQMQGIAVGRAVDLTVLKDYDDLIDEL 587
Query: 581 EKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
EKMF+I+G+L+ + KWA+ FTDD DMML GDD WPEFC +VK+IFI S E+V
Sbjct: 588 EKMFDIKGELQMQTKWAITFTDDGNDMMLVGDDPWPEFCTVVKRIFICSREDV 640
>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/634 (61%), Positives = 456/634 (71%), Gaps = 79/634 (12%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G G DLY ELWKACAGPLV+VP+ GERV+YFPQGH+EQLEASTNQEL + PLF+LPSK
Sbjct: 11 GCGEDDLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSK 70
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
ILCRV++ +LLAEQETDEVYAQITL PE+DQ E SPD C EPP+ TVHSFCK+LTASD
Sbjct: 71 ILCRVINTQLLAEQETDEVYAQITLLPESDQIETTSPDPCPSEPPRPTVHSFCKVLTASD 130
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLRKHA+ECLPPLDM PTQEL AKDLHGYEWRFKHIFRGQPRRHLLTTG
Sbjct: 131 TSTHGGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 190
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WSTFVTSKRLVAGD+FVFLRGENGELRVGVRR+A QQSSMPSSVISSQSMHLGVLATA+H
Sbjct: 191 WSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVLATASH 250
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
A+ T TLF+VYYKPRTSQFII LNKYLEAV++ F+VGMRFKMRFEGEDSPERRF+GTIVG
Sbjct: 251 AISTLTLFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRFKMRFEGEDSPERRFSGTIVG 310
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPR 375
V DFS W SKWRSLK+QWDEPA++ RP+RVSPWEIEP VAS P NL+QP K+KRPR
Sbjct: 311 VEDFSPHWNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCVASVPANLSQPVQPKNKRPR 370
Query: 376 -SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDD 434
I+IPA A +D
Sbjct: 371 PPIEIPAFA------------------------------------------------MED 382
Query: 435 HRIVAAQSVLSGYAS--SGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNS-NTAAPL 491
+ V+ V GY++ S + N I + +G+K E LFG DL + S ++++P+
Sbjct: 383 SKSVSPWPVFVGYSTPLSSKSKNDPIPDPSNKGRKYEVPTSYRLFGFDLVNQSTSSSSPI 442
Query: 492 GRKVVDPTT----GTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAAS 547
+ P + T G +A A D D Q + S+ S
Sbjct: 443 EKVSAQPISVSRGATDGRVLAALPAVDSD----------------------QKHEQSSTS 480
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
TR+RTKVQ+QGIAVGRAVDLT +KGY L DELE++F+I+GQL PRDKW +V+TDDEGDM
Sbjct: 481 TRSRTKVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDM 540
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
ML GDD WPEFC MV++IFI S+++VK M+ SK
Sbjct: 541 MLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGSK 574
>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 692
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/686 (59%), Positives = 481/686 (70%), Gaps = 53/686 (7%)
Query: 16 GGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
G G +LY + WKACAGPLV+VPR G+RV+YFPQGH+EQLEASTNQEL + PL LP+
Sbjct: 14 GESGEDELYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPT 73
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILCRVV++ LLAEQETDEVYAQITL PE+ Q EP + D C EPP+ VHSF K+LTAS
Sbjct: 74 KILCRVVNVHLLAEQETDEVYAQITLVPESSQDEPTNADPCTAEPPRAPVHSFSKVLTAS 133
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLRKHATECLP LDM+ TPTQEL AKDLHGYEWRFKHIFRGQPRRHLLTT
Sbjct: 134 DTSTHGGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 193
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWSTFVTSKRLVAGD FVFLRG+NGELRVGVRRLA Q SSMPSSVISSQSMHLGVLATA+
Sbjct: 194 GWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATAS 253
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE--RRFTGT 313
HAV T TLF+VYYKPRTSQFIIG+NKYLEA+ FSVGMRFKMRFEG+DS E +RF+GT
Sbjct: 254 HAVATQTLFVVYYKPRTSQFIIGVNKYLEAMDKKFSVGMRFKMRFEGDDSAETDKRFSGT 313
Query: 314 IVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSK 372
IVGV D S W SKWRSLK+QWDEPA V RP+RVSPWEIEPFVASA QP VK+K
Sbjct: 314 IVGVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTK 373
Query: 373 RPR------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDS-- 424
RPR +D + AS FW G Q+ D+ Q E + +++ Q +++S
Sbjct: 374 RPRPPSETPDVDTTSVASVFWDAGLQQA-DMAQKNVLAESKWNDNTGTWHHMQTDMNSKS 432
Query: 425 ----TIINNNS--------------------TDDHRIVAAQSVLSGYASSGRPGNTVIHE 460
T++ N + TDD +IV+A V ++S + N + +
Sbjct: 433 NSGNTMLRNQTEGSWLSSPHSSCPSHLFQDVTDDSKIVSAWPVSKPHSS--KLNNDHVLD 490
Query: 461 EVERGKKSEASLGCWLFGIDL---KHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDA 517
+V++ K E + LFGIDL NS + + V+ T+ +G S DA
Sbjct: 491 QVDKESKVETATSYRLFGIDLIDPSRNSPSVEKASAQAVNVPKVTT--EGCTSTLSRTDA 548
Query: 518 SQNQDLK-----EVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKG 572
D+ E K+ VS K+TQ+KQ R+RTKVQMQG+AVGRAVDLT L G
Sbjct: 549 GHKSDVSMASSMERKQEQLQVSPKDTQSKQ----ICRSRTKVQMQGVAVGRAVDLTMLDG 604
Query: 573 YDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEE 632
Y L +ELE MF I+GQL+ R+KW +VFTDDEGDMML GDD WPEFC MV++IFI S+++
Sbjct: 605 YGQLINELEDMFNIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQD 664
Query: 633 VKNMATSSKPIASSVEGEGTAISLDS 658
VK M+ SK SSVE +GT IS D+
Sbjct: 665 VKKMSCGSKLPISSVE-DGTVISSDT 689
>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 691
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/694 (58%), Positives = 488/694 (70%), Gaps = 62/694 (8%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
++ G G ++Y LWK CAGPLV+VPR G+RV+YFPQGH+EQLEASTNQEL + PL
Sbjct: 10 VAGSGYSGEDEMYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLL 69
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
LP+KILCRVV++ LLAEQETDEVYAQITL PE++Q EP +PD C EPP+ VHSF K+
Sbjct: 70 KLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQDEPMNPDPCTAEPPRAPVHSFSKV 129
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSVLRKHA ECLP LDM+ TPTQEL AKDLHGYEWRFKHIFRGQPRRH
Sbjct: 130 LTASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRH 189
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWSTFVTSKRLVAGD FVFLRG+NGELRVGVRRLA Q SSMPSSVISSQSMHLGVL
Sbjct: 190 LLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVL 249
Query: 252 ATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE--RR 309
ATA+HAV T TLF+VYYKPRTSQFII +NKYLEA++ FSVGMR KMRFEG+DS E +R
Sbjct: 250 ATASHAVATQTLFVVYYKPRTSQFIISVNKYLEAMNR-FSVGMRLKMRFEGDDSAETDKR 308
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA- 368
F+GTIVGV D S W SKWRSLK+QWDEPA V RP+RVSPWEIEPFVASA QP
Sbjct: 309 FSGTIVGVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTM 368
Query: 369 VKSKRPR------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
VK+KRPR +D ++AS FW G Q+ D+ Q E + ++S Q ++
Sbjct: 369 VKTKRPRPPSETPDVDTTSAASVFWDAGLQQA-DMAQKNVLAESKRNDSTGTWHHMQTDM 427
Query: 423 DS------TIINN--------------------NSTDDHRIVAAQSVLSGYASSGRPGNT 456
+S ++ N ++TDD + V+A V ++S R N
Sbjct: 428 NSKSNSGNAMLRNQTEGSWLSSPHSSCPSHLFQDATDDSKSVSAWPVSKPHSS--RLNND 485
Query: 457 VIHEEVERGKKSEASLGCWLFGIDL-KHNSNTAAPLGRKVVDPTTGTSG------VKGSA 509
+ ++V++ K E + LFGIDL H+ N+ + V+ + +G +G
Sbjct: 486 HVLDQVDKESKVETATSYRLFGIDLIDHSRNSPS------VEKASAQAGNAPKVTTEGCT 539
Query: 510 RAASDFDASQNQDL-----KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRA 564
+ DA D+ KE K+ VS KETQ+KQ R+RTKVQMQG+AVGRA
Sbjct: 540 STLTRTDAGHLSDVPMASSKERKQEQQQVSPKETQSKQ----ICRSRTKVQMQGVAVGRA 595
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKK 624
VDLT L GYD L +ELE+MF+I+GQL+ R+KW +VFTDDEGDMML GDD WPEFC MV++
Sbjct: 596 VDLTMLDGYDQLINELEEMFDIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRR 655
Query: 625 IFIYSTEEVKNMATSSKPIASSVEGEGTAISLDS 658
IFI S+++VK M+ SK SSVE +GT IS D+
Sbjct: 656 IFICSSQDVKKMSCGSKLPISSVE-DGTVISSDT 688
>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 688
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/672 (58%), Positives = 468/672 (69%), Gaps = 43/672 (6%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G G DLY ELW+ACAGPLV++PR ERV+YFPQ +ASTN EL + PLF+L SK
Sbjct: 21 GCGRDDLYMELWRACAGPLVDIPRVDERVFYFPQ------QASTNLELNKRIPLFNLDSK 74
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
ILCRV+HIE LA+ E+DEVYAQITL PE++Q EP+S D C PEPP+ VHSFCK+LTASD
Sbjct: 75 ILCRVIHIEPLADHESDEVYAQITLMPESNQNEPKSMDPCPPEPPRPVVHSFCKVLTASD 134
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLRKHATECLPPLDMTLATPTQ+L AKDLHGYEWRFKHIFRGQPRRHLLTTG
Sbjct: 135 TSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTG 194
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WSTFVTSKRL AGD+FVFLRG+NGELRVGVRR A QQSSMP SVISSQSMHLGVLATA+H
Sbjct: 195 WSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASH 254
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
AV T T F+VYYKPRT QFII LNKYLEAV++ FSVGMRF M FEGEDSPERRF+GTI+G
Sbjct: 255 AVTTQTRFVVYYKPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIG 314
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
D S WP S WRSL++QWDE ++ RP+RVSPW+IEP +SA L+QP K+KRPR
Sbjct: 315 AVDISPHWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPISKNKRPRQ 374
Query: 377 IDIPASASA------FWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI--DSTIIN 428
PA A W G QSHD Q A EG+ E+ R+ + +S+ ++
Sbjct: 375 -PTPAHDGADLTKPTHWDSGLAQSHDGKQCSNAAEGRKGENNESCHHRETDTISNSSCVS 433
Query: 429 NNSTD--------------------DHRIVAAQ--SVLSGYASSG--RPGNTVIHEEVER 464
TD D + V + + L G +S + + I + +E
Sbjct: 434 RTQTDTWLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTSHLVKLSDDQILDPIES 493
Query: 465 GKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLK 524
GKK E C LFGIDL H + A ++ T G + A S N ++
Sbjct: 494 GKKGETVASCRLFGIDLNHLAAEKASSQPSSG--SSDTDGRISTLSVAQSDPKSDNLEVS 551
Query: 525 -EVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKM 583
E K ++ S KE Q Q S+A+TR+RTKV M G+AVGRAVDLT L+GYD L DELEKM
Sbjct: 552 IERKSELSQASLKEIQCNQSSSANTRSRTKVLMHGMAVGRAVDLTILEGYDQLIDELEKM 611
Query: 584 FEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPI 643
F+++GQL RDKW +V+TDDEGDMML GDD W EF MV++IFI S E+VKNM++ SK +
Sbjct: 612 FDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGSKQL 671
Query: 644 ASSVEGEGTAIS 655
+S+E EG ++
Sbjct: 672 -TSIEVEGDVVT 682
>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/646 (58%), Positives = 441/646 (68%), Gaps = 82/646 (12%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPSKILCRV 81
LY ELWK CAGPLVEVPR ERV+YFPQGH+EQL ASTNQ + +E P+FDLP KILCRV
Sbjct: 22 LYTELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVFDLPPKILCRV 81
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ I L AE ETDEVYAQITL PE DQ+EP S D L EP KQ HSF KILTASDTSTHG
Sbjct: 82 LGITLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPTKQMFHSFVKILTASDTSTHG 141
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLRKHATECLP LDMT ATPTQEL +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV
Sbjct: 142 GFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFV 201
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAFVFLRGENG+LRVGVRRLA QS+MP+SVISSQSMHLGVLATA+HAV+T+
Sbjct: 202 SSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTT 261
Query: 262 TLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER-----------RF 310
T+F+V+YKPR SQFI+G+NKY+EA+ H FS+G RF+MRFEGE+SPER RF
Sbjct: 262 TIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETWSVFRF 321
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPA 368
TGTIVG GD S QWP SKWRSL++QWDEP TVQRP++VSPWEIEPF+A++P++ QP
Sbjct: 322 TGTIVGTGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQ 381
Query: 369 VKSKRPR----SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDS 424
+K KR R S+ PA S F Y P Q I++
Sbjct: 382 LKCKRSRPTEPSVITPAPPS-FLYS-------------------------LPQSQDSINA 415
Query: 425 TIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHN 484
++ R S G N E + LFG DL N
Sbjct: 416 SLKLFQDPSLER-----------NSGGYSSNNSFKPETPPPPPRPTNCSYRLFGFDLTSN 464
Query: 485 SNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGS 544
P ++ +D G+A+ + + N+Q
Sbjct: 465 PPAPLPQDKQPMD-------TCGAAKCQEPITPT-------------------SMNEQKK 498
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDE 604
++R+RTKVQMQGIAVGRAVDLT LK YD+L +ELE+MFEIQGQLRPRDKW VVFTDDE
Sbjct: 499 QQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIEELEEMFEIQGQLRPRDKWIVVFTDDE 558
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
GDMMLAGDD W EFCKM KKIFIYS++EVK MAT K I+SS+E E
Sbjct: 559 GDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMATKLK-ISSSLENE 603
>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/677 (58%), Positives = 480/677 (70%), Gaps = 46/677 (6%)
Query: 11 SLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP 69
SL+ G G D LY +LWKACAGP VEVPR G+RV+YFPQGH+EQLE STNQEL + P
Sbjct: 2 SLNCGGCGGEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIP 61
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFC 129
LF L SKILCRVV++ LLAEQETDEVYAQITL PE++QTEP SPD C E P+ VHSFC
Sbjct: 62 LFKLSSKILCRVVNVHLLAEQETDEVYAQITLVPESNQTEPTSPDPCPAELPRPRVHSFC 121
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K+LTASDTSTHGGFSVLRKHATECLP LDM+ +TPTQEL AKDL G+EWRFKHIFRGQPR
Sbjct: 122 KVLTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQPR 181
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWSTFVTSKRLVAGD FVFLRG NGELRVGVRR+A QSSMPSSVISSQSMHLG
Sbjct: 182 RHLLTTGWSTFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVISSQSMHLG 241
Query: 250 VLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-- 307
VLATA+HAV T TLF+VYYKPRTSQFI+ +NKYLEA++ +VGMRFKMRFEG++SPE
Sbjct: 242 VLATASHAVATQTLFVVYYKPRTSQFIVSVNKYLEAINQKCNVGMRFKMRFEGDESPEND 301
Query: 308 RRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
+RF+GTI+GV D S W S WRSLK+QWDEPA+ RP+RVS WEIE +A P +QP
Sbjct: 302 KRFSGTILGVEDISPHWVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPTTSSQP 361
Query: 368 AV-KSKRPRSI-------DIPASASAFWYQGSTQSHDITQVVGATEGQSSESQV-VRPMR 418
AV K+KRPR D P +A FW G TQ D+TQ+ TE + S+S +R
Sbjct: 362 AVIKNKRPRQASEVPDLGDTPLAAPTFWDAGLTQC-DMTQLRVMTESKRSDSSSHMRHHN 420
Query: 419 QKEIDSTIINN--------------NSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVER 464
K ++ I N ++TDD++ + A + + S R N ++V++
Sbjct: 421 SKSNNNGISMNQTEASWLSSPQLYQDTTDDNKSILAWPISKPH--SERLNNDHFLDQVDK 478
Query: 465 G-KKSEASLGCWLFGIDL-KHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQD 522
K EA+ LFGIDL H N + + SGV + + ++ ++
Sbjct: 479 NINKVEAATSYRLFGIDLIDHARNNSLSV--------ENASGVASECKTDVNHESDLSKA 530
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
KE + VS KETQ+KQ +R+ TKVQMQG+AVGRAVDLT L GYD L DELEK
Sbjct: 531 SKEWNQEQLLVSPKETQSKQ---VCSRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEK 587
Query: 583 MFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK- 641
MF+I+GQL+ R+KW VFTDDEGDMML GDD WPEFC MVK+IFI S+++V +++ SK
Sbjct: 588 MFDIKGQLQHRNKWETVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVHKLSSGSKL 647
Query: 642 PIASSVEGEGTAISLDS 658
PI+S E ISL++
Sbjct: 648 PISSMGE---IVISLNT 661
>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 602
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/635 (59%), Positives = 439/635 (69%), Gaps = 74/635 (11%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPSKILCRV 81
LY ELWK CAGPLVEVPR ERV+YFPQGH+EQL ASTNQ + +E P+FDLP KILCRV
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRV 81
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ + L AE ETDEVYAQITL PE DQ+EP S D + P KQ HSF KILTASDTSTHG
Sbjct: 82 LDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHG 141
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLRKHATECLP LDMT ATPTQEL +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV
Sbjct: 142 GFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFV 201
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAFVFLRGENG+LRVGVRRLA QS+MP+SVISSQSMHLGVLATA+HAV+T+
Sbjct: 202 SSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTT 261
Query: 262 TLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
T+F+V+YKPR SQFI+G+NKY+EA+ H FS+G RF+MRFEGE+SPER FTGTIVG GD S
Sbjct: 262 TIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLS 321
Query: 322 EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPAVKSKRPR---- 375
QWP SKWRSL++QWDEP TVQRP++VSPWEIEPF+A++P++ QP K KR R
Sbjct: 322 SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEP 381
Query: 376 SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDH 435
S+ PA S F Y P Q I++++
Sbjct: 382 SVKTPAPPS-FLYS-------------------------LPQSQDSINASLKLFQDPSLE 415
Query: 436 RIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKV 495
RI S + + P T + LFG DL NS P ++
Sbjct: 416 RISGGYSSNNSFKPETPPPPT--------------NCSYRLFGFDLTSNSPAPIPQDKQP 461
Query: 496 VDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQ 555
+D G+A+ + + S E + +Q S R+RTKVQ
Sbjct: 462 MD-------TCGAAKC---------------QEPITPTSMSEQKKQQTS----RSRTKVQ 495
Query: 556 MQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
MQGIAVGRAVDLT LK YD+L DELE+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W
Sbjct: 496 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPW 555
Query: 616 PEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
EFCKM KKIFIYS++EVK M T K I+SS+E E
Sbjct: 556 NEFCKMAKKIFIYSSDEVKKMTTKLK-ISSSLENE 589
>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 613
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/670 (57%), Positives = 449/670 (67%), Gaps = 90/670 (13%)
Query: 1 MAYVE--PNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEA 58
MA VE +FG SS LY ELWK CAGPLVEVPR ERV+YFPQGH+EQL A
Sbjct: 1 MASVEGDDDFG---SSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVA 57
Query: 59 STNQELTHQE-PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL 117
STNQ + +E P+FDLP KILCRV+ + L AE ETDEVYAQITL PE DQ+EP S D +
Sbjct: 58 STNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPI 117
Query: 118 PEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYE 177
P KQ HSF KILTASDTSTHGGFSVLRKHATECLP LDMT ATPTQEL +DLHG+E
Sbjct: 118 VGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFE 177
Query: 178 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMP 237
WRFKHIFRGQPRRHLLTTGWSTFV+SKRLVAGDAFVFLRGENG+LRVGVRRLA QS+MP
Sbjct: 178 WRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMP 237
Query: 238 SSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFK 297
+SVISSQSMHLGVLATA+HAV+T+T+F+V+YKPR SQFI+G+NKY+EA+ H FS+G RF+
Sbjct: 238 TSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQFIVGVNKYMEAIKHGFSLGTRFR 297
Query: 298 MRFEGEDSPER-----------RFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPE 346
MRFEGE+SPER RFTGTIVG GD S QWP SKWRSL++QWDEP TVQRP+
Sbjct: 298 MRFEGEESPERIVLDSETWNVFRFTGTIVGSGDLSSQWPASKWRSLQVQWDEPTTVQRPD 357
Query: 347 RVSPWEIEPFVASAPLNLA--QPAVKSKRPR----SIDIPASASAFWYQGSTQSHDITQV 400
+VSPWEIEPF+A++P++ QP K KR R S+ PA S F Y
Sbjct: 358 KVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPPS-FLYS----------- 405
Query: 401 VGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHE 460
P Q I++++ RI S + + P T
Sbjct: 406 --------------LPQSQDSINASLKLFQDPSLERISGGYSSNNSFKPETPPPPT---- 447
Query: 461 EVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQN 520
+ LFG DL NS P ++ +D G+A+
Sbjct: 448 ----------NCSYRLFGFDLTSNSPAPIPQDKQPMD-------TCGAAKC--------- 481
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
+ + S E + +Q S R+RTKVQMQGIAVGRAVDLT LK YD+L DEL
Sbjct: 482 ------QEPITPTSMSEQKKQQTS----RSRTKVQMQGIAVGRAVDLTLLKSYDELIDEL 531
Query: 581 EKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
E+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W EFCKM KKIFIYS++EVK M T
Sbjct: 532 EEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKL 591
Query: 641 KPIASSVEGE 650
K I+SS+E E
Sbjct: 592 K-ISSSLENE 600
>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/668 (58%), Positives = 467/668 (69%), Gaps = 46/668 (6%)
Query: 11 SLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
SL+ GG +LY +LWKACAGP VEVPR G+RV+YFPQGH+EQLE STNQEL + PL
Sbjct: 2 SLNRGGGGEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPL 61
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCK 130
F LPSKILCRVV++ LLAEQETDEVYAQITL PE++Q EP SPD C E P VHSFCK
Sbjct: 62 FKLPSKILCRVVNVHLLAEQETDEVYAQITLVPESNQAEPMSPDPCPAELPSPRVHSFCK 121
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
+LTASDTSTHGGFSVLRKHATECLP LDM+ +TPTQEL AKDL GYEWRFKHIFRGQPRR
Sbjct: 122 VLTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRR 181
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FVTSKRLVAGD FVFLRG NGELRVGVRR+A QSSMPSSVISSQSMHLGV
Sbjct: 182 HLLTTGWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGV 241
Query: 251 LATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE--R 308
LATA+HAV T TLF+VYYKPR SQFI+ +NKYLEA++ +VGMRFK RFEG++SPE +
Sbjct: 242 LATASHAVATQTLFVVYYKPRASQFIVSVNKYLEAINQKCNVGMRFKTRFEGDESPENYK 301
Query: 309 RFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ-P 367
RF+GTIVGV D S W S WRSLK+QWDEPA+ RP+RV PWEIEP +AS P +Q
Sbjct: 302 RFSGTIVGVEDISPHWVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSSQTA 361
Query: 368 AVKSKRPRSI-------DIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQK 420
A+K+KRPR D P + FW G TQS V A +S S + K
Sbjct: 362 AIKNKRPRQASELADLGDTPLAFPTFWDAGLTQSDMAKLSVMAEIKRSDSSSHMWHHNSK 421
Query: 421 EIDSTIINN---------------NSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERG 465
++ I N ++TDD + ++A + + S R N ++V++
Sbjct: 422 SSNNGISMNQTEASWLSSPSQLYHDTTDDSKSISAWPISKPH--SERLNNDHFLDQVDKE 479
Query: 466 -KKSEASLGCWLFGIDL----KHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQN 520
K EA+ LFGIDL ++NS +A SG+ + + + +
Sbjct: 480 INKVEAATSYRLFGIDLIDHARNNSLSAE-----------NASGITSECKIDVNHVSDIS 528
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
+ KE + +S KETQ+KQ +R+ TKVQMQG+AVGRAVDLT L GYD L DEL
Sbjct: 529 KASKEWNQEQLQLSPKETQSKQ---VCSRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDEL 585
Query: 581 EKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
EKMF+I+GQL+ R+KW +VFTDDEGDMML GDD W EFCKMV++IFIYS+++V +++ S
Sbjct: 586 EKMFDIKGQLQLRNKWEIVFTDDEGDMMLVGDDPWLEFCKMVRRIFIYSSQDVHKLSSGS 645
Query: 641 KPIASSVE 648
K SS+E
Sbjct: 646 KLPISSME 653
>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
Length = 666
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/683 (57%), Positives = 484/683 (70%), Gaps = 53/683 (7%)
Query: 7 NFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTH 66
N G ++S++ G G D ELWKA AGPLV+VP G+ V+YFPQGH+EQLEASTNQEL
Sbjct: 3 NHGSNVSAEVG-GCSD--EELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQ 59
Query: 67 QEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH 126
+ P+ LP+KILCR+V+I LLAEQETDEVYAQITL PE++Q EP PD E P+ +H
Sbjct: 60 RIPVLKLPTKILCRIVNIHLLAEQETDEVYAQITLVPESNQNEPTIPDPPTEELPRPKIH 119
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SFCKILTASDTSTHGGFSVLRKHATECLPPLDM+ TPTQEL AKDLHGYEWRFKHIFRG
Sbjct: 120 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRG 179
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWSTFVTSKRLVAGD FVFL GENGELRVGVRRLA Q SSMPSSVISSQSM
Sbjct: 180 QPRRHLLTTGWSTFVTSKRLVAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVISSQSM 238
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
HLGVLATA+HAV T TLF+VYYKPRTSQFI+ +NKYL AV + F+VGMRF+MRFE +DS
Sbjct: 239 HLGVLATASHAVATQTLFVVYYKPRTSQFIVSVNKYLSAVSNKFAVGMRFRMRFESDDSA 298
Query: 307 E--RRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
E +RF+GTIVGV D S W SKWRSLK+QWDEP+ + RP+RVSPWEIEPFV+SA
Sbjct: 299 ESDKRFSGTIVGVEDISPHWANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVSSASTAT 358
Query: 365 AQP-AVKSKRPR------SIDIPASASAFWYQGSTQSHDITQVV-------GATEGQSSE 410
QP A K+KRPR +D ++AS FW +Q+ D+TQ + AT +E
Sbjct: 359 VQPTAAKTKRPRPTSEIPDVDTTSAASIFWDARMSQT-DMTQRIMNSKTNNNATLRNQTE 417
Query: 411 SQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIH-----EEVERG 465
+ R + +++TDD + V+A V +P +++++ ++VE+
Sbjct: 418 GSWLSSPRSSYPSHLL--HDTTDDGKSVSAWPV-------SQPQSSILNIDRMLDQVEKD 468
Query: 466 KKSEASLGCWLFGIDLKHNSNTAAPL---------GRKVVDPTTGTSGVKGSARAASDFD 516
K E + LFGIDL +S +A + G V + ++ SD
Sbjct: 469 NKVETATTYRLFGIDLIDHSKKSAAVEIPSSHAVNGNGVTTEVSSSTLSSSDTARKSDIS 528
Query: 517 ASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDL 576
+ + +E ++ VS KETQ+KQ +R+RTKVQMQG+AVGRAVDL L GYD L
Sbjct: 529 KASFERKQEPQQ----VSPKETQSKQ---ICSRSRTKVQMQGVAVGRAVDLATLNGYDQL 581
Query: 577 FDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
ELE++F+I+GQL+ R+ W +VFTDDEGDMML GDD WPEFC MV++IFI S+++VK M
Sbjct: 582 IGELEELFDIKGQLQHRNTWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 641
Query: 637 ATSSK-PIASSVEGEGTAISLDS 658
+ SK PI+SS+E EGT IS D+
Sbjct: 642 KSGSKLPISSSIE-EGTVISSDT 663
>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 669
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/676 (57%), Positives = 477/676 (70%), Gaps = 53/676 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELWK AGPLVE+PR E+V YFPQGH+EQLEASTNQEL + PLF+LP KILC+VV
Sbjct: 1 ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLFNLPXKILCQVVDTR 60
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
LLAEQ++DEVYAQITL PE +Q P + + L E K VHSFCK+LTASDTSTHGGFSV
Sbjct: 61 LLAEQDSDEVYAQITLMPEANQALPSTFEPPLIECRKTKVHSFCKVLTASDTSTHGGFSV 120
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
LRKHATECLPPLDMT TPTQEL AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR
Sbjct: 121 LRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 180
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFI 265
LVAGD+FVFLRGENGELRVGVRRLA QQSSMPSSVISS SMHLGVLATA+HAV T T F+
Sbjct: 181 LVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFV 240
Query: 266 VYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWP 325
VYYKPR SQFI+ L+KY+EA+++ F VGMRFKMRFEGE+SPERRF+GTIVGV D S WP
Sbjct: 241 VYYKPRASQFIVSLSKYMEAMNNKFMVGMRFKMRFEGEESPERRFSGTIVGVDDMSPHWP 300
Query: 326 GSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR-SIDIP---- 380
S+WRSL++QWDE A++QRP+RVSPWEIEPFVA P +VK+KRPR ++IP
Sbjct: 301 NSEWRSLRVQWDELASIQRPDRVSPWEIEPFVAPTPSIPHSISVKNKRPRPPLEIPDSDN 360
Query: 381 ASASAFWYQGSTQSHDITQV-VGATEGQSSESQVVRPMRQKEI--DSTIINNNSTDDHRI 437
++ + + GST D TQ+ V A E + E+ +Q + + ++ + + +
Sbjct: 361 STVTTLRHPGSTSHDDRTQLSVSAAELKRFENHATWHYKQTDAGGNGNSVSRTAMEGSWL 420
Query: 438 VAAQSVLSGYA--------------SSGRPGNTVIHEEV-----------------ERGK 466
++ +S + S+ PG H E+GK
Sbjct: 421 ASSSGCVSQHRLQDLIDDRKSGSVWSTVFPGQLAAHSTCPTPRSSNTKSDQVQDLGEKGK 480
Query: 467 KSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDL--- 523
K+EAS C LFGI+L ++S + R P + + + +A QN +L
Sbjct: 481 KAEASPSCRLFGIELINHSKSPVLTERAADQPNSTPNEIT---------EAEQNSNLPKI 531
Query: 524 -KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
KE K G+ V KE Q+KQ S+ S+R+RTKVQMQG+AVGRAVDLT L+GY L DELEK
Sbjct: 532 SKERKLGLLQVPPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEK 591
Query: 583 MFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKP 642
MF+I+G+LRPR+KW +VFTDDEGDMML GD W EFC MV++I+I+S+++VK M + SK
Sbjct: 592 MFDIKGELRPRNKWEIVFTDDEGDMMLMGDYPWQEFCNMVRRIYIWSSQDVK-MGSVSKL 650
Query: 643 IASSVEGEGTAISLDS 658
S++E EGT I+ +S
Sbjct: 651 AMSALECEGTVITSES 666
>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/669 (55%), Positives = 451/669 (67%), Gaps = 79/669 (11%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA V+ +F S S+ LY ELWKACAGPLVEVPR+ ERV+YFPQGH+EQL AST
Sbjct: 1 MANVDADFRTSRSNDD-----QLYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVAST 55
Query: 61 NQELTHQE-PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE 119
NQ + QE P+F+LP KILCRV+ + L AE ETDEVYAQITL PE DQ+EP S D L E
Sbjct: 56 NQGVVDQEIPVFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE 115
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
P K TV SF KILTASDTSTHGGFSVLRKHATECLP LDMT TPTQEL A+DLHGYEWR
Sbjct: 116 PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 175
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG+ G+LRVGVRRLA QQS+MP+S
Sbjct: 176 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQSTMPAS 235
Query: 240 VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMR 299
VISSQSM LGVLATA+HAV T+T+F+V+YKPR SQFII +NKY+ A+ + FS+GMRF+MR
Sbjct: 236 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMVAMKNGFSLGMRFRMR 295
Query: 300 FEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
FEGE+SPER FTGTIVG GD S QWP SKWRSL+IQWDEP+++ RP +VSPWEIEPF S
Sbjct: 296 FEGEESPERIFTGTIVGSGDLSSQWPASKWRSLQIQWDEPSSIPRPNKVSPWEIEPFSPS 355
Query: 360 A--PLNLAQPAVKSKRPRSIDIPASASAFWYQGS-TQSHDITQVVGATEGQSSESQVVRP 416
A P Q + KSKR R I+I S +A + S QSH+ V
Sbjct: 356 ALTPTPTQQQS-KSKRSRPIEITGSPAASNFLSSFPQSHESNPSV--------------- 399
Query: 417 MRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLG--C 474
+L ++ R N + + KK+EA + C
Sbjct: 400 -------------------------KLLFHDIATERNSNKSVFSSGLQCKKTEAPVTSCC 434
Query: 475 WLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 533
LFG DL +A P ++++ S + ++ + D
Sbjct: 435 RLFGFDLTSKPASAPIPCNKQLI---------------------SVDSNISDSTPKCQDP 473
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR 593
+ + +Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P+
Sbjct: 474 NSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPK 533
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTA 653
DKW +VFTDDEGDMML GDD W EFCKM KK+FIY ++EVK +++ S + EGT
Sbjct: 534 DKWTIVFTDDEGDMMLVGDDPWNEFCKMAKKLFIYPSDEVKKLSSKSL-----LPDEGTI 588
Query: 654 ISLDSELKS 662
+ L+S+ ++
Sbjct: 589 VYLESDQRT 597
>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
Length = 584
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/621 (59%), Positives = 433/621 (69%), Gaps = 68/621 (10%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPSKILCRV 81
LY ELWKACAGPLVEVPR ERV+YFPQGH+EQL ASTNQ + ++ P+F+LP KILCRV
Sbjct: 9 LYMELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVFNLPPKILCRV 68
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++ L AE ETDEVYAQITL PE DQ+EP S D L EP KQTV SF KILTASDTSTHG
Sbjct: 69 LNVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLTEPAKQTVDSFVKILTASDTSTHG 128
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLRKHATECLPPLDMT ATPTQEL A+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFV
Sbjct: 129 GFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 188
Query: 202 TSKRLVAGDAFVFLRG-ENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
TSKRLVAGDAFVFLRG + G+LRVGVRRLA QQS+MP+SVISSQSMHLGVLATA+HA T
Sbjct: 189 TSKRLVAGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLGVLATASHAFNT 248
Query: 261 STLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+T+F+V YKPR SQFII +NKY+ A+ F +GMRF+MRFEGE+SPER FTGTIVG GD
Sbjct: 249 TTMFVVLYKPRISQFIISVNKYMAAMKKGFGIGMRFRMRFEGEESPERIFTGTIVGTGDL 308
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA-PLNLAQPAVKSKRPRSIDI 379
S QWP SKWRSL++QWDE +TVQRP +VSPWEIEPF+ S + QP KSKR R ID
Sbjct: 309 SPQWPASKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQPYSKSKRSRPID- 367
Query: 380 PASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVA 439
++++ G+ + S+ + H
Sbjct: 368 ---------------PSVSEITGSPVASNFLSRFPK------------------SHEPSP 394
Query: 440 AQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPT 499
+ +L SS R N ++ A+ C LFG DLK + +AP
Sbjct: 395 SLKLLFQDPSSERNSNKT---------EAPATSCCRLFGFDLK-SKPASAPNPNDKQQLI 444
Query: 500 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
+ S GSA+ D + ++D K+ +STR+RTKVQMQG
Sbjct: 445 SVDSNNTGSAKCQ---DPNSSKDQKQ------------------QTSSTRSRTKVQMQGT 483
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFC 619
AVGRAVDLT L+ YD+L ELEKMFEI+G+LR +DKWA+VFTDDEGDMML GDD W EFC
Sbjct: 484 AVGRAVDLTLLRSYDELIRELEKMFEIEGELRTKDKWAIVFTDDEGDMMLVGDDPWDEFC 543
Query: 620 KMVKKIFIYSTEEVKNMATSS 640
KM KK+FIYS++EVK M++ S
Sbjct: 544 KMAKKLFIYSSDEVKKMSSKS 564
>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
Length = 629
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/622 (58%), Positives = 441/622 (70%), Gaps = 36/622 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTH---QEPLFDLPSKILC 79
+Y ELWK CAGP+V+VP+ ERV+YFPQGH+EQLEAST Q+L +PLFDLP KILC
Sbjct: 7 MYGELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTKPLFDLPPKILC 66
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
RV+ + L AE++TDEVYAQI L PE EP SPD PE + VHSF K+LTASDTST
Sbjct: 67 RVMDVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPSPPESQRPKVHSFSKVLTASDTST 126
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSVLRKHATECLPPLDMT TPTQEL A+D+HGY+W+FKHIFRGQPRRHLLTTGWST
Sbjct: 127 HGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWST 186
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FVT+KRLVAGD FVFLRGENGELRVGVRR QQ++MPSSVISS SMHLGVLATA HA +
Sbjct: 187 FVTAKRLVAGDTFVFLRGENGELRVGVRRANRQQTNMPSSVISSHSMHLGVLATACHATQ 246
Query: 260 TSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T ++F VYYKPRTSQFII LNKYLEA+ + FSVG+RFKMRFEGEDSPERRF+GT+VGV D
Sbjct: 247 TRSMFTVYYKPRTSQFIISLNKYLEAMSNKFSVGIRFKMRFEGEDSPERRFSGTVVGVKD 306
Query: 320 FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV-KSKRPRSID 378
S W S WR L++ WDEPA++ RP++VSPWEIEPFV S N+ + K+KRPR
Sbjct: 307 CSTHWKDSNWRCLEVHWDEPASISRPDKVSPWEIEPFVTSE--NVPHSVMPKNKRPRHYS 364
Query: 379 ----IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDD 434
+ +AS W TQSH+ Q T ++S Q R ++T+D
Sbjct: 365 EVSALGKTASNLWSSALTQSHEFAQSC-ITSQRNSPQQCYR--------------DATED 409
Query: 435 HRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK 494
A S S S N ++ VE+ KK E + LFGIDL +S P +
Sbjct: 410 ----AKNSDWSASPYSATLNNQMVF-PVEQ-KKPETTASYRLFGIDLLSSS---IPATEE 460
Query: 495 VVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKV 554
PT + K + + SD + ++ +E K+ A S KE Q+K+ S STR+RTKV
Sbjct: 461 KTAPTLPINITKPTPDSNSDPKSEVSKLSEEKKQEPAQASSKEVQSKEIS--STRSRTKV 518
Query: 555 QMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQ 614
QMQG+ VGRAVDLT L GY +L D+LEK+F+I+G+L+ R++W +VFTDDEGDMML GDD
Sbjct: 519 QMQGVPVGRAVDLTVLNGYSELIDDLEKLFDIEGELKSRNQWEIVFTDDEGDMMLVGDDP 578
Query: 615 WPEFCKMVKKIFIYSTEEVKNM 636
WPEFC MVK+IFI+S EEVK M
Sbjct: 579 WPEFCNMVKRIFIWSKEEVKKM 600
>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/617 (62%), Positives = 448/617 (72%), Gaps = 83/617 (13%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
DLY ELWKACAGPLV+VP+ GERV+YFPQGH+EQLEASTNQEL + PLF+LPSKILCRV
Sbjct: 2 DLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRV 61
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+H +LLAEQ+TDEVYAQITL PE+DQ EP SPD EPP+ TVHSFCK+LTASDTSTHG
Sbjct: 62 IHTQLLAEQDTDEVYAQITLIPESDQIEPTSPDSSSSEPPRPTVHSFCKVLTASDTSTHG 121
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLRKHATECLPPLDMT TPTQEL AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV
Sbjct: 122 GFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 181
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
TSKRLVAGD+FVFLRGENGELRVGVRR+A QQSSMPSSVISSQSMHLGVLATA+HAV T
Sbjct: 182 TSKRLVAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVSTL 241
Query: 262 TLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
TLF+VYYKPRTSQFII LNKYLEAV + F VGMRFKMRFEGEDSP+RRF+GTIVGV DFS
Sbjct: 242 TLFVVYYKPRTSQFIISLNKYLEAVSNKFVVGMRFKMRFEGEDSPDRRFSGTIVGVEDFS 301
Query: 322 EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPA 381
W SKWRSLK+QWDEPA + RP+RVSPWEI +P V S +P
Sbjct: 302 PHWNDSKWRSLKVQWDEPAPIPRPDRVSPWEI------------EPCVAS-------VPT 342
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQ 441
+ S Q TQ + RP EI +
Sbjct: 343 NLS----QPVTQKNK------------------RPRPPFEIPAL---------------- 364
Query: 442 SVLSGYAS--SGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPT 499
GY++ S + N I + ++G+KSE LFGIDL ++S+++ P
Sbjct: 365 ----GYSTPLSSKSKNDAILDPSDKGRKSEVPTSYRLFGIDLVNHSSSSTP--------- 411
Query: 500 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
++ A+ S S+ Q +++++ S KE Q+KQ S+ STR+RTKVQMQGI
Sbjct: 412 -----IEVPAQLMSICSVSKEQKPEQLQK-----SPKEIQSKQ-SSTSTRSRTKVQMQGI 460
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFC 619
AVGRAVDLT LKGY L DELE++F+I+GQL PRDKW +V+TDDEGDMML GDD WPEFC
Sbjct: 461 AVGRAVDLTMLKGYSQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFC 520
Query: 620 KMVKKIFIYSTEEVKNM 636
MV++I+I S+++VK M
Sbjct: 521 NMVRRIYICSSQDVKRM 537
>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 601
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/668 (55%), Positives = 453/668 (67%), Gaps = 76/668 (11%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA VE +F S G +LY ELWKACAGPLVEVPR GERV+YFPQGH+EQL AST
Sbjct: 1 MANVEADFRTS-----GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVAST 55
Query: 61 NQELTHQE-PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE 119
NQ + QE P+F+LP KILCRV+ + L AE ETDEVYAQITL PE DQ+EP S D L E
Sbjct: 56 NQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE 115
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
P K TV SF KILTASDTSTHGGFSVLRKHATECLP LDMT TPTQEL A+DLHGYEWR
Sbjct: 116 PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 175
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGE G+LRVGVRRLA QQS+MP+S
Sbjct: 176 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 235
Query: 240 VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMR 299
VISSQSM LGVLATA+HAV T+T+F+V+YKPR SQFII +NKY+ A+ + FS+GMR++MR
Sbjct: 236 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMR 295
Query: 300 FEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
FEGE+SPER FTGTI+G GD S QWP SKWRSL+IQWDEP+++QRP +VSPWEIEPF S
Sbjct: 296 FEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPS 355
Query: 360 A--PLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPM 417
A P Q + KSKR R I+++ G+ P+
Sbjct: 356 ALTPTPTQQQS-KSKRSRP--------------------ISEITGS------------PV 382
Query: 418 RQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASL--GCW 475
++ ++ + H + +L ++ R N + + K +EA + C
Sbjct: 383 ------ASSFLSSFSQSHESNPSVKLLFQDPATERNSNKSVFSSGLQCKITEAPVTSSCR 436
Query: 476 LFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVS 534
LFG DL +A P ++++ S + ++ + D +
Sbjct: 437 LFGFDLTSKPASATIPHDKQLI---------------------SVDSNISDSTTKCQDPN 475
Query: 535 RKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRD 594
+ +Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P+D
Sbjct: 476 SSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKD 535
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAI 654
KWA+VFTDDEGD ML GDD W EFCKM KK+FIY ++EVK M + S + +GT +
Sbjct: 536 KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSL-----LGDKGTIV 590
Query: 655 SLDSELKS 662
+L+S+ ++
Sbjct: 591 NLESDQRT 598
>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
Length = 601
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/668 (55%), Positives = 448/668 (67%), Gaps = 76/668 (11%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA VE +F S G +LY ELWKACAGPLVEVPR GERV+YFPQGH+EQL AST
Sbjct: 1 MANVEADFRTS-----GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVAST 55
Query: 61 NQELTHQE-PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE 119
NQ + QE P+F+LP KILCRV+ + L AE ETDEVYAQITL PE DQ+EP S D L E
Sbjct: 56 NQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE 115
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
P K V SF KILTASDTSTHGGFSVLRKHATECLP LDMT TPTQEL A+DLHGYEWR
Sbjct: 116 PAKPAVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 175
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGE G+LRVGVRRLA QQS+MP+S
Sbjct: 176 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 235
Query: 240 VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMR 299
VISSQSM LGVLATA+HAV T+T+F+V+YKPR SQFII +NKY+ A+ + FS+GMR++MR
Sbjct: 236 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMR 295
Query: 300 FEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
FEGE+SPER FTGTI+G GD S QWP SKWRSL+IQWDEP+++QRP +VSPWEIEPF S
Sbjct: 296 FEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPS 355
Query: 360 A--PLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPM 417
A P Q + KSKR R I+++ G+ S S
Sbjct: 356 ALTPTPTQQQS-KSKRSRP--------------------ISEITGSPVASSFLSS----- 389
Query: 418 RQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASL--GCW 475
+ H + +L ++ R N + + K +EA + C
Sbjct: 390 -------------FSQSHESNPSVKLLFQDPATERNSNKSVFSSGLQCKITEAPVTSSCR 436
Query: 476 LFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVS 534
LFG DL +A P ++++ S + ++ + D +
Sbjct: 437 LFGFDLTSKPASATIPHDKQLI---------------------SVDSNISDSTTKCHDPN 475
Query: 535 RKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRD 594
+ +Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P+D
Sbjct: 476 SSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKD 535
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAI 654
KWA+VFTDDEGD ML GDD W EFCKM KK+FIY ++EVK M + S + +GT +
Sbjct: 536 KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSL-----LGDKGTIV 590
Query: 655 SLDSELKS 662
+L+S+ ++
Sbjct: 591 NLESDQRT 598
>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 622
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/652 (55%), Positives = 443/652 (67%), Gaps = 71/652 (10%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPS 75
G +LY ELWKACAGPLVEVPR GERV+YFPQGH+EQL ASTNQ + QE P+F+LP
Sbjct: 33 GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPP 92
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILCRV+ + L AE ETDEVYAQITL PE DQ+EP S D L EP K TV SF KILTAS
Sbjct: 93 KILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTAS 152
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLRKHATECLP LDMT TPTQEL A+DLHGYEWRFKHIFRGQPRRHLLTT
Sbjct: 153 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTT 212
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWSTFVTSKRLVAGDAFVFLRGE G+LRVGVRRLA QQS+MP+SVISSQSM LGVLATA+
Sbjct: 213 GWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATAS 272
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
HAV T+T+F+V+YKPR SQFII +NKY+ A+ + FS+GMR++MRFEGE+SPER FTGTI+
Sbjct: 273 HAVTTTTIFVVFYKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTII 332
Query: 316 GVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA--PLNLAQPAVKSKR 373
G GD S QWP SKWRSL+IQWDEP+++QRP +VSPWEIEPF SA P Q + KSKR
Sbjct: 333 GSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQQS-KSKR 391
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTD 433
R I+++ G+ S S + +
Sbjct: 392 SRP--------------------ISEITGSPVASSFLS------------------SFSQ 413
Query: 434 DHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASL--GCWLFGIDLKHNSNTAA-P 490
H + +L ++ R N + + K +EA + C LFG DL +A P
Sbjct: 414 SHESNPSVKLLFQDPATERNSNKSVFSSGLQCKITEAPVTSSCRLFGFDLTSKPASATIP 473
Query: 491 LGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT 550
++++ S + ++ + D + + +Q STR+
Sbjct: 474 HDKQLI---------------------SVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 512
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLA 610
R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P+DKWA+VFTDDEGD ML
Sbjct: 513 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLV 572
Query: 611 GDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKS 662
GDD W EFCKM KK+FIY ++EVK M + S + +GT ++L+S+ ++
Sbjct: 573 GDDPWNEFCKMAKKLFIYPSDEVKKMRSKSL-----LGDKGTIVNLESDQRT 619
>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 638
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/627 (60%), Positives = 452/627 (72%), Gaps = 30/627 (4%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQ-ELTHQEPLFDLPSKI 77
G LY ELWK CAGPLV+VP+ ERVYYFPQGH+EQLEAST Q +L +PLF LP KI
Sbjct: 5 GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKI 64
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPE-TDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
LC V+++ L AE++TDEVYAQITL P T+ EP SPD PE + VHSF K+LTASD
Sbjct: 65 LCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASD 124
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLRKHATECLPPLDMT TPTQEL A+D+HGY+W+FKHIFRGQPRRHLLTTG
Sbjct: 125 TSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTG 184
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WSTFVTSKRLVAGD FVFLRGENGELRVGVRR QQSSMPSSVISS SMHLGVLATA H
Sbjct: 185 WSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARH 244
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
A +T T+FIVYYKPRTSQFII LNKYLEA+ + FSVGMRFKMRFEGEDSPERR++GT++G
Sbjct: 245 ATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIG 304
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPR 375
V D S W SKWR L++ WDEPA++ RP +VSPWEIEPFV S N+ + +K+KRPR
Sbjct: 305 VKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPR 362
Query: 376 ------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
++D+ +AS W TQ H+ Q T SS Q R + S +NN
Sbjct: 363 QVSEVSALDVGITASNLWSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAKKSDWLNN 421
Query: 430 NSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAA 489
+ + + VA S L N + VE+ KK E + LFGIDL +S+ A
Sbjct: 422 SYSVSN--VAKDSTL----------NDQMVSPVEQ-KKPETTANYRLFGIDL-MSSSLAV 467
Query: 490 PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTR 549
P + P + K + + SD + ++ +E K+ A+ S KE Q+KQ S STR
Sbjct: 468 PEEKTA--PMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSS--STR 523
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMML 609
+RTKVQMQG+ VGRAVDL ALKGY++L D++EK+F+I+G+LR R++W +VFTDDEGDMML
Sbjct: 524 SRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMML 583
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNM 636
GDD WPEFC MVK+IFI+S EEVK M
Sbjct: 584 VGDDPWPEFCNMVKRIFIWSKEEVKKM 610
>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 636
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/625 (60%), Positives = 450/625 (72%), Gaps = 28/625 (4%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQ-ELTHQEPLFDLPSKI 77
G LY ELWK CAGPLV+VP+ ERVYYFPQGH+EQLEAST Q +L +PLF LP KI
Sbjct: 5 GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKI 64
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPE-TDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
LC V+++ L AE++TDEVYAQITL P T+ EP SPD PE + VHSF K+LTASD
Sbjct: 65 LCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASD 124
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLRKHATECLPPLDMT TPTQEL A+D+HGY+W+FKHIFRGQPRRHLLTTG
Sbjct: 125 TSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTG 184
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WSTFVTSKRLVAGD FVFLRGENGELRVGVRR QQSSMPSSVISS SMHLGVLATA H
Sbjct: 185 WSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARH 244
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
A +T T+FIVYYKPRTSQFII LNKYLEA+ + FSVGMRFKMRFEGEDSPERR++GT++G
Sbjct: 245 ATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIG 304
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPR 375
V D S W SKWR L++ WDEPA++ RP +VSPWEIEPFV S N+ + +K+KRPR
Sbjct: 305 VKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPR 362
Query: 376 SID----IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNS 431
+ + +AS W TQ H+ Q T SS Q R + S +NN+
Sbjct: 363 QVSEVSALGITASNLWSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAKKSDWLNNSY 421
Query: 432 TDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPL 491
+ + VA S L N + VE+ KK E + LFGIDL +S+ A P
Sbjct: 422 SVSN--VAKDSTL----------NDQMVSPVEQ-KKPETTANYRLFGIDL-MSSSLAVPE 467
Query: 492 GRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTR 551
+ P + K + + SD + ++ +E K+ A+ S KE Q+KQ S STR+R
Sbjct: 468 EKTA--PMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSS--STRSR 523
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
TKVQMQG+ VGRAVDL ALKGY++L D++EK+F+I+G+LR R++W +VFTDDEGDMML G
Sbjct: 524 TKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVG 583
Query: 612 DDQWPEFCKMVKKIFIYSTEEVKNM 636
DD WPEFC MVK+IFI+S EEVK M
Sbjct: 584 DDPWPEFCNMVKRIFIWSKEEVKKM 608
>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/630 (59%), Positives = 453/630 (71%), Gaps = 32/630 (5%)
Query: 19 GSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQ-ELTHQEPLFDLPSK 76
G G+ LY ELWK C+GPLV+VP+ ERVYYFPQGH+EQLEAST Q +L +PLF LP K
Sbjct: 2 GGGEYLYDELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPK 61
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHPE-TDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
ILC V+++ L AE++TDEVYAQITL P T+ P SPD PE + VHSF K+LTAS
Sbjct: 62 ILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDGPTSPDPSPPELQRPKVHSFSKVLTAS 121
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLRKHATECLPPLDMT TPTQEL A+D+HGY+W+FKHIFRGQPRRHLLTT
Sbjct: 122 DTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTT 181
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWSTFVTSKRLVAGD FVFLRGE GELRVGVRR QQSSMPSSVISS SMHLGVLATA
Sbjct: 182 GWSTFVTSKRLVAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATAR 241
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
HA +T T+FIVYYKPRTSQFII LNKYLEA+ + FSVGMRFKMRFEGEDSPERR++GT++
Sbjct: 242 HATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVI 301
Query: 316 GVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRP 374
GV D S W SKWR L++ WDEPA++ RP +VSPWEIEPFV S N+ + +K+KRP
Sbjct: 302 GVNDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVTSE--NVPKSVMLKNKRP 359
Query: 375 RSI-DIPA------SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTII 427
R + ++ A +AS W TQSH+ Q T SS Q R + S I
Sbjct: 360 RQVSEVSALDVGGITASNLWSSVLTQSHEFAQSC-ITSQWSSPQQCHRDANEDAKKSDWI 418
Query: 428 NNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNT 487
NN+ + + V+ S L N + VE+ KK E + LFGIDL +S
Sbjct: 419 NNSYSVSN--VSKDSTL----------NDQMVSPVEQ-KKPETTTNYRLFGIDLMSSSLA 465
Query: 488 AAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAAS 547
A+ + P + K + + SD + ++ +E K+ A+ S KE Q+KQ S S
Sbjct: 466 AS---EEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSS--S 520
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
TR+RTKVQMQG+ VGRAVDLTALKGY++L D++EK+F+I+G+L+ R++W +VFTDDEGDM
Sbjct: 521 TRSRTKVQMQGVPVGRAVDLTALKGYNELIDDIEKLFDIKGELQSRNQWEIVFTDDEGDM 580
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
ML GDD WPEFC MVK+IFI+S EEVK M
Sbjct: 581 MLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 610
>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 590
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/572 (61%), Positives = 413/572 (72%), Gaps = 37/572 (6%)
Query: 107 QTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQ 166
Q+EP+S D PE +QTV FCKILTASDTSTHGGFSVLRKHA ECLPPLDM+ +TPTQ
Sbjct: 1 QSEPQSADPEPPERTRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQ 60
Query: 167 ELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGV 226
ELAAKDLHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG+NGELRVGV
Sbjct: 61 ELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGV 120
Query: 227 RRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAV 286
RR A QQS MPSSVISS SMHLGVLATA+HAV+T T F+VYYKPRTSQFII LNKYLE V
Sbjct: 121 RRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQFIISLNKYLETV 180
Query: 287 HHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPE 346
+ + VGMRFKMRFEGE+SPERRFTGTIVGVGD S QW SKWRSLKIQWDEPAT+QRPE
Sbjct: 181 KNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDMSPQWSDSKWRSLKIQWDEPATIQRPE 240
Query: 347 RVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIP-------ASASAFWYQGSTQSHDITQ 399
RVSPWEIEPFV SA LN PA+KSKR R ++IP ++ S FW QGST SH+I+Q
Sbjct: 241 RVSPWEIEPFVPSASLNFTHPAIKSKRARPVEIPPPEVTSGSAPSGFWLQGSTISHEISQ 300
Query: 400 VVGATEGQSSESQVVRPMRQKEIDSTIINNN-----------------------STDDHR 436
+ G E QSS ++VV + Q+++DS + N ST +
Sbjct: 301 LSGTNEVQSSNNRVVWALGQRKLDSNSSHCNPVANVEGIWPSPPLNISLNLYPDSTFERE 360
Query: 437 IVAAQSVL----SGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLG 492
+V + L S +S + + +++E+G K + SLGC +FGIDLK+N + L
Sbjct: 361 LVQQKHPLSSPYSSSVTSKPSSDLIQPDQLEKGSKPDISLGCRIFGIDLKNNCSIVPTLE 420
Query: 493 RKVVDPTTGTSGVKG---SARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTR 549
R+ T G K +A DA + ++ ++ K TQ K S S+R
Sbjct: 421 RRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSKEQQLSTELLTKGTQTKHISNLSSR 480
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMML 609
TRTKVQMQG+AVGRAVDLT L+GY+DL DELE +FEI+G+LR +KW++VFTDDE DMML
Sbjct: 481 TRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTDDENDMML 540
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
GDD WPEFCKMVK+IFI S+EEVK M+ SK
Sbjct: 541 VGDDPWPEFCKMVKRIFICSSEEVKKMSRESK 572
>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
Length = 671
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/671 (54%), Positives = 448/671 (66%), Gaps = 37/671 (5%)
Query: 7 NFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTH 66
N +++S+ G + LY+ELW ACAGPLV +PR GERVYYFPQGH+EQLEAS NQ L
Sbjct: 4 NHMSAVTSRAGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQ 63
Query: 67 QEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH 126
Q P F+LPSKILC+VV+I L AE ETDEVYAQITL PETDQ+E SPD LPEPP+ TVH
Sbjct: 64 QMPSFNLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVH 123
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SFCK LTASDTSTHGGFSVLR+HA +CLPPLDMT P QEL A DLHG EW F+HIFRG
Sbjct: 124 SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRG 183
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWS FV+SK+LVAGDAF+FLRGENGELRVGVRRL QQS+MPSSVISS SM
Sbjct: 184 QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSM 243
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
HLGVLATA+HA+ T TLF V+YKPRT S+FI+ +NKYLEA +H SVGMRFKMRFEG++
Sbjct: 244 HLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDE 303
Query: 305 SPERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN 363
PERRF+GTIVGV D S W S+WRSLK+QWDEP+++ RP+RVSPWE+EP V++ P N
Sbjct: 304 VPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPAN 363
Query: 364 LAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEID 423
+QP ++KR R +P++ + QG +S + + Q P
Sbjct: 364 -SQPTQRNKRSRPPILPSTMTDSSLQGIWKSPADSPPFPYRDPQHGRDLYPSPRFSSTAT 422
Query: 424 STI-INNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
S + NS ++ + S L +S P + V EE ++ + GC LFGI L
Sbjct: 423 SFLGFGGNSPASNKSMYWSSRLE---NSTEPFSPVALEESGEKRQGTGN-GCRLFGIQLL 478
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV--------- 533
NSN L T SG G R+ D +Q + +D+
Sbjct: 479 ENSNAEESLQ------TAPLSGRVGDDRSVPSLDVESDQHSEPSNVNRSDIPSVSCDADK 532
Query: 534 ----SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQ 589
S +E+Q++Q R+ TKV MQG+AVGRAVDLT GY+DL +LE+MF+I+G+
Sbjct: 533 SCLRSPQESQSRQ-----IRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGE 587
Query: 590 L-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVE 648
L KW VV+TD+E DMM+ GDD W EFC +V+K+FIY+ EEVK + S I
Sbjct: 588 LCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKL---SPKIGLPSN 644
Query: 649 GEGTAISLDSE 659
EG LDSE
Sbjct: 645 EEGKPSKLDSE 655
>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/631 (57%), Positives = 422/631 (66%), Gaps = 101/631 (16%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPSKILCR 80
+LY ELWKACAGPLVEVP GE+V+YFPQGH+EQL ASTNQ + +E P F LP KILCR
Sbjct: 20 ELYTELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVASTNQGIESEEIPDFKLPPKILCR 79
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
V+ + L AE +TDEVYAQITL PE DQ+E S D L EP KQ HSF KILTASDTSTH
Sbjct: 80 VLSVMLKAEHDTDEVYAQITLKPEEDQSELTSLDPPLVEPTKQMFHSFVKILTASDTSTH 139
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSVLRKHATECLP LDM ATPTQEL +DLHG+EWRFKHIFRGQPRRHLLTTGWSTF
Sbjct: 140 GGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTF 199
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
V+SKRLVAGDAFVFLRGENG+LRVGVRRLA QS+MP+SVISSQSMHLGVLATA+HAV T
Sbjct: 200 VSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVVT 259
Query: 261 STLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
T+F+V+YKPR SQFI+G+NKY+EA+ H FS+G RF+MRFEGE+SPER FTGTIVG+GD
Sbjct: 260 KTIFLVFYKPRISQFIVGVNKYMEAMKHGFSLGTRFRMRFEGEESPERMFTGTIVGIGDL 319
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIP 380
S QWP S WRSL++QWDEP T QRP+RVSPWEIEPF L+ P V
Sbjct: 320 SSQWPASTWRSLQVQWDEPTTFQRPDRVSPWEIEPF-------LSSPPV----------- 361
Query: 381 ASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
+T Q S+ + R + ++S+++ A
Sbjct: 362 ----------------------STPAQQSQPKC---KRSRPVESSVLTP---------AP 387
Query: 441 QSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLG-RKVVDPT 499
S L G+ S +E AS LFG DL SN AP+ K +P
Sbjct: 388 PSFLYGFPQS---------QETPSPPPPSASSCYRLFGFDL--TSNPPAPIPPDKCQEPI 436
Query: 500 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
T ++ + + Q KQ RTRTKV MQG+
Sbjct: 437 TPSAA-----------------------------NEPKKQQKQ------RTRTKVIMQGV 461
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFC 619
AVGRAVDLT LK Y++L ELE+MFEI+GQL R+KW VVFTDDEGDMMLAGDD W EFC
Sbjct: 462 AVGRAVDLTLLKSYNELIKELEEMFEIKGQLLTREKWVVVFTDDEGDMMLAGDDPWNEFC 521
Query: 620 KMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
KM KKIFIYS++EVK M T K +SS+E +
Sbjct: 522 KMAKKIFIYSSDEVKKMTTMLKS-SSSLEND 551
>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
Length = 602
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/618 (57%), Positives = 428/618 (69%), Gaps = 45/618 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELWK AGPLV+VP+ ERVYYFPQGH+EQLEAST Q+L +PLFDLP KILCRV+
Sbjct: 1 MYEELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLFDLPPKILCRVM 60
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
++ L AE++TDEVYAQI L PE EP SPD PE K HSF K+LTASDTSTHGG
Sbjct: 61 NVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPSPPELQKPKFHSFTKVLTASDTSTHGG 120
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLRKHATECLPPLDMT TPTQEL A+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVT
Sbjct: 121 FSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLLTTGWSTFVT 180
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGD FVFLRGENGELRVGVRR QQSSMPSSVISS SMHLGVLATA HA +T +
Sbjct: 181 SKKLVAGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATACHATQTRS 240
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+F VYYKPRTSQFI+ L+KYLEA++ FSVGMRFKMRFEG+DSPERRF+GT+VGV D S
Sbjct: 241 MFTVYYKPRTSQFILSLHKYLEAMNSKFSVGMRFKMRFEGDDSPERRFSGTVVGVQDCSP 300
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID---- 378
W SKWRSL + WDEPA+ RP++VSPWE+EPF AS + P +KR R ++
Sbjct: 301 HWKDSKWRSLIVNWDEPASFTRPDKVSPWEMEPFAASENV----PQSVNKRARHVNEISA 356
Query: 379 IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIV 438
+ +S FW TQSH+ Q ++ N + V
Sbjct: 357 LGVPSSNFWSSALTQSHEFAQSCITSQ----------------------RNPPQNSDWPV 394
Query: 439 AAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDP 498
+ S L+G VE+ K + C LFGIDL +S P + P
Sbjct: 395 SPYSTLNGQMVF----------PVEQKKPETTTASCRLFGIDLMSSS---LPAHEEKTAP 441
Query: 499 TTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQG 558
+ K + + +D + ++ +E K+ A S KE Q+KQ S+R+RTKVQMQG
Sbjct: 442 MRPINITKPTLDSNADPKSEISKLSEEKKQEPAQASPKEVQSKQ--INSSRSRTKVQMQG 499
Query: 559 IAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEF 618
+ VGRAVDLT + GY +L D+LEK+F+I+G+L+ R++W +VFTDDEGDMML GDD WPEF
Sbjct: 500 VPVGRAVDLTLINGYVELIDDLEKLFDIEGELKSRNQWEIVFTDDEGDMMLVGDDPWPEF 559
Query: 619 CKMVKKIFIYSTEEVKNM 636
C MVK+IFI+S EEVK M
Sbjct: 560 CNMVKRIFIWSKEEVKKM 577
>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
[Medicago truncatula]
Length = 670
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/659 (54%), Positives = 440/659 (66%), Gaps = 41/659 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV +PR GERVYYFPQGH+EQLEAS NQ L Q P F+LPSKILC+VV
Sbjct: 15 LYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPSKILCKVV 74
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
+I L AE ETDEVYAQITL PETDQ+E SPD LPEPP+ TVHSFCK LTASDTSTHGG
Sbjct: 75 NIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVHSFCKTLTASDTSTHGG 134
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA +CLPPLDMT P QEL A DLHG EW F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 135 FSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 194
Query: 203 SKRLVAGDAFVFLR----GENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
SK+LVAGDAF+FLR GENGELRVGVRRL QQS+MPSSVISS SMHLGVLATA+HA+
Sbjct: 195 SKKLVAGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAI 254
Query: 259 KTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
T TLF V+YKPRT S+FI+ +NKYLEA +H SVGMRFKMRFEG++ PERRF+GTIVG
Sbjct: 255 STGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERRFSGTIVG 314
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
V D S W S+WRSLK+QWDEP+++ RP+RVSPWE+EP V++ P N +QP ++KR R
Sbjct: 315 VEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPAN-SQPTQRNKRSR 373
Query: 376 SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTI-INNNSTDD 434
+P++ + QG +S + + Q P S + NS
Sbjct: 374 PPILPSTMTDSSLQGIWKSPADSPPFPYRDPQHGRDLYPSPRFSSTATSFLGFGGNSPAS 433
Query: 435 HRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK 494
++ + S L +S P + V EE ++ + GC LFGI L NSN L
Sbjct: 434 NKSMYWSSRLE---NSTEPFSPVALEESGEKRQGTGN-GCRLFGIQLLENSNAEESLQ-- 487
Query: 495 VVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV-------------SRKETQNK 541
T SG G R+ D +Q + +D+ S +E+Q++
Sbjct: 488 ----TAPLSGRVGDDRSVPSLDVESDQHSEPSNVNRSDIPSVSCDADKSCLRSPQESQSR 543
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVF 600
Q R+ TKV MQG+AVGRAVDLT GY+DL +LE+MF+I+G+L KW VV+
Sbjct: 544 Q-----IRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVY 598
Query: 601 TDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSE 659
TD+E DMM+ GDD W EFC +V+K+FIY+ EEVK + S I EG LDSE
Sbjct: 599 TDNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKL---SPKIGLPSNEEGKPSKLDSE 654
>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 641
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/649 (57%), Positives = 450/649 (69%), Gaps = 59/649 (9%)
Query: 56 LEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQ 115
LEASTNQEL + PLF+LP KILC+VV LLAEQ++DEVYAQITL PE +Q P + +
Sbjct: 3 LEASTNQELNQKLPLFNLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPSTFEP 62
Query: 116 CLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHG 175
L E K VHSFCK+LTASDTSTHGGFSVLRKHATECLPPLDMT TPTQEL AKDLHG
Sbjct: 63 PLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHG 122
Query: 176 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSS 235
YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD+FVFLRGENGELRVGVRRLA QQSS
Sbjct: 123 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSS 182
Query: 236 MPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMR 295
MPSSVISS SMHLGVLATA+HAV T T F+VYYKPR SQFI+ L+KY+EA+++ F VGMR
Sbjct: 183 MPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQFIVSLSKYMEAMNNKFMVGMR 242
Query: 296 FKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
FKMRFEGE+SPERRF+GTIVGV D S WP S+WRSL++QWDE A++QRP+RVSPWEIEP
Sbjct: 243 FKMRFEGEESPERRFSGTIVGVDDMSPHWPNSEWRSLRVQWDELASIQRPDRVSPWEIEP 302
Query: 356 FVASAPLNLAQPAVKSKRPR-SIDIP----ASASAFWYQGSTQSHDITQV-VGATEGQSS 409
FVA P +VK+KRPR ++IP ++ + + GST D TQ+ V A E +
Sbjct: 303 FVAPTPSIPHSISVKNKRPRPPLEIPDSDNSTVTTLRHPGSTSHDDRTQLSVSAAELKRF 362
Query: 410 ESQVVRPMRQKEIDSTIINNNST--------------------------DDHR------- 436
E+ +Q + N NS DD +
Sbjct: 363 ENHATWHYKQTDAGG---NGNSVSRTAMEGSWLASSSGCVSQHRLQDLIDDRKSGSVWST 419
Query: 437 IVAAQSVLSGYASSGRPGNTV---IHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGR 493
+ Q + R NT + + E+GKK+EAS C LFGI+L ++S + R
Sbjct: 420 VFPGQLAAHSTCPTPRSSNTKSDQVQDLGEKGKKAEASPSCRLFGIELINHSKSPVLTER 479
Query: 494 KVVDPTTGTSGVKGSARAASDFDASQNQDL----KEVKRGMADVSRKETQNKQGSAASTR 549
P + + + +A QN +L KE K G+ V KE Q+KQ S+ S+R
Sbjct: 480 AADQPNSTPNEIT---------EAEQNSNLPKISKERKLGLLQVPPKEIQHKQNSSTSSR 530
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMML 609
+RTKVQMQG+AVGRAVDLT L+GY L DELEKMF+I+G+LRPR+KW +VFTDDEGDMML
Sbjct: 531 SRTKVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELRPRNKWEIVFTDDEGDMML 590
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDS 658
GD W EFC MV++I+I+S+++VK M + SK S++E EGT I+ +S
Sbjct: 591 MGDYPWQEFCNMVRRIYIWSSQDVK-MGSVSKLAMSALECEGTVITSES 638
>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
Length = 671
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/672 (53%), Positives = 450/672 (66%), Gaps = 56/672 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV +PR GERVYYFPQGH+EQLEAS +Q L Q P FDLPSKILC+VV
Sbjct: 15 LYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEPQMPSFDLPSKILCKVV 74
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
+++ AE ETDEVYAQITL P+ DQ+E SPD LPEP + TVHSFCK LTASDTSTHGG
Sbjct: 75 NVQRKAEPETDEVYAQITLLPDPDQSEVTSPDTPLPEPERCTVHSFCKTLTASDTSTHGG 134
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA +CLPPLDM+ P QEL A DLHG +W F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 135 FSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVS 194
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGDAF+FLRGENGELRVGVRRL QQ++MPSSVISSQSMHLGVLATA+HA+ T T
Sbjct: 195 SKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATASHAIATGT 254
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD- 319
LF V+YKPRT S+FI+ +NKYLEA H SVGMRFKMRFEGE+ PERRF+GTIVGVGD
Sbjct: 255 LFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDN 314
Query: 320 FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDI 379
S W S+WRSLK+QWDEP+++ RP+RVS WE+EP VA+ P N +QP ++KR R +
Sbjct: 315 VSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVATTPSN-SQPVQRNKRARPSVL 373
Query: 380 PASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTD---DHR 436
P++ DI+ +G + Q+ + Q+ D +N ST ++
Sbjct: 374 PSTP------------DISS-LGMWKPQTESTAFSYGDFQRGRDLYPSHNFSTSAKTNYL 420
Query: 437 IVAAQSVLSGYASSG--RPGNT-------VIHEEVERGKKSEAS-LGCWLFGIDLKHNSN 486
+ S LSG + + RP V + + G++ + S G LFGI L NSN
Sbjct: 421 GFSGNSPLSGVSPNSLYRPNRVESVTDSFVPVIDKDSGERRQGSGNGYRLFGIQLVGNSN 480
Query: 487 TAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV------------- 533
P TSG+ G R FDA +Q + +++
Sbjct: 481 AEE------TSPLITTSGMVGDDRPVVSFDAESDQHSEPSNINRSEIPSISCEPEKSCLR 534
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP- 592
S +E Q++Q R+ TKV MQGIAVGRAVDLT + Y+DL +LE+MF+I+G+L
Sbjct: 535 SPQELQSRQ-----IRSCTKVHMQGIAVGRAVDLTRFECYEDLLRKLEEMFDIEGELSGF 589
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK-PIASSVEGEG 651
KW VV+TDDE DMM+ GDD W EFC MV+KIFIY++EEVK ++ SK P+ ++
Sbjct: 590 SKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLSPKSKLPVNEEIKAAK 649
Query: 652 TAISLDSELKSE 663
+D+ + E
Sbjct: 650 ADDDVDTTVNME 661
>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/681 (53%), Positives = 446/681 (65%), Gaps = 47/681 (6%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA+ N + G + LY+ELW ACAGPLV +PR GE VYYFPQGH+EQLEAS
Sbjct: 1 MAFAAMNHTSGGNPHAGGCNDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASM 60
Query: 61 NQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP 120
+Q + Q PLF+LPSKILC+VV+++ AE ETDEVYAQITL PE DQ+E SPD LPEP
Sbjct: 61 HQGMEPQMPLFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEP 120
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
+ TVHSFCK LTASDTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLHG EW F
Sbjct: 121 ERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHF 180
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV 240
+HIFRGQPRRHLLTTGWS FV+SK+LVAGDAF+FLRGENGELRVGVRRL QQ++MPSSV
Sbjct: 181 RHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSV 240
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKM 298
ISSQSMHLGVLATA+HA+ T TLF V+YKPRT S+FI+ LNKYLE +H SVGMRFKM
Sbjct: 241 ISSQSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLEVRNHKLSVGMRFKM 300
Query: 299 RFEGEDSPERRFTGTIVGVGD-FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
RFEGE+ PERRF+GTIVGVGD S W S WRSLK+QWDEP+++ RPERVS WE+EP V
Sbjct: 301 RFEGEEVPERRFSGTIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLV 360
Query: 358 ASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRP- 416
A+ P N +QP ++KR R IP+ + G +S + + + Q P
Sbjct: 361 ATTPSN-SQPVQRNKRARPYVIPSPTADLSALGMWKSPVESSALSYGDSQRGRDLYSSPN 419
Query: 417 -MRQKEIDSTIINNNS-------TDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKS 468
+++S NS H +SV +A V + ER +
Sbjct: 420 FSTTAKVNSLGFRGNSQVASVSHNSMHWPNRVESVTDSFAP------VVNKDSGER--RQ 471
Query: 469 EASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASD-----FDASQNQDL 523
+G LFGI L NSNT GTS V S +D +A +Q
Sbjct: 472 GTGIGYKLFGIQLVENSNTE------------GTSPVVVSGTVVNDLPVLSLEAESDQHS 519
Query: 524 KEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKM 583
+ K + S +E Q++Q R+ TKV MQG+AVGRAVDLT K Y+DL +LE+M
Sbjct: 520 EPEKSCLR--SSQELQSRQ-----IRSCTKVHMQGVAVGRAVDLTQFKRYEDLLRKLEEM 572
Query: 584 FEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKP 642
F+I+G+L KW VV+TD+E DMM GDD W EFC MVKKIFIY++EEVK ++ K
Sbjct: 573 FDIEGELSGSTKKWQVVYTDNEDDMMKVGDDPWNEFCGMVKKIFIYTSEEVKRLSPKIKL 632
Query: 643 IASSVEGEGTAISLDSELKSE 663
+A E +G + D+ + +E
Sbjct: 633 LAEE-EVKGIGDNADAAVNTE 652
>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/669 (52%), Positives = 443/669 (66%), Gaps = 40/669 (5%)
Query: 13 SSQGGPGSGD----LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
+S G P G LY+ELW ACAGPLV +P GERVYYFPQGH+EQLEAS +Q + Q
Sbjct: 4 TSGGNPHPGGCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQQM 63
Query: 69 PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSF 128
P F+LPSKILC+VV+++ AE ETDEVYAQITL PE DQ+E SPD LPEP + TVHSF
Sbjct: 64 PSFNLPSKILCKVVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTVHSF 123
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLHG EW F+HIFRGQP
Sbjct: 124 CKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQP 183
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLLTTGWS FV+SK+LVAGDAF+FLRGENGELRVGVRRL QQ++MPSSVISSQSMHL
Sbjct: 184 RRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHL 243
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
GVLATA+HA+ T TLF V+YKPRT S+FI+ LNKY+EA +H SVGMRFKMRFEGE+ P
Sbjct: 244 GVLATASHAIATGTLFSVFYKPRTSRSEFIVNLNKYIEAQNHKLSVGMRFKMRFEGEEVP 303
Query: 307 ERRFTGTIVGVGD-FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
ERRF+GTIVGVGD S W S+WRSLK+ WDEP+++ RPERVSPW++EP VA+ P N +
Sbjct: 304 ERRFSGTIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVATTPSN-S 362
Query: 366 QPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI--- 422
QP ++KRPR +P+ + G + + E Q P
Sbjct: 363 QPMQRNKRPRPSVLPSPTANLSALGMWKPSVESSAFSYGESQRGRDPYPSPNFSTTAKAN 422
Query: 423 ------DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWL 476
+S + + + +R +SV +A V+++++ ++ +G L
Sbjct: 423 SLSFCGNSQVTSVSPNSMYRPNQVESVTDSFAP-------VVNKDLGE-RRQGTGIGYRL 474
Query: 477 FGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRK 536
FGI L N N P SG G+ R +A +Q + K + S +
Sbjct: 475 FGIQLIDNFNAEG------TSPVVTVSGTVGNDRPVVSLEAESDQHSEPEKSCLR--SHQ 526
Query: 537 ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK 595
E Q++Q R+ TKV MQG+AVGRAVDLT + Y+DL +LE+MF+I+G+L K
Sbjct: 527 ELQSRQ-----IRSCTKVHMQGVAVGRAVDLTQFERYEDLLRKLEEMFDIEGELSGSTKK 581
Query: 596 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIAS-SVEGEGTAI 654
W VV+TD+E DMM GDD W EFC MVKKIFIY++EEVK ++ K ++G+
Sbjct: 582 WQVVYTDNEDDMMKVGDDPWHEFCSMVKKIFIYASEEVKRLSPKIKLSGDEEIKGDSANA 641
Query: 655 SLDSELKSE 663
+ D+ + +E
Sbjct: 642 NADASVNTE 650
>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
Length = 739
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/682 (53%), Positives = 447/682 (65%), Gaps = 60/682 (8%)
Query: 10 CSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP 69
C + G S LYRELW ACAGPLV +PR ERVYYFPQGH+EQLEAS +Q L Q P
Sbjct: 71 CPTPAPLGLSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMP 130
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFC 129
F+LPSKILC+VV++ L AE +TDEVYAQITL PE++Q E SPD LPEP + VHSFC
Sbjct: 131 SFNLPSKILCKVVNVVLRAESDTDEVYAQITLLPESNQNEVTSPDPPLPEPTRCNVHSFC 190
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLHG +W F+HIFRGQPR
Sbjct: 191 KTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPR 250
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV+SK+LVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS SMHLG
Sbjct: 251 RHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLG 310
Query: 250 VLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
VLATA+HA+ T TLF V+YKPRTS+ F++ LNKYLEA +H SVGMRFKMRFEGE+ PE
Sbjct: 311 VLATASHAISTGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPE 370
Query: 308 RRFTGTIVGVGD-FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
R F+GTIVG+GD S W S+WRSLK+QWDEP+++ RP++VS WE+EP VAS PL+ Q
Sbjct: 371 RSFSGTIVGLGDNASPGWANSEWRSLKVQWDEPSSILRPDKVSAWELEPLVASNPLS-TQ 429
Query: 367 PAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVG-ATEGQSSESQVVRPMRQKEIDST 425
P ++KRPR +P+S S D T + G +SS P R +++ S+
Sbjct: 430 PTQRNKRPRPTVLPSS-----------SPDATVLGGWKPTVESSTFSYAEPQRGRDLYSS 478
Query: 426 IINNNSTDDHRIVAAQSVLSGYASSGRPGNT-------------VIHEEVERGKKSEASL 472
+ + + A S L +S+ NT E VE KK +
Sbjct: 479 PKFSTAASNSLGFNANSSLGAVSSNNYWCNTNRVENIMDPSSHGANREPVE--KKQNSRN 536
Query: 473 GCWLFGIDLKHNSNT--AAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRG- 529
GC LFGI L NSN A+P+ +T G + D D Q+ + + R
Sbjct: 537 GCRLFGIQLLGNSNVDEASPV-------STPKMGGEDRLVPPIDTDFEQHSEPSNIHRSD 589
Query: 530 ------MAD----VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDE 579
AD +S E+Q++Q R+ TKV MQGIAVGRAVDLT YDDL +
Sbjct: 590 IPSISCDADKSCLISPLESQSRQ-----IRSCTKVHMQGIAVGRAVDLTRFNQYDDLLRK 644
Query: 580 LEKMFEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
LE+MF+I+G+L KW VV+TDDE DMML GDD W EFC MV+KIFIY+TEEVK +
Sbjct: 645 LEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEVKRL-- 702
Query: 639 SSKPIASSVEGEGTAISLDSEL 660
S I + GE DS++
Sbjct: 703 -SPKIKLPLGGEAKLSKPDSDI 723
>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
Length = 559
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/616 (57%), Positives = 420/616 (68%), Gaps = 63/616 (10%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA V+ +F + G LY ELWKACAGPLVEVPR GERV+YFPQGH+EQL A T
Sbjct: 1 MANVDVDF-----RRSGSYDDQLYMELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALT 55
Query: 61 NQELTHQE-PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE 119
NQ + QE P F+LP KILCRV+ + L AE ETDEVYAQITL PE DQ+EP S D L E
Sbjct: 56 NQGVVDQEIPDFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE 115
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
P KQ+V SF KILTASDTSTHGGFSVLRKHATECLP LDM T TQEL A+DLHGYEWR
Sbjct: 116 PAKQSVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWR 175
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG+ G+LRVGVRRLA QQS+MP+S
Sbjct: 176 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLARQQSTMPAS 235
Query: 240 VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMR 299
VISSQSMHLGVLATA+HAV T TLF+V+YKPR SQFIIG+NKY+ A+ F +GMRF+MR
Sbjct: 236 VISSQSMHLGVLATASHAVNTKTLFVVFYKPRISQFIIGVNKYMAAMKIGFPIGMRFRMR 295
Query: 300 FEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
FEGE+SPER FTGTIVG GD S QWP SKWRSL+IQWDEP+TVQRP +VS WEIEPF S
Sbjct: 296 FEGEESPERIFTGTIVGTGDLSSQWPASKWRSLQIQWDEPSTVQRPNKVSTWEIEPFSPS 355
Query: 360 APL-NLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMR 418
QP KSKR R P ++S+ S S I ++ G+
Sbjct: 356 VLTPTPTQPQSKSKRSR----PINSSSVSVIRSRVSSCIAEITGS--------------- 396
Query: 419 QKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLG--CWL 476
I ST ++ +S R++ S+ R N + + KK+E + C L
Sbjct: 397 --PIASTFLSLDSNSSLRLLFQD------PSTERNSNKPVFPSGLQCKKTETPVTSCCRL 448
Query: 477 FGIDLKHNSNTAAPL--GRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVS 534
FG DL + AP+ + ++ + SG +++ QD +
Sbjct: 449 FGFDLMSKPASTAPVPPDKLLISVDSNNSG------------SAKCQDPNSL-------- 488
Query: 535 RKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRD 594
T+ KQ + STR+RTKVQ QG AVGRAVDLT L+ YD+L +ELEKMFEI G+L P+D
Sbjct: 489 ---TEQKQQT--STRSRTKVQKQGTAVGRAVDLTLLRSYDELINELEKMFEIDGELSPKD 543
Query: 595 KWAVVFTDDEGDMMLA 610
KWA+VFTDDEGDMML
Sbjct: 544 KWAIVFTDDEGDMMLV 559
>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/669 (53%), Positives = 442/669 (66%), Gaps = 44/669 (6%)
Query: 14 SQGGPGSGD--LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
+ PG+ + LY+ELW ACAGPLV +PR GERVYYFPQGH+EQLEAS NQ L Q P F
Sbjct: 2 ASAAPGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF 61
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
+LPSKILC+VV++ L AE ETDEVYAQITL PE DQ+E SPD LPE P+ TVHSFCK
Sbjct: 62 NLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKT 121
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSVLR+HA +CLPPLDMT P QEL A DLHG EW F+HIFRGQPRRH
Sbjct: 122 LTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRH 181
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV+SK+LVAGDAF+FLRGENGELRVGVRRL QQS+MPSSVISS SMHLGVL
Sbjct: 182 LLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVL 241
Query: 252 ATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
ATA+HA+ T TLF V+YKPRTS +FI+ +NKYLEA H SVGMRFKMRFEG++ PERR
Sbjct: 242 ATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERR 301
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
F+GTIVGVGD S W S+WRSLK+QWDEP+++ RP+RVSPWE+EP V++ P N QP+
Sbjct: 302 FSGTIVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPTN-PQPS 360
Query: 369 VKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIIN 428
++KR R +P++ QG +S + + Q V P +ST
Sbjct: 361 QRNKRSRPPILPSTMPDSSLQGVWKSPVESAPFSYCDHQHGRD--VYP--STNFNSTATG 416
Query: 429 NNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEV---ERGKKSEASL-GCWLFGIDLKHN 484
+ + +S+ Y SS +T V E G+K + + GC LF I L N
Sbjct: 417 FLGFGGNCYASNKSI---YWSSRMENSTESFSPVALKEFGEKRQGTANGCRLFRIQLHDN 473
Query: 485 SNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV----------- 533
SN+ + P SG G DA +Q + +D+
Sbjct: 474 SNS-----NEESLPMVTLSGRMGDDGPLPSLDAESDQHSEPSNVNRSDIPSVSCDAEKSC 528
Query: 534 --SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL- 590
S +E+Q++Q R+ TKV MQG+AVGRAVDLT GY+DL +LE+MF+I G+L
Sbjct: 529 LRSPQESQSRQ-----IRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDITGELC 583
Query: 591 RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
KW VV+TD+E DMM+ GDD W EFC +V+KIFIY+ EEV+ + S I + E
Sbjct: 584 GSTKKWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVRKL---SPKIGLPISEE 640
Query: 651 GTAISLDSE 659
+DSE
Sbjct: 641 VKPSKMDSE 649
>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
Group]
gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
Length = 678
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/644 (54%), Positives = 426/644 (66%), Gaps = 50/644 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR GE VYYFPQGH+EQLEAST+Q+L PLF+LPSKILC+VV
Sbjct: 23 LYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVV 82
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
++EL AE ++DEVYAQI L PE DQ E SP EP K VHSFCK LTASDTSTHGG
Sbjct: 83 NVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTHGG 142
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA ECLPPLDMT P QEL A+DLHG EW F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 143 FSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 202
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SKRLVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS SMHLGVLATA+HA+ T T
Sbjct: 203 SKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGT 262
Query: 263 LFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
LF V+YKPRTSQ F++ NKYLEA + SVGMRFKMRFEG+++PERRF+GTI+GVG
Sbjct: 263 LFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVGSM 322
Query: 321 SEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDI 379
S W S WRSLK+QWDEP+ V RP+RVSPWE+EP S QP ++KR R
Sbjct: 323 STSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARP--- 379
Query: 380 PASASAFWYQGSTQSHDITQVVG-------ATEGQS----SESQVVRPMRQKEIDSTIIN 428
PAS S + ++ V G +T+G S +Q + P I ST +N
Sbjct: 380 PASNSI--------APELPPVFGLWKSSAESTQGFSFSGLQRTQELYPSSPNPIFSTSLN 431
Query: 429 NNSTDDHRIVAAQSVLSGYASSGRPGNTV---IHEEVERGKKSEASLGCWLFGIDLKHNS 485
+ + A + + N+ I + K+ +S GC LFGI++
Sbjct: 432 VGFSTKNEPSALSNKHFYWPMRETRANSYSASISKVPSEKKQEPSSAGCRLFGIEISSAV 491
Query: 486 NTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQ-------DLKEVKRGMADVSRKET 538
+PL SGV G + A+ DA +Q + + ++ S ET
Sbjct: 492 EATSPLA--------AVSGV-GQDQPAASVDAESDQLSQPSHANKSDAPAASSEPSPHET 542
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR-DKWA 597
Q++Q R+ TKV MQG+AVGRAVDLT L GYDDL +LE+MF+IQG+L KW
Sbjct: 543 QSRQ-----VRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKKWK 597
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
VV+TDDE DMML GDD WPEFC MVK+I+IY+ EE K + SK
Sbjct: 598 VVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPKSK 641
>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
Length = 678
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/651 (54%), Positives = 429/651 (65%), Gaps = 64/651 (9%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR GE VYYFPQGH+EQLEAST+Q+L PLF+LPSKILC+VV
Sbjct: 23 LYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVV 82
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
++EL AE ++DEVYAQI L PE DQ E SP EP K VHSFCK LTASDTSTHGG
Sbjct: 83 NVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTHGG 142
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA ECLPPLDMT P QEL A+DLHG EW F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 143 FSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 202
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SKRLVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS SMHLGVLATA+HA+ T T
Sbjct: 203 SKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGT 262
Query: 263 LFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
LF V+YKPRTSQ F++ NKYLEA + SVGMRFKMRFEG+++PERRF+GTI+GVG
Sbjct: 263 LFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVGSM 322
Query: 321 SEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDI 379
S W S WRSLK+QWDEP+ V RP+RVSPWE+EP S QP ++KR R
Sbjct: 323 STSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARP--- 379
Query: 380 PASASAFWYQGSTQSHDITQVVG-------ATEGQS----SESQVVRPMRQKEIDSTIIN 428
PAS+S + ++ V G +T+G S +Q + P I ST +N
Sbjct: 380 PASSSI--------APELPPVFGLWKSSAESTQGFSFSGLQRTQELYPSSPNPIFSTSLN 431
Query: 429 NNSTDDHRIVAA----------QSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFG 478
+ + A ++ Y++S I + K+ +S GC LFG
Sbjct: 432 VGFSTKNEPSALSNKHFYWPMRETRADSYSAS-------ISKVPSEKKQEPSSAGCRLFG 484
Query: 479 IDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQ-------DLKEVKRGMA 531
I++ +PL SGV G + A+ DA +Q + + +
Sbjct: 485 IEISSAVEATSPLA--------AVSGV-GQDQLAASVDAESDQLSQPSHANKSDAPAASS 535
Query: 532 DVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR 591
+ S ETQ++Q R+ TKV MQG+AVGRAVDLT L GYDDL +LE+MF+IQG+L
Sbjct: 536 EPSPHETQSRQ-----VRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELS 590
Query: 592 PR-DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
KW VV+TDDE DMML GDD WPEFC MVK+I+IY+ EE K + SK
Sbjct: 591 ASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPKSK 641
>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 674
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/655 (53%), Positives = 436/655 (66%), Gaps = 62/655 (9%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G + DLY+ELW ACAGPLV +PR GERVYYFPQGH+EQLEAS + L Q P F+LPSK
Sbjct: 13 GAINDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLEQQMPSFNLPSK 72
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
ILC+VV++ L AE ETDEVYAQITL PE DQ+E SPD LPE P+ +HSFCK LTASD
Sbjct: 73 ILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRVKIHSFCKTLTASD 132
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLHG EW F+HIFRGQP+RHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTG 192
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV+SK+L AGDAF+FLRGENGELRVGVRR+ QQS++PSSVISS SMHLGVLATA+H
Sbjct: 193 WSVFVSSKKLAAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSHSMHLGVLATASH 252
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
A+ T TLF V+YKPRT S+FI+ +NKYLE H SVGMRFKMRFEG++ PERRF+GTI
Sbjct: 253 AIATGTLFSVFYKPRTSRSEFIVSVNKYLEVQSHKLSVGMRFKMRFEGDEIPERRFSGTI 312
Query: 315 VGVGD--FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
VGVGD S WP S+WRSLK+QWDEP+++ RP+RVS WE+EP V++ N +QP ++K
Sbjct: 313 VGVGDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTTLAN-SQPTQRNK 371
Query: 373 RPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNST 432
R R + +P++ QG +S V +T + Q R + S N+++T
Sbjct: 372 RARPLILPSTMPDSSLQGIWKSS-----VESTSFSYCDPQQGRGL----YPSPKFNSSAT 422
Query: 433 DDHRIVAAQSVLSGYASSGRPGNTVIH---------EEV------ERGKKSEAS-LGCWL 476
+ + SG +S G P N I+ E + E G+K + + GC L
Sbjct: 423 N---FIG----FSGNSSVGSPSNKSIYWSNRMENNLESISAIALKEAGEKRQGTGNGCRL 475
Query: 477 FGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV--- 533
FGI L NSN L T SG G R+ DA +Q + +D+
Sbjct: 476 FGIQLLENSNAEGNLQ------TVTLSGRVGDDRSVPSLDAESDQHSEPSNANRSDIPSV 529
Query: 534 ----------SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKM 583
S +E+Q+KQ R+ TKV MQG+AVGRAVDLT GY+DL +LE M
Sbjct: 530 SCDAEKSCLQSPQESQSKQ-----IRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEDM 584
Query: 584 FEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
F I+ +L KW VV+TD+E DMM+ GDD W EFC +V+KIFIY+ EEVK ++
Sbjct: 585 FNIKTELCGSLKKWQVVYTDNEDDMMMVGDDPWDEFCSVVRKIFIYTAEEVKKLS 639
>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
Length = 640
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/647 (54%), Positives = 426/647 (65%), Gaps = 52/647 (8%)
Query: 7 NFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTH 66
+ S SS G + LY+ELW ACAGPLV VPR ERVYYFPQGH+EQLEAS +Q L
Sbjct: 3 SLNSSYSSLVGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQ 62
Query: 67 QEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH 126
+ P F+LPSKILC+VV++ L AE ETDEVYAQ+TL PE DQ+E SPD LPEP TVH
Sbjct: 63 KMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVH 122
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SFCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EW F+HIFRG
Sbjct: 123 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWS FV+SKRL AGDAF+FLRGENGELRVGVRRL Q +++P SVISS SM
Sbjct: 183 QPRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSM 242
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
HLGVLATA+HA+ T TLF V+YKP S+FI+ +NKYLEA +H SVGMRFKMRFEG+++P
Sbjct: 243 HLGVLATASHAITTGTLFSVFYKPSPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAP 302
Query: 307 ERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
ERRF+GTIVGVGD S W S+WRSLK+QWDEP+++ RPERVSPWE+EP V PL A
Sbjct: 303 ERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLT-A 361
Query: 366 QPAVKSKRPRSIDIPASA---SAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
QP +SKRPRS + + SAF + T SH T
Sbjct: 362 QPMQRSKRPRSPVLSSPTPGLSAFAVK--TNSHSFT---------------------VNY 398
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
ST ++NNS + ++ V + T + + KK E G LFGI L
Sbjct: 399 SSTAVSNNSA--YWPQQSEPVPELF--------TPVPNKEYGKKKPENGNGYRLFGIQLV 448
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDA-----SQNQDLKEVKRGM--ADVSR 535
NSN L P T S G + DA SQ ++ + K +D +
Sbjct: 449 DNSNVEETL------PVTTISSGAGEDQPVVCLDADSDHQSQRSNINQSKTPTVGSDPEK 502
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRD 594
+ + R+ TKV MQG+AVGRAVDLT Y +L +LE+MF+I+G+L P
Sbjct: 503 SCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTK 562
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
KW VV+TDDE DMM+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 563 KWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELSPKAK 609
>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/670 (53%), Positives = 439/670 (65%), Gaps = 46/670 (6%)
Query: 14 SQGGPGSGD--LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
+ PG+ + LY+ELW ACAGPLV +PR GERVYYFPQGH+EQLEAS NQ L Q P F
Sbjct: 2 ASAAPGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF 61
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
+LPSKILC+VV++ L AE ETDEVYAQITL PE DQ+E SPD LPE P+ TVHSFCK
Sbjct: 62 NLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKT 121
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSVLR+HA +CLPPLDMT P QEL A DLHG EW F+HIFRGQPRRH
Sbjct: 122 LTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRH 181
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV+SK+LVAGDAF+FLRGENGELRVGVRRL Q S+MPSSVISS SMHLGVL
Sbjct: 182 LLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVISSHSMHLGVL 241
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
ATA+HA+ T TLF V+YKPRT S+FI+ +NKYLEA H SVGMRFKMRFEG++ PERR
Sbjct: 242 ATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERR 301
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
F+GTIVGV D S W S+WRSLK+QWDEP+++ RP+RVSPWE+EP V++ P N +QP+
Sbjct: 302 FSGTIVGVEDNKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSNPPTN-SQPS 360
Query: 369 VKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTI-- 426
++KR R +P++ QG +S + + Q V P +ST
Sbjct: 361 QRNKRSRPPILPSTMLDSSLQGVWKSPVESAPFSYRDHQHGRD--VYP--STNFNSTATG 416
Query: 427 ---INNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKH 483
N + ++ + S + S P + E E K+ + GC LFGI L
Sbjct: 417 FLGFGGNCSASNKSIYWSSRIENSTESFSP--VAVKEFGE--KRQGTANGCRLFGIQLHD 472
Query: 484 NSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV---------- 533
NSN+ + P SG G DA +Q + +D
Sbjct: 473 NSNS-----NEESLPMVSLSGRVGDDGLLPSLDAESDQHSEPSNVNRSDFPSVSCDAEKS 527
Query: 534 ---SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
S +E+Q++Q R+ TKV MQG+AVGRAVDLT GY+DL +LE+MF+I G+L
Sbjct: 528 CLRSPQESQSRQ-----IRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDINGEL 582
Query: 591 RPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEG 649
K W VV+TD+E DMM+ GDD W EFC +V+KIFIY+ EEVK + S I +
Sbjct: 583 CGSTKEWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVKKL---SPKIGLPISE 639
Query: 650 EGTAISLDSE 659
E +DSE
Sbjct: 640 EVKPCKMDSE 649
>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
Length = 672
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/668 (51%), Positives = 440/668 (65%), Gaps = 44/668 (6%)
Query: 17 GPGS-GD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
GPGS GD L+RELW ACAGPLV VPR GE VYYFPQGH+EQLEAST+Q+L PLF+LP
Sbjct: 9 GPGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLP 68
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTA 134
KILC+VV++EL AE ++DEVYAQI L PE +Q EP SPD PEP + VHSFCK LTA
Sbjct: 69 PKILCKVVNVELRAETDSDEVYAQIMLQPEAEQNEPTSPDAEPPEPERCNVHSFCKTLTA 128
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSVLR+HA ECLP LDMT P QEL AKDLHG EW F+HIFRGQPRRHLLT
Sbjct: 129 SDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLT 188
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS FV+SKRLVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS SMHLGVLATA
Sbjct: 189 TGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATA 248
Query: 255 AHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
+HA+ T TLF V+YKPRTS +F++ +NKYLEA +H SVGMRFKMRFEG++SPERRF+G
Sbjct: 249 SHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSG 308
Query: 313 TIVGVGDF----SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
TI+G+G + W S+WRSLK+QWDEP+ + RP+RVSPWE+EP A+ P QP
Sbjct: 309 TIIGLGSMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPLDATNP-QPPQPP 367
Query: 369 VKSKRPRSIDIPASAS------AFWYQGSTQSHDI-------TQVVGATEGQSSESQVVR 415
+++KR R P+ A FW + + TQ + + S S +
Sbjct: 368 LRNKRARPPASPSIAPELPPVFGFWKSPAEPAQAFSFSGLQRTQELYHSNPNSIFSSSLN 427
Query: 416 PMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCW 475
+ + + NNN ++ Y++S I++ K+ A+ GC
Sbjct: 428 VGFNSKNERSTPNNNHL---YWTMRETRTESYSAS-------INKAPTEKKQESATSGCR 477
Query: 476 LFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSR 535
LFGI++ + +P+ T + G + D ++ Q + A +
Sbjct: 478 LFGIEI---GSAVSPVV------TVASVGQDPPPALSVDVESDQLSQPSHANKTDAPAAS 528
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR-D 594
E + + R+ TKV MQG+AVGRAVDLT L GYDDL +LE+MF+I G+L
Sbjct: 529 SERSPNETESRQVRSCTKVIMQGMAVGRAVDLTRLDGYDDLHRKLEEMFDIHGELSANLR 588
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK--PIASSVEGEGT 652
KW VV+TDDE DMML GDD W EFC+MVK+I+IYS EE K++ +K I +++ +
Sbjct: 589 KWKVVYTDDEDDMMLVGDDPWNEFCRMVKRIYIYSYEEAKSLTPKAKLPVIGDTIKPDPN 648
Query: 653 AISLDSEL 660
+S +S++
Sbjct: 649 KLSPESDM 656
>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/657 (55%), Positives = 435/657 (66%), Gaps = 27/657 (4%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGD----LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQL 56
MA V N+ GGP +G LY+ELW ACAGPLV VPR GERVYYFPQGH+EQL
Sbjct: 1 MALVASNY-----PSGGPHAGAPCDALYKELWHACAGPLVTVPREGERVYYFPQGHMEQL 55
Query: 57 EAST-NQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQ 115
EAST +Q L Q P F+LPSKILC+VVH++L AE ETDEVYAQ+TL PE DQ+E SPD
Sbjct: 56 EASTTHQGLDQQMPSFNLPSKILCKVVHVQLRAEPETDEVYAQVTLLPEPDQSEITSPDP 115
Query: 116 CLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHG 175
LPEP + TVHSFCK LTASDTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLHG
Sbjct: 116 PLPEPQRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHG 175
Query: 176 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSS 235
EW F+HIFRGQPRRHLLTTGWS FV+SK+LVAGDAF+FLRGENGELRVGVRRL Q S+
Sbjct: 176 NEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSN 235
Query: 236 MPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVG 293
MPSSVISS SMHLGVLATA+HA+ T TLF V+YKPRT S+FI+ LNKYLEA +H SVG
Sbjct: 236 MPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSLNKYLEARNHKLSVG 295
Query: 294 MRFKMRFEGEDSPERRFTGTIVGVGD--FSEQWPGSKWRSLKIQWDEPATVQRPERVSPW 351
MRFKMRFEGE+ PERRF+GTIVGVGD S W S+WRSLK+QWDEPA++ RPERVS W
Sbjct: 296 MRFKMRFEGEEVPERRFSGTIVGVGDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAW 355
Query: 352 EIEPFV-ASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
E+EP V A+AP NL QPA ++KR R +P++ G +S + G
Sbjct: 356 ELEPLVAAAAPTNL-QPAQRNKRARPPVLPSATPDLSVLGMWKS-SVESPSGFPYCDPHR 413
Query: 411 SQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNT-----VIHEEVERG 465
+ + P K T N+ S + AA S S Y S+ T +++E
Sbjct: 414 GRDLYP-SPKFSSITKTNSFSFSGNSSPAAVSSNSMYWSNRMETATESFAPAVNKESGEK 472
Query: 466 KKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKE 525
++ S GC LFG L NS L V + + S+ D+
Sbjct: 473 RRDTGS-GCRLFGFQLLDNSTLEETLPVLTVGEDQPVPSLDVESDQHSEPSNINRSDIPS 531
Query: 526 VKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
V +S + Q Q + R+ TKV MQGIAVGRAVDLT Y+DL +LE+MF+
Sbjct: 532 VSCEPDKLSLRSPQESQ--SRQIRSCTKVHMQGIAVGRAVDLTRFDRYEDLLKKLEEMFD 589
Query: 586 IQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
IQG+L W VV+TDDE DMM+ GDD W EFC MV+KIFIY+ EEVK ++ K
Sbjct: 590 IQGELCGLTSIWQVVYTDDEDDMMMVGDDPWLEFCSMVRKIFIYTAEEVKRLSPKIK 646
>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
Length = 645
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/633 (55%), Positives = 421/633 (66%), Gaps = 54/633 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV VPR ERVYYFPQGH+EQLEAS +Q L + P F+LPSKILC+VV
Sbjct: 22 LYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILCKVV 81
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
++ L AE ETDEVYAQ+TL PE DQ+E SPD LPEP TVHSFCK LTASDTSTHGG
Sbjct: 82 NVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTSTHGG 141
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA ECLPPLDM+ P QEL AKDLHG EW F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 142 FSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 201
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SKRL AGDAF+FLRGENGELRVGVRRL Q +++P SVISS SMHLGVLATA+HA+ T T
Sbjct: 202 SKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAITTGT 261
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
LF V+YKPR S+FI+ +NKYLEA +H SVGMRFKMRFEG+++PERRF+GTIVGVGD
Sbjct: 262 LFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIVGVGDT 321
Query: 321 -SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDI 379
S W S+WRSLK+QWDEP+++ RPERVSPWE+EP V PL AQP +SKRPRS +
Sbjct: 322 GSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLT-AQPMQRSKRPRSPVL 380
Query: 380 PASA---SAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHR 436
+ SAF + T SH T ST ++NNS +
Sbjct: 381 SSPTPGLSAFAVK--TNSHSFT---------------------VNYSSTAVSNNSA--YW 415
Query: 437 IVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVV 496
++ V + T + + KK E G LFGI L NSN L
Sbjct: 416 PQQSEPVPELF--------TPVPNKEYGKKKPENGNGYRLFGIQLVDNSNVEETL----- 462
Query: 497 DPTTGTSGVKGSARAASDFDA-----SQNQDLKEVKRGM--ADVSRKETQNKQGSAASTR 549
P T S G + DA SQ ++ + K +D + + + R
Sbjct: 463 -PVTTISSGAGEDQPVVCLDADSDHQSQRSNINQSKTPTVGSDPEKSCLGSSLLQSRQIR 521
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDDEGDMM 608
+ TKV MQG+AVGRAVDLT Y +L +LE+MF+I+G+L P KW VV+TDDE DMM
Sbjct: 522 SCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMM 581
Query: 609 LAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 582 MVGDDPWHEFCSMVRKIFIYTVEEVKELSPKAK 614
>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
Length = 684
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/644 (57%), Positives = 437/644 (67%), Gaps = 43/644 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV VPR GERVYYFPQGH+EQLEASTNQ Q PLF LP+KILCRVV
Sbjct: 22 LYQELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQQMPLFSLPAKILCRVV 81
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
H++L AE ETDEVYAQITL PE +Q E SPD +PEPP+ TVHSFCK LTASDTSTHGG
Sbjct: 82 HVQLRAEPETDEVYAQITLLPEPEQGEITSPDPPIPEPPRCTVHSFCKTLTASDTSTHGG 141
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA ECLP LDM+ P QEL A DLHG EW F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 142 FSVLRRHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 201
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SKRLVAGDAF+FLRGENGELRVGVRRL Q S+MPSSVISS SMHLGVLATA+HA+ T T
Sbjct: 202 SKRLVAGDAFIFLRGENGELRVGVRRLMRQPSNMPSSVISSHSMHLGVLATASHAISTGT 261
Query: 263 LFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD- 319
LF V+YKPRTSQ FII LNKYLEA +H SVGMRFKMRFEGED+PERRF+GTI+GVGD
Sbjct: 262 LFSVFYKPRTSQSEFIISLNKYLEAKNHKLSVGMRFKMRFEGEDAPERRFSGTIIGVGDA 321
Query: 320 FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR------ 373
S +W S+WRSLK+QWDEP+++ RP RVSPWE+EP VA+ P + QP +SKR
Sbjct: 322 VSSRWADSEWRSLKVQWDEPSSIPRPVRVSPWELEPLVAAVP-SAPQPTPRSKRARPPAL 380
Query: 374 -PRSIDIPASA--SAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNN 430
P + DIPA + + GS SH G S+ S V K N
Sbjct: 381 LPSTPDIPACSRWKSHIDAGSAFSHSSGLQRGLDLYSSANSPTVFANMTKIGSLPFSGTN 440
Query: 431 STDDHRIVAAQSVLSGYASSGRPGNTVI-HEEVERG-KKSEASLGCWLFGIDLKHNSNTA 488
++ + I S S A + P + + + + E G ++ E+ G LFGI L NS A
Sbjct: 441 ASCE--ISGNLSYWSNRAET--PAKSFMANSKRESGDRRPESGNGYRLFGIQLVDNSTMA 496
Query: 489 APLGRKVVDPTTGTSGVKGSARAASDFDASQNQ-------DLKEVKRGMAD----VSRKE 537
P SG G R+ + Q+Q DL V G D +S +E
Sbjct: 497 E------SSPAAAVSGGVGEDRSVPEDSDQQSQPSDIDRSDLPAVS-GKPDKYCLMSPQE 549
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKW 596
Q++Q TR+ TKV +QG+AVGRAVDL+ L Y+DL ++LE+MF I+G+L P KW
Sbjct: 550 MQSRQ-----TRSCTKVHLQGMAVGRAVDLSRLDCYEDLLNKLEQMFNIEGELSGPTKKW 604
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
+V+TDDE D ML GDD W EFC +V+KI IY+ EEVKN+ S
Sbjct: 605 QLVYTDDEDDTMLVGDDPWHEFCGIVRKINIYTPEEVKNLVPRS 648
>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
Length = 643
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/633 (55%), Positives = 421/633 (66%), Gaps = 54/633 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV VPR ERVYYFPQGH+EQLEAS +Q L + P F+LPSKILC+VV
Sbjct: 20 LYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFNLPSKILCKVV 79
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
++ L AE ETDEVYAQ+TL PE DQ+E SPD LPEP TVHSFCK LTASDTSTHGG
Sbjct: 80 NVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTSTHGG 139
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA ECLPPLDM+ P QEL AKDLHG EW F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 140 FSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 199
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SKRL AGDAF+FLRGENGELRVGVRRL Q +++P SVISS SMHLGVLATA+HA+ T T
Sbjct: 200 SKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAITTGT 259
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
LF V+YKPR S+FI+ +NKYLEA +H SVGMRFKMRFEG+++PERRF+GTIVGVGD
Sbjct: 260 LFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIVGVGDT 319
Query: 321 -SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDI 379
S W S+WRSLK+QWDEP+++ RPERVSPWE+EP V PL AQP +SKRPRS +
Sbjct: 320 GSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLT-AQPMQRSKRPRSPVL 378
Query: 380 PASA---SAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHR 436
+ SAF + T SH T ST ++NNS +
Sbjct: 379 SSPTPGLSAFAVK--TNSHSFT---------------------VNYSSTAVSNNSA--YW 413
Query: 437 IVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVV 496
++ V + T + + KK E G LFGI L NSN L
Sbjct: 414 PQQSEPVPELF--------TPVPNKEYGKKKPENGNGYRLFGIQLVDNSNVEETL----- 460
Query: 497 DPTTGTSGVKGSARAASDFDA-----SQNQDLKEVKRGM--ADVSRKETQNKQGSAASTR 549
P T S G + DA SQ ++ + K +D + + + R
Sbjct: 461 -PVTTISSGAGEDQPVVCLDADSDHQSQRSNINQSKTPTVGSDPEKSCLGSSLLQSRQIR 519
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDDEGDMM 608
+ TKV MQG+AVGRAVDLT Y +L +LE+MF+I+G+L P KW VV+TDDE DMM
Sbjct: 520 SCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTDDEDDMM 579
Query: 609 LAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 580 MVGDDPWHEFCSMVRKIFIYTVEEVKELSPKAK 612
>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
Length = 644
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/651 (54%), Positives = 443/651 (68%), Gaps = 39/651 (5%)
Query: 16 GGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
PG D LY ELW+ CAGP+V+VPR GERVYYFPQGH+EQL AS NQE+ + P F+L
Sbjct: 2 NSPGKKDALYHELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSFNLK 61
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHPETDQT-EPRSPDQCLPEPPKQTVHSFCKILT 133
SK+LCRV++ LAE++ DEVY QITL PE EP +PD +P+ K HSFCK+LT
Sbjct: 62 SKVLCRVINSHFLAEEDNDEVYVQITLMPEAPHVPEPTTPDPLIPQDVKPRFHSFCKVLT 121
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSVLRKHA ECLPPLD+ TPTQEL AKDLH EWRFKHIFRGQPRRHLL
Sbjct: 122 ASDTSTHGGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRHLL 181
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWSTFV+SK+LVAGD+FVFLRG NG+LRVGV+RL QQSSMPSSV+SSQSMHLGVLAT
Sbjct: 182 TTGWSTFVSSKKLVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGVLAT 241
Query: 254 AAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
A+HAV T T+F+VYYKPRT+QFI+G+NKYLEA+ H ++VGMRFKM+FE E +P+RRF GT
Sbjct: 242 ASHAVTTQTMFVVYYKPRTTQFIVGVNKYLEALKHEYAVGMRFKMQFEAEGNPDRRFMGT 301
Query: 314 IVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP-AVKSK 372
IVG+ D S QW S WRSLK++WDEPA + RP+RVSPWEI+P+V S P L P A K+K
Sbjct: 302 IVGIDDLSSQWKNSAWRSLKVRWDEPAAIARPDRVSPWEIKPYVCSIPNVLVPPTAEKNK 361
Query: 373 RPR---SIDI---PAS--ASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDS 424
R R I I P+S ASA W T + ++ + S + +++
Sbjct: 362 RHRLHSEIKISEQPSSSNASAVWNPSLRSPQFNTFGINSSTNCALASLTESGWQLPHLNT 421
Query: 425 TIINNNSTDDHRIVAA----QSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGID 480
+ + + +D R VL+ G VI + G+K + C LFGID
Sbjct: 422 SGMLVDEPEDGRSAPTWCGFPCVLAPQFGQGTNQPIVIPTD---GRKCDTKKTCRLFGID 478
Query: 481 LKHNSNTAA-------PLGRKVV-----DPTTGTSGVKGSARAASDFDASQNQDLKEVKR 528
LK +S + P G V P T +G SD + + D K+ +
Sbjct: 479 LKSSSISTTEARLQLQPAGISCVFAERAPPNTVPAG-------DSDQKSELSVDFKDQMQ 531
Query: 529 GMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG 588
G + KE Q+KQ + STR+RTKVQMQG+AVGRAVDLT LKGYD+L ELE+MFEIQG
Sbjct: 532 GHLRLPLKEVQSKQ--SCSTRSRTKVQMQGVAVGRAVDLTILKGYDELTKELEEMFEIQG 589
Query: 589 QLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 639
+L+ R KW ++FTDDEGD ML GD W +FC +V+KIFI S++++K + S
Sbjct: 590 ELQSRQKWGILFTDDEGDTMLMGDYPWQDFCNVVRKIFICSSQDMKKLTLS 640
>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
Length = 672
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/652 (53%), Positives = 434/652 (66%), Gaps = 55/652 (8%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G S LYRELW ACAGPLV VPR GERVYYFPQGH+EQLEAST+Q+L PLF+LPSK
Sbjct: 11 GSSSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSK 70
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
ILC+VV++EL AE ++DEVYAQI L PETDQ+EP S D EP K HSFCK LTASD
Sbjct: 71 ILCKVVNVELRAETDSDEVYAQIMLQPETDQSEPSSADPEPHEPEKCNAHSFCKTLTASD 130
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLR+HA ECLPPLDMT P QEL AKDLH EW F+HIFRGQPRRHLLTTG
Sbjct: 131 TSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFRGQPRRHLLTTG 190
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV+SKRLVAGDAF+FLRG+NG+LRVGVRRL Q ++MPSSVISS SMHLGVLATA+H
Sbjct: 191 WSVFVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASH 250
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
A+ T TLF V+YKPRT S+F++ +NKYLEA ++ SVGMRFKMRFEG+++PERRF+GTI
Sbjct: 251 AISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNNKMSVGMRFKMRFEGDEAPERRFSGTI 310
Query: 315 VGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
+GVG + W S WRSLK+QWDEP+ + RP+RVSPWE+EP VA++ + QP ++KR
Sbjct: 311 IGVGSMTTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELEPLVATS-IQPPQPPARNKR 369
Query: 374 PRSIDIPA-----------------SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRP 416
R P+ SA F + G ++ ++ ++ S +
Sbjct: 370 ARPPASPSIAPEHPPVFGLWKSPGESAQTFSFSGLQRTQEL---YPSSPNSIFSSSLNIG 426
Query: 417 MRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWL 476
+ K ST+ NN R A S Y++S I + K+ + GC L
Sbjct: 427 FKTKNEPSTLPNNQFYWPIRDTRADS----YSAS-------IDKVPASRKQEPTTAGCRL 475
Query: 477 FGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAAS-DFDASQNQDLKEVKRGMA---- 531
FGI++ +P VVD SG AAS D ++ Q V + A
Sbjct: 476 FGIEIGSAVEATSP----VVD----VSGACHEQPAASVDIESDQLSQPSHVNKSDAPAAS 527
Query: 532 -DVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
D S ETQ++Q R+ TKV M+G+AVGRAVDLT L GY+DL +LE+MF+IQG+L
Sbjct: 528 SDRSPYETQSRQ-----VRSCTKVIMEGMAVGRAVDLTRLHGYEDLHQKLEEMFDIQGEL 582
Query: 591 RPR-DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
KW +V+TDDE DMML GDD W EFC MVKK++IYS EE K++ +K
Sbjct: 583 SASLKKWKLVYTDDEDDMMLVGDDPWSEFCSMVKKVYIYSYEEAKHLTPKAK 634
>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
Length = 654
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/670 (52%), Positives = 432/670 (64%), Gaps = 66/670 (9%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA+V N + G + LY+ELW ACAGPLV VPR GERVYYFPQGH+EQLEAST
Sbjct: 1 MAHVAANHFGGGTHPGASANNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEAST 60
Query: 61 NQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP 120
+Q + P F+LP+KILC+V++++L AE ETDEVYAQITL PE DQ E SPD LPEP
Sbjct: 61 HQGVDQHLPSFNLPAKILCKVMNVQLRAESETDEVYAQITLLPEPDQGEITSPDPPLPEP 120
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
K TVHSFCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL A DLHG EW F
Sbjct: 121 EKCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHF 180
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV 240
+HIFRGQPRRHLLTTGWS FV++K+LVAGDAF+FLRG++GELRVGVRRL Q ++MPSSV
Sbjct: 181 RHIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSV 240
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKM 298
ISS SMHLGVLATA+HA+ T TLF V+YKPRTSQ FI+ +NKYLEA +H SVGMRFKM
Sbjct: 241 ISSHSMHLGVLATASHAIMTGTLFSVFYKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKM 300
Query: 299 RFEGEDSPERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
RFEGE+ PERRF+GTIVGVGD S +WP S+WRSLK+ WDEP+++ RP+RVSPW++EP V
Sbjct: 301 RFEGEEVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLV 360
Query: 358 ASAPLNLAQPAVKSKRPRSIDIPA----------------SASAFWYQGSTQSHDI---T 398
A+ P N QP ++KR R +P+ S S+F Y ++ D+
Sbjct: 361 AATPTN-TQPPQRNKRARPSVLPSPVQELPALGMWKSPVDSPSSFSYCDPSRGRDLYPSP 419
Query: 399 QVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVI 458
++ A +G P+ K + + + T+ VA AS RP N
Sbjct: 420 KLSSAAKGLGYGENGSMPLSTKTMYWSSQSETCTES---VAP-------ASEKRPAN--- 466
Query: 459 HEEVERGKKSEASLGCWLFGIDL------KHNSNTAAPLGRKVVDPTTGTSGVKGSARAA 512
GC LFGI+L +S+ A P P S
Sbjct: 467 --------------GCRLFGIELLDCPTIDESSSVAMPSAVVEDQPVP-------SLNVD 505
Query: 513 SDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKG 572
SD ++ + + V S + T Q + R+ TKV MQG AVGRAVDLT L
Sbjct: 506 SDRNSEPSNPIPSVSCEPEKSSLRSTHESQ--SKQIRSCTKVHMQGKAVGRAVDLTRLDS 563
Query: 573 YDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
Y+DL +LE MFEI+G+LR KW VV+TDDE DMM+ GDD W FC MV+KI++Y+ E
Sbjct: 564 YEDLLKKLEVMFEIEGELRGSTKKWQVVYTDDEDDMMMVGDDPWHGFCSMVRKIYVYTAE 623
Query: 632 EVKNMATSSK 641
E K ++ K
Sbjct: 624 EAKKLSPKIK 633
>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
Length = 672
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/666 (51%), Positives = 432/666 (64%), Gaps = 69/666 (10%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
GCS G L+RELW ACAGPLV VPR GE VYYFPQGH+EQLEAST+Q+L
Sbjct: 8 GCS-----GSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHL 62
Query: 69 PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSF 128
PLFDLP KILC+VV++EL AE ++DEVYAQI L PE DQ+EP SPD PEP + V+SF
Sbjct: 63 PLFDLPPKILCKVVNVELRAETDSDEVYAQIMLQPEADQSEPTSPDSEPPEPERCNVYSF 122
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSVLR+HA ECLP LDMT P QEL AKDLHG EW F+HIFRGQP
Sbjct: 123 CKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQP 182
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLLTTGWS FV+SKRLVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS +MHL
Sbjct: 183 RRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHL 242
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
GVLATA+HA+ T TLF V+YKPRT S+F++ +NKYLEA +H SVGMRFKMRFEG++SP
Sbjct: 243 GVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESP 302
Query: 307 ERRFTGTIVGVGDF----SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
ERR +GTI+G+G + W S WRSL++QWDEP+ + RP+RVSPWE+EP A+ P
Sbjct: 303 ERRLSGTIIGLGSMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDATNP- 361
Query: 363 NLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV---RPMRQ 419
QP +++KR R PA S + ++ QV G + + +Q RP +
Sbjct: 362 QPPQPHLRNKRARP---PALLSI--------APELPQVFGFLKSPAEPAQAFSFSRPQQT 410
Query: 420 KEI----------------------DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTV 457
+E+ ST IN++ R Q+ Y++S
Sbjct: 411 QELYHSNPSSIFSSSLNVGFSSKNDRSTPINSHLYWTMR----QTRTESYSAS------- 459
Query: 458 IHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDA 517
I++ K+ A+ GC LFGI++ + +P+ T + G + D ++
Sbjct: 460 INKAPTEKKQESATSGCRLFGIEI---GSAVSPVA------TVASVGQDQPPALSVDVES 510
Query: 518 SQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLF 577
Q + A V+ E + + R+ TKV MQG+AVGRAVDLT L GY DL
Sbjct: 511 DQLSQPSNANKTDAPVASSERSLNESESRQVRSCTKVIMQGMAVGRAVDLTRLDGYADLH 570
Query: 578 DELEKMFEIQGQLRPR-DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+LE+MF+IQG+L KW V++TDDE D ML GDD W EF +MVK+I+IYS EE K++
Sbjct: 571 RKLEEMFDIQGELSANLKKWKVIYTDDEDDTMLVGDDPWNEFLRMVKRIYIYSYEEAKSL 630
Query: 637 ATSSKP 642
+KP
Sbjct: 631 TRKAKP 636
>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
Length = 669
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 346/649 (53%), Positives = 423/649 (65%), Gaps = 43/649 (6%)
Query: 16 GGPG--SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
GG G S L+RELW ACAGPLV VP+ GERVYYFPQGH+EQLEASTNQ+L P+F+L
Sbjct: 8 GGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNL 67
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILT 133
PSKILC VV++EL AE ++DEVYAQI L PE DQ+E S D L + K T HSFCK LT
Sbjct: 68 PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLT 127
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSVLR+HA ECLP LDM+ P QEL AKDLHG EW F+HIFRGQPRRHLL
Sbjct: 128 ASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLL 187
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV+SKRLVAGDAF+FLRGE+GELRVGVRRL Q ++MPSSVISS SMHLGVLAT
Sbjct: 188 TTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLAT 247
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A+HA+ T TLF V+YKPRT S+F++ +NKYLEA SVGMRFKMRFEG+++PERRF+
Sbjct: 248 ASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFS 307
Query: 312 GTIVGVGDF----SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
GTI+G+G W S W+SLK+QWDEP+ + RP+RVSPWE+EP AS P QP
Sbjct: 308 GTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNP-QPPQP 366
Query: 368 AVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV---RPMRQKEIDS 424
+++KR R PAS S ++ G + S +Q + P R +EI
Sbjct: 367 PLRNKRARP---PASPSVV--------AELPPSFGLWKPPSEAAQTLSFSEPQRAREIFP 415
Query: 425 TI----------INNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGC 474
+I + NS ++ I++ Q S S + ++ K+ ++GC
Sbjct: 416 SIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKTRVERKQEPTTMGC 475
Query: 475 WLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAAS-DFDASQNQDLKEVKRGMADV 533
LFGI++ A P SGV S D D+ Q + A
Sbjct: 476 RLFGIEISSAVEEAL--------PAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPG 527
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR 593
+ E + + R+ TKV MQG+AVGRAVDLT L GY DL +LE+MF+IQG L P
Sbjct: 528 TSSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPT 587
Query: 594 -DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+W VV+TDDE DMML GDD W EFC MVK+I+IYS EE K +A SK
Sbjct: 588 LKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSK 636
>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
Length = 673
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 346/649 (53%), Positives = 423/649 (65%), Gaps = 43/649 (6%)
Query: 16 GGPG--SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
GG G S L+RELW ACAGPLV VP+ GERVYYFPQGH+EQLEASTNQ+L P+F+L
Sbjct: 12 GGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNL 71
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILT 133
PSKILC VV++EL AE ++DEVYAQI L PE DQ+E S D L + K T HSFCK LT
Sbjct: 72 PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLT 131
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSVLR+HA ECLP LDM+ P QEL AKDLHG EW F+HIFRGQPRRHLL
Sbjct: 132 ASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLL 191
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV+SKRLVAGDAF+FLRGE+GELRVGVRRL Q ++MPSSVISS SMHLGVLAT
Sbjct: 192 TTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLAT 251
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A+HA+ T TLF V+YKPRT S+F++ +NKYLEA SVGMRFKMRFEG+++PERRF+
Sbjct: 252 ASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFS 311
Query: 312 GTIVGVGDF----SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
GTI+G+G W S W+SLK+QWDEP+ + RP+RVSPWE+EP AS P QP
Sbjct: 312 GTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNP-QPPQP 370
Query: 368 AVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV---RPMRQKEIDS 424
+++KR R PAS S ++ G + S +Q + P R +EI
Sbjct: 371 PLRNKRARP---PASPSVV--------AELPPSFGLWKPPSEAAQTLSFSEPQRAREIFP 419
Query: 425 TI----------INNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGC 474
+I + NS ++ I++ Q S S + ++ K+ ++GC
Sbjct: 420 SIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKTRVERKQEPTTMGC 479
Query: 475 WLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAAS-DFDASQNQDLKEVKRGMADV 533
LFGI++ A P SGV S D D+ Q + A
Sbjct: 480 RLFGIEISSAVEEAL--------PAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPG 531
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR 593
+ E + + R+ TKV MQG+AVGRAVDLT L GY DL +LE+MF+IQG L P
Sbjct: 532 TSSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPT 591
Query: 594 -DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+W VV+TDDE DMML GDD W EFC MVK+I+IYS EE K +A SK
Sbjct: 592 LKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSK 640
>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 657
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 355/673 (52%), Positives = 438/673 (65%), Gaps = 43/673 (6%)
Query: 6 PNFGCSLSSQGGPG--SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTN-Q 62
PN G + GPG S LY+ELW ACAGPLV VPR GERVYYFPQGH+EQLEAS + Q
Sbjct: 4 PNPGAA----AGPGMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQ 59
Query: 63 ELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK 122
+L P+FDLP KILCRVV++EL AE ++DEVYAQI L PE DQ E S D E K
Sbjct: 60 QLDQYLPMFDLPPKILCRVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDAEPQEREK 119
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
T HSFCK LTASDTSTHGGFSVLR+HA ECLP LDM+ P QEL AKDLHG EW F+H
Sbjct: 120 CTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRH 179
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS 242
IFRGQP+RHLLTTGWS FV+SKRLV+GDAF+F+RGENGELRVGVRRL Q +SMPSSVIS
Sbjct: 180 IFRGQPKRHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVIS 239
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRF 300
S SMHLGVLATA+HA+ T TLF V+YKPRTS+ FI+ +NKYLEA SVGMRFKMRF
Sbjct: 240 SHSMHLGVLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRF 299
Query: 301 EGEDSPERRFTGTIVGVGDFSEQ----WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF 356
EG+D+PERRF+GTI+G+G W S WRSLK+QWDEP+++ RP+R+SPWE+EP
Sbjct: 300 EGDDAPERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPL 359
Query: 357 VASAPLNLAQPAVKSKRPRSIDIPASASAF-----WYQGSTQSHDITQVVGATEGQSSES 411
A+ P + QP +++KRPR P S ++ +S + + +E Q +
Sbjct: 360 DAANPQS-PQPPLRAKRPRPPASPCMVSELPSGFGLWKSPIES---SCTLSFSEPQRARE 415
Query: 412 QVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSG----YASSGRPGNTVIHEEVERGKK 467
S+ ++ NS ++ ++ +Q S S NTV+ E+ K+
Sbjct: 416 LFPSIPTSTLSSSSNVSFNSKNEPSMLTSQFYWSARHTRADSCAASTNTVVIEK----KQ 471
Query: 468 SEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVK 527
+S GC LFGI++ P +V P G S SD SQ D+
Sbjct: 472 EPSSGGCRLFGINICSAEEEVLP---EVTAPGVGYEQTAASVELNSD-KLSQPSDVNNSD 527
Query: 528 RGMADVSRK--ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
A R E+Q++Q R+ TKV MQG+AVGRAVDLT L GY DL +LE+MF+
Sbjct: 528 ALAASSERSPLESQSRQ-----VRSCTKVIMQGMAVGRAVDLTKLSGYSDLCQKLEEMFD 582
Query: 586 IQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK-PI 643
IQG+L KW V+FTDDE DMML GDD W EFC+MVK+I+IY+ EE K + + SK P+
Sbjct: 583 IQGELGSTLKKWRVIFTDDEDDMMLVGDDPWDEFCRMVKRIYIYTYEEAKKLTSKSKLPV 642
Query: 644 ASSVEGEGTAISL 656
+S A SL
Sbjct: 643 SSDSSKLSAANSL 655
>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
Length = 673
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 343/639 (53%), Positives = 428/639 (66%), Gaps = 38/639 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV +PR GERVYYFPQGH+EQLEAS +Q L HQ P FDLPSKILC+V
Sbjct: 19 LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSKILCKVA 78
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
++ AE +TDEVYAQITL PE DQ+E SPD L EP + VHSFCK LTASDTSTHGG
Sbjct: 79 SVQRKAEPDTDEVYAQITLVPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTHGG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA +CLPPLDMT P QEL A DLHG EW F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 139 FSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 198
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGDAF+FLRG NG+LRVGVRRL QQ++MPSSVISS SMHLGVLATA++A+ T +
Sbjct: 199 SKKLVAGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLGVLATASYALSTRS 258
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV-GD 319
+F ++YKPRT S+FI+ +NKYLEA H SVGMRFKMRFEGE+ PERRF+GTIVGV D
Sbjct: 259 MFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEAD 318
Query: 320 FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDI 379
S W S+WRSLK+QWDEP+++ RP+RVSPWE+EP VA++ +++QPA ++KR R +
Sbjct: 319 KSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPAQRNKRARPPVL 378
Query: 380 PASASAFWYQGSTQS--HDITQVVGATEGQSSE--SQVVRPMRQKEIDSTIINNNSTDDH 435
P+ +S G +S A GQ S S +P +S + NS+
Sbjct: 379 PSPSSDLSSLGIWKSPVESPFSYCDAQRGQPSPKLSSTAKP------NSVGFSGNSSLAA 432
Query: 436 RIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKV 495
+++ + + V+++E K+ + GC LFGI L N N
Sbjct: 433 VSSSSKYWPNRVENVTESVAPVVNKESSERKQGTGN-GCRLFGIQLIDNINMEE------ 485
Query: 496 VDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV------------SRKETQNKQG 543
P SG + + DA+ +Q +D+ S +E+Q+KQ
Sbjct: 486 NSPLATISGTGVNDQPLHSLDANSDQQSDPSNLNQSDLPSISCEPEKCLRSPQESQSKQ- 544
Query: 544 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTD 602
R+ TKV MQG+AVGRAVDLT Y+DL +LE MF+I+GQL K W VV+TD
Sbjct: 545 ----IRSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKNWQVVYTD 600
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
DE DMM+ GDD W EFC MV+KIFIY++EEV+ ++ K
Sbjct: 601 DEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVRKLSPKIK 639
>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 660
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 339/651 (52%), Positives = 431/651 (66%), Gaps = 50/651 (7%)
Query: 14 SQGGPG---SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
S G PG S L RELW ACAGPLV +PR GERVYYFP+GH+EQLEAS +Q L Q P
Sbjct: 7 SSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPS 66
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCK 130
F+LPSKILC+V++I+ AE ETDEVYAQITL PE DQ+EP SPD + EP K TVHSFCK
Sbjct: 67 FNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCK 126
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLH EW F+HIFRGQPRR
Sbjct: 127 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRR 186
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV+SK+LVAGDAF+FLRGEN ELRVGVRR QQ+++PSSVISS SMH+GV
Sbjct: 187 HLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGV 246
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LATAAHA+ T T+F V+YKPRT S+FI+ +N+YLEA SVGMRFKMRFEGE++PE+
Sbjct: 247 LATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEK 306
Query: 309 RFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQ 366
RF+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + Q
Sbjct: 307 RFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQ 366
Query: 367 PAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEG---QSSESQVVRPMRQKEID 423
P ++KRPR +P+ A+ G ++G +++ P+
Sbjct: 367 PPQRNKRPRPPGLPSPAT-----------------GPSDGVWKSPADTPSSVPLFSPPAK 409
Query: 424 STIINNNSTDDHRIVAAQSVLSGYA-SSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
+ + + + A S+ + + E K++ ++ C LFG +L
Sbjct: 410 AATFGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNV-CRLFGFELV 468
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARA-----ASDFDASQ-----NQDLKEVKRGMAD 532
N N VD + V G+ +++FD+ Q N + ++ G D
Sbjct: 469 ENVN---------VDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGD 519
Query: 533 VSRKETQNKQGSAA-STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQ-L 590
+ ++ Q S + R+ TKV MQG AVGRA+DLT + Y+DLF +LE+MF+I+G+ L
Sbjct: 520 PEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELL 579
Query: 591 RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
KW VV+TDDE DMM+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 580 ESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 630
>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 665
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 341/648 (52%), Positives = 430/648 (66%), Gaps = 39/648 (6%)
Query: 14 SQGGPG---SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
S G PG S L RELW ACAGPLV +PR GERVYYFP+GH+EQLEAS +Q L Q P
Sbjct: 7 SSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPS 66
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCK 130
F+LPSKILC+V++I+ AE ETDEVYAQITL PE DQ+EP SPD + EP K TVHSFCK
Sbjct: 67 FNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCK 126
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLH EW F+HIFRGQPRR
Sbjct: 127 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRR 186
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV+SK+LVAGDAF+FLRGEN ELRVGVRR QQ+++PSSVISS SMH+GV
Sbjct: 187 HLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGV 246
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LATAAHA+ T T+F V+YKPRT S+FI+ +N+YLEA SVGMRFKMRFEGE++PE+
Sbjct: 247 LATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEK 306
Query: 309 RFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQ 366
RF+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + Q
Sbjct: 307 RFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQ 366
Query: 367 PAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTI 426
P ++KRPR +P+ A+ S +T + S V P+ +
Sbjct: 367 PPQRNKRPRPPGLPSPATG-------PSGPVTPDGVWKSPADTPSSV--PLFSPPAKAAT 417
Query: 427 INNNSTDDHRIVAAQSVLSGYA-SSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNS 485
+ + + A S+ + + E K++ ++ C LFG +L N
Sbjct: 418 FGHGGNKSFGVSIGSAFWPTNADSAAESFASAFNNESTEKKQTNGNV-CRLFGFELVENV 476
Query: 486 NTAAPLGRKVVDPTTGTSGVKGSARA-----ASDFDASQ-----NQDLKEVKRGMADVSR 535
N VD + V G+ +++FD+ Q N + ++ G D +
Sbjct: 477 N---------VDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEK 527
Query: 536 KETQNKQGSAA-STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQ-LRPR 593
++ Q S + R+ TKV MQG AVGRA+DLT + Y+DLF +LE+MF+I+G+ L
Sbjct: 528 SSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLEST 587
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
KW VV+TDDE DMM+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 588 KKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 635
>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 345/657 (52%), Positives = 430/657 (65%), Gaps = 60/657 (9%)
Query: 14 SQGGPG---SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
S G PG S L RELW ACAGPLV +PR GERVYYFP+GH+EQLEAS +Q L Q P
Sbjct: 7 SSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPS 66
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCK 130
F+LPSKILC+V++I+ AE ETDEVYAQITL PE DQ+EP SPD + EP K TVHSFCK
Sbjct: 67 FNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCK 126
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLH EW F+HIFRGQPRR
Sbjct: 127 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRR 186
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV+SK+LVAGDAF+FLRGEN ELRVGVRR QQ+++PSSVISS SMH+GV
Sbjct: 187 HLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGV 246
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LATAAHA+ T T+F V+YKPRT S+FI+ +N+YLEA SVGMRFKMRFEGE++PE+
Sbjct: 247 LATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEK 306
Query: 309 RFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQ 366
RF+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + Q
Sbjct: 307 RFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQ 366
Query: 367 PAVKSKRPRSIDIPASAS------AFWYQGSTQSHDI----TQVVGATEGQSSESQVVRP 416
P ++KRPR +P+ A+ W + + AT G
Sbjct: 367 PPQRNKRPRPPGLPSPATGPSGPDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSF--- 423
Query: 417 MRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWL 476
I S N+ AA+S S + + E K++ ++ C L
Sbjct: 424 --GVSIGSAFWPTNADS-----AAESFASAF-----------NNESTEKKQTNGNV-CRL 464
Query: 477 FGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARA-----ASDFDASQ-----NQDLKEV 526
FG +L N N VD + V G+ +++FD+ Q N + ++
Sbjct: 465 FGFELVENVN---------VDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDI 515
Query: 527 KRGMADVSRKETQNKQGSAA-STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
G D + ++ Q S + R+ TKV MQG AVGRA+DLT + Y+DLF +LE+MF+
Sbjct: 516 PSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD 575
Query: 586 IQGQ-LRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
I+G+ L KW VV+TDDE DMM+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 576 IKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 632
>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
Length = 660
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 344/652 (52%), Positives = 423/652 (64%), Gaps = 58/652 (8%)
Query: 16 GGPG--SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
GG G S L+RELW ACAGPLV VP+ GERVYYFPQGH+EQLEASTNQ+L P+F+L
Sbjct: 8 GGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNL 67
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILT 133
PSKILC VV++EL AE ++DEVYAQI L PE DQ+E S D L + K T HSFCK LT
Sbjct: 68 PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLT 127
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSVLR+HA ECLP LDM+ P QEL AKDLHG EW F+HIFRGQPRRHLL
Sbjct: 128 ASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLL 187
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV+SKRLVAGDAF+FLRGE+GELRVGVRRL Q ++MPSSVISS SMHLGVLAT
Sbjct: 188 TTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLAT 247
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A+HA+ T TLF V+YKPRT S+F++ +NKYLEA SVGMRFKMRFEG+++PERRF+
Sbjct: 248 ASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFS 307
Query: 312 GTIVGVGDFSEQ----WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
GTI+G+G W S W+SLK+QWDEP+ + P+RVSPWE+EP AS P QP
Sbjct: 308 GTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDASNP-QPPQP 366
Query: 368 AVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV---RPMRQKEIDS 424
+++KR R PAS S ++ G + S +Q + P R +EI
Sbjct: 367 PLRNKRARP---PASPSVV--------AELPPSFGLWKPPSEAAQTLSFSEPQRAREIFP 415
Query: 425 TI----------INNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGC 474
+I + NS ++ I++ Q S S + ++ K+ ++GC
Sbjct: 416 SIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKARVERKQEPTTMGC 475
Query: 475 WLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVS 534
LFGI++ A P SGV G + D +Q +S
Sbjct: 476 RLFGIEISSAVEEAL--------PAATVSGV-GYDQTVLSVDVDSDQ-----------IS 515
Query: 535 RKETQNKQGSAASTRTRT----KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
+ NK + ++ R+ KV MQG+AVGRAVDLT L GY DL +LE+MF+IQG L
Sbjct: 516 QPSNGNKSDAPGTSSERSPLSPKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDL 575
Query: 591 RPR-DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
P +W VV+TDDE DMML GDD W EFC MVK+I+IYS EE K +A SK
Sbjct: 576 CPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSK 627
>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 339/643 (52%), Positives = 426/643 (66%), Gaps = 36/643 (5%)
Query: 16 GGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
GG S L ELW ACAGPLV +PR GERVYYFP+GH+EQLEAS +Q L Q P F+LPS
Sbjct: 12 GGVLSDALCTELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPS 71
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILC+V++I+ AE ETDEVYAQITL PE DQ EP SPD + EP K TVHSFCK LTAS
Sbjct: 72 KILCKVINIQRRAEPETDEVYAQITLLPELDQNEPTSPDAPVQEPEKCTVHSFCKTLTAS 131
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLH EW F+HIFRGQPRRHLLTT
Sbjct: 132 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTT 191
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV+SK+LVAGDAF+FLRGEN ELRVGVRR QQ+++PSSVISS SMH+GVLATAA
Sbjct: 192 GWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAA 251
Query: 256 HAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
HA+ T T+F V+YKPRT S+FI+ +N+YLEA SVGMRFKMRFEGE++PE+RF+GT
Sbjct: 252 HAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGT 311
Query: 314 IVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQPAVKS 371
IVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP ++
Sbjct: 312 IVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRN 371
Query: 372 KRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNS 431
KRPR +P+ + S +T + S V P+ + +
Sbjct: 372 KRPRPPGLPSPTTG-------PSAPVTPDGVWKSPADTPSSV--PLFSPPAKAATFGHGG 422
Query: 432 TDDHRIVAAQSVLSGYA-SSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAP 490
+ + +A S+ + + E K++ ++ C LFG +L N N
Sbjct: 423 NKSFGVSIGSAFWPSHADSAAESFASAFNNESTEKKQTNGNV-CRLFGFELVENVN---- 477
Query: 491 LGRKVVDPTTGTSGVKGSARA-----ASDFDASQ-----NQDLKEVKRGMADVSRKETQN 540
VD + V G+ +++FD+ Q N + ++ G D ++
Sbjct: 478 -----VDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSDDPENSSLRS 532
Query: 541 KQGSAA-STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQ-LRPRDKWAV 598
Q S + R+ TKV MQG AVGRAVDLT + Y+DLF +LE+MFEI+G+ L+ KW V
Sbjct: 533 PQESQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFEIKGELLKSTKKWQV 592
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
V+TDDE DMM+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 593 VYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 635
>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 344/657 (52%), Positives = 429/657 (65%), Gaps = 60/657 (9%)
Query: 14 SQGGPG---SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
S G PG S L RELW ACAGPLV +PR GERVYYFP+GH+EQLEAS +Q L Q P
Sbjct: 7 SSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPS 66
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCK 130
F+LPSKILC+V++I+ AE ETDEVYAQITL PE DQ+EP SPD + EP K TVHSFCK
Sbjct: 67 FNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCK 126
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTST GGFSVLR+HA +CLPPLDM+ P QEL A DLH EW F+HIFRGQPRR
Sbjct: 127 TLTASDTSTQGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRR 186
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV+SK+LVAGDAF+FLRGEN ELRVGVRR QQ+++PSSVISS SMH+GV
Sbjct: 187 HLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGV 246
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LATAAHA+ T T+F V+YKPRT S+FI+ +N+YLEA SVGMRFKMRFEGE++PE+
Sbjct: 247 LATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEK 306
Query: 309 RFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQ 366
RF+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + Q
Sbjct: 307 RFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQ 366
Query: 367 PAVKSKRPRSIDIPASAS------AFWYQGSTQSHDI----TQVVGATEGQSSESQVVRP 416
P ++KRPR +P+ A+ W + + AT G
Sbjct: 367 PPQRNKRPRPPGLPSPATGPSGPDGVWKSPADTPSSVPLFSPPAKAATFGHGGNKSF--- 423
Query: 417 MRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWL 476
I S N+ AA+S S + + E K++ ++ C L
Sbjct: 424 --GVSIGSAFWPTNADS-----AAESFASAF-----------NNESTEKKQTNGNV-CRL 464
Query: 477 FGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARA-----ASDFDASQ-----NQDLKEV 526
FG +L N N VD + V G+ +++FD+ Q N + ++
Sbjct: 465 FGFELVENVN---------VDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDI 515
Query: 527 KRGMADVSRKETQNKQGSAA-STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
G D + ++ Q S + R+ TKV MQG AVGRA+DLT + Y+DLF +LE+MF+
Sbjct: 516 PSGSGDPEKSSLRSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFD 575
Query: 586 IQGQ-LRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
I+G+ L KW VV+TDDE DMM+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 576 IKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 632
>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
Length = 665
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 333/651 (51%), Positives = 419/651 (64%), Gaps = 52/651 (7%)
Query: 16 GGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
GG S L RELW ACAGPLV +PR GERVYYFP+GH+EQLEAS +Q L Q P F+LPS
Sbjct: 12 GGALSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPS 71
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILC+V++I+ AE ETDEVYAQITL PE DQ+EP SPD + EP K TVHSFCK LTAS
Sbjct: 72 KILCKVINIQRRAEPETDEVYAQITLLPEADQSEPMSPDAPVQEPEKCTVHSFCKTLTAS 131
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLR+HA +CLPPLDM+ P QEL A DLH EW F+HIFRGQPRRHLLTT
Sbjct: 132 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTT 191
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV+SK+LVAGDAF+FLRGEN ELRVGVRR QQ+++PSSVISS SMH+GVLATAA
Sbjct: 192 GWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAA 251
Query: 256 HAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
HA+ T T+F V+YKPRT S+FI+ +N+YLEA + +VGMRFKMRFEGE++PE+RF+GT
Sbjct: 252 HAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEEAPEKRFSGT 311
Query: 314 IVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
IVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA+ + P ++K
Sbjct: 312 IVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPSAHLPPQRNK 371
Query: 373 RPRSIDI---------PASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEID 423
RPR + P +A W + + P+
Sbjct: 372 RPRPPGLLSPTTAPSTPVTADGVWKSPADNPSSV------------------PLFSPPAK 413
Query: 424 STIINNNSTDDHRIVAAQSVLSGYAS-SGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
+ + + +A + + ++ E KK C LFG +L
Sbjct: 414 TAAFGLGGNKSFGVSIGSAFWPTHADGAAESFASALNNESPTEKKQTNGNVCRLFGFELV 473
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARA-----ASDFDASQ-----NQDLKEVKRGMAD 532
N N VD + V G+ +++FD+ Q N + + G D
Sbjct: 474 ENMN---------VDECFSAASVSGAVAVDQPVPSNEFDSGQQSESLNINQANLPSGSGD 524
Query: 533 VSRKETQNKQGSAA-STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQ-L 590
+ ++ Q S + R+ TKV MQG AVGRAVDLT + Y+DLF +LE+MF+I+G+ L
Sbjct: 525 HEKSSLRSPQKSQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELL 584
Query: 591 RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
KW VV+TDDE DMM+ GDD W EFC MV+KIFIY+ EEVK ++ +K
Sbjct: 585 ESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNK 635
>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 584
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 335/576 (58%), Positives = 396/576 (68%), Gaps = 36/576 (6%)
Query: 11 SLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
S S G G DLY ELW+ACAGPLV++PR ERV+YFPQGH+EQLEASTN EL + PL
Sbjct: 12 SCVSAQGCGRDDLYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRIPL 71
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCK 130
F+L SKILCRV+HIE LA+ E+DEVYAQITL PE++Q EP+S D C PEPP+ VHSFCK
Sbjct: 72 FNLDSKILCRVIHIEPLADHESDEVYAQITLMPESNQNEPKSMDPCPPEPPRPVVHSFCK 131
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
+LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQ+L AKDLHGYEWRFKHIFRGQPRR
Sbjct: 132 VLTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRR 191
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWSTFVTSKRL AGD+FVFLRG+NGELRVGVRR A QQSSMP SVISSQSMHLGV
Sbjct: 192 HLLTTGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGV 251
Query: 251 LATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
LATA+HAV T T F+VYYKPRT QFII LNKYLEAV++ FSVGMRF M FEGEDSPERRF
Sbjct: 252 LATASHAVTTQTRFVVYYKPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRF 311
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
+GTI+G D S WP S WRSL++QWDE ++ RP+RVSPW+IEP +SA L+QP K
Sbjct: 312 SGTIIGAVDISPHWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPXFK 371
Query: 371 SKRPRSIDIPASASA------FWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI-- 422
+KRPR PA A W G QSHD Q A EG+ E+ R+ +
Sbjct: 372 NKRPRQ-PTPAHDGADLTKPTHWDSGLAQSHDGKQCSNAAEGRKGENNESCHHRETDTIS 430
Query: 423 DSTIINNNSTD--------------------DHRIVAAQ--SVLSGYASSG--RPGNTVI 458
+S+ ++ TD D + V + + L G +S + + I
Sbjct: 431 NSSCVSRTQTDTWLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTSHLVKLSDDQI 490
Query: 459 HEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDAS 518
+ +E GKK E C LFGIDL H + A + ++ T G + A S
Sbjct: 491 LDPIESGKKGETVASCRLFGIDLNHLA--AEKASSQPSSGSSDTDGRISTLSVAQSDPKS 548
Query: 519 QNQDLK-EVKRGMADVSRKETQNKQGSAASTRTRTK 553
N ++ E K ++ S KE Q Q S+A+TR+RTK
Sbjct: 549 DNLEVSIERKSELSQASLKEIQCNQSSSANTRSRTK 584
>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
Length = 677
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 344/657 (52%), Positives = 437/657 (66%), Gaps = 54/657 (8%)
Query: 14 SQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
++G +GD L+RELW ACAGPLV VPR GE VYYFPQGH+EQLEAST+Q+L PLF+
Sbjct: 7 ARGSGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFN 66
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKIL 132
LP KILC+VV++EL AE ++DEVYAQI L P+T+Q+EP SPD PEP + +HSFCK L
Sbjct: 67 LPHKILCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHSFCKTL 126
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSVLR+HA ECLP LDMT P QEL AKDLHG EW F+HIFRGQPRRHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHL 186
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV+SKRLVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS SMHLGVLA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLA 246
Query: 253 TAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
TA+HA+ T TLF V+YKPRTS +F++ +NKYLEA +H SVGMRFKMRFEG++SPERRF
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRF 306
Query: 311 TGTIVGVG----DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
+GTI+G+G + + W S+WRSLK+QWDEP+ + RP+RVSPWE+EP + P Q
Sbjct: 307 SGTIIGMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEPLDRTNP-QPPQ 365
Query: 367 PAVKSKRPRSIDIPA-----------------SASAFWYQGSTQSHDITQVVGATEGQSS 409
P +++KR R P+ A AF + G ++ ++ ++ SS
Sbjct: 366 PPLRNKRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFSGLQRTQELYHSSPSSMFSSS 425
Query: 410 ESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSE 469
+ P + +T N+ R +S Y++S I++ K+
Sbjct: 426 LNVGFNPKYEGPTPNT---NHLYWTMRETRTES----YSAS-------INKAPTEKKQES 471
Query: 470 ASLGCWLFGIDLKHNSN----TAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKE 525
+ GC LFGI++ ++ T A +G DP V + S S +
Sbjct: 472 TTSGCRLFGIEIGSSAVSPVVTVASVGH---DPPPPALSVDAESDQLSQ--PSHANKATD 526
Query: 526 VKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
+D S ET+++Q R+ TKV MQG+AVGRAVDLT L GYDDL +LE+MF+
Sbjct: 527 APAASSDRSPNETESRQA-----RSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFD 581
Query: 586 IQGQLRPR-DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
I G+L KW V++TDDE DMML GDD W EFC+MVK+I+IYS EE K++ +K
Sbjct: 582 IPGELSASLKKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSLTPKAK 638
>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
Length = 681
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 346/655 (52%), Positives = 427/655 (65%), Gaps = 24/655 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV +PR GERVYYFPQGH+EQLEAS +Q L Q P F+LPSKILC+VV
Sbjct: 27 LYRELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILCKVV 86
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
+++ AE ETDEVYAQITL PE D E SPD PEP K TVHSFCK LTASDTSTHGG
Sbjct: 87 NVQRRAEPETDEVYAQITLLPEPDPNEVTSPDPPPPEPEKCTVHSFCKTLTASDTSTHGG 146
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA +CLPPLDM+ P QEL A DLHG EW F+HIFRGQPRRHLLTTGWS FV+
Sbjct: 147 FSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 206
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGDAF+FLRGE GELRVGVRR QQ++MPSSVISS SMHLGVLATA+HA+ T T
Sbjct: 207 SKKLVAGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHLGVLATASHAIATGT 266
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
LF ++YKPRT S+FI+ +NKYLEA H SVGMRFKMRFEGE+ P+ F+G IVGV D
Sbjct: 267 LFSIFYKPRTSRSEFIVSVNKYLEARKHKLSVGMRFKMRFEGEEVPDEGFSGIIVGVEDN 326
Query: 321 -SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA---PLNLAQPAVKSKRPRS 376
+ WP S+WRSLK+QWDEP+++ RP+RVS WE+EP VA+ P +QPA ++KR R
Sbjct: 327 KTSAWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPPNSQPAQRNKRARP 386
Query: 377 IDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHR 436
+P A G +S +Q ++ Q + P K +T N +
Sbjct: 387 PVLPTPAPDLSVLGMWKSPVESQAFSYSDSQHGRDLYLSP---KFSPATKANPLGFGGNS 443
Query: 437 IVAAQSVLSGYASSGRPGNTVIHE-----EVERGKKSEASLGCW-LFGIDLKHNSNTAAP 490
+AA + S Y + G V+ E +K + + + LFGI L NSN
Sbjct: 444 SLAAVTGNSMYWPNR--GENVMESFAPVVSKESSEKRQGTGNTYKLFGIQLVDNSNIEES 501
Query: 491 LGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAA-STR 549
+ T G S D D+ Q+ + + D + ++ Q S + R
Sbjct: 502 SAAVTMSATVGDDRPVPSL----DADSEQHSEPSNIPSVSCDAEKSCLRSPQESQSRQIR 557
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMM 608
+ TKV MQGIAVGRAVDLT YDDL LE+MF+I G+L KW VV+TDDE DMM
Sbjct: 558 SCTKVHMQGIAVGRAVDLTRFDRYDDLLKRLEEMFDIGGELSGATKKWQVVYTDDEDDMM 617
Query: 609 LAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSE 663
+ GDD W EFC MV+KIFIY+ EEVK ++ K + S+ E + +D+ + +E
Sbjct: 618 MVGDDPWHEFCSMVRKIFIYTAEEVKRLSPKIK-LTSNEEVKPAKPDVDTAVNAE 671
>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
Length = 1055
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 345/619 (55%), Positives = 400/619 (64%), Gaps = 96/619 (15%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPSKILCRV 81
LY ELWKACAGPLVEVP GERV+YFPQGH+EQL ASTNQ + ++ P F LP KILC+V
Sbjct: 21 LYTELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQGIESEKIPDFKLPPKILCQV 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ + L AE +TDEVYAQITL PE DQ+EP S D + EP KQ HSF KILTASDTSTHG
Sbjct: 81 LSVMLKAEHDTDEVYAQITLKPEEDQSEPTSLDPPIVEPTKQMFHSFVKILTASDTSTHG 140
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLRKHATECLP LDMT A PTQEL +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV
Sbjct: 141 GFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFV 200
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAFVFLRGENG+LRVGVRRLA Q++MP+SVISSQSMHLGVLATA+HAV T
Sbjct: 201 SSKRLVAGDAFVFLRGENGDLRVGVRRLARHQNTMPASVISSQSMHLGVLATASHAVNTQ 260
Query: 262 TLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
T+F+V+YKPR SQFI+ +NKY+EA+ H FS+G RF+MRFEGE+SPER FTGTIVG+GD S
Sbjct: 261 TMFLVFYKPRISQFIVSVNKYMEAMKHGFSLGTRFRMRFEGEESPERIFTGTIVGIGDLS 320
Query: 322 EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPA 381
QW PA+ R +V W+ EP P ++ ++ P S PA
Sbjct: 321 S------------QW--PASTWRSLQVQ-WD-EPTTVQRPDKVSPWEIEPFLPSS---PA 361
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQ 441
S T Q S+ + R K I+S
Sbjct: 362 S---------------------TPSQQSQP---KSKRSKPIES----------------- 380
Query: 442 SVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTG 501
SS PG AS LFG DL N P ++ +D +
Sbjct: 381 -------SSLSPGQASFLGVQAEPPPPPASSCYRLFGFDLTSNPPAPIPPDKQPMDTS-- 431
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAV 561
+A++ QD + S E + +Q S RTRTKVQMQGIAV
Sbjct: 432 --------------EAAKCQD------PITPSSVNEPKKQQTS----RTRTKVQMQGIAV 467
Query: 562 GRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKM 621
GRAVDLT LK YD+L ELE+MFEIQGQL PRDKW VVFTDDEGDMMLAGDD W EFCKM
Sbjct: 468 GRAVDLTLLKSYDELIKELEEMFEIQGQLLPRDKWIVVFTDDEGDMMLAGDDPWNEFCKM 527
Query: 622 VKKIFIYSTEEVKNMATSS 640
KKIFIYS++E N+ SS
Sbjct: 528 AKKIFIYSSDE--NLLPSS 544
>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
Length = 693
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 333/642 (51%), Positives = 419/642 (65%), Gaps = 53/642 (8%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
S L+ ELW ACAGPL+ VPR GERVYYFPQGHIEQLEASTNQ+L P+F+LPSKILC
Sbjct: 68 SDALFHELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMFNLPSKILC 127
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRS--PDQCLPEPPKQTVHSFCKILTASDT 137
VV++EL E ++DEVYAQI L P+ +Q+E S P Q E + T+HSFCK LTASDT
Sbjct: 128 SVVNVELRTEADSDEVYAQIMLQPQDEQSELTSAGPPQ---ELERGTIHSFCKTLTASDT 184
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSVLR+HA ECLP LDM+ P QEL AKDLHG EW F+HIFRGQPRRHLLTTGW
Sbjct: 185 STHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGW 244
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV+SKRLVAGDAF+FLRG NGELRVGVRR Q ++MPSSVISS SMHLGVLATA+HA
Sbjct: 245 SVFVSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHLGVLATASHA 304
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ T TLF V+YKPRT S+F++ +NKYLEA SVGMRFKM+FEG+++ ERRF+GTIV
Sbjct: 305 ISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNMSVGMRFKMKFEGDEALERRFSGTIV 364
Query: 316 GVGDF----SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKS 371
G+G S QW S W+SLK+QWDEP+++ RP+RVS WE+EP ++ P +P +++
Sbjct: 365 GMGSTPTMPSSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEPLDSANP-QTPEPPLRN 423
Query: 372 KRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV---RPMRQKEIDSTII- 427
KR R++ P+ D+ G + S SQ + P R +E+ T I
Sbjct: 424 KRARALASPSVVP-----------DLPPNFGLWKSPSEPSQTLSFSEPQRARELFPTSIF 472
Query: 428 --NNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNS 485
N D ++ YA+S N V ER + + GC LFGI++
Sbjct: 473 SSTNVMFDQFYWPGRETKDGSYAAS---TNKVT---AERKHEPTTTGGCRLFGIEISSTV 526
Query: 486 NTAAPLGRKVVDPTTGTSGVKGSARAASDFDAS-----QNQDLKEVKRGMADVSRKETQN 540
P+ T + G A+ D D+S N + + G ++ + ETQ+
Sbjct: 527 EETQPV-------VTASVGDHDQTAASVDMDSSVLSQPSNINNSDAPAGSSERALLETQS 579
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVV 599
+Q R+ TKV M+G+AVGRAVDL L GY DL +LE+MF+I G+L +W VV
Sbjct: 580 RQ-----VRSCTKVIMKGMAVGRAVDLARLDGYGDLHRKLEEMFDIHGELCSTLKRWQVV 634
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+ DDE DMML GDD W EFC MVK+I+IYS EE K +A +K
Sbjct: 635 YADDEDDMMLVGDDPWDEFCGMVKRIYIYSYEEAKQLAPKAK 676
>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
Length = 676
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 341/657 (51%), Positives = 435/657 (66%), Gaps = 55/657 (8%)
Query: 14 SQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
++G +GD L+RELW ACAGPLV VPR GE VYYFPQGH+EQLEAST+Q+L PLF+
Sbjct: 7 ARGSGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFN 66
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKIL 132
LP KILC+VV++EL AE ++DEVYAQI L P+T+Q+EP SPD PEP + +HSFCK L
Sbjct: 67 LPHKILCKVVNVELRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHSFCKTL 126
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHG SVLR+HA ECLP LDMT P QEL AKDLHG EW F+HIFRGQPRRHL
Sbjct: 127 TASDTSTHG-LSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHL 185
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV+SKRLVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS SMHLGVLA
Sbjct: 186 LTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLA 245
Query: 253 TAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
TA+HA+ T TLF V+YKPRTS +F++ +NKYLEA +H SVGMRFKMRFEG++SPERRF
Sbjct: 246 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRF 305
Query: 311 TGTIVGVG----DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
+G I+G+G + + W S+WRSLK+QWDEP+ + RP+RVSPWE+EP + P Q
Sbjct: 306 SGIIIGMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEPLNRTNP-QPPQ 364
Query: 367 PAVKSKRPRSIDIPA-----------------SASAFWYQGSTQSHDITQVVGATEGQSS 409
P +++KR R P+ A AF + G ++ ++ ++ SS
Sbjct: 365 PPLRNKRARPPASPSIAPELAPVFGFWKSPAEPAQAFSFSGLQRTQELYHSSPSSMFSSS 424
Query: 410 ESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSE 469
+ P + +T N+ R +S Y++S I++ K+
Sbjct: 425 LNVGFNPKYEGPTPNT---NHLYWTMRETRTES----YSAS-------INKAPTEKKQES 470
Query: 470 ASLGCWLFGIDLKHNSN----TAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKE 525
+ GC LFGI++ ++ T A +G DP V + S S +
Sbjct: 471 TTSGCRLFGIEIGSSAVSPVVTVASVGH---DPPPPALSVDAESDQLSQ--PSHANKATD 525
Query: 526 VKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
+D S ET+++Q R+ TKV MQG+AVGRAVDLT L GYDDL +LE+MF+
Sbjct: 526 APAASSDRSPNETESRQA-----RSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFD 580
Query: 586 IQGQLRPR-DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
I G+L +KW V++TDDE DMML GDD W EFC+MVK+I+IYS EE K++ +K
Sbjct: 581 IPGELSASLNKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSLTPKAK 637
>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 699
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 351/701 (50%), Positives = 443/701 (63%), Gaps = 78/701 (11%)
Query: 12 LSSQG-GPGSGD--LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQ 67
+SSQG G G GD L+ ELW+ACAGPLVEVP+ ERV+YF QGH+EQL+ T+ L Q
Sbjct: 1 MSSQGAGGGVGDPELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQ 60
Query: 68 EPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQ-TEPRSPDQCLPEPPKQTVH 126
+F +P KILC+VV++EL AE ETDEV+AQITL P+ DQ P PD LPE P+ VH
Sbjct: 61 IKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVH 120
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SFCKILT SDTSTHGGFSVLR+HA ECLPPLDM++ATPTQEL KDLHG EWRFKHI+RG
Sbjct: 121 SFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRG 180
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWSTFVTSK+L++GDAFV+LR E GE RVGVRRL +QS+MP+SVISSQSM
Sbjct: 181 QPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSM 240
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
HLGVLA+A+HA+KT+++F+VYY+PR SQ+I+ +NKYL A F+VGMRFKM FEGED
Sbjct: 241 HLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGED 300
Query: 305 SPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP-LN 363
P ++F+GTIVG GD S QW GS+W+SLK+QWDE V PERVSPWEIE +AP +N
Sbjct: 301 VPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAIN 360
Query: 364 LA-QPAVKSKRPR----SIDIPA--SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRP 416
+ Q A K+KRPR +ID+ + A FW G Q H+ T + + S QVV P
Sbjct: 361 VPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIGSSEPNCISGHQVVWP 420
Query: 417 MRQK---EIDSTIINNNSTDDHRIVAAQSVLSGYASSGR---PGNTVIHEEVERGKKSEA 470
+ S++ N + +S L + SS + P + I +++ + +EA
Sbjct: 421 GEHPGYGAVSSSVCQNP-------LVLESWLKDFNSSNKGVSPTLSEISQKIFQVTSNEA 473
Query: 471 SLGCWLFGIDL-------KHNSNTA---------APLGRKVV------------------ 496
+ W K +SNTA AP KVV
Sbjct: 474 RIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMK 533
Query: 497 ---------DPTTGTSGVKGSARAASDFDASQNQDLKEVKRG--MADVSRKETQNKQGSA 545
D ++ +G + S D+ Q +V + AD S +E Q+ Q
Sbjct: 534 CTSISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQNYT 593
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEG 605
A RTR KVQM G AVGRAVDL L GY+ L +ELE+MF I+ + KW V FTDDEG
Sbjct: 594 A--RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKDL---KQKWKVAFTDDEG 648
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
D M GDD W EFC+MV+KI +Y E+ K + K ++S+
Sbjct: 649 DTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKLLSSA 689
>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
Length = 672
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 338/639 (52%), Positives = 424/639 (66%), Gaps = 39/639 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV +PR GERVYYFPQGH+EQLEAS +Q L HQ P FDLPSKILC+V
Sbjct: 19 LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSKILCKVA 78
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
++ AE +TDEVYAQITL PE DQ+E SPD L EP + VHSFCK LTASDTSTHGG
Sbjct: 79 SVQRKAEPDTDEVYAQITLVPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTHGG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSVLR+HA +CLPPLDMT P QEL A DLHG EW F+HI RGQPRRHLLTTGWS FV+
Sbjct: 139 FSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRHLLTTGWSVFVS 198
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGDA +FLRG NG+LRVGVRRL QQ++MPSSVISS S+ LGVLATA++A+ T +
Sbjct: 199 SKKLVAGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILGVLATASYALSTRS 258
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV-GD 319
+F ++YKPRT S+FI+ +NKYLEA H SVGMRFKMRFEGE+ PERRF+GTIVGV D
Sbjct: 259 MFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEAD 318
Query: 320 FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDI 379
S W S+WRSLK+QWDEP+++ RP+RVSPWE+EP VA++ +++QPA ++KR R +
Sbjct: 319 KSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPAQRNKRARPPVL 378
Query: 380 PASASAFWYQGSTQS--HDITQVVGATEGQSSE--SQVVRPMRQKEIDSTIINNNSTDDH 435
P+ +S G +S A GQ S S +P +S + NS+
Sbjct: 379 PSPSSDLSSLGIWKSPVESPFSYCDAQRGQPSPKLSSTAKP------NSVGFSGNSSLAA 432
Query: 436 RIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKV 495
+++ + + V+++E K+ + GC LFGI L N N
Sbjct: 433 VSSSSKYWPNRVENVTESVAPVVNKESSERKQGTGN-GCRLFGIQLIDNINMEE------ 485
Query: 496 VDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV------------SRKETQNKQG 543
P SG + + DA+ +Q +D+ S +E+Q+KQ
Sbjct: 486 NSPLATISGTGVNDQPLHSLDANSDQQSDPANLNQSDLPSISCEPEKCLRSPQESQSKQ- 544
Query: 544 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTD 602
R+ TKV MQG+AVGRAVDLT Y+DL +LE MF+I+GQL K W VV+TD
Sbjct: 545 ----IRSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKNWQVVYTD 600
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
DE DMM+ GDD W EFC MV+KI IY++EEV+ ++ K
Sbjct: 601 DEDDMMMVGDDPWNEFCSMVRKI-IYTSEEVRKLSPKIK 638
>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
Length = 695
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 346/694 (49%), Positives = 438/694 (63%), Gaps = 75/694 (10%)
Query: 16 GGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQEPLFDLP 74
GG G +L+ ELW+ACAGPLVEVP+ ERV+YF QGH+EQL+ T+ L Q +F +P
Sbjct: 4 GGVGDPELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVP 63
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHPETDQ-TEPRSPDQCLPEPPKQTVHSFCKILT 133
KILC+VV++EL AE ETDEV+AQITL P+ DQ P PD LPE P+ VHSFCKILT
Sbjct: 64 YKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILT 123
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
SDTSTHGGFSVLR+HA ECLPPLDM++ATPTQEL KDLHG EWRFKHI+RGQPRRHLL
Sbjct: 124 PSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLL 183
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWSTFVTSK+L++GDAFV+LR E GE RVGVRRL +QS+MP+SVISSQSMHLGVLA+
Sbjct: 184 TTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 243
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A+HA+KT+++F+VYY+PR SQ+I+ +NKYL A F+VGMRFKM FEGED P ++F+
Sbjct: 244 ASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFS 303
Query: 312 GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP-LNLA-QPAV 369
GTIVG GD S QW GS+W+SLK+QWDE V PERVSPWEIE +AP +N+ Q A
Sbjct: 304 GTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQSAT 363
Query: 370 KSKRPR----SIDIPA--SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQK--- 420
K+KRPR +ID+ + A FW G Q H+ T + + S QVV P
Sbjct: 364 KNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIGSSEPNCISGHQVVWPGEHPGYG 423
Query: 421 EIDSTIINNNSTDDHRIVAAQSVLSGYASSGR---PGNTVIHEEVERGKKSEASLGCWLF 477
+ S++ N + +S L + SS + P + I +++ + +EA + W
Sbjct: 424 AVSSSVCQNP-------LVLESWLKDFNSSNKGVSPTLSEISQKIFQVTSNEARIATWPA 476
Query: 478 GIDL-------KHNSNTA---------APLGRKVV------------------------- 496
K +SNTA AP KVV
Sbjct: 477 RSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMKCTSISTT 536
Query: 497 --DPTTGTSGVKGSARAASDFDASQNQDLKEVKRG--MADVSRKETQNKQGSAASTRTRT 552
D ++ +G + S D+ Q +V + AD S +E Q+ Q A RTR
Sbjct: 537 TDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQNYTA--RTRI 594
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KVQM G AVGRAVDL L GY+ L +ELE+MF I+ + KW V FTDDEGD M GD
Sbjct: 595 KVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKDL---KQKWKVAFTDDEGDTMEVGD 651
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
D W EFC+MV+KI +Y E+ K + K ++S+
Sbjct: 652 DPWLEFCQMVRKIVLYPIEDEKKIEPHPKLLSSA 685
>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
Length = 699
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 350/701 (49%), Positives = 442/701 (63%), Gaps = 78/701 (11%)
Query: 12 LSSQG-GPGSGD--LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQ 67
+SSQG G G GD L+ LW+ACAGPLVEVP+ ERV+YF QGH+EQL+ T+ L Q
Sbjct: 1 MSSQGAGGGVGDPELFAVLWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQ 60
Query: 68 EPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQ-TEPRSPDQCLPEPPKQTVH 126
+F +P KILC+VV++EL AE ETDEV+AQITL P+ DQ P PD LPE P+ VH
Sbjct: 61 IKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVH 120
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SFCKILT SDTSTHGGFSVLR+HA ECLPPLDM++ATPTQEL KDLHG EWRFKHI+RG
Sbjct: 121 SFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRG 180
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWSTFVTSK+L++GDAFV+LR E GE RVGVRRL +QS+MP+SVISSQSM
Sbjct: 181 QPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSM 240
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
HLGVLA+A+HA+KT+++F+VYY+PR SQ+I+ +NKYL A F+VGMRFKM FEGED
Sbjct: 241 HLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGED 300
Query: 305 SPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP-LN 363
P ++F+GTIVG GD S QW GS+W+SLK+QWDE V PERVSPWEIE +AP +N
Sbjct: 301 VPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAIN 360
Query: 364 LA-QPAVKSKRPR----SIDIPA--SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRP 416
+ Q A K+KRPR +ID+ + A FW G Q H+ T + + S QVV P
Sbjct: 361 VPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIGSSEPNCISGHQVVWP 420
Query: 417 MRQK---EIDSTIINNNSTDDHRIVAAQSVLSGYASSGR---PGNTVIHEEVERGKKSEA 470
+ S++ N + +S L + SS + P + I +++ + +EA
Sbjct: 421 GEHPGYGAVSSSVCQNP-------LVLESWLKDFNSSNKGVSPTLSEISQKIFQVTSNEA 473
Query: 471 SLGCWLFGIDL-------KHNSNTA---------APLGRKVV------------------ 496
+ W K +SNTA AP KVV
Sbjct: 474 RIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVEGKKEPAMFRLFGVDLMK 533
Query: 497 ---------DPTTGTSGVKGSARAASDFDASQNQDLKEVKRG--MADVSRKETQNKQGSA 545
D ++ +G + S D+ Q +V + AD S +E Q+ Q
Sbjct: 534 CTSISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQNYT 593
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEG 605
A RTR KVQM G AVGRAVDL L GY+ L +ELE+MF I+ + KW V FTDDEG
Sbjct: 594 A--RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKDL---KQKWKVAFTDDEG 648
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
D M GDD W EFC+MV+KI +Y E+ K + K ++S+
Sbjct: 649 DTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKLLSSA 689
>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
Length = 737
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 331/681 (48%), Positives = 422/681 (61%), Gaps = 78/681 (11%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VP+ G++V+YFPQGH EQ+E STNQ P +DLPSKILCRVV
Sbjct: 42 LYTELWHACAGPLVSVPQMGDKVFYFPQGHTEQVEKSTNQGADQPMPNYDLPSKILCRVV 101
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQT-VHSFCKILTASDTSTHG 141
++ L AE +TDEVYAQ+TL PE +Q E + + PP++ V+SFCK LTASDTSTHG
Sbjct: 102 NVWLKAEPDTDEVYAQLTLIPEPNQDETTLEKETVQSPPRRPHVYSFCKTLTASDTSTHG 161
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLP LDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLLTTGWS FV
Sbjct: 162 GFSVLRRHAEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLTTGWSAFV 221
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ++MP+SVISS SMHLGVLATA HA T
Sbjct: 222 SSKRLVAGDAFIFLRGENGELRVGVRRALRQQNNMPTSVISSHSMHLGVLATAMHAFSTG 281
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F V+Y+PRT S+F+I ++Y+E+V + +S+GMRF+MRFEGE++PE+RFTGTIVGV D
Sbjct: 282 TMFSVFYRPRTSPSEFVIPYDQYMESVKNNYSIGMRFRMRFEGEETPEQRFTGTIVGVED 341
Query: 320 F-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS-I 377
+ S +WP SKWR LK+QWDE ++V+RP RVSPW+IEP A +N P ++KRPR+ +
Sbjct: 342 YDSNRWPASKWRCLKVQWDEQSSVERPLRVSPWKIEPSAAPTAIN-PPPIPRAKRPRTNV 400
Query: 378 DIPASASAF----WYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTD 433
P+ S +G T+ + G +GQ + V P S+ NN +
Sbjct: 401 PSPSDVSHLSREGLPRGMTEHSQPPRYPGVLQGQEGMALVGGPF------SSGTNNPQSH 454
Query: 434 DHRIVAAQSVL-------------------------------SGYASSGRPGNTV---IH 459
+ A +L S +A PG +
Sbjct: 455 QKSSMWAPPLLPPKEDPYPHPPHPNWMSLLRSESPFTGKNPPSHWAPFPFPGEKAWPPLG 514
Query: 460 EEVERGKKSEASL-------GCWLFGIDLKHNSNTAAPLG---------RKVVDPTTGTS 503
+ G++ + L GC LFGI+L + A G ++VV T
Sbjct: 515 PALLVGREDQKPLGGGLQSGGCKLFGINLFEHQTEVASHGIAGFPSRGQQQVVLRTPPPV 574
Query: 504 GVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGR 563
G++G + ++ D D R Q + STR+ TKV MQG A+GR
Sbjct: 575 GLEGDQVSEQSKGGGKSADTG------GDTDRPLPHKAQ--STSTRSCTKVHMQGNALGR 626
Query: 564 AVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEF---C 619
+VDLT KGY DL EL++MF +G+L P W VV+TDDEGDMML GDD W + C
Sbjct: 627 SVDLTKFKGYKDLVAELDRMFGFEGELMDPMKGWQVVYTDDEGDMMLVGDDPWQRYREXC 686
Query: 620 KMVKKIFIYSTEEVKNMATSS 640
MV+KI+IY+ EEV+ M S
Sbjct: 687 VMVRKIYIYTREEVQRMRPRS 707
>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
Length = 405
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 278/383 (72%), Positives = 316/383 (82%), Gaps = 6/383 (1%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
G +L +ELW+ CAGPLV+VP+N ERVYYFPQGH+EQLEASTNQEL PLF+L KIL
Sbjct: 24 GEDELCQELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLFNLQPKIL 83
Query: 79 CRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
CRV+HI+LLAEQ++DEVYAQI L PE DQ EP SPD LPEPP+ VH FCK+LTASDTS
Sbjct: 84 CRVLHIQLLAEQDSDEVYAQIALLPEADQVEPTSPDLSLPEPPRPKVHFFCKVLTASDTS 143
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFS+LRKHA ECLPPLDMT ATP QEL AKDLHG+EW FKHIFRGQPRRHLLTTGWS
Sbjct: 144 THGGFSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLTTGWS 203
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
TFV+SKRLV GD+FVFLR GE+R+G+RRLA Q SSMP SVISSQSMHLGVLATA+HAV
Sbjct: 204 TFVSSKRLVTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGVLATASHAV 263
Query: 259 KTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
T T+F+VYYKPRTSQFIIGLNKYLEAV H +SVGMRFKM+FEGE+ PE+RFTGTIVGV
Sbjct: 264 TTQTMFVVYYKPRTSQFIIGLNKYLEAVKHRYSVGMRFKMKFEGEEIPEKRFTGTIVGVE 323
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP-AVKSKRPRSI 377
D S QW SKWRSLK+QWDEPA+V RP+RVSPW+IEPFVAS L P VK+KR R+
Sbjct: 324 DSSSQWKDSKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPPMGVKNKRHRAH 383
Query: 378 DIPASASAFWYQGSTQSHDITQV 400
+ P S+ G+ H++ V
Sbjct: 384 NEPKSSG-----GNKHIHNLWHV 401
>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 686
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/671 (47%), Positives = 428/671 (63%), Gaps = 65/671 (9%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQEPLFDLPSKILCR 80
+L+ ELW+ACAGPLVE+P+ ERV+YF QGH+EQL+ T+ L Q +F +P+KILC+
Sbjct: 11 ELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILCK 70
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTE-PRSPDQCLPEPPKQTVHSFCKILTASDTST 139
VV++EL AE ETDE+YAQITL PE DQ + P+ P+ L E + VHSFCKILT SDTST
Sbjct: 71 VVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTST 130
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSVLR+HA ECLP LDM++ TPTQEL KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 131 HGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 190
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FVTSK+L+AGDAFV+LR E G+ RVGVRRL +QS+MP+SVISSQSMHLGVLA+A+HA++
Sbjct: 191 FVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIR 250
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
T ++F+VYY+PR SQ+I+ LNKYLE+ F VGMRFKM FEG+D P ++F+GT+V
Sbjct: 251 THSIFLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVDK 310
Query: 318 GDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL--AQPAVKSKRPR 375
GD S QW GS+W++LK++WDE + PERVS WEIEPF ASAP QP++K+KRPR
Sbjct: 311 GDLSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPVQPSMKNKRPR 370
Query: 376 ----SIDIPA--SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
+DI A A FW G + H+ T V ++E + + + S+I N
Sbjct: 371 ETAEGLDIHALEPAQEFWLSGRPEQHEKTS-VSSSEPKHQVAWTSERAGYSAMSSSICQN 429
Query: 430 -----------NSTDDHRIV--AAQSVLSGYASSGR----PGNTVIHEEVERGKKSEASL 472
NS+ H + +Q + ++ R PG + H + K S +
Sbjct: 430 SAVTGSWFKGFNSSGSHPSLPEISQKLFQVTSNDARVPPWPGLSAYHADEPSSKLSCNTA 489
Query: 473 GC-------------------------WLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKG 507
C LFG++L +++ ++A D T+ +G +
Sbjct: 490 LCSYQTEEVAPRFSNAVEEEKKEPGMFRLFGVNLINHARSSA-----TADKTSVGAG-ET 543
Query: 508 SARAASDF-DASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVD 566
SARAA F D++Q + + M + S +E Q+ Q + S R+R KVQM G V RAVD
Sbjct: 544 SARAAGSFEDSAQLSRVTKDHTHMVNGSPREIQSHQ--SCSGRSRIKVQMHGNDVCRAVD 601
Query: 567 LTALKGYDDLFDELEKMFEIQG-QLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKI 625
L L GY+ L E+ +MFEI+ + +++W V F +DE + M G W EFC+MV+KI
Sbjct: 602 LGNLDGYEQLMGEVGEMFEIKDLGSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRKI 661
Query: 626 FIYSTEEVKNM 636
I+S + +M
Sbjct: 662 VIHSIGDRGHM 672
>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
Length = 686
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/678 (47%), Positives = 425/678 (62%), Gaps = 79/678 (11%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQEPLFDLPSKILCR 80
+L+ ELW+ACAGPLVE+P+ ERV+YF QGH+EQL+ T+ L Q +F +P+KILC+
Sbjct: 11 ELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILCK 70
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTE-PRSPDQCLPEPPKQTVHSFCKILTASDTST 139
VV++EL AE ETDE+YAQITL PE DQ + P+ P+ L E + VHSFCKILT SDTST
Sbjct: 71 VVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTST 130
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSVLR+HA ECLP LDM++ TPTQEL KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 131 HGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 190
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FVTSK+L+AGDAFV+LR E G+ RVGVRRL +QS+MP+SVISSQSMHLGVLA+A+HA++
Sbjct: 191 FVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIR 250
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
T ++F+VYY+PR SQ+I+ LNKYLE+ F VGMRFKM FEG+D P ++F+GT+V
Sbjct: 251 THSIFLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVDK 310
Query: 318 GDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL--AQPAVKSKRPR 375
GD S QW GS+W++LK++WDE + PERVS WEIEPF ASAP QP++K+KRPR
Sbjct: 311 GDLSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPVQPSMKNKRPR 370
Query: 376 ----SIDIPA--SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
+DI A A FW G + H+ T V ++E + + + S+I N
Sbjct: 371 ETAEGLDIHALEPAQEFWLSGRPEQHEKTS-VSSSEPKHQVAWTSERAGYSAMSSSICQN 429
Query: 430 NSTDDHRIVAAQSVLSGYASSGR------------------------PGNTVIHEEVERG 465
++ S G+ SSG PG + H +
Sbjct: 430 SAV-------TGSWFKGFNSSGSLPSLPEISQKLFQVTSNDARVPPWPGLSAYHADEPSS 482
Query: 466 KKSEASLGC-------------------------WLFGIDLKHNSNTAAPLGRKVVDPTT 500
K S + C LFG++L +++ ++A D T+
Sbjct: 483 KLSCNTALCSYQTEEVAPRFSNAVEEEKKEPGMFRLFGVNLINHARSSA-----TADKTS 537
Query: 501 GTSGVKGSARAASDF-DASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
+G + SARAA F D++Q + + M + S +E Q+ Q + S R+R KVQM G
Sbjct: 538 VGAG-ETSARAAGSFEDSAQLSRVTKDHTHMVNGSPREIQSHQ--SCSGRSRIKVQMHGN 594
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQG-QLRPRDKWAVVFTDDEGDMMLAGDDQWPEF 618
V RAVDL L GY+ L E+ +MFEI+ + +++W V F +DE + M G W EF
Sbjct: 595 DVCRAVDLGNLDGYEQLMGEVGEMFEIKDLGSKEKEEWKVTFINDENETMEVGAVPWQEF 654
Query: 619 CKMVKKIFIYSTEEVKNM 636
C+MV+KI I+S + +M
Sbjct: 655 CQMVRKIVIHSIGDRGHM 672
>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 514
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 300/566 (53%), Positives = 370/566 (65%), Gaps = 70/566 (12%)
Query: 102 HPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTL 161
H + EP S D L EP K TV SF KILTASDTSTHGGFSVLRKHATECLP LDMT
Sbjct: 11 HYNQKKIEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQ 70
Query: 162 ATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGE 221
TPTQEL A+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGE G+
Sbjct: 71 PTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGD 130
Query: 222 LRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNK 281
LRVGVRRLA QQS+MP+SVISSQSM LGVLATA+HAV T+T+F+V+YKPR SQFII +NK
Sbjct: 131 LRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNK 190
Query: 282 YLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPAT 341
Y+ A+ + FS+GMR++MRFEGE+SPER FTGTI+G GD S QWP SKWRSL+IQWDEP++
Sbjct: 191 YMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSS 250
Query: 342 VQRPERVSPWEIEPFVASA--PLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQ 399
+QRP +VSPWEIEPF SA P Q + KSKR R I++
Sbjct: 251 IQRPNKVSPWEIEPFSPSALTPTPTQQQS-KSKRSRP--------------------ISE 289
Query: 400 VVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIH 459
+ G+ S S + + H + +L ++ R N +
Sbjct: 290 ITGSPVASSFLS------------------SFSQSHESNPSVKLLFQDPATERNSNKSVF 331
Query: 460 EEVERGKKSEASL--GCWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFD 516
+ K +EA + C LFG DL +A P ++++
Sbjct: 332 SSGLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLI-------------------- 371
Query: 517 ASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDL 576
S + ++ + D + + +Q STR+R KVQMQG AVGRAVDLT L+ YD+L
Sbjct: 372 -SVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDEL 430
Query: 577 FDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
ELEKMFEI+G+L P+DKWA+VFTDDEGD ML GDD W EFCKM KK+FIY ++EVK M
Sbjct: 431 IKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 490
Query: 637 ATSSKPIASSVEGEGTAISLDSELKS 662
+ S + +GT ++L+S+ ++
Sbjct: 491 RSKSL-----LGDKGTIVNLESDQRT 511
>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
Length = 605
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 284/618 (45%), Positives = 392/618 (63%), Gaps = 44/618 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +EAST +EL +P+ D PSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E +DE YA+ITL P+T Q + +Q P V+SF K+LTASDTS HGG
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRP---LVNSFTKVLTASDTSVHGG 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV +KHA ECLPPLDM+ PTQE+ A DLHG +WRF+HI+RG +RHLLT GW+ F T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S +SM G++A+A HA
Sbjct: 201 SKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+ V++ F+VG RF MRFEG+D ERR GTI+GV DFS
Sbjct: 261 MFIVVYKPRSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSID-IP 380
W S+WRSL++QWDE A+ RP +VSPW+IE + N+++ + +K+KR R ++ I
Sbjct: 321 HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWS--NVSRSSFLKNKRSREVNEIG 378
Query: 381 ASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
+S+S TQ +I Q AT S +R ++ I ++ R++ +
Sbjct: 379 SSSSHLLPPTLTQGQEIGQQSMATPMNIS-------LRYRD-----ITEDAMTPSRLLMS 426
Query: 441 QSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTT 500
V + + +E + A LFG+ L S P+ + ++ +
Sbjct: 427 YPV----QPMAKLNYNNVVTPIEENITTNAVASFRLFGVSLATPSVIKDPVEQIGLEISR 482
Query: 501 GTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIA 560
T +E K G + + R T+ + +STRT TKVQMQG+
Sbjct: 483 LT---------------------QEKKFGQSQILRSPTEIQSKQFSSTRTCTKVQMQGVT 521
Query: 561 VGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCK 620
+GRAVDL+ L GYD L ELEK+F+++GQL+ R++W + FT++E D ML G+D WPEFC
Sbjct: 522 IGRAVDLSVLNGYDQLILELEKLFDLKGQLQARNQWEIAFTNNEEDKMLVGEDPWPEFCN 581
Query: 621 MVKKIFIYSTEEVKNMAT 638
MVKKIFIYS EEVKN+ +
Sbjct: 582 MVKKIFIYSKEEVKNLKS 599
>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 295/620 (47%), Positives = 394/620 (63%), Gaps = 44/620 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE VYYFPQG+IE ++AST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQT--EPRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
I L E +DE YA+ITL P+T Q +S +Q P V+SF K+LTASDTS +
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRP-----LVNSFTKVLTASDTSAY 138
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGF V +KHA ECLPPLDM+ P QEL AKDLHG +WRF+H +RG P+RH LTTGW+ F
Sbjct: 139 GGFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEF 198
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
TSK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S M GV+A+A HA+
Sbjct: 199 TTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDN 258
Query: 261 STLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+FIV YKPR+SQFI+ +K+L+A+++ F VG RF MRFEG+D ERR+ GTI+GV DF
Sbjct: 259 QCIFIVVYKPRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVNDF 318
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDI 379
S W S+WRSL++QWDE A+ RP +VSPWEIE +++ LN+ + + +K+KR R
Sbjct: 319 SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSA--LNVPRSSLLKNKRLRETLE 376
Query: 380 PASASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPMRQKEIDSTIINNNSTDDHRIV 438
Y S+ SH + ++ T+GQ + V PM ++++ ++T+D +
Sbjct: 377 YLLNILVLYTCSSSSHILPPIL--TQGQEIGQLSVASPM-----NTSLRYRDTTEDA--M 427
Query: 439 AAQSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKV 495
+L Y P N + ++E ++A LFG+ L A PL K
Sbjct: 428 NPSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKAVTNFRLFGVSL------AIPLVIK- 480
Query: 496 VDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQ 555
DP F Q+Q L+ S E Q+KQ STRT TKVQ
Sbjct: 481 -DPIEEIGSDISKLTEGKKF--GQSQTLR---------SPIEIQSKQ--FGSTRTCTKVQ 526
Query: 556 MQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
MQG+ +GRAVDL+ L GYD L ELEK+F+++GQL+ R++W + FTD +G ML GDD W
Sbjct: 527 MQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGDDPW 586
Query: 616 PEFCKMVKKIFIYSTEEVKN 635
PEFCKMVKKI IYS EEVKN
Sbjct: 587 PEFCKMVKKILIYSKEEVKN 606
>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 290/612 (47%), Positives = 384/612 (62%), Gaps = 47/612 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +EA T +EL +P+FDLPSK+ CRV+
Sbjct: 25 MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELIEAYTREELNKIQPIFDLPSKLQCRVI 84
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E+ +DE YA+ITL P+T P D + V+SF K+LTASDTS HGG
Sbjct: 85 AIQLKVEKNSDETYAEITLMPDTQVVIPTQNDNHY----RPLVNSFTKVLTASDTSVHGG 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV RK A ECLPPLDM+ P QEL DLHG +WRFKH +RG PRRHLLT+GW+ F T
Sbjct: 141 FSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTSGWNAFTT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGD VFLRGE GELRVG+RR HQQ ++ SS+IS SM GV+A+A HA
Sbjct: 201 SKKLVAGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDSMRHGVIASAVHAFNNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ NK+++AV++ F+VG RF MRFEGED ERR++GTI+GV +FS
Sbjct: 261 MFIVVYKPRSSQFIVSYNKFVDAVNNKFNVGSRFTMRFEGEDFSERRYSGTIIGVNNFSS 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDIPA 381
W S+WRSL+++WDE A+ RP++VSPW+IE S LN+ +P+ +K+KR R ++
Sbjct: 321 HWMESEWRSLEVKWDEFASFPRPDKVSPWDIEHLTPS--LNVLRPSLLKNKRSREVN--- 375
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
GST SH + ++ T+GQ E + PM I ++ T
Sbjct: 376 ------EIGSTSSHLLHPIL--TQGQEIGEPSMTSPMNVFLSYCDEIEDDET-------P 420
Query: 441 QSVLSGYASSGRP----GNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVV 496
+L Y P N + +E + A+ LFG+ L +S P+
Sbjct: 421 SRMLMSYHVPTMPKLNYNNDQMVTPIEENITTNANASFRLFGVSLATSSVIKDPIEPMES 480
Query: 497 DPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQM 556
P + S + K++ G S +E Q+KQ S STR+ TKVQM
Sbjct: 481 YPKSEISKLCQE---------------KKLGLGQTITSPREIQSKQFS--STRSCTKVQM 523
Query: 557 QGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWP 616
QG+ VGRA+DL L GYD L ELEK+F++ GQL+ R++W + F D+EG+ L GD+ WP
Sbjct: 524 QGVPVGRALDLNVLNGYDHLIIELEKLFDLNGQLQTRNQWKIAFKDNEGNEKLVGDNPWP 583
Query: 617 EFCKMVKKIFIY 628
EFC MVKKIFIY
Sbjct: 584 EFCSMVKKIFIY 595
>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
Length = 662
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 317/645 (49%), Positives = 401/645 (62%), Gaps = 74/645 (11%)
Query: 64 LTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQ-TEPRSPDQCLPEPPK 122
L Q +F +P KILC+VV++EL AE ETDEV+AQITL P+ DQ P PD LPE P+
Sbjct: 20 LAEQIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPR 79
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
VHSFCKILT SDTSTHGGFSVLR+HA ECLPPLDM++ATPTQEL KDLHG EWRFKH
Sbjct: 80 PVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKH 139
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS 242
I+RGQPRRHLLTTGWSTFVTSK+L++GDAFV+LR E GE RVGVRRL +QS+MP+SVIS
Sbjct: 140 IYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVIS 199
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRF 300
SQSMHLGVLA+A+HA+KT+++F+VYY+PR SQ+I+ +NKYL A F+VGMRFKM F
Sbjct: 200 SQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSF 259
Query: 301 EGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
EGED P ++F+GTIVG GD S QW GS+W+SLK+QWDE V PERVSPWEIE +A
Sbjct: 260 EGEDVPVKKFSGTIVGEGDLSLQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA 319
Query: 361 P-LNLA-QPAVKSKRPR----SIDIPA--SASAFWYQGSTQSHDITQVVGATEGQSSESQ 412
P +N+ Q A K+KRPR +ID+ + A FW G Q H+ T + + S Q
Sbjct: 320 PAINVPLQSATKNKRPREPSETIDLQSLEPAQEFWLSGMPQQHEKTGIGSSEPNCISGHQ 379
Query: 413 VVRPMRQK---EIDSTIINNNSTDDHRIVAAQSVLSGYASSGR---PGNTVIHEEVERGK 466
VV P + S++ N + +S L + SS + P + I +++ +
Sbjct: 380 VVWPGEHPGYGAVSSSVCQNP-------LVLESWLKDFNSSNKGVSPTLSEISQKIFQVT 432
Query: 467 KSEASLGCWLFGIDL-------KHNSNTA---------APLGRKVV-------------- 496
+EA + W K +SNTA AP KVV
Sbjct: 433 SNEARIATWPARSAYQAEEPTSKLSSNTAACGYRTEEVAPNASKVVEGKKEPAMFRLFGV 492
Query: 497 -------------DPTTGTSGVKGSARAASDFDASQNQDLKEVKRG--MADVSRKETQNK 541
D ++ +G + S D+ Q +V + AD S +E Q+
Sbjct: 493 DLMKCTSISTTTDDKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSH 552
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFT 601
Q A RTR KVQM G AVGRAVDL L GY+ L +ELE+MF I+ + KW V FT
Sbjct: 553 QNYTA--RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKDL---KQKWKVAFT 607
Query: 602 DDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
DDEGD M GDD W EFC+MV+KI +Y E+ K + K ++S+
Sbjct: 608 DDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKLLSSA 652
>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
Length = 606
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 291/622 (46%), Positives = 391/622 (62%), Gaps = 57/622 (9%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE VYYFPQG+IE ++AST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE+YA+ITL P+T Q + + P V+SF K+LTASDTS +GG
Sbjct: 84 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRP---LVNSFTKVLTASDTSAYGG 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV +KHA ECLPPLDM+ P QE+ A DLH +WRF+H +RG P+RH LTTGW+ F+T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFIT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S M GV+A+A HA
Sbjct: 201 SKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ GTI+GV DFS
Sbjct: 261 IFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDIPA 381
W S+WRSL++QWDE A+ RP +VSPWEIE V + LN+ + + +K+KR R ++
Sbjct: 321 HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPA--LNVPRSSLLKNKRLREVN--- 375
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPM----RQKEIDSTIINNNSTDDHR 436
F GS+ SH + ++ T+GQ + V PM R ++ +N
Sbjct: 376 ---EF---GSSSSHLLPPIL--TQGQEIGQLSVASPMNISLRYRDTTEAAMN-------- 419
Query: 437 IVAAQSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGR 493
+L Y P N + ++E ++A LFG+ L P+
Sbjct: 420 ---PSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKAGTNFRLFGVTLD-----TPPM-- 469
Query: 494 KVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTK 553
+ DP D S+ + K+ + S E Q+KQ S S+RT TK
Sbjct: 470 -IKDPIKQIGS-----------DISKLTERKKFGQSQTLRSPIEIQSKQFS--SSRTCTK 515
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDD 613
VQMQG+ +GRAVDL+ L GYD L ELEK+F+I+GQL+ R++W + FTD +G ML GDD
Sbjct: 516 VQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGDD 575
Query: 614 QWPEFCKMVKKIFIYSTEEVKN 635
WPEFCKMVKKI IYS EEVKN
Sbjct: 576 PWPEFCKMVKKILIYSKEEVKN 597
>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 285/622 (45%), Positives = 397/622 (63%), Gaps = 44/622 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE +YYFPQGHIE +EAST EL P FDLPSK+ C V
Sbjct: 24 MYEQLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHFDLPSKLRCCVD 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L +Q TD+VYA+I L P+T T+ +P + + + V+SF KILT+SD +THGG
Sbjct: 84 DIQLKIDQNTDDVYAEIYLMPDT--TDVITPITTM-DNQRPMVYSFSKILTSSDANTHGG 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
S+L++HATECLPPLDM+ TP Q L AKDLHG EW FKH FRG PRRHL T+GWS F T
Sbjct: 141 LSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFAT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
+KRL+ GDAFVFLRGENGEL VG+RR HQ PS VIS+Q M GV+A+ +A K+
Sbjct: 201 TKRLIVGDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVIASVVNAFKSKC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
FIV YKP +SQF++ +K+++A+++ F VG RF+MRFEG+D E+R++GTI+GV D S
Sbjct: 261 KFIVVYKPSSSQFVVNYDKFVDAMNNKFIVGSRFRMRFEGQDFSEKRYSGTIIGVNDMSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV-KSKRPRSIDIPA 381
W S+WRSL++QWDE + RP++VSPWEIE + S+ +++QP V + KR R +
Sbjct: 321 HWKDSEWRSLQVQWDELSPFPRPDKVSPWEIEHLIPSS--SISQPTVLQKKRARQCN--- 375
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQ 441
GST S+ +T G GQSS S P E ++ +D + +
Sbjct: 376 ------EIGSTSSNLLT---GQEIGQSSLSS---PKSVPEFSC----RDAVEDSKFPSDW 419
Query: 442 SVLSGYASSGRPGNTV--IHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPT 499
+ + +P N + ++ + +EA+ C LFG+DL S T P+G T
Sbjct: 420 LMSDLVPAIPKPNNNNNQLVQQTKEKITTEATTSCILFGVDLTKASKTKDPMGPIEATET 479
Query: 500 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
T + + +QD K++ + + S KE Q+ + + STR R KVQMQG+
Sbjct: 480 TTSCIL--------------SQD-KKLDQTLTWTSPKEVQSSKFN--STRRRIKVQMQGV 522
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFC 619
+GRAVDLT GY+ L +LE++F+++ +LR R++W +VF ++EG++M GDD WPEFC
Sbjct: 523 VIGRAVDLTVFHGYNQLIQKLEELFDLKDELRSRNQWEIVFINNEGNVMPLGDDPWPEFC 582
Query: 620 KMVKKIFIYSTEEVKNMATSSK 641
M KKIFI S EE++ M + +K
Sbjct: 583 NMAKKIFIGSKEEIEKMKSRNK 604
>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
Length = 620
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 295/637 (46%), Positives = 396/637 (62%), Gaps = 60/637 (9%)
Query: 10 CSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP 69
C S+ G S +Y +LWK CAGPL ++P+ GE VYYFPQG+IE ++AST +EL +P
Sbjct: 24 CFCSAVDGSKSY-MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP 82
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFC 129
+ DLPSK+ CRV+ I L E +DE+YA+ITL P+T Q + + P V+SF
Sbjct: 83 ICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRP---LVNSFT 139
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K+LTASDTS +GGFSV +KHA ECLPPLDM+ P QE+ A DLH +WRF+H +RG P+
Sbjct: 140 KVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQ 199
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RH LTTGW+ F+TSK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S M G
Sbjct: 200 RHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 259
Query: 250 VLATAAHAVKTSTLFIVYYKP--RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
V+A+A HA +FIV YKP R+SQFI+ +K+L+AV++ F+VG RF MRFEG+D E
Sbjct: 260 VIASAKHAFDNQCIFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSE 319
Query: 308 RRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
RR+ GTI+GV DFS W S+WRSL++QWDE A+ RP +VSPWEIE V + LN+ +
Sbjct: 320 RRYFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPA--LNVPRS 377
Query: 368 A-VKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPM----RQKE 421
+ +K+KR R ++ F GS+ SH + ++ T+GQ + V PM R ++
Sbjct: 378 SLLKNKRLREVN------EF---GSSSSHLLPPIL--TQGQEIGQLSVASPMNISLRYRD 426
Query: 422 IDSTIINNNSTDDHRIVAAQSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFG 478
+N +L Y P N + ++E ++A LFG
Sbjct: 427 TTEAAMN-----------PSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKAGTNFRLFG 475
Query: 479 IDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKET 538
+ L P+ + DP D S+ + K+ + S E
Sbjct: 476 VTLD-----TPPM---IKDPIKQIGS-----------DISKLTERKKFGQSQTLRSPIEI 516
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAV 598
Q+KQ S S+RT TKVQMQG+ +GRAVDL+ L GYD L ELEK+F+I+GQL+ R++W +
Sbjct: 517 QSKQFS--SSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKI 574
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKN 635
FTD +G ML GDD WPEFCKMVKKI IYS EEVKN
Sbjct: 575 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKN 611
>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
Length = 701
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 328/700 (46%), Positives = 428/700 (61%), Gaps = 83/700 (11%)
Query: 16 GGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE-LTHQEPLFDLP 74
GG +L+ ELW+ACAGPLVE+P+ G+RV+YF QGH+EQ++ ++Q+ L Q +F +P
Sbjct: 4 GGGRDAELFSELWRACAGPLVELPQPGQRVFYFLQGHLEQVQQPSDQKVLADQIKMFQVP 63
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHPETDQT-EPRSPDQCLPEPPKQTVHSFCKILT 133
KILCRVV++EL AE ET+EVYAQITL PE DQ P SPD LPE + VHSF KILT
Sbjct: 64 YKILCRVVNVELKAEVETEEVYAQITLLPEQDQEYLPSSPDPPLPEVRRPVVHSFSKILT 123
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
SDTSTHGGFSVLR+HA ECLPPLDM++ TPTQEL KD+ G EWRFKHI+RGQPRRHLL
Sbjct: 124 PSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHLL 183
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWSTFVTSK+LV GDAFV+LR E GE RVGVR ++++MPSSV+SSQSMHLGVLA+
Sbjct: 184 TTGWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHLGVLAS 243
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A+HA++T ++F+VYY+PR SQ+I+ +NKY ++VG+RFKM FEGE+ P ++F+
Sbjct: 244 ASHALQTKSIFLVYYRPRVSQSQYIVNVNKYFLTSKLRYTVGVRFKMSFEGEEVPVKKFS 303
Query: 312 GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---FVASAPLNLA-QP 367
GTIVG G S QW S+W+S K+QWD+PA PERVSPWEIEP +++ +N+ Q
Sbjct: 304 GTIVGDGALSPQWSCSEWKSKKVQWDDPANCNGPERVSPWEIEPADGAASASTINVPLQS 363
Query: 368 AVKSKRPR----SIDIPA---SASAFWYQGSTQSHDI--------------TQVVGATE- 405
++++KRPR +D+ + + F G + HD QV+ E
Sbjct: 364 SIRNKRPRETTEDLDLQSLNPTTQEFSLSGMPRQHDKIGDGPSNPNRMIPGNQVIWPGER 423
Query: 406 -------GQSSESQ--VVRPMRQKEID-------------STIINNNSTDDHRIVAAQSV 443
G SS Q +VR +E + S + + +D R A V
Sbjct: 424 AAGYSAVGSSSFCQKPLVRESWLEEFNLSRQAMSPTLSEISQKLYQVTRNDAR-AAPWPV 482
Query: 444 LSGYASSG----RPGNTVIH----EEV-----ERGKKSEASLGCWLFGIDL-KHNSNTAA 489
L Y + P NT +H EE + +KS+ LFG++L K S TA
Sbjct: 483 LPAYQAQQPALRLPCNTALHSYRTEEAAPSLPKVTEKSKEPGMVRLFGVNLMKPTSGTA- 541
Query: 490 PLGRKVVDPTTGTSGVKGSARAASDFDAS-QNQDLKEVKRG--MADVSRKETQNKQGSAA 546
G + SAR A + S Q L V + + + S +E Q+ Q A
Sbjct: 542 ------TADNAGAGAGETSARVAGPCEESGQVSALSRVTKDHKVVNESPREIQSNQSCIA 595
Query: 547 STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGD 606
R R KVQM G AVGRAVDL L GY+ L ELE+MF+I+ + + V F D++GD
Sbjct: 596 --RNRVKVQMHGNAVGRAVDLANLDGYEQLIRELEQMFDIKDI---KQNFKVAFADNDGD 650
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
M GDD W EFC+MVKKI IY EE K M PI+++
Sbjct: 651 TMKVGDDPWMEFCRMVKKIVIYPLEEEK-MEPHQTPISAA 689
>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
gi|238014618|gb|ACR38344.1| unknown [Zea mays]
gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
Length = 511
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 279/504 (55%), Positives = 342/504 (67%), Gaps = 59/504 (11%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
GCS G L+RELW ACAGPLV VPR GE VYYFPQGH+EQLEAST+Q+L
Sbjct: 8 GCS-----GSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHL 62
Query: 69 PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSF 128
PLFDLP KILC+VV++EL AE ++DEVYAQI L PE DQ+EP SPD PEP + V+SF
Sbjct: 63 PLFDLPPKILCKVVNVELRAETDSDEVYAQIMLQPEADQSEPTSPDSEPPEPERCNVYSF 122
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSVLR+HA ECLP LDMT P QEL AKDLHG EW F+HIFRGQP
Sbjct: 123 CKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQP 182
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLLTTGWS FV+SKRLVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS +MHL
Sbjct: 183 RRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHL 242
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
GVLATA+HA+ T TLF V+YKPRT S+F++ +NKYLEA +H SVGMRFKMRFEG++SP
Sbjct: 243 GVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESP 302
Query: 307 ERRFTGTIVGVGDF----SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
ERR +GTI+G+G + W S WRSL++QWDEP+ + RP+RVSPWE+EP A+ P
Sbjct: 303 ERRLSGTIIGLGSMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDATNP- 361
Query: 363 NLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV---RPMRQ 419
QP +++KR R PA S + ++ QV G + + +Q RP +
Sbjct: 362 QPPQPHLRNKRARP---PALLSI--------APELPQVFGFLKSPAEPAQAFSFSRPQQT 410
Query: 420 KEI----------------------DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTV 457
+E+ ST IN++ R Q+ Y++S
Sbjct: 411 QELYHSNPSSIFSSSLNVGFSSKNDRSTPINSHLYWTMR----QTRTESYSAS------- 459
Query: 458 IHEEVERGKKSEASLGCWLFGIDL 481
I++ K+ A+ GC LFGI++
Sbjct: 460 INKAPTEKKQESATSGCRLFGIEI 483
>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
Length = 593
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/610 (46%), Positives = 387/610 (63%), Gaps = 49/610 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQG+IE +EAST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE YA+ITL P+T Q + ++ P V+SF K+LTASD S +G
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTQVVIPTQNENQFRP---LVNSFTKVLTASDISANGV 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV +KHA ECLPPLDM+ P QEL A DLHG +W F+H +RG P+RHLLTTGW+ F T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S M GV+A+A HA
Sbjct: 201 SKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ GTI+GV +FS
Sbjct: 261 MFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSNFSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDIPA 381
W S WRSL++QWDE A+ RP +VSPWEIE + + LN+ + + +K+KR R ++
Sbjct: 321 HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPA--LNVPRSSFLKNKRLREVN--- 375
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
F GS+ SH + ++ T+GQ + V PM + +++ +T+D +
Sbjct: 376 ---EF---GSSSSHLLPPIL--TQGQEIGQLSVASPM-----NISLLYRETTEDA--MNP 420
Query: 441 QSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVD 497
+L Y P N + ++E ++A LFG+ L P+ + D
Sbjct: 421 SRLLMSYPVQPMPKRNYNNQMVTQIEENITTKAGTNFRLFGVSLATPPVIKDPIEQIGSD 480
Query: 498 PTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQ 557
+ T G K Q+Q L+ S + Q+KQ S STRT TKVQMQ
Sbjct: 481 ISKLTEGKK----------FGQSQTLR---------SPTKIQSKQFS--STRTCTKVQMQ 519
Query: 558 GIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPE 617
G+ +GRAVDL+ L GYD L ELEK+F+++GQL+ R++W ++FT + D ML GDD WPE
Sbjct: 520 GVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPE 579
Query: 618 FCKMVKKIFI 627
FC MVK+I+I
Sbjct: 580 FCNMVKRIYI 589
>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
Length = 590
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 290/621 (46%), Positives = 385/621 (61%), Gaps = 71/621 (11%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE VYYFPQG+IE ++AST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQT--EPRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
I L E +DE YA+ITL P+T Q +S +Q P V+SF K+LTASDTS +
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRP-----LVNSFTKVLTASDTSAY 138
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGF V +KHA ECLPPL + P QEL AKDLHG +WRF+H +RG P+RH LTTGW+ F
Sbjct: 139 GGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEF 194
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
TSK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S M GV+A+A HA+
Sbjct: 195 TTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDN 254
Query: 261 STLFIVYYKP--RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
+FIV YKP R+SQFI+ +K+L+A+++ F VG RF MRFEG+D ERR+ GTI+GV
Sbjct: 255 QCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVN 314
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSI 377
DFS W S+WRSL++QWDE A+ RP +VSPWEIE +++ LN+ + + +K+KR R +
Sbjct: 315 DFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSA--LNVPRSSLLKNKRLREV 372
Query: 378 DIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRI 437
+ G GQ S V PM ++++ ++T+D
Sbjct: 373 N---------------------EFGQEIGQLS---VASPM-----NTSLRYRDTTEDA-- 401
Query: 438 VAAQSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK 494
+ +L Y P N + ++E ++A LFG+ L A PL K
Sbjct: 402 MNPSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKAVTNFRLFGVSL------AIPLVIK 455
Query: 495 VVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKV 554
DP F Q+Q L+ S E Q+KQ STRT TKV
Sbjct: 456 --DPIEEIGSDISKLTEGKKF--GQSQTLR---------SPIEIQSKQ--FGSTRTCTKV 500
Query: 555 QMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQ 614
QMQG+ +GRAVDL+ L GYD L ELEK+F+++GQL+ R++W + FTD +G ML GDD
Sbjct: 501 QMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGDDP 560
Query: 615 WPEFCKMVKKIFIYSTEEVKN 635
WPEFCKMVKKI IYS EEVKN
Sbjct: 561 WPEFCKMVKKILIYSKEEVKN 581
>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
Length = 598
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/617 (45%), Positives = 389/617 (63%), Gaps = 58/617 (9%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQG+IE +EAST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTE-------PRSPDQCLPEPPKQTVHSFCKILTAS 135
I L E +DE YA+ITL P+T +E ++ +Q P V+SF K+LTAS
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRP-----LVNSFTKVLTAS 138
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
D S +G FSV +KHA ECLPPLDM+ P QEL A DLHG +W F+H +RG P+RHLLTT
Sbjct: 139 DISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTT 198
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GW+ F TSK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S M GV+A+A
Sbjct: 199 GWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAK 258
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
HA +FIV YKPR+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ GTI+
Sbjct: 259 HAFDNQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTII 318
Query: 316 GVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRP 374
GV +FS W S WRSL++QWDE A+ RP +VSPWEIE + + LN+ + + +K+KR
Sbjct: 319 GVSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPA--LNVPRSSFLKNKRL 376
Query: 375 RSIDIPASASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPMRQKEIDSTIINNNSTD 433
R ++ F GS+ SH + ++ T+GQ + V PM + +++ +T+
Sbjct: 377 REVN------EF---GSSSSHLLPPIL--TQGQEIGQLSVASPM-----NISLLYRETTE 420
Query: 434 DHRIVAAQSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAP 490
D + +L Y P N + ++E ++A LFG+ L P
Sbjct: 421 DA--MNPSRLLMSYPVQPMPKRNYNNQMVTQIEENITTKAGTNFRLFGVSLATPPVIKDP 478
Query: 491 LGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT 550
+ + D + T G K Q+Q L+ S + Q+KQ S STRT
Sbjct: 479 IEQIGSDISKLTEGKK----------FGQSQTLR---------SPTKIQSKQFS--STRT 517
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLA 610
TKVQMQG+ +GRAVDL+ L GYD L ELEK+F+++GQL+ R++W ++FT + D ML
Sbjct: 518 CTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLV 577
Query: 611 GDDQWPEFCKMVKKIFI 627
GDD WPEFC MVK+I+I
Sbjct: 578 GDDPWPEFCNMVKRIYI 594
>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
Length = 598
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 286/611 (46%), Positives = 392/611 (64%), Gaps = 51/611 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE++YYFPQG+IE +EAST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E +DE YA+ITL P+T Q + ++ P V+SF K+LTASDTS GG
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP---LVNSFTKVLTASDTS--GG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
F V +KHA ECLPPLDM+ PTQEL A DLHG +WRF H +RG P+RHLLTTGW+ F T
Sbjct: 139 FFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTT 198
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGD VF+RGE GELRVG+RR HQQ ++PSS+IS +SM GV+A+A HA
Sbjct: 199 SKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQC 258
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ GTI+GV DFS
Sbjct: 259 MFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSP 318
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDIPA 381
W S+WR+L++QWDE A+ RP +VSPWEIE + + LN+ +P+ +K+KR R ++
Sbjct: 319 HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPA--LNVPRPSLLKNKRLREVN--- 373
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
GS+ SH + ++ T+GQ + V PM + ++ ++T+D ++
Sbjct: 374 ------EIGSSSSHLLPPIL--TQGQEIGQLSVASPM-----NISLTYRDTTED--VMNP 418
Query: 441 QSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVD 497
+L Y P N + ++E ++ LFG+ L S P+ +
Sbjct: 419 SRLLMSYPVQPMPKLNYNNQMVTQIEENITTKTGTNFRLFGVSLVTPSVIKDPIEEIGSE 478
Query: 498 PTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQ 557
+ T G K Q+Q L+ S E Q+KQ S STRT TKVQMQ
Sbjct: 479 ISKLTEGKK----------FGQSQTLR---------SPTEIQSKQFS--STRTCTKVQMQ 517
Query: 558 GIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPE 617
G+ + RAVDL+ L GYD L ELE++F+++GQL+ R++W + FTD + D ML GDD WPE
Sbjct: 518 GVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQWEIAFTDSDDDKMLVGDDPWPE 577
Query: 618 FCKMVKKIFIY 628
FC MVKKI I+
Sbjct: 578 FCNMVKKILIF 588
>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
Length = 601
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/616 (47%), Positives = 390/616 (63%), Gaps = 41/616 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +EAST ++L +P+ DLPSK+ CRV+
Sbjct: 25 MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLNELQPIVDLPSKLQCRVI 84
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E+ +DE YA+ITL P T Q + ++ P V+SF K+LTASDTS HGG
Sbjct: 85 TIQLKVERNSDETYAEITLMPYTTQVVIPTQNENQFRP---LVNSFTKVLTASDTSAHGG 141
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV RK A ECLPPLDM+ P QEL DLHG +WRFKH +RG PRRHLLTTGW+ F+T
Sbjct: 142 FSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTGWNAFIT 201
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGD VFLRGE GELRVG+RR +QQ ++PSS+IS +SM GV+A+A HA
Sbjct: 202 SKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIESMRHGVIASAKHAFDNQC 261
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+A+++ F+VG RF RFE +D ERR+ GTI+GV DFS
Sbjct: 262 MFIVVYKPRSSQFIVNYDKFLDAMNNKFNVGSRFTKRFEEDDFSERRYFGTIIGVIDFSP 321
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPAS 382
W S+WRSLK DE A+ RP++VSPWEIE S+ + L +K+K R
Sbjct: 322 HWKCSEWRSLK---DEFASFPRPDKVSPWEIEYSTPSSNV-LRLSMLKNKCSRE------ 371
Query: 383 ASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQ 441
F GS+ SH + ++ T+GQ + + PM I +NST R++ +
Sbjct: 372 ---FNEIGSSSSHLLPPIL--TQGQEIGQPSMTSPMNVPLSYRDAIEDNSTPS-RLLMSY 425
Query: 442 SVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTG 501
SV + + + ++ +E + C +FG+ L P+ + P +
Sbjct: 426 SVQT-MSRLNYNNDQMVTPIIEGNITNNGGASCRVFGVSLATPPVIKDPIEQMDSYPNSE 484
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADV-SRKETQNKQGSAASTRTRTKVQMQGIA 560
S + +E K G+ + S +E Q+KQ S STRT TKVQM G+A
Sbjct: 485 ISKLS-----------------QEKKFGLGQMRSPREIQSKQLS--STRTCTKVQMHGVA 525
Query: 561 VGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCK 620
+GRA+DL+ L GYD L ELEK+F+++GQL+ R++W + F D+E D ML GDD WPEFC
Sbjct: 526 LGRALDLSVLNGYDQLILELEKLFDLKGQLQNRNQWEIAFKDNEEDEMLVGDDPWPEFCN 585
Query: 621 MVKKIFIYSTEEVKNM 636
MVKKI IYS EEVKN
Sbjct: 586 MVKKIIIYSNEEVKNF 601
>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
Length = 593
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 281/610 (46%), Positives = 377/610 (61%), Gaps = 49/610 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +E ST +EL +P+ DLPSK+ CRV+
Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE YA+ITL P+T Q + ++ P V+SF K+LTASDTS HGG
Sbjct: 84 AIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP---LVNSFTKVLTASDTSAHGG 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
F V +KHA ECLP LDM+ P QEL A DLHG +WRF H +RG P+RHLLTTGW+ F T
Sbjct: 141 FFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGD VF+RGE GELRVG+RR HQQ ++PSS++S M GV+A+A HA
Sbjct: 201 SKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+F V YKPR+S+FI+ +K+L+AV++ F+VG RF MR EG+D ERR GTI+GV DFS
Sbjct: 261 MFTVVYKPRSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP-AVKSKRPRSIDIPA 381
W S+WRSL++QWDE + P++VSPW+IE + + +N+ + +K+KR R ++
Sbjct: 321 HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPA--INVPRSFLLKNKRLREVN--- 375
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQSSES-QVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
GS+ SH + ++ T+GQ +E V PM + ++ ++T+D +
Sbjct: 376 ------EIGSSSSHLLPPIL--TQGQENEQLSVASPM-----NISLRYRDATED--AMNP 420
Query: 441 QSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVD 497
+L Y P N + E+E ++ LFG+ L P+ + D
Sbjct: 421 SKLLMSYPVQPMPKLNYNNQMVTEMEENITTKTGTNFRLFGVTLD-----TPPV---IKD 472
Query: 498 PTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQ 557
P F SQ S E QNKQ S S+RT TKVQMQ
Sbjct: 473 PIEEIGSEISKLTEGKKFGLSQTLR-----------SPTEIQNKQFS--SSRTCTKVQMQ 519
Query: 558 GIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPE 617
G+ +GRAVDL+ L GYD L ELEK+F+I+GQL+ R++W + FTD + D ML GDD WPE
Sbjct: 520 GVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGDDPWPE 579
Query: 618 FCKMVKKIFI 627
FC MVKKIFI
Sbjct: 580 FCNMVKKIFI 589
>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/428 (58%), Positives = 324/428 (75%), Gaps = 14/428 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQC-LPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + LP PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ +
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEE 357
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+WP SKWRSLK++WDE +++ RP+RVSPW++EP +A L+ P + KRPRS
Sbjct: 358 SDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPV-PMPRPKRPRSNI 416
Query: 379 IPAS--ASAFWYQGSTQSH-------DITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
P+S +S +G+T+++ +++V+ E + ++ + +++++
Sbjct: 417 APSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQ 476
Query: 430 NSTDDHRI 437
+S DD ++
Sbjct: 477 SSADDDKV 484
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFD 516
I EE + ++ C LFGI L +N N D T A +
Sbjct: 641 TIQEETAKSREG----NCRLFGIPLTNNMNG--------TDSTMSQRNNLNDAAGLTQIA 688
Query: 517 ASQNQDLKEVKRGMADVSRKETQNK------------QGSAASTRTRTKVQMQGIAVGRA 564
+ + QDL + +G + Q + Q S+R+ TKV QGIA+GR+
Sbjct: 689 SPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRS 748
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
VDL+ + Y++L EL+++FE G+L P+ W +V+TD+E DMML GDD W EFC MV+
Sbjct: 749 VDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVR 808
Query: 624 KIFIYSTEEVKNM---ATSSKPIASSVEGEGT 652
KIFIY+ EEV+ M S + +V GEG+
Sbjct: 809 KIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGS 840
>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
protein; Short=ARF1-BP; AltName: Full=Protein
MEGAINTEGUMENTA
gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 859
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/428 (58%), Positives = 324/428 (75%), Gaps = 14/428 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQC-LPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + LP PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ +
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEE 357
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+WP SKWRSLK++WDE +++ RP+RVSPW++EP +A L+ P + KRPRS
Sbjct: 358 SDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPV-PMPRPKRPRSNI 416
Query: 379 IPAS--ASAFWYQGSTQSH-------DITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
P+S +S +G+T+++ +++V+ E + ++ + +++++
Sbjct: 417 APSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQ 476
Query: 430 NSTDDHRI 437
+S DD ++
Sbjct: 477 SSADDDKV 484
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFD 516
I EE + ++ C LFGI L +N N D T A +
Sbjct: 641 TIQEETAKSREG----NCRLFGIPLTNNMNG--------TDSTMSQRNNLNDAAGLTQIA 688
Query: 517 ASQNQDLKEVKRGMADVSRKETQNK------------QGSAASTRTRTKVQMQGIAVGRA 564
+ + QDL + +G + Q + Q S+R+ TKV QGIA+GR+
Sbjct: 689 SPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRS 748
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
VDL+ + Y++L EL+++FE G+L P+ W +V+TD+E DMML GDD W EFC MV+
Sbjct: 749 VDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVR 808
Query: 624 KIFIYSTEEVKNM---ATSSKPIASSVEGEGT 652
KIFIY+ EEV+ M S + +V GEG+
Sbjct: 809 KIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGS 840
>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/428 (58%), Positives = 324/428 (75%), Gaps = 14/428 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQC-LPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + LP PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ +
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEE 357
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+WP SKWRSLK++WDE +++ RP+RVSPW++EP +A L+ P + KRPRS
Sbjct: 358 SDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPV-PMPRPKRPRSNI 416
Query: 379 IPAS--ASAFWYQGSTQSH-------DITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
P+S +S +G+T+++ +++V+ E + ++ + +++++
Sbjct: 417 APSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQ 476
Query: 430 NSTDDHRI 437
+S DD ++
Sbjct: 477 SSADDDKV 484
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFD 516
I EE + ++ C LFGI L +N N D T A +
Sbjct: 641 TIQEETAKSREG----NCRLFGIPLTNNMNG--------TDSTMSQRNNLNDAAGLTQIA 688
Query: 517 ASQNQDLKEVKRGMADVSRKETQNK------------QGSAASTRTRTKVQMQGIAVGRA 564
+ + QDL + +G + Q + Q S+R+ TKV QGIA+GR+
Sbjct: 689 SPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRS 748
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
VDL+ + Y++L EL+++FE G+L P+ W +V+TD+E DMML GDD W EFC MV+
Sbjct: 749 VDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVR 808
Query: 624 KIFIYSTEEVKNM---ATSSKPIASSVEGEGT 652
KIFIY+ EEV+ M S + +V GEG+
Sbjct: 809 KIFIYTKEEVRKMNPGTVSCRSEEEAVVGEGS 840
>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 853
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/428 (58%), Positives = 324/428 (75%), Gaps = 14/428 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQC-LPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + LP PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ +
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEE 357
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+WP SKWRSLK++WDE +++ RP+RVSPW++EP +A L+ P + KRPRS
Sbjct: 358 SDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPV-PMPRPKRPRSNI 416
Query: 379 IPAS--ASAFWYQGSTQSH-------DITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
P+S +S +G+T+++ +++V+ E + ++ + +++++
Sbjct: 417 APSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQ 476
Query: 430 NSTDDHRI 437
+S DD ++
Sbjct: 477 SSADDDKV 484
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 100/193 (51%), Gaps = 25/193 (12%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFD 516
I EE + ++ C LFGI L +N N D T A +
Sbjct: 641 TIQEETAKSREG----NCRLFGIPLTNNMNG--------TDSTMSQRNNLNDAAGLTQIA 688
Query: 517 ASQNQDLKEVKRGMADVSRKETQNK------------QGSAASTRTRTKVQMQGIAVGRA 564
+ + QDL + +G + Q + Q S+R+ TKV QGIA+GR+
Sbjct: 689 SPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRS 748
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
VDL+ + Y++L EL+++FE G+L P+ W +V+TD+E DMML GDD W EFC MV+
Sbjct: 749 VDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVR 808
Query: 624 KIFIYSTEEVKNM 636
KIFIY+ EEV+ M
Sbjct: 809 KIFIYTKEEVRKM 821
>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
Length = 661
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/360 (68%), Positives = 285/360 (79%), Gaps = 7/360 (1%)
Query: 6 PNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELT 65
PN + S G P S LYRELW ACAGPLV VPR GERVYYFPQGH+EQLEAST+Q+L
Sbjct: 8 PNPAAAAGSGGMP-SDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLD 66
Query: 66 HQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTV 125
P+F+LP KILC VV++EL AE ++DEVYAQI L PE DQ E S D EP K T
Sbjct: 67 QYLPMFNLPPKILCSVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDPEPQEPEKCTA 126
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
HSFCK LTASDTSTHGGFSVLR+HA ECLP LDM+L P QEL AKDLHG EW F+HIFR
Sbjct: 127 HSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEWHFRHIFR 186
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQP+RHLLTTGWS FV+SKRLVAGDAF+F+RGENGELRVGVRRL Q +SMPSSVISS S
Sbjct: 187 GQPKRHLLTTGWSVFVSSKRLVAGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHS 246
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGE 303
MHLGVLATA+HA+ T TLF V+YKPRTS+ FI+ +NKYLEA SVGMRFKMRFEG+
Sbjct: 247 MHLGVLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGD 306
Query: 304 DSPERRFTGTIVGVGDFSEQ----WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
++PERRF+GTI+G+G W S WRSLK+QWDEP+++ RP+R+SPWE+EP A+
Sbjct: 307 EAPERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDAA 366
>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
Length = 678
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/428 (58%), Positives = 324/428 (75%), Gaps = 14/428 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQC-LPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + LP PP+ VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ +
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEE 357
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+WP SKWRSLK++WDE +++ RP+RVSPW++EP +A L+ P + KRPRS
Sbjct: 358 SDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPV-PMPRPKRPRSNI 416
Query: 379 IPAS--ASAFWYQGSTQSH-------DITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
P+S +S +G+T+++ +++V+ E + ++ + +++++
Sbjct: 417 APSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQ 476
Query: 430 NSTDDHRI 437
+S DD ++
Sbjct: 477 SSADDDKV 484
>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
Length = 600
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 286/613 (46%), Positives = 392/613 (63%), Gaps = 53/613 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE++YYFPQG+IE +EAST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E +DE YA+ITL P+T Q + ++ P V+SF K+LTASDTS GG
Sbjct: 84 AIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRP---LVNSFTKVLTASDTS--GG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
F V +KHA ECLPPLDM+ PTQEL A DLHG +WRF H +RG P+RHLLTTGW+ F T
Sbjct: 139 FFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTT 198
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGD VF+RGE GELRVG+RR HQQ ++PSS+IS +SM GV+A+A HA
Sbjct: 199 SKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQC 258
Query: 263 LFIVYYKP--RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+FIV YKP R+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ GTI+GV DF
Sbjct: 259 MFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDF 318
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDI 379
S W S+WR+L++QWDE A+ RP +VSPWEIE + + LN+ +P+ +K+KR R ++
Sbjct: 319 SPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPA--LNVPRPSLLKNKRLREVN- 375
Query: 380 PASASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPMRQKEIDSTIINNNSTDDHRIV 438
GS+ SH + ++ T+GQ + V PM + ++ ++T+D ++
Sbjct: 376 --------EIGSSSSHLLPPIL--TQGQEIGQLSVASPM-----NISLTYRDTTED--VM 418
Query: 439 AAQSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKV 495
+L Y P N + ++E ++ LFG+ L S P+
Sbjct: 419 NPSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKTGTNFRLFGVSLVTPSVIKDPIEEIG 478
Query: 496 VDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQ 555
+ + T G K Q+Q L+ S E Q+KQ S STRT TKVQ
Sbjct: 479 SEISKLTEGKK----------FGQSQTLR---------SPTEIQSKQFS--STRTCTKVQ 517
Query: 556 MQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
MQG+ + RAVDL+ L GYD L ELE++F+++GQL+ R++W + FTD + D ML GDD W
Sbjct: 518 MQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQWEIAFTDSDDDKMLVGDDPW 577
Query: 616 PEFCKMVKKIFIY 628
PEFC MVKKI I+
Sbjct: 578 PEFCNMVKKILIF 590
>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
Length = 1673
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/404 (63%), Positives = 304/404 (75%), Gaps = 12/404 (2%)
Query: 16 GGPG--SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
GG G S L+RELW ACAGPLV VP+ GERVYYFPQGH+EQLEASTNQ+L P+F+L
Sbjct: 8 GGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNL 67
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILT 133
PSKILC VV++EL AE ++DEVYAQI L PE DQ+E S D L + K T HSFCK LT
Sbjct: 68 PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLT 127
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSVLR+HA ECLP LDM+ P QEL AKDLHG EW F+HIFRGQPRRHLL
Sbjct: 128 ASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLL 187
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV+SKRLVAGDAF+FLRGE+GELRVGVRRL Q ++MPSSVISS SMHLGVLAT
Sbjct: 188 TTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLAT 247
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A+HA+ T TLF V+YKPRT S+F++ +NKYLEA SVGMRFKMRFEG+++PERRF+
Sbjct: 248 ASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFS 307
Query: 312 GTIVGVGDFSEQ----WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
GTI+G+G W S W+SLK+QWDEP+ + RP+RVSPWE+EP AS P QP
Sbjct: 308 GTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNP-QPPQP 366
Query: 368 AVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSES 411
+++KR R PAS S + D Q+ + G S++
Sbjct: 367 PLRNKRARP---PASPSVVAELPPSFDVDSDQISQPSNGNKSDA 407
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 537 ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR-DK 595
E+Q++Q R+ TKV MQG+AVGRAVDLT L GY DL +LE+MF+IQG L P +
Sbjct: 418 ESQSRQ-----VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR 472
Query: 596 WAVVFTDDEGDMMLAGDDQWPEF 618
W VV+TDDE DMML GDD W +F
Sbjct: 473 WQVVYTDDEDDMMLVGDDPWEKF 495
>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
Length = 620
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 289/659 (43%), Positives = 390/659 (59%), Gaps = 94/659 (14%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE VYYFPQG+IE AST +EL +P+ DLPSK+ CRV+
Sbjct: 1 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIEL--ASTREELNELQPICDLPSKLQCRVI 58
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE+YA+ITL P+T Q + + P V+SF K+LTASDTS +GG
Sbjct: 59 AIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRP---LVNSFTKVLTASDTSAYGG 115
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV +KHA ECLPPLDM+ P QE+ A DLH +WRF+H +RG P+RH LTTGW+ F+T
Sbjct: 116 FSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFIT 175
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S M GV+A+A HA
Sbjct: 176 SKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQC 235
Query: 263 LFIVYYKP----------RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
+FIV YKP R+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ G
Sbjct: 236 IFIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFG 295
Query: 313 TIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKS 371
TI+GV DFS W S+WRSL++QWDE A+ RP +VSPWEIE V + LN+ + + +K+
Sbjct: 296 TIIGVSDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPA--LNVPRSSLLKN 353
Query: 372 KRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQS-SESQVVRPM----RQKEIDSTI 426
KR R ++ F GS+ SH + ++ T+GQ + V PM R ++
Sbjct: 354 KRLREVN------EF---GSSSSHLLPPIL--TQGQEIGQLSVASPMNISLRYRDTTEAA 402
Query: 427 INNNSTDDHRIVAAQSVLSGYASSGRPG---NTVIHEEVERGKKSEASLGCWLFGIDLKH 483
+N +L Y P N + ++E ++A LFG+ L
Sbjct: 403 MN-----------PSRLLMSYPVQPMPKLNYNNQMVTQIEENITTKAGTNFRLFGVTLDT 451
Query: 484 NSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQG 543
P+ + G+ K + R Q+Q L+ S E Q+KQ
Sbjct: 452 PPMIKDPIKQ------IGSDISKLTERKK----FGQSQTLR---------SPIEIQSKQF 492
Query: 544 SAASTRTRT---------------------------KVQMQGIAVGRAVDLTALKGYDDL 576
S++ T T+ +VQMQG+ +GRAVDL+ L GYD L
Sbjct: 493 SSSRTCTKVSIRSIYSYSLYMKLFLIVLNSHNLYMEQVQMQGVTIGRAVDLSVLNGYDQL 552
Query: 577 FDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKN 635
ELEK+F+I+GQL+ R++W + FTD +G ML GDD WPEFCKMVKKI IYS EEVKN
Sbjct: 553 ILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKN 611
>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
Length = 846
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/377 (66%), Positives = 303/377 (80%), Gaps = 7/377 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR GERVYYFPQGHIEQ+EASTNQ Q P++DLPSKILCRV+
Sbjct: 45 LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVI 104
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEV+AQ+TL PE++Q E + P PP+ VHSFCK LTASDTSTHG
Sbjct: 105 NVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 164
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQELAAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 165 GFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 224
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 225 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 284
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E++ + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 285 TMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 344
Query: 320 FSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
Q W SKWR LK++WDE +T+ RPERVSPW+IEP +A LN + P + KRPRS
Sbjct: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSPWKIEPALAPPALN-SLPMPRPKRPRSNM 403
Query: 379 IPAS--ASAFWYQGSTQ 393
+P+S +S +GS++
Sbjct: 404 LPSSPDSSVLTREGSSK 420
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 17/197 (8%)
Query: 471 SLGCWLFGIDLKHNSNTAAPL--GRKVVDPTTGT--------SGVKGSARAASDFDASQN 520
S C LFGI L N P+ R ++ G + S + S A N
Sbjct: 632 SKDCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSSKLADDN 691
Query: 521 QDLKEVKRGMADVSRKETQN--KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFD 578
Q E ++ + S+ T++ + STR+ TKVQ QGIA+GR+VDL+ YD+L
Sbjct: 692 QVFNEHEKP-SQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIA 750
Query: 579 ELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
EL+++FE G+L P+ W +V+TDDEGDMML GDD W EFC MV+KIFIY+ EEV M
Sbjct: 751 ELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMN 810
Query: 638 T---SSKPIASSVEGEG 651
+ SSK S + GEG
Sbjct: 811 SVSLSSKGEDSPMNGEG 827
>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 858
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/364 (67%), Positives = 293/364 (80%), Gaps = 5/364 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR GERV+YFPQGHIEQ+EASTNQ P++DLP KILCRV+
Sbjct: 54 LYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVI 113
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-PPKQTVHSFCKILTASDTSTHG 141
++ L AE +TDEV+AQ+TL PE +Q E + P PP+ VHSFCK LTASDTSTHG
Sbjct: 114 NVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAAPPRFHVHSFCKTLTASDTSTHG 173
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDMT PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 293
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRTS +FI+ ++Y+E++ + +++GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 294 TMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIED 353
Query: 320 F-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+++WP SKWRSLK++WDE + + RPERVS W+IEP +A LN P + KRPRS
Sbjct: 354 ADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALAPPALN-PLPMPRPKRPRSNV 412
Query: 379 IPAS 382
+P+S
Sbjct: 413 VPSS 416
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 461 EVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQN 520
EV + K S+ C LFGI L + P + P+ + ++ FD Q
Sbjct: 636 EVSKPKDSD----CKLFGISLLSSPIAPEPSVSQRNVPSEPVGHMHTTSHQQRAFDNDQK 691
Query: 521 QDLKEVKRG--------MADVSRKETQNKQ---------GSAASTRTRTKVQMQGIAVGR 563
E RG + D K Q Q + S R+ TKV +GIA+GR
Sbjct: 692 S---EHSRGGSKPADGLLIDDHEKVLQTSQTHLKDIQAKSHSGSARSCTKVHKKGIALGR 748
Query: 564 AVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMV 622
+VDLT Y +L EL+++FE G L P+ W +V+TD+EGDMML GDD W EF MV
Sbjct: 749 SVDLTKFSDYGELIAELDQLFEFGGLLTSPQKDWLIVYTDNEGDMMLVGDDPWQEFVAMV 808
Query: 623 KKIFIYSTEEVKNMA 637
+KI+IY EE++ M+
Sbjct: 809 RKIYIYPKEEIQKMS 823
>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
Length = 846
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/408 (62%), Positives = 308/408 (75%), Gaps = 16/408 (3%)
Query: 2 AYVEPNFGCSLSSQGGPGSGD---------LYRELWKACAGPLVEVPRNGERVYYFPQGH 52
Y EP+ G S+ G S LY ELW++CAGPLV VPR GE VYYFPQGH
Sbjct: 10 GYSEPSDGSRPVSETGRSSSGVGIVDADTALYTELWRSCAGPLVTVPREGELVYYFPQGH 69
Query: 53 IEQLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRS 112
IEQ+EASTNQ Q PL++LPSKILCRVV++ L AE +TDEVYAQ+TL PE +Q E
Sbjct: 70 IEQVEASTNQVADQQMPLYNLPSKILCRVVNVLLKAEPDTDEVYAQVTLMPEPNQDENAV 129
Query: 113 PDQCL-PEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAK 171
+ + P PP+ VHSFCK LTASDTSTHGGFSVLR+HA ECLP LDM+ PTQEL AK
Sbjct: 130 KKEPMRPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAK 189
Query: 172 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH 231
DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR
Sbjct: 190 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 249
Query: 232 QQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC 289
QQ + PSSVISS SMHLGVLATA HA++T T+F VYYKPRTS +FI+ + Y+E+V +
Sbjct: 250 QQGNAPSSVISSHSMHLGVLATAWHAIQTKTMFTVYYKPRTSPAEFIVPYDHYMESVKNN 309
Query: 290 FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERV 348
+S+GMRFKMRFEGE++PE+RFTGTIVG+ D Q W SKWR LK++WDE +++ RP+RV
Sbjct: 310 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWLESKWRCLKVRWDENSSIPRPDRV 369
Query: 349 SPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPAS--ASAFWYQGSTQS 394
SPW+IEP ++ LN+ P + KRPRS +P S +S +GS+++
Sbjct: 370 SPWKIEPALSPPALNVP-PVARPKRPRSSILPTSPDSSVLTREGSSRA 416
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 111/193 (57%), Gaps = 19/193 (9%)
Query: 476 LFGIDLKHNSNTAAPLGRK--VVDPTTGTS-GVKGSARAASDFDASQNQDL-KEVKRGMA 531
LFGI L N T A + RK ++DP + + G+ A+D D Q +V G+A
Sbjct: 633 LFGIPLTSNVCTDAVMMRKSSLIDPASDMNIGIHPHQSLATDSDQRSEQSKGSKVDDGVA 692
Query: 532 DVSRKET----------QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELE 581
+ ++ +G ++STR+ TKV QG A+GR+VDL YD+L EL+
Sbjct: 693 ANDHDKQFHTFHLAARDKDGKGHSSSTRSCTKVHKQGTALGRSVDLAKFNNYDELIAELD 752
Query: 582 KMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
++F+ G+L+ R K W VV+TDDEGDMML GDD W EFC MV+KIFIY+ EEV+ M
Sbjct: 753 QLFDFNGELKARSKSWLVVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVQRM---- 808
Query: 641 KPIASSVEGEGTA 653
P + +GE T+
Sbjct: 809 NPGTLNSKGEDTS 821
>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/428 (59%), Positives = 323/428 (75%), Gaps = 14/428 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 54 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 113
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + P PP + VHSFCK LTASDTSTHG
Sbjct: 114 NVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 173
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 293
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 294 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 353
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+WP SKWRSLK++WDE +++ RP+RVSPW+IEP +A L+ P + KRPRS
Sbjct: 354 SDITRWPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALAPPALSPV-PMPRPKRPRSNI 412
Query: 379 IPAS--ASAFWYQGSTQSH-------DITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
P+S +S +G+T+++ +++V+ E + ++ + +++++
Sbjct: 413 APSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDAPENSVVWQ 472
Query: 430 NSTDDHRI 437
+S DD ++
Sbjct: 473 SSADDDKV 480
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 106/211 (50%), Gaps = 27/211 (12%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFD 516
I EE + ++ C LFGI L +N N D A +
Sbjct: 641 TIQEETAKSREG----NCRLFGIPLSNNMNG--------TDSAMSQRSNLNDAAGLTQLA 688
Query: 517 ASQNQDLKEVKRGMADVSRKETQNK------------QGSAASTRTRTKVQMQGIAVGRA 564
+ + QDL + +G + Q + + S+R+ TKV QGIA+GR+
Sbjct: 689 SPKVQDLPDQSKGSKSTNDHREQGRPFQTNNPHPKDAHTKSNSSRSCTKVHKQGIALGRS 748
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
VDL+ + Y++L EL+++FE G+L P+ W +V+TDDE DMML GDD W EFC MV+
Sbjct: 749 VDLSKFQNYEELIAELDRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVR 808
Query: 624 KIFIYSTEEVKNM--ATSSKPIASSVEGEGT 652
KIFIY+ EEV+ M T S V GEG+
Sbjct: 809 KIFIYTKEEVRKMNPGTLSCRSEEGVVGEGS 839
>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
Length = 854
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/445 (58%), Positives = 330/445 (74%), Gaps = 16/445 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 117
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + P PP + VHSFCK LTASDTSTHG
Sbjct: 118 NVDLKAEADTDEVYAQITLLPEPNQDENVIEKETPPPPPPRFQVHSFCKTLTASDTSTHG 177
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 178 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 237
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 238 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 297
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 298 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 357
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W SKWRSLK++WDE +++ RP+RVSPW+IEP +A L+ P + KRPRS
Sbjct: 358 SDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALAPPALSPV-PMPRPKRPRSNI 416
Query: 379 IPAS--ASAFWYQGSTQSH-------DITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
P+S +S +GST+++ +++V+ E + ++ + +++++
Sbjct: 417 APSSPDSSMLQREGSTKANMDPLPASGLSRVLQGQEYSTLRTKHTESVECDVPENSVVWQ 476
Query: 430 NSTDDHR--IVAAQSVLSGYASSGR 452
+S DD + +V+A + SSGR
Sbjct: 477 SSADDDKVDVVSASRRCENWMSSGR 501
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 107/212 (50%), Gaps = 28/212 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFD 516
V+ EE + + C LFGI L +N N A D T A +
Sbjct: 636 VVQEETTKARDG----NCRLFGIPLVNNMNGA--------DSTMAQRNNLKDAAGLTQTA 683
Query: 517 ASQNQDLKEVKRGMADVSRKETQNK------------QGSAASTRTRTKVQMQGIAVGRA 564
+ QDL + +G + + Q + S+R+ TKV QGIA+GR+
Sbjct: 684 PPKVQDLSDQSKGSKSTNDQREQGRPFQTNHPHPKDAHTKTNSSRSCTKVHKQGIALGRS 743
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
VDL+ + Y++L EL+++FE G+L P+ W +V+TDDE DMM GDD W EFC MV+
Sbjct: 744 VDLSKFQNYEELIAELDRLFEFNGELMAPKKDWLIVYTDDENDMMRVGDDPWQEFCCMVR 803
Query: 624 KIFIYSTEEVKNM---ATSSKPIASSVEGEGT 652
KIFIY+ EEV+ M S + +V GEG+
Sbjct: 804 KIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGS 835
>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
Length = 621
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/627 (43%), Positives = 380/627 (60%), Gaps = 56/627 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LW CAGPL +P+ GE+VYYFPQGHIE +E ST EL H P+FDLPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+ ++ TDEVYAQI+L P+T + + P V+ F KILTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTEVMTHNTTMDTRRP---IVYFFSKILTASDVSLSGG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 200
+ +++A EC PPLDM+ TQ L AKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
T+KRL+ GD FV LRGENGELR G+RR HQQ +PSSVIS+ M GV+A+ +A KT
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 261 STLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+F V YKP +SQF+I +K+++A+++ + VG RF+M+FEG+D E+R+ GTI+GV D
Sbjct: 259 KCMFNVVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDM 318
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP--RSID 378
S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++Q ++K K+ + +
Sbjct: 319 SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKHWLQLNE 376
Query: 379 IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIV 438
I A+ S W Q +G S P+ E N+ +D + +
Sbjct: 377 IGATLSNLW---------TCQEIGQRSMNS-------PISVPEFSYP----NAIEDSKFL 416
Query: 439 AAQSVLSGYASSGRPGNTVIHEEVERGKK----SEASLGCWLFGIDLKHNSNTAAPLGRK 494
+ +L ++ P +++ + +K +EA+ C LFG+DL S +
Sbjct: 417 SG--LLLNHSLLAIPNENYNSDQMIQPRKEDITTEATTSCLLFGVDLTKVSKSK------ 468
Query: 495 VVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKV 554
D K S FD Q Q L+ S KE Q+ + + TR+R KV
Sbjct: 469 --DSICPIESCKKSLPQDKKFD--QTQPLR---------SPKEVQSTEFNF--TRSRIKV 513
Query: 555 QMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQ 614
MQG+A+ RAVDLTA+ GY+ L +LE++F+++ +LR R++W +VFT++EG ML GDD
Sbjct: 514 HMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVGDDP 573
Query: 615 WPEFCKMVKKIFIYSTEEVKNMATSSK 641
WPEFC M K+IFI S EE+K M +K
Sbjct: 574 WPEFCNMAKRIFICSKEEIKKMKLKNK 600
>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
Length = 704
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/387 (63%), Positives = 297/387 (76%), Gaps = 6/387 (1%)
Query: 4 VEPNFGCSLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQ 62
+ P +L SQ SGD LY ELW+ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ
Sbjct: 1 MPPAAAMALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQ 60
Query: 63 ELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEP 120
+Q L+DLPSK+LCRV+++EL AE +TDEVYAQI L PE +QT+
Sbjct: 61 VAGNQMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVAAEKASSASAAS 120
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
P+ V SFCK LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLHG EWRF
Sbjct: 121 PRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRF 180
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV 240
+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSV
Sbjct: 181 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSV 240
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKM 298
ISSQSMHLGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+M
Sbjct: 241 ISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRM 300
Query: 299 RFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
RFEGE++PE+RFTGTIVG + WP S WR LK++WDEP+T+ RP+RVSPW+IEP +
Sbjct: 301 RFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP-AS 359
Query: 359 SAPLNLAQPAVKSKRPRSIDIPASASA 385
S P+N + + KRPR P S A
Sbjct: 360 SPPVNPLPLSSRVKRPRQNAPPPSPEA 386
>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/399 (62%), Positives = 307/399 (76%), Gaps = 16/399 (4%)
Query: 18 PGSG---DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE-LTHQEPLFDL 73
PG G +L+ ELW+ACAGPLVEVP+ GERV+YF QGH+EQL+ T+ L Q +F +
Sbjct: 62 PGRGRDPELFAELWRACAGPLVEVPQRGERVFYFLQGHLEQLQEPTDSALLAEQIKMFQV 121
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE-PRSPDQCLPEPPKQTVHSFCKIL 132
P KILC+VV++EL AE ETDEVYAQITL P+ DQ++ P D LPE P+ VH+FCKIL
Sbjct: 122 PYKILCKVVNVELKAETETDEVYAQITLQPDADQSDLPLILDPTLPETPRPVVHTFCKIL 181
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
T SDTSTHGGFSVLR+HA ECLPPLDMT+ TPTQE+ +KDLHG EWRFKHI+RGQPRRHL
Sbjct: 182 TPSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQPRRHL 241
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWSTFVTSK+L+AGDAFV+LR E GE RVGVRRL +QS+MP+SVISSQSMHLGVLA
Sbjct: 242 LTTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLA 301
Query: 253 TAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
+A+HA+KT+++F+VYY+PR SQ+I+ +NKY A F+VGMRF+M FE ED P ++F
Sbjct: 302 SASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDVPVKKF 361
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEP-ATVQRPERVSPWEIEPFVASAPL--NLAQP 367
GTIVG GDFS QW GS+W+SLK+QWD+ A PERVSPWEI+ S+P L Q
Sbjct: 362 FGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAISTLLQS 421
Query: 368 AVKSKRPR----SIDIPAS--ASAFWYQGSTQSHDITQV 400
+ K+KRPR ++++P+ FW G TQ H+ T V
Sbjct: 422 SAKNKRPRETNENMNLPSQEPTQEFWLSGVTQQHERTYV 460
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 5/103 (4%)
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR 593
S +E Q++Q S R R KVQM G AVGRAVDL +L GY+ L +ELE+MFEI+ +
Sbjct: 646 SPREIQSQQSSIG--RNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIKDI---K 700
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+ V F D+EGD M GDD W EFC+MV+KI IY E+ KNM
Sbjct: 701 QNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNM 743
>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 805
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/387 (63%), Positives = 300/387 (77%), Gaps = 8/387 (2%)
Query: 14 SQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
SQ SGD LY ELW+ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ +Q L+D
Sbjct: 11 SQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYD 70
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPKQTVHSFCK 130
LP K+LCRV+++EL AE +TDEVYAQI L PE +QT+ P P+ V SFCK
Sbjct: 71 LPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCK 130
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLHG EWRF+HIFRGQPRR
Sbjct: 131 TLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRR 190
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVISSQSMHLGV
Sbjct: 191 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGV 250
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+MRFEGE++PE+
Sbjct: 251 LATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQ 310
Query: 309 RFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
RFTGTIVG + WP S WR LK++WDEP+T+ RP+RVSPW+IEP +S P+N +
Sbjct: 311 RFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVNPLVHS 369
Query: 369 VKSKRPRSIDIPAS--ASAFWYQGSTQ 393
++KRPR P S +S +G+T+
Sbjct: 370 SRAKRPRQNVPPPSLESSVLTKEGATK 396
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ Y +L EL+KMF+ +G+L
Sbjct: 673 APQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKMFDFEGEL 731
Query: 591 -RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
W +V+TDDEGDMML GDD W EFC +V+KI+IY+ EEV+ M + S
Sbjct: 732 VSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKS 782
>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
Length = 799
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/387 (63%), Positives = 300/387 (77%), Gaps = 8/387 (2%)
Query: 14 SQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
SQ SGD LY ELW+ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ +Q L+D
Sbjct: 5 SQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYD 64
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPKQTVHSFCK 130
LP K+LCRV+++EL AE +TDEVYAQI L PE +QT+ P P+ V SFCK
Sbjct: 65 LPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCK 124
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLHG EWRF+HIFRGQPRR
Sbjct: 125 TLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRR 184
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVISSQSMHLGV
Sbjct: 185 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGV 244
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+MRFEGE++PE+
Sbjct: 245 LATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQ 304
Query: 309 RFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
RFTGTIVG + WP S WR LK++WDEP+T+ RP+RVSPW+IEP +S P+N +
Sbjct: 305 RFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVNPLVHS 363
Query: 369 VKSKRPRSIDIPAS--ASAFWYQGSTQ 393
++KRPR P S +S +G+T+
Sbjct: 364 SRAKRPRQNVPPPSLESSVLTKEGATK 390
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ Y +L EL+KMF+ +G+L
Sbjct: 667 APQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKMFDFEGEL 725
Query: 591 -RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
W +V+TDDEGDMML GDD W EFC +V+KI+IY+ EEV+ M + S
Sbjct: 726 VSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKS 776
>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
thaliana [Arabidopsis thaliana]
Length = 619
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 281/636 (44%), Positives = 377/636 (59%), Gaps = 75/636 (11%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQ--------------------------L 56
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +
Sbjct: 24 VYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLSLLSLSV 83
Query: 57 EASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQC 116
E ST +EL +P+ DLPSK+ CRV+ I L E +DE YA+ITL P+T Q + ++
Sbjct: 84 ETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNEN 143
Query: 117 LPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGY 176
P V+SF K+LTASDTS HGGF V +KHA ECLP LDM+ P QEL A DLHG
Sbjct: 144 QFRP---LVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGN 200
Query: 177 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSM 236
+WRF H +RG P+RHLLTTGW+ F TSK+LVAGD VF+RGE GELRVG+RR HQQ ++
Sbjct: 201 QWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNI 260
Query: 237 PSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRF 296
PSS++S M GV+A+A HA +F V YKPR+S+FI+ +K+L+AV++ F+VG RF
Sbjct: 261 PSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRSSKFIVSYDKFLDAVNNKFNVGSRF 320
Query: 297 KMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF 356
MR EG+D ERR GTI+GV DFS W S+WRSL++QWDE + P++VSPW+IE
Sbjct: 321 TMRLEGDDFSERRCFGTIIGVSDFSPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL 380
Query: 357 VASAPLNLAQP-AVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSES-QVV 414
+ + +N+ + +K+KR R ++ GS+ SH + ++ T+GQ +E V
Sbjct: 381 MPA--INVPRSFLLKNKRLREVN---------EIGSSSSHLLPPIL--TQGQENEQLSVA 427
Query: 415 RPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPG---NTVIHEEVERGKKSEAS 471
PM + ++ ++T+D + +L Y P N + E+E ++
Sbjct: 428 SPM-----NISLRYRDATED--AMNPSKLLMSYPVQPMPKLNYNNQMVTEMEENITTKTG 480
Query: 472 LGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMA 531
LFG+ L P+ + DP F SQ
Sbjct: 481 TNFRLFGVTLD-----TPPV---IKDPIEEIGSEISKLTEGKKFGLSQTLR--------- 523
Query: 532 DVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR 591
S E QNKQ S S+RT TKVQMQG+ +GRAVDL+ L GYD L ELEK+F+I+GQL+
Sbjct: 524 --SPTEIQNKQFS--SSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQ 579
Query: 592 PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 627
R++W + FTD + D ML GDD WPEFC MVKKIFI
Sbjct: 580 TRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 615
>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/428 (61%), Positives = 318/428 (74%), Gaps = 17/428 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR G+ V+YFPQGH+EQ+EASTNQ Q PL+DLP KILCRVV
Sbjct: 50 LYNELWHACAGPLVTVPREGDHVFYFPQGHLEQVEASTNQVADQQMPLYDLPPKILCRVV 109
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
+++L AE +TDEV+AQ+TL P +Q E S + P PP + VHSFCK LTASDTSTHG
Sbjct: 110 NVQLKAEPDTDEVFAQVTLLPLHNQDENASEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 169
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 170 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFRHIFRGQPRRHLLQSGWSVFV 229
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQS++PSSVISS SMHLGVLATA HAV T
Sbjct: 230 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATAWHAVSTG 289
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRTS +FI+ ++Y+E+V +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 290 TMFTVYYKPRTSPAEFIVPFDQYMESVKSNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 349
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W SKWR LK++WDE +T+ RP+RVSPW+IEP +A LN P + KRPR+
Sbjct: 350 ADPSRWKDSKWRCLKVRWDETSTIPRPDRVSPWKIEPALAPPALN-PLPMPRPKRPRANM 408
Query: 379 IPAS--ASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHR 436
+P+S +S +GS++ T SS S R +R +E ST+ N +
Sbjct: 409 VPSSPDSSVLTREGSSK---------VTADPSSASGFSRVLRGQEF-STLRGNFEEGNES 458
Query: 437 IVAAQSVL 444
VA +SVL
Sbjct: 459 DVAEKSVL 466
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 106/198 (53%), Gaps = 27/198 (13%)
Query: 474 CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRG--MA 531
C LFGI LK + P + PT + G + AS S++ E RG +A
Sbjct: 644 CKLFGIPLK----ISKPATPEQAGPTNMVNEPMGHTQPASHQLTSESDQKSEHSRGSKLA 699
Query: 532 DVSRKE---------TQNKQGSA--ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
D + E ++ G A +STR+ TKV QGIA+GR+VDLT YD+L EL
Sbjct: 700 DENENEKPLQVGHMRMRDSHGKAQNSSTRSCTKVHKQGIALGRSVDLTRFNNYDELIAEL 759
Query: 581 EKMFEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVK----- 634
+++FE G+L P+ W +V+TDDE DMML GDD W EF MV+KI IY+ EEV+
Sbjct: 760 DRLFEFNGELLAPQKNWLIVYTDDEDDMMLVGDDPWQEFVGMVRKIVIYTREEVQRIKPG 819
Query: 635 --NMATSSKPIASSVEGE 650
N + P S VEGE
Sbjct: 820 TLNSRVNENP--SGVEGE 835
>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
Length = 851
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 263/450 (58%), Positives = 330/450 (73%), Gaps = 16/450 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSKILCRV+
Sbjct: 54 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 113
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE Q E + P PP+ VHSFCK LTASDTSTHG
Sbjct: 114 NVDLKAEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCKTLTASDTSTHG 173
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 174 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFV 233
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 234 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 293
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 294 TMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 353
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W SKWRSLK++WDE ++ RP+RVSPW+IEP ++ L+ P + KRPRS
Sbjct: 354 SDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPV-PMPRPKRPRSNL 412
Query: 379 IPAS--ASAFWYQGSTQSH-DITQVVGAT---EGQSSESQVVRPMRQKEIDS---TIINN 429
P++ +S +GS++++ D G + +GQ + + + E D+ +++
Sbjct: 413 APSTPDSSMRIREGSSKANMDPLPASGLSRVLQGQEYPTLRTKHVESGECDAPENSVVWQ 472
Query: 430 NSTDDHR--IVAAQSVLSGYASSGRPGNTV 457
+S DD + +V+A + SSGR G T
Sbjct: 473 SSADDDKVDVVSASRRYENWISSGRHGPTC 502
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 115/206 (55%), Gaps = 16/206 (7%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSN-TAAPLG-RKVVDPTTGTSGVKGSARAASD 514
V+ EE + + C LFGI L +N N T L R ++ TG + + S +
Sbjct: 633 VVEEEAAKPRDG----NCRLFGIPLVNNVNGTDTTLSQRNNLNDCTGPTQI-ASPKVQDL 687
Query: 515 FDASQ----NQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTAL 570
D S+ D +E R V++ ++ Q S R+ TKVQ QGIA+GR+VDL+
Sbjct: 688 SDQSKGSKSTNDHREQGRPFP-VNKPHPKDVQTKTNSCRSCTKVQKQGIALGRSVDLSKF 746
Query: 571 KGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYS 629
+ Y++L EL+++FE G+L P+ W +V+TDDE DMML GDD W EFC MV+KIFIY+
Sbjct: 747 QNYEELVTELDRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYT 806
Query: 630 TEEVKNM---ATSSKPIASSVEGEGT 652
EEV+ M S + V GEG+
Sbjct: 807 KEEVRKMNPGTLSCRNEEEPVVGEGS 832
>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 822
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/387 (63%), Positives = 300/387 (77%), Gaps = 8/387 (2%)
Query: 14 SQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
SQ SGD LY ELW+ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ +Q L+D
Sbjct: 11 SQPPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYD 70
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPKQTVHSFCK 130
LP K+LCRV+++EL AE +TDEVYAQI L PE +QT+ P P+ V SFCK
Sbjct: 71 LPPKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCK 130
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLHG EWRF+HIFRGQPRR
Sbjct: 131 TLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRR 190
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVISSQSMHLGV
Sbjct: 191 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGV 250
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+MRFEGE++PE+
Sbjct: 251 LATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQ 310
Query: 309 RFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
RFTGTIVG + WP S WR LK++WDEP+T+ RP+RVSPW+IEP +S P+N +
Sbjct: 311 RFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVNPLVHS 369
Query: 369 VKSKRPRSIDIPAS--ASAFWYQGSTQ 393
++KRPR P S +S +G+T+
Sbjct: 370 SRAKRPRQNVPPPSLESSVLTKEGATK 396
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ Y +L EL+KMF+ +G+L
Sbjct: 673 APQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKMFDFEGEL 731
Query: 591 -RPRDKWAVVFTDDEGDMMLAGDDQW 615
W +V+TDDEGDMML GDD W
Sbjct: 732 VSGSQNWQIVYTDDEGDMMLVGDDPW 757
>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 851
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/364 (66%), Positives = 291/364 (79%), Gaps = 5/364 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR ERV+YFPQGHIEQ+EASTNQ P++DLP KILCRV+
Sbjct: 48 LYRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVI 107
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
++ L AE +TDEV+AQ+TL PE +Q E + P PP + VHSFCK LTASDTSTHG
Sbjct: 108 NVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHG 167
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 168 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 227
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 228 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 287
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRTS +FI+ ++Y+E++ + +++GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 288 TMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIED 347
Query: 320 F-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+++WP SKWRSLK++WDE + + RPERVS W+IEP +A LN P + KRPRS
Sbjct: 348 ADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALAPLALN-PLPMPRPKRPRSNV 406
Query: 379 IPAS 382
+P+S
Sbjct: 407 VPSS 410
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 5/122 (4%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRD 594
K+ Q K S S R+ TKV +GIA+GR+VDLT Y +L EL+++FE G+L P+
Sbjct: 715 KDVQAKSHSG-SARSCTKVHKKGIALGRSVDLTKFSDYGELITELDQLFEFGGELTSPQK 773
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA---TSSKPIASSVEGEG 651
W +V+TD+EGDMML GDD W EF MV+KI+IY EE++ M+ SSK + EG
Sbjct: 774 DWLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSASEG 833
Query: 652 TA 653
A
Sbjct: 834 AA 835
>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
Length = 782
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/367 (65%), Positives = 291/367 (79%), Gaps = 11/367 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR GE+V+YFPQGHIEQ+EASTNQ Q P++ LPSKILC V+
Sbjct: 55 LYNELWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTNQVSDQQMPIYKLPSKILCTVI 114
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP----KQTVHSFCKILTASDTS 138
+I+L AE +TDEV+AQ+TL PE+ Q E D + PP + VHSFCK LTASDTS
Sbjct: 115 NIDLKAEPDTDEVFAQMTLVPESTQDEK---DIIIETPPPLQSRPHVHSFCKTLTASDTS 171
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSVLR+HA ECLPPLDM P+QEL AKDLHG EW F+HIFRGQPRRHLL +GWS
Sbjct: 172 THGGFSVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPRRHLLQSGWS 231
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+SKRLVAGDAF+FLRGENGELRVGVRR QQS++PSSVISS SMHLGVLATA+HA+
Sbjct: 232 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATASHAI 291
Query: 259 KTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
+T T+F VYYKPRT S+FI+ +Y+E++ +S+GMRFKMRFEGE++PE+RFTGTI+G
Sbjct: 292 QTGTMFTVYYKPRTSPSEFIVPFAQYVESIKKNYSIGMRFKMRFEGEEAPEQRFTGTIIG 351
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+GD S +WP SKWR LK++WDE +V RP+++SPW+IEP +A LN P ++KRPR
Sbjct: 352 IGDVDSTRWPESKWRCLKVRWDEQTSVPRPDKISPWQIEPALAPIALN-PLPVSRTKRPR 410
Query: 376 SIDIPAS 382
+P S
Sbjct: 411 PNILPTS 417
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 467 KSEASLGCWLFGIDLKHNS--NTAAPLGRKVVDPTTGT---------SGVKGSARAASDF 515
KS+ S C LFGI LK +S + + KV D T + + A
Sbjct: 622 KSKGSGNCKLFGISLKSSSQQHETSSSHAKVADEAAQTFCKPQALESDRLSEPLKCAKSL 681
Query: 516 DASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDD 575
D + D EVK + + +STR+ TKVQ QG A+GR+VDL Y++
Sbjct: 682 D-TLCSDSDEVKTNQPVQQHSRDAHNKPLCSSTRSCTKVQKQGSALGRSVDLAKFTSYEE 740
Query: 576 LFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQW 615
L EL+ MFE QG+L +K W VV+TD+EGDMML GDD W
Sbjct: 741 LITELDHMFEFQGELMNSNKNWLVVYTDNEGDMMLVGDDPW 781
>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
Length = 821
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/378 (65%), Positives = 295/378 (78%), Gaps = 5/378 (1%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
G S SS G LYRELW ACAGPLV VPR GE V+YFPQGHIEQ+EASTNQ
Sbjct: 30 GSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHM 89
Query: 69 PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHS 127
P++DL KILCRV+++ L AE +TDEV+AQ+TL PE +Q E + PP+ VHS
Sbjct: 90 PVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHS 149
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQ
Sbjct: 150 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQ 209
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMH
Sbjct: 210 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 269
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HAV T T+F VYYKPRTS +FI+ ++Y+E++ + +++GMRFKMRFEGE++
Sbjct: 270 LGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEA 329
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
PE+RFTGTIVG+ D S++WP SKWR LK++WDE + + RPERVSPW+IEP +A LN
Sbjct: 330 PEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALN- 388
Query: 365 AQPAVKSKRPRSIDIPAS 382
P + KRPR+ +P+S
Sbjct: 389 PLPMPRPKRPRANVVPSS 406
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDD 603
+ S R+ TKV +GIA+GR+VDLT YD+L EL+++FE +G+L P+ W VVFTD+
Sbjct: 694 SGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDN 753
Query: 604 EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
EGDMML GDD W EFC MV+KI+IY EE++ M+
Sbjct: 754 EGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMS 787
>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/391 (62%), Positives = 303/391 (77%), Gaps = 10/391 (2%)
Query: 11 SLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP 69
++++ P +GD LY ELW ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ +Q
Sbjct: 5 AMATPQAPSAGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMR 64
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE---PRSPDQCLPEPPKQTVH 126
L+DLP K+LCRV+++EL AE +TDEVYAQ+ L PE +Q E +S PP+ V
Sbjct: 65 LYDLPPKLLCRVINVELKAEADTDEVYAQVMLMPEPEQNEMAVDKSTSTTGATPPRPAVR 124
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SFCK LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLHG +WRF+HIFRG
Sbjct: 125 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRG 184
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLL +GWS FV+SKRLVAGDAF+FLRGE+GELRVGVRR Q S++PSSVISS SM
Sbjct: 185 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSM 244
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
HLGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+MRFEGE+
Sbjct: 245 HLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEE 304
Query: 305 SPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
+PE+RFTGTIVG + + WP S WRSLK++WDEP+T+ RP+RVSPW+IEP +S P+N
Sbjct: 305 APEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVN- 362
Query: 365 AQPAVKSKRPRSIDIPAS--ASAFWYQGSTQ 393
P + KRPR P S +S +G+T+
Sbjct: 363 PLPLSRVKRPRPNVPPVSPESSVLTKEGATK 393
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ YD+L EL++MFE G+L
Sbjct: 663 APNSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFGDYDELTAELDRMFEFDGEL 721
Query: 591 RPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
++ W +V+TD EGDMML GDD W EFC +V+KIFIY+ EEV+ M + S
Sbjct: 722 MSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKEEVQKMNSKS 772
>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
Length = 814
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 253/427 (59%), Positives = 319/427 (74%), Gaps = 18/427 (4%)
Query: 17 GPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
GP +GD L+ ELW ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ +Q L+DLPS
Sbjct: 12 GPSAGDPLFNELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLYDLPS 71
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTE---PRSPDQCLPEPPKQTVHSFCKIL 132
K+LC V+++EL AE +TDEVYAQ+ L PE DQ E +S + K V SFCK L
Sbjct: 72 KLLCSVINVELKAEADTDEVYAQVMLIPENDQNEMAVEKSSSKAATTLAKPAVRSFCKTL 131
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLHG +WRF+HIFRGQPRRHL
Sbjct: 132 TASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHL 191
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
L +GWS FV+SKRLVAGDAF+FLRGE+GELRVGVRR Q S++PSSVISS SMHLGVLA
Sbjct: 192 LQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLA 251
Query: 253 TAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
TA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+G+RF+MRFEGE++PE+RF
Sbjct: 252 TAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGVRFRMRFEGEEAPEQRF 311
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
TGTI+G + WP S WRSLK++WDEP+T+ RP+RVSPW+IEP +S P+N P +
Sbjct: 312 TGTIIGSENLDPLWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVN-PLPLSR 369
Query: 371 SKRPRSIDIPAS--ASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIIN 428
KRPR PAS +SA +G+T+ V + + Q +++ +V Q + T+ +
Sbjct: 370 VKRPRPNVPPASPESSALTKEGATKVD-----VDSAQAQRNQTSMV---LQGQEPMTLRS 421
Query: 429 NNSTDDH 435
NN TD +
Sbjct: 422 NNLTDSN 428
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 82/118 (69%), Gaps = 4/118 (3%)
Query: 520 NQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDE 579
N++ K +++ A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ YD+L E
Sbjct: 667 NENEKSIQQ--APQSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFSDYDELKAE 723
Query: 580 LEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
L+KMFE G+L +K W +V+TD+E DMML GDD W EFC +V+KI IY+ EEV+ M
Sbjct: 724 LDKMFEFDGELMSSNKNWQIVYTDNEDDMMLVGDDPWGEFCSIVRKICIYTKEEVQKM 781
>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
Length = 766
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/378 (65%), Positives = 295/378 (78%), Gaps = 5/378 (1%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
G S SS G LYRELW ACAGPLV VPR GE V+YFPQGHIEQ+EASTNQ
Sbjct: 30 GSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHM 89
Query: 69 PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHS 127
P++DL KILCRV+++ L AE +TDEV+AQ+TL PE +Q E + PP+ VHS
Sbjct: 90 PVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHS 149
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQ
Sbjct: 150 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQ 209
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMH
Sbjct: 210 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 269
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HAV T T+F VYYKPRTS +FI+ ++Y+E++ + +++GMRFKMRFEGE++
Sbjct: 270 LGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEA 329
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
PE+RFTGTIVG+ D S++WP SKWR LK++WDE + + RPERVSPW+IEP +A LN
Sbjct: 330 PEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALN- 388
Query: 365 AQPAVKSKRPRSIDIPAS 382
P + KRPR+ +P+S
Sbjct: 389 PLPMPRPKRPRANVVPSS 406
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDD 603
+ S R+ TKV +GIA+GR+VDLT YD+L EL+++FE +G+L P+ W VVFTD+
Sbjct: 694 SGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDN 753
Query: 604 EGDMMLAGDDQW 615
EGDMML GDD W
Sbjct: 754 EGDMMLVGDDPW 765
>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
Length = 715
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/378 (65%), Positives = 295/378 (78%), Gaps = 5/378 (1%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
G S SS G LYRELW ACAGPLV VPR GE V+YFPQGHIEQ+EASTNQ
Sbjct: 30 GSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHM 89
Query: 69 PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHS 127
P++DL KILCRV+++ L AE +TDEV+AQ+TL PE +Q E + PP+ VHS
Sbjct: 90 PVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHS 149
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQ
Sbjct: 150 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQ 209
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMH
Sbjct: 210 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 269
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HAV T T+F VYYKPRTS +FI+ ++Y+E++ + +++GMRFKMRFEGE++
Sbjct: 270 LGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEA 329
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
PE+RFTGTIVG+ D S++WP SKWR LK++WDE + + RPERVSPW+IEP +A LN
Sbjct: 330 PEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALN- 388
Query: 365 AQPAVKSKRPRSIDIPAS 382
P + KRPR+ +P+S
Sbjct: 389 PLPMPRPKRPRANVVPSS 406
>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
Length = 803
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/428 (59%), Positives = 311/428 (72%), Gaps = 20/428 (4%)
Query: 17 GPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
G +GD LY ELW ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ Q L+DLPS
Sbjct: 9 GSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPS 68
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTE-------PRS-PDQCLPEPPKQTVHS 127
K+LCRV+++EL AEQ+TDEVYAQ+ L PE +Q E P S P Q P V S
Sbjct: 69 KLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARP-----PVRS 123
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLH +WRF+HIFRGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQ 183
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVISSQSMH
Sbjct: 184 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMH 243
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +SVGMRF+MRFEGE++
Sbjct: 244 LGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEA 303
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
PE+RFTGTI+G + WP S WRSLK++WDEP+T+ RP+RVSPW+IEP +S P+N
Sbjct: 304 PEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVN-P 361
Query: 366 QPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDST 425
P + KRPR PAS + + T A Q+ S V++ Q + S
Sbjct: 362 LPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQN--STVLQGQEQMTLRSN 419
Query: 426 IINNNSTD 433
+ +N +D
Sbjct: 420 LTESNDSD 427
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ YD+L EL+KMFE G+L
Sbjct: 670 AQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGEL 728
Query: 591 RPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+K W +V+TD+EGDMML GDD W EFC +V+KI+IY+ EEV+ M + S
Sbjct: 729 VSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSN 780
>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
Length = 808
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/428 (59%), Positives = 311/428 (72%), Gaps = 20/428 (4%)
Query: 17 GPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
G +GD LY ELW ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ Q L+DLPS
Sbjct: 14 GSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPS 73
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTE-------PRS-PDQCLPEPPKQTVHS 127
K+LCRV+++EL AEQ+TDEVYAQ+ L PE +Q E P S P Q P V S
Sbjct: 74 KLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARP-----PVRS 128
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLH +WRF+HIFRGQ
Sbjct: 129 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQ 188
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVISSQSMH
Sbjct: 189 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMH 248
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +SVGMRF+MRFEGE++
Sbjct: 249 LGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEA 308
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
PE+RFTGTI+G + WP S WRSLK++WDEP+T+ RP+RVSPW+IEP +S P+N
Sbjct: 309 PEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVN-P 366
Query: 366 QPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDST 425
P + KRPR PAS + + T A Q+ S V++ Q + S
Sbjct: 367 LPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQN--STVLQGQEQMTLRSN 424
Query: 426 IINNNSTD 433
+ +N +D
Sbjct: 425 LTESNDSD 432
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ YD+L EL+KMFE G+L
Sbjct: 675 AQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGEL 733
Query: 591 RPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+K W +V+TD+EGDMML GDD W EFC +V+KI+IY+ EEV+ M + S
Sbjct: 734 VSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSN 785
>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
Length = 848
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 260/451 (57%), Positives = 331/451 (73%), Gaps = 18/451 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSKILCRV+
Sbjct: 53 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 112
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE Q E + P PP + VHSFCK LTASDTSTHG
Sbjct: 113 NVDLKAEADTDEVYAQITLLPEPVQDENSIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 172
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 173 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFV 232
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 233 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 292
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y E+V +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 293 TMFTVYYKPRTSPSEFIVPFDQYTESVKINYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 352
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W SKWRSLK++WDE ++ RP+RVSPW+IEP ++ L+ P + KRPRS +
Sbjct: 353 SDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPV-PMPRPKRPRS-N 410
Query: 379 IPAS---ASAFWYQGSTQSH-------DITQVVGATEGQSSESQVVRPMRQKEIDSTIIN 428
+ +S +S +GS++++ +++V+ E + ++ V + +++++
Sbjct: 411 LASSTPDSSMRIREGSSKANMDPLPASGLSRVLQGQEYPTLRTKHVESVECDAPENSVVW 470
Query: 429 NNSTDDHR--IVAAQSVLSGYASSGRPGNTV 457
+STDD + +++A + SSGR G T
Sbjct: 471 QSSTDDDKVDVISASRRYENWISSGRHGPTC 501
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 11/186 (5%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSN-TAAPLGRK--VVDPTTGTSGVKGSARAAS 513
V+ EE + + C LFGI L +N N T L ++ + DP T + S
Sbjct: 630 VVQEEAAKPRDG----NCRLFGIPLVNNVNGTDTTLSQRNNLNDPAGPTQMASPKVQDLS 685
Query: 514 DFD--ASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALK 571
D + D +E R VS+ ++ Q S R+ TKVQ QGIA+GR+VDL+ +
Sbjct: 686 DQSKGSKSTNDHREQGRPFP-VSKPHPKDVQTKTNSCRSCTKVQKQGIALGRSVDLSKFQ 744
Query: 572 GYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYST 630
Y++L EL+++FE G+L P+ W +V+TDDE DMML GDD W EFC MV+KIFIY+
Sbjct: 745 NYEELVTELDRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTK 804
Query: 631 EEVKNM 636
EEV+ M
Sbjct: 805 EEVRKM 810
>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 806
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/395 (62%), Positives = 300/395 (75%), Gaps = 9/395 (2%)
Query: 6 PNFGCSLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL 64
P +L SQ SGD LY ELW+ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ
Sbjct: 2 PPAAMALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVA 61
Query: 65 THQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPK 122
+ L+DLPSK+LCRV+++EL AE +TDEVYAQI L PE +Q + PP+
Sbjct: 62 GNPMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPR 121
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
V SFCK LTASDTSTHGGFSVLR+HA ECLP LDM+ + PTQEL AKDLHG EWRF+H
Sbjct: 122 PAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRH 181
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS 242
IFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVIS
Sbjct: 182 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVIS 241
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRF 300
SQSMHLGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+MRF
Sbjct: 242 SQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRF 301
Query: 301 EGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
EGE++PE+RFTGTIVG + WP S WR LK++WDEP+T+ RP++VSPW+IEP +S
Sbjct: 302 EGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP-ASSP 360
Query: 361 PLNLAQPAVKSKRPRSIDIPAS--ASAFWYQGSTQ 393
P+N P + KRPR P S +S +G+T+
Sbjct: 361 PVN-PLPLSRGKRPRQNAPPPSPESSVLTKEGATK 394
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 85/121 (70%), Gaps = 7/121 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
+++++V++ D+ K QG ASTR+ TKV QG+A+GR+VDL+ Y +L EL
Sbjct: 670 ENIQQVQQSSKDIQSK----SQG--ASTRSCTKVHKQGVALGRSVDLSKFTDYGELKAEL 723
Query: 581 EKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 639
+KMFE +G+L ++ W +V+TD+EGDMML GDD W EFC +V+KI+IY+ EEV+ M +
Sbjct: 724 DKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEEVQKMNSK 783
Query: 640 S 640
S
Sbjct: 784 S 784
>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 812
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/395 (62%), Positives = 300/395 (75%), Gaps = 9/395 (2%)
Query: 6 PNFGCSLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL 64
P +L SQ SGD LY ELW+ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ
Sbjct: 2 PPAAMALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVA 61
Query: 65 THQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPK 122
+ L+DLPSK+LCRV+++EL AE +TDEVYAQI L PE +Q + PP+
Sbjct: 62 GNPMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPR 121
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
V SFCK LTASDTSTHGGFSVLR+HA ECLP LDM+ + PTQEL AKDLHG EWRF+H
Sbjct: 122 PAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRH 181
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS 242
IFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVIS
Sbjct: 182 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVIS 241
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRF 300
SQSMHLGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+MRF
Sbjct: 242 SQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRF 301
Query: 301 EGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
EGE++PE+RFTGTIVG + WP S WR LK++WDEP+T+ RP++VSPW+IEP +S
Sbjct: 302 EGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP-ASSP 360
Query: 361 PLNLAQPAVKSKRPRSIDIPAS--ASAFWYQGSTQ 393
P+N P + KRPR P S +S +G+T+
Sbjct: 361 PVN-PLPLSRGKRPRQNAPPPSPESSVLTKEGATK 394
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 85/127 (66%), Gaps = 13/127 (10%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
+++++V++ D+ K QG ASTR+ TKV QG+A+GR+VDL+ Y +L EL
Sbjct: 670 ENIQQVQQSSKDIQSK----SQG--ASTRSCTKVHKQGVALGRSVDLSKFTDYGELKAEL 723
Query: 581 EKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWP------EFCKMVKKIFIYSTEEV 633
+KMFE +G+L ++ W +V+TD+EGDMML GDD W EFC +V+KI+IY+ EEV
Sbjct: 724 DKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWDPLLTSREFCNIVRKIYIYTKEEV 783
Query: 634 KNMATSS 640
+ M + S
Sbjct: 784 QKMNSKS 790
>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
Length = 791
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/424 (60%), Positives = 309/424 (72%), Gaps = 20/424 (4%)
Query: 21 GD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
GD LY ELW ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ Q L+DLPSK+LC
Sbjct: 1 GDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLC 60
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTE-------PRS-PDQCLPEPPKQTVHSFCKI 131
RV+++EL AEQ+TDEVYAQ+ L PE +Q E P S P Q P V SFCK
Sbjct: 61 RVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARP-----PVRSFCKT 115
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLH +WRF+HIFRGQPRRH
Sbjct: 116 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRH 175
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVISSQSMHLGVL
Sbjct: 176 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVL 235
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
ATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +SVGMRF+MRFEGE++PE+R
Sbjct: 236 ATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQR 295
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV 369
FTGTI+G + WP S WRSLK++WDEP+T+ RP+RVSPW+IEP +S P+N P
Sbjct: 296 FTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVN-PLPLS 353
Query: 370 KSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
+ KRPR PAS + + T A Q+ S V++ Q + S + +
Sbjct: 354 RVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQN--STVLQGQEQMTLRSNLTES 411
Query: 430 NSTD 433
N +D
Sbjct: 412 NDSD 415
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ YD+L EL+KMFE G+L
Sbjct: 658 AQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGEL 716
Query: 591 RPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+K W +V+TD+EGDMML GDD W EFC +V+KI+IY+ EEV+ M + S
Sbjct: 717 VSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSN 768
>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 728
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/395 (62%), Positives = 300/395 (75%), Gaps = 9/395 (2%)
Query: 6 PNFGCSLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL 64
P +L SQ SGD LY ELW+ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ
Sbjct: 2 PPAAMALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVA 61
Query: 65 THQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPK 122
+ L+DLPSK+LCRV+++EL AE +TDEVYAQI L PE +Q + PP+
Sbjct: 62 GNPMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPR 121
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
V SFCK LTASDTSTHGGFSVLR+HA ECLP LDM+ + PTQEL AKDLHG EWRF+H
Sbjct: 122 PAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRH 181
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS 242
IFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVIS
Sbjct: 182 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVIS 241
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRF 300
SQSMHLGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+MRF
Sbjct: 242 SQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRF 301
Query: 301 EGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
EGE++PE+RFTGTIVG + WP S WR LK++WDEP+T+ RP++VSPW+IEP +S
Sbjct: 302 EGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP-ASSP 360
Query: 361 PLNLAQPAVKSKRPRSIDIPAS--ASAFWYQGSTQ 393
P+N P + KRPR P S +S +G+T+
Sbjct: 361 PVN-PLPLSRGKRPRQNAPPPSPESSVLTKEGATK 394
>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
Length = 801
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/390 (62%), Positives = 299/390 (76%), Gaps = 9/390 (2%)
Query: 11 SLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP 69
+L SQ SGD LY ELW+ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ +
Sbjct: 2 ALPSQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMR 61
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPKQTVHS 127
L+DLPSK+LCRV+++EL AE +TDEVYAQI L PE +Q + PP+ V S
Sbjct: 62 LYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRS 121
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLP LDM+ + PTQEL AKDLHG EWRF+HIFRGQ
Sbjct: 122 FCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQ 181
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVISSQSMH
Sbjct: 182 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMH 241
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +S+GMRF+MRFEGE++
Sbjct: 242 LGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEA 301
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
PE+RFTGTIVG + WP S WR LK++WDEP+T+ RP++VSPW+IEP +S P+N
Sbjct: 302 PEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP-ASSPPVN-P 359
Query: 366 QPAVKSKRPRSIDIPAS--ASAFWYQGSTQ 393
P + KRPR P S +S +G+T+
Sbjct: 360 LPLSRGKRPRQNAPPPSPESSVLTKEGATK 389
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 85/121 (70%), Gaps = 7/121 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
+++++V++ D+ K QG ASTR+ TKV QG+A+GR+VDL+ Y +L EL
Sbjct: 665 ENIQQVQQSSKDIQSK----SQG--ASTRSCTKVHKQGVALGRSVDLSKFTDYGELKAEL 718
Query: 581 EKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 639
+KMFE +G+L ++ W +V+TD+EGDMML GDD W EFC +V+KI+IY+ EEV+ M +
Sbjct: 719 DKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEEVQKMNSK 778
Query: 640 S 640
S
Sbjct: 779 S 779
>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 629
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 287/641 (44%), Positives = 384/641 (59%), Gaps = 69/641 (10%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE L S + L+ L S L RV+
Sbjct: 25 MYEQLWKLCAGPLYDIPKVGEKVYYFPQGHIEILSLSLSLSLSLSLSLSLSLSLSLSRVI 84
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E+ +DE YA+ITL P T Q + + P +V+SF K+LTASDTS HGG
Sbjct: 85 AIQLKVEKNSDETYAEITLMPYTTQVVIHNQNDNHYRP---SVNSFTKVLTASDTSAHGG 141
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV RKHA ECLPPL+M+ P QEL DL G +WRFKH +RG P RHL+TTGW+ F T
Sbjct: 142 FSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGWNAFTT 201
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LVAGD VFLRGE GELRVG+RR HQQ + PSS+IS SM GV+A+A HA
Sbjct: 202 SKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHGVIASAVHAFDNQC 261
Query: 263 LFIVYYKP--RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+FIV KP R+SQFI+ +K+L+AV+ F+VG RF MRFEG+D ERR++GTI+GV DF
Sbjct: 262 MFIVVCKPSIRSSQFIVSYDKFLDAVNKKFNVGSRFTMRFEGDDLSERRYSGTIIGVKDF 321
Query: 321 SEQWPGSKWRS-------------LKIQWDEPATVQRPERVSPWEIEPFVASAPLN--LA 365
S W S+WRS L+++WDE A+ RP++VSPWEIE PL+ L
Sbjct: 322 SPHWIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIEHL---TPLSNVLR 378
Query: 366 QPAVKSKRPRSID-IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDS 424
+K+KR R ++ I +++S STQ +I GQ S ++ PM +
Sbjct: 379 SSLLKNKRSREVNEIGSTSSHLLPPISTQDQEI--------GQPS---MIYPM-----NV 422
Query: 425 TIINNNSTDDHRIVAAQSVLSGYASSGRP----GNTVIHEEVERGKKSEASLGCWLFGID 480
++T+D I +L Y P N + +E+ + AS C LFG+
Sbjct: 423 LPSYRDATEDAEI--PSRLLISYPVPTMPKLTYNNNQMVTPLEKNITTNASASCRLFGVS 480
Query: 481 LKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKR---GMADVSRKE 537
L S P+ ++ + S+ L + K+ G S +E
Sbjct: 481 LATPSEIKDPIDQQ------------------DSYQISEISKLSQEKKFGLGQTLTSARE 522
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWA 597
Q+KQ S STR+ TKVQM+G+ VGRA+DL+ L GYD L ELEK+F++ GQL+ R++W
Sbjct: 523 IQSKQLS--STRSCTKVQMEGVTVGRALDLSVLNGYDQLILELEKLFDLNGQLQTRNQWE 580
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
+ F D+EGD M GDD WPEFC MVK+I IY+ E+VKN+ +
Sbjct: 581 ISFIDNEGDKMFVGDDPWPEFCNMVKRIIIYTKEKVKNLKS 621
>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
Length = 688
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/386 (64%), Positives = 302/386 (78%), Gaps = 12/386 (3%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQEPLFDLPSKILCR 80
+L+ ELW+ACAGPLVE+P+ ERV+YF QGH+EQL+ T+ L Q +F +P+KILC+
Sbjct: 8 ELFAELWRACAGPLVELPQTDERVFYFLQGHLEQLQEPTDPALLADQIKMFQVPNKILCK 67
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQ-TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
VV++EL AE ETDE+YAQITL PE DQ P PD LPE + VHSFCKILT SDTST
Sbjct: 68 VVNVELKAETETDEMYAQITLQPEPDQMDLPTLPDPPLPETSRPVVHSFCKILTPSDTST 127
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSVLR+HA ECLPPLDM++ TPTQEL KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 128 HGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 187
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FVTSK+L+AGDAFV+LR E GE RVGVRRL +QS+MP+SVISSQSMHLGVLA+A+HA+K
Sbjct: 188 FVTSKKLIAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIK 247
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
T+++F+VYY+PR SQ+I+ LNKYLE+ F+VGMRFKM FEGED P ++F+GT+V
Sbjct: 248 TNSIFLVYYRPRLSQSQYIVSLNKYLESSKIGFNVGMRFKMSFEGEDVPVKKFSGTVVDK 307
Query: 318 GDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP-LNL-AQPAVKSKRPR 375
GD S W GS W++LK++WDE PERVS WEIEPF ASAP +N+ QP++K+KRPR
Sbjct: 308 GDLSPHWQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASAPAINIPVQPSMKNKRPR 367
Query: 376 ----SIDIPA--SASAFWYQGSTQSH 395
S+DI A A FW G + H
Sbjct: 368 ETAESLDIHALEPAQEFWLSGRPEQH 393
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 90/157 (57%), Gaps = 13/157 (8%)
Query: 476 LFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDF-DASQNQDLKEVKRG---MA 531
LFG++L +++ ++ + D T G + S R A F D+ Q L V + +
Sbjct: 519 LFGVNLVNHTRSSG-----IADKMTVGVG-ETSMRGAGSFEDSGQLSALSRVTKDHTHLV 572
Query: 532 DVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR 591
+ S +E Q+ Q + S R R KVQM G AVG+AVDL L GY L ELE+MFEI+ L
Sbjct: 573 NESPREIQSHQ--SCSGRNRIKVQMHGHAVGKAVDLGNLDGYVQLMGELEEMFEIK-DLG 629
Query: 592 PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIY 628
+++W V FT+DE D M G W EFC+MV+KI I+
Sbjct: 630 SKEEWKVTFTNDENDTMEVGAVLWQEFCQMVRKIVIH 666
>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/411 (61%), Positives = 307/411 (74%), Gaps = 20/411 (4%)
Query: 2 AYVEPNFG-------------CSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYF 48
Y EPN G S+S G LY ELW ACAGPLV VPR ERV+YF
Sbjct: 23 GYSEPNDGGVSRSVAEGQKGHSSVSGAGKDFETALYTELWHACAGPLVTVPRERERVFYF 82
Query: 49 PQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQT 108
PQGHIEQ+EASTNQ Q P++DLPSKILCRV++++L AE +TDEV+AQ+TL PE +Q
Sbjct: 83 PQGHIEQVEASTNQVSDQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQD 142
Query: 109 E-PRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQE 167
E + + P PP+ VHSFCK LTASDTSTHGGFSVLR+HA ECLP LDM+ PTQE
Sbjct: 143 ETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQE 202
Query: 168 LAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVR 227
L AKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVR
Sbjct: 203 LVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVR 262
Query: 228 RLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEA 285
R QQ ++PSSVISS SMHLGVLATA HA T T+F VYYKPRTS +FI+ ++Y+E+
Sbjct: 263 RAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMES 322
Query: 286 VHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQR 344
V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D ++W SKWR LK++WDE +T+ R
Sbjct: 323 VKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPR 382
Query: 345 PERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPAS--ASAFWYQGSTQ 393
P+RVSPW+IEP V LN P + KRPRS +P+S +S +GS++
Sbjct: 383 PDRVSPWKIEPAVTPPALN-PLPVPRPKRPRSNMVPSSPDSSVLTREGSSK 432
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 104/177 (58%), Gaps = 16/177 (9%)
Query: 474 CWLFGIDLKHNSNTAAPLG--RKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMA 531
C LFGI L N + P R + + G + SA SD + Q++ K +A
Sbjct: 650 CKLFGIPLIGNPVISEPAMSYRSMTNEPAGHLHLAPSA-FDSDQKSEQSKGAKSTDNPLA 708
Query: 532 DVSRKE---------TQNKQGS--AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
VS +E +++ QG + STR+ TKV QGIA+GR+VDLT YD+L EL
Sbjct: 709 -VSEQEKPCQTSLPLSRDVQGKVQSVSTRSCTKVHKQGIALGRSVDLTKFNNYDELIAEL 767
Query: 581 EKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+++FE G+L P+ W +V+TDDEGDMML GDD W EFC MV+KI+IY+ EEV+ M
Sbjct: 768 DQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIYIYTREEVQRM 824
>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
Length = 946
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/411 (61%), Positives = 307/411 (74%), Gaps = 20/411 (4%)
Query: 2 AYVEPNFG-------------CSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYF 48
Y EPN G S+S G LY ELW ACAGPLV VPR ERV+YF
Sbjct: 23 GYSEPNDGGVSRSVAEGQKGHSSVSGAGKDFETALYTELWHACAGPLVTVPRERERVFYF 82
Query: 49 PQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQT 108
PQGHIEQ+EASTNQ Q P++DLPSKILCRV++++L AE +TDEV+AQ+TL PE +Q
Sbjct: 83 PQGHIEQVEASTNQVSDQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQD 142
Query: 109 E-PRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQE 167
E + + P PP+ VHSFCK LTASDTSTHGGFSVLR+HA ECLP LDM+ PTQE
Sbjct: 143 ETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQE 202
Query: 168 LAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVR 227
L AKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVR
Sbjct: 203 LVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVR 262
Query: 228 RLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEA 285
R QQ ++PSSVISS SMHLGVLATA HA T T+F VYYKPRTS +FI+ ++Y+E+
Sbjct: 263 RAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMES 322
Query: 286 VHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQR 344
V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D ++W SKWR LK++WDE +T+ R
Sbjct: 323 VKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPR 382
Query: 345 PERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPAS--ASAFWYQGSTQ 393
P+RVSPW+IEP V LN P + KRPRS +P+S +S +GS++
Sbjct: 383 PDRVSPWKIEPAVTPPALN-PLPVPRPKRPRSNMVPSSPDSSVLTREGSSK 432
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGD 612
V QGIA+GR+VDLT YD+L EL+++FE G+L P+ W +V+TDDEGDMML GD
Sbjct: 786 VHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGD 845
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNM 636
D W EFC MV+KI+IY+ EEV+ M
Sbjct: 846 DPWQEFCGMVRKIYIYTREEVQRM 869
>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
Length = 840
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/358 (66%), Positives = 286/358 (79%), Gaps = 5/358 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR ERV+YFPQGHIEQ+EAST+Q Q P+++LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
++ L AE ETDEV+AQITL PE +Q E + P PP++ VHSFCK LTASDTSTHG
Sbjct: 101 NVHLKAEPETDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR Q ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E++ +++GMRFKMRFEGE++PE+RFTGTI+G D
Sbjct: 281 TMFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCED 340
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
++W SKWR LK++WDE +T+ RPE+VSPW+IEP +A LN P + KRPRS
Sbjct: 341 ADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALN-PLPMTRPKRPRS 397
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 9/187 (4%)
Query: 473 GCWLFGIDLKHNSNTAAPLG--RKVVDPT-TGTSGVKGSARAASDFDASQNQDLKEVKRG 529
C LFGI L N P+G R +++ S V S + + K +
Sbjct: 635 NCKLFGISLVKNPAIPDPVGLNRNMMNEADVMHSNVHQIHSIESGLKSELPRGSKLADKS 694
Query: 530 MA-DVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG 588
+A + K Q + S R+ TKV QGIA+GR+VDL+ YD+L EL+++FE G
Sbjct: 695 VAISEADKLQQTCKSQGTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGG 754
Query: 589 QL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIAS-- 645
+L P+ W +V+TDDEGDMML GDD W EFC MV+KIFIY+ EEV+ M S +
Sbjct: 755 ELLAPKKNWLIVYTDDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKMNPGSLNLKGDE 814
Query: 646 --SVEGE 650
SVEGE
Sbjct: 815 NPSVEGE 821
>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
Length = 839
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/358 (66%), Positives = 286/358 (79%), Gaps = 5/358 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR ERV+YFPQGHIEQ+EAST+Q Q P+++LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
++ L AE +TDEV+AQITL PE +Q E + P PP++ VHSFCK LTASDTSTHG
Sbjct: 101 NVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR Q ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
TLF VYYKPRT S+FI+ ++Y+E++ +++GMRFKMRFEGE++PE+RFTGTI+G D
Sbjct: 281 TLFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCED 340
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
++W SKWR LK++WDE +T+ RPE+VSPW+IEP +A LN P + KRPRS
Sbjct: 341 ADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALN-PLPMTRPKRPRS 397
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 106/196 (54%), Gaps = 28/196 (14%)
Query: 473 GCWLFGIDLKHNSNTAAPLGRK--------VVDPT-----TGTSGVKGSARAASDFDASQ 519
C LFGI L N P+G V+ P + SG+K D
Sbjct: 635 NCKLFGISLVKNPAIPDPVGLNRNMMNEADVMHPNVHQIHSSESGLKSELPRVLKLD--- 691
Query: 520 NQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDE 579
K V AD ++T QG++A R+ TKV QGIA+GR+VDL+ YD+L E
Sbjct: 692 ----KSVAISEAD-KLQQTCKSQGTSA--RSCTKVHKQGIALGRSVDLSRFNNYDELVAE 744
Query: 580 LEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
L+++FE G+L+ P+ W +V+TDDEGDMML GDD W EFC MV+KIFIY+ EEV+ M
Sbjct: 745 LDQLFEFGGELQAPKKNWLIVYTDDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKMNP 804
Query: 639 SSKPIAS----SVEGE 650
S + SVEGE
Sbjct: 805 GSLNLKGDENPSVEGE 820
>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 826
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/376 (65%), Positives = 289/376 (76%), Gaps = 12/376 (3%)
Query: 17 GPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
G +GD LY ELW ACAGPLV VPR G+ VYYFPQGHIEQ+EAS NQ +Q L+DLPS
Sbjct: 15 GTSTGDPLYDELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLYDLPS 74
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQ-------TEPRSPDQCLPEPPKQTVHSF 128
K+LCRV+++EL AE +TDEVYAQ+ L PE +Q TE S P + V SF
Sbjct: 75 KLLCRVLNVELKAEADTDEVYAQVMLMPEPEQSEAAATTTEKSSSATGGTMPARPAVRSF 134
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLHG EWRF+HIFRGQP
Sbjct: 135 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQP 194
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLL +GWS FV+SKRLVAGDAF+FLRGE+GELRVGVRR Q S++ SSVISS SMHL
Sbjct: 195 RRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHL 254
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
GVLATA HA+ T T+F VYYKPRT S+FII +KY E+V + +S+G RFKMRFEGE++P
Sbjct: 255 GVLATAWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAP 314
Query: 307 ERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
E+RFTGTIVG + + WP S WRSLK++WDE +T+ RP+RVSPWEIEP +S P+N
Sbjct: 315 EQRFTGTIVGSDNLDQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP-ASSPPVN-PL 372
Query: 367 PAVKSKRPRSIDIPAS 382
P ++KR R PAS
Sbjct: 373 PLSRAKRSRPNVPPAS 388
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 86/124 (69%), Gaps = 9/124 (7%)
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR 593
S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ YD+L EL+KMF+ G+L
Sbjct: 682 SSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFVDYDELTAELDKMFDFDGELMSS 740
Query: 594 DK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIAS-----SV 647
+K W +V+TD+EGDMML GDD W EFC MV+KI IY+ EEV+ M +SKP + SV
Sbjct: 741 NKNWQIVYTDNEGDMMLVGDDPWEEFCSMVRKICIYTKEEVQKM--NSKPSDARKEEGSV 798
Query: 648 EGEG 651
EG+G
Sbjct: 799 EGDG 802
>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
Length = 718
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/358 (66%), Positives = 286/358 (79%), Gaps = 5/358 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR ERV+YFPQGHIEQ+EAST+Q Q P+++LPSKILCRV+
Sbjct: 41 LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVI 100
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
++ L AE +TDEV+AQITL PE +Q E + P PP++ VHSFCK LTASDTSTHG
Sbjct: 101 NVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHG 160
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR Q ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 221 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTG 280
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
TLF VYYKPRT S+FI+ ++Y+E++ +++GMRFKMRFEGE++PE+RFTGTI+G D
Sbjct: 281 TLFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCED 340
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
++W SKWR LK++WDE +T+ RPE+VSPW+IEP +A LN P + KRPRS
Sbjct: 341 ADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALN-PLPMTRPKRPRS 397
>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/365 (66%), Positives = 291/365 (79%), Gaps = 7/365 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L+RELW ACAGPLV VPR ERV+YFPQGHIEQ+EASTNQ P++DLP KILCRV+
Sbjct: 36 LFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVI 95
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEV+AQ+TL PE +Q E + P PP+ VHSFCK LTASDTSTHG
Sbjct: 96 NVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 155
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRFKHIFRGQPRRHLL +GWS FV
Sbjct: 156 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFV 215
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 216 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 275
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRTS +FI+ ++Y+E++ + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 276 TIFTVYYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 335
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN-LAQPAVKSKRPRSI 377
++W SKWR LK++WDE + RPERVSPW+IEP +A LN L+ P + KRPRS
Sbjct: 336 SDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMP--RPKRPRSN 393
Query: 378 DIPAS 382
+P+S
Sbjct: 394 AVPSS 398
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDD 603
+ S R+ TKV +GIA+GR+VDLT GYD+L EL+++FE G+L K W +VFTD+
Sbjct: 709 SGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLSTKKDWLIVFTDN 768
Query: 604 EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
EGDMML GDD W EFC MV+KI+IY EE++ M+
Sbjct: 769 EGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMS 802
>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/365 (66%), Positives = 291/365 (79%), Gaps = 7/365 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L+RELW ACAGPLV VPR ERV+YFPQGHIEQ+EASTNQ P++DLP KILCRV+
Sbjct: 36 LFRELWHACAGPLVTVPREKERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVI 95
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEV+AQ+TL PE +Q E + P PP+ VHSFCK LTASDTSTHG
Sbjct: 96 NVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 155
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRFKHIFRGQPRRHLL +GWS FV
Sbjct: 156 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFV 215
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 216 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTG 275
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRTS +FI+ ++Y+E++ + +S+GMRFKMRFEGE++PE+RFTGT+VG+ D
Sbjct: 276 TIFTVYYKPRTSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTVVGIED 335
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN-LAQPAVKSKRPRSI 377
++W SKWR LK++WDE + RPERVSPW+IEP +A LN L+ P + KRPRS
Sbjct: 336 SDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMP--RPKRPRSN 393
Query: 378 DIPAS 382
+P+S
Sbjct: 394 AVPSS 398
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDD 603
+ S R+ TKV +GIA+GR+VDLT GYD+L EL+++FE G+L K W +V+TD+
Sbjct: 709 SGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLSTKKDWLIVYTDN 768
Query: 604 EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
EGDMML GDD W EFC MV KI+IY EE++ M+
Sbjct: 769 EGDMMLVGDDPWQEFCAMVCKIYIYPKEEIQKMS 802
>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
Length = 769
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/358 (66%), Positives = 284/358 (79%), Gaps = 5/358 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV VPR GERV+YFPQGH+EQ+EASTNQ Q P +DL +KILCRV+
Sbjct: 10 LYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILCRVI 69
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-PKQTVHSFCKILTASDTSTHG 141
++ L AE +TDEV+AQ+TL PE Q E + + + P P+ VHSFCK LTASDTSTHG
Sbjct: 70 NVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTSTHG 129
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 130 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFV 189
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SK+LVAGDAF+FLRGENGELRVGVRR Q S+ PSSVISS SMHLGVLATA HAV T
Sbjct: 190 SSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVSTG 249
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRTS +FII ++Y+EAV + +S+GMRFKM+FEGE++PE+RFTGT++G D
Sbjct: 250 TIFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTVIGTED 309
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
+WPGSKWR LK++WDE ++V RPE VSPW IE + LN P +SKRPR+
Sbjct: 310 ADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLN-PLPVSRSKRPRA 366
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 24/213 (11%)
Query: 452 RPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG-----VK 506
+P + EEV KS+ C LFGI L + + +P G ++
Sbjct: 544 KPQPLYVQEEV---VKSKGDGNCKLFGISL---------ISKPAANPMHRPQGEIQLTME 591
Query: 507 GSARAASDFDASQNQDLK--EVKRGMADVSRKETQNKQGS--AASTRTRTKVQMQGIAVG 562
AR +S+ ++ E ++ + ++ +++ Q + STR+ KV QGIAVG
Sbjct: 592 NPARHPEQSKSSKYMEIGGFEHEKPFQALEQQLSRDDQSKLHSGSTRSCIKVHKQGIAVG 651
Query: 563 RAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKM 621
R+VDLT GY +L EL+++FE G+L +K W +VFTDDEGDMML GDD WPEFC M
Sbjct: 652 RSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEGDMMLVGDDPWPEFCSM 711
Query: 622 VKKIFIYSTEEVKNMATSSKPIASSVEGEGTAI 654
V+KIF+Y+ EE++ M +P+ V T +
Sbjct: 712 VRKIFVYTREEIQRM--DPRPLNPKVRENPTVL 742
>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
Length = 853
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/381 (63%), Positives = 298/381 (78%), Gaps = 10/381 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L+ ELW ACAGPLV VPR GE+V+YFPQGHIEQ+EASTNQ + L++LP KILC V+
Sbjct: 38 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPP-----KQTVHSFCKILTASD 136
++EL AE +TDEVYAQ+TL PE+ Q E S ++ +P P + VHSFCK LTASD
Sbjct: 98 NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLATA H
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277
Query: 257 AVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
AV T T+F VYYKPRTS +F++ ++Y+E++ +S+GMRFKMRFEGE++PE+RFTGTI
Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 337
Query: 315 VGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSK 372
VG+GD WP SKWRSLK++WDE +++ RPERVSPW+IEP V+ P+N K
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 397
Query: 373 RPRSIDIPASASAFWYQGSTQ 393
RP + +PA +SA + +T+
Sbjct: 398 RPNATALPADSSAIAKEAATK 418
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 105/198 (53%), Gaps = 26/198 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK---VVDPTTGTSGV-------- 505
V H +V++ K + C LFGI L + + PL V D T T G
Sbjct: 624 VAHGDVQKAKGA----SCKLFGIHLDSPAKSE-PLKSPSSVVYDGTPQTPGATEWRRPDV 678
Query: 506 ------KGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
++A D Q + E K SR + QG STR+ KV QGI
Sbjct: 679 TEVEKCSDPSKAMKPLDTPQPDSVPE-KPSSQQASRNMSCKSQG--VSTRSCKKVHKQGI 735
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEF 618
A+GR+VDLT GY++L EL+ MF+ G+L+ P+ +W VV+TD+EGDMML GDD W EF
Sbjct: 736 ALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEF 795
Query: 619 CKMVKKIFIYSTEEVKNM 636
C MV KIFIY+ EEV+ M
Sbjct: 796 CDMVHKIFIYTREEVQRM 813
>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
Length = 852
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/381 (63%), Positives = 298/381 (78%), Gaps = 10/381 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L+ ELW ACAGPLV VPR GE+V+YFPQGHIEQ+EASTNQ + L++LP KILC V+
Sbjct: 37 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPP-----KQTVHSFCKILTASD 136
++EL AE +TDEVYAQ+TL PE+ Q E S ++ +P P + VHSFCK LTASD
Sbjct: 97 NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 276
Query: 257 AVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
AV T T+F VYYKPRTS +F++ ++Y+E++ +S+GMRFKMRFEGE++PE+RFTGTI
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 336
Query: 315 VGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSK 372
VG+GD WP SKWRSLK++WDE +++ RPERVSPW+IEP V+ P+N K
Sbjct: 337 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 396
Query: 373 RPRSIDIPASASAFWYQGSTQ 393
RP + +PA +SA + +T+
Sbjct: 397 RPNATALPADSSAIAKEAATK 417
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 105/198 (53%), Gaps = 26/198 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK---VVDPTTGTSGV-------- 505
V H +V++ K + C LFGI L + + PL V D T T G
Sbjct: 623 VAHGDVQKAKGA----SCKLFGIHLDSPAKSE-PLKSPSSVVYDGTPQTPGATEWRRPDV 677
Query: 506 ------KGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
++A D Q + E K SR + QG STR+ KV QGI
Sbjct: 678 TEVEKCSDPSKAMKPLDTPQPDSVPE-KPSSQQASRNMSCKSQG--VSTRSCKKVHKQGI 734
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEF 618
A+GR+VDLT GY++L EL+ MF+ G+L+ P+ +W VV+TD+EGDMML GDD W EF
Sbjct: 735 ALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEF 794
Query: 619 CKMVKKIFIYSTEEVKNM 636
C MV KIFIY+ EEV+ M
Sbjct: 795 CDMVHKIFIYTREEVQRM 812
>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
Length = 836
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/381 (63%), Positives = 298/381 (78%), Gaps = 10/381 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L+ ELW ACAGPLV VPR GE+V+YFPQGHIEQ+EASTNQ + L++LP KILC V+
Sbjct: 21 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 80
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPP-----KQTVHSFCKILTASD 136
++EL AE +TDEVYAQ+TL PE+ Q E S ++ +P P + VHSFCK LTASD
Sbjct: 81 NVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 140
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 141 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 200
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLATA H
Sbjct: 201 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 260
Query: 257 AVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
AV T T+F VYYKPRTS +F++ ++Y+E++ +S+GMRFKMRFEGE++PE+RFTGTI
Sbjct: 261 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTI 320
Query: 315 VGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSK 372
VG+GD WP SKWRSLK++WDE +++ RPERVSPW+IEP V+ P+N K
Sbjct: 321 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 380
Query: 373 RPRSIDIPASASAFWYQGSTQ 393
RP + +PA +SA + +T+
Sbjct: 381 RPNATALPADSSAIAKEAATK 401
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 105/198 (53%), Gaps = 26/198 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK---VVDPTTGTSGV-------- 505
V H +V++ K + C LFGI L + + PL V D T T G
Sbjct: 607 VAHGDVQKAKGA----SCKLFGIHLDSPAKSE-PLKSPSSVVYDGTPQTPGATEWRRPDV 661
Query: 506 ------KGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
++A D Q + E K SR + QG STR+ KV QGI
Sbjct: 662 TEVEKCSDPSKAMKPLDTPQPDSVPE-KPSSQQASRNMSCKSQG--VSTRSCKKVHKQGI 718
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEF 618
A+GR+VDLT GY++L EL+ MF+ G+L+ P+ +W VV+TD+EGDMML GDD W EF
Sbjct: 719 ALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEF 778
Query: 619 CKMVKKIFIYSTEEVKNM 636
C MV KIFIY+ EEV+ M
Sbjct: 779 CDMVHKIFIYTREEVQRM 796
>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/358 (66%), Positives = 284/358 (79%), Gaps = 5/358 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV VPR GERV+YFPQGH+EQ+EASTNQ Q P +DL +KILCRV+
Sbjct: 10 LYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILCRVI 69
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-PKQTVHSFCKILTASDTSTHG 141
++ L AE +TDEV+AQ+TL PE Q E + + + P P+ VHSFCK LTASDTSTHG
Sbjct: 70 NVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTSTHG 129
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 130 GFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFV 189
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SK+LVAGDAF+FLRGENGELRVGVRR Q S+ PSSVISS SMHLGVLATA HAV T
Sbjct: 190 SSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVSTG 249
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRTS +FII ++Y+EAV + +S+GMRFKM+FEGE++PE+RFTGT++G D
Sbjct: 250 TIFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTVIGTED 309
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
+WPGSKWR LK++WDE ++V RPE VSPW IE + LN P +SKRPR+
Sbjct: 310 ADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLN-PLPVSRSKRPRA 366
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 24/215 (11%)
Query: 452 RPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG-----VK 506
+P + EEV KS+ C LFGI L + + +P G ++
Sbjct: 544 KPQPLYVQEEV---VKSKGDGNCKLFGISL---------ISKPAANPMHRPQGEIQLTME 591
Query: 507 GSARAASDFDASQNQDLK--EVKRGMADVSRKETQNKQGS--AASTRTRTKVQMQGIAVG 562
AR +S+ ++ E ++ + ++ +++ Q + STR+ KV QGIAVG
Sbjct: 592 NPARHPEQSKSSKYMEIGGFEHEKPFQALEQQLSRDDQSKLHSGSTRSCIKVHKQGIAVG 651
Query: 563 RAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKM 621
R+VDLT GY +L EL+++FE G+L +K W +VFTDDEGDMML GDD WPEFC M
Sbjct: 652 RSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEGDMMLVGDDPWPEFCSM 711
Query: 622 VKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISL 656
V+KIF+Y+ EE++ M +P+ +A+SL
Sbjct: 712 VRKIFVYTREEIQRM--DPRPLNPKSWRHPSAVSL 744
>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
Length = 853
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/381 (63%), Positives = 297/381 (77%), Gaps = 10/381 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L+ ELW ACAGPLV VPR GE+V+YFPQGHIEQ+EASTNQ + L++LP KILC V+
Sbjct: 38 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPP-----KQTVHSFCKILTASD 136
++EL AE +TDEVYAQ+TL PE Q E S ++ +P P + VHSFCK LTASD
Sbjct: 98 NVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLATA H
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 277
Query: 257 AVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
AV T T+F VYYKPRTS +F++ ++Y+E++ +S+GMRFKMRFEGE++PE+RFTGTI
Sbjct: 278 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTI 337
Query: 315 VGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSK 372
VG+GD WP SKWRSLK++WDE +++ RPERVSPW+IEP V+ P+N K
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 397
Query: 373 RPRSIDIPASASAFWYQGSTQ 393
RP + +PA +SA + +T+
Sbjct: 398 RPNATALPADSSAIAKEAATK 418
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 105/198 (53%), Gaps = 26/198 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK---VVDPTTGTSG--------- 504
V H +V++ K + C LFGI L + + PL V D T T G
Sbjct: 624 VAHGDVQKAKGA----SCKLFGIHLDSPAKSE-PLKSPSSVVYDGTPQTPGATEWRRPDV 678
Query: 505 -----VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
++A D Q + E K SR + QG STR+ KV QGI
Sbjct: 679 TEVEKCSDPSKAMKPLDTPQPDSVPE-KPSSQQASRNMSCKSQG--VSTRSCKKVHKQGI 735
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEF 618
A+GR+VDLT GY++L EL+ MF+ G+L+ P+ +W VV+TD+EGDMML GDD W EF
Sbjct: 736 ALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEF 795
Query: 619 CKMVKKIFIYSTEEVKNM 636
C MV KIFIY+ EEV+ M
Sbjct: 796 CDMVHKIFIYTREEVQRM 813
>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
Length = 817
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/384 (62%), Positives = 292/384 (76%), Gaps = 9/384 (2%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAS 59
+ +V CSL GG G+ D +Y ELW CAGPLV VPR G++VYYFPQGHIEQ+EAS
Sbjct: 49 LTWVWLGLCCSLLLAGGGGTEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEAS 108
Query: 60 TNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE 119
TNQ +DLP KILC V+++EL AE + DEVYAQ+TL PE+ E S ++
Sbjct: 109 TNQVAEQHMQFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPAS 168
Query: 120 PP----KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHG 175
PP + VHSFCK LTASDTSTHGGFSVLR+HA ECLPPLDMT PTQEL AKDLHG
Sbjct: 169 PPAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHG 228
Query: 176 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSS 235
EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGDAF+FLRG++GELRVGVRR QQ++
Sbjct: 229 VEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQAN 288
Query: 236 MPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVG 293
+PSSVISS SMHLGVLATA HAV T T+F VYYKPRTS +F++ ++Y+E++ + +G
Sbjct: 289 VPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIG 348
Query: 294 MRFKMRFEGEDSPERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWE 352
MRFKMRFEGE++PE+RFTGTIVG D + W SKWR LK++WDE +++ RPERVSPW+
Sbjct: 349 MRFKMRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQ 408
Query: 353 IEPFVASAPLNLAQPAVKSKRPRS 376
IEP V+ P+N P + KRPRS
Sbjct: 409 IEPAVSPPPIN-PLPVHRPKRPRS 431
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 474 CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 533
C LFGI L + + PL P+ T + D D S + G V
Sbjct: 670 CKLFGIHLDSPAKSE-PLKSP---PSVATPAAEKWMADGIDADKSPEPHKTPKQLGATQV 725
Query: 534 SRKETQNKQGS--------AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
+ Q S STR+ KV QG+A+GR+VDLT GY +L EL++MF+
Sbjct: 726 DPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFD 785
Query: 586 IQGQLRPRDK-WAVVFTDDEGDMMLAGDDQW 615
G+L+ K W VV+TD EGDMML GDD W
Sbjct: 786 FNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 816
>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
Length = 882
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/393 (61%), Positives = 299/393 (76%), Gaps = 14/393 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L+ ELW ACAGPLV VP+ G++V+YFPQGHIEQ+EASTNQ + L++LP KILC V+
Sbjct: 67 LFSELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLYNLPWKILCEVM 126
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP-----KQTVHSFCKILTASDT 137
++EL AE +TDEVYAQ+TL PE+ Q E + + + P + VHSFCK LTASDT
Sbjct: 127 NVELKAESDTDEVYAQLTLLPESKQQEENASTEEVSAAPSAAPVRPRVHSFCKTLTASDT 186
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 187 STHGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQSGW 246
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLATA HA
Sbjct: 247 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHA 306
Query: 258 VKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
V T T+F VYYKPRTS +F++ ++Y+E++ +S+GMRFKMRFEGE++PE+RFTGTIV
Sbjct: 307 VNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTIV 366
Query: 316 GVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
G+GD W SKWRSLK++WDE +++ RPERVSPW+IEP V S P P ++KRP
Sbjct: 367 GMGDSDPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAV-SPPPINPLPVPRTKRP 425
Query: 375 RSIDIPASASAFWYQGSTQSHDITQVVGATEGQ 407
R I ++ + STQ+ ++ V A Q
Sbjct: 426 RPNVIASTTDS-----STQAKEVAPKVAAETQQ 453
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 515 FDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYD 574
DA + E SR + +G +A R+ KV QGIA+GR+VDLT GY
Sbjct: 722 LDAPYADSVPEKHLSCQQASRNASGKSRGGSA--RSCKKVHKQGIALGRSVDLTKFNGYM 779
Query: 575 DLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
+L EL+ MF+ G L+ +K W VV+TD EGDMML GDD W EFC +V KIFIY+ EEV
Sbjct: 780 ELVSELDDMFDFNGDLKSSNKEWMVVYTDHEGDMMLVGDDPWSEFCNIVHKIFIYTREEV 839
Query: 634 KNMA 637
+ MA
Sbjct: 840 QRMA 843
>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
Length = 850
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/365 (64%), Positives = 281/365 (76%), Gaps = 15/365 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW CAGPLV VPR G++VYYFPQGHIEQ+EASTNQ +DLP KILC V+
Sbjct: 39 MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVM 98
Query: 83 HIELLAEQETDEVYAQITLHPETDQTE--------PRSPDQCLPEPPKQTVHSFCKILTA 134
++EL AE + DEVYAQ+TL PE+ Q E P SP L P VHSFCK LTA
Sbjct: 99 NVELKAEPDNDEVYAQLTLLPESKQPEENGSSEEMPASPPAALARP---RVHSFCKTLTA 155
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSVLR+HA ECLPPLDMT PTQEL AKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 156 SDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQ 215
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
+GWS FV++KRLVAGDAF+FLRG++GELRVGVRR QQ+++PSSVISS SMHLGVLATA
Sbjct: 216 SGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATA 275
Query: 255 AHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
HAV T T+F VYYKPRTS +F++ ++Y+E++ + +GMRFKMRFEGE++PE+RFTG
Sbjct: 276 WHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTG 335
Query: 313 TIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKS 371
TIVG D + W SKWR LK++WDE +++ RPERVSPW+IEP V+ P+N P +
Sbjct: 336 TIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN-PLPVHRP 394
Query: 372 KRPRS 376
KRPRS
Sbjct: 395 KRPRS 399
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 99/191 (51%), Gaps = 20/191 (10%)
Query: 474 CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 533
C LFGI L + + PL P+ T + D D S + G V
Sbjct: 638 CKLFGIHLDSPAKSE-PLKSP---PSVATPAAEKWMADGIDADKSPEPHKTPKQLGATQV 693
Query: 534 SRKETQNKQGS--------AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
+ Q S STR+ KV QG+A+GR+VDLT GY +L EL++MF+
Sbjct: 694 DPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFD 753
Query: 586 IQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM---ATSSK 641
G+L+ K W VV+TD EGDMML GDD W EFC MV KIF+Y+ EEV+ M A +S+
Sbjct: 754 FNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSR 813
Query: 642 P----IASSVE 648
P +A+S E
Sbjct: 814 PEDSGLANSTE 824
>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
Length = 888
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/447 (57%), Positives = 324/447 (72%), Gaps = 18/447 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LYRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSKILCRV+
Sbjct: 86 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCRVI 145
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
+++L AE ++DEVYAQITL PE Q E + P PP + VHSFCK LTASDTSTHG
Sbjct: 146 NVDLKAEVDSDEVYAQITLLPEAIQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 205
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 206 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFV 265
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++ SSVISS SMHLGVLATA HA+ T
Sbjct: 266 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVSSSVISSHSMHLGVLATAWHAISTG 325
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 326 TMFSVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 385
Query: 320 FS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W SKWRSLK++WDE +++ RP+RVSPW++EP +A L+ P + KRPRS
Sbjct: 386 SDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKLEPALAPPALSPV-PMPRPKRPRSNI 444
Query: 379 IPAS--ASAFWYQGSTQSHD-------ITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
P+S +S +GS + +++V+ E + ++ + +S+++
Sbjct: 445 APSSPDSSVLIREGSAMGNKDPLPASGLSRVLQGQEHPTLRTKHTETVECDAPESSVVWQ 504
Query: 430 NSTDDHRI----VAAQSVLSGYASSGR 452
+S DD ++ +A + SSGR
Sbjct: 505 SSADDDKVDVVSASASRRYENWMSSGR 531
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 109/210 (51%), Gaps = 26/210 (12%)
Query: 460 EEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQ 519
E VE KS C LFGI L +N N + P + G + S +
Sbjct: 669 EMVEDTAKSRDG-NCRLFGIPLVNNVNVT----ESTMSPRNNFNDTAGLTQMTS----PK 719
Query: 520 NQDLKEVKRGMADVSRKETQNKQGSAA-------------STRTRTKVQMQGIAVGRAVD 566
QDL + +G + + Q + A S+R+ TKVQ QGIA+GR+VD
Sbjct: 720 VQDLSDQSKGSKSTNDQREQGRPFQANHHPHPKDVHTKTHSSRSCTKVQKQGIALGRSVD 779
Query: 567 LTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKI 625
L+ + Y++L EL++MFE G+L P+ W +V+TDDE DMML GDD W EFC MV+KI
Sbjct: 780 LSKFQNYEELIAELDRMFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCGMVRKI 839
Query: 626 FIYSTEEVKNM---ATSSKPIASSVEGEGT 652
IY+ EEV+ M S + +V GEG+
Sbjct: 840 SIYTKEEVRKMNPGTLSCRSEEEAVVGEGS 869
>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/336 (69%), Positives = 275/336 (81%), Gaps = 4/336 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR G+RV+YFPQGHIEQ+EASTNQ Q PL++L KILCRVV
Sbjct: 52 LYNELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLYNLLPKILCRVV 111
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEP-RSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEV+AQ+TL PE +Q E + P PP+ VHSFCK LTASDTSTHG
Sbjct: 112 NVQLKAEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPPPPRFHVHSFCKTLTASDTSTHG 171
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 172 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 231
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 232 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 291
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
TLF VYYKPRTS +FI+ ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 292 TLFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 351
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+W SKWR LK++WDE +T+ RPERVSPW+IE
Sbjct: 352 ADPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIE 387
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 113/213 (53%), Gaps = 25/213 (11%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVV---DPTTGTSGVKGSARAAS 513
V+ +E + GK E + C LFGI LK + A + +P + V S
Sbjct: 626 VLMQEHDSGKSLEGN--CKLFGIPLKISKPVAPEAAGTTITMNEPLSHIQPVSHQLTFES 683
Query: 514 DFDASQNQDLKEVKRGMADVSRKE---------TQNKQGSA--ASTRTRTKVQMQGIAVG 562
D + Q++ K M D + E T++ G A STR+ TKV QGIA+G
Sbjct: 684 DQKSEQSKGSK-----MTDENENEKPFQAGHLRTKDNHGKAQNGSTRSCTKVHKQGIALG 738
Query: 563 RAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKM 621
R+VDL YD+L EL+++FE G+L P+ W +V+TDDE DMML GDD W EF M
Sbjct: 739 RSVDLAKFNNYDELIAELDRLFEFNGELMAPQKNWLIVYTDDEDDMMLVGDDPWQEFVGM 798
Query: 622 VKKIFIYSTEE---VKNMATSSKPIASSVEGEG 651
V+KI IY+ EE +K A +SK + + ++ EG
Sbjct: 799 VRKIVIYTKEEAQKIKPGALNSKGVENPMDMEG 831
>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
Length = 849
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/361 (64%), Positives = 281/361 (77%), Gaps = 8/361 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW CAGPLV VPR G++VYYFPQGHIEQ+EASTNQ +DLP KILC V+
Sbjct: 39 MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVM 98
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP----KQTVHSFCKILTASDTS 138
++EL AE + DEVYAQ+TL PE+ E S ++ PP + VHSFCK LTASDTS
Sbjct: 99 NVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTS 158
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSVLR+HA ECLPPLDMT PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 159 THGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWS 218
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV++KRLVAGDAF+FLRG++GELRVGVRR QQ+++PSSVISS SMHLGVLATA HAV
Sbjct: 219 VFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAV 278
Query: 259 KTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
T T+F VYYKPRTS +F++ ++Y+E++ + +GMRFKMRFEGE++PE+RFTGTIVG
Sbjct: 279 NTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVG 338
Query: 317 VGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
D + W SKWR LK++WDE +++ RPERVSPW+IEP V+ P+N P + KRPR
Sbjct: 339 NVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN-PLPVHRPKRPR 397
Query: 376 S 376
S
Sbjct: 398 S 398
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 99/191 (51%), Gaps = 20/191 (10%)
Query: 474 CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 533
C LFGI L + + PL P+ T + D D S + G V
Sbjct: 637 CKLFGIHLDSPAKSE-PLKSP---PSVATPAAEKWMADGIDADKSPEPHKTPKQLGATQV 692
Query: 534 SRKETQNKQGS--------AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
+ Q S STR+ KV QG+A+GR+VDLT GY +L EL++MF+
Sbjct: 693 DPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFD 752
Query: 586 IQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM---ATSSK 641
G+L+ K W VV+TD EGDMML GDD W EFC MV KIF+Y+ EEV+ M A +S+
Sbjct: 753 FNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSR 812
Query: 642 P----IASSVE 648
P +A+S E
Sbjct: 813 PEDSGLANSTE 823
>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
Length = 840
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/431 (58%), Positives = 309/431 (71%), Gaps = 32/431 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV VPR GERVYYFPQGHIEQ+EASTNQ Q P++DL SKILCRV+
Sbjct: 34 LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKILCRVI 93
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++L A+ +TDEV+AQITL PE +Q E + P P+ VHSFCK LTASDTSTHG
Sbjct: 94 NVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHG 153
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLP LDM+ PTQ+L AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 154 GFSVLRRHAEECLPELDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 213
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLR E ELRVGVRR QQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 214 SSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 272
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPR S +FI+ ++Y+E+V +S+GM F+MRFEGE++PE+R+TGTIVG+ D
Sbjct: 273 TMFTVYYKPRISPAEFIVPFDQYMESVKSNYSIGMGFEMRFEGEEAPEQRYTGTIVGIED 332
Query: 320 FSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
Q WP SKWR LK++WDE +TV RPERVSPW+IEP +A LN P + KRPRS
Sbjct: 333 ADPQRWPDSKWRCLKVRWDETSTVPRPERVSPWKIEPALAPLALN-PLPLSRPKRPRSNM 391
Query: 379 IPAS------------------ASAFWYQGSTQSHDITQVVG------ATEGQSSESQVV 414
+P+S +SA + Q + + + G + E ++E VV
Sbjct: 392 VPSSPDSSVLTREGSFKVNVDPSSATGFSRVLQGQEFSTLRGNFAERDSNEFDTAEKSVV 451
Query: 415 RP--MRQKEID 423
RP + K+ID
Sbjct: 452 RPSSLDDKKID 462
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 82/119 (68%), Gaps = 6/119 (5%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDD 603
+ S+R+ TKV QGIA+GR+VDL+ Y++L EL+++FE G+L P+ W +++TDD
Sbjct: 710 SGSSRSCTKVHKQGIALGRSVDLSKFNNYEELIAELDRLFEFGGELMTPKKNWLIIYTDD 769
Query: 604 EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEG-EGTAISLDSELK 661
EGD+ML GDD W EFC MV+KIFIY+ EEV+ M KP +S +G E +I +E K
Sbjct: 770 EGDIMLVGDDPWKEFCGMVRKIFIYTREEVQKM----KPGSSLSKGDENLSIGEGTEAK 824
>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
Length = 857
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/381 (62%), Positives = 295/381 (77%), Gaps = 10/381 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L+ ELW ACAGPLV VPR GE+ +YFPQGHIEQ+EASTNQ + L++LP KILC V+
Sbjct: 37 LFTELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPP-----KQTVHSFCKILTASD 136
++EL AE +TDEVYAQ+TL PE + E S ++ +P P + VHSFCK LTASD
Sbjct: 97 NVELKAEPDTDEVYAQLTLLPELKRQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLATA H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWH 276
Query: 257 AVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
AV T T+F VYYKPRTS +F++ ++Y+E++ +S+GMRFKMRFE E++PE+RFTGTI
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFESEEAPEQRFTGTI 336
Query: 315 VGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSK 372
VG+GD WP SKWRSLK++WDE +++ RPERVSPW+IEP V+ P+N K
Sbjct: 337 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPRTKRL 396
Query: 373 RPRSIDIPASASAFWYQGSTQ 393
RP + +PA +SA + +T+
Sbjct: 397 RPNATALPADSSAIAKEAATK 417
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 104/199 (52%), Gaps = 23/199 (11%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK--VVDPTTGTSG---------- 504
V H +V++ K + C LFGI L + + V D T T G
Sbjct: 623 VAHGDVQKAKGA----SCKLFGIHLDSPAKSEPSKSPSSVVYDGTPQTPGATEWRRPDVT 678
Query: 505 ----VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNK--QGSAASTRTRTKVQMQG 558
++A D Q + E S++ ++N + STR+ KV QG
Sbjct: 679 EVEKCSDPSKAMKPLDTPQPDSVPEKPSSQQASSQQASRNMSCKSQGVSTRSCKKVHKQG 738
Query: 559 IAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPE 617
IA+GR+VDLT GY++L EL+ MF+ G+L+ P+ +W VV+TD+EGDMML GDD W E
Sbjct: 739 IALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIE 798
Query: 618 FCKMVKKIFIYSTEEVKNM 636
FC MV KIFIY+ EEV+ M
Sbjct: 799 FCDMVHKIFIYTREEVQRM 817
>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
Length = 751
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/361 (64%), Positives = 281/361 (77%), Gaps = 8/361 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW CAGPLV VPR G++VYYFPQGHIEQ+EASTNQ +DLP KILC V+
Sbjct: 39 MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVM 98
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP----KQTVHSFCKILTASDTS 138
++EL AE + DEVYAQ+TL PE+ E S ++ PP + VHSFCK LTASDTS
Sbjct: 99 NVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTS 158
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSVLR+HA ECLPPLDMT PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 159 THGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWS 218
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV++KRLVAGDAF+FLRG++GELRVGVRR QQ+++PSSVISS SMHLGVLATA HAV
Sbjct: 219 VFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAV 278
Query: 259 KTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
T T+F VYYKPRTS +F++ ++Y+E++ + +GMRFKMRFEGE++PE+RFTGTIVG
Sbjct: 279 NTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVG 338
Query: 317 VGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
D + W SKWR LK++WDE +++ RPERVSPW+IEP V+ P+N P + KRPR
Sbjct: 339 NVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPIN-PLPVHRPKRPR 397
Query: 376 S 376
S
Sbjct: 398 S 398
>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
Length = 787
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/392 (61%), Positives = 300/392 (76%), Gaps = 14/392 (3%)
Query: 17 GPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
G SGD LY+ELW ACAGPLV VPR GE V+YFPQGHIEQ+EASTNQ Q P +DLP
Sbjct: 12 GKDSGDALYKELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQAADEQMPAYDLPG 71
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
KILCRVV+++L AE +TDEV+AQITL P+++Q E + LP P + VHSFCK LTAS
Sbjct: 72 KILCRVVNVQLKAEPDTDEVFAQITLLPQSEQDENLVEKKALPAPTRPRVHSFCKTLTAS 131
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSVLR+HA ECLPPLDM+L P QEL AKDL G EWRF+HIFRGQPRRHLL +
Sbjct: 132 DTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRFRHIFRGQPRRHLLQS 191
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV++K+LVAGDAF+FLRGE GELRVGVRR Q ++PSS +SS SMH+G+LATA
Sbjct: 192 GWSLFVSAKKLVAGDAFIFLRGETGELRVGVRRAMRQSCNVPSSFMSSHSMHIGILATAW 251
Query: 256 HAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
HAV T T+F VYYKPRTS +FII ++KY+E+V + F++GMRFKMRFE E++PE+RF GT
Sbjct: 252 HAVSTGTMFTVYYKPRTSPAEFIIPMDKYMESVKNNFTIGMRFKMRFEAEEAPEQRFLGT 311
Query: 314 IVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
++GV ++WP S+WR LK++WDE +++ RP+RVSPWE+EP A APL+ P + K
Sbjct: 312 VIGVEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVEP--ALAPLD-PLPTCRLK 368
Query: 373 RPRS-IDIPASASAF------WYQGSTQSHDI 397
R RS + +P++ S+ W Q+ DI
Sbjct: 369 RSRSNMPMPSADSSAVMKKDNWLSRDPQNQDI 400
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 17/187 (9%)
Query: 467 KSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDF--DASQNQDLK 524
KS+ C LFGI L ++ P+ VD +G ASD D + L+
Sbjct: 584 KSKEDGNCKLFGISL---ISSPVPMENATVD-NNFMHRPQGLFNLASDKLQDFGSDLSLQ 639
Query: 525 EVKR-GMADVSRKETQNK--------QGSAASTRTR-TKVQMQGIAVGRAVDLTALKGYD 574
++K+ D + + + K +G + TR KV QGIAVGR VDLT GY+
Sbjct: 640 QLKKPKFFDSTIRCEEEKLFMASHFIEGKLQNGSTRCVKVHKQGIAVGRYVDLTKFNGYN 699
Query: 575 DLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
+L EL+++FE G+L +K W + FTDDEGDMML GDD W EFC MV++IF+Y+ EE+
Sbjct: 700 ELIAELDRIFEFSGELITSNKNWLIAFTDDEGDMMLVGDDPWEEFCSMVRRIFVYTREEI 759
Query: 634 KNMATSS 640
M S
Sbjct: 760 NRMNQRS 766
>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 841
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/373 (64%), Positives = 282/373 (75%), Gaps = 18/373 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKILCRV 81
L+ ELW+ACAGPLV VP GERV+Y PQGHIEQ+EASTNQ Q PL++LP KI C+V
Sbjct: 29 LFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 88
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ------TEPRSPDQCLPE---PPKQT----VHSF 128
+++EL AE +TDEVYAQ+TL PE Q S D+ E PP T VHSF
Sbjct: 89 MNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSF 148
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQP
Sbjct: 149 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQP 208
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHL
Sbjct: 209 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHL 268
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
GVLATA HAV T T+F VYYKPRT S+F++ + Y E++ S+GMRFKM FEGE++
Sbjct: 269 GVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAA 328
Query: 307 ERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN-L 364
E+RFTGTIVGVGD W SKWRSLK++WDE A+V RP+RVSPW+IEP + +P+N L
Sbjct: 329 EQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPL 388
Query: 365 AQPAVKSKRPRSI 377
P K RP +
Sbjct: 389 PAPRTKRARPNVL 401
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 22/197 (11%)
Query: 452 RPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG------- 504
+P VI V++ K S C LFGI L ++ A + P+ G
Sbjct: 615 KPQPLVIDHNVQKAKGSS----CMLFGISL----DSPAKPELLISPPSVAFDGKLQQDAL 666
Query: 505 ----VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIA 560
++ D +Q+ +E + D + K Q+KQ + S+R+ KV QGIA
Sbjct: 667 EEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGT-KNIQSKQQNG-SSRSCKKVHKQGIA 724
Query: 561 VGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFC 619
+GR++DLT YD+L EL++MF+ G+L K W VV+TD+EGDMML GDD W EFC
Sbjct: 725 LGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFC 784
Query: 620 KMVKKIFIYSTEEVKNM 636
MV KIFIY+ EEV+ M
Sbjct: 785 NMVHKIFIYTREEVQKM 801
>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
Length = 335
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/317 (72%), Positives = 261/317 (82%), Gaps = 3/317 (0%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
S LYRELW ACAGPLV +PR ERVYYFPQGH+EQLEAS +Q L Q P F+LPSKILC
Sbjct: 19 SDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILC 78
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+VV++ L AE +TDEVYAQITL PE++Q E SPD LPEP + VHSFCK LTASDTST
Sbjct: 79 KVVNVVLRAESDTDEVYAQITLLPESNQNEVTSPDPPLPEPTRCNVHSFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSVLR+HA +CLPPLDM+ P QEL A DLHG +W F+HIFRGQPRRHLLTTGWS
Sbjct: 139 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV+SK+LVAGDAF+FLRGENGELRVGVRRL Q ++MPSSVISS SMHLGVLATA+HA+
Sbjct: 199 FVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 258
Query: 260 TSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
T TLF V+YKPRTS+ F++ LNKYLEA +H SVGMRFKMRFEGE+ PER F+GTIVG+
Sbjct: 259 TGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGL 318
Query: 318 GD-FSEQWPGSKWRSLK 333
GD S W S+WRSLK
Sbjct: 319 GDNASPGWANSEWRSLK 335
>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
Length = 813
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/369 (63%), Positives = 283/369 (76%), Gaps = 14/369 (3%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKILCR 80
+LY ELWKACAGPLV VP GERV+YFPQGHIEQ+EASTNQ Q PL++LP KI C+
Sbjct: 19 ELYAELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCK 78
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP--------KQTVHSFCKIL 132
V+++EL AEQ+TDEVYAQ+TL PE Q E S + E P + VHSFCK L
Sbjct: 79 VMNVELKAEQDTDEVYAQLTLLPEK-QNEHASTEGEKEEVPAAVPAVHERPRVHSFCKTL 137
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL +DLHG EWRF+HIFRGQP+RHL
Sbjct: 138 TASDTSTHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKRHL 197
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
L +GWS FV++KRLVA DAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLA
Sbjct: 198 LQSGWSVFVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLA 257
Query: 253 TAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
TA HAV T ++F VYYKPRTS +F++ + Y E++ S+GMRFKMRFEGE++ E+RF
Sbjct: 258 TAWHAVNTGSMFTVYYKPRTSPAEFVVPCDLYYESMKRNHSIGMRFKMRFEGEEAAEQRF 317
Query: 311 TGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN-LAQPA 368
TGTIVG+GD W SKWRSLK++WDE ++V RP+RVSPW+IEP V+ +N L P
Sbjct: 318 TGTIVGIGDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVSPLSVNPLQAPR 377
Query: 369 VKSKRPRSI 377
K RP +I
Sbjct: 378 NKRSRPNAI 386
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 507 GSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVD 566
G+++ S D +Q+ + + +R Q STR+ KV QGIA+GR+VD
Sbjct: 662 GTSKLVSPLDENQSDSAMAKHQTCPEATRNIQSKLQ---CSTRSCKKVHKQGIALGRSVD 718
Query: 567 LTALKGYDDLFDELEKMFEIQGQLRPR-DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKI 625
LT YD+L EL++MF+ G+L+ + W VV+TD + DMML GDD W EFC +V KI
Sbjct: 719 LTRFTCYDELIAELDRMFDFGGELKGSCENWMVVYTDSDNDMMLVGDDPWNEFCDVVHKI 778
Query: 626 FIYSTEEVKNM 636
FIY+ EEV M
Sbjct: 779 FIYTREEVSKM 789
>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 840
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 281/372 (75%), Gaps = 17/372 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKILCRV 81
L+ ELW+ACAGPLV VP GERV+Y PQGHIEQ+EASTNQ Q PL++LP KI C+V
Sbjct: 29 LFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 88
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPR-----SPDQCLPE---PPKQT----VHSFC 129
+++EL AE +TDEVYAQ+TL PE S D+ E PP T VHSFC
Sbjct: 89 MNVELKAEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFC 148
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQPR
Sbjct: 149 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPR 208
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLG
Sbjct: 209 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLG 268
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
VLATA HAV T T+F VYYKPRT S+F++ + Y E++ S+GMRFKM FEGE++ E
Sbjct: 269 VLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAE 328
Query: 308 RRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN-LA 365
+RFTGTIVGVGD W SKWRSLK++WDE A+V RP+RVSPW+IEP + +P+N L
Sbjct: 329 QRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLP 388
Query: 366 QPAVKSKRPRSI 377
P K RP +
Sbjct: 389 APRTKRARPNVL 400
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 22/197 (11%)
Query: 452 RPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG------- 504
+P VI V++ K S C LFGI L ++ A + P+ G
Sbjct: 614 KPQPLVIDHNVQKAKGSS----CMLFGISL----DSPAKPELLISPPSVAFDGKLQQDAL 665
Query: 505 ----VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIA 560
++ D +Q+ +E + D + K Q+KQ + S+R+ KV QGIA
Sbjct: 666 EEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGT-KNIQSKQQNG-SSRSCKKVHKQGIA 723
Query: 561 VGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFC 619
+GR++DLT YD+L EL++MF+ G+L K W VV+TD+EGDMML GDD W EFC
Sbjct: 724 LGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFC 783
Query: 620 KMVKKIFIYSTEEVKNM 636
MV KIFIY+ EEV+ M
Sbjct: 784 NMVHKIFIYTREEVQKM 800
>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
Length = 839
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/370 (62%), Positives = 283/370 (76%), Gaps = 18/370 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKILCRV 81
L+ ELWKACAGPL VP GE+VYYFPQGHIEQ+EASTNQ Q PL++LP KI C++
Sbjct: 27 LFVELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPCKL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRS--------PDQCLPEPPKQT----VHSFC 129
++IEL AE +TDEVYAQ+TL P+ Q E S ++ +P P +HSFC
Sbjct: 87 MNIELKAEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPRIHSFC 146
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQPR
Sbjct: 147 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQPR 206
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q+++PSSVISS SMHLG
Sbjct: 207 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLG 266
Query: 250 VLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
VLATA HAV T ++F VYYKPRTS +F++ ++Y E++ +S+GMRFKMRFEGE++ E
Sbjct: 267 VLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAE 326
Query: 308 RRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
+RFTGTIVG+G W SKWRSLK++WDE ++V RPERVSPW+IEP ++ +P+N
Sbjct: 327 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAISPSPVNPL- 385
Query: 367 PAVKSKRPRS 376
V+ KR RS
Sbjct: 386 -PVRFKRSRS 394
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 110/207 (53%), Gaps = 25/207 (12%)
Query: 448 ASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPL---------GRKVVDP 498
+SS RP VI +V++ K + L FGI L + + PL G+ P
Sbjct: 599 SSSIRPQPLVIGNDVQKTKGTSFKL----FGIPLG-SPEKSEPLVSPPSVAYDGKLQTSP 653
Query: 499 T--------TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT 550
+ G ++ FD Q+ + E + + + + QNK S+ STR+
Sbjct: 654 SEKGNQLDIVGVDNCSDPSKTVKPFDGPQSDSITENNQPCPEAT-QNIQNKVQSS-STRS 711
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMML 609
KV QG A+GR++DLT YD+L EL++MF+ G+L+ P W VV+TD+EGD+ML
Sbjct: 712 CKKVHKQGSALGRSIDLTKFTCYDELIAELDQMFDFDGELKNPCKNWLVVYTDNEGDIML 771
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNM 636
GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 772 VGDDPWNEFCDMVHKIFIYTREEVERM 798
>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
Length = 832
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/414 (57%), Positives = 298/414 (71%), Gaps = 21/414 (5%)
Query: 15 QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDL 73
+G G L+ ELWKACAGPL VP GE+VYY PQGHIEQ+EASTNQ Q PL++L
Sbjct: 15 RGCGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNL 74
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT--- 124
P KI C++++IEL E +TDEVYAQ+TL P+ Q E S P P
Sbjct: 75 PWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGP 134
Query: 125 -VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHI 183
+HSFCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HI
Sbjct: 135 HIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHI 194
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISS 243
FRGQPRRHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q+++PSSVISS
Sbjct: 195 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISS 254
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFE 301
+MHLGVLATA HAV T ++F VYYKPRTS +F++ ++Y E++ +S+GMRFKMRFE
Sbjct: 255 HNMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFE 314
Query: 302 GEDSPERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
GE++ E+RFTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +
Sbjct: 315 GEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--S 372
Query: 361 PLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
P ++ V+ KR RS S +A ST + ++T V A Q+S ++ +
Sbjct: 373 PCHVNPLPVRFKRSRS-----SVNALPSDVSTVTREVTSKVMADSQQNSLTRAL 421
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWA 597
QNK S+ STR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P W
Sbjct: 695 QNKVQSS-STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWL 753
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
VV+TD+EGD+ML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 754 VVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERM 792
>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
Length = 830
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/410 (58%), Positives = 296/410 (72%), Gaps = 21/410 (5%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKI 77
G L+ ELWKACAGPL VP GE+VYY PQGHIEQ+EASTNQ Q PL++LP KI
Sbjct: 17 GKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKI 76
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT----VHS 127
C++++IEL E +TDEVYAQ+TL P+ Q E S P P +HS
Sbjct: 77 PCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHS 136
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQ
Sbjct: 137 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQ 196
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q+++PSSVISS +MH
Sbjct: 197 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMH 256
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HAV T ++F VYYKPRTS +F++ ++Y E++ +S+GMRFKMRFEGE++
Sbjct: 257 LGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 316
Query: 306 PERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
E+RFTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +P ++
Sbjct: 317 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--SPCHV 374
Query: 365 AQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
V+ KR RS S +A ST + ++T V A Q+S ++ +
Sbjct: 375 NPLPVRFKRSRS-----SVNALPSDVSTVTREVTSKVMADSQQNSLTRAL 419
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWA 597
QNK S+ STR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P W
Sbjct: 693 QNKVQSS-STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWL 751
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
VV+TD+EGD+ML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 752 VVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERM 790
>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 826
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/372 (62%), Positives = 284/372 (76%), Gaps = 21/372 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKILCRV 81
L+ ELWKACAGPL VP GE+VYYFPQGHIEQ+EASTN HQ PL++LP KI C++
Sbjct: 28 LFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKL 87
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSP--------DQCLPEPPKQT-----VHSF 128
+++EL AE +TDEVYAQ+TL P+ Q E S ++ +P P T +HSF
Sbjct: 88 MNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSF 147
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQP
Sbjct: 148 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQP 207
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q+++PSSVISS SMHL
Sbjct: 208 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHL 267
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
GVLATA HAV T ++F VYYKPRTS +F++ +Y E++ +S+GMRF+MRFEGE++
Sbjct: 268 GVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAA 327
Query: 307 ERRFTGTIVG--VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
E+RFTGTIVG V D S W SKWRSLK++WDE ++V RPERVSPW+IEP V+ +P+N
Sbjct: 328 EQRFTGTIVGICVSDPS-GWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP 386
Query: 365 AQPAVKSKRPRS 376
V+ KR RS
Sbjct: 387 L--PVRFKRSRS 396
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 538 TQNKQGSAASTRTRT--KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRD 594
TQN Q S+ TR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P
Sbjct: 666 TQNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCR 725
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
W VV+TD+EGDMML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 726 NWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERM 767
>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 707
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/410 (58%), Positives = 296/410 (72%), Gaps = 21/410 (5%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKI 77
G L+ ELWKACAGPL VP GE+VYY PQGHIEQ+EASTNQ Q PL++LP KI
Sbjct: 17 GKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKI 76
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT----VHS 127
C++++IEL E +TDEVYAQ+TL P+ Q E S P P +HS
Sbjct: 77 PCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHS 136
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQ
Sbjct: 137 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQ 196
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q+++PSSVISS +MH
Sbjct: 197 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMH 256
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HAV T ++F VYYKPRTS +F++ ++Y E++ +S+GMRFKMRFEGE++
Sbjct: 257 LGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEA 316
Query: 306 PERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
E+RFTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +P ++
Sbjct: 317 AEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--SPCHV 374
Query: 365 AQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
V+ KR RS S +A ST + ++T V A Q+S ++ +
Sbjct: 375 NPLPVRFKRSRS-----SVNALPSDVSTVTREVTSKVMADSQQNSLTRAL 419
>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
gi|224028731|gb|ACN33441.1| unknown [Zea mays]
gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 813
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/372 (62%), Positives = 284/372 (76%), Gaps = 21/372 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKILCRV 81
L+ ELWKACAGPL VP GE+VYYFPQGHIEQ+EASTN HQ PL++LP KI C++
Sbjct: 28 LFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKL 87
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSP--------DQCLPEPPKQT-----VHSF 128
+++EL AE +TDEVYAQ+TL P+ Q E S ++ +P P T +HSF
Sbjct: 88 MNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSF 147
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQP
Sbjct: 148 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQP 207
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q+++PSSVISS SMHL
Sbjct: 208 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHL 267
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
GVLATA HAV T ++F VYYKPRTS +F++ +Y E++ +S+GMRF+MRFEGE++
Sbjct: 268 GVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAA 327
Query: 307 ERRFTGTIVG--VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
E+RFTGTIVG V D S W SKWRSLK++WDE ++V RPERVSPW+IEP V+ +P+N
Sbjct: 328 EQRFTGTIVGICVSDPS-GWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP 386
Query: 365 AQPAVKSKRPRS 376
V+ KR RS
Sbjct: 387 L--PVRFKRSRS 396
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 538 TQNKQGSAASTRTRT--KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRD 594
TQN Q S+ TR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P
Sbjct: 666 TQNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCR 725
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
W VV+TD+EGDMML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 726 NWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERM 767
>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
Length = 813
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/372 (62%), Positives = 284/372 (76%), Gaps = 21/372 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKILCRV 81
L+ ELWKACAGPL VP GE+VYYFPQGHIEQ+EASTN HQ PL++LP KI C++
Sbjct: 28 LFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKL 87
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSP--------DQCLPEPPKQT-----VHSF 128
+++EL AE +TDEVYAQ+TL P+ Q E S ++ +P P T +HSF
Sbjct: 88 MNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSF 147
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL A+DLHG EWRF+HIFRGQP
Sbjct: 148 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRGQP 207
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q+++PSSVISS SMHL
Sbjct: 208 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHL 267
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
GVLATA HAV T ++F VYYKPRTS +F++ +Y E++ +S+GMRF+MRFEGE++
Sbjct: 268 GVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAA 327
Query: 307 ERRFTGTIVG--VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
E+RFTGTIVG V D S W SKWRSLK++WDE ++V RPERVSPW+IEP V+ +P+N
Sbjct: 328 EQRFTGTIVGICVSDPS-GWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP 386
Query: 365 AQPAVKSKRPRS 376
V+ KR RS
Sbjct: 387 L--PVRFKRSRS 396
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 538 TQNKQGSAASTRTRT--KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRD 594
TQN Q S+ TR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P
Sbjct: 666 TQNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCR 725
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
W VV+TD+EGDMML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 726 NWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERM 767
>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
Length = 570
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/624 (41%), Positives = 356/624 (57%), Gaps = 107/624 (17%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQG+IE +EAST +EL +P+ DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE YA+ITL P+T Q + ++ P V+SF K+LTASD S +G
Sbjct: 84 AIHLKVENNSDETYAKITLMPDTTQVVIPTQNENQFRP---LVNSFTKVLTASDISANGV 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV +KHA ECLPPLDM+ P QEL A DLHG +W F+H +RG P+RHLLTTGW+ F T
Sbjct: 141 FSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTT 200
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LV GD VF+RGE GELRVG+RR HQQ ++PSS++S M GV+A+A HA
Sbjct: 201 SKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQC 260
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+FIV YKPR+SQFI+ +K+L+AV++ F+VG RF MRFEG+D ERR+ GTI+GV +FS
Sbjct: 261 MFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSNFSP 320
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDIPA 381
W S WRSL++QWDE A+ RP +VSPWEIE + + LN+ + + +K+KR R ++
Sbjct: 321 HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPA--LNVPRSSFLKNKRLREVNEFE 378
Query: 382 SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQ 441
A + S V+PM ++ ++ ++
Sbjct: 379 DA-------------------MNPSRLLMSYPVQPMPKRNYNNQMVT------------- 406
Query: 442 SVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTG 501
++E ++A LFG+ L P+ + D +
Sbjct: 407 -------------------QIEENITTKAGTNFRLFGVSLATPPVIKDPIEQIGSDISKL 447
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI-- 559
T G K Q+Q L+ S + Q+KQ S STRT TKV ++ I
Sbjct: 448 TEGKK----------FGQSQTLR---------SPTKIQSKQFS--STRTCTKVSIRSIYS 486
Query: 560 ---------------------------AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
+GRAVDL+ L GYD L ELEK+F+++GQL+
Sbjct: 487 YSLYMKLFLIILTSHNFDMEQVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT 546
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWP 616
R++W ++FT + D ML GDD WP
Sbjct: 547 RNQWKIIFTGSDEDEMLVGDDPWP 570
>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
Length = 767
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/569 (43%), Positives = 349/569 (61%), Gaps = 44/569 (7%)
Query: 55 QLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPD 114
+EAST +EL +P+ D PSK+ CRV+ I+L E +DE YA+ITL P+T Q + +
Sbjct: 112 HVEASTREELNELQPICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQN 171
Query: 115 QCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLH 174
Q P V+SF K+LTASDTS HGGFSV +KHA ECLPPLDM+ PTQE+ A DLH
Sbjct: 172 QNQFRP---LVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLH 228
Query: 175 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS 234
G +WRF+HI+RG +RHLLT GW+ F TSK+LV GD VF+RGE GELRVG+RR HQQ
Sbjct: 229 GNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQG 288
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGM 294
++PSS++S +SM G++A+A HA +FIV YKPR+SQFI+ +K+L+ V++ F+VG
Sbjct: 289 NIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRSSQFIVSYDKFLDVVNNKFNVGS 348
Query: 295 RFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
RF MRFEG+D ERR GTI+GV DFS W S+WRSL++QWDE A+ RP +VSPW+IE
Sbjct: 349 RFTMRFEGDDFSERRSFGTIIGVSDFSPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIE 408
Query: 355 PFVASAPLNLAQPA-VKSKRPRSID-IPASASAFWYQGSTQSHDITQVVGATEGQSSESQ 412
+ N+++ + +K+KR R ++ I +S+S TQ +I Q AT S
Sbjct: 409 HLTPWS--NVSRSSFLKNKRSREVNEIGSSSSHLLPPTLTQGQEIGQQSMATPMNIS--- 463
Query: 413 VVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASL 472
+R ++ I ++ R++ + V + + +E + A
Sbjct: 464 ----LRYRD-----ITEDAMTPSRLLMSYPV----QPMAKLNYNNVVTPIEENITTNAVA 510
Query: 473 GCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMAD 532
LFG+ L S P+ + ++ + T +E K G +
Sbjct: 511 SFRLFGVSLATPSVIKDPVEQIGLEISRLT---------------------QEKKFGQSQ 549
Query: 533 VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
+ R T+ + +STRT TKVQMQG+ +GRAVDL+ L GYD L ELEK+F+++GQL+
Sbjct: 550 ILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQA 609
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKM 621
R++W + FT++E D ML G+D WPEFC M
Sbjct: 610 RNQWEIAFTNNEEDKMLVGEDPWPEFCNM 638
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIE 54
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIE 55
>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 269/616 (43%), Positives = 359/616 (58%), Gaps = 66/616 (10%)
Query: 40 RNGERVYYFPQGHIEQLEASTNQELTHQEPL-FDLPSKILCRVVHIELLAEQETDEVYAQ 98
R +++Y G T+ ++H P P + RV+ I+L E+ +DE YA+
Sbjct: 6 RGSNKIFYALDG--------THHTISHTLPCKAKQPPPLQRRVIAIQLKVERNSDETYAE 57
Query: 99 ITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLD 158
ITL P T Q + ++ P V+SF K+LTASDTS HGGFSV RK A ECLPPLD
Sbjct: 58 ITLMPNTTQVVIPTQNENQFRP---LVNSFTKVLTASDTSAHGGFSVPRKLAIECLPPLD 114
Query: 159 MTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGE 218
M+ P QEL DLHG +WRFKH +RG PRRHLLTTGW+ F+TSK+LVAGD VFLRGE
Sbjct: 115 MSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTGWNAFITSKKLVAGDVIVFLRGE 174
Query: 219 NGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKP-------- 270
GELRV +RR +QQ ++PSS+IS +SM GV+A+A HA +FIV YKP
Sbjct: 175 TGELRVSIRRARYQQGNIPSSLISIESMRHGVIASAKHAFDNQCMFIVVYKPRFIFCVCI 234
Query: 271 --RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSK 328
R+SQFI+ +K+L+AV++ F+VG RF MRFE E+ ERR+ GTI+GV DFS W S+
Sbjct: 235 SIRSSQFIVNYDKFLDAVNNKFNVGSRFTMRFEEENFSERRYFGTIIGVSDFSPHWKCSE 294
Query: 329 WRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASASAFWY 388
WRSLK+QWDE A+ RP++VSPWEI+ S+ + L +K+KR R F
Sbjct: 295 WRSLKVQWDEFASFPRPDKVSPWEIKHSTPSSNV-LPSSMLKNKRSRE---------FNE 344
Query: 389 QGSTQSHDITQVVGATEGQS-SESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGY 447
GS+ SH + ++ T+GQ + + PM I ++ST +L Y
Sbjct: 345 IGSSSSHLLPPIL--TQGQEIGQPSMTSPMNVPLSYRDAIEDDSTPSR-------LLMSY 395
Query: 448 ASSGRP----GNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTS 503
+ P N I +E + C +FG+ L P+ + DP S
Sbjct: 396 SVQTMPRLNYNNDQIVTPIEGNITNNGGASCRVFGVSLATPPVIKDPIEQIDSDPNLEIS 455
Query: 504 GVKGSARAASDFDASQNQDLKEVKRGMADV-SRKETQNKQGSAASTRTRTKVQMQGIAVG 562
+ +E G+ + S +E Q+KQ S STRT TKVQM G+ +G
Sbjct: 456 KLS-----------------QEKIFGLGQMRSTREIQSKQLS--STRTCTKVQMHGVTLG 496
Query: 563 RAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMV 622
RA+DL+ L GYD L ELEK+F+++GQL+ R++W +VFTD+E D ML GDD WPEFC MV
Sbjct: 497 RALDLSVLNGYDQLILELEKLFDLKGQLQNRNQWEIVFTDNEEDEMLVGDDPWPEFCNMV 556
Query: 623 KKIFIYSTEEVKNMAT 638
KKI IYS EEVKN +
Sbjct: 557 KKIIIYSKEEVKNFKS 572
>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
Length = 362
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/341 (65%), Positives = 269/341 (78%), Gaps = 11/341 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKILCRV 81
L+ ELWKACAGPL VP GERV+YFPQGHIEQ+EASTNQ Q PL++LP KI C+V
Sbjct: 22 LFVELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKV 81
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPP-----KQTVHSFCKILTA 134
+++EL AEQ+TDEVYAQ+TL PE Q E + ++ +P+ P + VHSFCK LTA
Sbjct: 82 MNVELKAEQDTDEVYAQLTLLPEKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKTLTA 141
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EW F+HIFRGQPRRHLL
Sbjct: 142 SDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRHLLQ 201
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
+GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q++++PSSVISS SMHLGVLATA
Sbjct: 202 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHSMHLGVLATA 261
Query: 255 AHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
H T T+F VYYKPRTS +F++ + + E++ S+GMRFKMRFEGE++ E+RFTG
Sbjct: 262 WHVANTGTMFTVYYKPRTSPAEFVVPRDWFDESLKRNHSIGMRFKMRFEGEEAAEQRFTG 321
Query: 313 TIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWE 352
TIVG+GD W SKWRSLK++WDE ++V RPERVSPW+
Sbjct: 322 TIVGIGDSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362
>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 624
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 280/669 (41%), Positives = 374/669 (55%), Gaps = 123/669 (18%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQEPLFDLPSKILCR 80
+L+ ELW+ACAGPLVE+P+ ERV+YF QGH+EQL+ T+ L Q +F +P+KILC+
Sbjct: 11 ELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILCK 70
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTE-PRSPDQCLPEPPKQTVHSFCKILTASDTST 139
AE ETDE+YAQITL PE DQ + P+ P+ L E + VHSFCKILT SDTST
Sbjct: 71 -------AETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTST 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSVLR+HA ECLP LDM++ TPTQEL KDLHG EWRFKHI+RGQPRRHLLTTGWST
Sbjct: 124 HGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FVTSK+L+AGDAFV+LR SQS +
Sbjct: 184 FVTSKKLIAGDAFVYLR-------------------------LSQSQY------------ 206
Query: 260 TSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
I+ LNKYLE+ F VGMRFKM FEG+D P ++F+GT+V GD
Sbjct: 207 ----------------IVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVDKGD 250
Query: 320 FSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL--AQPAVKSKRPR-- 375
S QW GS+W++LK++WDE + PERVS WEIEPF ASAP QP++K+KRPR
Sbjct: 251 LSPQWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPVQPSMKNKRPRET 310
Query: 376 --SIDIPA--SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINN-- 429
+DI A A FW G + H+ T V ++E + + + S+I N
Sbjct: 311 AEGLDIHALEPAQEFWLSGRPEQHEKTS-VSSSEPKHQVAWTSERAGYSAMSSSICQNSA 369
Query: 430 ---------NSTDDHRIVA--AQSVLSGYASSGR----PGNTVIHEEVERGKKSEASLGC 474
NS+ H + +Q + ++ R PG + H + K S + C
Sbjct: 370 VTGSWFKGFNSSGSHPSLPEISQKLFQVTSNDARVPPWPGLSAYHADEPSSKLSCNTALC 429
Query: 475 -------------------------WLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSA 509
LFG++L +++ ++A D T+ +G + SA
Sbjct: 430 SYQTEEVAPRFSNAVEEEKKEPGMFRLFGVNLINHARSSA-----TADKTSVGAG-ETSA 483
Query: 510 RAASDF-DASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLT 568
RAA F D++Q + + M + S +E Q+ Q + S R+R KVQM G V RAVDL
Sbjct: 484 RAAGSFEDSAQLSRVTKDHTHMVNGSPREIQSHQ--SCSGRSRIKVQMHGNDVCRAVDLG 541
Query: 569 ALKGYDDLFDELEKMFEIQG-QLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 627
L GY+ L E+ +MFEI+ + +++W V F +DE + M G W EFC+MV+KI I
Sbjct: 542 NLDGYEQLMGEVGEMFEIKDLGSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRKIVI 601
Query: 628 YSTEEVKNM 636
+S + +M
Sbjct: 602 HSIGDRGHM 610
>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/358 (60%), Positives = 276/358 (77%), Gaps = 5/358 (1%)
Query: 34 PLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPSKILCRVVHIELLAEQET 92
PLV VPR GE VYYFPQGHIEQ+EASTNQ Q+ P ++L KILCRVV+++L AE +T
Sbjct: 4 PLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLSPKILCRVVNVQLKAELDT 63
Query: 93 DEVYAQITLHPETDQTEPRSPDQCLPE-PPKQTVHSFCKILTASDTSTHGGFSVLRKHAT 151
DEV+AQ+ L PET Q ++ LP P + VHSFCK+LTASDTSTHGGFSVL++HA
Sbjct: 64 DEVFAQVILLPETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLKRHAD 123
Query: 152 ECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDA 211
ECLPPLDM+L P QEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV++K+LVAGDA
Sbjct: 124 ECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGDA 183
Query: 212 FVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR 271
F+FLRGE ELRVGVRR Q S +PSS+ISS SMH+G+LATA HAV T ++F VYYKPR
Sbjct: 184 FIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTVYYKPR 243
Query: 272 TS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS-EQWPGSK 328
TS +FII ++KY+E+V +++GMRFKMRFE +D+PE+RF+GT++GV + ++WP S
Sbjct: 244 TSPAEFIIPVDKYMESVKINYAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKKWPRSN 303
Query: 329 WRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASASAF 386
WR LK+ WDE + V RP+RVSPW++EP +A + ++ +K RP ++ A +SA
Sbjct: 304 WRCLKVHWDETSPVHRPDRVSPWKVEPALAPSMDPVSGCRLKRHRPNTVTSSADSSAL 361
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 114/232 (49%), Gaps = 20/232 (8%)
Query: 445 SGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAP--LGRKVVDPTTGT 502
S + S +P + + ER K + LFG+ L NS P + R D
Sbjct: 498 SPHPSRSKPKHLPFQQCNERTAKDD---NYKLFGVSLFRNSKALEPATIHRHSADKPQHQ 554
Query: 503 SGVK-------GSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGS--AASTRTRTK 553
V GS R ++ +E + + S +++ QG S R K
Sbjct: 555 INVASDHLQLLGSDRYLEQLKHPKHARCEE-QENIFQASSLYSKDVQGKPEGGSARRCVK 613
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDDEGDMMLAGD 612
V QG AVGR++DL+ GY++L EL+++FE G+L P W +VFTDDE DMML GD
Sbjct: 614 VHKQGTAVGRSLDLSKFNGYNELTAELDQIFEFNGELVAPNKDWLIVFTDDEDDMMLVGD 673
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSET 664
D W EFC MV++IFIY+ EE+ M +P + ++E EG + S D + E
Sbjct: 674 DPWQEFCSMVRRIFIYTKEEINRM----EPRSLNLEAEGNSRSTDQMVDLEN 721
>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/359 (63%), Positives = 281/359 (78%), Gaps = 7/359 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPSKILCRV 81
LY+ELW ACAGPLV VPR GE VYYFPQGHIEQ+EASTNQ Q+ P ++LP KILCRV
Sbjct: 4 LYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLPPKILCRV 63
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP-KQTVHSFCKILTASDTSTH 140
V+++L AE +TDEV+AQ+ L P +Q + LP PP + VHSFCK+LTASDTSTH
Sbjct: 64 VNVQLKAELDTDEVFAQVILLPVAEQDVDLVEKEDLPPPPARPRVHSFCKMLTASDTSTH 123
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSVLR+HA ECLPPLDM+L P QEL AKDLHG EWRF+HIFRGQPRRHLL +GWS F
Sbjct: 124 GGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLF 183
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
V++K+LVAGDAF+FLRGE ELRVGVRR Q S++PSSV+SS SMH+G+LAT HAV T
Sbjct: 184 VSAKKLVAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHIGILATVWHAVST 243
Query: 261 STLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
++F VYYKPRTS +FII ++KY E+V +++GMRFKM+FE E++PE+RF+GT++GV
Sbjct: 244 GSMFTVYYKPRTSPAEFIIPIDKYRESVKINYAIGMRFKMKFEAEEAPEQRFSGTVIGVE 303
Query: 319 DFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
+ ++WP SKWR LK++WDE + V RP+RVSPW+IE A AP P +SKR RS
Sbjct: 304 EADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIE--RALAPSLDPVPGCQSKRHRS 360
>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
Length = 733
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 269/658 (40%), Positives = 364/658 (55%), Gaps = 57/658 (8%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ+ AS + + FDL ILCRV++
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--------------PPKQTVHSFC 129
+ LLA +E DEVY Q+TL P + + L E P + T H FC
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFC 170
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A +C PPLD T P+QEL AKDLHG EWRF+HI+RGQPR
Sbjct: 171 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPR 230
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV+ K L++GDA +FLRGENGELR+G+RR ++ +P S++ +Q+
Sbjct: 231 RHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCAN 290
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
LA A+ T + F V+Y PR +QFII KY++++++ SVG RFKMRFE +DSPE
Sbjct: 291 DLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPE 350
Query: 308 RRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-A 365
RRF G +VG+ D S +WP SKWR L ++WD+ + Q ERVSPWEI+P V+ PL++ +
Sbjct: 351 RRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSDHQ--ERVSPWEIDPSVSLPPLSVQS 408
Query: 366 QPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQK-EIDS 424
P +K R P + + G D + +GQ E +RP K E
Sbjct: 409 SPRLKKLRTSLQAAPPNNAFTGRGGFMDFEDSVRSSKVLQGQ--EICSLRPPTSKPEYSL 466
Query: 425 TIINNNSTDDHRIVAAQSVLSG-YASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKH 483
+ + D+ QS S Y + + E +A++ L +
Sbjct: 467 GVWGKFNLSDNSFNTFQSPNSNFYHMASNSAQKMYFPRSEMHSTGQAAMM-------LSN 519
Query: 484 NSNTAAPLGRKVVDPTTGTSGVKGSA--RAASDFD------ASQNQDLKEVKRGMAD--V 533
+SN P + +P+ + V + R + D AS L R D V
Sbjct: 520 DSN--FPRESALFNPSAVGANVIRTKMERTSRSLDRESLHLASAPPTLGSNMRNSKDEHV 577
Query: 534 SRKETQNKQ-GSAASTRTRTKVQ-----------MQGIAVGRAVDLTALKGYDDLFDELE 581
+ T K G + +T T T VQ QG VGRA+DL+ L GY DL ELE
Sbjct: 578 NDNATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELE 637
Query: 582 KMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
++F ++G L+ DK W V++TD+E D+M+ GD W +FC V KI IY+ EEV+ M
Sbjct: 638 RLFSMEGLLKDPDKGWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTN 695
>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
Length = 733
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 269/658 (40%), Positives = 364/658 (55%), Gaps = 57/658 (8%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ+ AS + + FDL ILCRV++
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--------------PPKQTVHSFC 129
+ LLA +E DEVY Q+TL P + + L E P K T H FC
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTKSTPHMFC 170
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A +C PPLD T P+QEL AKDLHG EWRF+HI+RGQPR
Sbjct: 171 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPR 230
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV+ K L++GDA +FLRGENGELR+G+RR ++ +P S++ +Q+
Sbjct: 231 RHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCAN 290
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
LA A+ T + F V+Y PR +QFII KY++++++ SVG RFKMRFE +DSPE
Sbjct: 291 DLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPE 350
Query: 308 RRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-A 365
R+F G +VG+ D S +WP SKWR L ++WD+ + Q ERVSPWEI+P V+ PL++ +
Sbjct: 351 RKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSDHQ--ERVSPWEIDPSVSLPPLSVQS 408
Query: 366 QPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQK-EIDS 424
P +K R P + + G D + +GQ E +RP K E
Sbjct: 409 SPRLKKLRTSLQAAPPNNAFTGRGGFMDFEDSVRSSKVLQGQ--EICSLRPPTSKPEYSL 466
Query: 425 TIINNNSTDDHRIVAAQSVLSG-YASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKH 483
+ + D+ QS S Y + + E +A++ L +
Sbjct: 467 GVWGKFNLSDNSFNTFQSPNSNFYHMASNSAQKMYFPRSEMHSTGQAAMM-------LSN 519
Query: 484 NSNTAAPLGRKVVDPTTGTSGVKGSA--RAASDFD------ASQNQDLKEVKRGMAD--V 533
+SN P + +P+ + V + R + D AS L R D V
Sbjct: 520 DSN--FPRESALFNPSAVGANVIRTKMERTSRSLDRESLHLASAPPTLGSNMRNSKDEHV 577
Query: 534 SRKETQNKQ-GSAASTRTRTKVQ-----------MQGIAVGRAVDLTALKGYDDLFDELE 581
+ T K G + +T T T VQ QG VGRA+DL+ L GY DL ELE
Sbjct: 578 NDNATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELE 637
Query: 582 KMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
++F ++G L+ DK W V++TD+E D+M+ GD W +FC V KI IY+ EEV+ M
Sbjct: 638 RLFSMEGLLKDPDKGWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTN 695
>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
Length = 844
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/467 (52%), Positives = 309/467 (66%), Gaps = 25/467 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR E VYYFPQGHIEQ+EASTNQ Q P+++LPSKILCRV+
Sbjct: 52 LYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEASTNQLADQQMPVYNLPSKILCRVI 111
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++L AE +TDEV+AQ+TL PE Q E D P PP+ VHSFCK LTASDTSTHG
Sbjct: 112 NVQLKAEPDTDEVFAQVTLLPEPIQDENAVKKDPPQPPPPRFHVHSFCKTLTASDTSTHG 171
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPL +T + + GQPRRHLL +GWS FV
Sbjct: 172 GFSVLRRHADECLPPLVSINSTEFVRCLIDIIM--------LIPGQPRRHLLQSGWSVFV 223
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMHLGVLATA HA+ T
Sbjct: 224 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTG 283
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
TLF VYYKPRTS +FI+ ++Y+E+V + + +GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 284 TLFTVYYKPRTSPAEFIVPFDRYMESVKNNYCIGMRFKMRFEGEEAPEQRFTGTIVGIED 343
Query: 320 F-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
S++W SKWRSLK++WDE +T+ RP+RVSPW +EP +A LN P + KRPRS
Sbjct: 344 ADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVEPALAPPALN-PLPVPRPKRPRSNM 402
Query: 379 IPAS--ASAFWYQGSTQ-------SHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINN 429
+P+S +S GS++ ++V+ E + + + +++
Sbjct: 403 VPSSPDSSVLTRDGSSKVTIDPPPPSGYSRVLQGQEFSTLRGNFAESNESETAEKSVMWP 462
Query: 430 NSTDDHRIVAAQSVLSGYAS---SGRPGNTVIHEEVERGKKSEASLG 473
S DD +I + S G S SGRP T G +++S G
Sbjct: 463 PSVDDEKIDVSASRRHGSESWNLSGRPEPTYTDLLSGFGSNADSSHG 509
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 104/191 (54%), Gaps = 20/191 (10%)
Query: 460 EEVERGKKSEASLGCWLFGIDLKHNSNTAAPLG--RKVVDPTTGTSGVKGSARAASDFDA 517
+E + GK ++ + C LFGI L N P R +V+ T RA ++
Sbjct: 622 QEHDIGKSTDGN--CKLFGIPLFSNPVAPEPATSHRNMVNEPTTAHPQSHQPRA---LES 676
Query: 518 SQNQDLKEVKRGMADVSRKETQNKQG-----------SAASTRTRTKVQMQGIAVGRAVD 566
Q + V + MAD + E Q + G STR+ TKV QGIA+GR+VD
Sbjct: 677 DQRSEQPRVSK-MADDNEHEKQFQSGHLHTRDIQGKTQTGSTRSCTKVHKQGIALGRSVD 735
Query: 567 LTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKI 625
L YD+L EL+++FE G+L P+ W +V+TDDEGDMML GDD W EF MV+KI
Sbjct: 736 LAKFNNYDELIAELDRLFEFGGELISPKKNWLIVYTDDEGDMMLVGDDPWQEFVGMVRKI 795
Query: 626 FIYSTEEVKNM 636
FIY+ EEV+ M
Sbjct: 796 FIYTREEVQKM 806
>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
Length = 856
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/428 (53%), Positives = 292/428 (68%), Gaps = 18/428 (4%)
Query: 17 GPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
G +GD LY ELW ACAGPLV VPR G+ V+YFPQGHIEQ+EAS NQ Q L+DLPS
Sbjct: 9 GSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPS 68
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTE-------PRS-PDQCLPEPPKQTVHS 127
K+LCRV+++EL AEQ+TDEVYAQ+ L PE +Q E P S P Q P +
Sbjct: 69 KLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPGEGPSARR 128
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
++ A ++ + L + LP DMT + PTQEL AKDLH +WRF+HIFRGQ
Sbjct: 129 SPRLTPARTAASLYSAATL---MSASLPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQ 185
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR Q S++PSSVISSQSMH
Sbjct: 186 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMH 245
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HA+ T ++F VYYKPRT S+FII ++Y+E+V + +SVGMRF+MRFEGE++
Sbjct: 246 LGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEA 305
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
PE+RFTGTI+G + WP S WRSLK++WDEP+T+ RP+RVSPW+IEP +S P+N
Sbjct: 306 PEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVN-P 363
Query: 366 QPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDST 425
P + KRPR PAS + + T A Q+S V++ Q + S
Sbjct: 364 LPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNST--VLQGQEQMTLRSN 421
Query: 426 IINNNSTD 433
+ +N +D
Sbjct: 422 LTESNDSD 429
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ YD+L EL+KMFE G+L
Sbjct: 672 AQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGEL 730
Query: 591 RPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+K W +V+TD+EGDMML GDD W EFC +V+KI+IY+ EEV+ M + S
Sbjct: 731 VSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSN 782
>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
Length = 733
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/318 (65%), Positives = 254/318 (79%), Gaps = 5/318 (1%)
Query: 69 PLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPPKQTVHS 127
P++DL KILCRV+++ L AE +TDEV+AQ+TL PE +Q E + PP+ VHS
Sbjct: 2 PVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHS 61
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HIFRGQ
Sbjct: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQ 121
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV+SKRLVAGDAF+FLRGENGELRVGVRR QQ ++PSSVISS SMH
Sbjct: 122 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMH 181
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
LGVLATA HAV T T+F VYYKPRTS +FI+ ++Y+E++ + +++GMRFKMRFEGE++
Sbjct: 182 LGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEA 241
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
PE+RFTGTIVG+ D S++WP SKWR LK++WDE + + RPERVSPW+IEP +A LN
Sbjct: 242 PEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALN- 300
Query: 365 AQPAVKSKRPRSIDIPAS 382
P + KRPR+ +P+S
Sbjct: 301 PLPMPRPKRPRANVVPSS 318
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDD 603
+ S R+ TKV +GIA+GR+VDLT YD+L EL+++FE +G+L P+ W VVFTD+
Sbjct: 606 SGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDN 665
Query: 604 EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
EGDMML GDD W EFC MV+KI+IY EE++ M+
Sbjct: 666 EGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMS 699
>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 771
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/334 (62%), Positives = 261/334 (78%), Gaps = 10/334 (2%)
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR-SPDQCLPEPP-----KQ 123
L++LP KILC V+++EL AE +TDEVYAQ+TL PE+ Q E S ++ +P P +
Sbjct: 3 LYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRP 62
Query: 124 TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHI 183
VHSFCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ PTQEL AKDLHG EWRF+HI
Sbjct: 63 RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHI 122
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISS 243
FRGQPRRHLL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS
Sbjct: 123 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISS 182
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFE 301
SMHLGVLATA HAV T T+F VYYKPRTS +F++ ++Y+E++ +S+GMRFKMRFE
Sbjct: 183 HSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFE 242
Query: 302 GEDSPERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
GE++PE+RFTGTIVG+GD WP SKWRSLK++WDE +++ RPERVSPW+IEP V+
Sbjct: 243 GEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPP 302
Query: 361 PLNLAQPA-VKSKRPRSIDIPASASAFWYQGSTQ 393
P+N K RP + +PA +SA + +T+
Sbjct: 303 PVNPLPVPRTKRLRPNATALPADSSAIAKEAATK 336
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 105/198 (53%), Gaps = 26/198 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRK---VVDPTTGTSGV-------- 505
V H +V++ K + C LFGI L + + PL V D T T G
Sbjct: 542 VAHGDVQKAKGA----SCKLFGIHLDSPAKSE-PLKSPSSVVYDGTPQTPGATEWRRPDV 596
Query: 506 ------KGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
++A D Q + E K SR + QG STR+ KV QGI
Sbjct: 597 TEVEKCSDPSKAMKPLDTPQPDSVPE-KPSSQQASRNMSCKSQG--VSTRSCKKVHKQGI 653
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEF 618
A+GR+VDLT GY++L EL+ MF+ G+L+ P+ +W VV+TD+EGDMML GDD W EF
Sbjct: 654 ALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEF 713
Query: 619 CKMVKKIFIYSTEEVKNM 636
C MV KIFIY+ EEV+ M
Sbjct: 714 CDMVHKIFIYTREEVQRM 731
>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 620
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 259/643 (40%), Positives = 359/643 (55%), Gaps = 49/643 (7%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
+L ELW ACAGPL ++P V Y+PQGHIEQ+ A+ + + Q +LP+ +LCR+
Sbjct: 3 ELNCELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAADVYQASKQ--FSNLPAHLLCRI 60
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQT-VHSFCKILTASDTSTH 140
IEL A+ +TDEV+AQ+ L P Q E + P P +Q+ V SFCK LTASDTSTH
Sbjct: 61 SKIELQADPQTDEVFAQMDLTP---QYELSKETKDAPSPIQQSNVRSFCKTLTASDTSTH 117
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R+ A ECLP LD + P QEL AKDLHG +W F+HI+RG PRRHLLTTGWS F
Sbjct: 118 GGFSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGWSVF 177
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
V+ KRLVAGD +FLRGENG+LRVGVRR + QQ S+ SS ++HLGVLA A+HA
Sbjct: 178 VSQKRLVAGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAASHAATE 237
Query: 261 STLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
F V Y PRT S+F+I +KYL + + +VG RFKM+FE E+S ERR++GTIV +
Sbjct: 238 RLRFSVIYNPRTSPSEFVIPYHKYLRSEDNNLTVGSRFKMKFETEESTERRYSGTIVEIS 297
Query: 319 DFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV---KSKRP 374
D +WP S WRS+K++WDE A+ +R ERVSPWEIEP V + L P V +RP
Sbjct: 298 DVDPLKWPSSAWRSMKVEWDESAS-ERHERVSPWEIEPLVPIS--TLPTPPVGPRPKRRP 354
Query: 375 RSIDIPASASAFWYQGSTQSHD--ITQVVGATEGQSSESQVVRP--MRQKEIDSTIINNN 430
+ D S +++ G+ Q D +++ + S + + P + ++ T +NN+
Sbjct: 355 PTFDSSVSWASYMGTGAYQFRDPSCNKILPSWLTNSKSANLTSPPVPARSQLPITSLNND 414
Query: 431 STDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAP 490
VL + S TV E++ E C LFG +L
Sbjct: 415 P----------KVLHAHNLSFELWETVEQEQLNASPALEQQ--CKLFGFNLA-------- 454
Query: 491 LGRKVVDPTTGTSGVKGSARAASDFDASQNQDLK--EVKRGMADVSRKETQNKQGSAAST 548
+ V P + + + + + +S + + + GM T Q A
Sbjct: 455 -DKVVPTPVSSAPSLCEDSEGSGPWSSSDHTSSTSADTRVGMI-----VTGTYQPLVAPV 508
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDM 607
R+ TKV G VGR +DL + Y L L +F ++GQL K W +V+TD E D+
Sbjct: 509 RSGTKVYYSG-KVGRTIDLKKCESYAALRRMLASLFGLEGQLDDVTKGWQLVYTDHENDV 567
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
+L GDD W EFC V+ + + S ++ + P+ + E +
Sbjct: 568 LLVGDDPWEEFCNCVRSLKVLSPQDAAGQSVGKYPMTNCDEDD 610
>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
Length = 297
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/287 (76%), Positives = 240/287 (83%), Gaps = 2/287 (0%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQ-ELTHQEPLFDLPSKI 77
G LY ELWK CAGPLV+VP+ ERVYYFPQGH+EQLEAST Q +L +PLF LP KI
Sbjct: 5 GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKI 64
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPE-TDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
LC V+++ L AE++TDEVYAQITL P T+ EP SPD PE + VHSF K+LTASD
Sbjct: 65 LCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASD 124
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSVLRKHATECLPPLDMT TPTQEL A+D+HGY+W+FKHIFRGQPRRHLLTTG
Sbjct: 125 TSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTG 184
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WSTFVTSKRLVAGD FVFLRGENGELRVGVRR QQSSMPSSVISS SMHLGVLATA H
Sbjct: 185 WSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARH 244
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGE 303
A +T T+FIVYYKPRTSQFII LNKYLEA+ + FSVGMRFKMR GE
Sbjct: 245 ATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRLWGE 291
>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
Length = 912
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/396 (55%), Positives = 275/396 (69%), Gaps = 43/396 (10%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQL----------------------------- 56
ELW ACAGPL+ +P G V YFPQGH+EQL
Sbjct: 32 ELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFGFDSPLKFTPPVAPVLEKTAV 91
Query: 57 -----EASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR 111
AS Q + Q P ++LP +ILCRV+++ L A+QE DEVYAQ+TL PE++++E
Sbjct: 92 ASMHVAASIKQGVDQQTPPYNLPPQILCRVLNVNLHADQEMDEVYAQLTLVPESEKSEKC 151
Query: 112 SPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAK 171
+Q +P T H FCK LTASDTSTHGGFSV R+ A +C PPLD T P+QEL AK
Sbjct: 152 MEEQ-VPASTSCTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAK 210
Query: 172 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH 231
DLHG EWRF+HIFRGQPRRHLLTTGWS FV++KRLV+GDA +FLRGENGELR+G+RR +
Sbjct: 211 DLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDAVLFLRGENGELRLGIRRASR 270
Query: 232 QQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC 289
QQS SSV+SSQSMHLGVL AAHAV T ++F +++ PRTS +F+I +KY+++ +H
Sbjct: 271 QQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNPRTSPAEFVIPYHKYVKSFNHP 330
Query: 290 FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERV 348
++GMRFKMRFE ED+ ERR+TGTI G+GD +WPGSKWRSLK++WDE A +R ERV
Sbjct: 331 LAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARWPGSKWRSLKVEWDEHAANERQERV 390
Query: 349 SPWEIEPFVASAPLNL-AQPAVKSKR----PRSIDI 379
SPWEIEPF++S LN+ A P +K R P S D+
Sbjct: 391 SPWEIEPFISSTGLNIPAGPRIKRLRTSFQPTSTDL 426
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 30/259 (11%)
Query: 407 QSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRP------------- 453
+ + SQ+ P ++ I+ ++D +V+A++ S P
Sbjct: 615 EQNASQIAGPKMATGWQNSTISPCISEDTEVVSAEARFLSSCPSKGPNKLIDFPFKQHHL 674
Query: 454 GNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAAS 513
+ + H +V+ G + C LFG+ L S+ ++ + + G+ A
Sbjct: 675 ASEISHHQVKDGGGVKGDRNCKLFGVSLIEESDCIDDGSSRMHKDSVISDGLH-VALGKG 733
Query: 514 DFDASQNQDLKEVKRGMAD-----VSRKETQN----------KQGSAASTRTRTKVQMQG 558
F S +QD ++++ + D V ++T+ K AS R+ TKV QG
Sbjct: 734 PFHFSSSQDHDQLEKDLDDHCGHLVPLRDTEQEITSQMVPKAKSSVQASGRSCTKVHKQG 793
Query: 559 IAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPE 617
AVGRAVDL+ GYD+L ELE++F ++ L P W VV+TD+EGD+ML GDD W E
Sbjct: 794 NAVGRAVDLSKFHGYDELIRELERLFNMENLLSDPEKGWHVVYTDNEGDIMLVGDDPWQE 853
Query: 618 FCKMVKKIFIYSTEEVKNM 636
FC +V KI IY+ EEV+ M
Sbjct: 854 FCSIVCKIMIYTREEVEKM 872
>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
Length = 958
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/362 (56%), Positives = 255/362 (70%), Gaps = 35/362 (9%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL--FDLPSKILCRVVH 83
ELW ACAGPL+ +PR G V YFPQGH+EQ+ S + Q + +DLP +I CRV++
Sbjct: 35 ELWHACAGPLISLPRKGSLVVYFPQGHMEQVTTSLKHQCLEQRQMRPYDLPPQIFCRVLN 94
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP-----------------KQTVH 126
+ L A+QETDEVYAQ+TL PE PEP K T H
Sbjct: 95 VNLHADQETDEVYAQVTLVPE-------------PEPAEKDLEEEEEDEEAGVLNKSTPH 141
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EWRF+HI+RG
Sbjct: 142 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGVEWRFRHIYRG 201
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWS FV K L++GDA +FLRGENGELR+G+RR A QQS +PSSV+SSQSM
Sbjct: 202 QPRRHLLTTGWSVFVNHKGLMSGDAVLFLRGENGELRLGIRRAARQQSVIPSSVLSSQSM 261
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
HLGVLA+AA+AV T ++F ++Y PR S +F+I +KY+++ + S+GMRFKMRFE ED
Sbjct: 262 HLGVLASAANAVATKSMFHIFYNPRASPAEFLIPYHKYVKSCNLPLSIGMRFKMRFETED 321
Query: 305 SPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN 363
+ ERR+TG I G+GD +WPGSKWRSL + WDE A ++ ERVSPWEIEP ++ A LN
Sbjct: 322 TAERRYTGIITGIGDVDPAKWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPCISVAGLN 381
Query: 364 LA 365
++
Sbjct: 382 VS 383
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDM 607
R TKV QG VGRAVDL+ L GYD+L ELE++F ++G L P W VV+TD+E D+
Sbjct: 830 RKCTKVHKQGNIVGRAVDLSKLDGYDELISELERLFNMEGLLNDPEKGWQVVYTDNENDI 889
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
ML GDD W EFC +V KI IY+ EEV+ MA
Sbjct: 890 MLVGDDPWQEFCNIVCKILIYTHEEVEKMA 919
>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
gi|223975541|gb|ACN31958.1| unknown [Zea mays]
Length = 766
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/314 (64%), Positives = 246/314 (78%), Gaps = 8/314 (2%)
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP----KQTV 125
+DLP KILC V+++EL AE + DEVYAQ+TL PE+ E S ++ PP + V
Sbjct: 3 FYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRV 62
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
HSFCK LTASDTSTHGGFSVLR+HA ECLPPLDMT PTQEL AKDLHG EWRF+HIFR
Sbjct: 63 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 122
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQPRRHLL +GWS FV++KRLVAGDAF+FLRG++GELRVGVRR QQ+++PSSVISS S
Sbjct: 123 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHS 182
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGE 303
MHLGVLATA HAV T T+F VYYKPRTS +F++ ++Y+E++ + +GMRFKMRFEGE
Sbjct: 183 MHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGE 242
Query: 304 DSPERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
++PE+RFTGTIVG D + W SKWR LK++WDE +++ RPERVSPW+IEP V+ P+
Sbjct: 243 EAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPI 302
Query: 363 NLAQPAVKSKRPRS 376
N P + KRPRS
Sbjct: 303 N-PLPVHRPKRPRS 315
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 99/191 (51%), Gaps = 20/191 (10%)
Query: 474 CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 533
C LFGI L + + PL P+ T + D D S + G V
Sbjct: 554 CKLFGIHLDSPAKSE-PLKSP---PSVATPAAEKWMADGIDADKSPEPHKTPKQLGATQV 609
Query: 534 SRKETQNKQGS--------AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
+ Q S STR+ KV QG+A+GR+VDLT GY +L EL++MF+
Sbjct: 610 DPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFD 669
Query: 586 IQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM---ATSSK 641
G+L+ K W VV+TD EGDMML GDD W EFC MV KIF+Y+ EEV+ M A +S+
Sbjct: 670 FNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSR 729
Query: 642 P----IASSVE 648
P +A+S E
Sbjct: 730 PEDSGLANSTE 740
>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
Length = 795
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/364 (59%), Positives = 271/364 (74%), Gaps = 14/364 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L E+W ACAGPLV +PR G+RV YFPQGHIEQ+ ASTNQ Q P ++LPS+I CR++
Sbjct: 33 LDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNLPSQIYCRLL 92
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPR--SPDQCLPEPPKQTVHSFCKILTASDTSTH 140
++ L A++ETDEV+AQ+TL PE +Q + + D+ P PK+ + FCK LT+SDTSTH
Sbjct: 93 NLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSP-CPKRKLSMFCKNLTSSDTSTH 151
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R+ A ECLPPLD + P QEL AKDLHG EW+F+HI+RGQPRRHLLTTGWS F
Sbjct: 152 GGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVF 211
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSM-PSSVISSQSMHLGVLATAAHAVK 259
V+ K+LVAGDA +FLRG+NGELR+GVRR QQ+S+ SS++SS SMHLGVLA AAHAV
Sbjct: 212 VSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAAAHAVS 271
Query: 260 TSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
T T+F ++Y PR S +F++ +KY++A H SVGMRFKMRFE E+S ERR+ GTI GV
Sbjct: 272 TKTMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERRYMGTITGV 331
Query: 318 GDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA----VKSK 372
GD S++W SKWR L++ WDE +R ERVSPWEIEPF+A N+A P VK
Sbjct: 332 GDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIAP---NVANPPTTQRVKKF 388
Query: 373 RPRS 376
RP +
Sbjct: 389 RPNT 392
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
Query: 529 GMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG 588
G + + ++ SA S RT TKV +QG AVGRAVDL+ Y +L EL+++F +
Sbjct: 643 GNGSLEHERCASRPASAWSLRTCTKVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLDN 702
Query: 589 QLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
L P W VV+TD+EGDM+L GDD W EFC MV+ I I S EV+ + + ++ V
Sbjct: 703 ALDDPDSGWQVVYTDNEGDMLLVGDDPWQEFCNMVRNIRILSPAEVEKLTQGALGKSAVV 762
Query: 648 EGE 650
E E
Sbjct: 763 EEE 765
>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
Length = 620
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/356 (56%), Positives = 261/356 (73%), Gaps = 9/356 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV +PR GERVYYFPQGHIEQL A Q+ HQ +LPSKILC+V+
Sbjct: 45 LYKELWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQQQSEHQMASLNLPSKILCKVI 104
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
+++ AE TD+VYAQI L PE +Q + SPD LPEP + VHSF +ILT SD S+H
Sbjct: 105 NVQCKAEPITDQVYAQIMLLPEPEQIDVISPDPPLPEPERCVVHSFRRILTVSDISSHDH 164
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
F V +KHA CLPPLDM+ P QEL A DL+G +W F+HIF+G+ +HLLTTGWS FV+
Sbjct: 165 FFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQHIFQGKSNKHLLTTGWSAFVS 224
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
SK+LV+GD F+FLRGENGELRVGVRRL +++++ SS S+Q H +LA A++A+ T +
Sbjct: 225 SKKLVSGDMFIFLRGENGELRVGVRRLMGRKTNILSSATSNQIRH-SLLAVASYAISTGS 283
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
LF V+Y+PRT S+FI+ +NKY+EA +H F +GMRF MRFEGE+ P R GTIV + +
Sbjct: 284 LFCVFYEPRTSRSEFIVSVNKYIEARNHKFCIGMRFLMRFEGEEVPIERINGTIVSM-ET 342
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
S +WP S+WR K++WDEP+ + PERVSPWE+E +S +QP ++KR RS
Sbjct: 343 SPRWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENISSS-----SQPVPRTKRSRS 393
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVV 599
K S + +V+MQGIA+GR++DLT K ++DL ELE MFEI+G+L KW +V
Sbjct: 529 KLCSKKQITSCAEVRMQGIALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKKWLIV 588
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIY 628
+TD + +M L GD QW C MVKKI IY
Sbjct: 589 YTDADSEMKLVGDYQWEVVCNMVKKILIY 617
>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
Length = 1043
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 264/638 (41%), Positives = 364/638 (57%), Gaps = 61/638 (9%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST-NQELTHQE-PLFDLPSKILCR 80
LY ELW+ACAG V VPR +RV+YFPQGH+EQ+ A T NQ +H E P++DLPSKILC+
Sbjct: 411 LYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPDSHLEIPVYDLPSKILCK 470
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-------PPKQTVHSFCKILT 133
++++EL AE +DEVYAQ+TL PE + + C E P + +SF KILT
Sbjct: 471 IMNVELKAEAYSDEVYAQVTLVPEVQKD-----NLCFEEEVNIDQIPSRNAAYSFSKILT 525
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
SDTSTHGGFSV +K+A EC PPLDMTL TP QE+ AKDL+G+EWRF+HI+RGQP+RHLL
Sbjct: 526 PSDTSTHGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKRHLL 585
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS--SMPSSVISSQSMHLGVL 251
T+GWS FV +K+LVAGD+ +F+RGE+GELRVG+RR A S S SS+IS SM LG+L
Sbjct: 586 TSGWSLFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQSSSLISGHSMQLGIL 645
Query: 252 ATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
A++AV T+F+VYY+P T+ +FI+ L YL++ + +G R +M+ E E+S RR
Sbjct: 646 TNASNAVGNRTMFLVYYRPWTNPFEFIVHLQTYLKSTLQDYPIGTRVQMQHEVEES-LRR 704
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQ---RPERVSPWEIEPFVASAPLNLA 365
GTI+G D S +WPGS WR LK+QWD A V+ PERV PW IEP + SA
Sbjct: 705 LAGTIIGNEDIDSIRWPGSAWRRLKVQWD--AIVEDKMHPERVCPWWIEP-LESAKEKKQ 761
Query: 366 QPAVKSKRP-------RSI---------DIPASASAFWYQ-----GSTQSHDITQVVGAT 404
PA+ +K+ RS+ D+ +++ Q G Q D + +
Sbjct: 762 VPALPTKKKGHALLNQRSLPGISGFGKNDVHQNSAGPSSQTRRADGDLQGQDYSGLSPPQ 821
Query: 405 EGQSSES-QVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVE 463
Q + S ++RP + I + + + H + + + S GR ++ HE++
Sbjct: 822 PLQRAPSTDIIRPSKV-PIRGSRFGKENRNQHPFLKQDPL---HKSLGR-SMSLTHEDLS 876
Query: 464 RGKKSEASLGCWLFGI-DLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQD 522
+ S+G G+ + AP G+ T GV ++ + + D
Sbjct: 877 ITSSNLTSIGSESLGMPSTESRDENDAPFGQPGSSSTFKLFGVN-LIDSSPEIPSVNFVD 935
Query: 523 LKEVKRGMAD----VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFD 578
L + + V+ +T K + R+ TKV G A+GRAVDL GY +L
Sbjct: 936 LNKTSSLPSSPPMGVAPGKTCKK-CRCVNNRSCTKVLKLGNALGRAVDLARFNGYTELIA 994
Query: 579 ELEKMFEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQW 615
EL+ MF+ QG L W V DDEGDMM GD W
Sbjct: 995 ELDSMFDFQGTLISGGSGWHVTCLDDEGDMMQLGDYPW 1032
>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
Length = 396
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/371 (58%), Positives = 275/371 (74%), Gaps = 14/371 (3%)
Query: 18 PGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
P G+ L E+W ACAGPLV +PR G+RV YFPQGHIEQ+ ASTNQ Q P ++LP
Sbjct: 25 PNHGNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNLP 84
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR--SPDQCLPEPPKQTVHSFCKIL 132
S+I CR++++ L A++ETDEV+AQ+TL PE +Q + + D+ P PK+ + FCK L
Sbjct: 85 SQIYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSP-CPKRKLSMFCKNL 143
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
T+SDTSTHGGFSV R+ A ECLPPLD + P QEL AKDLHG EW+F+HI+RGQPRRHL
Sbjct: 144 TSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHL 203
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSM-PSSVISSQSMHLGVL 251
LTTGWS FV+ K+LVAGDA +FLRG+NGELR+GVRR QQ+S+ SS++SS SMHLGVL
Sbjct: 204 LTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVL 263
Query: 252 ATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
A AAHAV T T+F ++Y PR S +F++ +KY++A H SVGMRFKMRFE E+S ERR
Sbjct: 264 AAAAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERR 323
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
+ GTI GVGD S++W SKWR L++ WDE +R ERVSPWEIEPF+A N+A P
Sbjct: 324 YMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIAP---NVANPP 380
Query: 369 VKSKRPRSIDI 379
++R R+ I
Sbjct: 381 T-TQRARTTQI 390
>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
Length = 826
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/360 (59%), Positives = 255/360 (70%), Gaps = 37/360 (10%)
Query: 55 QLEASTNQELTHQ-EPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQ------ 107
Q+EASTNQ Q PL++LP KI C+V+++EL AE +TDEVYAQ+TL PE Q
Sbjct: 27 QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG 86
Query: 108 TEPRSPDQCLPE---PPKQT----VHSFCKILTASDTSTHGGFSVLRKHATECLPPL--- 157
S D+ E PP T VHSFCK LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 87 NGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSF 146
Query: 158 ----------------DMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
DM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 147 FDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 206
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
++KRLVAGDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 207 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTG 266
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
T+F VYYKPRT S+F++ + Y E++ S+GMRFKM FEGE++ E+RFTGTIVGVGD
Sbjct: 267 TMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGD 326
Query: 320 FSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN-LAQPAVKSKRPRSI 377
W SKWRSLK++WDE A+V RP+RVSPW+IEP + +P+N L P K RP +
Sbjct: 327 SDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVL 386
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 22/197 (11%)
Query: 452 RPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG------- 504
+P VI V++ K S C LFGI L ++ A + P+ G
Sbjct: 600 KPQPLVIDHNVQKAKGS----SCMLFGISL----DSPAKPELLISPPSVAFDGKLQQDAL 651
Query: 505 ----VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIA 560
++ D +Q+ +E + D + K Q+KQ + S+R+ KV QGIA
Sbjct: 652 EEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGT-KNIQSKQQNG-SSRSCKKVHKQGIA 709
Query: 561 VGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFC 619
+GR++DLT YD+L EL++MF+ G+L K W VV+TD+EGDMML GDD W EFC
Sbjct: 710 LGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFC 769
Query: 620 KMVKKIFIYSTEEVKNM 636
MV KIFIY+ EEV+ M
Sbjct: 770 NMVHKIFIYTREEVQKM 786
>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
Length = 801
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/366 (55%), Positives = 261/366 (71%), Gaps = 8/366 (2%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
DLY ELW CAGPLV + R G++V YFPQGHIEQ+EA TNQ+ + P+++LPSKI C+V
Sbjct: 135 DLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYNLPSKIFCKV 194
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--PPKQTVHSFCKILTASDTST 139
V+++L AE TDEV+AQ+TL PE Q E +SPD + P + +SF K LT SDT+T
Sbjct: 195 VYVQLKAEACTDEVFAQVTLLPEAKQ-EWQSPDHGNSQFFPRRTHSYSFSKTLTPSDTNT 253
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV ++HA ECLPPLDMT P QEL AKDLHG EWRF+HIFRGQP+RHLLT+GWS
Sbjct: 254 HGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGWSQ 313
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FVTSK+LVAGDA +FLRG NGELRVGVRR Q+++ +SV+S SM G+LA+A HA+
Sbjct: 314 FVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFHAIS 373
Query: 260 TSTLFIVYYKPRTS-QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
T T+F VY++P TS +FII ++Y+++ + +SVG RF+M FEGE+ ++R GTIVG+
Sbjct: 374 TGTMFTVYFRPWTSPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQRCAGTIVGIE 433
Query: 319 DFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP--FVASAPLNLAQPAVKSKRPR 375
D +WP S+WR K+QWD PERV+ W IEP F+ ++ P +K RP
Sbjct: 434 DVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIEFIKKKHTSIL-PQLKRARPT 492
Query: 376 SIDIPA 381
PA
Sbjct: 493 DPLCPA 498
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
D+S K+ +N + R+ TKV G A+GR++DL GYD+L EL++MF+ G L
Sbjct: 691 GDLSDKQCKN--CCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSL 748
Query: 591 RPRD-KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
+W V +TDDEGDMML GD W EF MV++IFI EE + + +++
Sbjct: 749 MDGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLNSAT 799
>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/366 (55%), Positives = 261/366 (71%), Gaps = 8/366 (2%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
DLY ELW CAGPLV + R G++V YFPQGHIEQ+EA TNQ+ + P+++LPSKI C+V
Sbjct: 30 DLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYNLPSKIFCKV 89
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--PPKQTVHSFCKILTASDTST 139
V+++L AE TDEV+AQ+TL PE Q E +SPD + P + +SF K LT SDT+T
Sbjct: 90 VYVQLKAEACTDEVFAQVTLLPEAKQ-EWQSPDHGNSQFFPRRTHSYSFSKTLTPSDTNT 148
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV ++HA ECLPPLDMT P QEL AKDLHG EWRF+HIFRGQP+RHLLT+GWS
Sbjct: 149 HGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGWSQ 208
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FVTSK+LVAGDA +FLRG NGELRVGVRR Q+++ +SV+S SM G+LA+A HA+
Sbjct: 209 FVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFHAIS 268
Query: 260 TSTLFIVYYKPRTS-QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
T T+F VY++P TS +FII ++Y+++ + +SVG RF+M FEGE+ ++R GTIVG+
Sbjct: 269 TGTMFTVYFRPWTSPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQRCAGTIVGIE 328
Query: 319 DFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP--FVASAPLNLAQPAVKSKRPR 375
D +WP S+WR K+QWD PERV+ W IEP F+ ++ P +K RP
Sbjct: 329 DVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIEFIKKKHTSIL-PQLKRARPT 387
Query: 376 SIDIPA 381
PA
Sbjct: 388 DPLCPA 393
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
D+S K+ +N + R+ TKV G A+GR++DL GYD+L EL++MF+ G L
Sbjct: 586 GDLSDKQCKN--CCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSL 643
Query: 591 RPRD-KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
+W V +TDDEGDMML GD W EF MV++IFI EE + + +++
Sbjct: 644 MDGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLNSAT 694
>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
Length = 840
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/353 (60%), Positives = 253/353 (71%), Gaps = 32/353 (9%)
Query: 56 LEASTNQELTHQ-EPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPD 114
+EASTNQ Q PL++LP KI C+V+++EL AE +TDEVYAQ+TL PE S D
Sbjct: 49 VEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGN-VSKD 107
Query: 115 QCLPE---PPKQT----VHSFCKILTASDTSTHGGFSVLRKHATECLPPL---------- 157
+ E PP T VHSFCK LTASDTSTHGGFSVLR+HA ECLPPL
Sbjct: 108 KVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVA 167
Query: 158 ---------DMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVA 208
DM+ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVA
Sbjct: 168 MPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVA 227
Query: 209 GDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYY 268
GDAF+FLRGENGELRVGVRR QQ+++PSSVISS SMHLGVLATA HAV T T+F VYY
Sbjct: 228 GDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYY 287
Query: 269 KPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQ-WP 325
KPRT S+F++ + Y E++ S+GMRFKM FEGE++ E+RFTGTIVGVGD W
Sbjct: 288 KPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWA 347
Query: 326 GSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN-LAQPAVKSKRPRSI 377
SKWRSLK++WDE A+V RP+RVSPW+IEP + +P+N L P K RP +
Sbjct: 348 DSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVL 400
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 104/197 (52%), Gaps = 22/197 (11%)
Query: 452 RPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG------- 504
+P VI V++ K S C LFGI L ++ A + P+ G
Sbjct: 614 KPQPLVIDHNVQKAKGS----SCMLFGISL----DSPAKPELLISPPSVAFDGKLQQDAL 665
Query: 505 ----VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIA 560
++ D +Q+ E + D + K Q+KQ + S+R+ KV QGIA
Sbjct: 666 EEDECSDPSKTVKPLDGAQHDSATEKHQSCPDGT-KNIQSKQQNG-SSRSCKKVHKQGIA 723
Query: 561 VGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEFC 619
+GR++DLT YD+L EL++MF+ G+L K W VV+TD+EGDMML GDD W EFC
Sbjct: 724 LGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFC 783
Query: 620 KMVKKIFIYSTEEVKNM 636
MV KIFIY+ EEV+ M
Sbjct: 784 NMVHKIFIYTREEVQKM 800
>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
Length = 326
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/292 (68%), Positives = 234/292 (80%), Gaps = 4/292 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY+ELW ACAGPLV VPR GERVYYFPQGHIEQ+EASTNQ Q P++DL SKILCRV+
Sbjct: 34 LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKILCRVI 93
Query: 83 HIELLAEQETDEVYAQITLHPETDQTE-PRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+++L A+ +TDEV+AQITL PE +Q E + P P+ VHSFCK LTASDTSTHG
Sbjct: 94 NVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHG 153
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLP LDM+ PTQ+L AKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 154 GFSVLRRHAEECLPVLDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 213
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLR E ELRVGVRR QQ ++PSSVISS SMHLGVLATA HAV T
Sbjct: 214 SSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTG 272
Query: 262 TLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
T+F VYYKPR S +FI+ ++Y+E+V +S+GMRFKMRFEGE++PE+R
Sbjct: 273 TMFTVYYKPRISPAEFIVPFDQYMESVKSNYSIGMRFKMRFEGEEAPEQRLV 324
>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
Length = 541
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/357 (51%), Positives = 253/357 (70%), Gaps = 7/357 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY +LWK CAGPL ++P+ GE VYYFPQG+IEQL AS N L +P+FD+ S+I C V+
Sbjct: 23 LYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASANDNLCQLKPIFDISSRIHCNVI 82
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+L E TDEVYA+++L P + + E P+ + +Q + F K+LTASD HG
Sbjct: 83 SIKLKVETNTDEVYAKVSLLPCSPEVEITFPN----DNNEQNIKYFTKVLTASDIGPHGD 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
F + +K A ECLPPLDM+ P+QE+ AKDLH + W+FKH FRG P+RHL T+GW FV
Sbjct: 139 FILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKFKHTFRGTPKRHLFTSGWKEFVK 198
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
K L GD+FVFLRGENGE RVG+R+ +HQQS M SSVIS +SMH G +A+A++A+ T
Sbjct: 199 GKSLAVGDSFVFLRGENGESRVGIRKTSHQQSDMSSSVISKESMHHGFIASASNAIHTKC 258
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+F V+YKP++S+FI+ +K+L+AV+ F+ RF M+FEG D E ++GTIV + DFS
Sbjct: 259 MFDVFYKPKSSKFIVNCDKFLDAVNMKFNTSSRFTMKFEGHDFNEIIYSGTIVKMEDFSI 318
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK-SKRPRSID 378
W GS+WR+L++QWDE AT+ RP +VS WEIEP + S+ N+ + ++ +KR R I+
Sbjct: 319 YWKGSEWRNLQVQWDEAATIPRPNKVSLWEIEPLIPSS--NILKSVIQNNKRQREIN 373
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 86/162 (53%), Gaps = 19/162 (11%)
Query: 468 SEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVK 527
+ AS LFG+DL TA+ R V++P K S+ +N D +
Sbjct: 398 TNASSSFRLFGVDL-----TASSKARDVLEPLESYQKNK-----TSEIFEEENLDQTQAV 447
Query: 528 RGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ 587
+ ++ RKE + T + TKV M+G V R VDLT GY+ + ELEK+F I+
Sbjct: 448 TSLTEIQRKE-------LSFTTSSTKVHMEG--VTRTVDLTVFDGYNHMIVELEKLFNIE 498
Query: 588 GQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYS 629
G+L +W + F D EGDMML GDD WP+FC +VK+I I S
Sbjct: 499 GKLHMHSQWKLTFKDHEGDMMLVGDDPWPKFCNIVKEIVISS 540
>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 505
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/467 (43%), Positives = 290/467 (62%), Gaps = 35/467 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LW CAGPL +P+ GE+VYYFPQGHIE +E ST EL H P+FDLPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+ ++ TDEVYAQI+L P+T + + P V+ F KILTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTEVMTHNTTMDTRRP---IVYFFSKILTASDVSLSGG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 200
+ +++A EC PPLDM+ TQ L AKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
T+KRL+ GD FV LRGENGELR G+RR HQQ +PSSVIS+ M GV+A+ +A KT
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 261 STLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+F V YKP +SQF+I +K+++A+++ + VG RF+M+FEG+D E+R+ GTI+GV D
Sbjct: 259 KCMFNVVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDM 318
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP--RSID 378
S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++Q ++K K+ + +
Sbjct: 319 SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKHWLQLNE 376
Query: 379 IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIV 438
I A+ S W Q +G S P+ E N+ +D + +
Sbjct: 377 IGATLSNLW---------TCQEIGQRSMNS-------PISVPEFSYP----NAIEDSKFL 416
Query: 439 AAQSVLSGYASSGRPGNTVIHEEVERGKK----SEASLGCWLFGIDL 481
+ +L ++ P +++ + +K +EA+ C LFG+DL
Sbjct: 417 SG--LLLNHSLLAIPNENYNSDQMIQPRKEDITTEATTSCLLFGVDL 461
>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
Length = 798
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/441 (48%), Positives = 280/441 (63%), Gaps = 65/441 (14%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+YRELW ACAGPLV VPR +RV+YFPQGHIEQ+EASTNQ Q PL+DLPSK+LCRV+
Sbjct: 41 IYRELWHACAGPLVTVPRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVI 100
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-TVHSFCKILTASDTSTHG 141
+++L AE +TDEVYAQITL PE +Q E + P PP + VHSFCK LTASDTSTHG
Sbjct: 101 NVDLKAEVDTDEVYAQITLLPEPNQDENAVEKEAPPPPPPRFQVHSFCKTLTASDTSTHG 160
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSVLR+HA ECLPPLDM+ PTQEL AKDLH EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 161 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSGWSVFV 220
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+SKRLVAGDAF+FLR E
Sbjct: 221 SSKRLVAGDAFIFLRTSPSE---------------------------------------- 240
Query: 262 TLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
FIV + ++Y+E+V + +S+GMRFKMRFEGE++PE+RFTGTIVG+ D
Sbjct: 241 --FIVPF-----------DQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSD 287
Query: 322 -EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIP 380
+W SKWRSLK++WDE +++ RPERVSPW+IEP +A L+ P + KRPRS P
Sbjct: 288 PTRWAKSKWRSLKVRWDETSSIPRPERVSPWKIEPALAPPALSPV-PMTRPKRPRSNMAP 346
Query: 381 AS--ASAFWYQGSTQ-------SHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNS 431
+S +S +GS++ + +++V+ E + ++ + +S+++ +S
Sbjct: 347 SSPDSSMHIKEGSSKVNVYPLPASGLSRVLQGQEYPTLRTKHTESVECDAPESSVVWQSS 406
Query: 432 TDDHRIVAAQSVLSGYASSGR 452
DD ++ A + SSGR
Sbjct: 407 ADDDKVDVASRRYENWMSSGR 427
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 100/196 (51%), Gaps = 24/196 (12%)
Query: 473 GCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMAD 532
C LFGI L +N N D T + + + QDL + +G
Sbjct: 571 NCRLFGIPLVNNVNE--------TDSTMSQRNNLNENSGFTQMASPKVQDLSDHSKGSKS 622
Query: 533 VSRKETQNKQGSAA------------STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
+ Q + A S R+ TKV QGIA+GR+VDL+ + Y++L EL
Sbjct: 623 TNDHREQGRPSQAKQPHAKDSHCKTNSNRSCTKVHKQGIALGRSVDLSKFQNYEELIAEL 682
Query: 581 EKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM--- 636
+ +FE G+L P+ W +V+TDDE DMML GDD W EFC MV+KIFIY+ EEV+NM
Sbjct: 683 DMLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRNMNPR 742
Query: 637 ATSSKPIASSVEGEGT 652
S + +V GEG+
Sbjct: 743 TLSCRSEEEAVVGEGS 758
>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
Length = 920
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/390 (54%), Positives = 271/390 (69%), Gaps = 41/390 (10%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLE---------------------------- 57
ELW ACAGPL+ +P G RV YFPQGH+EQ+
Sbjct: 38 ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVTPMAEEASS 97
Query: 58 --------ASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE 109
+S +Q + Q + LP +ILCRV+++ L A+QE DEVYAQ+TL P+++++E
Sbjct: 98 AASLNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKSE 157
Query: 110 PRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELA 169
+ ++ LP PP T H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL
Sbjct: 158 -KCIEEQLPVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELV 216
Query: 170 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL 229
AKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+ KRLVAGDA +FLR ENGELR+G+RR
Sbjct: 217 AKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIRRA 276
Query: 230 AHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH 287
+ QQSS+PSSV+SS +H GVLA AHAV T ++F ++Y PRTS +F+I +KY+++ +
Sbjct: 277 SQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIFYNPRTSPTEFVIPYHKYVKSFN 336
Query: 288 HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPE 346
H FS+GMRFKMRFE ED+ ERR+TGTIVG+GD +WP S+WRS K+ WDE A +R E
Sbjct: 337 HSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSEWRSFKVGWDEHAAQERQE 396
Query: 347 RVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
RVSPWEIEPF ++ LN A P + KR R+
Sbjct: 397 RVSPWEIEPFTSATGLN-ALPGPRVKRLRT 425
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDE 604
AS R+ TKV QG AVGRAVDL+ L+GYD+L ELE +F ++G L P W +V+TD+E
Sbjct: 789 ASGRSCTKVHKQGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNE 848
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
GD+ML GDD W EFC +V KI I + EEV+ M
Sbjct: 849 GDIMLVGDDPWQEFCNIVCKILICTQEEVQKM 880
>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
Length = 540
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/616 (36%), Positives = 323/616 (52%), Gaps = 129/616 (20%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +L K CAGPL + P+ GE+ L S N EL +P+FD+PSKI C V
Sbjct: 23 LNGQLLKLCAGPLFDTPKVGEK-----------LVTSINDELCQLKPIFDIPSKICCNVF 71
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E T+++YA++ L P+T E P E Q ++ F K+L+ASDT GG
Sbjct: 72 SINLKVENNTNDIYAEVALLPDTSDVEIPIPKN---ENNIQNINYFTKVLSASDTCKTGG 128
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
F + ++HA ECLP LDM+ TP+QE+ AKD+HG++W FKH
Sbjct: 129 FVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHT------------------- 169
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
LRGENGE RVG+ R AHQ+ ++P+S IS QSMH GV+ATA + +K
Sbjct: 170 ------------LRGENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATALNTIKNKC 217
Query: 263 LFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
+F+V+YKPR+SQF++ +K+++ V++ FS+G +F M+FEG+D E R+ GTIVGVGDFS
Sbjct: 218 MFVVFYKPRSSQFLVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNETRYNGTIVGVGDFST 277
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPAS 382
W S+WRSLK+QWD AT+ RP++VSPWEIE S+ ++ + K R ID+
Sbjct: 278 HWKDSEWRSLKVQWDGTATIPRPDKVSPWEIEMLTQSSNISKSDYL---KNKRQIDVYEF 334
Query: 383 ASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQS 442
S W +Q G GQ S +R
Sbjct: 335 GSKMWSPTLSQ--------GQESGQPSIQSSMR--------------------------- 359
Query: 443 VLSGYASSGRPGNTVIHEEVERGKK----SEASLGCWLFGIDLKHNSNTAAPLGRKVVDP 498
Y+ S T+ +E++ + K + A+ C LFG+DL + + T P V+P
Sbjct: 360 ----YSFS-----TMYNEQMAQAMKETSTTTATTSCRLFGVDLVNPATTKDP-----VEP 405
Query: 499 TTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQG 558
+K S K ++++ R+ TKV M+G
Sbjct: 406 IDSNKKLKIS---------------------------KIFEDEKIDHVQARSHTKVHMEG 438
Query: 559 IAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEF 618
+ + R VDLT GY L DELE++F+I+G+L +KW + F D+GDMM+ GDD W +F
Sbjct: 439 V-IERTVDLTIFDGYSQLIDELERLFDIKGELHMHNKWKMFFIYDDGDMMILGDDPWTKF 497
Query: 619 CKMVKKIFIYSTEEVK 634
C M K+IFI S + VK
Sbjct: 498 CYMAKEIFICSKKGVK 513
>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 253/347 (72%), Gaps = 15/347 (4%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST-----NQELTHQEPLFDLPSK 76
DLY ELW ACAGPLV VPR G++V+YFPQGH+EQ+ ST N+E + P++DLP K
Sbjct: 1 DLYTELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIYDLPYK 60
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTA 134
ILC+VVH+EL AE TDEV+A+ITL P E D+ + LP K SF K LT
Sbjct: 61 ILCKVVHVELKAEAGTDEVFARITLLPVAEEDELSSNKDGKSLPLHRKTCARSFTKKLTP 120
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDT THGGFSV ++HA +CLPPLD + P QEL AKDLHG+EW FKHI+RGQP+RHL+T
Sbjct: 121 SDTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKRHLIT 180
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
+GWSTFV+SKRLVAGD+F+FLRGE+GELRVGVRR ++++ ++++SS SM LG+L++A
Sbjct: 181 SGWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSMQLGILSSA 240
Query: 255 AHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
+HA+ T ++F +Y+ P TS +FII ++Y+++ +S G RF+M FEGE+ E+RF G
Sbjct: 241 SHAITTGSMFTIYFHPWTSPAEFIIPYDQYMKSAEIDYSAGTRFRMLFEGEECAEQRFEG 300
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWD---EPATVQRPERVSPWEIEP 355
T+VG D +WP S+WR LK++WD EP Q ERVSPW IEP
Sbjct: 301 TVVGTEDVDHIRWPNSEWRILKVKWDAASEPFVHQ--ERVSPWNIEP 345
>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
Length = 919
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/390 (54%), Positives = 269/390 (68%), Gaps = 41/390 (10%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLE---------------------------- 57
ELW ACAGPL+ +P G RV YFPQGH+EQ+
Sbjct: 38 ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHRGGRGSFLNVNHAAAPMAEEASS 97
Query: 58 --------ASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE 109
+S +Q + Q + LP +ILCRV+++ L A+QE DEVYAQ+TL P++++ E
Sbjct: 98 AAALNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDSEKNE 157
Query: 110 PRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELA 169
+ ++ L PP T H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL
Sbjct: 158 -KCMEEQLSVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELV 216
Query: 170 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL 229
AKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+ KRLVAGDA +FLR ENGELR+G+RR
Sbjct: 217 AKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIRRA 276
Query: 230 AHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH 287
+ QQSS+PSSV+SS +H GVLA AHAV T ++F +YY PRTS +F+I +KY+++ +
Sbjct: 277 SQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIYYNPRTSPTEFVIPYHKYVKSFN 336
Query: 288 HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPE 346
H FS+GMRFKMRFE ED+ ERR+TGTIVG+GD +WP S+WRS K+ WDE A +R +
Sbjct: 337 HSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSRWRSFKVGWDEHAAQERQD 396
Query: 347 RVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
RVSPWEIEPF ++ LN A P + KR R+
Sbjct: 397 RVSPWEIEPFTSATGLN-ALPGPRVKRLRT 425
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDE 604
AS R+ TKV QG AVGRAVDL+ L+GYD+L ELE +F ++G L P W +V+TD+E
Sbjct: 788 ASGRSCTKVHKQGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNE 847
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
GD+ML GDD W EFC +V KI I + EEV+ M
Sbjct: 848 GDIMLVGDDPWQEFCNIVCKILICTQEEVQKM 879
>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
Length = 905
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/369 (52%), Positives = 257/369 (69%), Gaps = 16/369 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL--FDLPSKILCRVVH 83
ELW ACAGPL+ +P+ G V YFPQGHIEQL ++ Q+ P+ +DLP +I CRV++
Sbjct: 40 ELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQIFCRVLN 99
Query: 84 IELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLPEPPKQTVHSFCKILTASDT 137
+ LLA+QETDEV+AQ+TL PE + Q E L +P T+H FCK LTASDT
Sbjct: 100 VNLLADQETDEVFAQVTLVPEPEPVGDNFQDEENQNASVLSKP---TLHMFCKTLTASDT 156
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A +C PPLD T P+QEL AKDLHG EW+F+HI+RGQPRRHLLTTGW
Sbjct: 157 STHGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQPRRHLLTTGW 216
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV+ K L A +FLRGENGELR+G+RR + SS+PSSV S Q+++L V+A A +A
Sbjct: 217 SVFVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVYLSVIAAATNA 276
Query: 258 VKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
V T ++F ++Y PR S +FII KY+ + VG RF+M+FE ED+ E+R+TG +
Sbjct: 277 VATKSMFHIFYNPRASPAEFIIPYQKYVRSCKQSLLVGTRFRMKFESEDTAEKRYTGIVT 336
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
+GD +WPGSKWRSLK+ WDE + +R ERVSPWEIEP +A + +N++ + KR
Sbjct: 337 SIGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEPSIAVSGVNVSS-GTRCKRL 395
Query: 375 RSIDIPASA 383
R+ ++P S
Sbjct: 396 RA-NLPVSV 403
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGD 606
R TKV QG VGRA+DL+ GYD L +ELE++F+++G L P W VV+TD+E D
Sbjct: 803 VRKCTKVHKQGSVVGRAIDLSKFDGYDQLINELERLFDMEGLLNNPEKGWQVVYTDNEDD 862
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+ML GDD W EFC +V KI IY+ +EV+ +
Sbjct: 863 VMLVGDDPWQEFCNIVCKILIYTHDEVQKL 892
>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
Length = 781
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/367 (56%), Positives = 254/367 (69%), Gaps = 18/367 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTH-QEPLFDLPSKILCRV 81
L E W ACAGPLV +P G+RV YFPQGHIEQ+ ASTNQ Q P ++LPS+I CRV
Sbjct: 72 LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRV 131
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP------EP---PKQTVHSFCKIL 132
+++ L A +ETDEVYAQ+TL PE + R DQ L EP K + FCK L
Sbjct: 132 LNLSLGAYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTASSKAKLSMFCKNL 191
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
T+SDTSTHGGFSV R+ A EC P LD P QE+ AKDLHG EW+F+HI+RGQPRRHL
Sbjct: 192 TSSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRHL 251
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH-QQSSMPSSVISSQSMHLGVL 251
LTTGWS FV+ K+LVAGD +F+RG+NGELR+G+RR Q S SS++SS SM +GVL
Sbjct: 252 LTTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVL 311
Query: 252 ATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
A AAHAV T T+F V+Y PR S +F++ +KY+++ +GMRFKMRFE EDS ERR
Sbjct: 312 AAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERR 371
Query: 310 FTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
+ GTI G+GD +WPGSKWR LK+ WDE A +R ERVSPWEIEPF+A P
Sbjct: 372 YMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAPN----VTPP 427
Query: 369 VKSKRPR 375
V +KR R
Sbjct: 428 VSTKRFR 434
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 27/185 (14%)
Query: 458 IHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDA 517
+ E + RG +++ C LFG LK + A+ + V
Sbjct: 597 VEEPLARGNANDSDRECKLFGFSLKPKTALASTVKDDV---------------------- 634
Query: 518 SQNQDLKEVKRGMADVSRKETQNKQGSAAS-TRTRTKVQMQGIAVGRAVDLTALKGYDDL 576
++DL+ G + N+Q +RT TKV G AVGRA+DL+ +GY L
Sbjct: 635 --HKDLESEASGFRKCFTGQNWNQQQQQQQPSRTCTKVHKHG-AVGRALDLSKFRGYTQL 691
Query: 577 FDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+EL+ +F I L +W V+ D+EGDM+L GDD W EFC V+ I I S E++ +
Sbjct: 692 LEELQHLFGIDESLN-GSEWQTVYVDNEGDMLLVGDDPWEEFCTTVRCIRILSPAEIQKL 750
Query: 637 ATSSK 641
++
Sbjct: 751 TVQAR 755
>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 750
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 249/346 (71%), Gaps = 20/346 (5%)
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT----VHSFCKI 131
++IEL E +TDEVYAQ+TL P+ Q E S P P +HSFCK
Sbjct: 1 MNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKT 60
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQPRRH
Sbjct: 61 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRH 120
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LL +GWS FV++KRLVAGDAF+FLRGENGELRVGVRR Q+++PSSVISS +MHLGVL
Sbjct: 121 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVL 180
Query: 252 ATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
ATA HAV T ++F VYYKPRTS +F++ ++Y E++ +S+GMRFKMRFEGE++ E+R
Sbjct: 181 ATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR 240
Query: 310 FTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
FTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +P ++
Sbjct: 241 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--SPCHVNPLP 298
Query: 369 VKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
V+ KR RS S +A ST + ++T V A Q+S ++ +
Sbjct: 299 VRFKRSRS-----SVNALPSDVSTVTREVTSKVMADSQQNSLTRAL 339
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWA 597
QNK S+ STR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P W
Sbjct: 613 QNKVQSS-STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWL 671
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
VV+TD+EGD+ML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 672 VVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERM 710
>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 285
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/283 (68%), Positives = 218/283 (77%), Gaps = 7/283 (2%)
Query: 6 PNFGCSLSSQGGPG--SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTN-Q 62
PN G + GPG S LY+ELW ACAGPLV VPR GERVYYFPQGH+EQLEAS + Q
Sbjct: 4 PNPGAA----AGPGMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQ 59
Query: 63 ELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK 122
+L P+FDLP KILCRVV++EL AE ++DEVYAQI L PE DQ E S D E K
Sbjct: 60 QLDQYLPMFDLPPKILCRVVNVELRAEADSDEVYAQIMLQPEADQNELTSLDAEPQEREK 119
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
T HSFCK LTASDTSTHGGFSVLR+HA ECLP LDM+ P QEL AKDLHG EW F+H
Sbjct: 120 CTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRH 179
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS 242
IFRGQP+RHLLTTGWS FV+SKRLV+GDAF+F+RGENGELRVGVRRL Q +SMPSSVIS
Sbjct: 180 IFRGQPKRHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVIS 239
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEA 285
S SMHLGVLATA+HA+ T TLF V+YKPR ++ L L+
Sbjct: 240 SHSMHLGVLATASHAISTGTLFSVFYKPRFDVVLLYLYICLQC 282
>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
Length = 774
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/365 (56%), Positives = 253/365 (69%), Gaps = 21/365 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTH-QEPLFDLPSKILCRV 81
L E W ACAGPLV +P G+RV YFPQGHIEQ+ ASTNQ Q P ++LPS+I CRV
Sbjct: 72 LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRV 131
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP--EP---PKQTVHSFCKILTASD 136
+++ L A +ETDEVYAQ+TL PE +Q DQ L EP K + F K LT+SD
Sbjct: 132 LNLSLGAYRETDEVYAQMTLVPENEQL-----DQSLELDEPTASSKAKLSMFSKNLTSSD 186
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A EC P LD P QE+ AKDLHG EW+F+HI+RGQPRRHLLTTG
Sbjct: 187 TSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTG 246
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH-QQSSMPSSVISSQSMHLGVLATAA 255
WS FV+ K+LVAGD +F+RG+NGELR+G+RR Q S SS++SS SM +GVLA AA
Sbjct: 247 WSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAA 306
Query: 256 HAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER--RFT 311
HAV T T+F V+Y PR S +F++ +KY+++ +GMRFKMRFE EDS ER R+
Sbjct: 307 HAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERSVRYM 366
Query: 312 GTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
GTI G+GD +WPGSKWR LK+ WDE A +R ERVSPWEIEPF+A P V
Sbjct: 367 GTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAPN----VTPPVS 422
Query: 371 SKRPR 375
+KR R
Sbjct: 423 TKRFR 427
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 27/185 (14%)
Query: 458 IHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDA 517
+ E + RG +++ C LFG LK + A+ + V
Sbjct: 590 VEEPLARGNANDSDRECKLFGFSLKPKTALASTVKDDV---------------------- 627
Query: 518 SQNQDLKEVKRGMADVSRKETQNKQGSAAS-TRTRTKVQMQGIAVGRAVDLTALKGYDDL 576
++DL+ G + N+Q +RT TKV G AVGRA+DL+ +GY L
Sbjct: 628 --HKDLESEASGFRKCFTGQNWNQQQQQQQPSRTCTKVHKHG-AVGRALDLSKFRGYTQL 684
Query: 577 FDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+EL+ +F I L +W V+ D+EGDM+L GDD W EFC V+ I I S E++ +
Sbjct: 685 LEELQHLFGIDESLN-GSEWQAVYVDNEGDMLLVGDDPWEEFCSTVRCIRILSPAEIQKL 743
Query: 637 ATSSK 641
++
Sbjct: 744 TVQAR 748
>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
Length = 549
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/371 (48%), Positives = 253/371 (68%), Gaps = 17/371 (4%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G + L +LWK CAGPL + P+ GE+ L AS + EL +P+FD+PSK
Sbjct: 17 GETNNYLNDKLWKLCAGPLFDTPKIGEK-----------LVASMDDELCQLKPIFDIPSK 65
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
I C V I L E T+E+YA+++L P+T E P E Q ++ F K+L+ASD
Sbjct: 66 ICCNVFSINLKVEPSTNEIYAEVSLLPDTSDVEIPIPKN---ENNIQNINYFTKVLSASD 122
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TST+GGF + ++HA ECLP LDM+ TP+QE+ AKD+HG+EW FKH RG P+RHL T+G
Sbjct: 123 TSTNGGFVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLFTSG 182
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
W+ F K+LVAGD+FVFLRGENGE RVG+ + AHQQ ++P+S+IS +SMH V+ATA +
Sbjct: 183 WNEFAKGKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVVATALN 242
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
A++ +F+V+YKPR+SQFI+ +K+++ V++ FS+G +F M+FEG+D E R+ GT+VG
Sbjct: 243 AIENKCMFVVFYKPRSSQFIVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNEIRYNGTVVG 302
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
V DFS W S+WRSL++QWDE AT+ RP++VSPWEIE S+ + A+K K R
Sbjct: 303 VRDFSTHWKDSEWRSLEVQWDEAATIPRPDKVSPWEIELLTHSSNI-FKSDALKHK--RQ 359
Query: 377 IDIPASASAFW 387
+++ S W
Sbjct: 360 LEVHEFGSKMW 370
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 37/183 (20%)
Query: 456 TVIHEEVERGKK----SEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARA 511
T+ +E++ + K + A+ C LFG+DL + T P V+P K S
Sbjct: 373 TIYNEQMVQAMKEPSTTTATTSCRLFGVDLMVPAITKDP-----VEPIVSNKKCKIS--- 424
Query: 512 ASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALK 571
K ++++ ++RTKV M+G+ + R VDLT
Sbjct: 425 ------------------------KIFEDEKVDHVQAKSRTKVHMEGV-IERTVDLTIFD 459
Query: 572 GYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
GY+ L DELE++F+I+G+L +KW + F ++GDMM+ GDD WP+FC M K+IFI S E
Sbjct: 460 GYNQLIDELERLFDIKGELHMHNKWKMFFIYNDGDMMILGDDPWPKFCNMAKEIFICSKE 519
Query: 632 EVK 634
+VK
Sbjct: 520 DVK 522
>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
Length = 802
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 290/492 (58%), Gaps = 45/492 (9%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ+ AS + + FDL ILCRV++
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQI-ASASPFSPMEMRTFDLQPHILCRVIN 110
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--------------PPKQTVHSFC 129
+ LLA +E DEVY Q+TL P + + L E P + T H FC
Sbjct: 111 VHLLANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFC 170
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A +C PPLD T P+QEL AKDLHG EWRF+HI+RGQPR
Sbjct: 171 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPR 230
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV+ K L++GDA +FLRGENGELR+G+RR ++ +P S++ +Q+
Sbjct: 231 RHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCAN 290
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
LA A+ T + F V+Y PR +QFII KY++++++ SVG RFKMRFE +DSPE
Sbjct: 291 DLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPE 350
Query: 308 RRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-A 365
RRF G +VG+ D S +WP SKWR L ++WD+ + Q ERVSPWEI+P V+ PL++ +
Sbjct: 351 RRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSDHQ--ERVSPWEIDPSVSLPPLSVQS 408
Query: 366 QPAVKSKRPRSIDIPASASAFW-------YQGSTQSHDITQ------VVGATEG-----Q 407
P +K R S+ +AF ++ S +S + Q +V G +
Sbjct: 409 SPRLKKLR-TSLQAAPPNNAFTGRGGFMDFEDSVRSSKVLQGQENVGIVSPFYGCDTVKR 467
Query: 408 SSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGK- 466
S E V +Q ++ + N D+ V A S +G+ S R + +E+ +
Sbjct: 468 SLEFDVRSSAQQNQVSGGVEKLN-IADYVKVHANSSFTGFMESDRFLKVLQGQEICSLRP 526
Query: 467 ---KSEASLGCW 475
K E SLG W
Sbjct: 527 PTSKPEYSLGVW 538
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDD 603
++ R+ TKV QG VGRA+DL+ L GY DL ELE++F ++G L+ DK W V++TD+
Sbjct: 670 SSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDN 729
Query: 604 EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
E D+M+ GD W +FC V KI IY+ EEV+ M
Sbjct: 730 ENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTN 764
>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
Length = 810
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/371 (49%), Positives = 246/371 (66%), Gaps = 16/371 (4%)
Query: 18 PGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKI 77
P + +Y ELW ACAGPL +P+ G V YFPQGH+EQ+ A ++ + P FDL +I
Sbjct: 39 PVTSSIYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-APSSPFSPMEMPTFDLQPQI 97
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----------PPKQTVH 126
C+VV+++LLA +E DEVY Q+ L P+ + P + L E P K T H
Sbjct: 98 FCKVVNVQLLANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKSTPH 157
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EWRF+HI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 217
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWS FV+ K LV+GDA +FLRGE+GELR+G+RR ++ +P SVI Q+
Sbjct: 218 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNS 277
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
+ VL+ A+A+ T ++F V Y PR S F++ KY++++ + +G RFKMRFE +D
Sbjct: 278 YPSVLSVVANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNPVCIGTRFKMRFEMDD 337
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN 363
SPERR +G + G+ D + +WP SKWR L ++WDE ERVSPWEI+P V+ PL+
Sbjct: 338 SPERRCSGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSVSLPPLS 397
Query: 364 L-AQPAVKSKR 373
+ + P +K R
Sbjct: 398 IQSSPRLKKLR 408
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 537 ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK 595
E+ N + R+ TKV QG VGRA+DL+ L GY DL ELE++F ++G L+ P
Sbjct: 654 ESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLSELERLFSMEGLLQDPNKG 713
Query: 596 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
W +++TD E D+M+ GDD W EFC +V KI IY+ EEV+ M
Sbjct: 714 WRILYTDSENDVMVVGDDPWHEFCNVVSKIHIYTQEEVEKM 754
>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
Length = 824
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/359 (53%), Positives = 248/359 (69%), Gaps = 10/359 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E P + +LP ++C++ +I
Sbjct: 27 ELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNI 86
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFS 144
L A+ ETDEVYAQ+TL P Q + L +Q FCK LTASDTSTHGGFS
Sbjct: 87 TLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFS 146
Query: 145 VLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 204
+ R+ A + PPLD + P QE+ A+DLH EWRF+HI+RGQPRRHLLTTGWS FV++K
Sbjct: 147 IPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAK 206
Query: 205 RLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLF 264
RL GDA +F+R E G+L +G+RR QQ+SMP S++S+ SM++G+LA AAHA TS+ F
Sbjct: 207 RLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRF 266
Query: 265 IVYYKPRT--SQFIIGLNKYLEAVHHCFSV--GMRFKMRFEGEDSPERRFTGTIVGVGDF 320
++Y PR S+F+I L+KY AV++ V GMRF+M+FE E+S RR TGTIVG GD
Sbjct: 267 TIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSGDL 326
Query: 321 SE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA--VKSKRPRS 376
+WP S WRSLK++WDEPA ++ +R+S WEIEP AS P + P+ +SKRP S
Sbjct: 327 DPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEP--ASTPYLVCSPSFTFRSKRPWS 383
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKV G +VGR++DLT L YD L EL +MF ++GQL R W +VF D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W EF V+ I I S E+ +M
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPAELSHM 794
>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
Length = 824
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/369 (52%), Positives = 251/369 (68%), Gaps = 11/369 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E P + +LP ++C++ +I
Sbjct: 27 ELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNI 86
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFS 144
L A+ ETDEVYAQ+TL P Q + L +Q FCK LTASDTSTHGGFS
Sbjct: 87 TLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFS 146
Query: 145 VLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 204
+ R+ A + PPLD + P QE+ A+DLH EWRF+HI+RGQPRRHLLTTGWS FV++K
Sbjct: 147 IPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAK 206
Query: 205 RLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLF 264
RL GDA +F+R E G+L +G+RR QQ+SMP S++S+ SM++G+LA AAHA TS+ F
Sbjct: 207 RLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRF 266
Query: 265 IVYYKPRT--SQFIIGLNKYLEAVHHCFSV--GMRFKMRFEGEDSPERRFTGTIVGVGDF 320
++Y PR S+F+I L+KY AV++ V GMRF+M+FE E+S RR TGTIVG GD
Sbjct: 267 TIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSGDL 326
Query: 321 SE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA--VKSKRPRSI 377
+WP S WRSLK++WDEPA ++ +R+S WEIEP AS P + P+ +SKRP S
Sbjct: 327 DPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEP--ASTPYLVCSPSFTFRSKRPWS- 383
Query: 378 DIPASASAF 386
P AF
Sbjct: 384 QAPVILEAF 392
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKV G +VGR++DLT L YD L EL +MF ++GQL R W +VF D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W EF V+ I I S E+ +M
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPSELSHM 794
>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
Length = 709
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/392 (48%), Positives = 259/392 (66%), Gaps = 21/392 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTN--QELTHQEP---LFDLPSKILCR 80
ELW ACAGPL+ +P+ G V YFPQGH+EQ+ A+++ + L H + +DLP +I CR
Sbjct: 50 ELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTYDLPPQIFCR 109
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTE---------PRSPDQCLPEPPKQTVHSFCKI 131
V+ ++L A+QE D+VYAQ+TL PE + E S + L K H FCK
Sbjct: 110 VLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILC---KTIPHMFCKT 166
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EW+F+HI+RGQPRRH
Sbjct: 167 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRH 226
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV K LV+GDA +FLRGE+GELR+G+RR + SS+P SV+SSQ +HL +L
Sbjct: 227 LLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLSIL 286
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
+ AA+A+ T ++F V+Y PR S+F+I KY++++ S+GMRFKMR E EDS E+R
Sbjct: 287 SPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAEKR 346
Query: 310 FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQP 367
TG I G D +WP SKWR L ++WD+ + V R ERVSPWEIEP ++ L+ P
Sbjct: 347 CTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSCPVAP 406
Query: 368 AVKSKRPRSIDIPASASAFWYQGSTQSHDITQ 399
+K + + + + + +SH + Q
Sbjct: 407 RIKRLQTCLMSTLDGMNPLEFAETVRSHKVLQ 438
>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
Length = 919
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 256/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 28 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 87
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P Q +P P + L KQ + FCK LTASDTST
Sbjct: 88 HNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAE-LGSANKQPTNYFCKTLTASDTST 146
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 207 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 266
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 267 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 326
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 327 ISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 385
Query: 376 SIDIPA 381
+P+
Sbjct: 386 PTGLPS 391
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G GR++D+T Y +L EL ++F ++GQL R W +VF D E D+
Sbjct: 788 TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDV 846
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
+L GDD W EF V I I S +EV+ M + SS
Sbjct: 847 LLVGDDPWQEFVSTVSCIKILSPQEVQQMGKQGLELLSS 885
>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
Length = 904
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 258/366 (70%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q +P P + L KQ + FCK LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAE-LGSANKQPTNYFCKTLTASDTST 145
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D + +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 326 ISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 384
Query: 376 SIDIPA 381
+P+
Sbjct: 385 PTGLPS 390
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 577 FDELEKMFEIQGQLRP--RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVK 634
+EL ++F ++GQL R W +VF D E D++L GDD W EF V I I S +EV+
Sbjct: 800 MEELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQ 859
Query: 635 NMATSSKP--IASSVEGEGTAISLD 657
M KP + SS G+ S D
Sbjct: 860 QMG---KPFELLSSAPGKRLGSSCD 881
>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
Length = 917
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 258/366 (70%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q +P P + L KQ + FCK LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAE-LGSANKQPTNYFCKTLTASDTST 145
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D + +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 326 ISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 384
Query: 376 SIDIPA 381
+P+
Sbjct: 385 PTGLPS 390
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G GR++D+T Y +L EL ++F ++GQL R W +VF D E D+
Sbjct: 787 TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDV 845
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKP--IASSVEGEGTAISLD 657
+L GDD W EF V I I S +EV+ M KP + SS G+ S D
Sbjct: 846 LLVGDDPWQEFVNSVSCIKILSPQEVQQMG---KPFELLSSAPGKRLGSSCD 894
>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
Length = 917
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 258/366 (70%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q +P P + L KQ + FCK LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAE-LGSANKQPTNYFCKTLTASDTST 145
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D + +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 326 ISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 384
Query: 376 SIDIPA 381
+P+
Sbjct: 385 PTGLPS 390
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G GR++D+T Y +L EL ++F ++GQL R W +VF D E D+
Sbjct: 787 TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDV 845
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKP--IASSVEGEGTAISLD 657
+L GDD W EF V I I S +EV+ M KP + SS G+ S D
Sbjct: 846 LLVGDDPWQEFVNSVSCIKILSPQEVQQMG---KPFELLSSAPGKRLGSSCD 894
>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 843
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/453 (45%), Positives = 285/453 (62%), Gaps = 46/453 (10%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
+I + A+ ETDEVYAQ+TL P T Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNITMHADVETDEVYAQMTLQPLTPQEQK---DTFLPMELGIPSKQPSNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 SIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F V+Y PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 375
Query: 374 PRSIDIPASASAFWYQGSTQSHD----------------ITQVVGATEGQSSESQVVRPM 417
P W+ G++ HD + Q + + Q + + P
Sbjct: 376 P------------WHPGTSSLHDGRDEATNGLMWLRGGPVDQGLNSLNFQGAGGML--PW 421
Query: 418 RQKEIDSTIINNNSTDDHRIVAA---QSVLSGY 447
Q+ +D T++ N+ ++ + A Q++ SGY
Sbjct: 422 MQQRLDPTLLGNDQNQQYQAMLAAGLQNLGSGY 454
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 476 LFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSAR--AASDFDASQNQDLKEVKRGMADV 533
LFG+++ ++ L V TT ++ S A S F S +++ +
Sbjct: 651 LFGVNID---SSGLLLPTTVPGYTTSSADTNSSTMPLAESGFQGSLYGCMQDSSELLQSA 707
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP- 592
+ +N+ T+T KV G +VGR++D++ Y +L +EL +MF I+G+L
Sbjct: 708 GHTDPENQ------TQTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLEDP 760
Query: 593 -RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
R W +VF D E D++L GDD W F V I I S E+++ M
Sbjct: 761 LRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMG 806
>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
Length = 895
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/441 (46%), Positives = 279/441 (63%), Gaps = 32/441 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKEVDAHIPNHPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP----EPPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNPQEQK---DGYLPAGLGSPNKQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD T P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR QQ+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSVLSSDSMHLGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHH-CFSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L KY++AV+H C SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WE+EP + + P+ + ++ KR
Sbjct: 317 TGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEP-LTTFPMYPSPFQLRLKR 375
Query: 374 P-----------RSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
P R D+ ++ W QG+ + + G V P Q +
Sbjct: 376 PWTPGLPSFNGMRDDDLGMNSQLVWLQGNNGDRGMQSLNFPGMG-------VTPWMQPRL 428
Query: 423 DSTIINNNSTDDHRIVAAQSV 443
D+++I S D ++ +AA ++
Sbjct: 429 DASMIGLQS-DMYQAMAAAAL 448
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ ++N R KV G + GR++D+T Y +L +EL +MF ++G+L R
Sbjct: 749 QSSENADNGDPLNRNFVKVYKSG-SFGRSLDITKFSSYQELRNELARMFGLEGKLDDPVR 807
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
W +VF D E D++L GDD WPEF V I I S +EV+ M + SV +
Sbjct: 808 SGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQQMGKRGLELLKSVPNQ 864
>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
Length = 913
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 256/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P Q +P P + L KQ + FCK LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAE-LGSANKQPTNYFCKTLTASDTST 145
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 326 ICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 384
Query: 376 SIDIPA 381
+P+
Sbjct: 385 PTGLPS 390
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G GR++D+T Y +L EL ++F ++GQL R W +VF + E D+
Sbjct: 781 TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVNREEDV 839
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLD 657
+L GDD W EF V I I S +EV+ M + SS S D
Sbjct: 840 LLVGDDPWQEFVSTVSCIKILSPQEVQQMGKQGLELLSSAPARRLGSSCD 889
>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 841
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/447 (46%), Positives = 284/447 (63%), Gaps = 35/447 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLPEPPKQTVHSFCKILTASDTSTH 140
++ + A+ ETDEVYAQ+TL P T Q + + L P KQ + FCK LTASDTSTH
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLSMELGIPSKQPSNYFCKTLTASDTSTH 140
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R+ A + PPLD +L P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 141 GGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKFRHIFRGQPKRHLLTTGWSIF 200
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
V++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA T
Sbjct: 201 VSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAAT 260
Query: 261 STLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F V+Y PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI G+
Sbjct: 261 NSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGI 320
Query: 318 GDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 321 SDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKRP-- 377
Query: 377 IDIPASASAFWYQGSTQSHD--------ITQVVGATEGQSSESQVVR-----PMRQKEID 423
W+ G++ HD + + G Q S + P Q+ +D
Sbjct: 378 ----------WHPGTSSLHDGRDEATNGLMWMRGGPVDQGLNSLNFQGAGMLPWMQQRLD 427
Query: 424 STIINNNSTDDHRIVAA---QSVLSGY 447
T++ N+ ++ + A Q++ SGY
Sbjct: 428 PTLLGNDQNQQYQAMLAAGLQNLGSGY 454
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
++T KV G +VGR++D++ Y +L +EL +MF I+G+L R W +VF D E
Sbjct: 714 SQTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDREN 772
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E+++ M
Sbjct: 773 DVLLLGDDPWESFVNNVWYIKILSPEDIQKMG 804
>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
Length = 798
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 244/366 (66%), Gaps = 16/366 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW CAG L +P+ G V YFPQGH+EQ AS++ FDLP +I CRVV
Sbjct: 52 IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTFDLPPQIFCRVV 110
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP-----------EPPKQTVHSFCKI 131
+++LLA +E DEVY Q+TL P+ + + L P K T H FCK
Sbjct: 111 NVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKT 170
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EWRF+HI+RGQPRRH
Sbjct: 171 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 230
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV+ K LV+GDA +FLRGE GELR+G+RR ++ +P S+I +Q+ + VL
Sbjct: 231 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVL 290
Query: 252 ATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
+ AA+AV T ++F V+Y PR S +F+I KY++++ + S+G RFKMR++ +DSPERR
Sbjct: 291 SLAANAVATKSMFHVFYSPRASHAEFVIPYQKYVKSITNPISIGTRFKMRYDMDDSPERR 350
Query: 310 FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQP 367
+G + G+GD +WP SKWR L ++WD+ ERVSPWEI+P V+ PL++ + P
Sbjct: 351 SSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLPPLSIQSSP 410
Query: 368 AVKSKR 373
+K R
Sbjct: 411 RLKKLR 416
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 540 NKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAV 598
N Q S R+ TKV QG VGRA+DL+ L GY DLF ELE++F ++G LR DK W +
Sbjct: 663 NSQNSGK--RSCTKVHKQGNLVGRAIDLSRLNGYGDLFSELERLFGMEGLLRDPDKGWQI 720
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++TD E DMM+ GDD W EFC +V KI IY+ EEV+ M
Sbjct: 721 LYTDSENDMMVVGDDPWHEFCNVVSKIHIYTQEEVEKM 758
>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
Length = 907
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/366 (52%), Positives = 256/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 28 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQLICQL 87
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P Q +P P + L KQ + FCK LTASDTST
Sbjct: 88 HNVTMNADPETDEVYAQMTLQPLNPQELKDPYLPAE-LGTANKQPTNYFCKTLTASDTST 146
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD TL P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 147 HGGFSVPRRAAEKVFPPLDFTLQPPAQELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 206
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ ++ +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 207 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 266
Query: 260 TSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S +F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 267 TNSRFTIFYNPRASPCEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 326
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D + +WP S WRS+K+ WDE +R RVS WEIEP + + P+ ++ KRP
Sbjct: 327 ISDLDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPTPFPLRLKRPW 385
Query: 376 SIDIPA 381
+P+
Sbjct: 386 PTGLPS 391
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 529 GMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG 588
G S Q Q A T KV G GR++D+T Y +L EL ++F ++G
Sbjct: 759 GYVPCSHNPNQGNQPPA----TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEG 813
Query: 589 QLRP--RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
QL R W +VF D E D++L GDD W EF V I I S +EV+ M + SS
Sbjct: 814 QLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFVNSVFCIKILSPQEVQQMGKQGLELLSS 873
Query: 647 VEGEGTAISLD 657
+ S D
Sbjct: 874 APSKRLGSSCD 884
>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
Length = 730
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/373 (50%), Positives = 242/373 (64%), Gaps = 26/373 (6%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL--FDLP 74
P SG + ELW ACAGPL+ +P+ G V YFPQGH+EQL PL +DLP
Sbjct: 44 APVSGSVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQLP---------DLPLAVYDLP 94
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPD-----QCLPEP-----PKQT 124
S I CRVV ++L AE DEVYAQ++L P+++Q E + C E T
Sbjct: 95 SYIFCRVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKSTT 154
Query: 125 VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIF 184
H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG+EW+F+HI+
Sbjct: 155 THMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHIY 214
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ 244
RGQPRRHLLTTGWS FV K+LV+GDA +FLRG++GELR+G+RR A + + SQ
Sbjct: 215 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCSQ 274
Query: 245 SMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
++ L HA+ +LF + Y PR +S+FII L+K+L+++ + FSVGMRFKMRFE
Sbjct: 275 QLNQSTLTDVVHAMSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYSFSVGMRFKMRFET 334
Query: 303 EDSPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
ED+ ERR+ G I G+ D +WPGSKWR L ++WD+ T R RVSPWEIEP + +
Sbjct: 335 EDAAERRYMGLITGISDLDPARWPGSKWRCLVVRWDDMET-NRHSRVSPWEIEPSGSVSS 393
Query: 362 LN-LAQPAVKSKR 373
N P +K R
Sbjct: 394 CNSFMTPGLKRSR 406
>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
Length = 838
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/456 (45%), Positives = 281/456 (61%), Gaps = 43/456 (9%)
Query: 12 LSSQGGPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
++ Q G+G+ L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+
Sbjct: 8 VNPQAEEGTGEKKCLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTNKEIDAHI 67
Query: 69 PLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----PPK 122
P + LP++++C++ ++ + A+ ETDEVYAQ+TL P + Q + D CL P K
Sbjct: 68 PSYPGLPAQLICQLHNVTMHADNETDEVYAQMTLQPLSAQEQK---DVCLLPAELGMPSK 124
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
Q + FCK LTASDTSTHGGFSV R+ A + PPLD + P QEL AKDLHG EW+F+H
Sbjct: 125 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRH 184
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS 242
+FRGQP+RHLLTTGWS FV++KRLVAGDA +F+ EN +L +G+RR Q+ MPSSV+S
Sbjct: 185 VFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLS 244
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMR 299
S SMH+G+LA AAHA T++ F ++Y PR S F+I L KY +AV+H SVGMRF+M
Sbjct: 245 SDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMRFRML 304
Query: 300 FEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
FE E+S RR+ GTI G+ D +WP S WRS+K+ WDE +R RVS WEIEP +
Sbjct: 305 FETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LT 363
Query: 359 SAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVV--------------GAT 404
+ P+ + ++ KRP WY G + D V G
Sbjct: 364 TFPMYSSLFPLRLKRP------------WYPGPSSFQDSNNEVINGMTWLRGEIGEQGGP 411
Query: 405 EGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
+ + +S + P Q+ +D ++ + ++ + A
Sbjct: 412 QSVNLQSFGMLPWMQQRVDPAMLRTDYNQQYQAMLA 447
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 532 DVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR 591
D S + Q ++ RT KV G VGR++D+T + Y +L EL +MF I+G L
Sbjct: 695 DSSELVSSAGQVDPSTPRTFIKVYKSGY-VGRSLDITRISSYHELRQELAQMFGIEGLLE 753
Query: 592 P--RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
R W +VF D E D++L GDD W F V I I S E+V+ +
Sbjct: 754 DPQRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKLG 801
>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 773
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/370 (52%), Positives = 257/370 (69%), Gaps = 9/370 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L QG G L ELW ACAGPLV +P +G RV YFPQGH EQ+ A+TN+E+ P +
Sbjct: 8 LGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNY 67
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSF 128
LP +++C++ ++ + A+ ETDEVYAQ+TL P T +Q E P + L P KQ + F
Sbjct: 68 PSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIE-LGIPSKQPSNYF 126
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A + PPLD TL P QEL A+DLH EW+F+HIFRGQP
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQP 186
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R Q+ +PSSV+SS SMH+
Sbjct: 187 KRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHI 246
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDS 305
G+LA AAHA T++ F V++ PR SQ F+I L+KY++AV H SVGMRF+M FE E+S
Sbjct: 247 GLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEES 306
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
RR+ GTI G+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+
Sbjct: 307 SVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYP 365
Query: 365 AQPAVKSKRP 374
+ ++ KRP
Sbjct: 366 SLFPLRLKRP 375
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 544 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFT 601
S+ T+ KV G +VGR++D++ Y +L +EL KMF I+G L R W +VF
Sbjct: 700 SSNQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFV 758
Query: 602 DDEGDMMLAGDDQW 615
D E D++L GDD W
Sbjct: 759 DKENDILLLGDDPW 772
>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
Length = 821
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/370 (52%), Positives = 257/370 (69%), Gaps = 9/370 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L QG G L ELW ACAGPLV +P +G RV YFPQGH EQ+ A+TN+E+ P +
Sbjct: 8 LGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNY 67
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSF 128
LP +++C++ ++ + A+ ETDEVYAQ+TL P T +Q E P + L P KQ + F
Sbjct: 68 PSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIE-LGIPSKQPSNYF 126
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A + PPLD TL P QEL A+DLH EW+F+HIFRGQP
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQP 186
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R Q+ +PSSV+SS SMH+
Sbjct: 187 KRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHI 246
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDS 305
G+LA AAHA T++ F V++ PR SQ F+I L+KY++AV H SVGMRF+M FE E+S
Sbjct: 247 GLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEES 306
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
RR+ GTI G+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+
Sbjct: 307 SVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYP 365
Query: 365 AQPAVKSKRP 374
+ ++ KRP
Sbjct: 366 SLFPLRLKRP 375
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 544 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFT 601
S+ T+ KV G +VGR++D++ Y +L +EL KMF I+G L R W +VF
Sbjct: 700 SSNQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFV 758
Query: 602 DDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEG 649
D E D++L GDD W + + + + + V + ++PI+ S G
Sbjct: 759 DKENDILLLGDDPWEYYHQKMCIKWEIMEKAVVGYSRKTRPISRSCFG 806
>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
WITHOUT FERTILIZATION
gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 811
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/370 (52%), Positives = 257/370 (69%), Gaps = 9/370 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L QG G L ELW ACAGPLV +P +G RV YFPQGH EQ+ A+TN+E+ P +
Sbjct: 8 LGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNY 67
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSF 128
LP +++C++ ++ + A+ ETDEVYAQ+TL P T +Q E P + L P KQ + F
Sbjct: 68 PSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIE-LGIPSKQPSNYF 126
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A + PPLD TL P QEL A+DLH EW+F+HIFRGQP
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQP 186
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R Q+ +PSSV+SS SMH+
Sbjct: 187 KRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHI 246
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDS 305
G+LA AAHA T++ F V++ PR SQ F+I L+KY++AV H SVGMRF+M FE E+S
Sbjct: 247 GLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEES 306
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
RR+ GTI G+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+
Sbjct: 307 SVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYP 365
Query: 365 AQPAVKSKRP 374
+ ++ KRP
Sbjct: 366 SLFPLRLKRP 375
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 544 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFT 601
S+ T+ KV G +VGR++D++ Y +L +EL KMF I+G L R W +VF
Sbjct: 700 SSNQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFV 758
Query: 602 DDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D E D++L GDD W F V I I S E+V M
Sbjct: 759 DKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMG 794
>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
Length = 844
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/393 (50%), Positives = 264/393 (67%), Gaps = 21/393 (5%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G L ELW ACAGPLV +P +G RV YFPQGH EQ+ A+TN+E+ P +
Sbjct: 8 LVQQSHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNY 67
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSF 128
LP +++C++ ++ + A+ ETDEVYAQ+TL P T +Q E P + L P KQ + F
Sbjct: 68 PSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIE-LGIPSKQPSNYF 126
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A + PPLD +L P QEL A+DLH EW+F+HIFRGQP
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRHIFRGQP 186
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+RR Q+ +PSSV+SS SMH+
Sbjct: 187 KRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVLSSDSMHI 246
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDS 305
G+LA AAHA T++ F V++ PR SQ F+I L+KY++AV H SVGMRF+M FE E+S
Sbjct: 247 GLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEES 306
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
RR+ GTI G+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+
Sbjct: 307 SVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYP 365
Query: 365 AQPAVKSKRPRSIDIPASASAFWYQGSTQSHDI 397
+ ++ KRP W+ G++ H I
Sbjct: 366 SLFPLRLKRP------------WHAGTSSLHGI 386
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
T+ KV G +VGR++D++ Y +L +EL KMF I+G L R W +VF D E
Sbjct: 737 TKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEN 795
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISL 656
D++L GDD W F V I I S E+V+ M GEG+ SL
Sbjct: 796 DILLLGDDPWESFVSNVWYIKILSPEDVQEMGD---------HGEGSGGSL 837
>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 916
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 253/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P T +Q EP P + L P KQ + FCK LTASDTST
Sbjct: 80 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAE-LGAPSKQPTNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+FII L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 319 ISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 377
Query: 376 SIDIPA 381
P+
Sbjct: 378 PTGFPS 383
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
TRT KV G + GR++D++ Y L EL MF ++G+L R W +VF D E
Sbjct: 781 TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDREN 839
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
D++L GDD WPEF V I I S +EV++M + +SV
Sbjct: 840 DVLLLGDDPWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSV 881
>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 902
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 253/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P T +Q EP P + L P KQ + FCK LTASDTST
Sbjct: 82 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAE-LGAPSKQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 201 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+FII L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 261 TNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 321 ISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 379
Query: 376 SIDIPA 381
P+
Sbjct: 380 PTGFPS 385
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
TRT KV G + GR++D++ Y L EL MF ++G+L R W +VF D E
Sbjct: 767 TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDREN 825
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
D++L GDD WPEF V I I S +EV++M + +SV
Sbjct: 826 DVLLLGDDPWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSV 867
>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
Length = 916
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 253/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P T +Q EP P + L P KQ + FCK LTASDTST
Sbjct: 80 HNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAE-LGAPSKQPTNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+FII L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 319 ISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 377
Query: 376 SIDIPA 381
P+
Sbjct: 378 PTGFPS 383
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
T T KV G + GR++D++ Y L EL MF ++G+L R W +VF D E
Sbjct: 781 TTTFVKVYKSG-SFGRSLDISKFSRYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDREN 839
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
D++L GDD WPEF V I I S +EV++M + +SV
Sbjct: 840 DVLLLGDDPWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSV 881
>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
Length = 844
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 205/441 (46%), Positives = 283/441 (64%), Gaps = 39/441 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + +LP +++C++
Sbjct: 20 LNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDIHIPNYPNLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + D LP P +Q + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTLQEQK---DTYLPVELGIPSRQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ FIV++ PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 ASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+GD +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 375
Query: 374 PRSIDIPASASAFWYQGST--QSHDITQVVGAT--EGQSSESQV----------VRPMRQ 419
P WY G++ Q ++ + G T G+SSE + P Q
Sbjct: 376 P------------WYPGTSSFQENNSEAINGMTWLRGESSEQGPHLLNLQSFGGMFPWMQ 423
Query: 420 KEIDSTIINNNSTDDHRIVAA 440
+ +D T++ N+ ++ + A
Sbjct: 424 QRVDPTMLRNDLNQQYQAMLA 444
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 546 ASTRTRTKVQM-QGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTD 602
A T RT V++ + ++GR++D+T Y +L EL +MF I+G L R W +VF D
Sbjct: 712 AQTVPRTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGFLENPQRSGWQLVFVD 771
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
E D++L GDD W EF V I I S E+V+ +
Sbjct: 772 RENDVLLLGDDPWEEFVNNVWYIKILSPEDVQKLG 806
>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
Length = 805
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/370 (52%), Positives = 257/370 (69%), Gaps = 9/370 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L QG G L ELW ACAGPLV +P +G RV YFPQGH EQ+ A+TN+E+ P +
Sbjct: 8 LGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNY 67
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSF 128
LP +++C++ ++ + A+ ETDEVYAQ+TL P T +Q E P + L P KQ + F
Sbjct: 68 PSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIE-LGIPSKQPSNYF 126
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A + PPLD TL P QEL A+DLH EW+F+HIFRGQP
Sbjct: 127 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQP 186
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
+RHLLTTGWS FV++KRLVAGD+ +F+R E +L +G+R Q+ +PSSV+SS SMH+
Sbjct: 187 KRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHI 246
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDS 305
G+LA AAHA T++ F V++ PR SQ F+I L+KY++AV H SVGMRF+M FE E+S
Sbjct: 247 GLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEES 306
Query: 306 PERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
RR+ GTI G+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+
Sbjct: 307 SVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYP 365
Query: 365 AQPAVKSKRP 374
+ ++ KRP
Sbjct: 366 SLFPLRLKRP 375
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 30/162 (18%)
Query: 496 VDPTTGT---SGVKGSARAASDFDAS---------QN------QDLKEVKRGMADVSRKE 537
VDP +G S V A ++ D +AS QN QD E+ G ++
Sbjct: 637 VDPDSGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLFGCMQDTHELLHGAGQIN--- 693
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDK 595
+ T+ KV G +VGR++D++ Y +L +EL KMF I+G L R
Sbjct: 694 ------PSTQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSG 746
Query: 596 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GDD W F V I I S E+V+ M
Sbjct: 747 WQLVFVDKENDILLLGDDPWESFVNNVWYIKILSPEDVQQMG 788
>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
Length = 891
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/369 (52%), Positives = 253/369 (68%), Gaps = 14/369 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----PPKQTVHSFCKILTASD 136
++ + A+ ETDEVYAQ+TL P + Q + D CL P KQ + FCK LTAS
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSPQEQK---DVCLLPAELGIPSKQPTNYFCKTLTASG 138
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A + PPLD + P QEL AKDLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 198
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGDA +F+ EN +L +G+RR Q+ MPSSV+SS SMH+G+LA AAH
Sbjct: 199 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GT
Sbjct: 259 AAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 318
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G+ D +WP S WRS+K+ WDE R RVS WEIEP + + P+ + +++ K
Sbjct: 319 ITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEP-LTTFPMYPSPFSLRLK 377
Query: 373 RPRSIDIPA 381
RP +P+
Sbjct: 378 RPWPSGLPS 386
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 499 TTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQG 558
+T TS V SD AS D + G S Q Q + R KVQ G
Sbjct: 715 STFTSTVGNEYPLNSDMTASSCVD----ESGFLQSSENGDQANQ----TNRIFVKVQKSG 766
Query: 559 IAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTDDEGDMMLAGDDQWP 616
+ GR++D++ Y +L EL +MF ++G L R W +V D E D++L GDD W
Sbjct: 767 -SFGRSLDISKFSSYHELRSELARMFGLEGLLEDPERSGWQLVIVDRENDVLLLGDDPWQ 825
Query: 617 EFCKMVKKIFIYSTEEVKNMA 637
EF V I I S EV+ M
Sbjct: 826 EFVNNVWYIKILSPYEVQQMG 846
>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
Length = 915
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 198/392 (50%), Positives = 265/392 (67%), Gaps = 18/392 (4%)
Query: 4 VEPNFGCSLSSQGGPGSGD-------LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQL 56
+ P+ G L Q PGS + L ELW ACAGPLV +P G RV YFPQGH EQ+
Sbjct: 3 LSPSAGGGLPDQ--PGSPEVAEEHKCLNSELWHACAGPLVSLPAVGSRVLYFPQGHSEQV 60
Query: 57 EASTNQELTHQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQ--TEPRSP 113
ASTN+E+ Q P + +LP +++C++ ++ + A+ ETDEV AQ+TL P + Q +P P
Sbjct: 61 SASTNKEIESQIPNYPNLPPQLICQLHNVIMHADAETDEVCAQMTLQPLSPQELKDPFLP 120
Query: 114 DQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDL 173
+ L KQ + FCK LTASDTSTHGGFSV R+ A + PPLD T P QEL AKDL
Sbjct: 121 AE-LGTANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDL 179
Query: 174 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQ 233
HG EW+F+HIFRGQP+RHLLTTGWS F+++KRLVAGD+ +F+ +N +L +G+RR Q
Sbjct: 180 HGNEWKFRHIFRGQPKRHLLTTGWSVFISAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQ 239
Query: 234 SSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-F 290
+ MPSSV+SS SMH+G+LA AAHA T++ F ++Y PR S+F+I L KY++AV+H
Sbjct: 240 TVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRI 299
Query: 291 SVGMRFKMRFEGEDSPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVS 349
SVGMRF+M FE E+S RR+ GTI G+ D +WP S WRS+K+ WDE +R RVS
Sbjct: 300 SVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVS 359
Query: 350 PWEIEPFVASAPLNLAQPAVKSKRPRSIDIPA 381
WEIEP + + P+ + ++ KRP +P+
Sbjct: 360 LWEIEP-LTTIPMYSSPFPMRLKRPWPTGLPS 390
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G AVGR +D+T Y +L EL +F ++GQL R W +VF D E D+
Sbjct: 784 TFVKVYKSG-AVGRLLDITRFSSYHELRSELGHLFGLEGQLEDPVRSGWQLVFVDRENDV 842
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
+L GDD W EF V I I S +EV+ M + SS
Sbjct: 843 LLVGDDPWQEFVNSVSCIKILSPQEVQQMGKQGIELLSS 881
>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
Length = 889
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 202/422 (47%), Positives = 270/422 (63%), Gaps = 28/422 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G V YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSGVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----PPKQTVHSFCKILTASD 136
++ + A+ ETDEVYAQ+TL P + Q + D CL P KQ + FCK LTASD
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSAQEQK---DVCLLPAELGIPSKQPTNYFCKTLTASD 138
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A + PPLD + P QEL AKDLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTG 198
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGDA +F+ EN +L +G+RR Q+ MPSSV+SS SMH+G+LA AAH
Sbjct: 199 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T++ F ++Y PR S+F+I L KY +AV+H SVGMRF+M FE E+S RR+ GT
Sbjct: 259 AAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYMGT 318
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + +++ K
Sbjct: 319 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFSLRLK 377
Query: 373 RP-------RSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDST 425
RP + D+ ++ W +G I + G V P Q ID++
Sbjct: 378 RPWPSLPGFPNGDMTMNSPLSWLRGDIGDQGIQSLNFQGYG-------VTPFMQPRIDAS 430
Query: 426 II 427
++
Sbjct: 431 ML 432
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PR 593
+ ++N + RT KV G + GR++D++ Y +L EL MF ++G L R
Sbjct: 742 QSSENGDQRNPTNRTFVKVHKSG-SFGRSLDISKFSNYHELRSELAHMFGLEGLLEDPER 800
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GDD W EF V I I S EV+ M
Sbjct: 801 SGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMG 844
>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
Length = 925
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/366 (52%), Positives = 253/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 41 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPSYPNLPPQLICQL 100
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ET+EVYAQ+TL P Q +P P + L KQ + FCK LTASDTST
Sbjct: 101 HNVTMQADAETEEVYAQMTLQPLNPQELKDPYLPAE-LGLVSKQPTNYFCKTLTASDTST 159
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL A DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 160 HGGFSVPRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKRHLLTTGWSV 219
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 220 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 279
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 280 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 339
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE R RVS WEIEP + + P + ++ KRP
Sbjct: 340 ISDLDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEP-LTTFPTYTSPFPLRLKRPW 398
Query: 376 SIDIPA 381
+P+
Sbjct: 399 PTGLPS 404
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G GR++D+T Y +L EL ++F ++GQL R W +VF D E D+
Sbjct: 793 TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDV 851
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
+L GDD W EF V I I S +EV+ M + SS
Sbjct: 852 LLVGDDPWQEFASTVSCIKILSPQEVQQMGKQGLELLSS 890
>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
Length = 895
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 256/365 (70%), Gaps = 9/365 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ET+EVYAQ+TL P + +Q EP P + L KQ + FCK LTASDTST
Sbjct: 82 HNVTMHADAETEEVYAQMTLQPLSPEEQKEPFLPIE-LGAGSKQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 201 FVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D SE+WP S WRS+K+ WDE + RVS WEIEP + + P+ ++ KRP
Sbjct: 321 ISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEP-LTTFPMYPTAFPLRLKRPW 379
Query: 376 SIDIP 380
+ +P
Sbjct: 380 ASGLP 384
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G ++GR++D+T Y +L ELE++F ++GQL R W +VF D E D+
Sbjct: 763 TFVKVYKSG-SLGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDI 821
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+L GDD W EF V I I S ++V+ M
Sbjct: 822 LLVGDDPWQEFVNSVWCIKILSPQDVQQMV 851
>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 886
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 253/363 (69%), Gaps = 7/363 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ET EVYAQ+TL P + +Q EP P + L Q + FCK LTASDTST
Sbjct: 82 HNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIE-LGAGSNQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 201 FVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRTSQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI +
Sbjct: 261 TNSRFTIFYNPRPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITCIS 320
Query: 319 DF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSI 377
D SE+WP S WRS+K+ WDE + RVS WEIEP +A A P ++ KRP +
Sbjct: 321 DLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFP-LRLKRPWAS 379
Query: 378 DIP 380
+P
Sbjct: 380 GLP 382
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G + GR++D+T Y +L ELE++F ++GQL R W +VF D E D+
Sbjct: 754 TFVKVYKSG-SPGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDI 812
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+L GDD W EF V I I S ++V+ M
Sbjct: 813 LLVGDDPWQEFVNSVWCIKILSPQDVQQMV 842
>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 793
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 178/356 (50%), Positives = 240/356 (67%), Gaps = 16/356 (4%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ AS + + P +DL +I CRVV+
Sbjct: 48 YIELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPMEMPTYDLQPQIFCRVVN 106
Query: 84 IELLAEQETDEVYAQITLHPETD---------QTEPRSPDQCLPE--PPKQTVHSFCKIL 132
I+LLA +E DEVY Q+TL P+ + + E D+ E P K T H FCK L
Sbjct: 107 IQLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTPHMFCKTL 166
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EW+F+HI+RGQPRRHL
Sbjct: 167 TASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 226
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV+ K LV+GDA +FLRGENGELR+G+RR A ++ +P S++ SQS + L+
Sbjct: 227 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGSQSYYPNFLS 286
Query: 253 TAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
+ A+A+ ++F V+Y PR S F + KY++++ + ++G RFKM+FE ++SPERR
Sbjct: 287 SVANAISAKSMFHVFYSPRASHADFAVPYQKYIKSIKNPVTIGTRFKMKFEMDESPERRC 346
Query: 311 T-GTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
T G + G+ D +WP SKWR L ++WDE + +RVSPWE++P + PL++
Sbjct: 347 TSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDPSASLPPLSI 402
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 485 SNTAAPLGRKVVDPTTGTSGVKGSARAASD--FDASQNQDLKEVKRGMADVSRKET-QNK 541
S P +K+ D +G + + + R +D F N K +SR+ T QN
Sbjct: 603 SGITIPNEQKLQDNISGAASLGANMRIPNDDNFKGKVNA----CKLFGFPLSRETTAQNL 658
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVF 600
Q S S R+ TKV QG VGRA+DL+ L Y+DL ELE++F ++G L P W +++
Sbjct: 659 QNS--SKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLIELERLFSMEGLLIDPNKGWRILY 716
Query: 601 TDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
TD E D+M+ GDD W EFC +V KI I++ EEV+ M
Sbjct: 717 TDSENDIMVVGDDPWHEFCDVVSKIHIHTQEEVEKM 752
>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
Length = 841
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 205/452 (45%), Positives = 281/452 (62%), Gaps = 30/452 (6%)
Query: 12 LSSQGGPGSGD--LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP 69
+S QG G L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ Q P
Sbjct: 8 MSQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIP 67
Query: 70 LF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQT 124
+ LP +++C++ ++ + A+ ETDEVYAQ+TL P T Q + D LP P KQ
Sbjct: 68 NYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQK---DTFLPMELGIPSKQP 124
Query: 125 VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIF 184
+ FCK LTASDTSTHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIF
Sbjct: 125 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIF 184
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ 244
RGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS
Sbjct: 185 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSD 244
Query: 245 SMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFE 301
SMH+G+LA AAHA T++ F V++ PR S+F+I L+KY++AV+H SVGMRF+M FE
Sbjct: 245 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFE 304
Query: 302 GEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
E+S RR+ GTI + D +WP S WRS+K+ WDE +R RVS WEIEP + +
Sbjct: 305 TEESSVRRYMGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTF 363
Query: 361 PLNLAQPAVKSKRPRSIDIP--------ASASAFWYQGSTQSHDITQVVGATEGQSSESQ 412
P+ + ++ KRP A+ W +G H + + G
Sbjct: 364 PMYPSLFPLRLKRPWHPGTSSFLDGRDEATNGLMWMRGGPGDHGLNAMNFQGAG------ 417
Query: 413 VVRPMRQKEIDSTIINNNSTDDHRIVAAQSVL 444
+ P Q +D T++ N+ ++ + A + L
Sbjct: 418 -LLPWMQPRLDPTLLGNDHNQQYQAMLAAAGL 448
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 429 NNSTDDHRIVAAQSVLSGYASSGRP------GNTVIHEEVERGKKSEASLGC-------W 475
N S H ++ QS +AS P GN++ H + S C
Sbjct: 589 NLSRSGHSMLTEQSPQQSWASKYSPSQVDAIGNSMSHVQYSGRDTSIVPPHCSSDAQNSV 648
Query: 476 LFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSAR--AASDFDASQNQDLKEVKRGMADV 533
LFG+++ ++ L V TT ++ S S F S +++ +
Sbjct: 649 LFGVNID---SSGLLLPTTVPRYTTASAHADASTMPLGESSFQGSPYPCMQDSSELLQSA 705
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP- 592
+ + QN+ T KV G +VGR++D++ Y +L +EL +MF I+G+
Sbjct: 706 GQVDAQNQ------TPIFVKVYKSG-SVGRSLDISRFNSYHELREELAQMFGIEGKFEDP 758
Query: 593 -RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
R W +VF D E D++L GDD W F V I I S E+++ M
Sbjct: 759 LRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMG 804
>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
Length = 820
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 207/452 (45%), Positives = 281/452 (62%), Gaps = 39/452 (8%)
Query: 12 LSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
LS Q G L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P
Sbjct: 8 LSQQAHEGENKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPN 67
Query: 71 F-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTV 125
+ LP +++C++ ++ + A+ ETDEVYAQ+TL P T Q + D +P P KQ
Sbjct: 68 YPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQK---DTYIPVELGIPSKQPT 124
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
+ FCK LTASDTSTHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFR
Sbjct: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKFRHIFR 184
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS S
Sbjct: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDS 244
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEG 302
MH+G+LA AAHA T++ F ++Y PR S+F+I L+KY++AV+H SVGMRF+M FE
Sbjct: 245 MHIGLLAAAAHAASTNSCFTIFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFET 304
Query: 303 EDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
E+S RR+ GTI G+GD +W S WRS+K+ WDE +R RVS WEIEP + + P
Sbjct: 305 EESSVRRYMGTITGIGDLDPIRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFP 363
Query: 362 LNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHD--------ITQVVGATEGQSSESQV 413
+ + ++ KRP WY G++ D +T + G T Q S
Sbjct: 364 MYPSLFPLRLKRP------------WYPGASSFQDGREGAVNGMTWLRGETGEQGLHSLN 411
Query: 414 VR-----PMRQKEIDSTIINNNSTDDHRIVAA 440
+ P Q+ +D+T N+ ++ + A
Sbjct: 412 FQNVGMFPWTQQRVDTTFARNDLNQQYQAMLA 443
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 479 IDLKHNSNTAAPLGRKVVDPTT----GTSGVKGSARA----ASDFDASQN---QDLKEVK 527
+D ++++ A + ++ PTT GTS V + AS F +S QD E+
Sbjct: 639 LDGQNHALFGANIDPGLLLPTTLSSIGTSSVNADVSSMPLGASGFQSSLYGCMQDSSELL 698
Query: 528 RGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ 587
A V + RT KV G +VGR++D++ Y++L +EL +MF I+
Sbjct: 699 HSAAQVD---------PPTANRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE 748
Query: 588 GQLRP--RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
G L+ R W +VF D E D++L GD W F V I I S E+V +
Sbjct: 749 GLLKDPQRSGWQLVFVDREDDVLLLGDGPWEAFVNNVWYIKILSPEDVLKLG 800
>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
Length = 846
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 203/440 (46%), Positives = 277/440 (62%), Gaps = 38/440 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + D LP P KQ + FCK LTASDT
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQK---DTFLPVELGIPSKQPTNYFCKTLTASDT 137
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 197
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 198 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 257
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 258 AATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 317
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 318 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 376
Query: 374 PRSIDIPASASAFWYQGSTQSHD--------ITQVVGATEGQSSESQVVR-----PMRQK 420
P W+ G++ HD + + G T Q +S + P Q+
Sbjct: 377 P------------WHPGASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQTVGMFPWTQQ 424
Query: 421 EIDSTIINNNSTDDHRIVAA 440
+D T + N+ ++ + A
Sbjct: 425 RLDPTFLGNDHNQQYQAMLA 444
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
+RT KV G +VGR++D+T Y +L +EL +MF I+G+L R W +VF D E
Sbjct: 718 SRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDREN 776
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E+V+ M
Sbjct: 777 DVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 808
>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 842
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 203/443 (45%), Positives = 279/443 (62%), Gaps = 38/443 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLVCQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQK---DTFLPMELGVPSKQPSNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F V+Y PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 375
Query: 374 PRSIDIPASASAFWYQGSTQSHD--------ITQVVGATEGQSSES-----QVVRPMRQK 420
P W+ G++ HD + + G Q+ S + P Q+
Sbjct: 376 P------------WHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPWMQQ 423
Query: 421 EIDSTIINNNSTDDHRIVAAQSV 443
+D T++ N+ ++ + A +
Sbjct: 424 RMDPTLLGNDHNQQYQAMFASGL 446
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
TRT KV G +VGR++D++ Y +L +EL +MF I+G+L R W +VF D E
Sbjct: 715 TRTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDREN 773
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E++ M
Sbjct: 774 DVLLLGDDPWESFVNNVWYIKILSPEDIHKMG 805
>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
Length = 897
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 257/365 (70%), Gaps = 9/365 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ET+EVYAQ+TL P + +Q +P P + L KQ + FCK LTASDTST
Sbjct: 82 HNVTMHADAETEEVYAQMTLQPLSPEEQKDPFLPIE-LGAGSKQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 201 FVSAKRLVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D SE+WP S WRS+K+ WDE + RVS WEIEP + + P+ ++ KRP
Sbjct: 321 ISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEP-LTTFPMYPTAFPLRLKRPW 379
Query: 376 SIDIP 380
+ +P
Sbjct: 380 ASGLP 384
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTDDEGDM 607
T KV G ++GR++D+T Y +L ELE++F ++GQL R W +VF D E D+
Sbjct: 764 TFVKVYKSG-SLGRSLDITRFGSYYELRVELERLFGLEGQLEDPARSGWQLVFVDRENDV 822
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+L GDD W EF V I I S ++++ MA
Sbjct: 823 LLLGDDPWQEFVNSVGCIKILSPQDLQQMA 852
>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 280/450 (62%), Gaps = 32/450 (7%)
Query: 11 SLSSQGGPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ 67
S S GG +G+ L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+
Sbjct: 4 STSGLGGQQAGEKKCLNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEVDAH 63
Query: 68 EPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPK 122
P + LP +++C++ ++ + A+ ETDEVYAQ+TL P T Q + + LP P K
Sbjct: 64 IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKET---FLPMDLGMPSK 120
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
Q + FCK LTASDTSTHGGFSV R+ A + PPLD T P QEL A+DLH EW+F+H
Sbjct: 121 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRH 180
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS 242
IFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+S
Sbjct: 181 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLS 240
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMR 299
S SMH+G+LA AAHA T++ F V+Y PR S+F+I L+KY++AV H SVGMRF+M
Sbjct: 241 SDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRML 300
Query: 300 FEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
FE E+S RR+ GTI G+ D +WP S WRS+K+ WDE +R RVS WEIEP +
Sbjct: 301 FETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LT 359
Query: 359 SAPLNLAQPAVKSKRPRSIDIP--------ASASAFWYQGSTQSHDITQVVGATEGQSSE 410
+ P+ + ++ KRP P AS W +G + + +
Sbjct: 360 TFPMYPSLFPLRLKRPWHPGSPSLLDSRDEASNGLMWLRGGSGEPGLPSLNFQAN----- 414
Query: 411 SQVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
+ P Q+ +D T++ N+ ++ + A
Sbjct: 415 ---MLPWMQQRLDPTMLGNDHNQRYQAMLA 441
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G +VGR++D++ Y +L EL +MF I+G+L R W +VF D E D+
Sbjct: 719 TFVKVYKSG-SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDV 777
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+L GDD W F V I I S E+V +
Sbjct: 778 LLLGDDPWELFVNNVWYIKILSPEDVLKLG 807
>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
Length = 844
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 206/445 (46%), Positives = 281/445 (63%), Gaps = 38/445 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+EL P + +LP +++C +
Sbjct: 20 LNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKELDIHIPNYPNLPPQLICPL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + D LP P +Q + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTLQEQK---DTYLPVELGIPSRQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ FIV++ PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 ASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+GD +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 375
Query: 374 PRSIDIPASASAFWYQGSTQSHD----ITQVVGATEGQSSE---------SQVVRPMRQK 420
P +YQG++ D + G + E S + P Q+
Sbjct: 376 P------------FYQGTSSYQDSNNEAINRMSWLRGNAGELGHHSMNLQSFGMLPWMQQ 423
Query: 421 EIDSTIINNNSTDDHRIVAAQSVLS 445
+DSTI+ N+ ++ + A + S
Sbjct: 424 RVDSTILPNDINQHYQAMLATGLQS 448
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 546 ASTRTRTKVQM-QGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTD 602
A T RT V++ + ++GR++D+T Y +L EL +MF I+G L R W +VF D
Sbjct: 712 AQTVPRTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGLLEDPQRSGWQLVFVD 771
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
E D++L GDD W EF V I I S E+V+ +
Sbjct: 772 RENDVLLLGDDPWEEFVNNVWYIKILSPEDVQKLG 806
>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/371 (51%), Positives = 257/371 (69%), Gaps = 9/371 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 24 LNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 83
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + +Q EP P + L KQ + FCK LTASDTST
Sbjct: 84 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPIE-LGAASKQPTNYFCKTLTASDTST 142
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD +L P QEL AKDLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 143 HGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSV 202
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+R Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 203 FVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 262
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+FII L KY+++V+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 263 TNSRFTIFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMGTITT 322
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE ++ RVS WEIEP + + P+ ++ KRP
Sbjct: 323 ISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP-LTTFPMYPTAFPLRLKRPW 381
Query: 376 SIDIPASASAF 386
+ +P+ F
Sbjct: 382 ASGMPSMHGMF 392
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 562 GRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDMMLAGDDQWPEFC 619
GR++D+T Y +L ELE +F ++GQL R W +VF D E D++L GDD W EF
Sbjct: 769 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 828
Query: 620 KMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTA 653
V I I S +EV+ M + + SS G A
Sbjct: 829 NSVGCIKILSPQEVQRMVRGGEGLLSSAPGARMA 862
>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 836
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 205/440 (46%), Positives = 275/440 (62%), Gaps = 38/440 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + +LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + D LP P +Q + FCK LTASDT
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTAQEQK---DTFLPMELGIPSRQPTNYFCKTLTASDT 137
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL AKDLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTTGW 197
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 198 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 257
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F V+Y PR S+F+I L KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 258 AATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 317
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 318 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 376
Query: 374 PRSIDIPASASAFWYQGSTQSHD-----------ITQVVGATEGQSSESQVVR--PMRQK 420
P W+ G + HD + VG S Q V P Q+
Sbjct: 377 P------------WHPGVSSVHDNREDASNGLMWLRGGVGEQGLHSLNLQSVSSLPWLQQ 424
Query: 421 EIDSTIINNNSTDDHRIVAA 440
+DS++ N+ ++ + A
Sbjct: 425 RLDSSMFGNDHNQQYQAMLA 444
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP---RDKWAVVFTDDE 604
TRT KV G +VGR++D++ Y +L +EL +MF I+GQL R W +VF D E
Sbjct: 709 TRTFVKVYKTG-SVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVDRE 767
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E+ + +
Sbjct: 768 NDVLLLGDDPWEAFVNNVGFIKILSPEDFQKLG 800
>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
Length = 826
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/458 (45%), Positives = 283/458 (61%), Gaps = 39/458 (8%)
Query: 12 LSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
L QG G L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P
Sbjct: 8 LGQQGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPN 67
Query: 71 F-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTV 125
+ LP +++C++ ++ + A+ ETDEVYAQ+TL P T Q + D LP P KQ
Sbjct: 68 YPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQK---DTFLPMELGMPSKQPT 124
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
+ FCK LTASDTSTHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFR
Sbjct: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFR 184
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS S
Sbjct: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDS 244
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEG 302
MH+G+LA AAHA T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE
Sbjct: 245 MHIGLLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFET 304
Query: 303 EDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
E+S RR+ GTI G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P
Sbjct: 305 EESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFP 363
Query: 362 LNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHD--------ITQVVGATEGQSSES-- 411
+ + ++ +RP W+ G + HD + + G T Q S
Sbjct: 364 MYPSLFPLRLRRP------------WHPGPSSLHDNRDEAGNGLMWLRGGTGDQGLHSLN 411
Query: 412 -QVVR--PMRQKEIDSTIINNNSTDDHRIVAAQSVLSG 446
Q V P Q+ +D ++ N+ ++ + A + +G
Sbjct: 412 FQAVNMFPWSQQRLDPALLGNDQNQWYQAMLASGLQNG 449
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
+RT KV G +VGR++D++ Y +L +EL +MF I+G+L R W +VF D E
Sbjct: 724 SRTFVKVYKLG-SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDREN 782
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E+V+ M
Sbjct: 783 DVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 814
>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 846
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/443 (45%), Positives = 279/443 (62%), Gaps = 38/443 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTPQEQK---DTFLPMELGVPSKQPSNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F V+Y PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 375
Query: 374 PRSIDIPASASAFWYQGSTQSHD--------ITQVVGATEGQSSESQVVR-----PMRQK 420
P W+ G++ HD + + G Q+ S + P Q+
Sbjct: 376 P------------WHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPWMQQ 423
Query: 421 EIDSTIINNNSTDDHRIVAAQSV 443
+D T++ N+ ++ + A +
Sbjct: 424 RMDPTLLANDHNQHYQAMFASGL 446
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
TRT KV G +VGR++D++ Y +L +EL +MF I+G+L R W +VF D E
Sbjct: 719 TRTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDREN 777
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E++ M
Sbjct: 778 DVLLLGDDPWESFVNNVWYIKILSPEDIHKMG 809
>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 884
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/366 (52%), Positives = 252/366 (68%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P +Q E P + L P KQ + FCKILTASDTST
Sbjct: 80 HNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAE-LGTPSKQPTNYFCKILTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 319 ISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 377
Query: 376 SIDIPA 381
+P+
Sbjct: 378 PPGLPS 383
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 547 STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDE 604
+ +T KV G + GR++D+T Y +L EL +MF ++G+L R W +VF D E
Sbjct: 749 TNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 807
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
D++L GD WPEF V I I S +EV+ M + + +SV
Sbjct: 808 NDVLLLGDGPWPEFVNSVGCIKILSPQEVQQMGNNGLELLNSV 850
>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 255/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q +P P + L KQ + FCK LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAE-LGTASKQPTNYFCKTLTASDTST 145
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ ++ +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 206 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 266 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 326 ISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 384
Query: 376 SIDIPA 381
+P+
Sbjct: 385 PTGLPS 390
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G VGR +D+T Y +L E+ ++F ++GQL R W +VF D E D+
Sbjct: 778 TFVKVYKSG-TVGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDV 836
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+L GDD W EF V I I S +EV+ M
Sbjct: 837 LLVGDDPWQEFVNSVSCIKILSPQEVQQMG 866
>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
Length = 908
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/439 (46%), Positives = 277/439 (63%), Gaps = 30/439 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P +Q E P + L P KQ + FCK LTASDTST
Sbjct: 80 HNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAE-LGTPSKQPTNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 319 ICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 377
Query: 376 SIDIPA-----------SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDS 424
+P+ S+ W + + + G V P Q D
Sbjct: 378 PPGLPSFHGMKDDDFGMSSPLMWLRDTDRGLQSLNYQGIG---------VNPWMQPRFDP 428
Query: 425 TIINNNSTDDHRIVAAQSV 443
++N TD ++ VAA ++
Sbjct: 429 AMLNMQ-TDMYQAVAAAAL 446
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAV 598
+QG+ +T KV G + GR++D+T Y++L EL +MF ++G+L R W +
Sbjct: 767 EQGNNPLNKTFVKVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQL 825
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
VF D E D++L GD WPEF V I I S EEV+ M + + +SV
Sbjct: 826 VFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQQMGNTGLGLLNSV 874
>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
Length = 775
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/268 (68%), Positives = 213/268 (79%), Gaps = 4/268 (1%)
Query: 118 PEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYE 177
P P+ SFCK LTASDTSTHGGFSVLR+HA ECLPPLDM P QEL AKDLHG
Sbjct: 8 PPHPRSGACSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVG 67
Query: 178 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMP 237
W F+HIFRGQPRRHLLTTGWS FV+SKRL+AGDAF+FLRG+NGELRVGVRR QQ+++
Sbjct: 68 WHFRHIFRGQPRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVS 127
Query: 238 SSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMR 295
SSVISS SMHLGV+ATA+HAV T T+F VYYKPRTS FII KY+EA+++ FSVGMR
Sbjct: 128 SSVISSHSMHLGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAMNNNFSVGMR 187
Query: 296 FKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
FKMRFEGE++PE+RF GTI+G GD +WPGSKWRSLK+QWDE + V RPERVSPWEIE
Sbjct: 188 FKMRFEGEEAPEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIE 247
Query: 355 PFVASAPLNLAQPAVKSKRPRSIDIPAS 382
+A L+ P ++KRPR +P+S
Sbjct: 248 LIATAAALS-PLPVSRNKRPRENLLPSS 274
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 109/231 (47%), Gaps = 29/231 (12%)
Query: 458 IHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTG--TSGVKGSARAASDF 515
I + E G + ++ C LFG L NS + ++ TG + R
Sbjct: 533 IATDTEMGPTAPSANNCKLFGFQLVDNSVVSESTTPVIIGSVTGEDMQAAVHAPRENLSQ 592
Query: 516 DASQNQDLKEVKRGMADV-------------SRKETQNKQGSAASTRTRTKVQMQGIAVG 562
A +Q + K +D S KETQ + + S R+ TKVQ QG A G
Sbjct: 593 PAELDQQSEPSKTSKSDPPTSSCEREKWSQRSSKETQFR-AESNSFRSHTKVQKQGSAFG 651
Query: 563 RAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWP----- 616
RAVDL +GY + ELE+MF I+G+L PR W VV+TD+EGDMML GD W
Sbjct: 652 RAVDLMKFEGYPEFIHELEQMFNIEGELEDPRKGWLVVYTDNEGDMMLVGDHPWQEFLHP 711
Query: 617 ---EFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSET 664
EFC++ KI+IY+ EEV+ M +EG S+D + ET
Sbjct: 712 INREFCRIAHKIYIYTREEVEKMTPWQTLDGKKIEGR----SVDGPVIRET 758
>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
Length = 899
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 256/365 (70%), Gaps = 9/365 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 25 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 84
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + +Q EP P + L KQ + FCK LTASDTST
Sbjct: 85 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPME-LGAASKQPTNYFCKTLTASDTST 143
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 203
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR QQ+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 204 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 264 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITS 323
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE T + RVS WEIEP + + P+ + ++ KRP
Sbjct: 324 ISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEP-LTTFPMYPSAFPLRLKRPW 382
Query: 376 SIDIP 380
+ +P
Sbjct: 383 ASGLP 387
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G ++GR++D++ Y +L ELE++F ++GQL R W +VF D E D+
Sbjct: 767 TFVKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDI 825
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
+L GDD W EF V I I S +EV+ + + SS
Sbjct: 826 LLVGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSS 864
>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
Group]
gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
Length = 899
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 256/365 (70%), Gaps = 9/365 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 25 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 84
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + +Q EP P + L KQ + FCK LTASDTST
Sbjct: 85 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPME-LGAASKQPTNYFCKTLTASDTST 143
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 203
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR QQ+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 204 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 264 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITS 323
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE T + RVS WEIEP + + P+ + ++ KRP
Sbjct: 324 ISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEP-LTTFPMYPSAFPLRLKRPW 382
Query: 376 SIDIP 380
+ +P
Sbjct: 383 ASGLP 387
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G ++GR++D++ Y +L ELE++F ++GQL R W +VF D E D+
Sbjct: 767 TFVKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDI 825
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
+L GDD W EF V I I S +EV+ + + SS
Sbjct: 826 LLVGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSS 864
>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 277/433 (63%), Gaps = 27/433 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 8 LNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQL 67
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP----EPPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + + LP P KQ + FCK LTASDT
Sbjct: 68 HNVTMHADVETDEVYAQMTLQPLTPQEQKET---FLPLDLGMPSKQPTNYFCKTLTASDT 124
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD T P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 125 STHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 244
Query: 258 VKTSTLFIVYYKPR---TSQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
T++ F V+Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GT
Sbjct: 245 AATNSCFTVFYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRRYMGT 304
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G D +WP S WRS+K+ WDE +R RVS WEIEP + S P+ + ++ K
Sbjct: 305 ITGTSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTSFPMYPSLFPLRLK 363
Query: 373 RP-----RSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTII 427
RP S+ AS W +G + Q + + Q++ + P Q+ +D T++
Sbjct: 364 RPWHPGSSSLLDEASNGLIWLRGGSGE----QGLPSLNFQAN----MLPWMQQRLDPTML 415
Query: 428 NNNSTDDHRIVAA 440
N+ ++ + A
Sbjct: 416 GNDHNQQYQAMLA 428
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
+RT KV G +VGR++D++ Y +L +EL +MF I+G+L R W +VF D E
Sbjct: 695 SRTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDREN 753
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E+V M
Sbjct: 754 DVLLLGDDPWELFVNNVWYIKILSPEDVLKMG 785
>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
Length = 880
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 256/365 (70%), Gaps = 9/365 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 6 LNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 65
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + +Q EP P + L KQ + FCK LTASDTST
Sbjct: 66 HNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPME-LGAASKQPTNYFCKTLTASDTST 124
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 125 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 184
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR QQ+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 185 FVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAA 244
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 245 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITS 304
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE T + RVS WEIEP + + P+ + ++ KRP
Sbjct: 305 ISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEP-LTTFPMYPSAFPLRLKRPW 363
Query: 376 SIDIP 380
+ +P
Sbjct: 364 ASGLP 368
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G ++GR++D++ Y +L ELE++F ++GQL R W +VF D E D+
Sbjct: 748 TFVKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDI 806
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
+L GDD W EF V I I S +EV+ + + SS
Sbjct: 807 LLVGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSS 845
>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 854
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 205/440 (46%), Positives = 274/440 (62%), Gaps = 38/440 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + +LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A ETDEVYAQ+TL P T Q + D LP P +Q + FCK LTASDT
Sbjct: 81 HNVTMHAVVETDEVYAQMTLQPLTAQEQK---DTFLPMELGIPSRQPTNYFCKTLTASDT 137
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL AKDLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTTGW 197
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 198 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 257
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F V+Y PR S+F+I L KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 258 AATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 317
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 318 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 376
Query: 374 PRSIDIPASASAFWYQGSTQSHD-----------ITQVVGATEGQSSESQVVR--PMRQK 420
P W+ G + HD + VG S Q V P Q+
Sbjct: 377 P------------WHPGVSSVHDNREDASNGLMWLRGGVGEQGLHSLNLQSVSSLPWLQQ 424
Query: 421 EIDSTIINNNSTDDHRIVAA 440
+DS++ N+ ++ + A
Sbjct: 425 RLDSSMFGNDHNQQYQAMLA 444
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP---RDKWAVVFTDDE 604
TRT KV G +VGR++D++ Y +L +EL +MF I+GQL R W +VF D E
Sbjct: 727 TRTFVKVYKTG-SVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVDRE 785
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E+ + +
Sbjct: 786 NDVLLLGDDPWEAFVNNVGFIKILSPEDFQKLG 818
>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
Length = 911
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 253/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q +P P + L KQ + FCK LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAE-LGTASKQPTNYFCKTLTASDTST 145
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD P QEL A DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKRHLLTTGWSV 205
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 260 TSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S +F+I + KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 266 TNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +WP S WRS+K+ WDE ++ RVS WEIEP + + P+ + A+ KRP
Sbjct: 326 ISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP-LTTFPMYPSPFALGLKRPW 384
Query: 376 SIDIPA 381
+P+
Sbjct: 385 PTGLPS 390
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
Query: 511 AASDFDASQNQDLKEV----KRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVD 566
++S D NQ L + G A + Q Q A T KV G VGR +D
Sbjct: 741 SSSQNDFPLNQSLHSAGCLDESGYAPCAENSEQANQQFA----TFVKVYKSG-NVGRLLD 795
Query: 567 LTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKK 624
+T YD+L E+ ++F ++GQL R W +VF D E D++L GDD W EF V
Sbjct: 796 ITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSC 855
Query: 625 IFIYSTEEVKNMATSSKPIASSVEGEGTAISLDS 658
I I S EEV+ M + SS + DS
Sbjct: 856 IKILSPEEVQQMGKPGIQLLSSAPSRRLSNGCDS 889
>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
Length = 934
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 189/371 (50%), Positives = 258/371 (69%), Gaps = 9/371 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 63 LNSELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLPPQLICQL 122
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + +Q EP P + L KQ + FCK LTASDTST
Sbjct: 123 HNVTMHADVETDEVYAQMTLQPLSPEEQKEPFLPIE-LGAASKQPTNYFCKTLTASDTST 181
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD +L P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 182 HGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 241
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+R Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 242 FVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAAAAHAAA 301
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR+ S+F+I L KY+++V+H SVGMRF+M FE E+S RR+ GT+
Sbjct: 302 TNSRFTIFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMGTVTA 361
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE ++ RVS WEIEP + + P+ ++ KRP
Sbjct: 362 ISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP-LTTFPMYPTAFPLRLKRPW 420
Query: 376 SIDIPASASAF 386
+ +P+ F
Sbjct: 421 ASGLPSMHGMF 431
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G + GR++D+T Y +L ELE +F ++GQL R W +VF D E D+
Sbjct: 802 TFVKVYKSG-SPGRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDI 860
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
+L GDD W EF V I I S ++V M + + + S+
Sbjct: 861 LLVGDDPWQEFVNSVWCIKILSPQDVHQMVRNGEGLLSA 899
>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
Length = 868
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 253/369 (68%), Gaps = 14/369 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 9 LNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQL 68
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-----PKQTVHSFCKILTASD 136
++ + A+ ETDEVYAQ+TL P T Q + D CL KQ + FCK LTASD
Sbjct: 69 HNVTMDADVETDEVYAQMTLQPLTPQEQK---DVCLLPAELGTLSKQPSNYFCKTLTASD 125
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A + PPLD + P QEL KDLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 126 TSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLTTG 185
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGD+ +F+ EN +L +G+RR Q+ +PSSV+SS SMH+G+LA AAH
Sbjct: 186 WSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAAAH 245
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T++ F +++ PR S+F+I L KY +AV+H SVGMRF+M FE E+S RR+ GT
Sbjct: 246 AAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSIRRYMGT 305
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G+GD +WP S W+S+K+ WDE +R RVS WEIEP + + P+ + +++ K
Sbjct: 306 ITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFSLRLK 364
Query: 373 RPRSIDIPA 381
RP +P+
Sbjct: 365 RPWPPGLPS 373
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 450 SGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDP---TTGTSGVK 506
S PG V+ + ++ A LFG++ N +P + P +T TS V
Sbjct: 645 SPNPGRQVLDYQAVAVSQNNA-----LFGVNGMSNLKGNSPENGSLPVPYATSTFTSTVG 699
Query: 507 GSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQM-QGIAVGRAV 565
G SD S D V + +V + A++ T T V++ + + GR++
Sbjct: 700 GEYPVNSDMTTSSCVDESGVLQSSENVDQ----------ANSLTETFVKVYKSESFGRSL 749
Query: 566 DLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
D++ Y++L EL +MF ++G L R W +VF D E D++L GDD W EF V
Sbjct: 750 DISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHEFVNSVW 809
Query: 624 KIFIYSTEEVKNMA 637
I I S EV+ M
Sbjct: 810 YIKILSPLEVQQMG 823
>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
Length = 849
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 280/446 (62%), Gaps = 32/446 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ Q P + LP +++C++
Sbjct: 23 LNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLVCQL 82
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T + + D LP P KQ + FCK LTASDT
Sbjct: 83 HNVTMHADVETDEVYAQMTLQPLTPEEQK---DTFLPMELGIPSKQPSNYFCKTLTASDT 139
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 140 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 199
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 200 SIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHA 259
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F V+Y PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 260 SATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTI 319
Query: 315 VGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D + +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 320 TGISDLDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 378
Query: 374 PRSIDIP--------ASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDST 425
P A+ + W +G + + G + P Q+ +D T
Sbjct: 379 PWHPGTSSLLDGRDEATNALMWMRGGPADQGLNSLNFQGAG-------MLPWMQQRLDPT 431
Query: 426 IINNNSTDDHRIVAA----QSVLSGY 447
++ N+ ++ + A Q++ GY
Sbjct: 432 LLGNDQNQQYQAMLAAAGMQNMGGGY 457
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 20/139 (14%)
Query: 501 GTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIA 560
G SG +GS A D+S Q+ +++ +TQN+ T KV G +
Sbjct: 692 GESGFQGSLYACMQ-DSSFLQNAEQI----------DTQNQ------NPTFVKVYKSG-S 733
Query: 561 VGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDMMLAGDDQWPEF 618
VGR++D++ Y +L +EL +MF I+G+L R W +VF D E D++L GDD W F
Sbjct: 734 VGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESF 793
Query: 619 CKMVKKIFIYSTEEVKNMA 637
V I I S E+++ M
Sbjct: 794 VNNVWYIKILSPEDIQKMG 812
>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
Length = 881
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 253/369 (68%), Gaps = 14/369 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-----PKQTVHSFCKILTASD 136
++ + A+ ETDEVYAQ+TL P T Q + D CL KQ + FCK LTASD
Sbjct: 82 HNVTMDADVETDEVYAQMTLQPLTPQEQK---DVCLLPAELGTLSKQPSNYFCKTLTASD 138
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A + PPLD + P QEL KDLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLTTG 198
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGD+ +F+ EN +L +G+RR Q+ +PSSV+SS SMH+G+LA AAH
Sbjct: 199 WSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAAAH 258
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T++ F +++ PR S+F+I L KY +AV+H SVGMRF+M FE E+S RR+ GT
Sbjct: 259 AAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFQMLFETEESSIRRYMGT 318
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G+GD +WP S W+S+K+ WDE +R RVS WEIEP + + P+ + +++ K
Sbjct: 319 ITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFSLRLK 377
Query: 373 RPRSIDIPA 381
RP +P+
Sbjct: 378 RPWPPGLPS 386
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 450 SGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDP---TTGTSGVK 506
S PG V+ + ++ A LFG++ N +P + P +T TS V
Sbjct: 658 SPNPGRQVLDYQAVAVSQNNA-----LFGVNGMSNLKGNSPENGSLPVPYATSTFTSTVG 712
Query: 507 GSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQM-QGIAVGRAV 565
G SD S D V + +V + A++ T T V++ + + GR++
Sbjct: 713 GEYPVNSDMTTSSCVDESGVLQSSENVDQ----------ANSLTETFVKVYKSESFGRSL 762
Query: 566 DLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
D++ Y++L EL +MF ++G L R W +VF D E D++L GDD W EF V
Sbjct: 763 DISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHEFVNSVW 822
Query: 624 KIFIYSTEEVKNMA 637
I I S EV+ M
Sbjct: 823 YIKILSPLEVQQMG 836
>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
Length = 881
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 253/365 (69%), Gaps = 9/365 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 15 LNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 74
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ET EVYAQ+TL P + +Q EP P + L Q + FCK LTASDTST
Sbjct: 75 HNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIE-LGAGSNQPTNYFCKTLTASDTST 133
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 134 HGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 193
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 194 FVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 253
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 254 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITC 313
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D SE+WP S WRS+K+ WDE + RVS WEIEP +A A P ++ KRP
Sbjct: 314 ISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFP-LRLKRPW 372
Query: 376 SIDIP 380
+ +P
Sbjct: 373 ASGLP 377
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G + GR++D+T Y +L ELE++F ++GQL R W +VF D E D+
Sbjct: 749 TFVKVYKSG-SPGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDI 807
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+L GDD W EF V I I S ++V+ M
Sbjct: 808 LLVGDDPWQEFVNSVWCIKILSPQDVQQMV 837
>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 904
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 205/446 (45%), Positives = 281/446 (63%), Gaps = 30/446 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRS--PDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P Q + + P + L P KQ + FCKILTASDTST
Sbjct: 80 HNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAE-LGTPSKQPTNYFCKILTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D S +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 319 ISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 377
Query: 376 SIDIP-----------ASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDS 424
+P ++S W + + + G V P Q +D
Sbjct: 378 PPGLPLFHGLKDDDFGINSSLMWLRDTDRGLPSLNFQGIG---------VSPWMQPRLDP 428
Query: 425 TIINNNSTDDHRIVAAQSVLSGYASS 450
+++N S D ++ +AA ++ + S+
Sbjct: 429 SMVNYQS-DMYQAMAAAALQDMWTSN 453
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 547 STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDE 604
S +T KV G + GR++D+T Y +L EL +MF ++G+L R W +VF D E
Sbjct: 775 SNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 833
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
D++L GD WPEF V I I S +EV+ M + + +SV
Sbjct: 834 NDVLLLGDGPWPEFVNSVGYIKILSPQEVQQMGNNELELLNSV 876
>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 897
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 252/366 (68%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P +Q E P + L KQ + FCK LTASDTST
Sbjct: 80 HNMTMHADVETDEVYAQMTLQPLNPQEQNEAYLPAE-LGTASKQPTNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+GD +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 319 IGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSSFPLRLKRPW 377
Query: 376 SIDIPA 381
+P+
Sbjct: 378 PPGLPS 383
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
+T KV G + GR++D+T Y +L EL +MF ++G+L R W +VF D E
Sbjct: 763 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 821
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
D++L GD WPEF V I I S +EV+ M + + +SV +
Sbjct: 822 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPNQ 866
>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
gi|219886495|gb|ACL53622.1| unknown [Zea mays]
gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 888
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 253/365 (69%), Gaps = 9/365 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ET EVYAQ+TL P + +Q EP P + L Q + FCK LTASDTST
Sbjct: 82 HNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIE-LGAGSNQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 201 FVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITC 320
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D SE+WP S WRS+K+ WDE + RVS WEIEP +A A P ++ KRP
Sbjct: 321 ISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFP-LRLKRPW 379
Query: 376 SIDIP 380
+ +P
Sbjct: 380 ASGLP 384
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G + GR++D+T Y +L ELE++F ++GQL R W +VF D E D+
Sbjct: 756 TFVKVYKSG-SPGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDI 814
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+L GDD W EF V I I S ++V+ M
Sbjct: 815 LLVGDDPWQEFVNSVWCIKILSPQDVQQMV 844
>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 781
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 191/365 (52%), Positives = 253/365 (69%), Gaps = 9/365 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ET EVYAQ+TL P + +Q EP P + L Q + FCK LTASDTST
Sbjct: 82 HNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIE-LGAGSNQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 201 FVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITC 320
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D SE+WP S WRS+K+ WDE + RVS WEIEP +A A P ++ KRP
Sbjct: 321 ISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFP-LRLKRPW 379
Query: 376 SIDIP 380
+ +P
Sbjct: 380 ASGLP 384
>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
Length = 870
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/378 (51%), Positives = 258/378 (68%), Gaps = 18/378 (4%)
Query: 4 VEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE 63
++P+ G + S+G L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E
Sbjct: 1 MKPSGGGAFPSEGE--RRTLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRE 58
Query: 64 LTHQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRS---PDQCLPE 119
L Q P + LP +++C + ++ + A+ ETDEVYAQ+TL P + Q + S PD L
Sbjct: 59 LDVQIPNYTSLPPQLICHLHNVTMNADVETDEVYAQMTLQPLSLQEQKESYFVPD--LGS 116
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
P KQ + FC LTASDTSTHGGFS+ R+ A + P LD T P QEL A+DLH EW+
Sbjct: 117 PSKQPSNYFCXTLTASDTSTHGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWK 176
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
F+HI+RGQP+RHLLTTGWS FV++KRLVAGD+ +F+R ++G+L +G+RR + MPSS
Sbjct: 177 FRHIYRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSS 236
Query: 240 VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRF 296
V+SS SMH+GVLA AAHA T++ F ++Y PR S+F+I +KY +AV+H SVG+RF
Sbjct: 237 VLSSDSMHIGVLAAAAHAAATNSPFNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRF 296
Query: 297 KMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
+M FE E+S RR+ GTI G+GD +WP S+WRSLK+ WDE +R RVS WEIEP
Sbjct: 297 RMLFETEESGVRRYMGTITGIGDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEP 356
Query: 356 ---FVASAP---LNLAQP 367
F+ P LNL +P
Sbjct: 357 LTTFLMYPPPYSLNLKRP 374
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP-RDKWAVVFTDDEGD 606
TRT TKV G ++GR++D+T GY +L EL +MF ++GQL R W +VF D E D
Sbjct: 737 TRTFTKVYKLG-SIGRSIDVTRFSGYPELRCELARMFNLEGQLEDCRSGWQLVFVDKEND 795
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
++L GDD W EF V+ I I S EV+ M + +S+
Sbjct: 796 VLLLGDDPWEEFVINVRYIKILSPPEVQQMTQEGMELLNSI 836
>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
Length = 914
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 253/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + LP +++C++
Sbjct: 27 LNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q +P P + L Q + FCK LTASDTST
Sbjct: 87 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAE-LGTASNQPTNYFCKTLTASDTST 145
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD P QEL AKDLHG +W+F+HIFRGQP+RHLLTTGWS
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTGWSV 205
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 206 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 265
Query: 260 TSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S +F+I + KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 266 TNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 325
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +WP S WRS+K+ WDE ++ RVS WEIEP + + P+ + A+ KRP
Sbjct: 326 ISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP-LTTFPMYPSPFALGLKRPW 384
Query: 376 SIDIPA 381
+P+
Sbjct: 385 PAGLPS 390
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKW 596
+N + + T KV G VGR +D+T YD+L E+ ++F ++GQL R W
Sbjct: 772 ENAEQANQQFATFVKVYKSG-TVGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGW 830
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISL 656
+VF D E D++L GDD W EF V I I S EEV+ M + SS
Sbjct: 831 QLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGC 890
Query: 657 DS 658
DS
Sbjct: 891 DS 892
>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 908
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 277/441 (62%), Gaps = 32/441 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P + Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQK---DAYLPAELGVPSKQPSNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L KY +AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKR 375
Query: 374 P-----------RSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
P + D+ ++ W +G I + G V P Q +
Sbjct: 376 PWPPGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIG-------VNPWMQPRL 428
Query: 423 DSTIINNNSTDDHRIVAAQSV 443
D++++ TD ++ +AA ++
Sbjct: 429 DASMLGLQ-TDMYQAMAAAAL 448
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
TRT KV G + GR++D+T Y +L EL +MF ++GQL R W +VF D E
Sbjct: 774 TRTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREN 832
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
D++L GDD WPEF V I I S +EV+ M + +SV
Sbjct: 833 DVLLLGDDPWPEFVNSVWCIKILSLQEVQQMGKRGLELLNSV 874
>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
Length = 905
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 253/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + LP +++C++
Sbjct: 18 LNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQL 77
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q +P P + L Q + FCK LTASDTST
Sbjct: 78 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAE-LGTASNQPTNYFCKTLTASDTST 136
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD P QEL AKDLHG +W+F+HIFRGQP+RHLLTTGWS
Sbjct: 137 HGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTGWSV 196
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 FVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 256
Query: 260 TSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S +F+I + KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 257 TNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 316
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +WP S WRS+K+ WDE ++ RVS WEIEP + + P+ + A+ KRP
Sbjct: 317 ISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP-LTTFPMYPSPFALGLKRPW 375
Query: 376 SIDIPA 381
+P+
Sbjct: 376 PAGLPS 381
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKW 596
+N + + T KV G VGR +D+T YD+L E+ ++F ++GQL R W
Sbjct: 763 ENAEQANQQFATFVKVYKSG-TVGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGW 821
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISL 656
+VF D E D++L GDD W EF V I I S EEV+ M + SS
Sbjct: 822 QLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGC 881
Query: 657 DS 658
DS
Sbjct: 882 DS 883
>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
Length = 884
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/360 (52%), Positives = 248/360 (68%), Gaps = 18/360 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G R YFPQGH EQ+ ASTN+E+ Q P + LP++++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKEVNAQIPSYPSLPAQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P + Q + + LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQKAA---YLPADMGTPSKQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHLGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L KYL+AV++ SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRMMFETEESSVRRYMGTI 316
Query: 315 VGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP------FVASAPLNLAQP 367
G+ D +WP S+WRS+K+ WDE +R RVS WEIEP + + PL L +P
Sbjct: 317 TGISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPLTTFPTYPSPFPLRLKRP 376
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ T+N TRT KV G + GR++D+T Y++L EL +MF ++GQL R
Sbjct: 738 QSTENASQGNPPTRTFVKVYKSG-SFGRSLDITKFSSYNELRSELSRMFGLEGQLEDPLR 796
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GD WPEF V I I S +EV+ M
Sbjct: 797 SGWQLVFIDRENDVLLLGDGPWPEFVNSVWYIKILSPQEVQQMG 840
>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
Length = 748
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/395 (49%), Positives = 256/395 (64%), Gaps = 20/395 (5%)
Query: 4 VEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQ-LEASTNQ 62
+E + C + S+ G + LW ACAGPL +P+ G V YFPQGHIEQ L AS
Sbjct: 1 MEIDLNC-VESENGCCPSSICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLD 59
Query: 63 ELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITL-HPETDQTEPRSPDQCLPEPP 121
E Q P LP ++ CRV+++ L AE ETDEVYAQ+TL +TE ++ L E
Sbjct: 60 EQQVQIPSXHLPPQVFCRVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEE 119
Query: 122 -------KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLH 174
K T H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLH
Sbjct: 120 EGINLLHKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLH 179
Query: 175 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS 234
G EW+F+HI+RGQPRRHLLTTGWS FV + LV+GDA +FLRG++GELR+G+RR +H +S
Sbjct: 180 GIEWKFRHIYRGQPRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRS 239
Query: 235 SMPS-SVISSQ-SMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCF 290
+P+ SV+S Q L VL+ AA+A+ + ++F ++Y PR S+F+I KY+ ++
Sbjct: 240 IIPTHSVLSGQWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPV 299
Query: 291 SVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVS 349
VGMRFKMRFE ED+ ERR +G I G+GD +WP SKWR L ++WDE + RVS
Sbjct: 300 CVGMRFKMRFEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVS 359
Query: 350 PWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASAS 384
PWEIEP V LN+ P +K RP +P+ A+
Sbjct: 360 PWEIEPSVLPPALNV--PRLKKLRP---SLPSGAA 389
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKW 596
T++ S AS R+ TKV G AVGR++DL+ L GY DL ELE++F ++G L P W
Sbjct: 620 TEDNFLSNASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGW 679
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 639
VV+TD+E DM+L GDD W EFC +V KI I + ++V+NM+ S
Sbjct: 680 RVVYTDNENDMVLVGDDPWQEFCDVVCKILICTQDDVENMSPS 722
>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
Length = 396
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 255/366 (69%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 6 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQL 65
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q +P P + L KQ + FCK LTASDTST
Sbjct: 66 HNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAE-LGTASKQPTNYFCKTLTASDTST 124
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 125 HGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSV 184
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ ++ +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 185 FVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAS 244
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 245 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITG 304
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 305 ISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 363
Query: 376 SIDIPA 381
+P+
Sbjct: 364 PTGLPS 369
>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
Length = 478
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/368 (51%), Positives = 252/368 (68%), Gaps = 13/368 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P + Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQK---DAYLPAELGTPNKQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKR 375
Query: 374 PRSIDIPA 381
P +P+
Sbjct: 376 PWPPGLPS 383
>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 398
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 250/375 (66%), Gaps = 16/375 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL ++P V Y+PQGHIEQ+ A+ + + Q +LP+ +LC++ IE
Sbjct: 7 ELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAADVYQASKQ--FSNLPAHLLCKISKIE 64
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
L A+ TDEV+AQ+ L P+ + + P ++ V SFCK LTASDTSTHGGFSV
Sbjct: 65 LQADPHTDEVFAQMDLTPQYETEFTKEMKDAPPPTMQKNVRSFCKTLTASDTSTHGGFSV 124
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R+ A +CLP LD ++ P QEL AKDLHG EW F+HI+RG PRRHLLTTGWS FV+ KR
Sbjct: 125 PRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTGWSVFVSQKR 184
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFI 265
LVAGD +FLRGENG+LRVGVRR + Q S+ S+ ++HLGVLA A+HA F
Sbjct: 185 LVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAAASHAATERLRFS 244
Query: 266 VYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE- 322
V Y PRT S+F+I +KYL+ + +VG RFKM+FE ++S ERR++GTIV V D
Sbjct: 245 VIYNPRTSPSEFVIPYHKYLKTKENNLTVGSRFKMKFESDESTERRYSGTIVEVSDADPL 304
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV---KSKRPRSIDI 379
+WP S WRS+K++WDE A+ +R ERVSPWEIEPFV + L P+V +RP +
Sbjct: 305 KWPNSAWRSMKVEWDESAS-ERHERVSPWEIEPFVPIS--TLPTPSVGPRPKRRPPTFVT 361
Query: 380 PASASAFWYQGSTQS 394
+S QG++QS
Sbjct: 362 DSSP-----QGTSQS 371
>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 182/373 (48%), Positives = 243/373 (65%), Gaps = 31/373 (8%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ+ AS + + P +DL +I CRVV+
Sbjct: 51 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASFSPFTPLEIPTYDLQPQIFCRVVN 109
Query: 84 IELLAEQETDEVYAQITLHPETD------------------QTEPRSPDQCLPEPPKQTV 125
++LLA +E DEVY Q+TL P+ + + + RSP K T
Sbjct: 110 VQLLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPT-------KSTP 162
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLH EW+F+HI+R
Sbjct: 163 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYR 222
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQPRRHLLTTGWS FV+ K LV+GDA +FLRGENGELR+G+RR ++ +P SVI SQ+
Sbjct: 223 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQN 282
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGE 303
+ VL++ A+A+ T + F V+Y PR SQ F++ KY++++ + S+G RFKMRFE +
Sbjct: 283 CYPNVLSSVANAISTKSKFHVFYSPRASQADFVVPYQKYVKSIKNPVSIGTRFKMRFEMD 342
Query: 304 DSPERR-FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
+S ERR +G ++G D +WP SKWR L ++WDE +RVSPWEI+P P
Sbjct: 343 ESQERRCCSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDPSAPLPP 402
Query: 362 LNL-AQPAVKSKR 373
L++ + P +K R
Sbjct: 403 LSIQSSPRLKKLR 415
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-W 596
TQN Q SA R+ TKV QG VGRA+DL+ L GY+DL ELE++F ++G L+ DK W
Sbjct: 654 TQNLQNSAK--RSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDKGW 711
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+++TD E D+M+ GDD W EFC +V KI IY+ EEV+ M
Sbjct: 712 KILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKM 751
>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
Length = 837
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 190/393 (48%), Positives = 256/393 (65%), Gaps = 30/393 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW+ACAGP++ +PR G V YFPQGH+EQ A + H D+P + CRV+++
Sbjct: 33 ELWRACAGPVISLPRKGTIVVYFPQGHLEQ--APKFRAFAH-----DIPPHLFCRVLNVN 85
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ---------TVHSFCKILTASD 136
L AE TDEVYAQ++L PE + +S D+ ++ T H FCK LTASD
Sbjct: 86 LHAEIATDEVYAQVSLVPEP-EVGAKSLDEDGEGNGEEEEIEELSTATPHMFCKTLTASD 144
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A +C P LD P+QEL AKDLHG EW+F+HI+RGQPRRHLLTTG
Sbjct: 145 TSTHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTG 204
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS+FV K+LV+GDA +FLRGENGELR+G+RR A + +P S++ SQ+++L LA +
Sbjct: 205 WSSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALAAVST 264
Query: 257 AVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
AV T ++F VYY PR S +FII K+ ++++ S+G RFKMR+E ED+ E+R TG I
Sbjct: 265 AVSTKSMFHVYYNPRASPAEFIIPYRKFSKSINQPLSIGTRFKMRYETEDATEQRPTGLI 324
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA----SAPLNLAQPAV 369
G+GD +WPGSKWR L ++WDE A ++VSPWEIEP + S+PL
Sbjct: 325 TGIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEPSGSLSGFSSPLTPG---- 380
Query: 370 KSKRPRSIDIPASASAFWYQGSTQSHDITQVVG 402
SK+PR I +P+ + F ++ T D + +G
Sbjct: 381 -SKKPR-ISLPSIKADFPFRDGTGISDFGESLG 411
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 112/219 (51%), Gaps = 24/219 (10%)
Query: 450 SGRPGN----TVIHEEVERGKKSEASLG--CWLFGIDLKHNSNTAAPLGRKVVDPTTGTS 503
+ RPGN T+I + + ++S +LG C LFG L + A VDPT S
Sbjct: 620 TNRPGNSFDPTLISKSDFKDRQSGEALGTSCRLFGFPLTKEAPVA-----NTVDPTPVAS 674
Query: 504 GVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGR 563
++A D D + M + + + + + R+ TKV QG VGR
Sbjct: 675 ------QSAKDLDL---KTCLPTANSMIPGKQLHAEVQSSTKTAGRSCTKVHRQGNLVGR 725
Query: 564 AVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMV 622
A+DL+ L GYDDL ELE++F ++G L P W VV+TDDE DMML GDD W EFC +V
Sbjct: 726 AIDLSKLDGYDDLITELERLFNMEGLLNDPGKGWQVVYTDDEDDMMLVGDDPWQEFCNIV 785
Query: 623 KKIFIYSTEEVKNM---ATSSKPIASSVEGEGTAISLDS 658
KI IY+ +EV+ M TS + S E T S+ S
Sbjct: 786 SKILIYTHDEVELMVPGGTSDDAHSCSEEAPATVTSMSS 824
>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 546
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/481 (41%), Positives = 273/481 (56%), Gaps = 61/481 (12%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LW CAGPL +P+ GE+VYYFPQGHIE +E ST EL H P+FDLPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+ ++ TDEVYAQI+L P+T + + P V+ F KILTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTEVMTHNTTMDTRRP---IVYFFSKILTASDVSLSGG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT--GWSTF 200
+ +++A EC PPLDM+ TQ L AKDL+G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
T+KRL+ GD FV LRGENGELR G+RR HQQ +PSSVIS+ M GV+A+ +A KT
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 261 STLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+F V YKPR M+FEG+D E+R+ GTI+GV D
Sbjct: 259 KCMFNVVYKPR--------------------------MQFEGKDFSEKRYDGTIIGVNDM 292
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP--RSID 378
S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++Q ++K K+ + +
Sbjct: 293 SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKHWLQLNE 350
Query: 379 IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIV 438
I A+ S W Q +G S P+ E N+ +D + +
Sbjct: 351 IGATLSNLW---------TCQEIGQRSMNS-------PISVPEFSYP----NAIEDSKFL 390
Query: 439 AAQSVLSGYASSGRPGNTVIHEEVERGKK----SEASLGCWLFGIDLKHNSNTAAPLGRK 494
+ +L ++ P +++ + +K +EA+ C LFG+DL + R
Sbjct: 391 SG--LLLNHSLLAIPNENYNSDQMIQPRKEDITTEATTSCLLFGVDLTKVHMQGVAISRA 448
Query: 495 V 495
V
Sbjct: 449 V 449
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
TKV MQG+A+ RAVDLTA+ GY+ L +LE++F+++ +LR R++W +VFT++EG ML G
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVG 495
Query: 612 DDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
DD WPEFC M K+IFI S EE+K M +K
Sbjct: 496 DDPWPEFCNMAKRIFICSKEEIKKMKLKNK 525
>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
Length = 638
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/395 (49%), Positives = 256/395 (64%), Gaps = 20/395 (5%)
Query: 4 VEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQ-LEASTNQ 62
+E + C + S+ G + LW ACAGPL +P+ G V YFPQGHIEQ L AS
Sbjct: 1 MEIDLNC-VESENGCCPSSICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLD 59
Query: 63 ELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITL-HPETDQTEPRSPDQCLPEPP 121
E Q P LP ++ CRV+++ L AE ETDEVYAQ+TL +TE ++ L E
Sbjct: 60 EQQVQIPSXHLPPQVFCRVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEE 119
Query: 122 -------KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLH 174
K T H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLH
Sbjct: 120 EGINLLHKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLH 179
Query: 175 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS 234
G EW+F+HI+RGQPRRHLLTTGWS FV + LV+GDA +FLRG++GELR+G+RR +H +S
Sbjct: 180 GIEWKFRHIYRGQPRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRS 239
Query: 235 SMPS-SVISSQ-SMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCF 290
+P+ SV+S Q L VL+ AA+A+ + ++F ++Y PR S+F+I KY+ ++
Sbjct: 240 IIPTHSVLSGQWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPV 299
Query: 291 SVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVS 349
VGMRFKMRFE ED+ ERR +G I G+GD +WP SKWR L ++WDE + RVS
Sbjct: 300 CVGMRFKMRFEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVS 359
Query: 350 PWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASAS 384
PWEIEP V LN+ P +K RP +P+ A+
Sbjct: 360 PWEIEPSVLPPALNV--PRLKKLRP---SLPSGAA 389
>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 479
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/467 (41%), Positives = 270/467 (57%), Gaps = 61/467 (13%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LW CAGPL +P+ GE+VYYFPQGHIE +E ST EL H P+FDLPSK+ CRVV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+ ++ TDEVYAQI+L P+T + + P V+ F KILTASD S GG
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTTEVMTHNTTMDTRRP---IVYFFSKILTASDVSLSGG 138
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT--GWSTF 200
+ +++A EC PPLDM+ TQ L AKDL+G EW FKH+FRG P+RH+ T+ GWS F
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
T+KRL+ GD FV LRGENGELR G+RR HQQ +PSSVIS+ M GV+A+ +A KT
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258
Query: 261 STLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+F V YKPR M+FEG+D E+R+ GTI+GV D
Sbjct: 259 KCMFNVVYKPR--------------------------MQFEGKDFSEKRYDGTIIGVNDM 292
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP--RSID 378
S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++Q ++K K+ + +
Sbjct: 293 SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKHWLQLNE 350
Query: 379 IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIV 438
I A+ S W Q +G S P+ E N+ +D + +
Sbjct: 351 IGATLSNLW---------TCQEIGQRSMNS-------PISVPEFSYP----NAIEDSKFL 390
Query: 439 AAQSVLSGYASSGRPGNTVIHEEVERGKK----SEASLGCWLFGIDL 481
+ +L ++ P +++ + +K +EA+ C LFG+DL
Sbjct: 391 SG--LLLNHSLLAIPNENYNSDQMIQPRKEDITTEATTSCLLFGVDL 435
>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
Length = 713
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 239/367 (65%), Gaps = 18/367 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE-PLFDLPSKILCRV 81
+Y ELW ACAGPL +P+ G V YFPQGH+EQL +S+ +H++ P FDL +I C+V
Sbjct: 38 IYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQLASSS--PFSHRDMPNFDLHPQIFCKV 95
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----------PPKQTVHSFCK 130
V+++LLA +E DEVY ++TL P+ + + L E P K T H FCK
Sbjct: 96 VNVQLLANRENDEVYTRLTLLPQPEVVGQDLEGKELQELGVDGEGDDASPTKSTPHMFCK 155
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A +C P LD P+QEL AKDLHG EWRF+HI+RGQPRR
Sbjct: 156 TLTASDTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQPRR 215
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV+ K LV+GDA +FLRGE GELR+G+RR A ++ +P SV Q+
Sbjct: 216 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSLPSA 275
Query: 251 LATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
L+ ++A+ T ++F V Y PR + F++ KY++++ + +G RFKMRFE +DSPER
Sbjct: 276 LSLVSNAISTKSVFTVSYSPRATHAVFVVPYQKYIKSITNAVCIGTRFKMRFEMDDSPER 335
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQ 366
R +G + G D +WP SKWR L ++WDE ERVSPWEI+ V+ PL + +
Sbjct: 336 RCSGVVTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASVSLPPLIIQSS 395
Query: 367 PAVKSKR 373
P +K R
Sbjct: 396 PRLKKLR 402
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 547 STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEG 605
S R+ TKV QG VGRA+DL+ L GY DL +ELE++F ++G LR P + W +++TD E
Sbjct: 593 SKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLNELERLFSMEGLLRNPEEGWRILYTDSEN 652
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
D+M+ GDD W EFC + KI IY+ EEV+ M
Sbjct: 653 DVMVVGDDPWLEFCNVATKIHIYTQEEVEKM 683
>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 875
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 251/377 (66%), Gaps = 16/377 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQL-EASTNQELTHQEPLF-DLPSKILCR 80
L ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E P + +LPS+++C
Sbjct: 8 LNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSRLVCL 67
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPR---SPDQCLPEPPKQTVHSFCKILTASDT 137
+ ++ L A+ ETDEVYAQ+TL P E SPD + +Q FCK LTASDT
Sbjct: 68 LDNVTLHADLETDEVYAQMTLIPVLPANEKEALISPDIGMRS--RQPTEYFCKTLTASDT 125
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFS+ R+ A + PPLD T P QEL A+DLH EW F+HI+RGQPRRHLLTTGW
Sbjct: 126 STHGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTTGW 185
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRL AGDA +F+R + G+L++G+RR QQ+ MPSSV+SS SMH+GVLA A HA
Sbjct: 186 SVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAANHA 245
Query: 258 VKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
TS+ F ++Y PR S +F+I + KY +A+ SVGMRF+M FE E+S RR+ GTI
Sbjct: 246 AATSSRFTIFYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESSVRRYMGTI 305
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP--AVKS 371
G+GD +WP S WRSLK+ WDE +R RVS WEIEP + P L P A ++
Sbjct: 306 TGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPL--TTPFLLCPPPVAFRT 363
Query: 372 KRPR-SIDIPASASAFW 387
KRPR D + S+FW
Sbjct: 364 KRPRGGRDSTSKKSSFW 380
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 17/228 (7%)
Query: 445 SGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHN----SNTAA-------PLGR 493
SG P ++ + E + + S S LFG+ ++ SN A P +
Sbjct: 628 SGLTGMPVPASSFMFRESGQEQDSVQSDRHLLFGVSIEQQPLGASNPVASIHSQSYPKNK 687
Query: 494 KVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTK 553
V + +G + ++GS +++ D S + + GM ++ S A RT TK
Sbjct: 688 DVHNRFSGNNMLQGSYCSSTMPDISTMNGVGLDENGMC---QRGAPWATMSPAPVRTFTK 744
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDMMLAG 611
V G +VGR++D+ + Y +L EL ++F + L R W +VF D+E D +L G
Sbjct: 745 VHKLG-SVGRSIDVQKFQNYSELRAELARLFNLDNLLDDPQRTGWQLVFVDNENDTLLVG 803
Query: 612 DDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSE 659
DD W EF V+ I I S E++ M I ++V + +SE
Sbjct: 804 DDPWEEFVNYVRSIKILSPNEIQQMRQEQLEILNTVPMQQRPTCSNSE 851
>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
Aux/IAA_ARF_dimerisation [Medicago truncatula]
Length = 810
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/397 (46%), Positives = 253/397 (63%), Gaps = 17/397 (4%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ+ AS + + + P + L +ILCRVV+
Sbjct: 54 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASLSLFSSLEIPTYGLQPQILCRVVN 112
Query: 84 IELLAEQETDEVYAQITLHPET-------DQTEPR----SPDQCLPEPPKQTVHSFCKIL 132
++LLA +E DEVY Q+ L P+ D EP + P K H FCK L
Sbjct: 113 VQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG W+F+HI+RGQPRRHL
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHL 232
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV+ K LV+GDA +FLRGENGELR+G+RR A ++ +P S+I +QS L+
Sbjct: 233 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLS 292
Query: 253 TAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
+ A+A+ ++F V+Y PR S F++ KY +++ + ++G RFKM+FE ++SPERR
Sbjct: 293 SVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDESPERRC 352
Query: 311 -TGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
+G + G+ D +WP SKWR L ++WDE +RVSPWEI+P + PLN+ Q +
Sbjct: 353 SSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNI-QSS 411
Query: 369 VKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATE 405
+ K+ R+ S S F G + D + + +++
Sbjct: 412 RRLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSK 448
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 14/138 (10%)
Query: 511 AASDFDA----SQNQDLKEVKR-------GMADVSRKETQNKQGSAASTRTRTKVQMQGI 559
AA+ DA S +++ KE+ ++ + +QN Q SA R+ TKV QG
Sbjct: 635 AATSLDANIRISNDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAK--RSCTKVHKQGS 692
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGDDQWPEF 618
VGRA+DL+ L Y+DL ELE++F ++G LR DK W +++TD E D+M+ GDD W EF
Sbjct: 693 LVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEF 752
Query: 619 CKMVKKIFIYSTEEVKNM 636
C MV KI IY+ EEV+ M
Sbjct: 753 CDMVSKIHIYTQEEVEKM 770
>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 899
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 202/437 (46%), Positives = 277/437 (63%), Gaps = 25/437 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q E P + L P +Q + FCK LTASDTST
Sbjct: 80 HNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAE-LGTPSRQPTNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD ++ P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGDA +F+ E +L +G+RR + Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T + F +++ PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP------FVASAPLNLAQP-- 367
+ D +W S WRS+K+ WDE +R RVS WEIEP + + PL L +P
Sbjct: 319 ISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWP 378
Query: 368 -AVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTI 426
+ S + D+ ++ W +G I + G V P Q +D ++
Sbjct: 379 TGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAG-------VSPWMQPRLDPSM 431
Query: 427 INNNSTDDHRIVAAQSV 443
+ S D ++++A ++
Sbjct: 432 MGMQS-DMYQVMATAAL 447
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G R++D+T Y +L EL +MF ++G+L R W +VF D E D+
Sbjct: 767 TFVKVHKSG-TYSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDRENDV 825
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
+L GD WPEF V I I S EEV++M + +SV
Sbjct: 826 LLLGDGPWPEFVNSVWCIKILSPEEVQDMGKRGLELLNSV 865
>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 277/441 (62%), Gaps = 39/441 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + D LP P KQ + FCK LTASDT
Sbjct: 81 HNVTMHADVETDEVYAQMTLQPLTPQEQK---DTFLPVELGIPSKQPTNYFCKTLTASDT 137
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG-QPRRHLLTTG 196
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRG QP+RHLLTTG
Sbjct: 138 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPKRHLLTTG 197
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAH
Sbjct: 198 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAH 257
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GT
Sbjct: 258 AAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 317
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ K
Sbjct: 318 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLK 376
Query: 373 RPRSIDIPASASAFWYQGSTQSHD--------ITQVVGATEGQSSESQVVR-----PMRQ 419
RP W+ G++ HD + + G T Q +S + P Q
Sbjct: 377 RP------------WHPGASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQTVGMFPWTQ 424
Query: 420 KEIDSTIINNNSTDDHRIVAA 440
+ +D T + N+ ++ + A
Sbjct: 425 QRLDPTFLGNDHNQQYQAMLA 445
>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 891
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 200/439 (45%), Positives = 272/439 (61%), Gaps = 32/439 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL-----PEPPKQTVHSFCKILTASD 136
++ + A+ ETDEVYAQ+TL P + Q + + CL P KQ + FCK LTASD
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQK---EVCLLPAELGSPSKQPTNYFCKTLTASD 136
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A + PPLD T P QEL A+DLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 137 TSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTG 196
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRL+AGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAH
Sbjct: 197 WSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAH 256
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T++ F ++Y PR S+F+I L KY +AV+H SVGMRF+M FE E+S RR+ GT
Sbjct: 257 AAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 316
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ K
Sbjct: 317 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLK 375
Query: 373 RP-----------RSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKE 421
RP + D+ ++ W +G I + G + P Q
Sbjct: 376 RPWPSALPSFHAHKDGDMSINSPLMWLRGDIGDQGIQSLNFQGYG-------LTPWMQPR 428
Query: 422 IDSTIINNNSTDDHRIVAA 440
+D++++ S I AA
Sbjct: 429 LDASMLGLQSNMQQAIAAA 447
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ ++N + TRT KV G + GR++D+T YD+L EL +MF ++G+L R
Sbjct: 764 QSSENLEQVNPPTRTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLR 822
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GDD W EF V I I S EV+ M
Sbjct: 823 SGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMG 866
>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
Length = 816
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 257/397 (64%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 144
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 145 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGW 204
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 205 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHA 264
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 265 AATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 324
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 325 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 383
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 384 P------------WYSGVASLHDDSNALMWLRGVAGE 408
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 691 LQNAMYGCLDDSSGLLQNTGENDPATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 749
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 750 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 806
>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
Length = 818
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 257/397 (64%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 144
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 145 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGW 204
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 205 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHA 264
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 265 AATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 324
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 325 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 383
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 384 P------------WYSGVASLHDDSNALMWLRGVAGE 408
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 693 LQNAMYGCLDDSSGLLQNTGENDPATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 751
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 752 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 808
>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
Length = 818
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 257/397 (64%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 143
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 144 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGW 203
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 204 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHA 263
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 264 AATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 324 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 382
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 383 P------------WYSGVASLHDDSNALMWLRGVAGE 407
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 693 LQNAMYACLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 751
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 752 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 808
>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 277/441 (62%), Gaps = 32/441 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P + Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQK---DAYLPAELGVPSKQPSNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L KY +AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKR 375
Query: 374 PRSIDIPA-----------SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
P +P+ ++ W +G I + G V P Q +
Sbjct: 376 PWPPGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIG-------VNPWMQPRL 428
Query: 423 DSTIINNNSTDDHRIVAAQSV 443
D++++ TD ++ +AA ++
Sbjct: 429 DASMLGLQ-TDMYQAMAAAAL 448
>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
Length = 818
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 257/397 (64%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 143
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 144 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGW 203
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 204 SIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHA 263
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 264 AATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 324 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 382
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 383 P------------WYSGVASLHDDSNALMWLRGVAGE 407
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 693 LQNAMYACLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 751
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 752 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 808
>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
Length = 821
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 257/397 (64%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 143
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 144 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGW 203
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 204 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHA 263
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 264 AATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 324 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 382
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 383 P------------WYSGVASLHDDSNALMWLRGVAGE 407
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 696 LQNAMYGCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 754
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 755 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 811
>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
Length = 712
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 178/348 (51%), Positives = 228/348 (65%), Gaps = 20/348 (5%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
S + ELW ACAGPL+ +P+ G V Y PQGH+EQ+ +DLP + C
Sbjct: 35 SASVCLELWHACAGPLISLPKKGTVVVYLPQGHLEQVSDFPTSA-------YDLPPHLFC 87
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPR---------SPDQCLPEPPKQTVHSFCK 130
RVV ++L AE TD+V+AQ++L PE+++ E R + T H FCK
Sbjct: 88 RVVDVKLHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTPHMFCK 147
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A +C PPLD T P+QEL AKDLHG EWRF+HI+RGQPRR
Sbjct: 148 TLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRR 207
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV K+LV+GDA +FLRG++GELR+G+RR A +SS + SQ ++
Sbjct: 208 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLNYST 267
Query: 251 LATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
+ +AV T F VYY PR +S+FII K+L ++ HCFS GMRFKMRFE ED+ ER
Sbjct: 268 VTDVVNAVSTKNAFNVYYNPRASSSEFIIPSRKFLRSLDHCFSAGMRFKMRFETEDAAER 327
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
R+TG I G+G +WPGSKW+ L ++WD+ T + RVSPWEIEP
Sbjct: 328 RYTGLITGIGALDPIRWPGSKWKCLVVRWDDIDTSKH-GRVSPWEIEP 374
>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
Length = 795
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 257/397 (64%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 5 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 64
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 65 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 121
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 122 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGW 181
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 182 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHA 241
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 242 AATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 301
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 302 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 360
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 361 P------------WYSGVASLHDDSNALMWLRGVAGE 385
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 670 LQNAMYGCLDDSSGLLQNTGENDPATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 728
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 729 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 785
>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
Length = 819
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 195/397 (49%), Positives = 257/397 (64%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 27 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 86
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 87 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 143
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 144 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGW 203
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 204 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHA 263
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 264 AATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 323
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 324 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 382
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 383 P------------WYSGVASLHDDSNALMWLRGVAGE 407
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 694 LQNAMYGCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 752
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 753 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 809
>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 896
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/368 (51%), Positives = 251/368 (68%), Gaps = 12/368 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P + Q + LP P KQ + FCK LTASDT
Sbjct: 81 HNVTMHADAETDEVYAQMTLQPLSPQEQKEV--YLLPAELGTPSKQPTNYFCKTLTASDT 138
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 139 STHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 198
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 199 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHA 258
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 259 AATNSRFTIFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 318
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 319 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKR 377
Query: 374 PRSIDIPA 381
P +P+
Sbjct: 378 PWPSGLPS 385
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP----R 593
++N + T T KV G + GR++D++ YD+L EL +MF ++GQL R
Sbjct: 749 SENVDQANIPTGTFVKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQR 807
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTA 653
W +VF D E D++L GDD W EF V I I S EV+ M P ++S G+ +
Sbjct: 808 SGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKVLSP-STSAPGDKLS 866
Query: 654 ISLDS 658
++S
Sbjct: 867 TPVNS 871
>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
Length = 836
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/439 (45%), Positives = 272/439 (61%), Gaps = 32/439 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL-----PEPPKQTVHSFCKILTASD 136
++ + A+ ETDEVYAQ+TL P + Q + + CL P KQ + FCK LTASD
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLSPQEQK---EVCLLPAELGSPSKQPTNYFCKTLTASD 136
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A + PPLD T P QEL A+DLHG EW+F+HIFRGQP+RHLLTTG
Sbjct: 137 TSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTG 196
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRL+AGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAH
Sbjct: 197 WSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAH 256
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T++ F ++Y PR S+F+I L KY +AV+H SVGMRF+M FE E+S RR+ GT
Sbjct: 257 AAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGT 316
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ K
Sbjct: 317 ITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLK 375
Query: 373 RP-----------RSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKE 421
RP + D+ ++ W +G I + G + P Q
Sbjct: 376 RPWPSALPSFHAHKDGDMSINSPLMWLRGDIGDQGIQSLNFQGYG-------LTPWMQPR 428
Query: 422 IDSTIINNNSTDDHRIVAA 440
+D++++ S I AA
Sbjct: 429 LDASMLGLQSNMQQAIAAA 447
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ ++N + TRT KV G + GR++D+T YD+L EL +MF ++G+L R
Sbjct: 667 QSSENLEQVNPPTRTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLR 725
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GDD W EF V I I S EV+ M
Sbjct: 726 SGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMG 769
>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
Length = 801
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/381 (49%), Positives = 258/381 (67%), Gaps = 21/381 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P +G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+ L P T +Q + P + L P KQ + FCK LTASDTST
Sbjct: 80 HNVTMHADVETDEVYAQMVLQPLTQEEQKDTFVPIE-LGIPSKQPSNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLV GD+ +F+R E +L +G+R + Q+ +PSS++SS SMH+G+LA AAHA
Sbjct: 199 FVSAKRLVTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSMLSSDSMHIGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPR--TSQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F V+Y PR +S+F++ L KY++AV H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+GD S +WP S WRS+K+ WDE +R R S WEIEP + + P+ + ++ KRP
Sbjct: 319 IGDLDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEP-LTTFPMYPSLFPLRLKRP- 376
Query: 376 SIDIPASASAFWYQGSTQSHD 396
W+ G++ HD
Sbjct: 377 -----------WHPGASSMHD 386
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP- 592
S ++T A T+ KV G +VGR++D++ Y +L +EL KMF+I+G L
Sbjct: 679 SMQDTTELLHGAGQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFDIKGLLEDA 737
Query: 593 -RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
R W +VF D E D++L GDD W F V I I S E+V+ M
Sbjct: 738 FRSGWQLVFVDKEDDVLLLGDDPWESFVNSVWYIKILSPEDVQKMG 783
>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
Length = 740
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/343 (51%), Positives = 225/343 (65%), Gaps = 22/343 (6%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V YFPQGH+EQL + +DLP + CRVV ++
Sbjct: 49 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 101
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR-----------SPDQCLPEPPKQTVHSFCKILTA 134
L AE TDEVYAQ++L PET Q + + + T H FCK LTA
Sbjct: 102 LHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTA 161
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG+EWRF+HI+RGQPRRHLLT
Sbjct: 162 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLT 221
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS FV K+LV+GDA +FLRG +GELR+G+RR A + S P + SQ ++L L
Sbjct: 222 TGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAV 281
Query: 255 AHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
+A+ T ++F + Y PR +S+FII L K+ +++ H FS GMRFKMR E ED+ ERR+TG
Sbjct: 282 VNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTG 341
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
I G+ D +WPGSKWR L ++WD+ R RVSPWEIE
Sbjct: 342 LITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 383
>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/366 (49%), Positives = 241/366 (65%), Gaps = 17/366 (4%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL + + G V YFPQGH+EQ+ AS + + P +DL +I CRVV+
Sbjct: 52 YLELWHACAGPLTSLLKKGNVVVYFPQGHLEQV-ASFSPFTPLEIPTYDLQPQIFCRVVN 110
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----------PPKQTVHSFCKIL 132
++LLA +E DEVY Q+TL P+ + S + L E P K T H FCK L
Sbjct: 111 VQLLANKENDEVYTQVTLLPQPELEGMYSEGKELEELGAEEDGDERSPTKSTPHMFCKTL 170
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EW+F+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 230
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV+ K LV+GDA +FLRGENGELR+G+RR ++ +P SVI SQ+ + VL+
Sbjct: 231 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSNVLS 290
Query: 253 TAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
+ A+A+ T + F V+Y PR S F++ KY++++ + S+G RFKMRFE ++S ERR
Sbjct: 291 SVANAISTKSKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRC 350
Query: 311 T-GTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQP 367
+ GT++ D +W SKWR L ++WDE +RVSPWEI+P PL++ + P
Sbjct: 351 SSGTLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDPSAPLPPLSIQSSP 410
Query: 368 AVKSKR 373
+K R
Sbjct: 411 RLKKLR 416
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 87/157 (55%), Gaps = 22/157 (14%)
Query: 481 LKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQN 540
L+ N ++AA +G + + V+G A F G + QN
Sbjct: 616 LQDNISSAANMG------VSNDNNVQGKVNACKLF-------------GFSLSGETTAQN 656
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVV 599
Q SA R+ TKV QG VGRA+DL+ L GY+DL ELE++F ++G L+ DK W ++
Sbjct: 657 LQNSAK--RSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDKGWRIL 714
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+TD E D+M+ GDD W EFC +V KI IY+ EEV+ M
Sbjct: 715 YTDSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKM 751
>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
partial [Cucumis sativus]
Length = 884
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 189/366 (51%), Positives = 252/366 (68%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + LP +++C++
Sbjct: 5 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQL 64
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + Q E P + L P +Q + FCK LTASDTST
Sbjct: 65 HNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAE-LGTPSRQPTNYFCKTLTASDTST 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD ++ P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 124 HGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 183
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGDA +F+ E +L +G+RR + Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 184 FVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 243
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T + F +++ PR S+F+I L KY++AV+H SVGMRF+M FE +S RR+ GTI G
Sbjct: 244 TISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRYMGTITG 303
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 304 ISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 362
Query: 376 SIDIPA 381
+P+
Sbjct: 363 PTGLPS 368
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G R++D+T Y +L EL +MF ++G+L R W +VF D E D+
Sbjct: 752 TFVKVHKSG-TYSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDRENDV 810
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
+L GD WPEF V I I S EEV++M + +SV
Sbjct: 811 LLLGDGPWPEFVNSVWCIKILSPEEVQDMGKRGLELLNSV 850
>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/360 (52%), Positives = 247/360 (68%), Gaps = 18/360 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YF QGH EQ+ ASTN+E+ + P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P + Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQLTLQPLSPQEQK---DAYLPADLGTPSKQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRL+AGD+ +F+ E +L +G++R Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 197 SVFVSAKRLIAGDSVLFIWNEKNQLLLGIKRATRPQTVMPSSVLSSDSMHLGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+FII L KYL+AV++ SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFIIPLAKYLKAVYYTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP------FVASAPLNLAQP 367
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + ++ PL L +P
Sbjct: 317 TGISDLDVARWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSTFPLRLKRP 376
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVV 599
QG+ S RT KV G + GR++D+T Y++L EL MF ++GQL R W +V
Sbjct: 772 QGNPPS-RTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLV 829
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
F D E D++L GD WPEF V I I S +EV+ M + +SV
Sbjct: 830 FIDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGKRGLELLNSV 877
>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
Length = 914
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/368 (51%), Positives = 250/368 (67%), Gaps = 13/368 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNPQEQK---DAFLPADLGTSGKQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD T P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKR 375
Query: 374 PRSIDIPA 381
P +P+
Sbjct: 376 PWPPGLPS 383
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 496 VDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQ 555
+DP+ S AAS+F + D + GMA N+ G S ++
Sbjct: 731 IDPSAALS------YAASNFLGNTGTDF--LNPGMAG---SGCLNESGFLPSPENVGQIN 779
Query: 556 MQGI-------AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
Q + GR++++T Y +L EL +MF ++GQL R W +++ D + D
Sbjct: 780 PQNFVKVCKSGSFGRSLEITRFSSYLELRSELARMFGLEGQLEDPLRSGWQLIYIDRDND 839
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD WP+F K I I S +E++ M
Sbjct: 840 VLLLGDDPWPDFVKNASCIKILSPQELQQMG 870
>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
Length = 730
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/362 (50%), Positives = 231/362 (63%), Gaps = 19/362 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP+ +PR G V YFPQGH+EQL + CRVV +
Sbjct: 68 ELWHACAGPVAPMPRKGSVVVYFPQGHLEQLGGDAAAANAPVP------PHVFCRVVDVS 121
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRS-------PDQCLPEPPKQTV----HSFCKILTA 134
L A+ TDEVYAQ++L PE ++ R E KQ H FCK LTA
Sbjct: 122 LHADASTDEVYAQLSLLPENEEAVRRKREGAEEGSGGEDGETGKQRFSRMPHMFCKTLTA 181
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD + P+QELAAKDLHG EW+F+HI+RGQPRRHLLT
Sbjct: 182 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRGQPRRHLLT 241
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS FV K+LV+GDA +FLRG++GELR+GVRR A ++ + SQ +LG LA
Sbjct: 242 TGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQCSNLGTLANV 301
Query: 255 AHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
AHAV T +F +YY PR SQ FI+ K+ +++ FSVG+RFKMR+E ED+ ERR+TG
Sbjct: 302 AHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSLSQPFSVGLRFKMRYESEDAAERRYTG 361
Query: 313 TIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G GD W GSKW+ L ++WD+ +RP RVSPWEIE +++ +LA PA K
Sbjct: 362 IITGTGDADPMWRGSKWKCLLVRWDDDVECRRPNRVSPWEIELTSSASGSHLATPASKRL 421
Query: 373 RP 374
+P
Sbjct: 422 KP 423
>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
Length = 712
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/452 (42%), Positives = 263/452 (58%), Gaps = 21/452 (4%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
+G + ELW ACAGP+ +PR G V Y PQGH+E L + + C
Sbjct: 32 AGAVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVP----PHVFC 87
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQC------LPEPPKQTVHSFCKILT 133
RVV + LLA+ TDEVYAQ++L PE ++ R+ D + + + H FCK LT
Sbjct: 88 RVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLT 147
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLL 207
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV K+LV+GDA +FLRG++GELR+GVRR A ++ + +Q +LG LA
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267
Query: 254 AAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
AHAV T ++F +YY PR SQ FI+ K+++++ FSVG+RFKMR+E ED+ ERR+T
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASERRYT 327
Query: 312 GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKS 371
G I G GD W GSKW+ L ++WD+ A +RP RVSPWEIE + + +L+ P K
Sbjct: 328 GIITGSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTPHSKR 387
Query: 372 KRP------RSIDIPASASAFWYQGSTQSHDITQ---VVGATEGQSSESQVVRPMRQKEI 422
+P +P + S Q H + Q ++G + + +P + +
Sbjct: 388 LKPCLPHVNPEYMVPRGGGCPDFAESAQFHKVLQGQELLGFKSHGGTAAATSQPCEARHL 447
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPG 454
+ S+D + L A G PG
Sbjct: 448 QYIDERSCSSDASNSILGVPRLGDRAPLGNPG 479
>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 895
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 250/366 (68%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + LP +++C++
Sbjct: 20 LDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P +Q E P + L P KQ + FCK LTASDTST
Sbjct: 80 HNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAE-LGTPSKQPTNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S WRS+K+ WDE R RVS WEIEP + + P+ + ++ KRP
Sbjct: 319 ISDLDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 377
Query: 376 SIDIPA 381
+P+
Sbjct: 378 PPGLPS 383
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 476 LFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGM----A 531
LFG++++ +S P G + G +G +S++ + + + GM
Sbjct: 685 LFGVNIEPSS-LLMPNGMSSLKGVCGNNGSSTLPYQSSNYLNTTTRTDSSLNHGMTPNIG 743
Query: 532 DVSRKETQNKQGSAAS-TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
D + + G +T KV G + GR++D+T Y +L EL +MF ++G+L
Sbjct: 744 DSGFLQCLEEAGQGNPLNKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGEL 802
Query: 591 RP--RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 639
R W +VF D E D++L GD WPEF V I I S +EV+ M +
Sbjct: 803 EDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNN 853
>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/364 (54%), Positives = 249/364 (68%), Gaps = 13/364 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGHIEQ+ AST ++ P + LPSKI+C +
Sbjct: 6 LNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSKIICLL 65
Query: 82 VHIELLAEQETDEVYAQITLHPE--TDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+ L P +++ SPD L KQ FCK LTASDTST
Sbjct: 66 DNVTLHADPETDEVYAQMILLPIQISEKEALLSPD--LEVVNKQPTEYFCKTLTASDTST 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFS+ R+ A + PPLD T P QEL A+DLH EW F+HI+RGQPRRHLLTTGWS
Sbjct: 124 HGGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRHLLTTGWSV 183
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R + G L +G+RR QQ+ MPSSV+SS SMH GVLA A+HA
Sbjct: 184 FVSAKRLQAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFGVLAAASHAAA 243
Query: 260 TSTLFIVYYKPR--TSQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
TS+ F ++Y PR S+F+I L KY +A+++ F+VGMRF+M FE E+S RR+ GTI G
Sbjct: 244 TSSRFKIFYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESSVRRYVGTITG 303
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP--AVKSKR 373
+GD +WP S WRSLK+ WDE +R RVS WEIEP + P L P A++SKR
Sbjct: 304 LGDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPL--TTPFLLCPPPLALRSKR 361
Query: 374 PRSI 377
PR +
Sbjct: 362 PRGM 365
>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
Length = 843
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 201/440 (45%), Positives = 280/440 (63%), Gaps = 38/440 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L EL ACAGPLV +P G RV YFPQGH EQ+ A+TN+E+ P + +LP +++C++
Sbjct: 20 LNSELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P T Q + D LP P +Q + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLTRQEQK---DTYLPVELGIPSRQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ + +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F V++ PR S+F+I L+KY++AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+GD +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 317 TGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 375
Query: 374 PRSIDIPASASAFWYQGST--QSHDITQVVGAT----EG-------QSSESQVVRPMRQK 420
P WY G++ Q ++ + G EG + +S + P Q+
Sbjct: 376 P------------WYPGTSSFQENNSETINGMAWLRGEGGDQGPHLMNLQSFGMLPWMQQ 423
Query: 421 EIDSTIINNNSTDDHRIVAA 440
+D TI+ N+ ++ + A
Sbjct: 424 RVDPTILRNDLNQQYQAMLA 443
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 544 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFT 601
S +TRT KV G +VGR++D+T Y +L EL +MF I+G L R W +VF
Sbjct: 712 SLNATRTFVKVYKSG-SVGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFV 770
Query: 602 DDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D E D++L GDD W F V I I S E+V +
Sbjct: 771 DRENDVLLLGDDPWEAFVNNVWYIKILSPEDVLKLG 806
>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
Length = 791
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 240/366 (65%), Gaps = 17/366 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW ACAGPL +P+ G V YFPQGH+EQ +A + + P FDL +I CRVV
Sbjct: 57 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIFCRVV 115
Query: 83 HIELLAEQETDEVYAQITLHP-------ETDQTEPR----SPDQCLPEPPKQTVHSFCKI 131
H++LLA +ETDEVY Q+TL P T+ E + ++ + K+T H FCK
Sbjct: 116 HVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTPHMFCKT 175
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A +C PLD P+QEL AKDLHG EW+F+HI+RGQPRRH
Sbjct: 176 LTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 235
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV+ K L +GDA +FLR E GELR+G+RR A ++ +P S+I S +L
Sbjct: 236 LLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NIL 294
Query: 252 ATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
+ A+AV T ++F V+Y PR + +F+I KY+ ++ + +G RF+MRFE +DSPERR
Sbjct: 295 SLLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRNPICIGTRFRMRFEMDDSPERR 354
Query: 310 FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
G + GV D +WP SKWR L ++WDE ERVSPWEI+P ++ L++ Q +
Sbjct: 355 CAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSISLPHLSI-QSS 413
Query: 369 VKSKRP 374
+ KRP
Sbjct: 414 PRPKRP 419
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 512 ASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALK 571
SDFD + + K + ET ++S R TKV QG VGRA+DL+ L
Sbjct: 635 GSDFDMNASSGCKLFGFSLP----VETPASNPQSSSKRICTKVHKQGSQVGRAIDLSRLN 690
Query: 572 GYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYST 630
GYDDL ELE++F ++G LR P W +++TD E DMM+ GDD W +FC +V KI +Y+
Sbjct: 691 GYDDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTK 750
Query: 631 EEVKNMATSSK 641
EEV+N +K
Sbjct: 751 EEVENANDDNK 761
>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 777
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 247/412 (59%), Gaps = 72/412 (17%)
Query: 15 QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDL 73
+G G L+ ELWKACAGPL VP GE+VYY PQGHIEQ+EASTNQ Q PL++L
Sbjct: 15 RGCGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNL 74
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT--- 124
P KI C++++IEL E +TDEVYAQ+TL P+ Q E S P P
Sbjct: 75 PWKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGP 134
Query: 125 -VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHI 183
+HSFCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HI
Sbjct: 135 HIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHI 194
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISS 243
FRGQPRRHLL +GWS FV++KRLVAGDAF+FLR E V R
Sbjct: 195 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR--------------- 239
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGE 303
Y E++ +S+GMRFKMRFEGE
Sbjct: 240 --------------------------------------YYESLKRNYSIGMRFKMRFEGE 261
Query: 304 DSPERRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
++ E+RFTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +P
Sbjct: 262 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--SPC 319
Query: 363 NLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
++ V+ KR RS S +A ST + ++T V A Q+S ++ +
Sbjct: 320 HVNPLPVRFKRSRS-----SVNALPSDVSTVTREVTSKVMADSQQNSLTRAL 366
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWA 597
QNK S+ STR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P W
Sbjct: 640 QNKVQSS-STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWL 698
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
VV+TD+EGD+ML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 699 VVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERM 737
>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
Length = 907
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 249/366 (68%), Gaps = 8/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 24 LNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 83
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + DQ + L KQ + FCK LTASDTST
Sbjct: 84 HNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQPTNYFCKTLTASDTST 143
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 144 HGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 203
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 204 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAAHAAA 263
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 264 TNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 323
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 324 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSAFPMRLKRPW 382
Query: 376 SIDIPA 381
+P+
Sbjct: 383 PSGLPS 388
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ ++N STRT KV G + GR++D++ YD+L EL ++F ++G L R
Sbjct: 761 QSSENVDQVNPSTRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQR 819
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
W +VF D E D++L GDD W EF V I I S EV+ M A+SV
Sbjct: 820 SGWQLVFGDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKEGLSPAASV 873
>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
Length = 901
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/351 (52%), Positives = 241/351 (68%), Gaps = 10/351 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 37 LKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 96
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P +++ PD L K FC
Sbjct: 97 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLRGSKHPTEFFC 156
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD T PTQEL +DLH W F+HI+RGQP+
Sbjct: 157 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPK 216
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+G
Sbjct: 217 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 276
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC---FSVGMRFKMRFEGED 304
VLA AAHA T F+++Y PR ++F+I L KY +A+ C SVGMRF M FE ED
Sbjct: 277 VLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAI--CGSQLSVGMRFGMMFETED 334
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
S +RR+ GTIVG+ D +WPGSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 335 SGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 385
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 539 QNKQGS-----AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RP 592
QN +GS RT TKVQ G +VGR++D+T+ + Y++L +E MF ++G L +P
Sbjct: 777 QNSKGSWQKLATPRVRTYTKVQKTG-SVGRSIDVTSFRDYEELKSAIECMFGLEGLLTQP 835
Query: 593 RDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ W +V+ D E D++L GDD W EF V+ I I S EV+ M+
Sbjct: 836 QSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 881
>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 176/342 (51%), Positives = 226/342 (66%), Gaps = 21/342 (6%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V YFPQGH+EQL + +DLP + CRVV ++
Sbjct: 46 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 98
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----------TVHSFCKILTAS 135
L AE TDEVYAQ++L PET + + + ++ T H FCK LTAS
Sbjct: 99 LHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTAS 158
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG+EWRF+HI+RGQPRRHLLTT
Sbjct: 159 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTT 218
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV K+LV+GDA +FLRG +GELR+G+RR A + S P + SQ ++L L
Sbjct: 219 GWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVV 278
Query: 256 HAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
+A+ T ++F + Y PR +S+FII L K+ +++ H FS GMRFKMR E ED+ ERR+TG
Sbjct: 279 NAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGL 338
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
I G+ D +WPGSKWR L ++WD+ R RVSPWEIE
Sbjct: 339 ITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 379
>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 866
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 187/368 (50%), Positives = 251/368 (68%), Gaps = 12/368 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P + Q + LP P KQ + FCK LTASDT
Sbjct: 81 HNVTMHADAETDEVYAQMTLQPLSPQEQKEV--YLLPAELGTPGKQPTNYFCKTLTASDT 138
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 139 STHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGW 198
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 199 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHA 258
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S R+ GTI
Sbjct: 259 AATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVPRYMGTI 318
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ +R
Sbjct: 319 TGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLRR 377
Query: 374 PRSIDIPA 381
P +P+
Sbjct: 378 PWPSGLPS 385
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR---- 591
+ ++N + T T KV G + GR++D++ YD+L EL +MF ++GQL
Sbjct: 747 QSSENVDQANTPTGTFVKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKT 805
Query: 592 PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASS 646
R W +VF D E D++L GDD W EF V I I S EV+ M P S+
Sbjct: 806 QRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKGLSPSTSA 860
>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 775
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 245/408 (60%), Gaps = 72/408 (17%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKI 77
G L+ ELWKACAGPL VP GE+VYY PQGHIEQ+EASTNQ Q PL++LP KI
Sbjct: 17 GKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKI 76
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT----VHS 127
C++++IEL E +TDEVYAQ+TL P+ Q E S P P +HS
Sbjct: 77 PCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHS 136
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQ
Sbjct: 137 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQ 196
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV++KRLVAGDAF+FLR E V R
Sbjct: 197 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR------------------- 237
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
Y E++ +S+GMRFKMRFEGE++ E
Sbjct: 238 ----------------------------------YYESLKRNYSIGMRFKMRFEGEEAAE 263
Query: 308 RRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
+RFTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +P ++
Sbjct: 264 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--SPCHVNP 321
Query: 367 PAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
V+ KR RS S +A ST + ++T V A Q+S ++ +
Sbjct: 322 LPVRFKRSRS-----SVNALPSDVSTVTREVTSKVMADSQQNSLTRAL 364
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWA 597
QNK S+ STR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P W
Sbjct: 638 QNKVQSS-STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWL 696
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
VV+TD+EGD+ML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 697 VVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERM 735
>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/399 (44%), Positives = 252/399 (63%), Gaps = 47/399 (11%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
+ +V+P F + G + LY +LWK CAGPL + P+ GE +L S
Sbjct: 6 IMHVQPEFLAT-----GGTNNYLYDQLWKLCAGPLFDPPKIGE-----------ELVTSI 49
Query: 61 NQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE-PRSPDQCLPE 119
N EL +P+F++PSKI C V I+L E TDE+YA+I+L P+T + E P S +C E
Sbjct: 50 NDELCQLKPVFNIPSKIRCNVFSIKLKVETTTDEIYAEISLLPDTSEVEIPTS--KC--E 105
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
Q + F K+L+ASDTS GGF + ++HA ECLPPLDM+ TP+QE+ A D+HG+EW+
Sbjct: 106 NNIQNIKCFTKVLSASDTSKKGGFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWK 165
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLA-HQQSSMPS 238
FKH +G P+RHL T+GW+ F +K+LV GD+F+FLRGENGE RVG+++ A HQQ ++PS
Sbjct: 166 FKHALKGTPKRHLFTSGWNEFAKAKKLVVGDSFIFLRGENGESRVGIKKAAHHQQENIPS 225
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKM 298
S+IS +SMH GV+ATA +A+K +F+V+YKPR+SQF++ ++K+ + V+ FS+G RF M
Sbjct: 226 SIISKESMHHGVVATALNAIKNKCMFVVFYKPRSSQFVVNIDKFRDGVNKKFSIGSRFLM 285
Query: 299 RFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
+FEG+D E F W S+WR L++QWDE AT+ RP++VSPWEIEP
Sbjct: 286 KFEGKDFNEIS--------ERFLPHWKDSEWRCLEVQWDEAATIPRPDKVSPWEIEPLTH 337
Query: 359 SAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDI 397
S+ DI S S W TQ ++
Sbjct: 338 SS-----------------DILKSGSNMWVPTLTQGQEV 359
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
TR+ TKV+M+G A+ R VDL+ GY+ L DELE++F+I+G+L ++W +VF + +GD+
Sbjct: 443 TRSHTKVRMEG-AMERTVDLSIFDGYNQLIDELERLFDIKGKLHIHNQWKIVFINADGDI 501
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVK 634
ML GDD WP+FC ++IFI S + K
Sbjct: 502 MLLGDDPWPKFCNTAEEIFICSKNDAK 528
>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 652
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 245/408 (60%), Gaps = 72/408 (17%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKI 77
G L+ ELWKACAGPL VP GE+VYY PQGHIEQ+EASTNQ Q PL++LP KI
Sbjct: 17 GKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKI 76
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT----VHS 127
C++++IEL E +TDEVYAQ+TL P+ Q E S P P +HS
Sbjct: 77 PCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHS 136
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQ
Sbjct: 137 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQ 196
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV++KRLVAGDAF+FLR E V R
Sbjct: 197 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR------------------- 237
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
Y E++ +S+GMRFKMRFEGE++ E
Sbjct: 238 ----------------------------------YYESLKRNYSIGMRFKMRFEGEEAAE 263
Query: 308 RRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
+RFTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +P ++
Sbjct: 264 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--SPCHVNP 321
Query: 367 PAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
V+ KR RS S +A ST + ++T V A Q+S ++ +
Sbjct: 322 LPVRFKRSRS-----SVNALPSDVSTVTREVTSKVMADSQQNSLTRAL 364
>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
Length = 930
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 181/344 (52%), Positives = 240/344 (69%), Gaps = 7/344 (2%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPS 75
G G + ELW ACAGPLV +P+ G VYYFPQGH EQ+ STN+ T Q P + +L S
Sbjct: 35 GGGRKLISSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLAS 94
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLPEPPKQTVHSFCKILTA 134
++LC+V ++ L A++ETDE+YAQ++L P + + PD L +P K FCK LTA
Sbjct: 95 QLLCQVHNVTLHADKETDEIYAQMSLQPVNSEKDVFPIPDFGL-KPNKHPTEFFCKTLTA 153
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A + PPLD ++ PTQEL +DLH W F+HI+RGQP+RHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 213
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS FV +KRL AGD+ +F+R E +L +GVRR QQ+S+PSSV+S+ SMH+GVLA A
Sbjct: 214 TGWSMFVGAKRLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAA 273
Query: 255 AHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFT 311
AHA + F ++Y PR S+F+I L K+ ++V++ SVGMRF M FE E+S +RR+
Sbjct: 274 AHAAANRSTFTIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRRYM 333
Query: 312 GTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
GTI G+ D +WPGSKWR L+++WDEP + RVSPWE+E
Sbjct: 334 GTISGISDLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVE 377
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR--DKWAVV 599
Q A RT TK+Q G +VGR++D++ K Y++L E+E+MF ++G L W +V
Sbjct: 810 QQVAPRVRTYTKIQKTG-SVGRSIDVSGFKNYEELRSEIERMFGLEGLLNDTRGSSWKLV 868
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ D E D++L GDD W EF V+ I I S EV+ M
Sbjct: 869 YVDFENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMG 906
>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 817
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/397 (48%), Positives = 254/397 (63%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 142
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 143 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGW 202
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+R Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 203 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHA 262
Query: 258 VKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S +F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 263 AATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 322
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 323 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 381
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 382 P------------WYSGLAALHDDSNALMWLRGVTGE 406
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 692 LQSPMYGCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 750
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 751 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 807
>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 661
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/408 (48%), Positives = 245/408 (60%), Gaps = 72/408 (17%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKI 77
G L+ ELWKACAGPL VP GE+VYY PQGHIEQ+EASTNQ Q PL++LP KI
Sbjct: 17 GKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKI 76
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT----VHS 127
C++++IEL E +TDEVYAQ+TL P+ Q E S P P +HS
Sbjct: 77 PCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHS 136
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQ
Sbjct: 137 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQ 196
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV++KRLVAGDAF+FLR E V R
Sbjct: 197 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR------------------- 237
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
Y E++ +S+GMRFKMRFEGE++ E
Sbjct: 238 ----------------------------------YYESLKRNYSIGMRFKMRFEGEEAAE 263
Query: 308 RRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
+RFTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +P ++
Sbjct: 264 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--SPCHVNP 321
Query: 367 PAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVV 414
V+ KR RS S +A ST + ++T V A Q+S ++ +
Sbjct: 322 LPVRFKRSRS-----SVNALPSDVSTVTREVTSKVMADSQQNSLTRAL 364
>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
Length = 780
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/434 (45%), Positives = 275/434 (63%), Gaps = 30/434 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P +G RV YFPQGH EQ+ A+TN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPTLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+ L P T +Q + P + L P KQ + FCK LTASDTST
Sbjct: 80 HNVTMHADLETDEVYAQMVLQPLTQEEQKDTFVPIE-LGVPSKQPSNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD T P QEL AKDLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLV GD+ +F+R E +L +G+R Q+ +PSS++SS SMH+G+LA AAHA
Sbjct: 199 FVSAKRLVTGDSVIFIRNERNQLLLGIRHATRPQTIVPSSMLSSDSMHIGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPR--TSQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F V+Y PR +S+F++ L KY++AV H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+GD S WP S WRS+K+ WDE +R R S WEIEP + + P+ + ++ KRP
Sbjct: 319 IGDLDSVLWPNSHWRSVKVGWDESTAGERQARASLWEIEP-LTTFPMYPSLFPLRLKRP- 376
Query: 376 SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQV---------VRPMRQKEIDSTI 426
W+ G++ D + G + E+ + V P Q+ +D ++
Sbjct: 377 -----------WHPGASSFQDSRGDLTWLRGGAGENGLLPLNYPSPNVFPWMQQRLDLSL 425
Query: 427 INNNSTDDHRIVAA 440
+ + ++ + A
Sbjct: 426 LGTDQNQQYQAMLA 439
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVV 599
G T KV G +VGR++D++ Y++L +EL +MF+I+G L R W +V
Sbjct: 669 HGGVEHTNNFVKVYKSG-SVGRSLDISRFSSYNELREELGRMFDIKGLLEDAFRSGWQLV 727
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
F D E D++L GDD W F V I I S ++V M
Sbjct: 728 FVDKEDDILLLGDDPWESFVNSVWYIKILSPDDVHKMG 765
>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
Length = 719
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/452 (42%), Positives = 262/452 (57%), Gaps = 21/452 (4%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
+G + ELW ACAGP+ +PR G V Y PQGH+E L + + C
Sbjct: 32 AGAVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVP----PHVFC 87
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQC------LPEPPKQTVHSFCKILT 133
RVV + LLA+ TDEVYAQ++L PE ++ R+ D + + + H FCK LT
Sbjct: 88 RVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLT 147
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLH EWRF+HI+RGQPRRHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLL 207
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV K+LV+GDA +FLRG++GELR+GVRR A ++ + +Q +LG LA
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267
Query: 254 AAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
AHAV T ++F +YY PR SQ FI+ K+++++ FSVG+RFKMR+E ED+ ERR+T
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYT 327
Query: 312 GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKS 371
G I G GD W GSKW+ L ++WD+ A +RP RVSPWEIE + + +L+ P K
Sbjct: 328 GIITGSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTPHSKR 387
Query: 372 KRP------RSIDIPASASAFWYQGSTQSHDITQ---VVGATEGQSSESQVVRPMRQKEI 422
+P +P + S Q H + Q ++G + + +P + +
Sbjct: 388 LKPCLPHVNPEYMVPRGGGCPDFAESAQFHKVLQGQELLGFKSHGGTAAATSQPCEARHL 447
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPG 454
+ S+D + L A G PG
Sbjct: 448 QYIDERSCSSDASNSILGVPRLGDRAPLGNPG 479
>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 786
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/397 (48%), Positives = 254/397 (63%), Gaps = 25/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 142
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGW
Sbjct: 143 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGW 202
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+R Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 203 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHA 262
Query: 258 VKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S +F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 263 AATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 322
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 323 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 381
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 382 P------------WYSGLAALHDDSNALMWLRGVTGE 406
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 692 LQSPMYGCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 750
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQW 615
MF I+GQL D+ W +VF D E D++L GDD W
Sbjct: 751 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPW 785
>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
protein 1; AltName: Full=OsETTIN1
gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
Length = 712
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/452 (42%), Positives = 262/452 (57%), Gaps = 21/452 (4%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
+G + ELW ACAGP+ +PR G V Y PQGH+E L + + C
Sbjct: 32 AGAVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVP----PHVFC 87
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQC------LPEPPKQTVHSFCKILT 133
RVV + LLA+ TDEVYAQ++L PE ++ R+ D + + + H FCK LT
Sbjct: 88 RVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLT 147
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLH EWRF+HI+RGQPRRHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLL 207
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV K+LV+GDA +FLRG++GELR+GVRR A ++ + +Q +LG LA
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267
Query: 254 AAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
AHAV T ++F +YY PR SQ FI+ K+++++ FSVG+RFKMR+E ED+ ERR+T
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYT 327
Query: 312 GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKS 371
G I G GD W GSKW+ L ++WD+ A +RP RVSPWEIE + + +L+ P K
Sbjct: 328 GIITGSGDTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTPHSKR 387
Query: 372 KRP------RSIDIPASASAFWYQGSTQSHDITQ---VVGATEGQSSESQVVRPMRQKEI 422
+P +P + S Q H + Q ++G + + +P + +
Sbjct: 388 LKPCLPHVNPEYMVPRGGGCPDFAESAQFHKVLQGQELLGFKSHGGTAAATSQPCEARHL 447
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPG 454
+ S+D + L A G PG
Sbjct: 448 QYIDERSCSSDASNSILGVPRLGDRAPLGNPG 479
>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
Length = 739
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/392 (45%), Positives = 237/392 (60%), Gaps = 18/392 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP+ +PR G V Y PQGH+E L + LP + CRVV +
Sbjct: 56 ELWHACAGPVAPLPRKGTVVVYLPQGHLEHLGDAAAAAAGGAPAPAALPPHVFCRVVDVT 115
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR-------------SPDQCLPEPPKQTVHSFCKIL 132
L A+ TDEVYAQ+ L E + R + + + + H FCK L
Sbjct: 116 LHADASTDEVYAQLALVAENEDVARRLRGGSEDGSAGDGDDGEAVKQRFSRMPHMFCKTL 175
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EWRF+HI+RGQPRRHL
Sbjct: 176 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 235
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV K+LV+GDA +FLRG++GELR+GVRR A ++ + +Q +LG LA
Sbjct: 236 LTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLA 295
Query: 253 TAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
AHAV T ++F +YY PR SQ FII +K++++ FS G+RFKMR+E +D+ ERR
Sbjct: 296 NVAHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKSFSQQFSAGLRFKMRYESDDASERRC 355
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
TG I G+GD W GSKW+ L ++WD+ +RP R+SPWEIE + + +L+ P K
Sbjct: 356 TGVIAGIGDADPMWRGSKWKCLMVRWDDDVDFRRPNRISPWEIELTSSVSGSHLSAPNAK 415
Query: 371 SKR---PRSIDIPASASAFWYQGSTQSHDITQ 399
+ P +P + + S Q H + Q
Sbjct: 416 RLKPCLPPDYLVPNGSGCPDFAESAQFHKVLQ 447
>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
Full=Auxin-responsive protein IAA24; AltName:
Full=Transcription factor MONOPTEROS
gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
Length = 902
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 241/351 (68%), Gaps = 10/351 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 40 LKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 99
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P +++ PD + K FC
Sbjct: 100 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFC 159
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD + PTQEL +DLH W F+HI+RGQP+
Sbjct: 160 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPK 219
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+G
Sbjct: 220 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 279
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC---FSVGMRFKMRFEGED 304
VLA AAHA T F+++Y PR ++F+I L KY +A+ C SVGMRF M FE ED
Sbjct: 280 VLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAI--CGSQLSVGMRFGMMFETED 337
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
S +RR+ GTIVG+ D +WPGSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 338 SGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 26/144 (18%)
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSA------ASTRTRTKVQ 555
SG G++ + DFD D S + QN +GS+ RT TKVQ
Sbjct: 757 NSGGTGTSSSNVDFD---------------DCSLR--QNSKGSSWQKIATPRVRTYTKVQ 799
Query: 556 MQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDK-WAVVFTDDEGDMMLAGDD 613
G +VGR++D+T+ K Y++L +E MF ++G L P+ W +V+ D E D++L GDD
Sbjct: 800 KTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDD 858
Query: 614 QWPEFCKMVKKIFIYSTEEVKNMA 637
W EF V+ I I S EV+ M+
Sbjct: 859 PWEEFVGCVRCIRILSPTEVQQMS 882
>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
Length = 809
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/395 (48%), Positives = 257/395 (65%), Gaps = 21/395 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 21 LNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+ + A+ ETDEVYAQ+TL P +Q +P P + + KQ + FCK LTASDTST
Sbjct: 81 HDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAE-MGIMSKQPTNYFCKTLTASDTST 139
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 140 HGGFSVPRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSV 199
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 200 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 259
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F +++ PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 260 TNSRFTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITE 319
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K P
Sbjct: 320 VSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKHP- 377
Query: 376 SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
WY G HD + + G + E
Sbjct: 378 -----------WYSGVAALHDDSNALMWLRGVAGE 401
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 684 LQSPMYGCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 742
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 743 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 799
>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
Length = 902
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 241/351 (68%), Gaps = 10/351 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 40 LKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 99
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P +++ PD + K FC
Sbjct: 100 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFC 159
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD + PTQEL +DLH W F+HI+RGQP+
Sbjct: 160 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPK 219
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+G
Sbjct: 220 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 279
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC---FSVGMRFKMRFEGED 304
VLA AAHA T F+++Y PR ++F+I L KY +A+ C SVGMRF M FE ED
Sbjct: 280 VLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAI--CGSQLSVGMRFGMMFETED 337
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
S +RR+ GTIVG+ D +WPGSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 338 SGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 24/143 (16%)
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSA----ASTRTRTKVQMQ 557
SG G++ + DFD D S + QN +GS+ A+ R RT +++Q
Sbjct: 757 NSGGTGTSSSNVDFD---------------DCSLR--QNSKGSSWQKIATPRVRTYIKVQ 799
Query: 558 GI-AVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDK-WAVVFTDDEGDMMLAGDDQ 614
+VGR++D+T+ K Y++L +E MF ++G L P+ W +V+ D E D++L GDD
Sbjct: 800 KTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDDP 859
Query: 615 WPEFCKMVKKIFIYSTEEVKNMA 637
W EF V+ I I S EV+ M+
Sbjct: 860 WEEFVGCVRCIRILSPTEVQQMS 882
>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 709
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/378 (48%), Positives = 243/378 (64%), Gaps = 29/378 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL---FDLPSKILCRVV 82
ELW ACAGPL+ +P+ G V YFPQGH+EQ H PL ++PS + CRV+
Sbjct: 28 ELWHACAGPLISLPKKGSVVVYFPQGHLEQH--------LHDFPLPASANIPSHVFCRVL 79
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----------TVHSFCKIL 132
++L AE+ +DEV+ Q+ L PET+Q + + ++ T H FCK L
Sbjct: 80 DVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVMKSTTPHMFCKTL 139
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EWRF+HI+RGQPRRHL
Sbjct: 140 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHL 199
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV K+LV+GDA +FLRGE+GELR+G+RR A +S S +S Q + L
Sbjct: 200 LTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQLSPTSLM 259
Query: 253 TAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
+A+ F ++Y PR TS+FII ++++L+++ + +S GMRF+MRFE ED+ ERRF
Sbjct: 260 DVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYSYSAGMRFRMRFETEDAAERRF 319
Query: 311 TGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF-VASAPLNLAQPA 368
TG IVG+ D +WPGSKWR L ++WD+ V R RVSPWEIEP AS NL
Sbjct: 320 TGLIVGIADVDPVRWPGSKWRCLMVRWDD-LEVTRHNRVSPWEIEPSGSASTANNLMSAG 378
Query: 369 VKSKRPRSIDIPASASAF 386
+K + I +P++ F
Sbjct: 379 LKRTK---IGLPSAKLEF 393
>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 251/366 (68%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P +Q +P P + L P +Q + FCK LTASDTST
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAE-LGVPSRQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ + +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 201 FVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 317 VGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 321 ICDLDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 379
Query: 376 SIDIPA 381
+P+
Sbjct: 380 PPGLPS 385
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDK 595
T+N Q + T KV G + GR++D++ Y +L EL +MF ++GQL R
Sbjct: 746 TENPQ-----SNTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSG 799
Query: 596 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GDD WPEF V I I S +EV+ M
Sbjct: 800 WQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMG 841
>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
Length = 890
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 241/351 (68%), Gaps = 10/351 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 28 LKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 87
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P +++ PD + K FC
Sbjct: 88 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFC 147
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD + PTQEL +DLH W F+HI+RGQP+
Sbjct: 148 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPK 207
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+G
Sbjct: 208 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 267
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC---FSVGMRFKMRFEGED 304
VLA AAHA T F+++Y PR ++F+I L KY +A+ C SVGMRF M FE ED
Sbjct: 268 VLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAI--CGSQLSVGMRFGMMFETED 325
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
S +RR+ GTIVG+ D +WPGSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 326 SGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 26/144 (18%)
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSA------ASTRTRTKVQ 555
SG G++ + DFD D S + QN +GS+ RT TKVQ
Sbjct: 745 NSGGTGTSSSNVDFD---------------DCSLR--QNSKGSSWQKIATPRVRTYTKVQ 787
Query: 556 MQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDK-WAVVFTDDEGDMMLAGDD 613
G +VGR++D+T+ K Y++L +E MF ++G L P+ W +V+ D E D++L GDD
Sbjct: 788 KTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDD 846
Query: 614 QWPEFCKMVKKIFIYSTEEVKNMA 637
W EF V+ I I S EV+ M+
Sbjct: 847 PWEEFVGCVRCIRILSPTEVQQMS 870
>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 935
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 251/366 (68%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P +Q +P P + L P +Q + FCK LTASDTST
Sbjct: 82 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAE-LGVPSRQPTNYFCKTLTASDTST 140
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 141 HGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 200
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ + +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 201 FVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 260
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 261 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 320
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 321 ICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 379
Query: 376 SIDIPA 381
+P+
Sbjct: 380 PPGLPS 385
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ ++N + T KV G + GR++D++ Y +L EL +MF ++GQL R
Sbjct: 783 QSSENLGSENPQSNTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVR 841
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GDD WPEF V I I S +EV+ M
Sbjct: 842 SGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMG 885
>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 933
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 251/366 (68%), Gaps = 9/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + L +++C++
Sbjct: 20 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P +Q +P P + L P +Q + FCK LTASDTST
Sbjct: 80 HNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAE-LGVPSRQPTNYFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ + +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA
Sbjct: 199 FVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 259 TNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 318
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 319 ICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPW 377
Query: 376 SIDIPA 381
+P+
Sbjct: 378 PPGLPS 383
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ ++N + T KV G + GR++D++ Y +L EL +MF ++GQL R
Sbjct: 781 QSSENLGSENPQSNTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVR 839
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GDD WPEF V I I S +EV+ M
Sbjct: 840 SGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMG 883
>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
Length = 850
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 241/351 (68%), Gaps = 10/351 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 29 LKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 88
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P +++ PD + K FC
Sbjct: 89 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFC 148
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD + PTQEL +DLH W F+HI+RGQP+
Sbjct: 149 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPK 208
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+G
Sbjct: 209 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 268
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC---FSVGMRFKMRFEGED 304
VLA AAHA T F+++Y PR ++F+I L KY +A+ C SVGMRF M FE ED
Sbjct: 269 VLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAI--CGSQLSVGMRFGMMFETED 326
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
S +RR+ GTIVG+ D +WPGSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 327 SGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 377
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 26/122 (21%)
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSA------ASTRTRTKVQ 555
SG G++ + DFD D S + QN +GS+ RT TKVQ
Sbjct: 746 NSGGTGTSSSNVDFD---------------DCSLR--QNSKGSSWQKIATPRVRTYTKVQ 788
Query: 556 MQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDK-WAVVFTDDEGDMMLAGDD 613
G +VGR++D+T+ K Y++L +E MF ++G L P+ W +V+ D E D++L GDD
Sbjct: 789 KTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDVLLVGDD 847
Query: 614 QW 615
W
Sbjct: 848 PW 849
>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 788
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 181/370 (48%), Positives = 239/370 (64%), Gaps = 25/370 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW ACAGPL +P+ G V YFPQGH+EQ +A + + P FDL +I+CRVV
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKFDLNPQIVCRVV 120
Query: 83 HIELLAEQETDEVYAQITLHP---------------ETDQTEPRSPDQCLPEPPKQTVHS 127
+++LLA ++TDEVY Q+TL P E E R+ + K+T H
Sbjct: 121 NVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSV----KRTPHM 176
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSV R+ A +C PLD P+QEL AKDLHG EW+F+HI+RGQ
Sbjct: 177 FCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQ 236
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLLTTGWS FV+ K LV+GDA +FLR E GELR+G+RR A ++ +P S+I S
Sbjct: 237 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS 296
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
+L+ A+AV T ++F V+Y PR + +F+I KY+ ++ +G RF+MRFE +DS
Sbjct: 297 -NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDS 355
Query: 306 PERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
PERR G + GV D +WP SKWR L ++WDE ERVSPWEI+P V+ L++
Sbjct: 356 PERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSI 415
Query: 365 AQPAVKSKRP 374
Q + + KRP
Sbjct: 416 -QSSPRPKRP 424
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 537 ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK 595
ET + ++S R TKV QG VGRA+DL+ L GYDDL ELE++F ++G LR P
Sbjct: 653 ETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKG 712
Query: 596 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
W +++TD E DMM+ GDD W +FC +V KI +Y+ EEV+N +K
Sbjct: 713 WRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 758
>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
Length = 831
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/384 (50%), Positives = 251/384 (65%), Gaps = 25/384 (6%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCR 80
+L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP +++C+
Sbjct: 29 NLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLICQ 88
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASD 136
+ + + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASD
Sbjct: 89 LHDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASD 145
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRGQP+RHLLTTG
Sbjct: 146 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTG 205
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAH
Sbjct: 206 WSVFVSAKRLVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLAAAAH 265
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE E+S RR+ GT
Sbjct: 266 AASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 325
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I V D +W S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 326 ITEVSDADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVK 384
Query: 373 RPRSIDIPASASAFWYQGSTQSHD 396
P WY G HD
Sbjct: 385 HP------------WYSGVAGLHD 396
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + ++RT KV G +VGR++D+T Y +L +EL +
Sbjct: 706 LQNPMYGCLDDSSGIFQNTGENDPTSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 764
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V +
Sbjct: 765 MFGIRGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKLG 821
>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
Length = 808
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 236/367 (64%), Gaps = 16/367 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTN-QELTHQEPLFDLPSKILCRV 81
+Y ELW ACAGPL +P+ G V YFPQGH+E+ +S+ + P F L +I CRV
Sbjct: 58 IYMELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDLPTFGLHPQIFCRV 117
Query: 82 VHIELLAEQETDEVYAQITLHP---------ETDQTEPRSPDQCLP--EPPKQTVHSFCK 130
++LLA +E DEVY Q++L P E + E D+ P K H FCK
Sbjct: 118 DDVQLLANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCK 177
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EW+F+HI+RGQPRR
Sbjct: 178 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 237
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV+ K LV+GDA +FLRGE G+LR+G+RR A ++++P S+I SQ V
Sbjct: 238 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQYSGSDV 297
Query: 251 LATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
L+ A AV T + F V+Y PR S F++ KY++++ VG RFKMRF+ +DSPER
Sbjct: 298 LSAVASAVSTKSAFNVFYSPRASHADFVVPYQKYVKSIKTRIPVGTRFKMRFDLDDSPER 357
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQ 366
R++G + G+ D +WP SKWR L ++WDE ERVSPWEI+ V+ PL++ +
Sbjct: 358 RYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSVSLPPLSIQSS 417
Query: 367 PAVKSKR 373
P +K R
Sbjct: 418 PRLKKLR 424
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRD 594
KE ++ R+ TKV Q +GR DL+ L G+ DL ELE++ I+ L P+
Sbjct: 667 KEPSAPNSQSSGKRSCTKVHKQRGLIGRPFDLSGLNGHADLLVELERLLNIEDLLSDPKK 726
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
W +++TD + D+M+ G D W EFC++V KI IY+ EEV+ M
Sbjct: 727 GWRILYTDSDNDLMVVGGDPWHEFCEVVSKIHIYTQEEVEKM 768
>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
Length = 524
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 201/420 (47%), Positives = 269/420 (64%), Gaps = 20/420 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD-LPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH Q+ ASTN+E+ P + LP +++C++
Sbjct: 21 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTNKEVDAHIPNYPGLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----PPKQTVHSFCKILTASD 136
++ + A+ ETDEVYAQ+TL P + Q + D CL P K + FCK LTASD
Sbjct: 81 HNLTMHADVETDEVYAQMTLQPLSPQEQK---DVCLLPAELGIPSKLPTNYFCKTLTASD 137
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A + PPLD + P QEL AKDLHG EW+ +HIFRGQP+RHLLTTG
Sbjct: 138 TSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKLRHIFRGQPKRHLLTTG 197
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV++KRLVAGDA +F+ EN +L +G+RR Q+ MP SV+SS SMH+G+LA AAH
Sbjct: 198 WSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPFSVLSSDSMHIGLLAAAAH 257
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT 313
A T+T F ++Y PR S+F+I L KY +AV+H SVGMRF+M FE E+S RR+ GT
Sbjct: 258 ATATNTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYMGT 317
Query: 314 IVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G+ D WP S WRS+K+ WDE +R RVS WEIEP + + P+ + +++ K
Sbjct: 318 ITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPFSLRLK 376
Query: 373 RPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVR-----PMRQKEIDSTII 427
RP +P S F G T + ++ + G Q +S + P Q +D++++
Sbjct: 377 RPWPSGLP-SLPGFPNVGLTMNSPLSWLRGDMGDQGMQSLNFQGFGATPFMQPRMDASML 435
>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
Length = 903
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/352 (51%), Positives = 239/352 (67%), Gaps = 11/352 (3%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 40 LKDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 99
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPKQTVHSF 128
+LPS+++C+V ++ L A++++DE+YAQ++L P + + P L K F
Sbjct: 100 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGGSKHPTEFF 159
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A + PPLD T PTQEL +DLH W F+HI+RGQP
Sbjct: 160 CKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQP 219
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
+RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+
Sbjct: 220 KRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHI 279
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC---FSVGMRFKMRFEGE 303
GVLA AAHA T F+++Y PR ++F+I L KY +A+ C SVGMRF M FE E
Sbjct: 280 GVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAI--CGSQLSVGMRFGMMFETE 337
Query: 304 DSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
DS +RR+ GTIVG+ D +WPGSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 338 DSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 389
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 14/138 (10%)
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAV 561
SG G++ + DFD S L + +G + K+ + RT TKVQ G +V
Sbjct: 758 NSGGTGTSSSNVDFDDS---SLLQNSKG--------SSWKKIATPRVRTYTKVQKTG-SV 805
Query: 562 GRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDK-WAVVFTDDEGDMMLAGDDQWPEFC 619
GR++D+T+ K Y +L +E MF ++G L +P+ W +V+ D E D++L GDD W EF
Sbjct: 806 GRSIDVTSFKDYKELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESDVLLVGDDPWEEFV 865
Query: 620 KMVKKIFIYSTEEVKNMA 637
V+ I I S EV+ M+
Sbjct: 866 GCVRCIRILSPTEVQQMS 883
>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 771
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 190/370 (51%), Positives = 228/370 (61%), Gaps = 67/370 (18%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQ-EPLFDLPSKI 77
G L+ ELWKACAGPL VP GE+VYY PQGHIEQ+EASTNQ Q PL++LP KI
Sbjct: 17 GKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKI 76
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL------PEPPKQT----VHS 127
C++++IEL E +TDEVYAQ+TL P+ Q E S P P +HS
Sbjct: 77 PCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHS 136
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EWRF+HIFRGQ
Sbjct: 137 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQ 196
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLL +GWS FV++KRLVAGDAF+FLR E V R
Sbjct: 197 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR------------------- 237
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
Y E++ +S+GMRFKMRFEGE++ E
Sbjct: 238 ----------------------------------YYESLKRNYSIGMRFKMRFEGEEAAE 263
Query: 308 RRFTGTIVGVGDFSEQ-WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
+RFTGTIVG+G W SKWRSLK++WDEP+++ RPERVSPW+IEP V +P ++
Sbjct: 264 QRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSV--SPCHVNP 321
Query: 367 PAVKSKRPRS 376
V+ KR RS
Sbjct: 322 LPVRFKRSRS 331
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWA 597
QNK S+ STR+ KV QG A+GR++DLT YD+L EL++MF+ G+L+ P W
Sbjct: 634 QNKVQSS-STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWL 692
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
VV+TD+EGD+ML GDD W EFC MV KIFIY+ EEV+ M
Sbjct: 693 VVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERM 731
>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 251/366 (68%), Gaps = 8/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G R YFPQGH EQ+ ASTN+E+ P + LP++++C++
Sbjct: 5 LNSELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQLICQL 64
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + D+ + L KQ + FCK LTASDTST
Sbjct: 65 HNVTMHADVETDEVYAQMTLQPLSPEDKKDAYLLPAELGTASKQPSNYFCKTLTASDTST 124
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 125 HGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 184
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 185 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 244
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PRT S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 245 TNSRFTIFYNPRTSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 304
Query: 317 VGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 305 ISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSAFPMRLKRPW 363
Query: 376 SIDIPA 381
+P+
Sbjct: 364 PSGLPS 369
>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 934
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 182/337 (54%), Positives = 235/337 (69%), Gaps = 5/337 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + T Q P + +LPS++LC+V
Sbjct: 44 LNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQV 103
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ L A++ETDE+YAQ+TL P + E + K FCK LTASDTSTHG
Sbjct: 104 QNATLHADKETDEIYAQMTLQPLNSEREVFPISDFGLKHSKHPSEFFCKTLTASDTSTHG 163
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R+ A + PPLD T+ PTQEL +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 164 GFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 223
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
SKRL AGD+ +F+R E +LRVGVRR+ QQ+++PSSV+S+ SMH+GVLA AAHA
Sbjct: 224 GSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 283
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
+ F ++Y PR S+F+I L KY ++V SVGMRF M FE E+S +RR+ GTIVG+
Sbjct: 284 SPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGIS 343
Query: 319 DFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
D +WPGSKWR+++++WDEP + RVS WEIE
Sbjct: 344 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 380
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR--DKWAVV 599
Q A RT TKVQ G +VGR++D+T K Y++L +E MF + G L W +V
Sbjct: 821 QQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLV 879
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAI 654
+ D E D++L GDD W EF V+ I I S EV+ M+ + +S +G +
Sbjct: 880 YVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGMNV 934
>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 929
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 181/337 (53%), Positives = 235/337 (69%), Gaps = 5/337 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P+ G V+YFPQGH EQ+ AST + T Q P + +LP ++LC+V
Sbjct: 41 LNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPYQLLCQV 100
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
++ L A++ETDE+YAQ+TL P + E + K FCK LTASDTSTHG
Sbjct: 101 QNVTLHADKETDEIYAQMTLQPLNSEREVFPISDFGHKHSKHPSEFFCKTLTASDTSTHG 160
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R+ A + PPLD T+ PTQEL +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 161 GFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFV 220
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
SKRL AGD+ +F+R E +LRVGVRR+ QQ+++PSSV+S+ SMH+GVLA AAHA
Sbjct: 221 GSKRLRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANR 280
Query: 262 TLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
+ F ++Y PR S+F+I L KY ++V SVGMRF M FE E+S +RR+ GTIVG+
Sbjct: 281 SPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGIS 340
Query: 319 DFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
D +WPGSKWR+++++WDEP + RVS WEIE
Sbjct: 341 DVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 377
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR--DKWAVV 599
Q A RT TKVQ G +VGR++D+T K Y++L +E MF + G L W +V
Sbjct: 816 QQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKCSGWKLV 874
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAI 654
+ D E D++L GDD W EF V+ I I S EV+ M+ + +S +G +
Sbjct: 875 YVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGMNV 929
>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
Length = 771
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/392 (45%), Positives = 250/392 (63%), Gaps = 31/392 (7%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ AS + P +DL +I C+V +
Sbjct: 42 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPLDVPTYDLHPQIFCKVAN 100
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSPDQCL-----------PEPPKQTVHSFCKIL 132
++LLA +E DEVY Q+TL P+ + + L P K T H FCK L
Sbjct: 101 VQLLANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKSTPHMFCKTL 160
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPL P+QEL AKDLHG EW+F+HI+RGQPRRHL
Sbjct: 161 TASDTSTHGGFSVPRRAAEDCFPPLQ----RPSQELVAKDLHGVEWKFRHIYRGQPRRHL 216
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV+ K+LV+GDA +FLRGENGELR+G+RR A ++ +P S++ +QS + L+
Sbjct: 217 LTTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPNFLS 276
Query: 253 TAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
+ A+A+ ++F V+Y PR S F++ +KY+ ++ + +VG RFKM+F+ ++SPERR
Sbjct: 277 SVANAISARSMFHVFYSPRASHADFVVPYHKYVRSIKNPVTVGTRFKMKFDMDESPERRS 336
Query: 311 T----------GTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
T G + G+ D +WP SKWR L ++WDE +RVSPWE++P +
Sbjct: 337 TTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVDPSASL 396
Query: 360 APLNLAQPAVKSKRPRSIDIPASASAFWYQGS 391
+PL++ Q + + K+PR+ D+ A + GS
Sbjct: 397 SPLSI-QASRRLKKPRT-DLEADSPNHLITGS 426
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 9/156 (5%)
Query: 485 SNTAAPLGRKVVDPTTGTSGVKGS-ARAASD--FDASQNQDLKEVKRGMADVSRKETQNK 541
S+ P +K+ D +GT+ G+ R +D FD N K G +QN
Sbjct: 581 SDLTIPNEQKLQDNISGTAASLGANIRILNDDNFDGKVNA-CKLF--GFPLSGESTSQNL 637
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVF 600
Q +A R+ TKV QG VGRA+DL+ L Y+DL ELE++F ++G LR DK W V++
Sbjct: 638 QNTAK--RSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFSMEGLLREPDKGWRVLY 695
Query: 601 TDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
TD E D+M+ GDD W EFC +V KI IY+ EEV+ M
Sbjct: 696 TDRENDIMVVGDDPWHEFCNVVSKIHIYTQEEVEKM 731
>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
Length = 836
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 240/351 (68%), Gaps = 10/351 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + LW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 28 LKDQSGTRKPVINSMLWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 87
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P +++ PD L K FC
Sbjct: 88 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVLPVPDLGLLRGSKHPSEYFC 147
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD T PTQEL +DLH W F+HI+RGQP+
Sbjct: 148 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPK 207
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+G
Sbjct: 208 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 267
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC---FSVGMRFKMRFEGED 304
VLA AAHA T F++++ PR ++F+I L KY +A+ C SVGMRF M FE ED
Sbjct: 268 VLAAAAHATANRTPFLIFFNPRACPAEFVIPLPKYRKAI--CGSQLSVGMRFGMMFETED 325
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
S +RR+ GTIVG+ D +WPGSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 326 SGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 539 QNKQGS-----AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RP 592
QN +GS RT TKVQ G +VGR++D+T+ + Y++L +E MF ++G L RP
Sbjct: 715 QNSKGSWQKLATPRVRTYTKVQKTG-SVGRSIDVTSFRDYEELKTAIECMFGLEGLLTRP 773
Query: 593 RDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ W +V+ D E D++L GDD W EF V+ I I S EV+ M+
Sbjct: 774 KTSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 819
>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
Length = 867
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/351 (51%), Positives = 240/351 (68%), Gaps = 10/351 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L Q G + ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + T Q P +
Sbjct: 38 LKDQSGTRKPVINSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNY 97
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P +++ P+ L K FC
Sbjct: 98 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPEFGLLRGSKHPSEFFC 157
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD T PTQEL +DLH W F+HI+RGQP+
Sbjct: 158 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPK 217
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+G
Sbjct: 218 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 277
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC---FSVGMRFKMRFEGED 304
VLA AAHA T F+++Y PR ++F+I + KY +A+ C SV MRF M FE ED
Sbjct: 278 VLAAAAHATANRTPFLIFYNPRACPAEFVIPIAKYRKAI--CGSQLSVSMRFGMMFETED 335
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
S +RR+ GTIVG+ D +W GSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 336 SGKRRYMGTIVGISDLDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 386
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 14/138 (10%)
Query: 502 TSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAV 561
SG G++ + DFD S + S+ Q K + RT TKVQ G +V
Sbjct: 722 NSGGTGTSSSNVDFDDS----------SLLQNSKGSWQQKLATP-RVRTYTKVQKTG-SV 769
Query: 562 GRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDK-WAVVFTDDEGDMMLAGDDQWPEFC 619
GR++D+T+ + Y +L +E MF ++G L RP+ W +V+ D E D++L GDD W EF
Sbjct: 770 GRSIDVTSFRDYKELKSAIECMFGLEGLLTRPQSSGWKLVYVDYESDVLLVGDDPWEEFV 829
Query: 620 KMVKKIFIYSTEEVKNMA 637
VK I I S EV+ M+
Sbjct: 830 GCVKCIRILSPTEVQQMS 847
>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
Length = 811
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/367 (48%), Positives = 235/367 (64%), Gaps = 16/367 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQ-LEASTNQELTHQEPLFDLPSKILCRV 81
+Y+ELW ACAGPL +P+ G V YFPQGH+E+ + A + P F L +I CRV
Sbjct: 59 IYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTFGLQPQIFCRV 118
Query: 82 VHIELLAEQETDEVYAQITLHP---------ETDQTEPRSPDQ--CLPEPPKQTVHSFCK 130
++LLA +E DEVY Q+TL P E + E D+ P K H FCK
Sbjct: 119 EDVQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCK 178
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDT+THGGFSV R+ A +C PPLD P+QEL AKDLHG EW+F+HI+RGQPRR
Sbjct: 179 TLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 238
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV+ K LV+GDA +FLRGE G LR+G+RR A ++ +P S+I SQ V
Sbjct: 239 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGPDV 298
Query: 251 LATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
L++ A A+ + F V+Y PR S F++ KY++A++ VG RFKM+F+ +DSPER
Sbjct: 299 LSSVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAINSRIPVGTRFKMKFDLDDSPER 358
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQ 366
R++G + G+ D +WP SKWR L ++WDE ERVSPWEI+ V+ PL++ +
Sbjct: 359 RYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVSLPPLSIQSS 418
Query: 367 PAVKSKR 373
P +K R
Sbjct: 419 PRLKKLR 425
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRD 594
KE ++ R+ TKV QG VGRA+DL+ L GYDDL ELE++F ++ LR P
Sbjct: 670 KEPSTPSSQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNMEDLLRDPNK 729
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
W +++TD E DMM+ GDD W EFC++V KI IY+ EEV+ M
Sbjct: 730 GWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKM 771
>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
Length = 833
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/411 (47%), Positives = 256/411 (62%), Gaps = 36/411 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 82 VHIELLAEQETDEVYAQITLHP--------------ETDQTEPRSPDQCLPEP----PKQ 123
+ + A+ ETDEVYAQ+TL P + D LP KQ
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQ 147
Query: 124 TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHI 183
+ FCK LTASDTSTHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HI
Sbjct: 148 PTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHI 207
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISS 243
FRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS
Sbjct: 208 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSS 267
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRF 300
SMH+G+LA AAHA T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M F
Sbjct: 268 DSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLF 327
Query: 301 EGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
E E+S RR+ GTI V D +WP S WRS+K+ WDE +RP RVS WEIEP + +
Sbjct: 328 ETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTT 386
Query: 360 APLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P+ + ++ K P WY G HD + + G + E
Sbjct: 387 FPMYPSLFPLRVKHP------------WYSGVASLHDDSNALMWLRGVAGE 425
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 708 LQNAMYGCLDDSSGLLQNTGENDPATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 766
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 767 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 823
>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
Length = 714
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 188/398 (47%), Positives = 249/398 (62%), Gaps = 34/398 (8%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL--FDLPSKILCRVVH 83
ELW ACAGPL+ +P+ G V YFPQGH+EQL PL +DLPS + CRVV
Sbjct: 49 ELWHACAGPLISLPKRGSVVVYFPQGHLEQLP---------DLPLAVYDLPSHVFCRVVD 99
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----------TVHSFCKILT 133
++L AE +DEVYAQ++L PE+++ E + + ++ T H FCK LT
Sbjct: 100 VKLHAEAASDEVYAQVSLVPESEEIEQKLREGIFEGDGEEEDGEATVKMTTPHMFCKTLT 159
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSV R+ A +C PPLD T P+QEL AKDLHG EW+F+HI+RGQPRRHLL
Sbjct: 160 ASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLL 219
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV K+LV+GDA +FLRGE+GELR+GVRR A + + ++
Sbjct: 220 TTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPAQWNHQLNQISPGD 279
Query: 254 AAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A+A+ T + F +YY PR +S+FII NK+L+++ FS GMRFKMRFE ED+ ERR+T
Sbjct: 280 VANAISTRSFFHIYYNPRASSSEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDAAERRYT 339
Query: 312 GTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL---NLAQP 367
G I GV + +WPGSKW+ L ++WD+ R RVSPWE+EP + + N P
Sbjct: 340 GIITGVSELDPARWPGSKWKCLLVRWDD-REANRLSRVSPWEVEPSGSGSISSSNNFMAP 398
Query: 368 AVKSKR---PRS---IDIPASASAFWYQGSTQSHDITQ 399
+K R P S IP A ++ S++S ++ Q
Sbjct: 399 GLKRSRSGLPSSKAEFPIPDGIGAPGFRESSRSQEVLQ 436
>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
Length = 949
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 233/335 (69%), Gaps = 7/335 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G VYYFPQGH EQ+ ST + T Q P + +LPS+++C+V ++
Sbjct: 46 ELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVQNV 105
Query: 85 ELLAEQETDEVYAQITLHPETDQTEP-RSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A++++DE+YAQ++L P + + PD L P K FCK LTASDTSTHGGF
Sbjct: 106 TLHADKDSDEIYAQMSLQPVNSEKDVFLVPDFGL-RPSKHPNEFFCKTLTASDTSTHGGF 164
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD T+ PTQEL +DLH W F+HI+RGQP+RHLLTTGWS FV +
Sbjct: 165 SVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGA 224
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +GVRR QQ+++PSSV+S+ SMH+GVLA AAHA +
Sbjct: 225 KRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSP 284
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
F ++Y PR S+F+I L KY + V+ S GMRF M FE E+S +RR+ GTIVG+ D
Sbjct: 285 FTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMGTIVGISDL 344
Query: 321 SE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+WPGSKWR+L+++WDEP + RVS WEIE
Sbjct: 345 DPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK-WAVVFTDDEGD 606
RT TKVQ G +VGR++D+T+ K YD+L +E MF ++G L PR W +V+ D E D
Sbjct: 835 RTYTKVQKAG-SVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 893
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEG 651
++L GDD W EF V+ I I S EV+ M+ + +S +G
Sbjct: 894 VLLIGDDPWEEFVSCVRCIRILSPSEVQQMSEEGMKLLNSAMMQG 938
>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
Length = 924
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 236/341 (69%), Gaps = 8/341 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G V YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 17 LNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQL 76
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSP--DQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P Q EP+ L P Q + FCK LTASDTST
Sbjct: 77 HNVTLQADVETDEVYAQMTLQPLNPQ-EPKESYLAPALGTPSGQPTNYFCKTLTASDTST 135
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFS+ R+ A + P LD T P QEL A+DLH EW+F+HI+RGQP+RHLLTTGWS
Sbjct: 136 HGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKRHLLTTGWSV 195
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+R + G+L +G+RR Q MPSSV+SS SMH+GVLA AAHA
Sbjct: 196 FVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIGVLAAAAHAAS 255
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T+ F ++Y PR S+F++ L K+ +AV+H S+GMRF+M FE E+S RR+ GTI G
Sbjct: 256 TNCRFTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEESTVRRYMGTITG 315
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF 356
+GD +W S+WRS+K+ WDE +R RVS WEIEP
Sbjct: 316 IGDLDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEPL 356
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
TRT TKV G +VGR++D+T GY +L EL++MF ++GQL R W +VF D E
Sbjct: 791 TRTFTKVYKLG-SVGRSLDVTRFNGYQELRAELDRMFGLEGQLEDPQRSGWQLVFVDKEK 849
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W EF V+ I I S EV M+
Sbjct: 850 DVLLLGDDPWEEFVNSVRFIKILSPPEVMQMS 881
>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
Length = 950
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/335 (54%), Positives = 234/335 (69%), Gaps = 7/335 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + T Q P + +L S++LC+V ++
Sbjct: 45 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLASQLLCQVHNV 104
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+++TDE+YAQ++L P + + PD L +P K FCK LTASDTSTHGGF
Sbjct: 105 TLHADRDTDEIYAQMSLQPVNSEKDVFPIPDFGL-KPSKHPSEFFCKTLTASDTSTHGGF 163
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD T+ PTQEL +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 164 SVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGS 223
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L VGVRR QQ+++PS V+S+ SMH+GVLA AAHA +
Sbjct: 224 KRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIGVLAAAAHAAANRSP 283
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
F ++Y PR S+F+I L KY +AV SVGMRF M FE E+S +RR+ GTIVG+ D
Sbjct: 284 FTIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGISDL 343
Query: 321 SE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+WPGSKWR+L+++WDEP + RVS WEIE
Sbjct: 344 DPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIE 378
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK-WAVV 599
Q A RT TKVQ G +VGR++D++ K Y++L +E MF ++G L PR+ W +V
Sbjct: 829 QQVAPRVRTYTKVQKAG-SVGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLV 887
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISL 656
+ D E D++L GDD W EF V+ I I S EV+ M+ + ++V +G A S+
Sbjct: 888 YVDYENDVLLIGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNNVNMQGLAASI 944
>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
Length = 758
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/366 (48%), Positives = 234/366 (63%), Gaps = 17/366 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW ACAGPL +P+ G V YFPQGH+EQ A + P DL +I CRV
Sbjct: 50 IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-GAMVSYSSPLDIPKLDLSPQIFCRVA 108
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----------PPKQTVHSFCKI 131
++ LLA +ETDEVY Q+TL P + + + + E K+T H FCK
Sbjct: 109 NVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTPHMFCKT 168
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A +C PLD P+QEL AKDLHG EW+F+HI+RGQPRRH
Sbjct: 169 LTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 228
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV+ K LV+GDA +FLR ENGELR+G+RR A ++ +P S+I S +L
Sbjct: 229 LLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSS-SIL 287
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
+ A+AV ++F V+Y PR S+F+I KY+ ++ + +G RF+MRFE +DSPERR
Sbjct: 288 SLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSIKNPICIGTRFRMRFEMDDSPERR 347
Query: 310 FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
G + GV D +WP SKWR L ++WDE ERVSPWEI+P + PL++ Q +
Sbjct: 348 CAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDPSGSLPPLSI-QSS 406
Query: 369 VKSKRP 374
+ KRP
Sbjct: 407 PRPKRP 412
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 540 NKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAV 598
N+Q S S R TKV QG VGRA+DL+ L GY+DL ELE++F ++G LR P W +
Sbjct: 630 NQQSS--SKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEKGWRI 687
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKN 635
++TD E DMM+ GDD W +FC +V KI +Y+ EEV+N
Sbjct: 688 LYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVEN 724
>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
Length = 822
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/409 (44%), Positives = 253/409 (61%), Gaps = 29/409 (7%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ+ AS + + + P + L +ILCRVV+
Sbjct: 54 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASLSLFSSLEIPTYGLQPQILCRVVN 112
Query: 84 IELLAEQETDEVYAQITLHPET-------DQTEPR----SPDQCLPEPPKQTVHSFCKIL 132
++LLA +E DEVY Q+ L P+ D EP + P K H FCK L
Sbjct: 113 VQLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG------ 186
TASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG W+F+HI+RG
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETEL 232
Query: 187 ------QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV 240
QPRRHLLTTGWS FV+ K LV+GDA +FLRGENGELR+G+RR A ++ +P S+
Sbjct: 233 LCWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESI 292
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKM 298
I +QS L++ A+A+ ++F V+Y PR S F++ KY +++ + ++G RFKM
Sbjct: 293 IGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKM 352
Query: 299 RFEGEDSPERRF-TGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF 356
+FE ++SPERR +G + G+ D +WP SKWR L ++WDE +RVSPWEI+P
Sbjct: 353 KFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPS 412
Query: 357 VASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATE 405
+ PLN+ Q + + K+ R+ S S F G + D + + +++
Sbjct: 413 TSLPPLNI-QSSRRLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSK 460
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 86/144 (59%), Gaps = 14/144 (9%)
Query: 505 VKGSARAASDFDA----SQNQDLKEVKR-------GMADVSRKETQNKQGSAASTRTRTK 553
++ AA+ DA S +++ KE+ ++ + +QN Q SA R+ TK
Sbjct: 641 LQNDISAATSLDANIRISNDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAK--RSCTK 698
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGD 612
V QG VGRA+DL+ L Y+DL ELE++F ++G LR DK W +++TD E D+M+ GD
Sbjct: 699 VHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGD 758
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNM 636
D W EFC MV KI IY+ EEV+ M
Sbjct: 759 DPWHEFCDMVSKIHIYTQEEVEKM 782
>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 249/366 (68%), Gaps = 8/366 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 5 LNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQL 64
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + DQ + L KQ + FCK LTASDTST
Sbjct: 65 HNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQPTNYFCKTLTASDTST 124
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 125 HGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSV 184
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ E +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 185 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAAHAAA 244
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 245 TNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 304
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +WP S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KRP
Sbjct: 305 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSAFPMRLKRPW 363
Query: 376 SIDIPA 381
+P+
Sbjct: 364 PSGLPS 369
>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
Length = 838
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/368 (50%), Positives = 247/368 (67%), Gaps = 13/368 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV Y PQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKEIDAHIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P T Q + D +P P KQ + FCK LTASDT
Sbjct: 80 HDVTMHADVETDEVYAQMTLQPLTQQEQK---DAYVPTVLGFPSKQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD T P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 196
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ + +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 197 SVFVSAKRLVAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHA 256
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I K+ +AV+H SVGMRF+M FE E+S RR+ GTI
Sbjct: 257 AATNSRFTIFYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESGVRRYMGTI 316
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G D +W S WRS+K+ WDE +R RVS W+IEP + + P+ + A++ KR
Sbjct: 317 TGKCDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEP-LTTFPMYPSPFALRLKR 375
Query: 374 PRSIDIPA 381
P +P+
Sbjct: 376 PWQPGLPS 383
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDMMLAGDDQWPE 617
VGR +D++ Y++L ++ MF ++GQL R W +VF D E D +L GD W
Sbjct: 718 CVGRTLDISQFSSYEELRGKVADMFGLEGQLDDPLRSGWQLVFVDRENDALLLGDGPWEA 777
Query: 618 FCKMVKKIFIYSTEEVKNMATS 639
F V I I S +++ M T+
Sbjct: 778 FVNNVWYIKILSPHDIQMMGTN 799
>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 758
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/383 (50%), Positives = 252/383 (65%), Gaps = 15/383 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAG LV +P G RV YFPQGHIEQ+ AST +E P + LPS++ C +
Sbjct: 4 LNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLFCLL 63
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P +++ +PD +P KQ FCK LTASDTST
Sbjct: 64 DNVSLHADHETDEVYAQMTLLPIQNSEKEALLAPDSVIPN--KQPSEYFCKTLTASDTST 121
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFS+ R+ A + PPLD T + P QEL A+DLH +W F+HI+RGQPRRHLLTTGWS
Sbjct: 122 HGGFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLTTGWSV 181
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV+ KRL AGD+ +F+R + L +G+RR QQS MPSSV+SS SMH GVLA A+HA
Sbjct: 182 FVSIKRLQAGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFGVLAAASHAAA 241
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
TS+ F ++Y PR S+F+I L KY +A+++ ++GMRF+M FE E+S R++ GTI
Sbjct: 242 TSSRFKIFYNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESNVRKYMGTITC 301
Query: 317 VGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP--AVKSKR 373
+GD +WP S WRSLK+ WDE R RVS WEIEP P L P A++SKR
Sbjct: 302 IGDLDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIEP--TPTPFLLCPPPVALRSKR 359
Query: 374 PR--SIDIPASASAFWYQGSTQS 394
P+ ++++ S W GS S
Sbjct: 360 PQEDALEMLMKKSHMWPHGSDPS 382
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 551 RTKVQMQGI-AVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTDDEGDM 607
RT Q+ + +VGR++D+ Y +L EL + F++ + W +VF D+E D
Sbjct: 670 RTCFQVHKLGSVGRSLDVRNFSNYTELRQELARRFQLDCLMEDPSSSGWQIVFVDNEDDT 729
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+L GDD W EF K VK I I S EV M
Sbjct: 730 LLLGDDPWEEFAKFVKTIKILSPSEVAQM 758
>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
Length = 718
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 178/360 (49%), Positives = 234/360 (65%), Gaps = 21/360 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V Y PQGH EQ + +++P+ + CRV+ ++
Sbjct: 49 ELWHACAGPLISLPKKGSVVVYIPQGHFEQAQ-------DFPVTAYNIPTHVFCRVLDVK 101
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR----SPDQCLPEPPKQTV-----HSFCKILTASD 136
L AE+ +DEVY Q+ L PE++Q E D E + V H FCK LTASD
Sbjct: 102 LHAEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEAMVKSTTPHMFCKTLTASD 161
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EW+F+HI+RGQPRRHLLTTG
Sbjct: 162 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTG 221
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV K+LV+GDA +FLRG++GELR+G+RR A +S + S Q + G L A+
Sbjct: 222 WSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGTLMDVAN 281
Query: 257 AVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
A+ + F Y PR +S+FII +NK+++++ +SVGMRF+MRFE EDS ERRFTG +
Sbjct: 282 ALSSRCAFSACYNPRVSSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDSAERRFTGLV 341
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
+G+ D +WPGSKWR L ++WD+ R RVSPWEIEPF SA NL +K R
Sbjct: 342 LGISDVDPVRWPGSKWRCLLVRWDD-IEAGRHNRVSPWEIEPF-GSASNNLMAAGLKRTR 399
>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
Length = 954
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 233/335 (69%), Gaps = 7/335 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G YYFPQGH EQ+ ST + T Q P + +LPS++LC+V ++
Sbjct: 46 ELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLLCQVQNV 105
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A++ETDE+YAQ++L P + + PD L +P K FCK LTASDTSTHGGF
Sbjct: 106 TLHADKETDEIYAQMSLKPVNSEKDVFPVPDFGL-KPSKHPSEFFCKTLTASDTSTHGGF 164
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD T+ P+QEL +DLH W F+HI+RGQP+RHLLTTGWS FV +
Sbjct: 165 SVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKRHLLTTGWSLFVGA 224
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +GVRR QQ+++PSSV+S+ SMH+GVLA AAHA +
Sbjct: 225 KRLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSP 284
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
F ++Y PR S+F+I L Y +A++ SVGMRF M FE E+S +RR+ GTIV D
Sbjct: 285 FTIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGKRRYMGTIVSTSDL 344
Query: 321 SE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+WPGSKWR+L+++WDEP + RVS WEIE
Sbjct: 345 DPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK-WAVVFTDDEGD 606
RT TKVQ G +VGR++D+T+ K Y++L +E MF ++G L PR W +V+ D E D
Sbjct: 840 RTYTKVQKTG-SVGRSIDVTSFKNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 898
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEG 651
++L GDD W EF V+ I I S EV+ M+ + +S +G
Sbjct: 899 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGIKLLNSAAMQG 943
>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
Length = 925
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 245/360 (68%), Gaps = 12/360 (3%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
M+ VE N GG S + ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST
Sbjct: 2 MSSVEENIKA-----GGLVSEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVST 56
Query: 61 NQELTHQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLP 118
+ T Q P + +LPS+++C+V ++ L A+++TDE+YAQ++L P + + PD L
Sbjct: 57 KRTATSQIPNYPNLPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIFPIPDFGL- 115
Query: 119 EPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW 178
+P K FCK LTASDTSTHGGFSV R+ A + PPLD ++ PTQEL +DLH +
Sbjct: 116 KPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITY 175
Query: 179 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS 238
F+HI+RGQP+RHLLTTGWS FV++KRL AGDA +F+R E +L +GVRR QQ+S+PS
Sbjct: 176 TFRHIYRGQPKRHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPS 235
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMR 295
SV+S+ SMH+GVLA AAHA + F ++Y PR S+F+I L KY ++V+ SVGMR
Sbjct: 236 SVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMR 295
Query: 296 FKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
F M FE E+S +RR+ GTIVG+ D WPGSKWR+L+++WDE + RVS WEIE
Sbjct: 296 FGMMFETEESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 355
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR--DKWAV 598
+Q + RT TKVQ G +VGR++D+ + K Y++L +E MF ++G L + W +
Sbjct: 807 QQVAPPPMRTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKL 865
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISL 656
V+ D E D++L GDD W EF V+ I I S EV+ M+ + +S EG S+
Sbjct: 866 VYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQLLNSTAIEGINDSI 923
>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
Length = 840
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 185/376 (49%), Positives = 247/376 (65%), Gaps = 24/376 (6%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
+G + E+W+ACAG L+ +PR G V YF QGH+EQ AS + + LP ++
Sbjct: 22 AAGTVCLEVWQACAGSLISLPRKGSVVVYFXQGHLEQAGASCDG--------WGLPPQVF 73
Query: 79 CRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ---------TVHSFC 129
CRV+++ L A+Q +DEVYAQ++L P + E P++ + E ++ T H FC
Sbjct: 74 CRVINVNLHADQVSDEVYAQVSLTPIPEPVEKGLPEEEVREDGEEEFEFVSRSATPHMFC 133
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG+EW+F+HI+RGQPR
Sbjct: 134 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHIYRGQPR 193
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQ-SSMPSSVISSQSMHL 248
RHLLTTGWS FV K+LVAGDA +FLRGE+GELR+G+RR + S+PS + SQ++
Sbjct: 194 RHLLTTGWSVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGSVPSLALLSQNLSG 253
Query: 249 GVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
A + AV T ++F V Y PR S +FI+ KY + + FS+GMRFKM+ E ED+
Sbjct: 254 STFAAVSKAVSTKSVFHVSYNPRASPAEFIVPYWKYYKNFNQQFSLGMRFKMKIETEDTA 313
Query: 307 ERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
ERR TG I GVGD +WPGSKWR L ++WDE + R +RVSPWEI+ + S P+ +
Sbjct: 314 ERRCTGLISGVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEID-LLGSVPV-FS 371
Query: 366 QPAVKSKRPRSIDIPA 381
PA KRPR I +P+
Sbjct: 372 PPATGLKRPR-ISLPS 386
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 474 CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 533
C LFG L PL + +DP + + S F S E ++ ++
Sbjct: 636 CRLFGFSLTEE----PPLSNEAMDPAHVSLSSNDDFNSKSSFQPSTWTVSCETQQKQSE- 690
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-P 592
S+ + NK + R+ TKV QG VGRA++L+ +GYDDL ELE++F ++G L P
Sbjct: 691 SKSQCLNK----TANRSCTKVHKQGSMVGRAINLSKFEGYDDLISELERLFNMEGLLNDP 746
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+ W VV+TD + DMML GDD W EFC +V KI IY+ +EV+ M
Sbjct: 747 KKGWQVVYTDSDDDMMLVGDDPWQEFCNIVSKILIYTHDEVEKM 790
>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
Length = 731
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 179/361 (49%), Positives = 235/361 (65%), Gaps = 21/361 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL +P+ G V Y PQGH EQ+ QE +DLP ILCRV+ ++
Sbjct: 46 ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM-----QEFPPTP--YDLPPHILCRVIDVQ 98
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ---------TVHSFCKILTASD 136
L AE +DEVYAQ++L PE +Q E + ++ + ++ T H FCK LTASD
Sbjct: 99 LHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTASD 158
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A +C PPLD P+QEL AKDL G +W+F+HI+RGQPRRHLLTTG
Sbjct: 159 TSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTG 218
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV KRLV+GDA +FLRG +GELR+G+RR A +S S I SQ ++ + +
Sbjct: 219 WSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSIMDVVN 278
Query: 257 AVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
AV + + F V Y PR +SQF++ +K+L++++H FSVG+RF++ FE +D +RR TG I
Sbjct: 279 AVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRRHTGHI 338
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF-VASAPLNLAQPAVKSK 372
GV D +WPGS+WRSL ++WD+ T R RVSPWEIEP S NL P +K
Sbjct: 339 TGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTNLVPPGLKRT 397
Query: 373 R 373
R
Sbjct: 398 R 398
>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
[Cucumis sativus]
Length = 730
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 179/361 (49%), Positives = 235/361 (65%), Gaps = 21/361 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL +P+ G V Y PQGH EQ+ QE +DLP ILCRV+ ++
Sbjct: 46 ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM-----QEFPPTP--YDLPPHILCRVIDVQ 98
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ---------TVHSFCKILTASD 136
L AE +DEVYAQ++L PE +Q E + ++ + ++ T H FCK LTASD
Sbjct: 99 LHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTASD 158
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A +C PPLD P+QEL AKDL G +W+F+HI+RGQPRRHLLTTG
Sbjct: 159 TSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTG 218
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS FV KRLV+GDA +FLRG +GELR+G+RR A +S S I SQ ++ + +
Sbjct: 219 WSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSIMDVVN 278
Query: 257 AVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
AV + + F V Y PR +SQF++ +K+L++++H FSVG+RF++ FE +D +RR TG I
Sbjct: 279 AVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRRHTGHI 338
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF-VASAPLNLAQPAVKSK 372
GV D +WPGS+WRSL ++WD+ T R RVSPWEIEP S NL P +K
Sbjct: 339 TGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTNLVPPGLKRT 397
Query: 373 R 373
R
Sbjct: 398 R 398
>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
Length = 947
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 241/349 (69%), Gaps = 8/349 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
+ Q GP + ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + T Q P +
Sbjct: 31 MQDQSGPRKA-INSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNY 89
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A+++TDE+YAQ++L P + + PD L +P K FC
Sbjct: 90 PNLPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIFPIPDFGL-KPSKHPSEFFC 148
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD ++ PTQEL +DLH + F+HI+RGQP+
Sbjct: 149 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPK 208
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV++KRL AGDA +F+R E +L +GVRR QQ+S+PSSV+S+ SMH+G
Sbjct: 209 RHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIG 268
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSP 306
VLA AAHA + F ++Y PR S+F+I L KY ++V+ SVGMRF M FE E+S
Sbjct: 269 VLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESG 328
Query: 307 ERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+RR+ GTIVG+ D WPGSKWR+L+++WDE + RVS WEIE
Sbjct: 329 KRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 377
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR--DKWAV 598
+Q + RT TKVQ G +VGR++D+ + K Y++L +E MF ++G L + W +
Sbjct: 829 QQVAPPPMRTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKL 887
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISL 656
V+ D E D++L GDD W EF V+ I I S EV+ M+ + +S EG S+
Sbjct: 888 VYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQLLNSTAIEGINDSI 945
>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
Length = 826
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 190/389 (48%), Positives = 254/389 (65%), Gaps = 11/389 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
+SS G + + LW CAGPL+ +P G +V YFPQGH EQ+ AST++E + P +
Sbjct: 4 VSSLTGGDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSY 63
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE---PPKQTVHS 127
+LP ++ C + +I L A+QE DEV+AQ+TL P + + P LP+ KQT+ S
Sbjct: 64 PNLPPQLFCILHNITLHADQENDEVFAQMTLQPFSQTALLKDPF-LLPDFGIQTKQTIVS 122
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
F K LTASDTSTHGGFS+ R+ A + PPLD T P QEL A+DLH EW F+HI+RGQ
Sbjct: 123 FSKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQ 182
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLLTTGWS FV++KRL AGD +FLR E G+ +G+RR QQ+++P+S++SS SM
Sbjct: 183 PRRHLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSML 242
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGED 304
+GVLA AAHA T++ F ++Y PR S+F+I L KY +A+H +VGMRF+M E ED
Sbjct: 243 IGVLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETED 302
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN 363
S RR+ GTI G+GD +WP S WRSLK+ WDE Q+ RVS WEIEP L
Sbjct: 303 SSTRRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLC 362
Query: 364 LAQPAVKSKRPRSI--DIPASASAFWYQG 390
+ ++SKRPR ++ A + W +G
Sbjct: 363 NSSFLLRSKRPRGTEEELQMKAPSIWARG 391
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
RT TKV G +VGR++D+T K Y +L +EL +MF ++ + W +VF D+E DM
Sbjct: 662 VRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHDHK--SGWQLVFIDNENDM 718
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+L GDD W EF VK I I S+ E+ M
Sbjct: 719 LLLGDDPWDEFIGCVKSIRILSSSEILQM 747
>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
Length = 816
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 193/397 (48%), Positives = 253/397 (63%), Gaps = 26/397 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 26 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 85
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 86 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 142
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HIFRG P+RHLLTTGW
Sbjct: 143 STHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLLTTGW 201
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+R Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 202 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHA 261
Query: 258 VKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S +F+I L+KY++AV H SVGMRF+M FE E+S RR+ GTI
Sbjct: 262 AATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTI 321
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P+ + ++ K
Sbjct: 322 TEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFPMYPSLFPLRVKH 380
Query: 374 PRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P WY G HD + + G + E
Sbjct: 381 P------------WYSGLAALHDDSNALMWLRGVTGE 405
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 691 LQSPMYGCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 749
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 750 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 806
>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
Length = 736
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 228/364 (62%), Gaps = 16/364 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP+ +PR G V Y PQGHIE L P LP + CRVV +
Sbjct: 52 ELWHACAGPVAPLPRKGSVVVYLPQGHIEHL-GDAAAAGGGAPPPVALPPHVFCRVVDVT 110
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR---------SPDQCLPEPPKQTV----HSFCKIL 132
L A+ TDEVYAQ+ L E + R + D E KQ H FCK L
Sbjct: 111 LHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMFCKTL 170
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EWRF+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 230
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV K+LV+GDA +FLRG+NGELR+GVRR A ++ + +Q ++LG L
Sbjct: 231 LTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNLGSLP 290
Query: 253 TAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
AHAV T ++F +YY PR SQ FII +K++++ FS G RFK+++E +D+ ERR
Sbjct: 291 NVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASERRC 350
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
TG I G+GD W GSKW+ L ++WD+ ++P R+SPWEIE + + +++ P K
Sbjct: 351 TGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIELTSSVSGSHMSAPNAK 410
Query: 371 SKRP 374
+P
Sbjct: 411 RLKP 414
>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
Length = 835
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/374 (50%), Positives = 248/374 (66%), Gaps = 9/374 (2%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
+SS G + + LW CAGPL+ +P G +V YFPQGH EQ+ AST++E + P +
Sbjct: 4 VSSLAGGDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSY 63
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE---PPKQTVHS 127
+LP ++ C + +I L A+QE DEV+AQ+TL P + + P LP+ KQT+ S
Sbjct: 64 PNLPPQLFCILHNITLHADQENDEVFAQMTLQPFSQTALLKDPF-LLPDFGIQTKQTIVS 122
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
F K LTASDTSTHGGFS+ R+ A + PPLD T P QEL A+DLH EW F+HI+RGQ
Sbjct: 123 FSKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQ 182
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLLTTGWS FV++KRL AGD +FLR E G+ +G+RR QQ+++P+S++SS SM
Sbjct: 183 PRRHLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSML 242
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGED 304
+GVLA AAHA T++ F ++Y PR S+F+I L KY +A+H +VGMRF+M E ED
Sbjct: 243 IGVLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETED 302
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN 363
S RR+ GTI G+GD +WP S WRSLK+ WDE Q+ RVS WEIEP L
Sbjct: 303 SSTRRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLC 362
Query: 364 LAQPAVKSKRPRSI 377
+ ++SKRPR+
Sbjct: 363 NSSFLLRSKRPRAF 376
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
RT TKV G +VGR++D+T K Y +L +EL +MF ++ + W +VF D+E DM
Sbjct: 674 VRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHDHK--SGWQLVFIDNENDM 730
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+L GDD W EF VK I I S+ E+ M
Sbjct: 731 LLLGDDPWDEFIGCVKSIRILSSSEILQM 759
>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
Length = 471
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/390 (45%), Positives = 248/390 (63%), Gaps = 31/390 (7%)
Query: 24 YRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVH 83
Y ELW ACAGPL +P+ G V YFPQGH+EQ AS + + P +DL +I CRVV+
Sbjct: 52 YLELWHACAGPLTSLPKKGNVVVYFPQGHLEQF-ASFSPFKQLEIPNYDLQPQIFCRVVN 110
Query: 84 IELLAEQETDEVYAQITLHPETD-----------QTEPRSPDQCLPEPPKQTVHSFCKIL 132
++LLA +E DEVY Q+TL P+ + + + P K T H FCK L
Sbjct: 111 VQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTL 170
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
T SDTSTHGGFSV R+ A +C PPLD L P+QEL AKDLHG EW+F+HI+RGQPRRHL
Sbjct: 171 TVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 230
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLR--------------GENGELRVGVRRLAHQQSSMPS 238
LTTGWS FV K LV+GDA +FLR G+NGELR+G+RR ++ +P
Sbjct: 231 LTTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRRAVRPRNGLPE 290
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRF 296
S++ +Q+ + L++ A+A+ T ++F V+Y PR S +F++ KY++++ + ++G RF
Sbjct: 291 SIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRF 350
Query: 297 KMRFEGEDSPERRF-TGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
KMR E ++SPERR +G ++G+ D +WP SKWR L ++WD+ +RVSPWEI+
Sbjct: 351 KMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEID 410
Query: 355 PFVASAPLNLAQPAVKSKRPRSIDIPASAS 384
P PL++ Q + + K+PR+ + AS +
Sbjct: 411 PSSPQPPLSI-QSSPRLKKPRTGLLVASPN 439
>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
Length = 736
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 228/364 (62%), Gaps = 16/364 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP+ +PR G V Y PQGHIE L P LP + CRVV +
Sbjct: 52 ELWHACAGPVAPLPRKGSVVVYLPQGHIEHL-GDAAAAGGGAPPPVALPPHVFCRVVDVT 110
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR---------SPDQCLPEPPKQTV----HSFCKIL 132
L A+ TDEVYAQ+ L E + R + D E KQ H FCK L
Sbjct: 111 LHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMFCKTL 170
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EWRF+HI+RGQPRRHL
Sbjct: 171 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHL 230
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV K+LV+GDA +FLRG+NGELR+GVRR A ++ + +Q ++LG L
Sbjct: 231 LTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNLGSLP 290
Query: 253 TAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
AHAV T ++F +YY PR SQ FII +K++++ FS G RFK+++E +D+ ERR
Sbjct: 291 NVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASERRC 350
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
TG I G+GD W GSKW+ L ++WD+ ++P R+SPWEIE + + +++ P K
Sbjct: 351 TGIIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIELTSSVSGSHMSAPNAK 410
Query: 371 SKRP 374
+P
Sbjct: 411 RLKP 414
>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1103
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/401 (48%), Positives = 253/401 (63%), Gaps = 36/401 (8%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQEPLFDLPSKILC----- 79
ELW ACAGPLV +P G RV YFPQGH EQ+ AST +E TH LPS+++C
Sbjct: 77 ELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRLVCLLDNV 136
Query: 80 ----------RVVHIELLAEQETDEVYAQITLHPETDQTEPR---SPDQCLPEPPKQTVH 126
++ + + A+ ETDEVYAQ+TL P E SPD + +Q
Sbjct: 137 TLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPANEKEALMSPDIGIRS--RQPTD 194
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
FCK LTASDTSTHGGFS+ R+ A + PPLD + P QEL A+DLH EW F+HI+RG
Sbjct: 195 YFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHFRHIYRG 254
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWS FV++KRL AGDA +F+R + G+L++G+RR QQ+ MPSSV+SS SM
Sbjct: 255 QPRRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSM 314
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGE 303
H+GVLA A HA TS+ F ++Y PR S+F+I + KY +A+ + SVGMRF+M FE E
Sbjct: 315 HIGVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICNLQVSVGMRFRMVFETE 374
Query: 304 DSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+S RR+ GTI G+GD +WP S WRSLK+ WDE +R RVS WEIEP + P
Sbjct: 375 ESSVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPL--TTPF 432
Query: 363 NLAQPAV--KSKRP------RSIDIPASASAFWYQGSTQSH 395
L P + ++KRP +D ++FW G + SH
Sbjct: 433 LLCPPPLTFRAKRPWGGRVDEEMDSMLKKASFW-SGDSGSH 472
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 24/224 (10%)
Query: 438 VAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKH---NSNTAAPLG-- 492
V QS L+G P ++ ++ E + + S S LFG+ ++ SN+ L
Sbjct: 697 VNGQSGLTGLPV---PTSSFVYRENGQEQDSVQSDRHLLFGVSIEQPLVGSNSVTSLQPH 753
Query: 493 --RKVVDPTTGTSG---VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAA- 546
K DP + SG ++GS + S N D+ + D + +N SA
Sbjct: 754 AFAKSKDPQSRFSGNTVLQGS------YYPSGNADIPTMNGVGLDENGIFMRNASWSAMA 807
Query: 547 -STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDD 603
++RT TKV G +VGR++D+ + Y +L EL ++F ++G L R W +VF D+
Sbjct: 808 PTSRTFTKVHKLG-SVGRSIDVQKFQNYSELRVELARLFNLEGLLDDPQRSGWQLVFVDN 866
Query: 604 EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
E D +L GDD W EF V+ I I S E+ M+ I +SV
Sbjct: 867 ENDTLLVGDDPWEEFVNCVRSIKILSPNEILQMSQEQLEILNSV 910
>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 714
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/378 (47%), Positives = 242/378 (64%), Gaps = 29/378 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL---FDLPSKILCRVV 82
ELW ACAGP++ +P+ G V YFPQGH+EQ H PL ++PS + CRV+
Sbjct: 33 ELWHACAGPMISLPKKGSVVVYFPQGHLEQH--------LHDFPLPASANIPSHVFCRVL 84
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----------TVHSFCKIL 132
++L AE+ +DEVY Q+ L PE++Q + + + ++ T H FCK L
Sbjct: 85 DVKLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDAEAVMKSTTPHMFCKTL 144
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EWRF+HI+RGQPRRHL
Sbjct: 145 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHL 204
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV K+LV+GDA +FLRGE+GELR+G+RR A +S S +S Q L
Sbjct: 205 LTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQGSPTSLM 264
Query: 253 TAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
+A+ F ++Y PR +S+FII ++++++++ + +S GMRF+MRFE ED+ ERRF
Sbjct: 265 DVVNALSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYSYSAGMRFRMRFETEDAAERRF 324
Query: 311 TGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF-VASAPLNLAQPA 368
TG IVG+ D +WPGS+WR L ++WD+ R RVSPWEIEP AS NL
Sbjct: 325 TGLIVGIADVDPVRWPGSRWRCLMVRWDD-LEATRHNRVSPWEIEPSGSASTANNLMSAG 383
Query: 369 VKSKRPRSIDIPASASAF 386
+K + I +P++ F
Sbjct: 384 LKRTK---IGLPSAKLDF 398
>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/345 (50%), Positives = 228/345 (66%), Gaps = 25/345 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL--FDLPSKILCRVVH 83
ELW ACAGPL+ +P+ G V Y PQGH+EQL PL +DLP + CRVV
Sbjct: 49 ELWHACAGPLISLPKRGSIVVYVPQGHLEQLP---------DLPLGIYDLPPHVFCRVVD 99
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----------TVHSFCKILT 133
++L AE +D+VYAQ++L PE+++ E + + ++ T H FCK LT
Sbjct: 100 VKLHAEAASDDVYAQVSLVPESEEIEQKLREGVFEGDGEEEDVEATVKTTTPHMFCKTLT 159
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSV R+ A +C PPLD T P+QEL AKDLHG EW+F+HI+RGQPRRHLL
Sbjct: 160 ASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLL 219
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV K+LV+GDA +FLRGE+GELR+GVRR A + + +Q ++ LA
Sbjct: 220 TTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQQLNQSSLAD 279
Query: 254 AAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A+A+ + F +YY PR +S+FII NK+L+++ FS GMR KMRFE ED+ ERR+T
Sbjct: 280 VANAISMRSAFRIYYNPRASSSEFIIPFNKFLKSLDQSFSAGMRVKMRFETEDAAERRYT 339
Query: 312 GTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
G I G+ + +WPGSKW+ L ++WD+ R RVSPWE+EP
Sbjct: 340 GLITGISELDPTRWPGSKWKCLLVRWDD-TEANRHSRVSPWEVEP 383
>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/354 (51%), Positives = 241/354 (68%), Gaps = 13/354 (3%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
+ Q GP + ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + T Q P +
Sbjct: 32 MQDQSGPRKA-INSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNY 90
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A+++TDE+YAQ++L P + + PD L +P K FC
Sbjct: 91 PNLPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIFPIPDFGL-KPSKHPSEFFC 149
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD ++ PTQEL +DLH + F+HI+RGQP+
Sbjct: 150 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPK 209
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV++KRL AGDA +F+R E +L +GVRR QQ+S+PSSV+S+ SMH+G
Sbjct: 210 RHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIG 269
Query: 250 VLATAAHAVKTSTLFIVYYKPR-------TSQFIIGLNKYLEAVHHC-FSVGMRFKMRFE 301
VLA AAHA + F ++Y PR S+F+I L KY ++V+ SVGMRF M FE
Sbjct: 270 VLAAAAHAAANRSPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFE 329
Query: 302 GEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
E+S +RR+ GTIVG+ D WPGSKWR+L+++WDE + RVS WEIE
Sbjct: 330 TEESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 383
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR--DKWAV 598
+Q + RT TKVQ G +VGR++D+ + K Y++L +E MF ++G L + W +
Sbjct: 789 QQVAPPPMRTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKL 847
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISL 656
V+ D E D++L GDD W EF V+ I I S EV+ M+ + +S EG S+
Sbjct: 848 VYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQLLNSTAIEGINDSI 905
>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
gi|224028907|gb|ACN33529.1| unknown [Zea mays]
gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
Length = 936
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 237/352 (67%), Gaps = 20/352 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + LPS++LC+V +I
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A++ETDE+YAQ+TL P +T+ P P K + FCK LTASDT
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD------VFPIPTLGAYTKSKHSSEYFCKNLTASDT 153
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 154 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 213
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L VGVRR QQ ++ SSV+S+ SMH+GVLA AAHA
Sbjct: 214 SLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHA 273
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ F VYY PRT S F+I L +Y A + SVGMRF M FE E+S +RR TGTIV
Sbjct: 274 ASSGGSFTVYYNPRTSPSPFVIPLARYNTATYLQPSVGMRFAMMFETEESSKRRCTGTIV 333
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---FVASAPLN 363
G+ D+ +WP SKWR+L+++WDE +RPERVS W+IE V S+PLN
Sbjct: 334 GISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENMVFSSPLN 385
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ G +VGR++D+T + Y +L + MF +QG+L W +V+ D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I + EV+ M+
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
protein 2; AltName: Full=OsETTIN2
gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
Length = 718
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 179/370 (48%), Positives = 234/370 (63%), Gaps = 20/370 (5%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G + ELW ACAGP+ +PR G V Y PQGH+E L A+ P +P + CR
Sbjct: 34 GAVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSG-----PGAAVPPHVFCR 88
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPD-----QCLPEP------PKQTVHSFC 129
VV + L A+ TDEVYAQ++L + ++ E R + C E P + H FC
Sbjct: 89 VVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFC 148
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A +C PPLD +L P QEL AKDLHG EWRF+HI+RGQPR
Sbjct: 149 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPR 208
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS F+ K+LV+GDA +FLRGE+GELR+GVRR A +++ P + +Q +
Sbjct: 209 RHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTS 268
Query: 250 VLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
L+ AHAV ++F +YY PR SQ FII K++ + FSVGMRFK+R+E ED+ E
Sbjct: 269 SLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASE 328
Query: 308 RRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
RR TG I+G + W GSKW+ L ++WD+ +RP VSPWEIE + + +L+ P
Sbjct: 329 RRRTGIIIGSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP 388
Query: 368 AVKSKRPRSI 377
SKR +S
Sbjct: 389 --HSKRLKSC 396
>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
Length = 936
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 236/352 (67%), Gaps = 20/352 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + LPS++LC+V +I
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A++ETDE+YAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD------VFPIPTLGAYTKSKHPSEYFCKNLTASDT 153
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 154 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 213
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L VGVRR QQ ++ SSV+S+ SMH+GVLA AAHA
Sbjct: 214 SLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHA 273
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ F VYY PRT S F+I L +Y A + SVGMRF M FE E+S +RR TGTIV
Sbjct: 274 ASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIV 333
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---FVASAPLN 363
G+ D+ +WP SKWR+L+++WDE +RPERVS W+IE V S+PLN
Sbjct: 334 GISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENMVFSSPLN 385
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ G +VGR++D+T + Y +L + MF +QG+L W +V+ D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I + EV+ M+
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
Length = 935
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 236/352 (67%), Gaps = 20/352 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + LPS++LC+V +I
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 98
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A++ETDE+YAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 99 TLHADKETDEIYAQMTLQPVHSETD------VFPIPTLGAYTKSKHPSEYFCKNLTASDT 152
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 153 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 212
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L VGVRR QQ ++ SSV+S+ SMH+GVLA AAHA
Sbjct: 213 SLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHA 272
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ F VYY PRT S F+I L +Y A + SVGMRF M FE E+S +RR TGTIV
Sbjct: 273 ASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIV 332
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---FVASAPLN 363
G+ D+ +WP SKWR+L+++WDE +RPERVS W+IE V S+PLN
Sbjct: 333 GISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENMVFSSPLN 384
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ G +VGR++D+T + Y +L + MF +QG+L W +V+ D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I + EV+ M+
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
Length = 952
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/360 (50%), Positives = 241/360 (66%), Gaps = 7/360 (1%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL LPSK++C+++ +
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDTIPSYPSLPSKLICKLLSLT 83
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+TL P + D+ + + L + KQ FCK LTASDTSTHGGF
Sbjct: 84 LHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQN-KQPTEFFCKTLTASDTSTHGGF 142
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD T+ P QEL AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL+AGD+ +F+R E +L +G+RR + Q ++ SSV+S SMH+G+LA AAHA S+
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCDSMHIGILAAAAHAAANSSP 262
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
F ++Y PR S+F+I L KY +A++ S+GMRF+M FE EDS RR+ GTI G+GD
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLD 322
Query: 322 E-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIP 380
+W S WR+L++ WDE +R RVS WEIEP VA+ P + K P+ +P
Sbjct: 323 PLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEP-VATPFYICPPPFFRPKLPKQPGMP 381
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 8/125 (6%)
Query: 515 FDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYD 574
F + D+ GMA +Q ++ RT TKVQ +G +VGR++D+T +GY+
Sbjct: 809 FKPGCSSDVAVADGGMASQGLWNSQTQR-----MRTFTKVQKRG-SVGRSIDITRYRGYE 862
Query: 575 DLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEE 632
DL +L MF IQGQL R W +V+ D E D++L GDD W EF VK I I S+ E
Sbjct: 863 DLRHDLACMFGIQGQLEDPYRTDWKLVYVDHENDILLVGDDPWEEFVSCVKSIKILSSAE 922
Query: 633 VKNMA 637
V+ M+
Sbjct: 923 VQQMS 927
>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
Length = 955
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/340 (52%), Positives = 234/340 (68%), Gaps = 17/340 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + +LPS++LC+V +I
Sbjct: 40 ELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNYPNLPSQLLCQVHNI 99
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP-------KQTVHSFCKILTASDT 137
+ A++ETDEVYAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 100 TMHADKETDEVYAQMTLQPVNSETD------VFPIPALGSYAKSKHPPEYFCKNLTASDT 153
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 154 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 213
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L +GVRR QQ+ + SSV+S+ SMH+GVLA AAHA
Sbjct: 214 SLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIGVLAAAAHA 273
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ + F +YY PRT S F++ L +Y +A + SVGMRF M FE E+S +RR+TGTIV
Sbjct: 274 ASSGSSFTIYYNPRTSPSPFVVPLARYNKANYVQQSVGMRFAMMFETEESSKRRYTGTIV 333
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
GV D+ +WP SKWR+L+++WDE +RPERVS W+IE
Sbjct: 334 GVSDYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 373
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ G +VGR++D+T + Y +L + MF +QG+L +W +V+ D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 639
++L GDD W EF V+ I I S EV+ M+ S
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMSES 942
>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
Length = 794
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/386 (48%), Positives = 250/386 (64%), Gaps = 21/386 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ STN+E+ P + L +++C++
Sbjct: 22 LNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVNGHIPNYPSLSPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P Q + D LP P KQ + FCK LTASDT
Sbjct: 82 HNVTMHADMETDEVYAQMTLQPLNQQEQK---DSYLPAELGVPSKQPTNYFCKTLTASDT 138
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD T P QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 139 STHGGFSVPRRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRHIFRGQPKRHLLTTGW 198
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 199 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHA 258
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F ++Y PR S+F+I L+KY +AV H S MRF+M FE ++S RR+ G I
Sbjct: 259 AATNSRFTIFYNPRASPSEFVIPLSKYAKAVFHTRISDDMRFRMLFETDESSVRRYMGRI 318
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
G+ D +W S WRS+K+ WDE +R RVS WEIEP + + P+ + ++ KR
Sbjct: 319 TGISDLDPVRWSNSHWRSVKVIWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 377
Query: 374 PRSIDIPA--------SASAFWYQGS 391
P +P S + W +G+
Sbjct: 378 PWHPGLPTFPDNKDDESNAFMWLRGN 403
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN+ TRT KV G +VGR++D+ Y +L +EL +
Sbjct: 642 LQNSLYGCIDESSGLLQNEGQMDPPTRTFVKVYKSG-SVGRSLDIAQFSSYHELREELGQ 700
Query: 583 MFEIQGQLRP--RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF + G+LR R W +VF D E D++L GDD W F V I I S ++V+NM
Sbjct: 701 MFGLGGKLRDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPDDVQNMG 757
>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
Length = 898
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/365 (50%), Positives = 246/365 (67%), Gaps = 20/365 (5%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV ASTN+E+ Q P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRV-----------AASTNKEVDSQIPNYPSLPPQLICQL 68
Query: 82 VHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ + A+ ETDEVYAQ+TL P + +Q +P P L P KQ + FCK LTASDTST
Sbjct: 69 HNVTMHADVETDEVYAQMTLQPLSAQEQKDPYLPAD-LGTPSKQPTNYFCKTLTASDTST 127
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD + P QEL A+DLHG EW+F+HIFRGQP+RHLLTTGWS
Sbjct: 128 HGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTTGWSV 187
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRLVAGD+ +F+ EN +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA
Sbjct: 188 FVSAKRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAA 247
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVG 316
T++ F ++Y PR S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G
Sbjct: 248 TNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITG 307
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +WP S WRS+K+ WDE ++ RVS WEIEP + + P+ + ++ KRP
Sbjct: 308 ISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEP-LTTFPMYPSSFPLRFKRPW 366
Query: 376 SIDIP 380
+P
Sbjct: 367 PTGLP 371
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ T+N + + T KV G + GR++D+T Y +L EL +F ++GQL R
Sbjct: 751 QSTENVDRVNSQSGTFVKVYKSG-SFGRSLDITRFSSYHELRSELGHLFGLEGQLEDPLR 809
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
W +VF D E D++L GDD W EF V I I S EEV+ M
Sbjct: 810 SGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPEEVQQMG 853
>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 369
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/364 (51%), Positives = 237/364 (65%), Gaps = 18/364 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL-THQEPLFDLPSKILCRVVHI 84
ELW ACAGPLV +P G +V YFPQGH EQ+ ST +E TH +L ++C + +I
Sbjct: 4 ELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTLDNI 63
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP---PKQTVHSFCKILTASDTSTHG 141
L A+ ETDEVYAQ+ L P D P LP+ KQ FCK LTASDTSTHG
Sbjct: 64 TLHADLETDEVYAQMVLIPSQD---PDKETMLLPDAVVQNKQPTEYFCKTLTASDTSTHG 120
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR-GQPRRHLLTTGWSTF 200
GFS+ R+ A + P LD P QEL A+DLH +W F+HI+R GQPRRHLLTTGWS F
Sbjct: 121 GFSIPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSVF 180
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
V++KRL AGDA +F+R + G+L +G+RR Q+ MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 181 VSAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGILAAASHAAQT 240
Query: 261 STLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGV 317
S+ F ++Y PR S+F+I L KY +AV+ +VGMRF+M FE E+S RR+ GT+ G+
Sbjct: 241 SSRFTIFYNPRQSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTVRRYMGTVTGI 300
Query: 318 GDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA---SAPLNLAQPAVKSKR 373
GD +WP S WRSLK+ WDE +R RVS WEIEP S P LA +SKR
Sbjct: 301 GDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLSCPPPLAS---RSKR 357
Query: 374 PRSI 377
R I
Sbjct: 358 ARGI 361
>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
Length = 795
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 242/361 (67%), Gaps = 13/361 (3%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E+T P + LP +++C++
Sbjct: 10 LNSELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPGLPPQLICQL 69
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P + Q + D LP P Q + FCK LTASDT
Sbjct: 70 HDVTMHADAETDEVYAQMTLQPLSPQEQK---DAFLPAELGIPTNQPTNYFCKTLTASDT 126
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + PPLD + P+QEL A+DLH EW+F+HIFRGQP+RHLLTTGW
Sbjct: 127 STHGGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 186
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV++KRLV GD+ +F+ E +L +G+RR A Q+ MP SV+SS SMH+G+LA AAHA
Sbjct: 187 SVFVSAKRLVTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGLLAAAAHA 246
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTI 314
T++ F V+Y PR S+F+I L KY++AV SVGMRF+M FE E+S RR+ GTI
Sbjct: 247 AATNSRFTVFYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSVRRYMGTI 306
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
+ D +W S WRS+K+ WDE R RVS WEIEP + + P+ + ++ KR
Sbjct: 307 TSISDLDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 365
Query: 374 P 374
P
Sbjct: 366 P 366
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
+T KV G VGR++D+ Y++L DEL +MF ++G L R W +V D E D
Sbjct: 686 QTFVKVYKSG-CVGRSLDIARFSSYNELRDELCQMFGLEGLLEDPQRSGWQLVLVDREND 744
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W F V I I S ++V+ M
Sbjct: 745 ILLMGDDPWEAFVNSVWSIKILSPQDVQQMG 775
>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
Length = 946
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 240/360 (66%), Gaps = 23/360 (6%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + LPS++LC+V +I
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 98
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP-------KQTVHSFCKILTASDT 137
L A++ETDE+YAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 99 TLHADKETDEIYAQMTLQPVHSETD------VFPIPSLGAYTKSKHPTEYFCKNLTASDT 152
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 153 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 212
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L VGVRR QQ ++ SSV+S+ SMH+GVLA AAHA
Sbjct: 213 SLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHA 272
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ F +YY PRT S F+I L +Y +A + SVGMRF M FE E+S +RR TGTIV
Sbjct: 273 ASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESIKRRCTGTIV 332
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKR 373
G+ D+ +WP SKWR+L+++WDE +RPERVS W+IE P N+ P+ + SKR
Sbjct: 333 GISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE-----TPENMVFPSPLNSKR 387
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR--DKWAVVFTDDEGD 606
RT TKVQ G +VGR++D+T + Y +L + MF +QG+L W +V+ D E D
Sbjct: 843 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGGSDWKLVYVDYEND 901
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S EV+ M+
Sbjct: 902 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 932
>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
Length = 955
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/340 (51%), Positives = 234/340 (68%), Gaps = 17/340 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + +LPS++LC+V +I
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A+++TDEVYAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD------VFPIPTLGAYTKSKHPTEYFCKNLTASDT 152
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 153 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 212
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L +GVRR QQ+ + SSV+S+ SMH+GVLA AAHA
Sbjct: 213 SLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHA 272
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ + F +YY PRT S F+I + +Y +A + SVGMRF M FE E+S +RR+TGT+V
Sbjct: 273 ASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVV 332
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
G+ D+ +WP SKWR+L+++WDE +RPERVS W+IE
Sbjct: 333 GISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ QG +VGR++D+T + Y +L + MF +QG+L +W +V+ D E D
Sbjct: 852 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S EV+ M+
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 941
>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 182/370 (49%), Positives = 240/370 (64%), Gaps = 16/370 (4%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKI 77
G + ELW ACAGPLV +P G +V YFPQGH EQ+ ST +E P + +L +
Sbjct: 31 GEKRINSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLRPHL 90
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE---PPKQTVHSFCKILTA 134
+C + ++ L A+ ETD+VYAQ+ L P D P LP+ KQ FCK LTA
Sbjct: 91 ICTLENVTLHADLETDDVYAQMVLIPTQD---PEKETMLLPDVVVQNKQPTEYFCKTLTA 147
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR-GQPRRHLL 193
SDTSTHGGFS+ R+ A + P LD T P QEL A+DLH +W F+HI+R GQPRRHLL
Sbjct: 148 SDTSTHGGFSIPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLL 207
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS F+++KRL AGDA +F+R + G+L +G+RR Q+ MPSSV+SS SMH+G+LA
Sbjct: 208 TTGWSIFISAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIGILAA 267
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRF 310
A+HA +TS+ F ++Y PR S+F+I KY +AV+ +VGMRF+M FE E+S RR+
Sbjct: 268 ASHAAQTSSRFTIFYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEESTVRRY 327
Query: 311 TGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV 369
GT+ G+GD +WP S WRSLK+ WDE +R RVS WEIEP + P + P +
Sbjct: 328 MGTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPL--TTPFLICPPPI 385
Query: 370 --KSKRPRSI 377
+SKR R I
Sbjct: 386 VLRSKRARGI 395
>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
Length = 831
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/372 (47%), Positives = 228/372 (61%), Gaps = 51/372 (13%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V YFPQGH+EQL + +DLP + CRVV ++
Sbjct: 49 ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS-------DYPAVAYDLPPHVFCRVVDVK 101
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----------TVHSFCKILTAS 135
L AE TDEVYAQ++L PET + + + ++ T H FCK LTAS
Sbjct: 102 LHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTAS 161
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG+EWRF+HI+RGQPRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTT 221
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV K+LV+GDA +FLRG +GELR+G+RR A + S P + SQ ++L L
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVV 281
Query: 256 HAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
+A+ T ++F + Y PR +S+FII L K+ +++ H FS GMRFKMR E ED+ ERR+TG
Sbjct: 282 NAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGL 341
Query: 314 IVGVGDFSE-QWPGSKWR------------------------------SLKIQWDEPATV 342
I G+ D +WPGSKWR SL+++WD+
Sbjct: 342 ITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDD-IEA 400
Query: 343 QRPERVSPWEIE 354
R RVSPWEIE
Sbjct: 401 NRHNRVSPWEIE 412
>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
Length = 832
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 188/365 (51%), Positives = 248/365 (67%), Gaps = 7/365 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + L +++C++
Sbjct: 24 LNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHTPNYPSLQPQLICQL 83
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQC-LPEPPKQTVHSFCKILTASDTSTH 140
++ + A+ ETDEVYAQ+TL P Q + S L P +Q + FCK LTASDTSTH
Sbjct: 84 HNVTMHADVETDEVYAQMTLQPLNAQEQKDSYLAAELGVPSRQPTNYFCKTLTASDTSTH 143
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R+ A + PPLD T P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 144 GGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVF 203
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
V++KRLVAGD+ +F+ + +L +G+RR Q+ MPSSV+SS SMHLG+LA AAHA T
Sbjct: 204 VSAKRLVAGDSVLFIWNDKNQLLLGIRRAHRPQTVMPSSVLSSDSMHLGLLAAAAHAAPT 263
Query: 261 STLFIVYYKPR--TSQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F ++Y PR TS+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G+
Sbjct: 264 NSRFTIFYNPRASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGI 323
Query: 318 GDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
D +W S WRS+K+ WDE R RVS WEIEP + + P+ + ++ KRP
Sbjct: 324 CDLDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEIEP-LTTFPMYPSPFPLRLKRPWP 382
Query: 377 IDIPA 381
+P+
Sbjct: 383 SGLPS 387
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
+ T KV G + GR++D+T Y++L EL +MF ++GQL R W +VF E
Sbjct: 704 SNTFVKVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGQLEDPVRSGWQLVFVGRE- 761
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
EF V I I S +EV+ M
Sbjct: 762 -----------EFVSSVWCIKILSPQEVQQMG 782
>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 728
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/362 (48%), Positives = 230/362 (63%), Gaps = 22/362 (6%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V Y PQGH E ++ FD+P + CRV+ ++
Sbjct: 44 ELWHACAGPLISLPKRGSVVVYLPQGHFEHVQDFPVNA-------FDIPPHVFCRVLDVK 96
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----------TVHSFCKILTAS 135
L AE+ +DEVY Q+ L PE++Q E + + ++ T H FCK LTAS
Sbjct: 97 LHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTPHMFCKTLTAS 156
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 157 DTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTT 216
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV K+LV+GDA +FLRG +GELR+G+RR A + + +V S Q ++ L
Sbjct: 217 GWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVPSGQQLNPATLMDVV 276
Query: 256 HAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
+A+ T F V Y PR + FII ++K+LE++ +SVGMRF+MRFE ED+ +RRFTG
Sbjct: 277 NALSTRCAFSVCYNPRYFSXXFIIPVHKFLESLDCSYSVGMRFRMRFETEDAADRRFTGL 336
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF-VASAPLNLAQPAVKS 371
I G+ D +WPGSKWR L ++WD+ R RVSPWEIEP AS NL +K
Sbjct: 337 IAGISDVDPVRWPGSKWRCLLVRWDD-IEAARHNRVSPWEIEPSGSASNSSNLMAAGLKR 395
Query: 372 KR 373
R
Sbjct: 396 NR 397
>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
Length = 682
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/372 (47%), Positives = 232/372 (62%), Gaps = 25/372 (6%)
Query: 18 PGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL--FDLPS 75
P G + ELW ACAGPL+ +P+ G V Y PQGH EQ H P+ ++P
Sbjct: 45 PPQGSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQ---------AHDFPVSACNIPP 95
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----------TV 125
+ CRV+ ++L AE+ +DEVY Q+ L PE Q E + + ++ T
Sbjct: 96 HVFCRVLDVKLHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKSTTP 155
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EWRF+HI+R
Sbjct: 156 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRHIYR 215
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQPRRHLLTTGWS FV K+LV+GDA +FLRGE+GELR+G+RR +SS +S
Sbjct: 216 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGLSGMQ 275
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGE 303
+ G L +A+ + F V Y PR +S+FII +NK+L+++ +S GMRF+MRFE E
Sbjct: 276 LDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETE 335
Query: 304 DSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF-VASAP 361
D+ ERRFTG I G+ D +WPGSKW+ L ++WD+ + RVSPWEIEP AS
Sbjct: 336 DAAERRFTGLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSASNS 395
Query: 362 LNLAQPAVKSKR 373
NL ++K R
Sbjct: 396 SNLMAASLKRTR 407
>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
Length = 945
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/352 (51%), Positives = 234/352 (66%), Gaps = 20/352 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + LP ++LC+V +I
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQVHNI 98
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A++ETDE+Y Q+TL P +T+ P P K FCK LTASDT
Sbjct: 99 TLHADKETDEIYCQMTLQPLHSETD------VFPIPTLGAYTKSKHPTEYFCKNLTASDT 152
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 153 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 212
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L VGVRR QQ ++ SSV+S+ SMH+GVLA AAHA
Sbjct: 213 SLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHA 272
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ F +YY PRT S F+I L +Y +A + SVGMRF M FE E+S +RR TG IV
Sbjct: 273 ASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESSKRRCTGAIV 332
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---FVASAPLN 363
G+ D+ +WP SKWR+L+++WDE +RPERVS W+IE V S+PLN
Sbjct: 333 GISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENMVFSSPLN 384
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTDDEGD 606
RT TKVQ G +VGR +D+T + Y +L + MF +QG+L W +V+ D E D
Sbjct: 842 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 900
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S EV+ M+
Sbjct: 901 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 931
>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
Length = 1084
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 236/350 (67%), Gaps = 9/350 (2%)
Query: 16 GGPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
G G G+ + ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +
Sbjct: 10 AGSGEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETECVPSYPN 69
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCK 130
LPSK++C + ++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q V FCK
Sbjct: 70 LPSKLICMLHNVTLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQS-RQPVEFFCK 128
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A + PPLD ++ P QE+ A+DLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKR 188
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV++KRL AGD+ +F+R E +L +G+RR QQ ++ SSVIS SMH+G+
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGI 248
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LA AAHA ++ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE E+S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 309 RFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
R+ GTI G+ + + +W S+WR+L++ WDE +RP RVS WEIEP V
Sbjct: 309 RYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTD 602
A RT TKVQ +G +VGR++D+T KGYD+L +L +MF I+GQL R W +V+ D
Sbjct: 953 AQRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVD 1011
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
E D++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1012 HENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1046
>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 736
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/367 (48%), Positives = 232/367 (63%), Gaps = 32/367 (8%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V Y PQGH E ++ +D+P + CRV+ ++
Sbjct: 53 ELWHACAGPLISLPKKGSVVVYLPQGHFEHVQ-------DFPVTAYDIPPHVFCRVLDVK 105
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP---------------PKQTVHSFCK 130
L AE+ +DEVY Q+ L PE++Q E Q L E T H FCK
Sbjct: 106 LHAEEGSDEVYCQVLLVPESEQVE-----QSLREGEIVADGEEEDTEAIVKSTTPHMFCK 160
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EWRF+HI+RGQPRR
Sbjct: 161 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRR 220
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV K+LV+GDA +FLRG++GELR+G+RR A +S+ +V S Q ++
Sbjct: 221 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPAT 280
Query: 251 LATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
L +A+ T F V Y PR +S+FII ++K+L+++ +SVGMRF+MRFE ED+ ER
Sbjct: 281 LKGVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAER 340
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF-VASAPLNLAQ 366
R TG I G+ D +W GSKWR L ++WD+ +R RVSPWEIEP AS NL
Sbjct: 341 RCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAARR-NRVSPWEIEPSGSASNSSNLMS 399
Query: 367 PAVKSKR 373
+K R
Sbjct: 400 AGLKRTR 406
>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
Length = 608
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/384 (46%), Positives = 239/384 (62%), Gaps = 33/384 (8%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G + ELW ACAGPL+ +P+ G V YFPQGH+EQ ++ LP + CR
Sbjct: 49 GGVCLELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCR 101
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP--------EPPKQ--TVHSFCK 130
++ ++L AE TDEVYAQ++L PE++ E + + + E K+ T H FCK
Sbjct: 102 ILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCK 161
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A +C PPLD + P+QEL A+DLHG EWRF+HI+RGQPRR
Sbjct: 162 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRR 221
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV K+LV+GDA +FLRG++G+LR+GVRR + + + S +Q+M+
Sbjct: 222 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNN 281
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
+ AHA+ T ++F + Y P+ S FII K+L+ V + F +GMRFK R E ED+ ER
Sbjct: 282 FSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASER 341
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---------FVA 358
R G I G+ D +WPGSKWR L ++WD+ +RVSPWEIEP FV
Sbjct: 342 RSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVT 401
Query: 359 SAPLNLAQPAVKSKRPRSIDIPAS 382
+ P ++ + S +P DIP S
Sbjct: 402 TGP-KRSRIGISSGKP---DIPVS 421
>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
Length = 714
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 176/364 (48%), Positives = 231/364 (63%), Gaps = 15/364 (4%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G + ELW ACAGP+ +PR G V Y PQGH+E L A+ P + CR
Sbjct: 34 GAVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGPAAVAAVP-----PHVFCR 88
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPD------QCLPEPPKQTVHSFCKILTA 134
VV + L A+ TDEVYAQ++L + ++ E R + + + P + H FCK LTA
Sbjct: 89 VVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARIPHMFCKTLTA 148
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD +L P+QEL AKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 149 SDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLT 208
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS F+ K+LV+GDA +FLRGE+GELR+GVRR A ++ P + +Q L+
Sbjct: 209 TGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQISSTSSLSEV 268
Query: 255 AHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
AHAV ++F +YY PR SQ FII K++ + FSVGMRFK+R+E ED+ ERR TG
Sbjct: 269 AHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTG 328
Query: 313 TIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I+G + W GSKW+ L ++WD+ +RP VSPWEIE + + +L+ P SK
Sbjct: 329 IIIGSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP--HSK 386
Query: 373 RPRS 376
R +S
Sbjct: 387 RLKS 390
>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
Length = 605
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 178/383 (46%), Positives = 238/383 (62%), Gaps = 34/383 (8%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V YFPQGH+EQ ++ LP + CR++ ++
Sbjct: 52 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 104
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLP--------EPPKQT--VHSFCKILTAS 135
L AE TDEVYAQ++L PE++ E + + + E K+T H FCK LTAS
Sbjct: 105 LHAETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPHMFCKTLTAS 164
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSV R+ A +C PPLD T P+QEL A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 165 DTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 224
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV K+LV+GDA +FLRG++G+LR+GVRR + + + S +Q+M+ A
Sbjct: 225 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNNFAEVV 284
Query: 256 HAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
HA+ T++ F +YY P+ S FII K+L+ V + F +GMRFK R E ED+ ERR G
Sbjct: 285 HAISTNSAFNIYYNPKASWSNFIIPAPKFLKTVDYPFCIGMRFKARVESEDASERRSPGI 344
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEP-ATVQRPERVSPWEIEP---------FVASAPL 362
I G+ D +WPGSKWR L ++WD+ A +R+SPWEIEP F+ + P
Sbjct: 345 ITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEPSGSISSSGSFITTGP- 403
Query: 363 NLAQPAVKSKRPRSIDIPASASA 385
++ S +P DIP S S
Sbjct: 404 KRSRIGFSSGKP---DIPVSGSG 423
>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 236/350 (67%), Gaps = 9/350 (2%)
Query: 16 GGPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
G G G+ + ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +
Sbjct: 10 AGSGEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETECVPSYPN 69
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCK 130
LPSK++C + ++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q V FCK
Sbjct: 70 LPSKLICMLHNVTLHADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQS-RQPVEFFCK 128
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A + PPLD ++ P QE+ A+DLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKR 188
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV++KRL AGD+ +F+R E +L +G+RR QQ ++ SSVIS SMH+G+
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGI 248
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LA AAHA ++ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE E+S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 309 RFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
R+ GTI G+ + + +W S+WR+L++ WDE +RP RVS WEIEP V
Sbjct: 309 RYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTD 602
A RT TKVQ +G +VGR++D+T KGYD+L +L +MF I+GQL R W +V+ D
Sbjct: 747 AQRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVD 805
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
E D++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 806 HENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 840
>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 227/362 (62%), Gaps = 15/362 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP+ +PR G V Y PQGH++ L P +P + CRVV +
Sbjct: 68 ELWHACAGPVAPMPRKGSVVVYLPQGHLDHL--GDAPAHAAASPAAAVPPHVFCRVVDVT 125
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR---SPDQCLPEPPKQTV--------HSFCKILTA 134
L A+ TDEVYAQ++L PE ++ R + D +TV H FCK LTA
Sbjct: 126 LHADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRFARMPHMFCKTLTA 185
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFS R+ A +C P LD P+QEL AKDLHG EW+F+HI+RGQPRRHLLT
Sbjct: 186 SDTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLT 245
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS FV K+LV+GDA +FLRG++GELR+GVRR ++ + SQ +LG LA
Sbjct: 246 TGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANV 305
Query: 255 AHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
HAV T ++F ++Y PR SQ FI+ K+ +++ FSVG RFKMR+E ED+ ERR+TG
Sbjct: 306 THAVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTG 365
Query: 313 TIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
I G D +W GSKW+ L ++WD+ +RP R+SPWEIE A++ +LA P K
Sbjct: 366 IITGTVDADPRWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIELTSAASGSHLAAPTSKRM 425
Query: 373 RP 374
+P
Sbjct: 426 KP 427
>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
Length = 935
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/352 (52%), Positives = 235/352 (66%), Gaps = 21/352 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + LPS++LC+V +I
Sbjct: 40 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQVHNI 99
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A++ETDE+YAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 100 TLHADKETDEIYAQMTLQPVHSETD------VFPIPTLGAYTKSKHPSEYFCKNLTASDT 153
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+R QP+RHLLTTGW
Sbjct: 154 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKRHLLTTGW 212
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L VGVRR QQ ++ SSV+S+ SMH+GVLA AAHA
Sbjct: 213 SLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHA 272
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ F VYY PRT S F+I L +Y A + SVGMRF M FE E+S +RR TGTIV
Sbjct: 273 ASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIV 332
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---FVASAPLN 363
G+ D+ +WP SKWR+L+++WDE +RPERVS W+IE V S+PLN
Sbjct: 333 GISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENMVFSSPLN 384
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ G +VGR++D+T + Y +L + MF +QG+L W +V+ D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I + EV+ M+
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 608
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/384 (46%), Positives = 238/384 (61%), Gaps = 33/384 (8%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G + ELW ACAGPL+ +P+ G V YFPQGH+EQ ++ LP + CR
Sbjct: 49 GGVCLELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCR 101
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP--------EPPKQ--TVHSFCK 130
++ ++L AE TDEVYAQ++L PE++ E + + + E K+ T H FCK
Sbjct: 102 ILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCK 161
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A +C PPLD + P+QEL A+DLHG EWRF+HI+RGQPRR
Sbjct: 162 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRR 221
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV K+LV+GDA +FLRG++G+LR+GVRR + + + S +Q+M+
Sbjct: 222 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNN 281
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
+ AHA+ T ++F + Y P+ S FII K+L+ V + F +GMRFK R E ED+ ER
Sbjct: 282 FSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASER 341
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---------FVA 358
R G I G+ D +WPGSKWR L ++WD+ +RVSPWEIEP FV
Sbjct: 342 RSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVT 401
Query: 359 SAPLNLAQPAVKSKRPRSIDIPAS 382
+ P ++ S +P DIP S
Sbjct: 402 TGP-KRSRIGFSSGKP---DIPVS 421
>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
Length = 608
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/384 (46%), Positives = 238/384 (61%), Gaps = 33/384 (8%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G + ELW ACAGPL+ +P+ G V YFPQGH+EQ ++ LP + CR
Sbjct: 49 GGVCLELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCR 101
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP--------EPPKQ--TVHSFCK 130
++ ++L AE TDEVYAQ++L PE++ E + + + E K+ T H FCK
Sbjct: 102 ILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCK 161
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A +C PPLD + P+QEL A+DLHG EWRF+HI+RGQPRR
Sbjct: 162 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRR 221
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV K+LV+GDA +FLRG++G+LR+GVRR + + + S +Q+M+
Sbjct: 222 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNN 281
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
+ AHA+ T ++F + Y P+ S FII K+L+ V + F +GMRFK R E ED+ ER
Sbjct: 282 FSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASER 341
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---------FVA 358
R G I G+ D +WPGSKWR L ++WD+ +RVSPWEIEP FV
Sbjct: 342 RSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVT 401
Query: 359 SAPLNLAQPAVKSKRPRSIDIPAS 382
+ P ++ S +P DIP S
Sbjct: 402 TGP-KRSRIGFSSGKP---DIPVS 421
>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
Length = 1055
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 247/372 (66%), Gaps = 10/372 (2%)
Query: 17 GPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
PG G+ + ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL + L
Sbjct: 12 APGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSL 71
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
PSK++C+++ + L A+ ETDEVYAQ+TL P + D+ + + L + KQ FCK
Sbjct: 72 PSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQN-KQPAEFFCKT 130
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A + PPLD T+ P QEL AKDLH W+F+HI+RGQP+RH
Sbjct: 131 LTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRH 190
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV++KRL+AGD+ +F+R E +L +G+RR Q ++ SSV+SS SMH+G+L
Sbjct: 191 LLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGIL 250
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
A AAHA S+ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE EDS RR
Sbjct: 251 AAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRR 310
Query: 310 FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
+ GTI G+GD +W S WR+L++ WDE +R RVS WEIEP VA+ P
Sbjct: 311 YMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEP-VATPFYICPPPF 369
Query: 369 VKSKRPRSIDIP 380
+ K P+ +P
Sbjct: 370 FRPKLPKQPGMP 381
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T + YD+L +L MF IQGQL R W +V+ D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S EV+ M+
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
Length = 1055
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 184/372 (49%), Positives = 246/372 (66%), Gaps = 10/372 (2%)
Query: 17 GPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
PG G+ + ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL + L
Sbjct: 12 APGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSL 71
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
PSK++C+++ + L A+ ETDEVY Q+TL P + D+ + + L + KQ FCK
Sbjct: 72 PSKLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQN-KQPAEFFCKT 130
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A + PPLD T+ P QEL AKDLH W+F+HI+RGQP+RH
Sbjct: 131 LTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRH 190
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV++KRL+AGD+ +F+R E +L +G+RR Q ++ SSV+SS SMH+G+L
Sbjct: 191 LLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGIL 250
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
A AAHA S+ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE EDS RR
Sbjct: 251 AAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRR 310
Query: 310 FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
+ GTI G+GD +W S WR+L++ WDE +R RVS WEIEP VA+ P
Sbjct: 311 YMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEP-VATPFYICPPPF 369
Query: 369 VKSKRPRSIDIP 380
+ K P+ +P
Sbjct: 370 FRPKLPKQPGMP 381
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T + YD+L +L MF IQGQL R W +V+ D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S EV+ M+
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
Length = 1063
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 246/372 (66%), Gaps = 10/372 (2%)
Query: 17 GPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
GP G+ + ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E+ L
Sbjct: 12 GPPEGEKKAINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVDVIPNYPSL 71
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
PSK++C+++ + L A+ ETDEVYAQ+TL P + D+ + + L + KQ + FCK
Sbjct: 72 PSKLICKLLSLTLHADSETDEVYAQMTLQPVSKYDRDAMLASELGLKQN-KQPMEFFCKT 130
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A + PPLD + P QEL AKDLH W+F+HIFRGQP+RH
Sbjct: 131 LTASDTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRH 190
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV++KRL+AGD+ +F+R E +L +G+RR Q ++ SSV+SS SMH+G+L
Sbjct: 191 LLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSDSMHIGIL 250
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
A AAHA S+ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE EDS RR
Sbjct: 251 AAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRR 310
Query: 310 FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
+ GTI G+GD +W S WR+L++ WDE +R RVS WEIEP VA+ P
Sbjct: 311 YMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEP-VATPFYICPPPF 369
Query: 369 VKSKRPRSIDIP 380
+ K P+ +P
Sbjct: 370 FRPKLPKQPGMP 381
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T + YD+L +L MF IQGQL R W +V+ D E D
Sbjct: 947 RTFTKVQKRG-SVGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 1005
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S+ EV+ M+
Sbjct: 1006 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1036
>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
Length = 747
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/389 (45%), Positives = 236/389 (60%), Gaps = 25/389 (6%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L+S P + ELW ACAGPL+ +P+ G V Y PQGH+E L +
Sbjct: 41 LTSSTTPAVASVCMELWHACAGPLISLPKKGSAVVYLPQGHLEHLSE-------YPSIAC 93
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-------- 123
+LP + CRVV ++L A+ TDEVYAQ++L P+ Q E + D + ++
Sbjct: 94 NLPPHVFCRVVDVKLQADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGK 153
Query: 124 --TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
T H FCK LTASDTSTHGGFSV R+ A +C PLD P+QEL AKDLHG EW+F+
Sbjct: 154 SITPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFR 213
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQPRRHLLTTGWS FV K+LV+GDA +FLR +GELR+GVRR A ++
Sbjct: 214 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSSYLAP 273
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMR 299
S+ +++ + A + + + F + Y PR +S FI+ +K+ + + H FS GMRFKMR
Sbjct: 274 CSKPLNVSGIVDAVNVISSRNAFNICYNPRDSSSDFIVPYHKFSKTLAHPFSAGMRFKMR 333
Query: 300 FEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF-V 357
E ED+ E+RFTG +VGV + +WPGSKWR L ++WD+ V R RVSPWEIEP
Sbjct: 334 VETEDAAEQRFTGLVVGVSNVDPVRWPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEPSGS 392
Query: 358 ASAPLNLAQPAVKSKRPRSIDIPASASAF 386
A P +L P+ K R + P S + F
Sbjct: 393 APVPSSLVMPSAKRTR---VGFPISKADF 418
>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/376 (49%), Positives = 248/376 (65%), Gaps = 10/376 (2%)
Query: 17 GPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
GP G+ + ELW AC+GPLV +P G V YFPQGH EQ+ AS ++E+ L
Sbjct: 12 GPPEGEKKAINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVDIIPNYPSL 71
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
PSK++C+++ + L A+ ETDEVYAQ+TL P + D+ + + L + KQ V FCK
Sbjct: 72 PSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQN-KQPVEFFCKT 130
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A + PPLD T+ P QEL AKDLH W+F+HIFRGQP+RH
Sbjct: 131 LTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKRH 190
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV++KRL+AGD+ +F+R E +L +G+RR Q ++ SSV+SS SMH+G+L
Sbjct: 191 LLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGIL 250
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
A AAHA S+ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE EDS RR
Sbjct: 251 AAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRR 310
Query: 310 FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
+ GTI G+GD +W S WR+L++ WDE +R RVS WEIEP VA+ P
Sbjct: 311 YMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEP-VATPFYICPPPF 369
Query: 369 VKSKRPRSIDIPASAS 384
+ K P+ +P S
Sbjct: 370 FRPKLPKQPGMPDDES 385
>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
Length = 961
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/340 (53%), Positives = 235/340 (69%), Gaps = 10/340 (2%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE--LTHQEPLF-DLPSKILCRVVH 83
LW CAGPLV +P G V YFPQGH EQ+ AST Q+ + + P + +LP+ ++C + +
Sbjct: 16 LWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPNLPAHLICHLHN 75
Query: 84 IELLAEQETDEVYAQITLHPETDQTEP-RSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L A+ +TDEVYAQ+TL P + EP +PD L PKQ SFCK LTASDTSTHGG
Sbjct: 76 ITLHADPDTDEVYAQMTLQPVQNDKEPFLTPD--LGIQPKQQTLSFCKTLTASDTSTHGG 133
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FS+ R+ A + PPLD T P QEL AKDLH +W F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 134 FSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVS 193
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
+KRL AGD +F+R EN L +G+RR QQ+++PSS++SS SM +GVLA AAHA T++
Sbjct: 194 AKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNS 253
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
F ++Y PR S+F++ ++ +A +H +VGMRF+M E EDS RR+ GTI G+GD
Sbjct: 254 RFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRYMGTITGIGD 313
Query: 320 F-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
S +WP S WR+LK+ WDE QR +RVS WEIEP A
Sbjct: 314 LDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLTA 353
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL---RPRDKWAVVFTDDEG 605
RT TKV + +VGR++D+T LK Y++L ++ +MF ++GQL R W +VF D EG
Sbjct: 825 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 884
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
D++L GDD W EF V+ I I S EV+ +
Sbjct: 885 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQL 915
>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
Length = 958
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 181/340 (53%), Positives = 233/340 (68%), Gaps = 10/340 (2%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE--LTHQEPLF-DLPSKILCRVVH 83
LW CAGPLV +P G V YFPQGH EQ+ AST Q+ + + P + LP+ ++C + +
Sbjct: 16 LWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPSLPAHLICHLHN 75
Query: 84 IELLAEQETDEVYAQITLHPETDQTEP-RSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L A+ +TDEVYAQ+TL P + EP +PD L PKQ SFCK LTASDTSTHGG
Sbjct: 76 ITLHADPDTDEVYAQMTLQPVQNDKEPFLTPD--LGIQPKQQTLSFCKTLTASDTSTHGG 133
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FS+ R+ A + PPLD T P QEL AKDLH +W F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 134 FSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVS 193
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
+KRL AGD +F+R EN L +G+RR QQ+++PSS++SS SM +GVLA AAHA T++
Sbjct: 194 AKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNS 253
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
F ++Y PR S+F++ ++ +A +H +VGMRF+M E EDS RR+ GTI G+GD
Sbjct: 254 RFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRYMGTITGIGD 313
Query: 320 F-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
S +WP S WR+LK+ WDE QR RVS WEIEP A
Sbjct: 314 LDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLTA 353
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL---RPRDKWAVVFTDDEG 605
RT TKV + +VGR++D+T LK Y++L ++ +MF ++GQL R W +VF D EG
Sbjct: 822 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 881
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
D++L GDD W EF V+ I I S EV+ +
Sbjct: 882 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQL 912
>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
Length = 1099
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 190/381 (49%), Positives = 251/381 (65%), Gaps = 22/381 (5%)
Query: 9 GCSLSSQGG--PGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTH 66
GC LS G P + ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++
Sbjct: 9 GC-LSDDAGEAPERRHINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKRDVDA 67
Query: 67 QEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCL----PE 119
Q P + +LPSK+LC + ++ L A+ ETDEVYAQ+TL P + D+ D L P+
Sbjct: 68 QIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVSSFDKEALLRSDLSLKSNKPQ 127
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
P FCK LTASDTSTHGGFSV R+ A + PPLD ++ TP QEL A+DLH W+
Sbjct: 128 P-----EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQTPAQELVARDLHENVWK 182
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
F+HI+RG+P+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SS
Sbjct: 183 FRHIYRGKPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDETQQLLLGIRRANRQPANLSSS 242
Query: 240 VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRF 296
V+SS SMH+G+LA AAHA ++ F V+Y PR S+F+I L KY +AV+ H S GMRF
Sbjct: 243 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASLSEFVIPLAKYYKAVYNHQISPGMRF 302
Query: 297 KMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
+M FE E+S RR+ GTI G+ D +W S+WR+L++ WDE +R RVS WEIEP
Sbjct: 303 RMMFETEESGTRRYMGTITGISDIDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEP 362
Query: 356 FVASAPLNLA-QPAVKSKRPR 375
+AP + P +SKRPR
Sbjct: 363 --VTAPFFICPSPLFRSKRPR 381
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GYD+L +L + F I+GQL R + W +V+ D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWKLVYVDHEND 1045
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1046 VLLVGDDPWEEFINCVRCIKILSPQEVQQMS 1076
>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
Length = 697
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 221/353 (62%), Gaps = 30/353 (8%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G + ELW ACAGP+ +PR G V Y PQGH+E + + + +P + CR
Sbjct: 25 GAVCLELWHACAGPVGPLPRKGSAVVYLPQGHLEHIGDAGSAAAK-------VPPHVFCR 77
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPD-----------------QCLPEPPKQ 123
VV + L A+ TDEVYAQ+TL + ++++ R D + LP P
Sbjct: 78 VVDVNLQADAATDEVYAQVTLAVDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIP-- 135
Query: 124 TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHI 183
H FCK LTASDTSTHGGFSV R+ A +C PPLD +L P+QEL AKDLHG EWRF+HI
Sbjct: 136 --HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHI 193
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISS 243
+RGQPRRHLLTTGWS FV K+LV+GDA +FLRGE+GELR+GVRR+A ++ P +
Sbjct: 194 YRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPFPAPHN 253
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFE 301
Q L AHA+ + F VYY PR S+FII K++ +V FS GMRFKMR+E
Sbjct: 254 QDPGHSSLGNVAHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSVGQPFSAGMRFKMRYE 313
Query: 302 GEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
ED+ ERR TG I+G + + GSKW+ L ++WD+ +RP RVSPW+IE
Sbjct: 314 NEDASERRSTGIIIGSRESDPKSYGSKWKCLVVRWDDDIEGRRPNRVSPWDIE 366
>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 159/291 (54%), Positives = 217/291 (74%), Gaps = 4/291 (1%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
LY ELW ACAGPLV VPR G++V+YFPQGH+EQ+ A N++ P++DLP KILC+VV
Sbjct: 1 LYTELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIYDLPYKILCKVV 60
Query: 83 HIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
H++L AE +TDEV+A ITL P E D+ + L K V SF K LT SDTST
Sbjct: 61 HVQLKAEAKTDEVFAHITLLPVAEGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDTSTQ 120
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV ++HA E LPPLD + P QEL AKDLHG EWRF+HI+RGQP+RHLLT GWSTF
Sbjct: 121 GGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGWSTF 180
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
++SKR+VAGD+F+FLRGE+GELRVGVRR ++++ ++V+++ SM LG+L++A+HA+ T
Sbjct: 181 ISSKRVVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGILSSASHAIST 240
Query: 261 STLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
++F +++ P TS +FII ++Y+++ +S+G RF M+FEGE+ E+R
Sbjct: 241 GSIFTIFFHPWTSPAEFIIPFDQYMKSAEIEYSIGTRFIMQFEGEECTEQR 291
>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 955
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 176/337 (52%), Positives = 233/337 (69%), Gaps = 9/337 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + LPS++LC+V +I
Sbjct: 44 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNYPSLPSQLLCQVHNI 103
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--PPKQTVHSFCKILTASDTSTHGG 142
+ A+++TDEVYAQ+TL P +T+ P Q L K FCK LTASDTSTHGG
Sbjct: 104 TMHADKDTDEVYAQMTLQPVNSETD-VFPIQSLGSYAKSKHPAEYFCKNLTASDTSTHGG 162
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 163 FSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVG 222
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
+KRL AGD+ +F+R E +L VGVRR +QQ+++ SSV+S+ SMH+GVLA AAHA + +
Sbjct: 223 AKRLKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIGVLAAAAHAASSGS 282
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
F +YY PRT S F++ + +Y +A++ SVGMR M E E+S +RR TGTIVGV D
Sbjct: 283 SFTIYYNPRTSPSPFVVPMTRYNKAIYIQQSVGMRIAMMSETEESGKRRHTGTIVGVSDS 342
Query: 321 SE-QWPGSKWRSLKIQWD--EPATVQRPERVSPWEIE 354
+WP SKWR+L+++WD E +RPERVS W+IE
Sbjct: 343 DPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIE 379
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTDDEGD 606
RT TKVQ G +VGR++D+T + Y +L + MF +QG+L W +V+ D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPASSDWKLVYVDYEND 909
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S EV+ M+
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
Length = 958
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 234/365 (64%), Gaps = 33/365 (9%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + LP ++LC+V +I
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQVHNI 98
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A++ETDE+Y Q+TL P +T+ P P K FCK LTASDT
Sbjct: 99 TLHADKETDEIYCQMTLQPLHSETD------VFPIPTLGAYTKSKHPTEYFCKNLTASDT 152
Query: 138 STHGGFSVLRKHATECLP-------------PLDMTLATPTQELAAKDLHGYEWRFKHIF 184
STHGGFSV R+ A + P P D ++ P QEL +DLH W F+HI+
Sbjct: 153 STHGGFSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNMWTFRHIY 212
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ 244
RGQP+RHLLTTGWS FV +KRL AGD+ +F+R E +L VGVRR QQ ++ SSV+S+
Sbjct: 213 RGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTD 272
Query: 245 SMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
SMH+GVLA AAHA + F +YY PRT S F+I L +Y +A + SVGMRF M FE
Sbjct: 273 SMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFET 332
Query: 303 EDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---FVA 358
E+S +RR TG IVG+ D+ +WP SKWR+L+++WDE +RPERVS W+IE V
Sbjct: 333 EESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENMVF 392
Query: 359 SAPLN 363
S+PLN
Sbjct: 393 SSPLN 397
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ G +VGR +D+T + Y +L + MF +QG+L W +V+ D E D
Sbjct: 855 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 913
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S EV+ M+
Sbjct: 914 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 944
>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
Length = 1053
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/360 (50%), Positives = 241/360 (66%), Gaps = 7/360 (1%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL LPSK++C+++ +
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDTVPSYPSLPSKLICKLLSLT 83
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+ L P + D+ + + L + KQ FCK LTASDTSTHGGF
Sbjct: 84 LHADSETDEVYAQMMLQPVNKYDRDAMLASELGLKQN-KQPTEFFCKTLTASDTSTHGGF 142
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD T+ P QEL AKDLH W+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 143 SVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVST 202
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL+AGD+ +F+R E +L +G+RR + Q ++ SSV+SS SMH+G+LA AAHA S+
Sbjct: 203 KRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSSDSMHIGILAAAAHAAANSSP 262
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
F ++Y PR S+F+I L KY +A++ S+GMRF+M FE EDS RR+ GTI G+GD
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLD 322
Query: 322 E-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIP 380
+W S WR+L++ WDE +R RVS WEIEP VA+ P + K P+ +P
Sbjct: 323 PLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEP-VATPFYICPPPFFRPKLPKQAGMP 381
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T +GY+DL +L MF IQGQL R W +V+ D E D
Sbjct: 939 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 997
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S+ EV+ M+
Sbjct: 998 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1028
>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
Length = 1107
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/385 (49%), Positives = 252/385 (65%), Gaps = 19/385 (4%)
Query: 13 SSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF- 71
S++GG + ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P +
Sbjct: 17 SNEGGLEKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYP 76
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCL----PEPPKQTV 125
L SK+LC + ++ L A+ ETDEVYAQ+TL P D+ D L P+P
Sbjct: 77 SLASKLLCLLHNVTLHADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQP----- 131
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL AKDLH W F+HI+R
Sbjct: 132 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYR 191
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E +L +G+RR Q +++ SSV+SS S
Sbjct: 192 GQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDS 251
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEG 302
MH+G+LA AAHA ++ F V+Y PR S+F+I L KY +AV + S+GMRF+M FE
Sbjct: 252 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFET 311
Query: 303 EDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
E+S RR+ GTI G+ D +W GS+WR+L++ WDE +R RVS WEIEP + AP
Sbjct: 312 EESGTRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVI--AP 369
Query: 362 LNLAQPA-VKSKRPRSIDIPASASA 385
+ P ++SKRPR +P S+
Sbjct: 370 FFICPPPFLRSKRPRQPGMPDDDSS 394
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L +L + F I+GQL R K W +V+ D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W +F V+ I I S +EV+ M+
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
Length = 1107
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/385 (49%), Positives = 252/385 (65%), Gaps = 19/385 (4%)
Query: 13 SSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF- 71
S++GG + ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P +
Sbjct: 17 SNEGGLEKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYP 76
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCL----PEPPKQTV 125
L SK+LC + ++ L A+ ETDEVYAQ+TL P D+ D L P+P
Sbjct: 77 SLASKLLCLLHNVTLHADPETDEVYAQMTLLPVLSFDKDALLRSDLALKSNKPQP----- 131
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL AKDLH W F+HI+R
Sbjct: 132 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYR 191
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E +L +G+RR Q +++ SSV+SS S
Sbjct: 192 GQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDS 251
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEG 302
MH+G+LA AAHA ++ F V+Y PR S+F+I L KY +AV + S+GMRF+M FE
Sbjct: 252 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFET 311
Query: 303 EDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
E+S RR+ GTI G+ D +W GS+WR+L++ WDE +R RVS WEIEP + AP
Sbjct: 312 EESGTRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVI--AP 369
Query: 362 LNLAQPA-VKSKRPRSIDIPASASA 385
+ P ++SKRPR +P S+
Sbjct: 370 FFICPPPFLRSKRPRQPGMPDDDSS 394
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L +L + F I+GQL R K W +V+ D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W +F V+ I I S +EV+ M+
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1097
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/341 (51%), Positives = 236/341 (69%), Gaps = 6/341 (1%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E +LPSK++C +
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICML 78
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + ++ + D L + +Q FCK LTASDTST
Sbjct: 79 HNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQS-RQPAEFFCKTLTASDTST 137
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSV 197
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R E +L +G+RR QQ ++ SSVISS SMH+G+LA+AAHA
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 257
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE E+S RR+ GTI G+
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317
Query: 318 GDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
D S +W S+WR+L++ WDE A +RP RVS WE+EP V
Sbjct: 318 SDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 358
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR +D+T KGYD+L +L +MF I+GQL R W +V+ D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
gi|224033653|gb|ACN35902.1| unknown [Zea mays]
gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
Length = 708
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/407 (43%), Positives = 237/407 (58%), Gaps = 28/407 (6%)
Query: 17 GPGS-GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
GPG G + ELW ACAGP+ +PR G V Y PQGH+E + + +P
Sbjct: 24 GPGGRGAVCLELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASA----VPP 79
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQC---------------LPEP 120
+LCRVV + L A+ TDEVYA+++L PE + E R+ Q P
Sbjct: 80 HVLCRVVDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRP 139
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
+T H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EW+F
Sbjct: 140 LARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKF 199
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV 240
+HI+RGQPRRHLLTTGWS FV K+L++GDA +FLRGE+G LR+GVRR A + P
Sbjct: 200 RHIYRGQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPA 259
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKM 298
+Q L A AV T T+F +YY PR +Q FI+ K+ + + SVGMR +M
Sbjct: 260 PHNQCSSNSNLGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRM 319
Query: 299 RFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
R+E +D+ ERR TG I+G + W GSKW+ L ++WD+ + P RVSPWEIE +
Sbjct: 320 RYESDDASERRCTGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGS 379
Query: 359 SAPLNLAQPAVKSKRP------RSIDIPASASAFWYQGSTQSHDITQ 399
+ + P+ K +P I +P + + + GS + H + Q
Sbjct: 380 VSGSQMCAPSSKRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
Length = 1081
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 175/341 (51%), Positives = 236/341 (69%), Gaps = 6/341 (1%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E +LPSK++C +
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICML 78
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + ++ + D L + +Q FCK LTASDTST
Sbjct: 79 HNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQS-RQPAEFFCKTLTASDTST 137
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSV 197
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R E +L +G+RR QQ ++ SSVISS SMH+G+LA+AAHA
Sbjct: 198 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 257
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE E+S RR+ GTI G+
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 317
Query: 318 GDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
D S +W S+WR+L++ WDE A +RP RVS WE+EP V
Sbjct: 318 SDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 358
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR +D+T KGYD+L +L +MF I+GQL R W +V+ D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
Length = 702
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 175/403 (43%), Positives = 235/403 (58%), Gaps = 28/403 (6%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
G G + ELW ACAGP+ +PR G V Y PQGH+E + + +P +L
Sbjct: 29 GGGAVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHIGGDADAAGA------AVPPHVL 82
Query: 79 CRVVHIELLAEQETDEVYAQITLHPET--------------DQTEPRSPDQCLPEPPKQT 124
CRVV + L A+ TDEVYA+++L PE + + D +P +T
Sbjct: 83 CRVVDVTLHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLART 142
Query: 125 VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIF 184
H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EW+F+HI+
Sbjct: 143 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIY 202
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ 244
RGQPRRHLLTTGWS FV K+LV+GDA +FLRGE+G LR+GVRR A + P + +Q
Sbjct: 203 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPALHNQ 262
Query: 245 SMHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
L A AV T T+F +YY PR SQ FI+ K+ +++ SVGMR +MR+E
Sbjct: 263 CSSQTTLGNVAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRSLNQPISVGMRCRMRYES 322
Query: 303 EDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+D+ ERR TG I+G + W GSKW+ L ++WD+ P RVSPWEIE + +
Sbjct: 323 DDASERRCTGIIIGSREAEPIWYGSKWKCLVVRWDDGIECHWPNRVSPWEIEVTGSVSGS 382
Query: 363 NLAQPAVKSKRP------RSIDIPASASAFWYQGSTQSHDITQ 399
++ P K +P I +P + + + GS + H + Q
Sbjct: 383 HMCAPNSKRLKPCLPQVNPEIVLPNGSVSSDFAGSVRFHKVLQ 425
>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
Length = 1117
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/378 (49%), Positives = 246/378 (65%), Gaps = 12/378 (3%)
Query: 18 PGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DL 73
PG G+ + ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P + +L
Sbjct: 20 PGKGEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNL 79
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
PS++LC + ++ L A+ ETDEVYAQ+TL P D+ D L QT FCK
Sbjct: 80 PSRLLCILHNVTLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQT-DFFCKT 138
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A + PPLD ++ P QEL AKDLH W F+HI+RGQP+RH
Sbjct: 139 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRH 198
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV+ KRL AGDA +F+R E +L +G+RR Q +++ SSV+SS SMH+G+L
Sbjct: 199 LLTTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGIL 258
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPER 308
A AAHA ++ F V+Y PR S+F+I L KY +A + + S+GMRF+M FE E+S R
Sbjct: 259 AAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTR 318
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
R+ GTI G+ D +W S+WR+L++ WDE +R RVS WEIEP A P
Sbjct: 319 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPF-FICPPP 377
Query: 368 AVKSKRPRSIDIPASASA 385
+SKRPR +P S+
Sbjct: 378 FFRSKRPRQPGMPDDESS 395
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GYD+L +L + F I+GQL R + W +V+ D E D
Sbjct: 1005 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1063
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1064 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1094
>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
Length = 698
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 177/407 (43%), Positives = 237/407 (58%), Gaps = 28/407 (6%)
Query: 17 GPGS-GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
GPG G + ELW ACAGP+ +PR G V Y PQGH+E + + +P
Sbjct: 24 GPGGRGAVCLELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASA----VPP 79
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQC---------------LPEP 120
+LCRVV + L A+ TDEVYA+++L PE + E R+ Q P
Sbjct: 80 HVLCRVVDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRP 139
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
+T H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EW+F
Sbjct: 140 LARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKF 199
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV 240
+HI+RGQPRRHLLTTGWS FV K+L++GDA +FLRGE+G LR+GVRR A + P
Sbjct: 200 RHIYRGQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPA 259
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKM 298
+Q L A AV T T+F +YY PR +Q FI+ K+ + + SVGMR +M
Sbjct: 260 PHNQCSSNSNLGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRM 319
Query: 299 RFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
R+E +D+ ERR TG I+G + W GSKW+ L ++WD+ + P RVSPWEIE +
Sbjct: 320 RYESDDASERRCTGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGS 379
Query: 359 SAPLNLAQPAVKSKRP------RSIDIPASASAFWYQGSTQSHDITQ 399
+ + P+ K +P I +P + + + GS + H + Q
Sbjct: 380 VSGSQMCAPSSKRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
Length = 827
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 185/407 (45%), Positives = 249/407 (61%), Gaps = 40/407 (9%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V YFPQGH+EQ + + T +DLP +I+CRVV ++
Sbjct: 39 ELWHACAGPLISLPQKGSVVVYFPQGHLEQHQVQESHTRT-----YDLPPQIICRVVDVK 93
Query: 86 LLAEQETDEVYAQITLHPE-----TDQTEPRS---------PDQCLPEPPKQTV-HSFCK 130
L AE DE+YAQ++L E D++ RS +Q + ++T+ H FCK
Sbjct: 94 LQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGI----RRTIPHMFCK 149
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDL+G+ WRF+HI+RGQPRR
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQPRR 209
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQ-QSSMPSSVISSQSMHLG 249
HLLTTGWS+F K+L GDA +FLR ++GELR+G+RR Q Q +P + + Q +
Sbjct: 210 HLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSRVN 269
Query: 250 VLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
+L+ A A+ LF +YY PR S +F++ KYL + H FS+GMR K+R E ED+ E
Sbjct: 270 MLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVE 329
Query: 308 RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE--PFVASAPLNL 364
+R+TG I GVGD +WP SKWR L ++WD+ A +RVSPWEIE V+S L
Sbjct: 330 KRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSLVSSFSFPL 389
Query: 365 AQPAVKSKRPRS------IDIPASASAFWYQGSTQSHDITQVVGATE 405
SKRP+ DIP + GST+S +V+ E
Sbjct: 390 KS---TSKRPKMNFPSIITDIPLPDGS-GLSGSTESSRFQKVLQGQE 432
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 94/180 (52%), Gaps = 20/180 (11%)
Query: 460 EEVERGKKSEASLG-CWLFGIDLKHN--SNTAAPLGRKVVDPT-TGTSGVKGSARAASDF 515
E E K S G C LFG LK + S P+ R +V P SG+
Sbjct: 641 EHSEYQKSETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGM---------- 690
Query: 516 DASQNQDLKEVKRGMADVSRKETQNKQGSA-ASTRTRTKVQMQGIAVGRAVDLTALKGYD 574
+ +Q ++ + + N GS STR TKV Q VGRAVDLT L GYD
Sbjct: 691 --TSHQTFPPTDPKISGIHL--SPNSGGSLQPSTRRCTKVYKQESLVGRAVDLTKLTGYD 746
Query: 575 DLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
DL ELE++ +++G LR PR W VV+TD+ DMML GD+ W EFC +V KI I++ EEV
Sbjct: 747 DLIFELERLLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 806
>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
Length = 1119
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 240/359 (66%), Gaps = 8/359 (2%)
Query: 4 VEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE 63
V PN + S++G S + ELW ACAGPLV +P G V YFPQGH EQ+ AS +E
Sbjct: 3 VPPNGFMANSAEGERKS--INSELWHACAGPLVALPPVGSLVVYFPQGHSEQVAASMQKE 60
Query: 64 LTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPP 121
+LPSK++C + ++ L A+ ETDEVYAQ+TL P + D+ + D L +
Sbjct: 61 TDFIPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVNKYDKEALLASDMGLKQS- 119
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
+Q FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL A+DLH W F+
Sbjct: 120 RQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFR 179
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R E +L +G+RR QQ ++ SSVI
Sbjct: 180 HIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVI 239
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMR 299
SS SMH+G+LA AAHA ++ F ++Y PR S+F+I +KY +A++ S+GMRF+M
Sbjct: 240 SSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKAMYTQVSLGMRFRMM 299
Query: 300 FEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
FE E+S RR+ GTI G+ D +W S+WR+L++ WDE +RP RVS WE+EP V
Sbjct: 300 FETEESGVRRYMGTITGISDLDPVRWKTSQWRNLQVGWDESTAGERPSRVSIWEVEPVV 358
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK-WAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T KGYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 992 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 1050
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1051 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1081
>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/367 (50%), Positives = 241/367 (65%), Gaps = 9/367 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P + +LPS++LC + ++
Sbjct: 29 ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 88
Query: 85 ELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
L A+ ETDEVYAQ+TL P D+ D L QT FCK LTASDTSTHGG
Sbjct: 89 TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQT-DFFCKTLTASDTSTHGG 147
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R+ A + PPLD ++ P QEL AKDLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 148 FSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 207
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
KRL AGDA +F+R E +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA ++
Sbjct: 208 GKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 267
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
F V+Y PR S+F+I L KY +A + + S+GMRF+M FE E+S RR+ GTI G+ D
Sbjct: 268 PFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISD 327
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W S+WR+L++ WDE +R RVS WEIEP A P +SKRPR
Sbjct: 328 LDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPF-FICPPPFFRSKRPRQPG 386
Query: 379 IPASASA 385
+P S+
Sbjct: 387 MPDDESS 393
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GYD+L +L + F I+GQL R + W +V+ D E D
Sbjct: 922 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 980
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 981 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1011
>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
Length = 1113
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/362 (50%), Positives = 238/362 (65%), Gaps = 9/362 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P + +LPSK+LC + ++
Sbjct: 26 ELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASLKKDVNAQIPNYPNLPSKLLCLLHNV 85
Query: 85 ELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
L A+ ETDEVY Q+TL P + D+ D L QT FCK LTASDTSTHGG
Sbjct: 86 TLHADPETDEVYVQMTLQPVSSFDKDALLRSDLALKSNKPQT-EFFCKTLTASDTSTHGG 144
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 145 FSVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 204
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
KRL AGD+ +F+R E +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA ++
Sbjct: 205 GKRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 264
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
F VYY PR S+F+I L KY +AV+ + S+GMRF+M FE E+S RR GTI G+ D
Sbjct: 265 PFTVYYNPRASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESGTRRHMGTITGISD 324
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W S+WR+L++ WDE +R RVS WEIEP A P +SK PR
Sbjct: 325 LDAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPF-FICPPPFFRSKHPRQPG 383
Query: 379 IP 380
+P
Sbjct: 384 MP 385
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GYD+L +L + F I+GQL + + W +V+TD E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHEND 1059
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
Length = 1120
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 235/350 (67%), Gaps = 11/350 (3%)
Query: 18 PGSGDLYR-----ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
P SG+ R ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ +
Sbjct: 10 PNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPSYPN 69
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCK 130
LPSK++C + ++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK
Sbjct: 70 LPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKDAILASDFGLKQN-RQPTEFFCK 128
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A + PPLD ++ P QEL AKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKR 188
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS F+++KRL AGD+ +F+R E +L +G+RR QQ ++ SSVISS SMH+G+
Sbjct: 189 HLLTTGWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGI 248
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LA AAHA ++ F +YY PR S+F++ L KY +A++ S+GMRF+M FE E+S R
Sbjct: 249 LAAAAHAAANNSPFTIYYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
R+ GT+ G+ D +W S+WR+L++ WDE +RP RVS W+IEP V
Sbjct: 309 RYMGTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR +D+T KGYD+L +L +MF I+GQL R W +V+ D E D
Sbjct: 993 RTYTKVQKRG-SVGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1051
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1052 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1082
>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1113
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 185/370 (50%), Positives = 243/370 (65%), Gaps = 13/370 (3%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW+ACAGPL+ +P G V YFPQGH EQ+ AS +++ Q P + +LPSKI C + ++
Sbjct: 28 ELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIPCLLHNV 87
Query: 85 ELLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
L A+ +TDEVYAQ+ L P +TD L +P + FCK LTASDTSTH
Sbjct: 88 TLHADPDTDEVYAQMALRPVPSFDTDALLRSDISLKLSKPQPEF---FCKQLTASDTSTH 144
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R+ A + PPLD +L +P QEL A+DLH WRF+HI+RG+P+RHLLTTGWS F
Sbjct: 145 GGFSVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPKRHLLTTGWSLF 204
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
++ KRL+AGD+ +F+R E +L +G+RR Q S++ SSV+SS SMH+GVLA AA AV
Sbjct: 205 ISGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAAAQAVAN 264
Query: 261 STLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F V+Y PR S+F+I L KY +AV+ H S GM F+M FE EDS RR+ GTI+GV
Sbjct: 265 NSPFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSGTRRYMGTIIGV 324
Query: 318 GDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
D S +W S WR+L++ WDE R RVS WEIEP V + P +SKRPR
Sbjct: 325 SDLDSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEP-VTTPYFICPPPFFRSKRPRL 383
Query: 377 IDIPASASAF 386
+ +P F
Sbjct: 384 LGMPDDEPDF 393
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GY++L +L F I+GQL R++ W +V+ D E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHEND 1059
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
Length = 1112
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 243/375 (64%), Gaps = 11/375 (2%)
Query: 16 GGPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF- 71
G PG + + ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P +
Sbjct: 18 GNPGEVEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYP 77
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPSK++C + +I L A+ E DEVYAQ+TL P D+ D + QT FC
Sbjct: 78 NLPSKLVCLLHNITLHADPEADEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQT-EFFC 136
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+
Sbjct: 137 KTLTASDTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQELVARDLHDNLWTFRHIYRGQPK 196
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SSV+SS SMH+G
Sbjct: 197 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIG 256
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSP 306
+LA AAHA ++ F V+Y PR S+F+I L KY +A + S+GMRF+M FE E+S
Sbjct: 257 ILAAAAHAAANNSPFTVFYNPRASHSEFVIPLAKYYKATYSSQVSLGMRFRMMFETEESG 316
Query: 307 ERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
RR+ GTI G+ D +W S+WR+L++ WDE +R RVS WEIEP A +
Sbjct: 317 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPT 376
Query: 366 QPAVKSKRPRSIDIP 380
P +SKRPR +P
Sbjct: 377 PPFFRSKRPRLPGMP 391
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L +L + F I+GQL R + W +V+ D E D
Sbjct: 1001 RTFTKVHKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1059
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ ++
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQIS 1090
>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
Length = 1057
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 172/337 (51%), Positives = 230/337 (68%), Gaps = 6/337 (1%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +LPSK++C + ++
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFIPSYPNLPSKLICMLHNVT 82
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+TL P + ++ + D L + +Q FCK LTASDTSTHGGF
Sbjct: 83 LHADVETDEVYAQMTLQPVSKYEKEALLASDMGLKQN-RQPTEFFCKTLTASDTSTHGGF 141
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +G+RR QQ ++ SSVISS SMH+G+LA AAHA ++
Sbjct: 202 KRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 261
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
F ++Y PR S+F+I +KY +A++ S+GMRF+M FE E+S RR+ GTI G+ D
Sbjct: 262 FTIFYNPRASPSEFVIPFSKYNKALYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMD 321
Query: 322 E-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
+W S+WR+L++ WDE +RP RVS WEIEP V
Sbjct: 322 PVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 540 NKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK-WA 597
N+ RT TKVQ +G +VGR++D+T KGY++L +L +MF I+GQL P+ W
Sbjct: 921 NQTNQTQRMRTYTKVQKRG-SVGRSIDVTRYKGYNELRHDLARMFGIEGQLEDPQSSDWK 979
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+V+ D E D++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 980 LVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1019
>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
Length = 470
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 231/348 (66%), Gaps = 13/348 (3%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L+ Q G + ELW ACAGPLV +P+ G VYYF QGH EQ+ ST + T Q P +
Sbjct: 34 LTDQSGTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNY 93
Query: 72 -DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPS+++C+V ++ L A++++DE+YAQ++L P +++ PD L K FC
Sbjct: 94 PNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLNRSKHPAEFFC 153
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + PPLD T PTQEL +DLH W F+HI+RGQP+
Sbjct: 154 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPK 213
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV SKRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+G
Sbjct: 214 RHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG 273
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSP 306
VLA AAHA T F+++Y PR ++F+I L KY +A+ S GMRF M FE EDS
Sbjct: 274 VLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSG 333
Query: 307 ERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+R + +W GSKWR+L+++WDEP +P RVSPW+IE
Sbjct: 334 KRSDMDPL--------RWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 373
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 591 RPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
RP+ W +V+ D E D++L GDD W EF V+ I I S EV+ M+
Sbjct: 402 RPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMS 449
>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
Length = 1125
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 176/350 (50%), Positives = 235/350 (67%), Gaps = 11/350 (3%)
Query: 18 PGSGDLYR-----ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
P SG+ R ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +
Sbjct: 10 PNSGEGERKTINSELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAASMQKEADFIPSYPN 69
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCK 130
LPSK++C + ++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK
Sbjct: 70 LPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEALLASDMGLKQN-QQPTEFFCK 128
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A + PPLD ++ P QE+ AKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKR 188
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV++KRL AGD+ +F+R E +L +G++R QQ ++ SSVISS SMH+G+
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGI 248
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LA AAHA ++ F ++Y PR S+F+I L KY +A+ + S+GMRF+M FE E+S R
Sbjct: 249 LAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALFNQVSLGMRFRMMFETEESGVR 308
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
R+ GTI G+ D +W S+WR+L++ WDE +RP RVS W+IEP V
Sbjct: 309 RYMGTITGITDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ G +VGR +D+T KGYD+L +L +MF I+GQL R +W +V+ D E D
Sbjct: 998 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1056
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1057 ILLVGDDPWEEFVSCVQSIKILSSSEVQQMS 1087
>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
Full=Auxin-responsive protein IAA22
gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
Length = 1086
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 236/361 (65%), Gaps = 9/361 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAGPLV +P G V YFPQGH EQ+ AS ++ +LPSK++C + +
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVT 82
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTSTHGGF
Sbjct: 83 LHADTETDEVYAQMTLQPVNKYDREALLASDMGL-KLNRQPTEFFCKTLTASDTSTHGGF 141
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD ++ P QE+ AKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +G+RR Q ++ SSVISS SMH+G+LA AAHA S+
Sbjct: 202 KRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSP 261
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
F +++ PR S+F++ L KY +A++ S+GMRF+M FE ED RR+ GT+ G+ D
Sbjct: 262 FTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLD 321
Query: 322 E-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDI 379
+W GS+WR+L++ WDE RP RVS WEIEP + P + P + K PR +
Sbjct: 322 PVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI--TPFYICPPPFFRPKYPRQPGM 379
Query: 380 P 380
P
Sbjct: 380 P 380
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 71/118 (60%), Gaps = 12/118 (10%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T GYD+L +L +MF I+GQL W +V+TD E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSET 664
++L GDD W EF V+ I I S+ EV+ M S++G+ AI ++ SET
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQM---------SLDGDLAAIPTTNQACSET 1065
>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
Length = 1049
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 236/361 (65%), Gaps = 9/361 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAGPLV +P G V YFPQGH EQ+ AS ++ +LPSK++C + +
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVT 82
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTSTHGGF
Sbjct: 83 LHADTETDEVYAQMTLQPVNKYDREALLASDMGL-KINRQPTEFFCKTLTASDTSTHGGF 141
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD ++ P QE+ AKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +G+RR Q ++ SSVISS SMH+G+LA AAHA S+
Sbjct: 202 KRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSP 261
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
F +++ PR S+F++ L KY +A++ S+GMRF+M FE ED RR+ GT+ G+ D
Sbjct: 262 FTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLD 321
Query: 322 E-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDI 379
+W GS+WR+L++ WDE RP RVS WEIEP + P + P + K PR +
Sbjct: 322 PVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI--TPFYICPPPFFRPKYPRQPGM 379
Query: 380 P 380
P
Sbjct: 380 P 380
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 12/122 (9%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTD 602
A RT TKVQ +G +VGR++D+T GY++L ++L +MF I+GQL P+ W +V+TD
Sbjct: 917 AQRMRTYTKVQKRG-SVGRSIDVTRYSGYEELRNDLARMFGIEGQLEDPQISDWKLVYTD 975
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKS 662
E D++L GDD W EF V+ I I S+ EV+ M S++G+ AI ++ S
Sbjct: 976 HENDILLVGDDPWEEFVNCVQNIKILSSAEVQQM---------SLDGDLAAIPTTNQACS 1026
Query: 663 ET 664
ET
Sbjct: 1027 ET 1028
>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
Length = 1123
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/337 (51%), Positives = 228/337 (67%), Gaps = 6/337 (1%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +LPSK++C + ++
Sbjct: 9 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDGIPSYPNLPSKLICMLHNVT 68
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+TL P + DQ + L + +Q FCK LTASDTSTHGGF
Sbjct: 69 LHADTETDEVYAQMTLQPVNKYDQEALLLSEMGLKQN-RQPAEFFCKTLTASDTSTHGGF 127
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS F++S
Sbjct: 128 SVPRRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLTTGWSVFISS 187
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +G++R QQ ++ SSVISS SMH+G+LA AAHA ++
Sbjct: 188 KRLCAGDSVLFIRDEKSQLLLGIKRTNRQQPALSSSVISSDSMHIGILAAAAHAAANNSP 247
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
F ++Y PR S+F+I L KY +A++ S+GMRF+M FE E+S RR+ GTI GV D
Sbjct: 248 FTIFYNPRASPSEFVIPLAKYNKAMYAQVSLGMRFRMMFETEESGVRRYMGTITGVSDLD 307
Query: 322 E-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
+W S+WR+L++ WDE +RP RVS W+IEP V
Sbjct: 308 PIRWKSSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 344
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR +D+T GYD+L +L +MF I+GQL R +W +V+ D E D
Sbjct: 997 RTYTKVQKRG-SVGRTIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1055
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S EV+ M+
Sbjct: 1056 ILLVGDDPWEEFVSCVQSIKILSCAEVQQMS 1086
>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1099
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/391 (48%), Positives = 249/391 (63%), Gaps = 13/391 (3%)
Query: 2 AYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTN 61
A V PN G +GG + ELW+ACAGPL+ +P G V YFPQGH EQ+ AS
Sbjct: 10 AAVAPNAG-----EGG-EKKTINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLK 63
Query: 62 QELTHQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPE 119
+++ Q P + +LPSKI C + ++ L A+ +TDEVYAQ+TL P + T+
Sbjct: 64 KDVDAQVPNYTNLPSKIPCLLHNVTLHADPDTDEVYAQMTLQPVPSFDTDALLRSDIFLR 123
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
K FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL A+DLH WR
Sbjct: 124 SSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWR 183
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
F+HI+RGQP+RHLLTTGWS F+ KRL+AGD+ +F+R E +L +G+RR Q S++ SS
Sbjct: 184 FRHIYRGQPKRHLLTTGWSLFIGGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSS 243
Query: 240 VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRF 296
V+SS SMH+GVLA AA AV ++ F V+Y PR S+F+I L KY +AV+ H S GMRF
Sbjct: 244 VLSSDSMHIGVLAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYSKAVYSHHISPGMRF 303
Query: 297 KMRFEGEDSPERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
+M FE EDS RR+ GTI+GV D S +W S WR+L++ WDE +R RVS WEIEP
Sbjct: 304 RMMFETEDSGTRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIEP 363
Query: 356 FVASAPLNLAQPAVKSKRPRSIDIPASASAF 386
V + P +SK PR + +P F
Sbjct: 364 -VTTPYFICPPPFFRSKIPRLLGMPDDEPDF 393
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKV +G AVGR++D+T GY+DL +L F I+GQL R W +V+ D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHEND 1045
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1046 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1076
>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/334 (52%), Positives = 224/334 (67%), Gaps = 19/334 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + T Q P + +LPS++LC+V ++
Sbjct: 20 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPNYPNLPSQLLCQVHNV 79
Query: 85 ELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+++TDE+YAQ++L P T++ PD L P K FCK LTASDTSTHGGF
Sbjct: 80 TLHADKDTDEIYAQMSLQPVNTEKDVFPIPDFGL-RPSKHPSEFFCKTLTASDTSTHGGF 138
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD T+ PTQEL +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 139 SVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGS 198
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L VGVRR QQ+++PSSV+S+ SMH+GVLA AAHA +
Sbjct: 199 KRLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHATANRSP 258
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
F ++Y PR S F+I L K+ +AV SVGMRF M FE E+S +RR+ GTIVG+ D
Sbjct: 259 FTIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGISDL 318
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
++WDEP + RVS WEIE
Sbjct: 319 -------------VEWDEPGCSDKQNRVSSWEIE 339
>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
Length = 1136
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 234/350 (66%), Gaps = 11/350 (3%)
Query: 18 PGSGD-----LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
P SG+ + ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +
Sbjct: 10 PNSGEGERKTMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPN 69
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCK 130
LPSK++C + ++ L A+ ETDEVYAQ+TL P + ++ + D L + +Q FCK
Sbjct: 70 LPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYEKEAILASDIGLKQN-RQPTEFFCK 128
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A + LPPLD ++ P QEL AKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKR 188
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV++KRL AGD+ +F+R E L +G+RR QQ ++ SSVISS SMH+G+
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGI 248
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LA AAHA ++ F ++Y PR S+F++ L KY +A++ S+GMRF+M FE E+S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
+ GTI G+ D +W S+WR++++ WDE +RP RVS WEIEP V
Sbjct: 309 GYMGTITGISDLDPVRWKSSQWRNIQVGWDESTAGERPRRVSIWEIEPVV 358
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR +D+T KGYD+L +L +MF I+GQL R W +V+ D E D
Sbjct: 1008 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1066
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1067 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1097
>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
Length = 1131
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 232/350 (66%), Gaps = 11/350 (3%)
Query: 18 PGSGDLYR-----ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
P SG+ R ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +
Sbjct: 10 PNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPN 69
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCK 130
LPSK++C + ++ L A+ ETDEVYAQ+TL P + ++ + D L + +Q FCK
Sbjct: 70 LPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQN-RQPTEFFCK 128
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A + PPLD ++ P QEL AKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKR 188
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV++KRL AGD+ +F+R E L +G+RR QQ ++ SSVISS SMH+G+
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGI 248
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LA AAHA ++ F ++Y PR S+F++ L KY + + S+GMRF+M FE E+S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKVTYTQVSLGMRFRMMFETEESGVR 308
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
R+ GTI G+ D +W S+WR++++ WDE +RP RVS WEIEP V
Sbjct: 309 RYMGTITGINDLDPVRWKSSQWRNIQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR +D+T KGYD+L +L +MF I+GQL R W +V+ D E D
Sbjct: 1003 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1061
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1062 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1092
>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
Length = 1122
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 235/350 (67%), Gaps = 11/350 (3%)
Query: 18 PGSGDLYR-----ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
P SG+ R ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +
Sbjct: 10 PNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPN 69
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCK 130
LPSK++C + ++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK
Sbjct: 70 LPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQN-QQPTEFFCK 128
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LTASDTSTHGGFSV R+ A + PPLD ++ P QE+ AKDLH W F+HI+RGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKR 188
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGV 250
HLLTTGWS FV++KRL AGD+ +F+R E +L +G++R QQ ++ SSVISS SMH+G+
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGI 248
Query: 251 LATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER 308
LA AAHA ++ F ++Y PR S+F+I KY +A+++ S+GMRF+M FE E+S R
Sbjct: 249 LAAAAHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALYNHASLGMRFRMMFETEESGVR 308
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
R+ GTI G+ D +W S+WR+L++ WDE +RP RVS W+IEP V
Sbjct: 309 RYMGTITGITDVDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ G +VGR +D+T KGYD+L +L +MF I+GQL R +W +V+ D E D
Sbjct: 995 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1053
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1054 ILLVGDDPWEEFVSCVQSIKILSSAEVQKMS 1084
>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
Length = 605
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/337 (49%), Positives = 222/337 (65%), Gaps = 16/337 (4%)
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTE---------PRSPDQCLPEPPKQTVH 126
+I CRV+ ++L A+QE D+VYAQ+TL PE + E S + L K H
Sbjct: 1 QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILC---KTIPH 57
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EW+F+HI+RG
Sbjct: 58 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRG 117
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QPRRHLLTTGWS FV K LV+GDA +FLRGE+GELR+G+RR + SS+P SV+SSQ +
Sbjct: 118 QPRRHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGL 177
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
HL +L+ AA+A+ T ++F V+Y PR S+F+I KY++++ S+GMRFKMR E ED
Sbjct: 178 HLSILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMED 237
Query: 305 SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN 363
S E+R TG I G D +WP SKWR L ++WD+ + V R ERVSPWEIEP ++ L+
Sbjct: 238 SAEKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALS 297
Query: 364 L-AQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQ 399
P +K + + + + + +SH + Q
Sbjct: 298 CPVAPRIKRLQTCLMSTLDGMNPLEFAETVRSHKVLQ 334
>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
Length = 1123
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/364 (48%), Positives = 238/364 (65%), Gaps = 17/364 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++C + ++
Sbjct: 12 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNV 71
Query: 85 ELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
L A+ ETDEVYAQ+TL P T Q + Q P+ FCK LTASDTS
Sbjct: 72 TLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQ-----TEFFCKTLTASDTS 126
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 127 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 186
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA
Sbjct: 187 LFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 246
Query: 259 KTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
++ F ++Y PR S +F+I KY +AV+ + S+GMRF+M FE E+ RR+ GTI
Sbjct: 247 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTIT 306
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
G+ D +W S+WR+L++ WDE A +R RVS WEIEP VA+ P +KRP
Sbjct: 307 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFFICPPPFFGAKRP 365
Query: 375 RSID 378
R +D
Sbjct: 366 RQLD 369
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF I+GQL R + W +V+ D E D
Sbjct: 989 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1047
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1048 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1078
>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
leschenaultii]
Length = 550
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 167/365 (45%), Positives = 222/365 (60%), Gaps = 28/365 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP+V +P+ G V YFPQGH+EQ+ LP + RVVH+
Sbjct: 24 ELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHFVGLSADA-----LPPHVFSRVVHVT 78
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------------PKQTVHSFCKIL 132
L+A+ TDEVYAQ++L P +++ + P + H FCK L
Sbjct: 79 LMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLGPTKIPHMFCKTL 138
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A +C PPLD PTQEL AKDLHG EWRF+HI+RGQPRRHL
Sbjct: 139 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFRHIYRGQPRRHL 198
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS+FV K+LV+GDA +FLRG++GELR+G+RR +S+ ++ +S ++
Sbjct: 199 LTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPAIQNSN------IS 252
Query: 253 TAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
A A+ +LF + Y PR S+FI+ K++++ +H S+G RFKM FE ED+ ERR+
Sbjct: 253 NIAQAISKKSLFHICYNPRDGQSEFIVPYWKFMKSFNHPISIGTRFKMNFESEDASERRY 312
Query: 311 TGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV 369
G I G+ D +WPGSKWR L ++WDE R RVSPWEIE + + P
Sbjct: 313 NGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIE-LTGTVSQGMMAPNS 371
Query: 370 KSKRP 374
K +P
Sbjct: 372 KRLKP 376
>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
Length = 1138
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/381 (47%), Positives = 242/381 (63%), Gaps = 20/381 (5%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
GC P + ELW ACAGPLV +P G V YFPQGH EQ+ AS +++
Sbjct: 13 GCEGEKTKAPA---INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHV 69
Query: 69 PLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLPEPP 121
P + +LPSK++C + ++ L A+ ETDEVYAQ+TL P T Q + Q P+
Sbjct: 70 PSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQ-- 127
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL A+DLH W F+
Sbjct: 128 ---TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFR 184
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SSV+
Sbjct: 185 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVL 244
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKM 298
SS SMH+G+LA AAHA ++ F ++Y PR S +F+I KY +AV+ + S+GMRF+M
Sbjct: 245 SSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRM 304
Query: 299 RFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
FE E+ RR+ GTI G+ D +W S+WR+L++ WDE A +R RVS WEIEP V
Sbjct: 305 MFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-V 363
Query: 358 ASAPLNLAQPAVKSKRPRSID 378
A+ P +KRPR +D
Sbjct: 364 AAPFFICPPPFFGAKRPRQLD 384
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF I+GQL R + W +V+ D E D
Sbjct: 1004 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1062
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1063 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1093
>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
Length = 1137
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/381 (47%), Positives = 242/381 (63%), Gaps = 20/381 (5%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
GC P + ELW ACAGPLV +P G V YFPQGH EQ+ AS +++
Sbjct: 13 GCEGEKTKAPA---INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHV 69
Query: 69 PLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLPEPP 121
P + +LPSK++C + ++ L A+ ETDEVYAQ+TL P T Q + Q P+
Sbjct: 70 PSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQ-- 127
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL A+DLH W F+
Sbjct: 128 ---TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFR 184
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SSV+
Sbjct: 185 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVL 244
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKM 298
SS SMH+G+LA AAHA ++ F ++Y PR S +F+I KY +AV+ + S+GMRF+M
Sbjct: 245 SSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRM 304
Query: 299 RFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
FE E+ RR+ GTI G+ D +W S+WR+L++ WDE A +R RVS WEIEP V
Sbjct: 305 MFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-V 363
Query: 358 ASAPLNLAQPAVKSKRPRSID 378
A+ P +KRPR +D
Sbjct: 364 AAPFFICPPPFFGAKRPRQLD 384
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF I+GQL R + W +V+ D E D
Sbjct: 1003 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1061
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1062 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1092
>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
Length = 1161
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/381 (47%), Positives = 242/381 (63%), Gaps = 20/381 (5%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
GC P + ELW ACAGPLV +P G V YFPQGH EQ+ AS +++
Sbjct: 36 GCEGEKTKAPA---INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHV 92
Query: 69 PLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLPEPP 121
P + +LPSK++C + ++ L A+ ETDEVYAQ+TL P T Q + Q P+
Sbjct: 93 PSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQ-- 150
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL A+DLH W F+
Sbjct: 151 ---TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFR 207
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SSV+
Sbjct: 208 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVL 267
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKM 298
SS SMH+G+LA AAHA ++ F ++Y PR S +F+I KY +AV+ + S+GMRF+M
Sbjct: 268 SSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRM 327
Query: 299 RFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
FE E+ RR+ GTI G+ D +W S+WR+L++ WDE A +R RVS WEIEP V
Sbjct: 328 MFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-V 386
Query: 358 ASAPLNLAQPAVKSKRPRSID 378
A+ P +KRPR +D
Sbjct: 387 AAPFFICPPPFFGAKRPRQLD 407
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF I+GQL R + W +V+ D E D
Sbjct: 1027 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1085
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1086 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1116
>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
Length = 954
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 170/339 (50%), Positives = 229/339 (67%), Gaps = 16/339 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + +LPS++LC+V +I
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A+++TDEVYAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD------VFPIPTLGAYTKSKHPTEYFCKNLTASDT 152
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 153 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 212
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R E +L +GVRR QQ+ + SSV+S+ SMH+GVLA AAHA
Sbjct: 213 SLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHA 272
Query: 258 VKTSTLFI-VYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
++ ++ S F+I + +Y +A + SVGMRF M FE E+S +RR+TGT+VG
Sbjct: 273 ASSAFGHSWNLHRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVG 332
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+ D+ +WP SKWR+L+++WDE +RPERVS W+IE
Sbjct: 333 ISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 371
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ QG +VGR++D+T + Y +L + MF +QG+L +W +V+ D E D
Sbjct: 851 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S EV+ M+
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
Length = 1020
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 236/361 (65%), Gaps = 9/361 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAGPLV +P G V YFPQGH EQ+ AS ++ +LPSK++C + +
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVT 82
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTSTHGGF
Sbjct: 83 LHADTETDEVYAQMTLQPVNKYDREALLASDMGL-KLNRQPTEFFCKTLTASDTSTHGGF 141
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD ++ P QE+ AKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL+AGD+ +F+R E +L + +RR Q ++ SSVISS SMH+G+LA AAHA ++
Sbjct: 202 KRLIAGDSVLFVRDEKSQLTLVIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANNSP 261
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
F +++ PR S+F++ L KY +A++ S+GMRF+M FE ED RR+ GT+ GV D
Sbjct: 262 FTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGVSDLD 321
Query: 322 E-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDI 379
+W GS+WR+L++ WDE RP RVS WEIEP + P + P + K PR +
Sbjct: 322 PVRWKGSQWRNLQVGWDESTAGDRPSRVSVWEIEPVI--TPFYICPPPFFRPKYPRQPGM 379
Query: 380 P 380
P
Sbjct: 380 P 380
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 14/123 (11%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL---RPRDKWAVVFT 601
A RT TKVQ +G +VGR++D+T GYD+L ++L +MF I+GQL RP D W +V+T
Sbjct: 888 AQRMRTYTKVQKRG-SVGRSIDVTRYSGYDELRNDLARMFGIEGQLEDPRPSD-WKLVYT 945
Query: 602 DDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELK 661
D E D++L GDD W EF V+ I I S+ EV+ M S++G+ AI +++
Sbjct: 946 DHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQM---------SLDGDLAAIPATNQVC 996
Query: 662 SET 664
SET
Sbjct: 997 SET 999
>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
Length = 1143
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/360 (49%), Positives = 239/360 (66%), Gaps = 9/360 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
+LW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++C + +
Sbjct: 40 DLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICLLHSV 99
Query: 85 ELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ +TDEVYAQ+TL P T E + + + + FCK LTASDTSTHGGF
Sbjct: 100 TLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTSTHGGF 159
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + LPPLD ++ P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV
Sbjct: 160 SVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGG 219
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +G+RR + Q +++ SSV+SS SMH+GVLA AAHA ++
Sbjct: 220 KRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAANNSP 279
Query: 264 FIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
F ++Y PR S +F+I KY +A++ + S+GMRF+M FE E+ RR+ GTI G+ D
Sbjct: 280 FTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGMRRYMGTITGISDL 339
Query: 321 SE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA-QPAVKSKRPRSID 378
+W S+WR+L++ WDE A +R RVS WEIEP +AP + QP KRPR ID
Sbjct: 340 DPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPI--AAPFFICPQPFFGVKRPRQID 397
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L L +MF I+GQL R + W +V+ D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1068
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
Length = 1149
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 179/364 (49%), Positives = 238/364 (65%), Gaps = 17/364 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++C + +I
Sbjct: 45 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICLLHNI 104
Query: 85 ELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
L A+ ETDEVYAQ+TL P T Q + Q P+ FCK LTASDTS
Sbjct: 105 TLHADLETDEVYAQMTLQPVTSYGKEALQLSELALKQSRPQ-----NEFFCKTLTASDTS 159
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A + PPLD ++ P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 160 THGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 219
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA
Sbjct: 220 LFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAD 279
Query: 259 KTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
++ F ++Y PR S +F+I KY +AV+ + S+GMRF+M FE E+ RR+ GTI
Sbjct: 280 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTIT 339
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
G+ D +W S+WR+L++ WDE A +R RVS WEIEP VA+ P SKRP
Sbjct: 340 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFFICPPPFFGSKRP 398
Query: 375 RSID 378
R +D
Sbjct: 399 RQLD 402
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF I+GQL R + W +V+ D E D
Sbjct: 1015 RTFTKVYKRG-AVGRSIDISQYAGYDELKHALARMFSIEGQLEERQRIGWKLVYRDHEDD 1073
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1074 ILLLGDDPWEEFVNCVKYIRILSPQEVQQMS 1104
>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
Length = 991
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 181/381 (47%), Positives = 242/381 (63%), Gaps = 20/381 (5%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
GC P + ELW ACAGPLV +P G V YFPQGH EQ+ AS +++
Sbjct: 36 GCEGEKTKAPA---INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHV 92
Query: 69 PLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLPEPP 121
P + +LPSK++C + ++ L A+ ETDEVYAQ+TL P T Q + Q P+
Sbjct: 93 PSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQ-- 150
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL A+DLH W F+
Sbjct: 151 ---TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFR 207
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SSV+
Sbjct: 208 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVL 267
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKM 298
SS SMH+G+LA AAHA ++ F ++Y PR S +F+I KY +AV+ + S+GMRF+M
Sbjct: 268 SSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRM 327
Query: 299 RFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
FE E+ RR+ GTI G+ D +W S+WR+L++ WDE A +R RVS WEIEP V
Sbjct: 328 MFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-V 386
Query: 358 ASAPLNLAQPAVKSKRPRSID 378
A+ P +KRPR +D
Sbjct: 387 AAPFFICPPPFFGAKRPRQLD 407
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF I+GQL R + W +V+ D E D
Sbjct: 857 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 915
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
++L GDD W EF VK I I S +EV+ M+ + +++
Sbjct: 916 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNI 956
>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
Length = 1109
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/360 (49%), Positives = 238/360 (66%), Gaps = 9/360 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
+ +ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P + +LPSK+ C +
Sbjct: 32 INQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLFCLL 91
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P D+ D L QT FCK LTASDTST
Sbjct: 92 HNVTLHADPETDEVYAQMTLQPVPSFDKDALLRSDLTLKSNKPQT-DFFCKTLTASDTST 150
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 151 HGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 210
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV+ KRL AGD+ +F+R + +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA
Sbjct: 211 FVSGKRLFAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 270
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAV-HHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
++ F V+Y PR S+F+I L KY +AV + S+GMRF+M FE E+S RR+ GTI G
Sbjct: 271 NNSPFTVFYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYMGTITG 330
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S+WR+L++ WDE ++ RVS WEIEP A P +SKRPR
Sbjct: 331 ISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF-FICPPPFFRSKRPR 389
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GY +L +L + F I+GQL R + W +V+ D E D
Sbjct: 997 RTYTKVYKRG-AVGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1055
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1056 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1086
>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
Length = 1143
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/376 (47%), Positives = 243/376 (64%), Gaps = 11/376 (2%)
Query: 9 GCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE 68
GC + P + ELW ACAGPLV +P G V YFPQGH EQ+ AS +++
Sbjct: 22 GCEGEKKAPP----INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHV 77
Query: 69 PLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQ-TEPRSPDQCLPEPPKQTVH 126
P + +LPSK++C + ++ L A+ ETDEVYAQ+TL P T E + + P+
Sbjct: 78 PSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLLPVTSYGKEALQLSELALKQPRPQTE 137
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QE+ A+DLH W F+HI+RG
Sbjct: 138 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRG 197
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM 246
QP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ SSV+SS SM
Sbjct: 198 QPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSM 257
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGE 303
H+G+LA AAHA ++ F ++Y PR S +F++ KY +A++ + S+GMRF+M FE E
Sbjct: 258 HIGILAAAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETE 317
Query: 304 DSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+ RR+ GTI G+ D +W S+WR+L++ WDE A +R RVS WEIEP VA+
Sbjct: 318 ELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFF 376
Query: 363 NLAQPAVKSKRPRSID 378
P SKRPR +D
Sbjct: 377 ICPPPFFGSKRPRQLD 392
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF ++GQL R + W +V+ D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDISQFNGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 1068
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 645
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/343 (47%), Positives = 214/343 (62%), Gaps = 19/343 (5%)
Query: 45 VYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPE 104
V Y PQGH++ L + + CRVV + L A+ TDEVYAQ++L PE
Sbjct: 1 VVYLPQGHLDHLGDAPAPSPAAVP------PHVFCRVVDVTLHADASTDEVYAQLSLLPE 54
Query: 105 TDQTEPRSPD-----------QCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATEC 153
++ R + + + + + H FCK LTASDTSTHGGFSV R+ A +C
Sbjct: 55 NEEVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDC 114
Query: 154 LPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFV 213
PPLD + P QEL AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+LV+GDA +
Sbjct: 115 FPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVL 174
Query: 214 FLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS 273
FLRG++GELR+GVRR ++ + SQ +LG LA AHAV T ++F ++Y PR S
Sbjct: 175 FLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRLS 234
Query: 274 Q--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRS 331
Q FI+ K+ ++ FSVG RFKMR+E ED+ ERR+TG I G GD W GSKW+
Sbjct: 235 QSEFIVPYWKFTKSFSQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADPMWRGSKWKC 294
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
L ++WD+ +RP RVSPWEIE +++ +LA P K +P
Sbjct: 295 LLVRWDDDGEFRRPNRVSPWEIELTSSASGSHLAAPTSKRMKP 337
>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
Length = 1096
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/349 (51%), Positives = 233/349 (66%), Gaps = 16/349 (4%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILC 79
G + ELW+ACAGPLV +P G V YFPQGH EQ+ AS ++ Q P + +LPSK+ C
Sbjct: 26 GGVNSELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDGDVQVPNYSNLPSKLPC 85
Query: 80 RVVHIELLAEQETDEVYAQITLHPET--DQTEPRSPDQCL----PEPPKQTVHSFCKILT 133
+ + L A+ +TDEVYA++TL P + D D L P+P FCK LT
Sbjct: 86 TLHSLTLHADSDTDEVYARMTLQPVSSFDMDAILRSDISLKSNKPQP-----EFFCKQLT 140
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSV R+ A + PPLD + P QEL AKDLHG W+F+HI+RGQP+RHLL
Sbjct: 141 ASDTSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLL 200
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS F++ KRL+AGD+ +F+R E +L +G+RR Q +++ SSV+SS SMH+G+LA
Sbjct: 201 TTGWSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 260
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRF 310
AAHA ++ F V+Y PR S+F+I L KY AV+ H S GMRF+M FE EDS RR+
Sbjct: 261 AAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSGTRRY 320
Query: 311 TGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
GT++GV D S +W S+WR+L++ WDE +R RVS WEIEP A
Sbjct: 321 MGTVIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVTA 369
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GYD+L +L + F I+GQL R + W +V+ D E D
Sbjct: 984 RTYTKVYKRG-AVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHEND 1042
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1043 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/384 (46%), Positives = 246/384 (64%), Gaps = 21/384 (5%)
Query: 6 PNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELT 65
P GC +G + + +LW ACAGPLV++P G V YFPQGH EQ+ AS +++
Sbjct: 26 PGVGC----EGEKKAPAINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVD 81
Query: 66 HQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLP 118
P + +LPSK++C + +I L A+ ETDEVYA++TL P T Q + Q P
Sbjct: 82 AHVPNYPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEALQLSELALKQARP 141
Query: 119 EPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW 178
+ FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QE+ A+DLH W
Sbjct: 142 Q-----NEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVW 196
Query: 179 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS 238
F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ S
Sbjct: 197 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISS 256
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMR 295
SV+SS SMH+G+LA AAHA ++ F ++Y PR S +F+I KY +AV+ + S+GMR
Sbjct: 257 SVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMR 316
Query: 296 FKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
F+M FE E+ RR+ GTI G+ D +W S+WR+L++ WDE A +R RVS WEIE
Sbjct: 317 FRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 376
Query: 355 PFVASAPLNLAQPAVKSKRPRSID 378
P VA+ P +KRPR +D
Sbjct: 377 P-VAAPFFICPPPFFGAKRPRQLD 399
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 11/115 (9%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GY++L L +MF I+GQL R + W +V+ D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA------TSSKP--IASSVEGEGTA 653
++L GDD W EF VK I I S +EV+ M+ +S P SS EG G A
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDGDLGSSIVPNQACSSSEGGGNA 1155
>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/384 (46%), Positives = 246/384 (64%), Gaps = 21/384 (5%)
Query: 6 PNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELT 65
P GC +G + + +LW ACAGPLV++P G V YFPQGH EQ+ AS +++
Sbjct: 26 PGVGC----EGEKKAPAINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVD 81
Query: 66 HQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLP 118
P + +LPSK++C + +I L A+ ETDEVYA++TL P T Q + Q P
Sbjct: 82 AHVPNYPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEALQLSELALKQARP 141
Query: 119 EPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW 178
+ FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QE+ A+DLH W
Sbjct: 142 Q-----NEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVW 196
Query: 179 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS 238
F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E +L +G+RR Q +++ S
Sbjct: 197 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISS 256
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMR 295
SV+SS SMH+G+LA AAHA ++ F ++Y PR S +F+I KY +AV+ + S+GMR
Sbjct: 257 SVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMR 316
Query: 296 FKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
F+M FE E+ RR+ GTI G+ D +W S+WR+L++ WDE A +R RVS WEIE
Sbjct: 317 FRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 376
Query: 355 PFVASAPLNLAQPAVKSKRPRSID 378
P VA+ P +KRPR +D
Sbjct: 377 P-VAAPFFICPPPFFGAKRPRQLD 399
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 11/115 (9%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GY++L L +MF I+GQL R + W +V+ D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA------TSSKP--IASSVEGEGTA 653
++L GDD W EF VK I I S +EV+ M+ +S P SS EG G A
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDGDLGSSIVPNQACSSSEGGGNA 1155
>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
Length = 1096
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 241/364 (66%), Gaps = 9/364 (2%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKI 77
G+ + +ELW ACAGPLV +P G + YFPQGH EQ+ AS ++ Q P + +LPSK+
Sbjct: 1 GATKVNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKL 60
Query: 78 LCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTAS 135
+C + + +LA+ +TDEVYA++TL P D+ + + L + QT FCK LTAS
Sbjct: 61 ICILHSVTMLADPDTDEVYARMTLQPVSNCDKETLLASELALKQTRPQT-EFFCKTLTAS 119
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSV R+ A P LD ++ P QEL A+DLH W F+HI+RGQP+RHLLTT
Sbjct: 120 DTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTT 179
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV+ KRL+AGD+ +F+R +L +G+RR Q +++ SSV+SS SMH+G+LA AA
Sbjct: 180 GWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 239
Query: 256 HAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTG 312
HA ++ F +YY PR TS+F+I KY +AV+ + S+GMRF+M FE E+S RR+ G
Sbjct: 240 HAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMG 299
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKS 371
TI G+ D +W S WR++++ WDE A +R RVS WEIEP +A + P +
Sbjct: 300 TITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFI-YPSPLFTA 358
Query: 372 KRPR 375
KRPR
Sbjct: 359 KRPR 362
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL +++ W +V+ D E D
Sbjct: 978 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1036
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W +F K V+ I I S +E M
Sbjct: 1037 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1066
>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
Length = 1090
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/370 (48%), Positives = 240/370 (64%), Gaps = 17/370 (4%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCR 80
+L ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P + +LP+K++C
Sbjct: 15 NLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYPNLPAKLICL 74
Query: 81 VVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCL----PEPPKQTVHSFCKILTA 134
+ ++ L A+ ETDEVYAQ+TL P D+ D + P+P FCK LTA
Sbjct: 75 LHNVTLHADPETDEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQP-----EFFCKTLTA 129
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A + PPLD +L P QEL A+DLH W F+H++RGQP+RHLLT
Sbjct: 130 SDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLLT 189
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS V+ KRL AGD+ +F+R E + +G+R+ Q +++ SSV+SS SMH+G+LA A
Sbjct: 190 TGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSMHIGILAAA 249
Query: 255 AHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFT 311
AHA ++ F V+Y PR S+F+I L KY +A + S+GMRF+M FE E+S RR+
Sbjct: 250 AHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESGTRRYM 309
Query: 312 GTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
GTI G+ D +W S+WR+L++ WDE +R RVS WEIEP A L + P
Sbjct: 310 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITAPF-LICSSPFFS 368
Query: 371 SKRPRSIDIP 380
SKRPR +P
Sbjct: 369 SKRPRQPGMP 378
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L +L + F I+GQL R + W +V+ D E D
Sbjct: 978 RTYTKVYKRG-AVGRSIDIARYSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1036
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1037 VLLVGDDPWEEFVSCVRCIKILSPQEVQQMS 1067
>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
Length = 451
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/299 (54%), Positives = 202/299 (67%), Gaps = 4/299 (1%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
G DL RE+WKAC+G L++V + GERVYYFP+ H+EQLE S+NQEL + L +LP KIL
Sbjct: 20 GDDDLCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPPKIL 79
Query: 79 CRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
CRV+HI LL E ET+EVYA+ L P DQ EP + D + P+ SFCK LT SD
Sbjct: 80 CRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQSDIK 139
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
++ G SV K A +C PPLDM P QEL AKDL G EWRFKH +GQPRRH LT GWS
Sbjct: 140 SNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTNGWS 199
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
TFVTSK+L+AGD VFLR E G+L VG+RRL++Q S+ +S S QSM + VLA A+HA
Sbjct: 200 TFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVASHAF 258
Query: 259 KTSTLFIVYYKP---RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
T +LF VY KP ++SQFI+ ++KY E +H VGM +M+ E ED R T +
Sbjct: 259 ATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESEDYCHVRRTNDL 317
>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1110
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 244/366 (66%), Gaps = 17/366 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW+ACAGPLV +P +G V YFPQGH EQ+ AS N++ Q P + +LPSK+LC + ++
Sbjct: 25 ELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYPNLPSKLLCLLHNL 84
Query: 85 ELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCL----PEPPKQTVHSFCKILTASDTS 138
LLA+ ETDEVYAQITL P D+ D L P+P FCK LTASDTS
Sbjct: 85 TLLADPETDEVYAQITLQPVPSFDKDALLRSDLALKSSKPQP-----DFFCKQLTASDTS 139
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 140 THGGFSVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTGWS 199
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+ KRL+AGD+ +F+R E L +G+RR Q +++ SSV+SS SMH+G+LA AAHA
Sbjct: 200 LFVSGKRLLAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 259
Query: 259 KTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
++ F V+Y PRT S+F+I L KY ++V+ H S+GMRF+M FE EDS RR+ GTI
Sbjct: 260 ANNSPFTVFYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRYMGTIT 319
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
G+ D +W S+WR+L++ WDE ++ RVS WEIEP A P +SKRP
Sbjct: 320 GISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPF-FICPPPFFRSKRP 378
Query: 375 RSIDIP 380
R +P
Sbjct: 379 RQPGMP 384
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GY++L +L + F I+GQL R + W +V+ D E D
Sbjct: 998 RTYTKVYKRG-AVGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1056
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1057 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1087
>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
Length = 1113
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 239/358 (66%), Gaps = 9/358 (2%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVH 83
+ELW ACAGPLV +P G + YFPQGH EQ+ AS ++ Q P + +LPSK++C +
Sbjct: 24 QELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 83
Query: 84 IELLAEQETDEVYAQITLHPET--DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ +LA+ +TDEVYA++TL P T D+ + + L + QT FCK LTASDTSTHG
Sbjct: 84 VTMLADPDTDEVYARMTLQPVTQCDKETLLASELALKQTRPQT-EFFCKTLTASDTSTHG 142
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R+ A P LD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 143 GFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFV 202
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTS 261
+ KRL+AGD+ +F+R +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA +
Sbjct: 203 SGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANN 262
Query: 262 TLFIVYYKPR--TSQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
+ F +YY PR TS+F+I KY +AV+ + S+GMRF+M FE E+S RR+ GTI G+
Sbjct: 263 SQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGIS 322
Query: 319 DFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
D +W S WR++++ WDE A +R RVS WEIEP +A + P +KRPR
Sbjct: 323 DLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFI-YPSPLFTAKRPR 379
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL +++ W +V+ D E D
Sbjct: 995 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1053
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W +F K V+ I I S +E M
Sbjct: 1054 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1083
>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
Length = 674
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/396 (43%), Positives = 236/396 (59%), Gaps = 22/396 (5%)
Query: 4 VEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE 63
++ N+ S + P + R+LW ACAGP+V +PR G V Y PQGH L A+
Sbjct: 3 IDLNYTASGGEEDAPAPAPVCRDLWHACAGPVVSLPRRGSAVVYLPQGH---LSAAGAGG 59
Query: 64 LTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE----------PRSP 113
E LP + CRVV +EL A+ TDEVYA++ L E + E
Sbjct: 60 RIRGEVAVALPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDM 119
Query: 114 DQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDL 173
+ E + +H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDL
Sbjct: 120 EDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDL 179
Query: 174 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQ 233
HG +WRF+HI+RGQPRRHLLTTGWS+FV K+LV+GDA +FLRG++GELR+GVRR +
Sbjct: 180 HGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLK 239
Query: 234 SSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFS 291
+ SS+S + L+ A ++K ++F + Y PR S++++ K++++ +H
Sbjct: 240 NEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVC 299
Query: 292 VGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSP 350
+GMRFK +E ED ERR +G I GV + +WPGSKWRSL ++W++ RVSP
Sbjct: 300 IGMRFKFHYESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSP 358
Query: 351 WEIEPFVASAPLNLAQPAVKSKRPR-----SIDIPA 381
WEIE S + + A SKR + ++D+PA
Sbjct: 359 WEIEIVGGSISVAHSLSASSSKRTKLCPQGNLDVPA 394
>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
Length = 1139
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/365 (48%), Positives = 238/365 (65%), Gaps = 19/365 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++C + +
Sbjct: 41 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHGV 100
Query: 85 ELLAEQETDEVYAQITLHP------ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
L A+ +TDEVYAQ+TL P E Q + Q P+ + FCK LTASDTS
Sbjct: 101 NLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQ-----MEFFCKTLTASDTS 155
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A + PPLD ++ P QEL A+D+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 156 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWS 215
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+ KRL AGD+ + +R E +L +G+RR Q +++ SSV+SS SMH+GVLA AAHA
Sbjct: 216 LFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAA 275
Query: 259 KTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
S+ F ++Y PR S +F+I KY +A++ + S+GMRF+M FE E+ RR+ GTI
Sbjct: 276 ANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTIT 335
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA-QPAVKSKR 373
G+ D +W S+WR+L++ WDE A +R RVS WEIEP +AP L QP KR
Sbjct: 336 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP--VAAPFFLCPQPFFGVKR 393
Query: 374 PRSID 378
PR +D
Sbjct: 394 PRQLD 398
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L L +MF I+GQL R + W +V+ D E D
Sbjct: 1006 RTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1064
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1065 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1095
>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
Length = 1142
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/365 (48%), Positives = 238/365 (65%), Gaps = 19/365 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++C + +
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHGV 103
Query: 85 ELLAEQETDEVYAQITLHP------ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
L A+ +TDEVYAQ+TL P E Q + Q P+ + FCK LTASDTS
Sbjct: 104 NLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQ-----MEFFCKTLTASDTS 158
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A + PPLD ++ P QEL A+D+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 159 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWS 218
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+ KRL AGD+ + +R E +L +G+RR Q +++ SSV+SS SMH+GVLA AAHA
Sbjct: 219 LFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAA 278
Query: 259 KTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
S+ F ++Y PR S +F+I KY +A++ + S+GMRF+M FE E+ RR+ GTI
Sbjct: 279 ANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTIT 338
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA-QPAVKSKR 373
G+ D +W S+WR+L++ WDE A +R RVS WEIEP +AP L QP KR
Sbjct: 339 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP--VAAPFFLCPQPFFGVKR 396
Query: 374 PRSID 378
PR +D
Sbjct: 397 PRQLD 401
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L L +MF I+GQL R + W +V+ D E D
Sbjct: 1009 RTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1067
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1068 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1098
>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 731
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 236/396 (59%), Gaps = 22/396 (5%)
Query: 4 VEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE 63
++ N S + P G + R+LW ACAGP+V +PR G V Y PQGH L A+
Sbjct: 60 IDLNNTASGGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVVYLPQGH---LSAAGAGG 116
Query: 64 LTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTE----------PRSP 113
E LP + CRVV +EL A+ TDEVYA++ L E + E
Sbjct: 117 GIRGEVAVALPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDM 176
Query: 114 DQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDL 173
+ E + +H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDL
Sbjct: 177 EDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDL 236
Query: 174 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQ 233
HG +WRF+HI+RGQPRRHLLTTGWS+FV K+LV+GDA +FLRG++GELR+GVRR +
Sbjct: 237 HGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLK 296
Query: 234 SSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFS 291
+ SS+S + L+ A ++K ++F + Y PR S++++ K++++ +H
Sbjct: 297 NEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVC 356
Query: 292 VGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSP 350
+GMRFK FE ED ERR +G I GV + +WPGSKWRSL ++W++ RVSP
Sbjct: 357 IGMRFKFHFESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSP 415
Query: 351 WEIEPFVASAPLNLAQPAVKSKRPR-----SIDIPA 381
WEIE S + + A SKR + ++D+PA
Sbjct: 416 WEIEIVGGSISVAHSLSASSSKRTKLCPQGNLDVPA 451
>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
Length = 472
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 162/299 (54%), Positives = 202/299 (67%), Gaps = 4/299 (1%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
G DL RE+WKAC+G L++V + GERVYYFP+ H+EQLE S+NQEL + L +LP KIL
Sbjct: 20 GDDDLCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPPKIL 79
Query: 79 CRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
CRV+HI LL E ET+EVYA+ L P DQ EP + D + P+ SFCK LT SD
Sbjct: 80 CRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQSDIK 139
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
++ G SV K A +C PPLDM P QEL AKDL G EWRFKH +GQPRRH LT GWS
Sbjct: 140 SNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTNGWS 199
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
TFVTSK+L+AGD VFLR E G+L VG+RRL++Q S+ +S S QSM + VLA A+HA
Sbjct: 200 TFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVASHAF 258
Query: 259 KTSTLFIVYYKP---RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
T +LF VY KP ++SQFI+ ++KY E +H VGM +M+ E ED R T +
Sbjct: 259 ATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESEDYCHVRRTNDL 317
>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
Length = 1116
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 239/361 (66%), Gaps = 12/361 (3%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVH 83
+ELW ACAGPLV +P G + YFPQGH EQ+ AS ++ Q P + +LPSK++C +
Sbjct: 24 QELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 83
Query: 84 IELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
+ +LA+ +TDEVYA++TL P + D+ + + L + QT FCK LTASDTS
Sbjct: 84 VTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQT-EFFCKTLTASDTS 142
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A P LD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 143 THGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 202
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+ KRL+AGD+ +F+R +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA
Sbjct: 203 LFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAA 262
Query: 259 KTSTLFIVYYKPR--TSQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
++ F +YY PR TS+F+I KY +AV+ + S+GMRF+M FE E+S RR+ GTI
Sbjct: 263 ANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTIT 322
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
G+ D +W S WR++++ WDE A +R RVS WEIEP +A + P +KRP
Sbjct: 323 GISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFI-YPSPLFTAKRP 381
Query: 375 R 375
R
Sbjct: 382 R 382
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL +++ W +V+ D E D
Sbjct: 998 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1056
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W +F K V+ I I S +E M
Sbjct: 1057 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1086
>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 1104
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/362 (50%), Positives = 241/362 (66%), Gaps = 9/362 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV++P +G V YFPQGH EQ+ AS N+++ Q P + +LPSK+LC + +
Sbjct: 10 ELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKLLCLLHTL 69
Query: 85 ELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
L A+ +TD+VYAQITL P D+ D L E K FCK LTASDTSTHGG
Sbjct: 70 TLHADPQTDQVYAQITLQPLPSFDKDALLRSDLAL-ESTKPPPDFFCKQLTASDTSTHGG 128
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R+ A + PPLD ++ P QEL A+DLH W+F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 129 FSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLLTTGWSLFVS 188
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
KRL AGD+ +F+R E +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA ++
Sbjct: 189 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNS 248
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
F V+Y PR S+F+I L KY ++V+ H S+GMRF+M FE EDS RR GT+ G+ D
Sbjct: 249 PFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRHMGTVTGISD 308
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
QW S+WR+L++ WDE ++ RVS WEIEP A P +SKRPR
Sbjct: 309 LDPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPF-FICPPPFFRSKRPRQPG 367
Query: 379 IP 380
+P
Sbjct: 368 MP 369
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+T GY++L +L + F I+GQL R + W +V+ D E D
Sbjct: 992 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1050
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1051 VLLLGDDPWEEFVNCVRCIKILSPQEVQQMS 1081
>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
Length = 1147
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/360 (48%), Positives = 238/360 (66%), Gaps = 9/360 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
+LW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++C + +
Sbjct: 44 DLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICLLHSV 103
Query: 85 ELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ +TDEVYAQ+TL P T E + + + + FCK LTASDTSTHGGF
Sbjct: 104 TLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTSTHGGF 163
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + LPPLD + P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV
Sbjct: 164 SVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGG 223
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +G+RR + Q +++ SSV+SS SMH+GVLA AAHA ++
Sbjct: 224 KRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAANNSP 283
Query: 264 FIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
F ++Y PR S +F+I K+ +A++ + S+GMRF+M FE E+ RR+ GTI G+ D
Sbjct: 284 FTIFYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRYMGTITGITDL 343
Query: 321 SE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA-QPAVKSKRPRSID 378
+W S+WR+L++ WDE A +R RVS WEIEP +AP + QP KRPR ID
Sbjct: 344 DPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPI--AAPFFICPQPFFGVKRPRQID 401
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L + +MF I+GQL R + W +V+TD E D
Sbjct: 1014 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1072
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1073 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1103
>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
Length = 1088
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/388 (46%), Positives = 250/388 (64%), Gaps = 19/388 (4%)
Query: 6 PNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELT 65
P C + G + +ELW ACAGPLV +P G V YFPQGH EQ+ AS ++
Sbjct: 4 PESSCGGDEEAGMRRSKVNQELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDAD 63
Query: 66 HQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR-----SPDQCLPE 119
Q P + +LPSK++C + ++ + A+ +TDEVYA++TL P ++ T+ + + L +
Sbjct: 64 AQIPSYPNLPSKLICILHNVTMEADPDTDEVYARMTLQPVSNVTQCDKEILLASEIALKQ 123
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
QT FCK LTASDTSTHGGFSV R+ A P LD +L P QEL A+DLH W
Sbjct: 124 SRPQT-EFFCKTLTASDTSTHGGFSVPRRAAERIFPQLDFSLQPPAQELQARDLHDNTWT 182
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
F+HIFRGQP+RHLLTTGWS F++ KRL+AGD+ +F+R +L +G+RR Q +++ SS
Sbjct: 183 FRHIFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDGKHQLLLGIRRANRQPTNLSSS 242
Query: 240 VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRF 296
V+SS SMH+GVLA AAHA ++ F ++Y PR S+F+I KY +AV+ + S+GMRF
Sbjct: 243 VLSSDSMHIGVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRF 302
Query: 297 KMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
+M FE E+S RR+ GTI G+ D +W S+WRS+++ WDE A +R RVS WEIEP
Sbjct: 303 RMMFETEESGTRRYMGTITGISDLDPVRWKSSQWRSIQVAWDEAAPTERRTRVSLWEIEP 362
Query: 356 -----FVASAPLNLAQPAVKSKRPRSID 378
F+ +PL A+ ++++P ID
Sbjct: 363 VIAPFFIYPSPLFTAK---RARQPGMID 387
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL--RPRDKWAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL + R W +V+ D E D
Sbjct: 975 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1033
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W +F V+ I I S +E M
Sbjct: 1034 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1063
>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
Length = 648
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 202/297 (68%), Gaps = 4/297 (1%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
G L RE+W+AC+G L++VP+ GERV+YFP+ H++QLE S+N E L LP KIL
Sbjct: 16 GDNALCREIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLEWIQGLQLSHLPRKIL 75
Query: 79 CRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
CRV+HI LL E +T+EVYA+ L P +Q EP +P+ C EPP+ SFCK LT SD
Sbjct: 76 CRVLHIRLLVEHDTEEVYAETILLPNQEQNEPSTPEFCPLEPPRPQYQSFCKALTTSDIK 135
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
++ G SV RK A +C PPLDM PTQEL DL G EWRFKH+F+GQPRRHLL GWS
Sbjct: 136 SNWGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHVFQGQPRRHLLKHGWS 195
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
TFVTSK+L+AGD VFLR E G+L VG+RRL++Q +S+ SS S QSM GVLA A+HA
Sbjct: 196 TFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSRQSME-GVLAVASHAF 254
Query: 259 KTSTLFIVYYKP---RTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
T +LF VYYKP R+SQFI+ L+ Y E +H VG + + DS +R +G
Sbjct: 255 ATRSLFSVYYKPCYNRSSQFIMSLSNYFEGGNHGPGVGTISRTQHTSLDSHVKRTSG 311
>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205542 [Cucumis sativus]
Length = 1107
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 183/385 (47%), Positives = 246/385 (63%), Gaps = 19/385 (4%)
Query: 13 SSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
S++GG + ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q ++
Sbjct: 17 SNEGGLEKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVTIYL 76
Query: 73 LPSKI-LCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCL----PEPPKQTV 125
++ + L A+ ETDEVYAQ+TL P D+ D L P+P
Sbjct: 77 YHYYFAFLKLCSLYLXADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQP----- 131
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
FCK LTASDTSTHGGFSV R+ A + PPLD ++ P QEL AKDLH W F+HI+R
Sbjct: 132 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYR 191
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E +L +G+RR Q +++ SSV+SS S
Sbjct: 192 GQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDS 251
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEG 302
MH+G+LA AAHA ++ F V+Y PR S+F+I L KY +AV + S+GMRF+M FE
Sbjct: 252 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFET 311
Query: 303 EDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
E+S RR+ GTI G+ D +W GS+WR+L++ WDE +R RVS WEIEP + AP
Sbjct: 312 EESGTRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVI--AP 369
Query: 362 LNLAQPA-VKSKRPRSIDIPASASA 385
+ P ++SKRPR +P S+
Sbjct: 370 FFICPPPFLRSKRPRQPGMPDDDSS 394
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L +L + F I+GQL R K W +V+ D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W +F V+ I I S +EV+ M+
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
Length = 1096
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/375 (46%), Positives = 236/375 (62%), Gaps = 23/375 (6%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAGPLV +P G V YFPQGH EQ+ AS ++ +LPSK++C + +
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVT 82
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTSTHGGF
Sbjct: 83 LHADTETDEVYAQMTLQPVNKYDREALLASDMGL-KLNRQPTEFFCKTLTASDTSTHGGF 141
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD ++ P QE+ AKDLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 SVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 204 KRLVAGDAFVFL--------------RGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
KRL AGD+ +F+ R E +L +G+RR Q ++ SSVISS SMH+G
Sbjct: 202 KRLFAGDSVLFVRIGLSSSHKGTWVCRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIG 261
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
+LA AAHA S+ F +++ PR S+FI+ L KY +A++ S+GMRF+M FE ED
Sbjct: 262 ILAAAAHANANSSPFTIFFNPRASPSEFIVPLAKYNKALYAQVSLGMRFRMMFETEDCGV 321
Query: 308 RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
RR+ GT+ G+ D +W GS+WR+L++ WDE RP RVS WEIEP + P +
Sbjct: 322 RRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI--TPFYICP 379
Query: 367 PA-VKSKRPRSIDIP 380
P + K PR +P
Sbjct: 380 PPFFRPKYPRQPGMP 394
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 72/118 (61%), Gaps = 12/118 (10%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T GYD+L +L +MF I+GQL W +V+TD E D
Sbjct: 968 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1026
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSET 664
++L GDD W EF V+ I I S+ EV+ M S++G+ AI + ++ SET
Sbjct: 1027 ILLVGDDPWEEFVNCVQNIKILSSVEVQQM---------SLDGDLAAIPITNQACSET 1075
>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
Length = 1149
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/362 (48%), Positives = 238/362 (65%), Gaps = 11/362 (3%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
+LW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++C + +
Sbjct: 44 DLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICLLHSV 103
Query: 85 ELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ +TDEVYAQ+TL P T E + + + + FCK LTASDTSTHGGF
Sbjct: 104 TLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTSTHGGF 163
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + LPPLD + P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV
Sbjct: 164 SVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGG 223
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E +L +G+RR + Q +++ SSV+SS SMH+GVLA AAHA ++
Sbjct: 224 KRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAANNSP 283
Query: 264 FIVYYKPR----TSQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
F ++Y PR ++F+I K+ +A++ + S+GMRF+M FE E+ RR+ GTI G+
Sbjct: 284 FTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRYMGTITGIT 343
Query: 319 DFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA-QPAVKSKRPRS 376
D +W S+WR+L++ WDE A +R RVS WEIEP +AP + QP KRPR
Sbjct: 344 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPI--AAPFFICPQPFFGVKRPRQ 401
Query: 377 ID 378
ID
Sbjct: 402 ID 403
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L + +MF I+GQL R + W +V+TD E D
Sbjct: 1016 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1074
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ M+
Sbjct: 1075 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1105
>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
Full=Auxin-responsive protein IAA21/IAA23/IAA25;
AltName: Full=Protein BIPOSTO; AltName: Full=Protein
NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
TRANSPORT INHIBITOR RESPONSE 5
gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/359 (47%), Positives = 235/359 (65%), Gaps = 10/359 (2%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS ++ +LPSK++C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTST
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQPNEFFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD ++ P QEL AKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R +L +G+RR QQ ++ SSVISS SMH+GVLA AAHA
Sbjct: 199 FVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE E+ RR+ GT+ G+
Sbjct: 259 NNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 318
Query: 318 GDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
D +W S+WR+L+I WDE A RP RVS W+IEP + P + P RPR
Sbjct: 319 SDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--TPFYICPPPF--FRPR 373
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/359 (47%), Positives = 235/359 (65%), Gaps = 10/359 (2%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS ++ +LPSK++C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTST
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQPNEFFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD ++ P QEL AKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R +L +G+RR QQ ++ SSVISS SMH+GVLA AAHA
Sbjct: 199 FVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE E+ RR+ GT+ G+
Sbjct: 259 NNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 318
Query: 318 GDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
D +W S+WR+L+I WDE A RP RVS W+IEP + P + P RPR
Sbjct: 319 SDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--TPFYICPPPF--FRPR 373
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
Length = 1100
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 172/359 (47%), Positives = 235/359 (65%), Gaps = 10/359 (2%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS ++ +LPSK++C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTST
Sbjct: 80 QNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQPNEFFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD ++ P QEL AKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R +L +G+RR QQ ++ SSVISS SMH+GVLA AAHA
Sbjct: 199 FVSNKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANA 258
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE E+ RR+ GT+ G+
Sbjct: 259 NNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGI 318
Query: 318 GDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
D +W S+WR+L+I WDE A RP RVS W+IEP + P + P RPR
Sbjct: 319 SDLDPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--TPFYICPPPF--FRPR 373
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 973 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1031
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1032 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1062
>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1165
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 235/360 (65%), Gaps = 11/360 (3%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS ++ +LPSK++C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTST
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQPNEFFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD ++ P QEL AKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R +L +G+RR QQ ++ SSVISS SMH+GVLA AAHA
Sbjct: 199 FVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANA 258
Query: 260 TSTLFIVYYKPR---TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE E+ RR+ GT+ G
Sbjct: 259 NNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTG 318
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S+WR+L+I WDE A RP RVS W+IEP + P + P RPR
Sbjct: 319 ISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--TPFYICPPPF--FRPR 374
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
Length = 1168
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 235/360 (65%), Gaps = 11/360 (3%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS ++ +LPSK++C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTST
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQPNEFFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD ++ P QEL AKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R +L +G+RR QQ ++ SSVISS SMH+GVLA AAHA
Sbjct: 199 FVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANA 258
Query: 260 TSTLFIVYYKPR---TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE E+ RR+ GT+ G
Sbjct: 259 NNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTG 318
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S+WR+L+I WDE A RP RVS W+IEP + P + P RPR
Sbjct: 319 ISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--TPFYICPPPF--FRPR 374
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 1041 RTYTKVQERG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHETD 1099
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ + I S+ EV+ M+
Sbjct: 1100 ILLVGDDPWEEFVNFVQSLKILSSAEVQQMS 1130
>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1150
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/360 (47%), Positives = 235/360 (65%), Gaps = 11/360 (3%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS ++ +LPSK++C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTST
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGL-KLNRQPNEFFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD ++ P QEL AKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R +L +G+RR QQ ++ SSVISS SMH+GVLA AAHA
Sbjct: 199 FVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANA 258
Query: 260 TSTLFIVYYKPR---TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE E+ RR+ GT+ G
Sbjct: 259 NNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTG 318
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S+WR+L+I WDE A RP RVS W+IEP + P + P RPR
Sbjct: 319 ISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--TPFYICPPPF--FRPR 374
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
Length = 1141
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/365 (48%), Positives = 237/365 (64%), Gaps = 19/365 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P + +LPSK++C + +
Sbjct: 33 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAQVPNYPNLPSKLICLLHSV 92
Query: 85 ELLAEQETDEVYAQITLHP------ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
L A+ +TDEVYAQ+TL P E Q + Q P+ + FCK LTASDTS
Sbjct: 93 ILQADPDTDEVYAQMTLQPVNTYAKEALQLSELALRQARPQ-----MEFFCKTLTASDTS 147
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A + P LD +L P QEL A+D+H W F+HIFRGQP+RHLLTTGWS
Sbjct: 148 THGGFSVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFRGQPKRHLLTTGWS 207
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+ K+L AGD+ +F+R E +L +G+RR Q +++ SSV+SS SMH+GVLA AAHA
Sbjct: 208 LFVSGKKLFAGDSVIFVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAA 267
Query: 259 KTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
S+ F ++Y PR S +F+I KY +A++ + S+GMRF+M E E+ RR+ GTI
Sbjct: 268 ANSSPFTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCETEELGTRRYMGTIT 327
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA-QPAVKSKR 373
G+ D +W S+WRSL++ WDE A +R RVS WEIEP +AP + QP KR
Sbjct: 328 GISDLDPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEIEPL--AAPFFICPQPFFGVKR 385
Query: 374 PRSID 378
R +D
Sbjct: 386 SRQLD 390
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY +L L +MF I+GQL R + W +V+TD E D
Sbjct: 1008 RTFTKVYKRG-AVGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDD 1066
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1067 VLLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1097
>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
Length = 1095
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/362 (48%), Positives = 238/362 (65%), Gaps = 14/362 (3%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVH 83
+ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + P + +LPSK++C +
Sbjct: 26 QELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICILRS 85
Query: 84 IELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
+ +LA+ +TDEVYA++TL P D+ + D L + QT FCK LTASDTS
Sbjct: 86 VTMLADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQTRPQT-EFFCKTLTASDTS 144
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A P LD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWS 204
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV+ KRL+AGD+ +F+R +L +G+RR Q ++ SSV+SS SMH+G+LA AAHA
Sbjct: 205 LFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAA 264
Query: 259 KTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
++ F V+Y PR S+F+I KY +AV+ + S+GMRF+M FE E+S RR+ GTI
Sbjct: 265 ANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTIT 324
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQPAVKSKR 373
G+ D +W S+WR++++ WDE A +R RVS WE+EP + AP + P +KR
Sbjct: 325 GISDMDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVI--APFFIYPSPLFTAKR 382
Query: 374 PR 375
PR
Sbjct: 383 PR 384
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL +++ W +V+ D E D
Sbjct: 977 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKD 1035
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
++L GDD W +F V+ I I S +E + M +S
Sbjct: 1036 VLLVGDDPWEDFVNCVRCIRILSPQEERQMRLAS 1069
>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
Length = 1165
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/360 (47%), Positives = 234/360 (65%), Gaps = 11/360 (3%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS ++ +LPSK++C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + D+ + D L + +Q FCK LTASDTST
Sbjct: 80 HNVTLNADPETDEVYAQMTLQPVNKYDRNALLASDMGL-KLNRQPNEFFCKTLTASDTST 138
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + P LD ++ P QEL AKD+H W F+HI+RGQP+RHLLTTGWS
Sbjct: 139 HGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSV 198
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KR AGD+ +F+R +L +G+RR QQ ++ SSVISS SMH+GVLA AAHA
Sbjct: 199 FVSTKRFFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANA 258
Query: 260 TSTLFIVYYKPR---TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE E+ RR+ GT+ G
Sbjct: 259 NNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTG 318
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+ D +W S+WR+L+I WDE A RP RVS W+IEP + P + P RPR
Sbjct: 319 ISDLDPVRWENSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--TPFYICPPPF--FRPR 374
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
Length = 657
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/381 (43%), Positives = 229/381 (60%), Gaps = 26/381 (6%)
Query: 18 PGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKI 77
P + RELW ACAGP+V +PR G +V Y PQ H+ + + LP +
Sbjct: 19 PSPTAVCRELWHACAGPIVALPRRGSKVVYLPQAHLAAAGCGGDVAVA-------LPPHV 71
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPR----------SPDQCLPEPPKQTVHS 127
CRVV +EL A+ TDEVYA++ L E + E + E + +
Sbjct: 72 ACRVVDVELCADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDTEDGDGERKSRMLQM 131
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
FCK LTASDTSTHGGFSV R+ A +C PLD P+QEL AKDLHG +WRF+HI+RGQ
Sbjct: 132 FCKTLTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQ 191
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMH 247
PRRHLLTTGWS+FV K+LV+GDA +FLRG++GEL++GVRR ++ SS S
Sbjct: 192 PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSK 251
Query: 248 LGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
+ L+ A+++K ++F + Y PR S+FI+ K+L++++H F +GMRFK+++ ED
Sbjct: 252 MNALSAVANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLNHPFCIGMRFKIQYGSEDV 311
Query: 306 PERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL 364
ERR +G I GV + +WPGS WRSL ++W++ R+SPWEIE S +
Sbjct: 312 NERR-SGMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIEIVGGSVSIAQ 370
Query: 365 AQPAVKSKRPR-----SIDIP 380
+ PA SKR + ++D+P
Sbjct: 371 SLPASSSKRTKLCSQSNLDVP 391
>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1083
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/369 (47%), Positives = 243/369 (65%), Gaps = 19/369 (5%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVH 83
+ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ Q P + +LPSK++C +
Sbjct: 22 QELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICILHS 81
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPR-----SPDQCLPEPPKQTVHSFCKILTASDTS 138
+ + ++ ETDEVYA++TL P ++ T+ + + L + QT FCK LTASDTS
Sbjct: 82 VTMQSDPETDEVYARMTLQPVSNVTQCDKEILLASELALKQNKPQT-EFFCKTLTASDTS 140
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A P LD +L P QEL A+DLH W F+HIFRGQP+RHLLTTGWS
Sbjct: 141 THGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLLTTGWS 200
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
F++ KRL+AGD+ +F+R +L +G+RR Q +++ SSV+SS SMH+GVLA AAHA
Sbjct: 201 LFISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAA 260
Query: 259 KTSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIV 315
++ F ++Y PR S+F+I KY +AV+ + S+GMRF+M FE E+S RR+ GTI
Sbjct: 261 ANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTIT 320
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP-----FVASAPLNLAQPAV 369
G+ D +W S+WR++++ WDE A +R RVS W+IEP F+ PL A+
Sbjct: 321 GISDLDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIAPFFIYPTPLFTAK--- 377
Query: 370 KSKRPRSID 378
++++P ID
Sbjct: 378 RARQPGMID 386
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL--RPRDKWAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL + R W +V+ D E D
Sbjct: 970 RTYTKVHKRG-AVGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1028
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W +F V+ I I S +E M
Sbjct: 1029 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1058
>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
Length = 744
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 227/374 (60%), Gaps = 37/374 (9%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW CAG L +P+ G V YFPQGH+EQ AS++ FDLP +I CRVV
Sbjct: 52 IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTFDLPPQIFCRVV 110
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP-----------EPPKQTVHSFCKI 131
+++LLA +E DEVY Q+TL P+ + + L P K T H FCK
Sbjct: 111 NVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKT 170
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EWRF+HI+RGQPRRH
Sbjct: 171 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 230
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV+ K LV+GDA +FLRGE GELR+G+RR ++ +P S+I +Q+ + VL
Sbjct: 231 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVL 290
Query: 252 ATAAHAVKTSTLF--IVYYKPRTSQFIIG----LNKY----LEAVHHCFSVGMRFKMRFE 301
+ AA+AV T ++F + + +T ++ +NK+ L +H+ +V +
Sbjct: 291 SLAANAVATKSMFHGLKVFNKQTHLNMLQDGNQVNKFFLKMLPEIHNLQNVEVFLS---- 346
Query: 302 GEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
+G + G+GD +WP SKWR L ++WD+ ERVSPWEI+P V+
Sbjct: 347 ---------SGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLP 397
Query: 361 PLNL-AQPAVKSKR 373
PL++ + P +K R
Sbjct: 398 PLSIQSSPRLKKLR 411
>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 284/571 (49%), Gaps = 97/571 (16%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V YFPQGH+EQ ++ LP + CR++ ++
Sbjct: 52 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIYGLPPHVFCRILDVK 104
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLP--------EPPKQ--TVHSFCKILTAS 135
L AE TDEVYAQ++L PE++ E + + + E K+ T H FCK LTAS
Sbjct: 105 LHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTAS 164
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
DTSTHGGFSV R+ A +C PPLD + P+QEL A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 165 DTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 224
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
GWS FV K+LV+GDA +FLRG++G+LR+GVRR S + +++ + + T
Sbjct: 225 GWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRR----ASQIEGTLMPYRPIVFSAFTTTN 280
Query: 256 HAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
H + S FII K+L+ V + F +GMRFK R E ED+ ERR G I
Sbjct: 281 HNWAS-----------WSNFIIPAPKFLKIVDYPFCIGMRFKARVESEDASERRSPGIIT 329
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP---------FVASAPLNLA 365
G+ D +WPGSKWR L ++WD+ +RVSPWEIEP FV + P +
Sbjct: 330 GISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEPSGSISNSGSFVTTGP-KRS 388
Query: 366 QPAVKSKRPRSIDIPASAS--------AFWYQGSTQSHDITQVVGATEGQSSESQVVRPM 417
+ S +P DIP S + +Q Q +I G S R
Sbjct: 389 RIGFSSGKP---DIPVSEGIRATDFEESLRFQRVLQGQEI--FPGFINTCSDGGAGARRG 443
Query: 418 RQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERG------------ 465
R K + +S H+++ Q + YA + P + + + G
Sbjct: 444 RFKGTEF----GDSYGFHKVLQGQETVPAYAITDHPQHGLSQRNIWCGPFQNFSTRILPP 499
Query: 466 -----------KKSEASLG-----------CWLFGIDLKHNSNTAAPLGRKVVDPTTGTS 503
S + G C LFG L +N + V P +
Sbjct: 500 SVSSSPSSVLITNSNSPNGRLEDHHGGPGRCRLFGFPL---TNETTAVASATVVPCVEGN 556
Query: 504 GVKGSARAASDFDASQNQDLKEVKRGMADVS 534
+KG++ S+ SQ +D+ ++ + D++
Sbjct: 557 SIKGASAVQSNHHHSQGRDIYAMRDMLLDIA 587
>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
Length = 1047
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/337 (48%), Positives = 223/337 (66%), Gaps = 6/337 (1%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPLV +P G V YFPQGH EQ+ AS +E +L SK++C + ++
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFVPSYPNLTSKLICMLHNVT 82
Query: 86 LLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ ETDEVYAQ+TL P + D+ + D + +Q FCK LTASDTSTHGGF
Sbjct: 83 LHADVETDEVYAQMTLQPVSKYDKEALLASDLGQKQS-RQPTEFFCKTLTASDTSTHGGF 141
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
V R+ A + PPLD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 142 FVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVST 201
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KR+ GD+ +F+R E +L +G+R QQ ++ SS+ISS SMH+G+LA AAHA ++
Sbjct: 202 KRIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLISSDSMHIGILAAAAHAAANNSP 261
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFS 321
F ++Y P S+F+I +KY +A++ S+GMRF+M F E+S RR+ GTI G+ D
Sbjct: 262 FTIFYNPSASPSEFVIPFSKYNKAMYTQGSLGMRFRMMFTTEESGVRRYMGTITGISDLD 321
Query: 322 E-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
+W S+WR+L++ WDE +RP RVS WEIEP V
Sbjct: 322 PVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPVV 358
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDK-WAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T KGYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 931 RTYTKVQKRG-SVGRSIDITCYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDREND 989
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 990 ILLVGDDPWEEFMSCVQSIKILSSAEVQQMS 1020
>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
Length = 856
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/352 (48%), Positives = 231/352 (65%), Gaps = 24/352 (6%)
Query: 60 TNQEL-THQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP 118
TN+E+ TH LP +++C++ + + A+ ETDEVYAQ+TL P T Q + D LP
Sbjct: 1 TNKEVDTHIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQEQK---DAYLP 57
Query: 119 E----PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLH 174
P +Q + FCK LTASDTSTHGGFSV R+ A + PPLD T P+QEL A+DLH
Sbjct: 58 AELGTPSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLH 117
Query: 175 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS 234
G EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGDA +F+ E +L +G+RR QS
Sbjct: 118 GNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQS 177
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FS 291
MPSSV+SS SMH+G+LA AAHA T++ F V+Y PR S+F+I L +Y +AV H S
Sbjct: 178 VMPSSVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRIS 237
Query: 292 VGMRFKMRFEGEDSPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSP 350
VGMRF+M FE E+S RR+ GTI G+ D +WP S WRS+K+ WDE +R RVS
Sbjct: 238 VGMRFRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSL 297
Query: 351 WEIEPFVASAPLNLAQPAVKSKRPRSIDIPA-----------SASAFWYQGS 391
WEIEP + + P+ + ++ +RP +P+ ++S W +G+
Sbjct: 298 WEIEP-LTTFPMYPSPFPLRLRRPWPSGLPSLHGIKDDNLGLNSSLMWLRGN 348
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT KV G + GR++D+T Y +L EL MF ++GQL R W +VF D E D
Sbjct: 723 RTFVKVHKLG-SYGRSLDITNFSSYHELRSELASMFGLEGQLEDPLRSGWQLVFVDREND 781
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
++L GDD W EF V I I S +EV+ M + S+
Sbjct: 782 VLLLGDDPWQEFVNNVWCIKILSPQEVQQMGRQDLALLHSI 822
>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
Length = 202
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/202 (72%), Positives = 170/202 (84%), Gaps = 2/202 (0%)
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
AS TSTHGGFSVLR+HA ECLPPLDMT + PTQEL AKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 1 ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
+GWS FV+SKRLVAGDAF+FLRGE+GELRVGVRR Q S++ SSVISS SMHLGVLAT
Sbjct: 61 QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120
Query: 254 AAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A HA+ T T+F VYYKPRT S+FII +KY+++V + +S+G RFKMRFEGE++PE+RFT
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFT 180
Query: 312 GTIVGVGDFSEQWPGSKWRSLK 333
GTIVG + + WP S WRSLK
Sbjct: 181 GTIVGSDNLDQLWPESSWRSLK 202
>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
Length = 1086
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 236/361 (65%), Gaps = 14/361 (3%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + P + +L SK++C + +
Sbjct: 24 ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83
Query: 85 ELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+LA+ +TDEVYA++TL P D+ + + L + QT FCK LTASDTST
Sbjct: 84 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQT-EFFCKTLTASDTST 142
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A P LD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 143 HGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSL 202
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV+ KRL+AGD+ +F+R +L +G+RR Q ++ SSV+SS SMH+G+LA AAHA
Sbjct: 203 FVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAA 262
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
++ F V+Y PR S+F+I KY +AV+ + S+GMRF+M FE E+S RR+ GTI G
Sbjct: 263 NNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITG 322
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQPAVKSKRP 374
+ D +W S+WR++++ WDE A +R RVS WE+EP + AP + P +KRP
Sbjct: 323 ISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVI--APFFIYPSPLFTAKRP 380
Query: 375 R 375
R
Sbjct: 381 R 381
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL +++ W +V+ D E D
Sbjct: 968 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKD 1026
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
++L GDD W +F V+ I I S +E + M +S
Sbjct: 1027 VLLVGDDPWEDFVNCVRCIRILSPQEERQMRLAS 1060
>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
Length = 1085
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 236/361 (65%), Gaps = 14/361 (3%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P G V YFPQGH EQ+ AS ++ + P + +L SK++C + +
Sbjct: 24 ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83
Query: 85 ELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+LA+ +TDEVYA++TL P D+ + + L + QT FCK LTASDTST
Sbjct: 84 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQT-EFFCKTLTASDTST 142
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A P LD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS
Sbjct: 143 HGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSL 202
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV+ KRL+AGD+ +F+R +L +G+RR Q ++ SSV+SS SMH+G+LA AAHA
Sbjct: 203 FVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAA 262
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVG 316
++ F V+Y PR S+F+I KY +AV+ + S+GMRF+M FE E+S RR+ GTI G
Sbjct: 263 NNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITG 322
Query: 317 VGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL-AQPAVKSKRP 374
+ D +W S+WR++++ WDE A +R RVS WE+EP + AP + P +KRP
Sbjct: 323 ISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVI--APFFIYPSPLFTAKRP 380
Query: 375 R 375
R
Sbjct: 381 R 381
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL +++ W +V+ D E D
Sbjct: 967 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKD 1025
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
++L GDD W +F V+ I I S +E + M +S
Sbjct: 1026 VLLVGDDPWEDFVNCVRCIRILSPQEERQMRLAS 1059
>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
Length = 479
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 194/314 (61%), Gaps = 53/314 (16%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LW CAGPL +P+ GE+VYYFPQGHIE +E ST EL H P+FDLPSK+ CRVV
Sbjct: 18 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 77
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I+ ++ TDEVYAQI+L P+T
Sbjct: 78 AIDRKVDKNTDEVYAQISLMPDTT------------------------------------ 101
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTF 200
DM+ TQ L AKDL+G EW FKH+FRG P+RH+ T+G WS F
Sbjct: 102 ---------------DMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 146
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
T+KRL+ GD FV LRGENGELR G+RR HQQ +PSSVIS+ M GV+A+ +A KT
Sbjct: 147 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 206
Query: 261 STLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+F V YKP +SQF+I +K+++A+++ + VG RF+M+FEG+D E+R+ GTI+GV D
Sbjct: 207 KCMFNVVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDM 266
Query: 321 SEQWPGSKWRSLKI 334
S W S+WRSLKI
Sbjct: 267 SPHWKDSEWRSLKI 280
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
TKV MQG+A+ RAVDLTA+ GY+ L +LE++F+++ +LR R++W +VFT++EG ML G
Sbjct: 369 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVG 428
Query: 612 DDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
DD WPEFC M K+IFI S EE+K M +K
Sbjct: 429 DDPWPEFCNMAKRIFICSKEEIKKMKLKNK 458
>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
Length = 821
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/409 (44%), Positives = 244/409 (59%), Gaps = 47/409 (11%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 87
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP----PKQTVHSFCKILTASDT 137
+ + A+ ETDEVYAQ+TL P Q + D LP KQ + FCK LTASDT
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPQEQN---DAYLPAEMGIMSKQPTNYFCKTLTASDT 144
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR------------ 185
STHGGFSV R+ A PPL ++ ++ LHG IF
Sbjct: 145 STHGGFSVPRRAAERVFPPLVISHSSLQHR---SLLHG-------IFMMSSGNSGISSEA 194
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
QP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS S
Sbjct: 195 SQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDS 254
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEG 302
MH+G+LA AAHA T++ F ++Y PR S+F+I L+KY++AV H SVGMRF+M FE
Sbjct: 255 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFET 314
Query: 303 EDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
E+S RR+ GTI V D +WP S WRS+K+ WDE +RP RVS WEIEP + + P
Sbjct: 315 EESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP-LTTFP 373
Query: 362 LNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
+ + ++ K P WY G HD + + G + E
Sbjct: 374 MYPSLFPLRVKHP------------WYSGVAALHDDSNALMWLRGVAGE 410
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + + RT KV G +VGR++D+T Y +L +EL +
Sbjct: 696 LQSPMYGCLDDSSGLLQNTGENDPAARTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 754
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 755 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 811
>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
Length = 668
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 231/391 (59%), Gaps = 18/391 (4%)
Query: 4 VEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE 63
++ N S + P G + R+LW ACAGP+V +PR G V Y PQGH L A+
Sbjct: 3 IDLNNTASGGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVVYLPQGH---LSAAGAGG 59
Query: 64 LTHQEPLFDLPSKILCRVVHIELLAEQETDEV-----YAQITLHPETDQTEPRSPDQCLP 118
E LP + CRVV +EL + V Y + TLH + E D
Sbjct: 60 GIRGEVAVALPPHVACRVVDVELCVSEPLSLVVGFSLYLRGTLHGGGIEREDDMEDG-DE 118
Query: 119 EPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW 178
E + +H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +W
Sbjct: 119 ERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKW 178
Query: 179 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS 238
RF+HI+RGQPRRHLLTTGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++
Sbjct: 179 RFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIF 238
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRF 296
SS+S + L+ A ++K ++F + Y PR S++++ K++++ +H +GMRF
Sbjct: 239 KAFSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRF 298
Query: 297 KMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
K FE ED ERR +G I GV + +WPGSKWRSL ++W++ RVSPWEIE
Sbjct: 299 KFHFESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEI 357
Query: 356 FVASAPLNLAQPAVKSKRPR-----SIDIPA 381
S + + A SKR + ++D+PA
Sbjct: 358 VGGSISVAHSLSASSSKRTKLCPQGNLDVPA 388
>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
Length = 926
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/340 (47%), Positives = 215/340 (63%), Gaps = 46/340 (13%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + +LPS++LC+V +I
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A+++TDEVYAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD------VFPIPTLGAYTKSKHPTEYFCKNLTASDT 152
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 153 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 212
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+ SMH+GVLA AAHA
Sbjct: 213 SLFVGAKRLKAGDSVLFI-----------------------------SMHIGVLAAAAHA 243
Query: 258 VKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIV 315
+ + F +YY PRT S F+I + +Y +A + SVGMRF M FE E+S +RR+TGT+V
Sbjct: 244 ASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVV 303
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
G+ D+ +WP SKWR+L+++WDE +RPERVS W+IE
Sbjct: 304 GISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 343
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ QG +VGR++D+T + Y +L + MF +QG+L +W +V+ D E D
Sbjct: 823 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 881
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S EV+ M+
Sbjct: 882 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 912
>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/374 (42%), Positives = 225/374 (60%), Gaps = 26/374 (6%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R+LW ACAGP+V +PR G + Y PQ H+ + + LP + CRVV +
Sbjct: 22 RDLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDAPV-------GLPPHVACRVVDV 74
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPR----------SPDQCLPEPPKQTVHSFCKILTA 134
EL A+ TDEVYA++ L E + E + E + +H FCK LTA
Sbjct: 75 ELCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVDGERKSRMLHMFCKTLTA 134
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +WRF+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 194
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++ +S S + L+
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLSAV 254
Query: 255 AHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
+++K ++F + Y PR S+FI+ K+L++++ F +GMRFK+++ ED ERR +G
Sbjct: 255 VNSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERR-SG 313
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKS 371
I G+ + +W GSKW+SL ++W++ R+SPWEIE S + + A S
Sbjct: 314 MITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIEIVGGSVSIAQSLSASSS 373
Query: 372 KRPR-----SIDIP 380
KR + ++D+P
Sbjct: 374 KRTKLCPQGNLDVP 387
>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
Length = 680
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 222/381 (58%), Gaps = 24/381 (6%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
+G + ELW ACAG V +PR G V Y PQ H+ L P +P ++C
Sbjct: 14 AGAVCPELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGGLAPAPP--RVPPHVVC 71
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-----------PKQTVHSF 128
RVV +EL A+ TDEVYA++ L D R+ + E K H F
Sbjct: 72 RVVDVELRADAATDEVYARLAL-VAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMF 130
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +WRF+HI+RGQP
Sbjct: 131 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQP 190
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLLTTGWS+F+ K+LV+GDA +FLRG +GELR+GVRR ++ ++ L
Sbjct: 191 RRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKL 250
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
+L+ A+++ ++F + + PR S+FI+ K+L+++++ FSVG RFK+ E ED+
Sbjct: 251 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDAN 310
Query: 307 ERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
ER F G I+G+ + WPGSKW+SL I+WD RVSPW+IE +S +
Sbjct: 311 ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTHR 369
Query: 366 QPAVKSKR------PRSIDIP 380
+ SKR P +D P
Sbjct: 370 LSSSVSKRTKLCFPPSDLDTP 390
>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
from Arabidopsis thaliana gb|AF186466 [Arabidopsis
thaliana]
Length = 1062
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 219/359 (61%), Gaps = 29/359 (8%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAGPLV +P G V YFPQGH EQ+ AS ++ +LPSK++C + +
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVT 82
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
L A+ ETDEVYAQ+TL P +Q FCK LTASDTSTHGGFSV
Sbjct: 83 LHADTETDEVYAQMTLQPVNKLN-------------RQPTEFFCKTLTASDTSTHGGFSV 129
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R+ A + PPLD ++ P QE+ AKDLH W F+HI+R GWS FV++KR
Sbjct: 130 PRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYR----------GWSVFVSTKR 179
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFI 265
L AGD+ +F+R E +L +G+RR Q ++ SSVISS SMH+G+LA AAHA S+ F
Sbjct: 180 LFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFT 239
Query: 266 VYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE- 322
+++ PR S+F++ L KY +A++ S+GMRF+M FE ED RR+ GT+ G+ D
Sbjct: 240 IFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPV 299
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPRSIDIP 380
+W GS+WR+L++ WDE RP RVS WEIEP + P + P + K PR +P
Sbjct: 300 RWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI--TPFYICPPPFFRPKYPRQPGMP 356
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 71/118 (60%), Gaps = 12/118 (10%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T GYD+L +L +MF I+GQL W +V+TD E D
Sbjct: 934 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 992
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSET 664
++L GDD W EF V+ I I S+ EV+ M S++G+ AI ++ SET
Sbjct: 993 ILLVGDDPWEEFVNCVQNIKILSSVEVQQM---------SLDGDLAAIPTTNQACSET 1041
>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
Length = 831
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 173/408 (42%), Positives = 223/408 (54%), Gaps = 71/408 (17%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + +LP++++C++
Sbjct: 28 LNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLICQL 87
Query: 82 VHIELLAEQETDEVYAQITLHP--------------ETDQTEPRSPDQCLPEP----PKQ 123
+ + A+ ETDEVYAQ+TL P + D LP KQ
Sbjct: 88 HDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQ 147
Query: 124 TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHI 183
+ FCK LTASDTSTHGGFSV R+ A PPLD T P QEL A+D+H EW+F+HI
Sbjct: 148 PTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHI 207
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISS 243
FRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+RR + Q+ MPSSV+SS
Sbjct: 208 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSS 267
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGE 303
SMH+G+LA AAHA T++ F ++Y P
Sbjct: 268 DSMHIGLLAAAAHAAATNSRFTIFYNP--------------------------------- 294
Query: 304 DSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
R+ GTI V D +WP S WRS+K+ WDE +RP RVS WEIEP
Sbjct: 295 -----RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTF--- 346
Query: 363 NLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQSSE 410
P S P + P WY G HD + + G + E
Sbjct: 347 ----PMYPSLFPLRVKHP------WYSGVASLHDDSNALMWLRGVAGE 384
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 669 LQNAMYGCLDDSSGLLQNTGENDPATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 727
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKM------VKKIFIYSTEEVK 634
MF I+GQL D+ W +VF D E D++L GDD W EF + KK +I E
Sbjct: 728 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPW-EFINIYMNVSNAKKSYIMKRREYN 786
Query: 635 NM--------ATSSKPIASSVEGEGTAISLDSEL 660
+ A K + S+ G ++ +D++L
Sbjct: 787 TLVSWFPQLIAYRGKTVLPSIICVGQSLYVDAQL 820
>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
Length = 634
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 161/343 (46%), Positives = 211/343 (61%), Gaps = 52/343 (15%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
DLY+ELW+ACAGPLV VPR GE+V Y+PQGH+EQ+EA NQ+ + P+++LPSKI C+V
Sbjct: 43 DLYKELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVYNLPSKIFCKV 102
Query: 82 VHIELLAEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++++L AE TDEV+AQITL PET Q + LP P K + SF K LT+SDTST
Sbjct: 103 INVQLKAEAGTDEVFAQITLLPETKQDVLSLKEDGNSLPLPRKADLRSFSKKLTSSDTST 162
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSVL++HA ECLPP+DM+ P Q L AKD+H
Sbjct: 163 HGGFSVLKRHAEECLPPMDMSGEPPEQMLVAKDMH------------------------- 197
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
GENGELR+G+RR S+ +SVIS+ SM G+L+ A HA+
Sbjct: 198 -----------------GENGELRIGLRRAMKLHSNASTSVISAHSMQHGILSMAFHAIT 240
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
T ++F VYY+P T ++FII ++Y+E+ +SVG F M FE E+ E+R GTIVG
Sbjct: 241 TGSIFTVYYRPWTNPTEFIIPFDQYVESAELEYSVGTTFGMLFEVEECAEQRSEGTIVGN 300
Query: 318 GDFSE-QWPGSKWRSLKIQWDEPATVQ---RPERVSPWEIEPF 356
D +WP S+WRSLK +WD AT + P+RVSPW I P
Sbjct: 301 EDVDHIRWPNSEWRSLKAKWD--ATSEGFVHPDRVSPWMIVPI 341
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKW 596
+Q K + + + TKV G A GR+VD+T GYD L EL++MF+ +G L W
Sbjct: 539 SQCKNCCSFTNLSCTKVLKHGSA-GRSVDITKFDGYDKLIRELDQMFDFKGTLIDGSSGW 597
Query: 597 AVVFTDDEGDMML 609
V + DDEGD+ML
Sbjct: 598 EVTY-DDEGDIML 609
>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
Length = 1136
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 173/370 (46%), Positives = 229/370 (61%), Gaps = 35/370 (9%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQL------EASTNQELTHQEPLF-DLPSKIL 78
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLPSKLI 103
Query: 79 CRVVHIELLAEQETDEVYAQITLHP------ETDQTEPRSPDQCLPEPPKQTVHSFCKIL 132
C + + L A+ +TDEVYAQ+TL P E Q + Q P+ + FCK L
Sbjct: 104 CLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQ-----MEFFCKTL 158
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A + PPLD ++ P QEL A+D+H W F+HI+RGQP+RHL
Sbjct: 159 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHL 218
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA 252
LTTGWS FV+ KRL AGD+ + +R E +L +G+RR Q +++ SSV+SS SMH+GVLA
Sbjct: 219 LTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLA 278
Query: 253 TAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERR 309
AAHA S+ F ++Y PR S +F+I KY +A++ + S+GMRF+M FE E+ RR
Sbjct: 279 AAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRR 338
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA-QPA 368
+ GTI G+ D + WDE A +R RVS WEIEP +AP L QP
Sbjct: 339 YMGTITGISDLD-----------PVGWDESAAGERRNRVSIWEIEP--VAAPFFLCPQPF 385
Query: 369 VKSKRPRSID 378
KRPR +D
Sbjct: 386 FGVKRPRQLD 395
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L L +MF I+GQL R + W +V+ D E D
Sbjct: 1003 RTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1061
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 1062 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1092
>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/297 (52%), Positives = 206/297 (69%), Gaps = 6/297 (2%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ ST + T Q P + +LPS++LC+V ++
Sbjct: 20 ELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPNLPSQLLCQVHNV 79
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRS-PDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+++TDE++AQ++L P + + PD L +P K FCK LTASDTSTHGGF
Sbjct: 80 TLHADKDTDEIHAQMSLQPVNSEKDVFPVPDFGL-KPSKHPSEFFCKALTASDTSTHGGF 138
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R+ A + PPLD ++ P+QEL +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 139 SVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGS 198
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
KRL AGD+ +F+R E L VGVR QQ+++PSSV+S+ SMH+GVLA AAHA +
Sbjct: 199 KRLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLSADSMHIGVLAAAAHAAGNRSP 258
Query: 264 FIVYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGV 317
F ++Y PR S F+I L K+ + V SVGMRF M FE E+S +RR+ GTIVG+
Sbjct: 259 FTIFYNPRACPSDFVIPLIKFRKTVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGI 315
>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 221/381 (58%), Gaps = 24/381 (6%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
+G + ELW ACAG V +PR G V Y PQ H+ P +P ++C
Sbjct: 14 AGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPP--RVPPHVVC 71
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-----------PKQTVHSF 128
RVV +EL A+ TDEVYA++ L D R+ + E K H F
Sbjct: 72 RVVDVELRADAATDEVYARLAL-VAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMF 130
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +WRF+HI+RGQP
Sbjct: 131 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQP 190
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLLTTGWS+F+ K+LV+GDA +FLRG +GELR+GVRR ++ ++ L
Sbjct: 191 RRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKL 250
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
+L+ A+++ ++F + + PR S+FI+ K+L+++++ FSVG RFK+ E ED+
Sbjct: 251 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDAN 310
Query: 307 ERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
ER F G I+G+ + WPGSKW+SL I+WD RVSPW+IE +S +
Sbjct: 311 ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTHR 369
Query: 366 QPAVKSKR------PRSIDIP 380
+ SKR P +D P
Sbjct: 370 LSSSVSKRTKLCFPPSDLDTP 390
>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 221/381 (58%), Gaps = 24/381 (6%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
+G + ELW ACAG V +PR G V Y PQ H+ P +P ++C
Sbjct: 14 AGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGVSAPAPP--RVPPHVVC 71
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-----------PKQTVHSF 128
RVV +EL A+ TDEVYA++ L D R+ + E K H F
Sbjct: 72 RVVDVELRADAATDEVYARLAL-VAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMF 130
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +WRF+HI+RGQP
Sbjct: 131 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQP 190
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLLTTGWS+F+ K+LV+GDA +FLRG +GELR+GVRR ++ ++ L
Sbjct: 191 RRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKL 250
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
+L+ A+++ ++F + + PR S+FI+ K+L+++++ FSVG RFK+ E ED+
Sbjct: 251 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDAN 310
Query: 307 ERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
ER F G I+G+ + WPGSKW+SL I+WD RVSPW+IE +S +
Sbjct: 311 ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTHR 369
Query: 366 QPAVKSKR------PRSIDIP 380
+ SKR P +D P
Sbjct: 370 LSSSVSKRTKLCFPPSDLDTP 390
>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
Length = 688
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/343 (45%), Positives = 209/343 (60%), Gaps = 22/343 (6%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
RELW ACAGP+V +PR G V Y PQGH L A+ + DLP + CRV +
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGH---LAAAGGGNVA-----VDLPPHVACRVADV 74
Query: 85 ELLAEQETDEVYAQITLHPETD----------QTEPRSPDQCLPEPPKQTVHSFCKILTA 134
EL A+ TDEVYA++ L E + + E + +H FCK LTA
Sbjct: 75 ELCADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKSRMLHMFCKTLTA 134
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++ S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFSCDSTKRHTLLAV 254
Query: 255 AHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
A ++K ++F + Y PR S++II +K+L++++ F +G R ++ ED ERR +G
Sbjct: 255 ADSLKHKSVFHISYNPRATASEYIIPHHKFLKSLNLPFCIGARINLQCHNEDVSERR-SG 313
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+V V + +WPGSKWRSL ++W++ +RVSPWEIE
Sbjct: 314 MVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIE 356
>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/508 (36%), Positives = 265/508 (52%), Gaps = 46/508 (9%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G +G + ELW ACAGP V +PR G V Y PQ H+ A+ + +P
Sbjct: 12 GETAGAVCGELWHACAGPGVALPRRGSAVVYLPQAHL----AAGGGDAPAPAGRAHVPPH 67
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTV----------- 125
+ CRVV +EL A+ TDEVYA++ L E + ++ E +
Sbjct: 68 VACRVVGVELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMAAGDGENKPRMP 127
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H FCK LTASDTSTHGGFSV R+ A +C LD P+QEL AKDLHG +WRF+HI+R
Sbjct: 128 HMFCKTLTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHGTQWRFRHIYR 187
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQS 245
GQPRRHLLTTGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++ +++
Sbjct: 188 GQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRNEALFEAVNTND 247
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGE 303
L L+ A +++ ++F V + PR+ S+FI+ ++ ++++H FS+GMRFK+ E +
Sbjct: 248 SKLHTLSAVASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHTFSIGMRFKVSNESD 307
Query: 304 DSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
D+ ER TG I G+ + +WP SKWR L ++WD+ RVSPWEIE S +
Sbjct: 308 DANERS-TGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPWEIERVGGSISV 366
Query: 363 NLAQPAVKSKRPR------SIDIPA--------SASAFWYQGSTQSHDI---TQVVGATE 405
A SKR + ++D P S A + Q ++ ++ GA
Sbjct: 367 TDCLSASSSKRAKLYFPQGNLDAPVTDGNGCLDSMEAGNFHRVLQGQELLMGSRTQGAGR 426
Query: 406 GQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERG 465
QS + RP + + N + QS Y SSG G +V EV +G
Sbjct: 427 SQSPDVARFRPPDHIRCSANVRN--------YIPQQSSEFPYHSSGF-GESVRFSEVLQG 477
Query: 466 KKSEASLGCWL-FGIDLKHNSNTAAPLG 492
++ +L + D + A P G
Sbjct: 478 QEMSQALRFYQGSAFDARTQHGGAGPFG 505
>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
Length = 680
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 221/381 (58%), Gaps = 24/381 (6%)
Query: 20 SGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILC 79
+G + ELW ACAG V +PR G V Y PQ H+ P +P ++C
Sbjct: 14 AGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPP--RVPPHVVC 71
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-----------PKQTVHSF 128
RVV +EL A+ TDEVYA++ L D R+ + E K H F
Sbjct: 72 RVVDVELRADAATDEVYARLAL-VAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMF 130
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
CK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +WRF+HI+RGQP
Sbjct: 131 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQP 190
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RRHLLTTGWS+F+ K+LV+GDA +FLRG +GELR+GVRR ++ ++ L
Sbjct: 191 RRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKL 250
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
+L+ A+++ ++F + + PR S+FI+ K+L+++++ FSVG RFK+ E ED+
Sbjct: 251 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDAN 310
Query: 307 ERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
ER F G I+G+ + WPGSKW+SL I+WD RVSPW+IE +S +
Sbjct: 311 ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVLVTHR 369
Query: 366 QPAVKSKR------PRSIDIP 380
+ SKR P +D P
Sbjct: 370 LSSSVSKRTKLCFPPSDLDTP 390
>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1092
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/341 (48%), Positives = 226/341 (66%), Gaps = 11/341 (3%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPLV +P G V YFPQGH EQ+ AS N+E +LPSK++C +
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICML 78
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
++ L A+ ETDEVYAQ+TL P + ++ + D L + +Q FCK LTASDTST
Sbjct: 79 HNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQS-RQPAEFFCKTLTASDTST 137
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
HGGFSV R+ A + PPL+M + L + +H IF GQP+RHLLTTGWS
Sbjct: 138 HGGFSVPRRAAEKIFPPLNMNMNVVI--LISLQIHK---NVHCIFSGQPKRHLLTTGWSV 192
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV++KRL AGD+ +F+R E +L +G+RR QQ ++ SSVISS SMH+G+LA+AAHA
Sbjct: 193 FVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAA 252
Query: 260 TSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
++ F ++Y PR S+F+I L KY +A++ S+GMRF+M FE E+S RR+ GTI G+
Sbjct: 253 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI 312
Query: 318 GDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
D S +W S+WR+L++ WDE A +RP RVS WE+EP V
Sbjct: 313 SDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 353
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR +D+T KGYD+L +L +MF I+GQL R W +V+ D E D
Sbjct: 965 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1023
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1024 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1054
>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 632
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/324 (46%), Positives = 203/324 (62%), Gaps = 15/324 (4%)
Query: 66 HQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR-----SPDQC---- 116
H + +P + CRVV + L A+ TDEVYAQ++L + ++ + R S + C
Sbjct: 25 HLTAVAAVPPHVFCRVVDVNLQADPATDEVYAQVSLLVDNEEAKRRMRQGESEEACDGDG 84
Query: 117 ----LPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKD 172
+ + H FCK LTASDTSTHGGFSV R+ A +C PPLD L P+QEL AKD
Sbjct: 85 EDTGAAKRRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKD 144
Query: 173 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQ 232
LHG EWRF+HI+RGQPRRHLLTTGWS FV K+LV+GDA +FLRGE+G L++GVRR A
Sbjct: 145 LHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQL 204
Query: 233 QSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCF 290
++ P + +Q L L AHAV ++F +YY PR S+FI+ K++ + F
Sbjct: 205 KNVSPFPALFNQDSSLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPF 264
Query: 291 SVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSP 350
SVGMRFKM++E ED+ ERR TG I G + + GSKW+ L ++WD+ +R RVSP
Sbjct: 265 SVGMRFKMKYENEDASERRSTGMITGSRESDLKSHGSKWKCLVVRWDDDVECRRLNRVSP 324
Query: 351 WEIEPFVASAPLNLAQPAVKSKRP 374
WEIE + + +L+ P K +P
Sbjct: 325 WEIELAGSVSGSHLSSPHSKRLKP 348
>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 683
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 229/401 (57%), Gaps = 32/401 (7%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
RELW ACAGP+V +PR G V Y PQGH+ LP ++CRV +
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 85 ELLAEQETDEVYAQITLHPETD----------QTEPRSPDQCLPEPPKQTVHSFCKILTA 134
EL A+ TDEV A++ L E + + E +H FCK LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 255 AHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
A ++K ++F + Y PR S++II K+L++++H +G R + ED ERR +G
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SG 313
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKS 371
+V + + +WPGSKWRSL ++W++ A +RVSPWEIE S ++ + A S
Sbjct: 314 VVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIAGGSVSVSHSLSASSS 373
Query: 372 KRPR-----SIDIPASASAFWYQGSTQSHDITQVVGATEGQ 407
KR + ++D+PA + G T S + ++ +GQ
Sbjct: 374 KRTKLCPQGNLDVPA-----MWNGCTDSMETGKLPRVLQGQ 409
>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
Length = 658
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/298 (50%), Positives = 196/298 (65%), Gaps = 15/298 (5%)
Query: 92 TDEVYAQITLHPETDQTEPRSPD-----QCLPEP------PKQTVHSFCKILTASDTSTH 140
TDEVYAQ++L + ++ E R + C E P + H FCK LTASDTSTH
Sbjct: 40 TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTH 99
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R+ A +C PPLD +L P QEL AKDLHG EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 100 GGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGF 159
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKT 260
+ K+LV+GDA +FLRGE+GELR+GVRR A +++ P + +Q + L+ AHAV
Sbjct: 160 INKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAV 219
Query: 261 STLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
++F +YY PR SQ FII K++ + FSVGMRFK+R+E ED+ ERR TG I+G
Sbjct: 220 KSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGSR 279
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRS 376
+ W GSKW+ L ++WD+ +RP VSPWEIE + + +L+ P SKR +S
Sbjct: 280 EADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP--HSKRLKS 335
>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
Length = 330
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/347 (44%), Positives = 207/347 (59%), Gaps = 58/347 (16%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +EAST +EL +P DLPSK+ CRV+
Sbjct: 1 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 60
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ----TVHSFCKILTASDTS 138
I L E +DE Y +ITL P+T T ++ +P + V+SF K+LTASDTS
Sbjct: 61 AIHLKVENNSDETYVEITLMPDT--TVSKNLQVVIPTENENQFRPIVNSFTKVLTASDTS 118
Query: 139 THGGFSVLRKHATECLPPL-----DMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
G FSV KHA ECLPPL DM+ P QEL A DLHG +WRFKH +R
Sbjct: 119 AQGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYR-------- 170
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
GD VF R + +SM GV+A+
Sbjct: 171 ---------------GDVIVFAR------------------------YNIESMRHGVIAS 191
Query: 254 AAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
A HA +FI+ YKPR+SQ+I+ K+L+AV++ F+VG ++ MRFE +D E R+ GT
Sbjct: 192 AKHAFDNQCMFIMVYKPRSSQYIVSHEKFLDAVNNKFNVGSKYTMRFEDDDLSETRYFGT 251
Query: 314 IVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
I+G+ DFS W S+WRSL++QWDE A+ RP++VSPW+I+ ++S+
Sbjct: 252 IIGISDFSPHWKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMSSS 298
>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
Length = 686
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 204/343 (59%), Gaps = 22/343 (6%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
RELW ACAGP+V +PR G V Y PQGH+ LP ++CRV +
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 85 ELLAEQETDEVYAQITLHPETD----------QTEPRSPDQCLPEPPKQTVHSFCKILTA 134
EL A+ TDEV A++ L E + + E +H FCK LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 255 AHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
A ++K ++F + Y PR S++II K+L++++H +G R + ED ERR +G
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SG 313
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+V + + +WPGSKWRSL ++W++ A +RVSPWEIE
Sbjct: 314 VVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 393
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 204/343 (59%), Gaps = 22/343 (6%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
RELW ACAGP+V +PR G V Y PQGH+ LP ++CRV +
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 85 ELLAEQETDEVYAQITLHPETD----------QTEPRSPDQCLPEPPKQTVHSFCKILTA 134
EL A+ TDEV A++ L E + + E +H FCK LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 255 AHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
A ++K ++F + Y PR S++II K+L++++H +G R + ED ERR +G
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SG 313
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+V + + +WPGSKWRSL ++W++ A +RVSPWEIE
Sbjct: 314 VVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
Length = 552
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 202/343 (58%), Gaps = 57/343 (16%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +P+ G V YFPQGH+EQ Q ++ LP + CR++ ++
Sbjct: 51 ELWHACAGPLISLPKRGSLVLYFPQGHLEQ------QAPGFSAAIYGLPPHVFCRILDVK 104
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR----------SPDQCLPEPPKQ--TVHSFCKILT 133
L AE +TDEVYAQ++L PE++ E + DQ E K+ T H FCK LT
Sbjct: 105 LHAETDTDEVYAQVSLLPESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTPHMFCKTLT 164
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSV R+ A +C PPLD + P+QEL A+DLHG EWRF+HI+RGQPRRHLL
Sbjct: 165 ASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRGQPRRHLL 224
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV K+LV+GDA +FLRG++G+LR+GVRR + + + S +Q+ + +
Sbjct: 225 TTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASAFSAQYNQNTNHNNFSE 284
Query: 254 AAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGT 313
AHA+ T++ F +YY P++ G
Sbjct: 285 VAHAISTNSAFNIYYNPKS--------------------------------------LGI 306
Query: 314 IVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
I G+ D +WPGSKWR L ++WD+ + +RVSPWEIEP
Sbjct: 307 ITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEP 349
>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
Length = 811
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/306 (52%), Positives = 209/306 (68%), Gaps = 11/306 (3%)
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
ASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 1 ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT 253
TTGWS FV K LV+GDA +FLR ENGELR+G+RR + QQS +PSSV+SSQSMHLGVLA
Sbjct: 61 TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120
Query: 254 AAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
AA+AV T ++F ++Y PR S +FII KY+++ S+GMRFKMRFE ED+ ERR+T
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQPLSIGMRFKMRFETEDAAERRYT 180
Query: 312 GTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
G I G+GD +WPGSKWRSL + WDE A ++ ERVSPWEIEP ++ + L++ P+
Sbjct: 181 GIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPSISVSGLSI--PSCS 238
Query: 371 SKRPRSIDIPASASAFWYQGSTQSHDITQVV---GATEGQSSESQVVRPMRQKEIDSTII 427
+ ++P++ F + +D + V +GQ S P R +D +I
Sbjct: 239 RIKRLRTNLPSTPVDFSVPDGGRLYDFGESVRFQKVLQGQEMMS-FKTPFRNDGVD--LI 295
Query: 428 NNNSTD 433
N +++
Sbjct: 296 KNQASE 301
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDE 604
AS R+ TKV QG AVGRAVDL+ L GYD+L ELE++F ++G L DK W VV+TD E
Sbjct: 667 ASGRSCTKVHKQGNAVGRAVDLSKLDGYDELISELERLFNMEGLLNDPDKGWQVVYTDSE 726
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVK 634
DMML GDD W EFC +V KI IY+ EE+K
Sbjct: 727 DDMMLVGDDPWQEFCNIVCKILIYTHEELK 756
>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
Length = 687
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 210/343 (61%), Gaps = 18/343 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP V +PR G + Y PQ H L A +P + CRVV +E
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAH---LAADGGGGEVPPAGAAAVPPHVACRVVGVE 79
Query: 86 LLAEQETDEVYAQITLHPETDQTE-----------PRSPDQCLPEPPKQTVHSFCKILTA 134
L A+ TDEVYA++ L E + + + C E + H FCK LTA
Sbjct: 80 LRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTA 139
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD P+QEL A DLHG +W+F+HI+RGQPRRHLLT
Sbjct: 140 SDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLT 199
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
GWS+FV K+LV+GDA +FLRG++G+LR+GVRR ++ ++S L +L++
Sbjct: 200 IGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSV 259
Query: 255 AHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
A +++ ++F + + PR+ S+FI+ + L++++H FS+GMRF++ +E ED+ ER G
Sbjct: 260 ASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANERS-AG 318
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
I G+ + +WPGS+W+ L ++WD+ RVSPWEIE
Sbjct: 319 LISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 361
>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
Length = 676
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 210/360 (58%), Gaps = 16/360 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP V +PR G + Y PQGH+ + P+ P + CRV+ +E
Sbjct: 26 ELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGEVAGAAPPV---PPHVACRVLDVE 82
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE---------PPKQTVHSFCKILTASD 136
L A+ TDEVYA++ L + + E + H FCK LTASD
Sbjct: 83 LCADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPRMPHMFCKTLTASD 142
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +WRF+HI+RGQPRRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHLLTTG 202
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS+FV K+LV+GDA +FLRG +GELR+G+RR ++ ++S L+ A
Sbjct: 203 WSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQRTLSAVAS 262
Query: 257 AVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTI 314
+ + + F V + PR+ S+FI+ K+ ++++H S+GMRFK+ +E ED+ ER TG I
Sbjct: 263 SFRNRSTFHVCFDPRSGASEFIVPYWKFSKSLNHPLSIGMRFKLSYESEDANERS-TGMI 321
Query: 315 VGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
GV + +WPGSKWR L ++WD R+SPWEIE + + A SKR
Sbjct: 322 SGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIERVGGMNSVTHSLSASNSKR 381
>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
Length = 1183
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/337 (47%), Positives = 205/337 (60%), Gaps = 48/337 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPLV +P G V YFPQGH EQ
Sbjct: 93 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQ------------------------------ 122
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
A+ ETDEVYAQ+TL P D+ + D L + +Q V FCK LTASDTSTHGGFSV
Sbjct: 123 --ADAETDEVYAQMTLQP-YDKEALLASDLGLKQS-RQPVEFFCKTLTASDTSTHGGFSV 178
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R+ A + PPLD ++ P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV++KR
Sbjct: 179 PRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKR 238
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFI 265
L AGD+ +F+R E +L +G+RR QQ ++ SSVIS SMH+G+LA AAHA ++ F
Sbjct: 239 LFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSPFT 298
Query: 266 VYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQ 323
++Y PR S+F+I L KY +A++ S+GMRF+M FE E+S RR+ GTI G+
Sbjct: 299 IFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGI------ 352
Query: 324 WPGSKWRSL---KIQWDEPATVQRPERVSPWEIEPFV 357
S+ R K +P+ +RP RVS WEIEP V
Sbjct: 353 ---SELRCCAMEKFTMAQPSAGERPSRVSIWEIEPVV 386
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTD 602
A RT TKVQ +G +VGR++D+T KGYD+L +L +MF I+GQL R W +V+ D
Sbjct: 1052 AQRMRTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVD 1110
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
E D++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1111 HENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1145
>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 630
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 207/346 (59%), Gaps = 57/346 (16%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST-NQELTHQE-PLFDLPSKILCR 80
LY ELW+ACAG V VPR E V YFPQGH+EQ+ A T +Q+ H E P++DLPSKILC+
Sbjct: 21 LYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHMEIPVYDLPSKILCK 80
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPR----SPDQCLPEPPKQTVHSFCKILTASD 136
++HIEL AE +DEVYAQ+TL P Q R DQ P T ++F KILT SD
Sbjct: 81 IMHIELKAEAFSDEVYAQVTLVPALKQDNLRLEVEENDQI---PSITTTYTFSKILTPSD 137
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
TSTHGGFSV +KHA EC PPLDMT TP QE+ AKDL+G
Sbjct: 138 TSTHGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNG--------------------- 176
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS--SMPSSVISSQSMHLGVLATA 254
E+GE+RVG+RR S S SS+IS SM LG+LA+A
Sbjct: 177 --------------------AESGEIRVGIRRATEHLSNVSQSSSLISGHSMQLGILASA 216
Query: 255 AHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
+HAV + T+FIVYY P T+ +FI+ L YL++ + +GMR +M+ E E+S RR G
Sbjct: 217 SHAVSSGTMFIVYYHPWTNPFEFIVPLRTYLKSTVPDYPIGMRVQMQHEVEES-LRRHAG 275
Query: 313 TIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQ-RPERVSPWEIEPF 356
TI+G D + +WPGS+WR LK+QWD + PERV PW IEP
Sbjct: 276 TIIGHEDIDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIEPL 321
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVV 599
K+ + R+ TKV G A+GRAVDL GY +L EL+ MFE +G L W V
Sbjct: 523 KKCHRVNNRSCTKVLKLGTALGRAVDLARFHGYTELIAELDSMFEFRGSLINESSGWHVT 582
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
DD+GDMM GD W +F +V+K+ I E N+ SS SS+
Sbjct: 583 CMDDDGDMMQLGDYPWQDFQGVVQKMIICPKEGTNNIKPSSSANPSSL 630
>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
Length = 744
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 219/353 (62%), Gaps = 27/353 (7%)
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPE-----TDQTEPRSPD--QCLPEPP---KQTV 125
+I+CRVV ++L AE DE+YAQ++L E D++ RS + + + E ++T+
Sbjct: 1 QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60
Query: 126 -HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIF 184
H FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDL+G+ WRF+HI+
Sbjct: 61 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIY 120
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQ-QSSMPSSVISS 243
RGQPRRHLLTTGWS+F K+L GDA +FLR ++GELR+G+RR Q Q +P + +
Sbjct: 121 RGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLC 180
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFE 301
Q + +L+ A A+ LF +YY PR S +F++ KYL + H FS+GMR K+R E
Sbjct: 181 QLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVE 240
Query: 302 GEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE--PFVA 358
ED+ E+R+TG I GVGD +WP SKWR L ++WD+ A +RVSPWEIE V+
Sbjct: 241 TEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSLVS 300
Query: 359 SAPLNLAQPAVKSKRPRS------IDIPASASAFWYQGSTQSHDITQVVGATE 405
S L SKRP+ DIP + GST+S +V+ E
Sbjct: 301 SFSFPLKS---TSKRPKMNFPSIITDIPLPDGS-GLSGSTESSRFQKVLQGQE 349
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 547 STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEG 605
STR TKV Q VGRAVDLT L GYDDL ELE++ +++G LR PR W VV+TD+
Sbjct: 636 STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELERLLDMEGLLRDPRKGWQVVYTDNVS 695
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
DMML GD+ W EFC +V KI I++ EEV
Sbjct: 696 DMMLVGDEPWQEFCDIVSKIHIFTREEV 723
>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
Length = 1474
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 151/309 (48%), Positives = 207/309 (66%), Gaps = 10/309 (3%)
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LPSK++C + ++ L A+ ET+EVYAQ+TL P + D+ + D L + +Q FC
Sbjct: 353 NLPSKLICMLQNVTLNADPETEEVYAQMTLQPVNKYDRDALLASDMGL-KINRQPNEFFC 411
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LTASDTSTHGGFSV R+ A + P LD ++ P QEL AKD+H W F+HIFRGQP+
Sbjct: 412 KTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRGQPK 471
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLG 249
RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+RR QQ ++ SSVISS SMH+G
Sbjct: 472 RHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMHIG 531
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
VLA AAHA ++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE E+
Sbjct: 532 VLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGV 591
Query: 308 RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
RR+ GT+ G+ D +W S+WR+L+I WDE A RP RVS W+IEP + P +
Sbjct: 592 RRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--TPFYICP 649
Query: 367 PAVKSKRPR 375
P RPR
Sbjct: 650 PPF--FRPR 656
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 131/195 (67%), Gaps = 7/195 (3%)
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISS 243
F GQP+RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+RR QQ ++ SSVISS
Sbjct: 114 FLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISS 173
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFE 301
SMH+GVLA AAHA ++ F ++Y PR ++F++ L KY +A++ S+GMRF+M FE
Sbjct: 174 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFE 233
Query: 302 GEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASA 360
E+ RR+ GT+ G+ D +W S+WR+L+I WDE A RP RVS W+IEP +
Sbjct: 234 TEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--T 291
Query: 361 PLNLAQPAVKSKRPR 375
P + P RPR
Sbjct: 292 PFYICPPPF--FRPR 304
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
++ ELW ACAGPL+ +P G V YFPQGH EQ+ AS ++ +LPSK++C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 82 VHIELLAEQETDEVYAQITLHP 103
++ L A+ ET+EVYAQ+TL P
Sbjct: 80 QNVTLNADPETEEVYAQMTLQP 101
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL W +V+ D E D
Sbjct: 1347 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVYVDHEND 1405
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 1406 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1436
>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
Length = 816
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 227/375 (60%), Gaps = 32/375 (8%)
Query: 88 AEQETDEVYAQITLHPETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
A+ ETDEVYAQ+TL P + Q E P + L P +Q + FCK LTASDTSTHGGFSV
Sbjct: 3 ADAETDEVYAQMTLQPLSAQELKEAYLPAE-LGTPSRQPTNYFCKTLTASDTSTHGGFSV 61
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R+ A + PPLD ++ P QEL A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 62 PRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 121
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFI 265
LVAGDA +F+ E +L +G+RR + Q+ MPSSV+SS SMHLG+LA AAHA T + F
Sbjct: 122 LVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRFT 181
Query: 266 VYYKPRT--SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGT----IVGVG 318
+++ PR S+F+I L KY++AV+H SVGMRF+M FE E+ + F T + V
Sbjct: 182 IFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEN---QVFVATWAQSLALVT 238
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W S WRS+K+ WDE +R +VS WEIEP + + P+ + ++ KRP
Sbjct: 239 WIPVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEP-LTTFPMYPSPFPLRLKRPWPTG 297
Query: 379 IPA----------SASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIIN 428
+P+ ++ W +G I + G V P Q +D +++
Sbjct: 298 LPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAG-------VSPWMQPRLDPSMMG 350
Query: 429 NNSTDDHRIVAAQSV 443
S D ++++A ++
Sbjct: 351 MQS-DMYQVMATAAL 364
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G R++D+T Y +L EL +MF ++G+L R W +VF D E D+
Sbjct: 684 TFVKVHKSG-TYSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDRENDV 742
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
+L GD WPEF V I I S EEV++M + +SV
Sbjct: 743 LLLGDGPWPEFVNSVWCIKILSPEEVQDMGKRGLELLNSV 782
>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
Length = 679
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 211/390 (54%), Gaps = 85/390 (21%)
Query: 18 PGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKI 77
P + + ELW ACAGP++ +P+ G V YFPQGH+E + Q+L Q L ++P +
Sbjct: 36 PSASSVCLELWHACAGPMICLPKKGSVVVYFPQGHLELV-----QDL--QLLLPNIPPHV 88
Query: 78 LCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-----------PKQTVH 126
CRVV ++L AE+ +DEVY Q+ L PE++Q + + + + T H
Sbjct: 89 FCRVVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTPH 148
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
FCK LTASDTSTHGGFSV R+ A +C PPLD + P+QEL AKDLHG EW+F+HI+RG
Sbjct: 149 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRG 208
Query: 187 --------QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS 238
QPRRHLLTTGWS FV K+LV+GDA +FLR + E V + +
Sbjct: 209 VSLMSHVWQPRRHLLTTGWSGFVNKKKLVSGDAVLFLRASSSEFIVPIHKF--------- 259
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKM 298
L+++ + +S GMRF+M
Sbjct: 260 --------------------------------------------LKSLDYSYSAGMRFRM 275
Query: 299 RFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF- 356
RFE +D+ ERR G IVG+ D +WPGSKW+ L ++WD+ R RVSPWEIEP
Sbjct: 276 RFETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDD-LEATRNNRVSPWEIEPSG 334
Query: 357 VASAPLNLAQPAVKSKRPRSIDIPASASAF 386
AS P NL ++K R I +P++ F
Sbjct: 335 SASIPNNLMAASLKRTR---IGLPSTQLEF 361
>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
Length = 975
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 211/357 (59%), Gaps = 43/357 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPLV +P G V YFPQGH EQ D + +
Sbjct: 36 ELWHACAGPLVSLPPAGSLVVYFPQGHSEQF--------------LD---------IKLT 72
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
+ +Q E L L +P QT FCK LTASDTSTHGGFSV
Sbjct: 73 VNGDQYGKEALQLSEL--------------ALKQPRPQT-EFFCKTLTASDTSTHGGFSV 117
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R+ A + PPLD ++ P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KR
Sbjct: 118 PRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKR 177
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFI 265
L+AGD+ +F+R E +L +G RR Q +++ SSV+SS SMH+G+LA AAHA ++ F
Sbjct: 178 LLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFT 237
Query: 266 VYYKPRTS--QFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE 322
++Y PR S +F++ KY +A++ + S+GMRF+M FE E+ RR+ GTI G+ D
Sbjct: 238 IFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDP 297
Query: 323 -QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W S+WR++++ WDE A +R RVS WEIEP VA+ P SKRPR +D
Sbjct: 298 VRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEP-VAAPFFICPPPFFGSKRPRQLD 353
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF ++GQL R + W +V+ D E D
Sbjct: 842 RTFTKVYKRG-AVGRSIDISQFSGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 900
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF VK I I S +EV+ ++
Sbjct: 901 ILLLGDDPWEEFVNCVKCIRILSPQEVQQIS 931
>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
Length = 973
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/338 (43%), Positives = 192/338 (56%), Gaps = 68/338 (20%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW ACAGPLV +P+ G VYYFPQGH EQ+ A+T + + P + +LPS++LC+V +I
Sbjct: 39 ELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQVHNI 98
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP-------PKQTVHSFCKILTASDT 137
L A+++TDEVYAQ+TL P +T+ P P K FCK LTASDT
Sbjct: 99 TLHADKDTDEVYAQMTLQPVNSETD------VFPIPTLGAYTKSKHPTEYFCKNLTASDT 152
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
STHGGFSV R+ A + P LD ++ P QEL +DLH W F+HI+RGQP+RHLLTTGW
Sbjct: 153 STHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGW 212
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
S FV +KRL AGD+ +F+R + V R
Sbjct: 213 SLFVGAKRLKAGDSVLFIRTSPSPFVIPVAR----------------------------- 243
Query: 258 VKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGV 317
Y +A + SVGMRF M FE E+S +RR+TGT+VG+
Sbjct: 244 ------------------------YNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGI 279
Query: 318 GDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
D+ +WP SKWR+L+++WDE +RPERVS W+IE
Sbjct: 280 SDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 317
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTDDEGD 606
RT TKVQ QG +VGR++D+T + Y +L + MF +QG+L +W +V+ D E D
Sbjct: 797 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 855
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W EF V+ I I S EV+ M
Sbjct: 856 VLLVGDDPWEEFINCVRCIRILSPSEVQQM 885
>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
gi|238014578|gb|ACR38324.1| unknown [Zea mays]
gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 340
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 189/321 (58%), Gaps = 22/321 (6%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
RELW ACAGP+V +PR G V Y PQGH+ LP ++CRV +
Sbjct: 23 RELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAAD--------LPPHVVCRVADV 74
Query: 85 ELLAEQETDEVYAQITLHPETD----------QTEPRSPDQCLPEPPKQTVHSFCKILTA 134
EL A+ TDEV A++ L E + + E +H FCK LTA
Sbjct: 75 ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +W+F+HI+RGQPRRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
TGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++ +S S L
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254
Query: 255 AHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTG 312
A ++K ++F + Y PR S++II K+L++++H +G R + ED ERR +G
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SG 313
Query: 313 TIVGVGDFSE-QWPGSKWRSL 332
+V + + +WPGSKWRSL
Sbjct: 314 VVVRISEIDPMKWPGSKWRSL 334
>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/395 (41%), Positives = 211/395 (53%), Gaps = 45/395 (11%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G L +LW ACAG +V++P G +V YFPQGH EQ AST + P +P CR
Sbjct: 25 GGLDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQ-AASTPEFPRTLVPNGSVP----CR 79
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
VV + LA+ ETDEV+A+I L PE + D L PP + SF K LT SD +
Sbjct: 80 VVSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSDANNG 139
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFS+ R A PPLD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 140 GGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTF 199
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRR-------------------LAHQQSSMPSSVI 241
V K+LVAGDA VFLR +GEL VGVRR + ++ SS+
Sbjct: 200 VNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYALNSSIR 259
Query: 242 S---------------SQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLE 284
S ++ VL AA AV +VYY PR T++F +
Sbjct: 260 SENQGSPTTSSFARDRARVTAKSVLEAAALAVSGERFEVVYY-PRASTAEFCVKAGLVKR 318
Query: 285 AVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATV 342
A+ + GMRFKM FE EDS F GTI V WP S WR L++ WDEP +
Sbjct: 319 ALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVTWDEPDLL 378
Query: 343 QRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSI 377
Q RVSPW++E VA+ P+ L ++ K+ R++
Sbjct: 379 QGVNRVSPWQLE-LVATLPMQLPPVSLPKKKLRTV 412
>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
Length = 1096
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/367 (44%), Positives = 216/367 (58%), Gaps = 38/367 (10%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHI 84
ELW+ACAGPLV +P G V YFPQGH EQ+ AS +++ Q P + +LPS++LC + ++
Sbjct: 29 ELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCILHNV 88
Query: 85 ELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
L A+ ETDEVYAQ+TL P D+ D L QT FCK LTASDTSTHGG
Sbjct: 89 TLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQT-DFFCKTLTASDTSTHGG 147
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R+ A + PPLD ++ P QEL AKDLH W F+HI+RG
Sbjct: 148 FSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRG---------------- 191
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
R E +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA ++
Sbjct: 192 -------------RDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 238
Query: 263 LFIVYYKPRT--SQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
F V+Y PR S+F+I L KY +A + + S+GMRF+M FE E+S RR+ GTI G+ D
Sbjct: 239 PFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISD 298
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSID 378
+W S+WR+L++ WDE +R RVS WEIEP A P +SKRPR
Sbjct: 299 LDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPF-FICPPPFFRSKRPRQPG 357
Query: 379 IPASASA 385
+P S+
Sbjct: 358 MPDDESS 364
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGDMMLA 610
KV +G AVGR++D+T GYD+L +L + F I+GQL R + W +V+ D E D++L
Sbjct: 988 KVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 1046
Query: 611 GDDQWPEFCKMVKKIFIYSTEEVKNMA 637
GDD W EF V+ I I S +EV+ M+
Sbjct: 1047 GDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
Length = 1031
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 196/297 (65%), Gaps = 11/297 (3%)
Query: 88 AEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
A+ +TDEVYA++TL P + D+ + + L + QT FCK LTASDTSTHGG
Sbjct: 3 ADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQT-EFFCKTLTASDTSTHGG 61
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R+ A P LD ++ P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 62 FSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 121
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTST 262
KRL+AGD+ +F+R +L +G+RR Q +++ SSV+SS SMH+G+LA AAHA ++
Sbjct: 122 GKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 181
Query: 263 LFIVYYKPR--TSQFIIGLNKYLEAVH-HCFSVGMRFKMRFEGEDSPERRFTGTIVGVGD 319
F +YY PR TS+F+I KY +AV+ + S+GMRF+M FE E+S RR+ GTI G+ D
Sbjct: 182 QFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISD 241
Query: 320 FSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPR 375
+W S WR++++ WDE A +R RVS WEIEP +A + P +KRPR
Sbjct: 242 LDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFI-YPSPLFTAKRPR 297
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GYD+L ++ +MF I+GQL +++ W +V+ D E D
Sbjct: 913 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 971
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
++L GDD W +F K V+ I I S +E M
Sbjct: 972 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1001
>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
Length = 671
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 216/688 (31%), Positives = 317/688 (46%), Gaps = 98/688 (14%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E + S + H F +P+ I C+V
Sbjct: 8 LDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSV--DFGH----FQIPALIPCKVS 61
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQC-------LPE--PPKQTVHSFCKILT 133
I+ +AE ETDEVYA+I L P ++ ++ D C LP ++ SF K LT
Sbjct: 62 AIKYMAEPETDEVYAKIRLTPSSN-SDLMFGDGCGEDSDDRLPNGIESQEKPASFAKTLT 120
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 180
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR------------------------L 229
TTGWS FV K+LVAGD+ VFLR ENG+L VG+RR L
Sbjct: 181 TTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGWNSFGGYSGFL 240
Query: 230 AHQQSSMP----SSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYL 283
+S + + + + V+ A+ A +VYY PR S +F + +
Sbjct: 241 REDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYY-PRASTPEFCVRASAVR 299
Query: 284 EAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE--QWPGSKWRSLKIQWDEPA 340
A+H + GMRFKM FE EDS F GTI V F++ +WP S WR L++ WDEP
Sbjct: 300 TAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSV-QFADPIRWPNSPWRLLQVAWDEPD 358
Query: 341 TVQRPERVSPWEIE-----PFVASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSH 395
+Q +RVSPW E P + +P + + ++ +P + + G
Sbjct: 359 LLQNVKRVSPWLAELVSNMPAIHLSPFSPPRKKLRLPQPPDFPLLGQIPMPSFTGIPLRS 418
Query: 396 DITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNS-------TDDHRIVAAQSVLSGYA 448
+ + + ++ + Q R Q E+ S+ ++ N D R A S S +
Sbjct: 419 N-SPLCCVSDNIPAGIQGAR-HAQFELSSSDLHFNKLQSGLFPVDFQRRDHAASP-SRIS 475
Query: 449 SSGRPGNTVIHEEVERGKKSEASLGCWLF----GIDLKHNSNTAAP----LGRKVV---- 496
S GNT KKSE ++ C L LK +S T P G+ +V
Sbjct: 476 SGNFMGNT---------KKSE-NISCLLTMGNSSQSLKESSETKTPHFVLFGQLIVTDQQ 525
Query: 497 -------DPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTR 549
D +S +A+SD S Q ++ + S +++
Sbjct: 526 SSQSCSGDTNANSSSDGNLGKASSDGSGSALQQNGPMENSSDERSTWYKDHQKTDLGLET 585
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMML 609
KV ++ +GR +DL+ L Y++L +L MF I+ + V++ D G
Sbjct: 586 DHCKVFLESEDIGRTLDLSVLGSYEELHRKLASMFGIESSEMLSN---VLYRDAAGATKH 642
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
AGD+ + EF K +++ I S N
Sbjct: 643 AGDEPFSEFLKTARRLTILSYASRDNFG 670
>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 537
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/270 (47%), Positives = 178/270 (65%), Gaps = 9/270 (3%)
Query: 119 EPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW 178
E + +H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +W
Sbjct: 2 ERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKW 61
Query: 179 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS 238
RF+HI+RGQPRRHLLTTGWS+FV K+LV+GDA +FLRG++GELR+GVRR ++
Sbjct: 62 RFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALL 121
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRF 296
+S S + L+ A+++K ++F + Y PR S+FII K+L++++ F +GMRF
Sbjct: 122 KAFNSNSSKIHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLNRPFCIGMRF 181
Query: 297 KMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEP 355
K+++ ED ERR +G I G+ D +W GSKW+SL ++W++ R+SPWEIE
Sbjct: 182 KIQYGSEDVNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIEI 240
Query: 356 FVASAPLNLAQPAVKSKRPR-----SIDIP 380
S + + A SKR + ++D+P
Sbjct: 241 VGGSVSIAQSLSASSSKRTKLCPQGNVDVP 270
>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
Length = 188
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/180 (68%), Positives = 139/180 (77%)
Query: 7 NFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTH 66
+ S SS G + LY+ELW ACAGPLV VPR ERVYYFPQGH+EQLEAS +Q L
Sbjct: 3 SLNSSYSSLVGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQ 62
Query: 67 QEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH 126
+ P F+LPSKILC+VV++ L AE ETDEVYAQ+TL PE DQ+E SPD LPEP TVH
Sbjct: 63 KMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVH 122
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SFCK LTASDTSTHGGFSVLR+HA ECLPPLDM+ P QEL AKDLHG EW F+HIFRG
Sbjct: 123 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182
>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
Length = 585
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 172/268 (64%), Gaps = 10/268 (3%)
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
K H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +WRF+
Sbjct: 29 KHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 88
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQPRRHLLTTGWS+F+ K+LV+GDA +FLRG +GELR+GVRR ++ +
Sbjct: 89 HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAV 148
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMR 299
+ L +L+ A+++ ++F + + PR S+FI+ K+L+++++ FSVG RFK+
Sbjct: 149 NCTDSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVG 208
Query: 300 FEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
E ED+ ER F G I+G+ + WPGSKW+SL I+WD RVSPW+IE +
Sbjct: 209 CENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGS 267
Query: 359 SAPLNLAQPAVKSKR------PRSIDIP 380
S + + SKR P +D P
Sbjct: 268 SVSVTHRLSSSVSKRTKLCFPPSDLDTP 295
>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 701
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 220/703 (31%), Positives = 310/703 (44%), Gaps = 103/703 (14%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E AS + + +P+ I CRV
Sbjct: 18 LNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPR-----IPAYIPCRVS 72
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--PPKQTVHSFCKILTASDTSTH 140
++ +A+ E+DEVYA+ITL P + +E D ++ SF K LT SD +
Sbjct: 73 AMKFMADPESDEVYAKITLVP-LNGSESDYDDDGYGNGTESQEKPASFAKTLTQSDANNG 131
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 132 GGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTF 191
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS------VISSQSMHLG----- 249
V K+L+AGD+ VFLR ENG+L VG+RR P S + M G
Sbjct: 192 VNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGCNYVMPYGGFSAF 251
Query: 250 --------------------------VLATAAHAVKTSTL------FIVYYKPRTS--QF 275
V TA ++ L F V Y PR S +F
Sbjct: 252 LREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVNGQPFEVIYYPRASTPEF 311
Query: 276 IIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSL 332
+ + A + GMRFKM FE EDS F GTI V V D +WP S WR L
Sbjct: 312 CVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVAD-PVRWPDSPWRLL 370
Query: 333 KIQWDEPATVQRPERVSPWEIEPFVASAP----LNLAQPAVKSKRPRSIDIPASASAFWY 388
++ WDEP +Q +RVSPW +E V++ P + + P K + P+ D P A +
Sbjct: 371 QVTWDEPDLLQNVKRVSPWLVE-LVSNMPSIHLTHFSPPRKKLRFPQYPDFPLDAQ---F 426
Query: 389 QGSTQSHDIT---------------QVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTD 433
T S ++ + GA Q S + P K
Sbjct: 427 SMPTFSSNLVGPSNPFGCLSDNIPAGMQGARHAQYGLS-LSDPHHNKFQSGLFPAPFPQL 485
Query: 434 DHRIVAAQSVLSGYASSGRPGN------TVIHEEVERGKKS-EASLGCWLFGIDLKHNSN 486
DH ++ + Y S R + I + E KKS + G LFG +
Sbjct: 486 DHPATPPKAS-NDYVSRKRSSSENVSSLLTIAQSTETSKKSDDRKTGFTLFGRSILTEQQ 544
Query: 487 TAAPLGRKVVDPT-TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKE------TQ 539
+ V P TG S +G+ ++F L + G+ + S E
Sbjct: 545 MSQSCSGDTVSPVITGNSSSEGNQDKMANFSDGSGSALHQ--HGLPEHSSCEGYQTYKVN 602
Query: 540 NKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRDKWAV 598
+++ KV M+ VGR +DL+ L YD+L +L KMF I+ ++R V
Sbjct: 603 HRETEPNLETGHCKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIEDSEMRNH----V 658
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
++ D G + GD+ + +F K K++ I N+ K
Sbjct: 659 LYRDATGAVKHIGDEPFSDFTKTAKRLTILMDSSSDNVGVYRK 701
>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
Length = 702
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 208/689 (30%), Positives = 310/689 (44%), Gaps = 120/689 (17%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YF QGH E A + PL ILCRVV ++
Sbjct: 10 QLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPPDFHAPRVPPL------ILCRVVAVK 63
Query: 86 LLAEQETDEVYAQITLHP--------ETDQTE--PRSPDQCLPEPPKQTVHSFCKILTAS 135
LA+ ETDEV+++ITL P E D SPD P ++ SF K LT S
Sbjct: 64 FLADAETDEVFSKITLLPLPGNDLDLENDAVLGLTPSPDGNGPNGNEKPA-SFAKTLTQS 122
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
D + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 123 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 182
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR----------LAHQQSSMP-------- 237
GWSTFV K+L+AGD+ VFLR E+G+L VG+RR + +++P
Sbjct: 183 GWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNGVGSDNNNIPYPGFSGFL 242
Query: 238 --SSVISSQSMHL------GVLATAAHA---------------VKTSTLFIVYYKPRTS- 273
+S+ M + G A AA F V Y PR S
Sbjct: 243 RDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARGQAFEVVYYPRAST 302
Query: 274 -QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKW 329
+F + + A+ + GMRFKM FE EDS F GT+ V V D +WP S W
Sbjct: 303 PEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPW 361
Query: 330 RSLKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
R L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+ + P + F
Sbjct: 362 RLLQVAWDEPDLLQNVKRVSPWLVE-LVSNMPTIHLSPFSPRKKLRIPQPFEFPFDGTKF 420
Query: 387 WYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKE---------IDSTIINNNSTDD--- 434
+ + + + + + ++ ++ RQ + + S + N NS
Sbjct: 421 PFFANNNGESMCYL--SNDNNNNAPAGIQGARQAQQLFGSPSPSLLSDLNNLNSYSAVNK 478
Query: 435 -HRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGR 493
H+ + LSG+ + ++ +G+ +E +N+N + L
Sbjct: 479 LHQSSSPAMFLSGFNPRHHHYDNIVLS--RQGRDTE-----------FNNNNNISCSL-- 523
Query: 494 KVVDPTTGTSGVKGSARAASDFDASQ----------NQDLKEVKRGMADVSRKETQNKQG 543
T G G+ + + Q Q + KR + + + + K G
Sbjct: 524 -----TMGNPGLVHDKKKSGSVKTHQFLLFGQPILTEQQVMNRKRSLEEEAEAAQEEKTG 578
Query: 544 S-----AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAV 598
S KV M+ VGR +DL+ + Y +L+ +L +MF I+ R V
Sbjct: 579 SWNYGLQGLETGHCKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFCIEE--RSDLLTHV 636
Query: 599 VFTDDEGDMMLAGDDQWPEFCKMVKKIFI 627
V+ D G + GD+ + +F + K++ I
Sbjct: 637 VYRDANGVIKRIGDEPFSDFMRATKRLTI 665
>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
Length = 779
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/448 (37%), Positives = 225/448 (50%), Gaps = 64/448 (14%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA +P+ + + P G L +LW ACAG +V++P G +V YFPQGH EQ A
Sbjct: 1 MASSDPSNSANKAHSDHPKKG-LDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA-- 57
Query: 61 NQELTHQEPLFDLP---SKILCRVVHIELLAEQETDEVYAQITLHPET-----------D 106
+ D P ILCRV+ ++ LA+ ETDEVYA++ L PE D
Sbjct: 58 ---------IPDFPRSGGTILCRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGD 108
Query: 107 QTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQ 166
E S + +P SF K LT SD + GGFSV R A P LD ++ P Q
Sbjct: 109 DEELVSSPTVVEKP-----ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQ 163
Query: 167 ELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGV 226
+ AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGDA VFLR +GEL VGV
Sbjct: 164 TVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGV 223
Query: 227 RRLAHQQSSMPSSV----ISSQSMHLGVLATAAHAVKTSTL------------------- 263
RR + S + QS + +L+ ++
Sbjct: 224 RRSMRGPGNGDSGISWHSSPGQSGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLA 283
Query: 264 -----FIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIV 315
F V Y PR T++F + + ++ H + GMRFKM FE EDS F GTI
Sbjct: 284 AAGQAFEVVYYPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTIS 343
Query: 316 GVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
V +WP S WR L++ WDEP +Q RVSPW++E V++ P+ L ++ K+
Sbjct: 344 AVQPADPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVE-LVSTLPMQLPPFSLPRKKI 402
Query: 375 RSIDIPASASAFWYQGSTQSHDITQVVG 402
R +D+ S + G + V+G
Sbjct: 403 RPLDLQFGESQGGFMGLPMAALANNVLG 430
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI-QGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ + VGR +DL+ Y++L+D L MF + + +L R VV+ D EG + G
Sbjct: 692 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 747
Query: 612 DDQWPEFCKMVKKIFI 627
+ + F K V+++ I
Sbjct: 748 GEPYGNFVKSVRRLTI 763
>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 595
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 205/384 (53%), Gaps = 42/384 (10%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P+ G +V YFPQGH EQ A+T P +P CRVV
Sbjct: 12 LDAQLWHACAGGMVQLPQVGAKVIYFPQGHGEQ-AATTPDFSASMGPSGTIP----CRVV 66
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
+ LA+ ETDEV+A++ L PE ++ PP + SF K LT SD + GG
Sbjct: 67 SVNFLADTETDEVFARMRLQPEGLHGLNDMTEEAPSSPPPEKPASFAKTLTQSDANNGGG 126
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R A PPLD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 127 FSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTTGWSTFVN 186
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRL--------AHQQSSMPSSVISSQSMHLGVLATA 254
K+LVAGDA VFLR +GEL VGVRR H SS S SQ G T+
Sbjct: 187 QKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSNGVSRSGSQ----GASTTS 242
Query: 255 AHAVKTSTL-----------------FIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMR 295
+ A + + F V Y PR T++F + +A+ H + GMR
Sbjct: 243 SFARNRARVTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDHTWYAGMR 302
Query: 296 FKMRFEGEDSPE-RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEI 353
FKM FE EDS F GTI V WP S WR + WDEP +Q RVSPW++
Sbjct: 303 FKMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVSPWQV 359
Query: 354 EPFVASAPLNLAQPAVKSKRPRSI 377
E VA+ P+ L + K+ R++
Sbjct: 360 E-LVATLPMQLPPFSYPKKKLRAV 382
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV +G VGR +DL K Y++++D L MF + K VV+ D EG + G
Sbjct: 522 KVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSVPAA---SFKNRVVYQDGEGCTLPVGA 578
Query: 613 DQWPEFCKMVKKIFI 627
+ + F V+++ I
Sbjct: 579 EPYGNFVAAVRRLTI 593
>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
Length = 575
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 192/331 (58%), Gaps = 18/331 (5%)
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
K T H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG +WRF+
Sbjct: 25 KLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 84
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQPRRHLLTTGWS+F+ K+LV+GDA +FLRG +GELR+GVRR ++ +
Sbjct: 85 HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRAVQLKNEALLEAV 144
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMR 299
+ L +L+ A ++ ++F + + PR S+FI+ K+L+ +++ FS+G RFK+
Sbjct: 145 NCTDSKLLMLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLKGLNYPFSIGTRFKVG 204
Query: 300 FEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
+ ED+ ER F G I G+ + +WPGSKW+SL ++WD RVSPW+IE +
Sbjct: 205 CKNEDANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKYSHQNRVSPWDIERVGS 263
Query: 359 SAPLNLAQPAVKSKRPR------SIDIPA--------SASAFWYQGSTQSHDITQVVGAT 404
S + + SKR + ++D P S + Q ++ +V GA
Sbjct: 264 SVSVTHCLSSCVSKRMKLCFPQGNLDAPILDGNGRPDSVGTEGFHQVLQGQELVRVHGAA 323
Query: 405 EGQSSESQVVRPMRQKEIDSTIINNNSTDDH 435
SS++ + + + + N D H
Sbjct: 324 CSHSSDTPRCQGSYGRRFSADVWNCKMNDGH 354
>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
Length = 835
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 230/463 (49%), Gaps = 79/463 (17%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA +P+ + + P G L +LW ACAG +V++P G +V YFPQGH EQ A
Sbjct: 42 MASSDPSNSANKAHSDQPKKG-LDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA-- 98
Query: 61 NQELTHQEPLFDLP---SKILCRVVHIELLAEQETDEVYAQITLHPET-----------D 106
+ D P ILCRV+ ++ LA+ ETDEVYA++ L PE D
Sbjct: 99 ---------IPDFPRSGGTILCRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGD 149
Query: 107 QTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQ 166
E S + +P SF K LT SD + GGFSV R A P LD ++ P Q
Sbjct: 150 DEELVSSPTVVEKP-----ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQ 204
Query: 167 ELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGV 226
+ AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGDA VFLR +GEL VGV
Sbjct: 205 TVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGV 264
Query: 227 RRLAH---------------QQSSMPSSV----ISSQSMHLGVLA-------------TA 254
RR Q S+P + I S+S + +L+
Sbjct: 265 RRSMRGPGNGDSGISWHSSPGQRSLPQNSSRWEIKSESGYSELLSGNGSGTSGASFARNR 324
Query: 255 AHAVKTSTL-----------FIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFE 301
A S L F V Y PR T++F + + ++ H + GMRFKM FE
Sbjct: 325 ARVTSKSVLEAASLAAAGQAFEVVYYPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFE 384
Query: 302 GEDSPE-RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVAS 359
EDS F GTI V +WP S WR L++ WDEP +Q RVSPW++E V++
Sbjct: 385 TEDSSRISWFMGTISAVQPADPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVE-LVST 443
Query: 360 APLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVG 402
P+ L ++ K+ R +D+ S + G + V+G
Sbjct: 444 LPMQLPPFSLPRKKIRPLDLQFGESQGGFMGLPMAALANNVLG 486
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI-QGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ + VGR +DL+ Y++L+D L MF + + +L R VV+ D EG + G
Sbjct: 748 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 803
Query: 612 DDQWPEFCKMVKKIFIYS 629
+ + F K V+++ I +
Sbjct: 804 GEPYGNFVKSVRRLTILA 821
>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 697
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 207/683 (30%), Positives = 301/683 (44%), Gaps = 96/683 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P+ +V+YFPQGH E + + +P ILC V ++
Sbjct: 11 QLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTTID---------LRVPPFILCNVEAVK 61
Query: 86 LLAEQETDEVYAQITL--------HPETDQT---EPRSPDQCLPEPPKQTVHSFCKILTA 134
+A+ ETD+V+A+++L P++D + P C E P SF K LT
Sbjct: 62 FMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSC--EKPA----SFAKTLTQ 115
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD T P Q + AKD+HG WRF+HI+RG PRRHLLT
Sbjct: 116 SDANNGGGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLT 175
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------- 228
TGWS+FV K+LVAGD+ VFLR ENG+L VG+RR
Sbjct: 176 TGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSASGSGIG 235
Query: 229 -----LAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL------FIVYYKPRTS--QF 275
L + + + ++ V A V+ TL F V Y PR S +F
Sbjct: 236 PFSFFLKEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVYYPRASTPEF 295
Query: 276 IIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSLK 333
+ + A+ + GMRFKM FE ED+ F GTI V WP S WR L+
Sbjct: 296 CVKASSVGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICWPNSPWRLLQ 355
Query: 334 IQWDEPATVQRPERVSPWEIEPFVASAPL-NLA--QPAVKSKRPRSIDIPASASAFWYQG 390
+ WDEP +Q +RVSPW +E V++ PL N P K RP+ D P
Sbjct: 356 VTWDEPDLLQNVKRVSPWLVE-LVSNIPLINFTPFSPPRKKLRPQHPDFPLDVQFPIPML 414
Query: 391 STQSHDITQ-VVGATEGQSSESQVVRPMR-QKEIDSTIINNNSTDDHRIVAAQSVLSGYA 448
S H + G ++ + Q R + K + +NNN + L G
Sbjct: 415 SGNQHGPNSPLCGFSDNAPAGIQGARHAQFGKSLSDLHLNNNKLQLGMLPTNIHQLGGVY 474
Query: 449 SSGRPGNTVIHEEVERGKKSEASLGCWLF----GIDLKHNSNTAAPLGRKVVDPTTGTSG 504
+ GN + + KS+ SL C+L L+ + + P
Sbjct: 475 TGISSGNMMTKHD-----KSKESLSCFLTMGKSSKSLEKSDDVKKHQFLLFGQPILTEQQ 529
Query: 505 VKGSARAASDFDASQNQDLKEVKRGMADVSRK--ETQNKQGSAASTR---------TRTK 553
+ +R D K+ + + D S+ Q G A+S K
Sbjct: 530 ISSCSRDVLSRGKRSLGDEKDKAKCVLDDSQSTLSQQFSPGKASSAEFFWQLGLDTGHCK 589
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDD 613
V ++ VGR +DL+ Y++L+ L MF I+ R V++ D G + G++
Sbjct: 590 VFLESEDVGRTLDLSQFGSYEELYRRLGNMFGIE---RSEILNHVLYYDAAGAVKQTGEE 646
Query: 614 QWPEFCKMVKKIFIYSTEEVKNM 636
+ +F K K++ I + KN+
Sbjct: 647 PFSDFMKTAKRLTILTDSGSKNI 669
>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
Length = 309
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/267 (51%), Positives = 184/267 (68%), Gaps = 7/267 (2%)
Query: 17 GPGSGD---LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL 73
PG G+ + ELW ACAGPLV +P G V YFPQGH EQ+ AS ++EL + L
Sbjct: 12 APGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSL 71
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
PSK++C+++ + L A+ ETDEVYAQ+TL P + D+ + + L + KQ FCK
Sbjct: 72 PSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQN-KQPAEFFCKT 130
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LTASDTSTHGGFSV R+ A + PPLD T+ P QEL AKDLH W+F+HI+RGQP+RH
Sbjct: 131 LTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRH 190
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVL 251
LLTTGWS FV++KRL+AGD+ +F+R E +L +G+RR Q ++ SSV+SS SMH+G+L
Sbjct: 191 LLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGIL 250
Query: 252 ATAAHAVKTSTLFIVYYKPR-TSQFII 277
A AAHA S+ F ++Y PR S ++I
Sbjct: 251 AAAAHAAANSSPFTIFYNPRYYSSYLI 277
>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
Length = 755
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 208/680 (30%), Positives = 310/680 (45%), Gaps = 106/680 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +V+YFPQGH E A +N + F +P ILCRV ++
Sbjct: 67 QLWHACAGGMVQMPSVNTKVFYFPQGHAEH--AQSNVDFGDS---FRIPPLILCRVASVK 121
Query: 86 LLAEQETDEVYAQITLHP------ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
LA+ ETDEV+++ITL P E D ++ + E P SF K LT SD +
Sbjct: 122 FLADSETDEVFSKITLIPLRNSELENDDSDGDGSENS--EKPA----SFAKTLTQSDANN 175
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS+
Sbjct: 176 GGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSS 235
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAH---QQSSMPSSVISSQ-SMHLGVLATAA 255
FV K+LVAGD+ VFLR E+GEL VG+RR PS S + LG A
Sbjct: 236 FVNQKKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYGGAF 295
Query: 256 HA-------------------VKTS---------------TLFIVYYKPRTS--QFIIGL 279
A VK S T +VYY PR S +F I
Sbjct: 296 TAFLREENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYY-PRASTPEFCIKT 354
Query: 280 NKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSLKIQWD 337
+ A+ + GMRFKM FE EDS F GTI V +WP S WR L++ WD
Sbjct: 355 SAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTWD 414
Query: 338 EPATVQRPERVSPWEIEPFVASAPLNLA---QPAVKSKRPRSIDIPASASAFWY-QGSTQ 393
EP + +RVSPW +E + ++LA P K + P+ D P F S
Sbjct: 415 EPDLLHNVKRVSPWLVELVSNMSMIHLAPFSPPRKKLRFPQHPDFPLDVVQFQIPTFSGN 474
Query: 394 SHDITQVVGATEGQSSESQVVRPMRQKEIDSTI----INNNSTDDHRIVAAQSVLSGYAS 449
+ + +++ ++ + ++ R +I ++ +NNN L + +
Sbjct: 475 PFNPLCCLSSSDNYNAPAAGIQGARHAQIGISLSDLHLNNNKFQ----------LGVFPN 524
Query: 450 SGRPGNTVIHEEVERGKKSEASLGCWLF-------GIDLKHNSNTAAPLGRKVVDPTTGT 502
+ + V + KS+ S+ C L +++K ++N P
Sbjct: 525 NRETISNVSNITTNHDNKSKESISCLLTIGNSHKRSLEIKSDNNDNRHQFLLFGQPILTE 584
Query: 503 SGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT------------ 550
+ +R S D ++ + K +D ++ + A S+ T
Sbjct: 585 QQI---SRKDSSDDVLLSKKKDKEKWFFSDTTQSSISEQFSPAKSSTTSASADFCWQLGL 641
Query: 551 ---RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
KV ++ VGR +DL+ + Y++L+ +L KMF I+ R V++ D G +
Sbjct: 642 DTGHCKVFLESEDVGRTLDLSCVGSYEELYRKLAKMFGIE---RSEMLSRVLYRDATGAV 698
Query: 608 MLAGDDQWPEFCKMVKKIFI 627
G++ + +F K K++ I
Sbjct: 699 KQTGEEPFSDFMKTAKRLTI 718
>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
Length = 708
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 156/406 (38%), Positives = 211/406 (51%), Gaps = 61/406 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW+ACAG +V++P +V+YFPQGH E ++ + +PS +LCRV ++
Sbjct: 12 QLWQACAGSMVQIPPLNTKVFYFPQGHAEHSQSPVDFPQR-------IPSLVLCRVASVK 64
Query: 86 LLAEQETDEVYAQITL--HPETDQTEPRSPDQCLPEPPKQTVH---SFCKILTASDTSTH 140
LA+ TDEV+A+I+L P+ D + D C SF K LT SD +
Sbjct: 65 FLADPGTDEVFAKISLVPLPDADLDISQDVDICGDGNDSNNAEKPASFAKTLTQSDANNG 124
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R A P LD + P Q L AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRR------LAHQQSSMPSSV-------------- 240
V K+LVAGD+ VFLR ENG+L VG+RR + S PS +
Sbjct: 185 VNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGVGIGSGPESSPSHIGWNSNNATSANPYG 244
Query: 241 -----ISSQSMHLG------------VLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNK 281
+ M G VL A A + +VYY PR S +F + +
Sbjct: 245 GFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVVYY-PRASTPEFCVKASS 303
Query: 282 YLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDE 338
A+ C+ GMRFKM FE EDS F GT+ V V D ++WP S WR L++ WDE
Sbjct: 304 VRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVAD-PDRWPNSPWRLLQVTWDE 362
Query: 339 PATVQRPERVSPWEIEPFVASAPL----NLAQPAVKSKRPRSIDIP 380
P +Q + VSPW +E V++ P+ + P K + P+ +D P
Sbjct: 363 PDLLQTVKCVSPWLVE-LVSNMPVIHLSPFSPPRKKLRFPQQLDFP 407
>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
Length = 834
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 229/423 (54%), Gaps = 52/423 (12%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P RV YFPQGH EQ+ ASTN+E+ P + +LP +++C++
Sbjct: 21 LNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQL 80
Query: 82 VHIELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+ + A+ ETDEVYAQ+TL P +Q +P P + + KQ + FCK LTASDTST
Sbjct: 81 HDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAE-MGIMSKQPTNYFCKTLTASDTST 139
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG-WS 198
HGGFSV R+ A PPL L L + G R + + R+ L G W+
Sbjct: 140 HGGFSVPRRAAERVFPPL---LHAGLFGLLLQITGGIVCRQRIPLSSRQRQELRNPGSWN 196
Query: 199 ---------------TFVTSKRLVAGDA------------FVFLRGENGELRVGVRRLAH 231
T T + + G A L E +L +G+RR +
Sbjct: 197 GRALARKSRTEKPCRTIETGRCWIVGTAQRRTGWPCGVPGGPGLGNEKNQLLLGIRRASR 256
Query: 232 QQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHC 289
Q+ MPSSV+SS SMH+G+LA AAHA T++ F +++ PR S+F+I L+KY++AV H
Sbjct: 257 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKAVFHT 316
Query: 290 -FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPER 347
SVGMRF+M FE E+S RR+ GTI V D +WP S WRS+K+ WDE +RP R
Sbjct: 317 RISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPR 376
Query: 348 VSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVGATEGQ 407
VS WEIEP + + P+ + ++ K P WY G HD + + G
Sbjct: 377 VSLWEIEP-LTTFPMYPSLFPLRVKHP------------WYSGVAALHDDSNALMWLRGV 423
Query: 408 SSE 410
+ E
Sbjct: 424 AGE 426
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 709 LQSPMYGCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 767
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 768 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 824
>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
Length = 714
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 207/418 (49%), Gaps = 68/418 (16%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS-KILC 79
G L +LW ACAG +V++P G +V YFPQGH EQ + T + P +P+ + C
Sbjct: 34 GGLDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAAS------TPEFPRTLVPNGSVPC 87
Query: 80 RVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
RVV + LA+ ETDEV+A+I L PE + D L PP + SF K LT SD +
Sbjct: 88 RVVSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSDANN 147
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFS+ R A PPLD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 148 GGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWST 207
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSS----------MPSSVI-------- 241
FV K+LVAGDA VFLR +GEL VGVRR S+ +S I
Sbjct: 208 FVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSRWEVK 267
Query: 242 --SSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFI-----IGLNKYLEA--------- 285
S S LG + +A+ +S P TS F + LEA
Sbjct: 268 GTESFSDFLGGVGDNGYALNSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSGER 327
Query: 286 -----------VHHCFSVG-------------MRFKMRFEGEDSPE-RRFTGTIVGVGDF 320
C G MRFKM FE EDS F GTI V
Sbjct: 328 FEVVYYPRASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAA 387
Query: 321 SE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSI 377
WP S WR L++ WDEP +Q RVSPW++E VA+ P+ L ++ K+ R++
Sbjct: 388 DPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLE-LVATLPMQLPPVSLPKKKLRTV 444
>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
Length = 709
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 212/708 (29%), Positives = 302/708 (42%), Gaps = 124/708 (17%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK-----ILCR 80
+LW ACAG +V++P +VYYFPQGH E Q P+ DLP+ +LCR
Sbjct: 23 QLWHACAGGMVQMPPVHSKVYYFPQGHAEHA----------QGPVVDLPAGRVPALVLCR 72
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------------SF 128
V + +A+ +TDEV+A+I L P P P SF
Sbjct: 73 VAAVRFMADPDTDEVFAKIRLAP----VRPNEPGYAADADDAIGAAAAGGGAQEDKPASF 128
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
K LT SD + GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG P
Sbjct: 129 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTP 188
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-----------LAHQQ---- 233
RRHLLTTGWSTFV K+LVAGD+ VF+R ENG+L VG+RR L H Q
Sbjct: 189 RRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLHHHQPPPP 248
Query: 234 --------------------SSMPSSVISSQSMHLGVLATAAHAVKTSTL------FIVY 267
S M ++ +++ + V V+ + L F V
Sbjct: 249 PGGGGYAGFSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANLAVSGQPFEVV 308
Query: 268 YKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSE 322
Y PR T +F + A+ + GMRFKM FE EDS F GT+ V V D
Sbjct: 309 YYPRASTPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PI 367
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP----LNLAQPAVKSKR--PRS 376
+WP S WR L++ WDEP +Q +RVSPW +E V++ P L P + K P
Sbjct: 368 RWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHHLTPFSPPPRKKLCVPLY 426
Query: 377 IDIPASASAF---WYQGSTQSHDITQVVGATEGQSSESQVVRPMR-------------QK 420
++P F + GS + + +G + Q R + Q
Sbjct: 427 PELPLEGHQFPAPMFHGSPLGRGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLDKLQS 486
Query: 421 EIDSTIINNNSTDDHRIVA--AQSVLSGYASSGR------------PGNTVIHEEVERGK 466
+ ++++ D H + A ++ G+ ++ R P N +V++
Sbjct: 487 SLSPHGLHHHQLDGHGVQPRIAAGLIIGHPAAARDDISCLLTIGTTPQNRKPSSDVKKAA 546
Query: 467 KSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSA-RAASDFDASQNQDLKE 525
+ L LFG + + LG P S A R S+ D S
Sbjct: 547 AAAPQL--MLFGKPILTEQQIS--LGNVAGFPAPKKSPSDDVAERTVSNSDVSSPGSNHG 602
Query: 526 VKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE 585
+ + NK KV MQ VGR +DL+A+ Y++L+ L MF
Sbjct: 603 GSSRSSGGAPSCQDNKVPDLGLETGHCKVFMQSEDVGRTLDLSAVGSYEELYQRLADMFG 662
Query: 586 IQGQLRPRDKWAVVFTDD-EGDMMLAGDDQWPEFCKMVKKIFIYSTEE 632
I + V + DD G + GD + EF K +++ I + E
Sbjct: 663 ID---KTELMSHVFYRDDASGALKHTGDKPFSEFTKTARRLTILTDAE 707
>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
Length = 698
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 202/653 (30%), Positives = 288/653 (44%), Gaps = 89/653 (13%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE--PLFDLPSKILCRVVH 83
+LW ACAG +V++P RVYYF QGH E + E P LP +LCRV
Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPR-ALPPLVLCRVEG 74
Query: 84 IELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLP--------EPPKQTVHSFCKILTA 134
++ LA++++DEVYA+I L P + E R PD+ P EP + SF K LT
Sbjct: 75 VQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQ 134
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 135 SDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 194
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------- 228
TGWSTFV K+LVAGD+ VFLR +GEL VG+RR
Sbjct: 195 TGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFS 254
Query: 229 --LAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL------FIVYYKPR--TSQFIIG 278
L ++S + M A V+ ++L F V Y PR T F++
Sbjct: 255 AFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVVK 314
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQ 335
A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++
Sbjct: 315 AASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVAD-PNRWPNSPWRLLQVT 373
Query: 336 WDEPATVQRPERVSPWEIEPFVASAPLNL---AQPAVKSKRPRSIDIPASASAF--WYQG 390
WDEP +Q + VSPW +E + P++L + P K + P D P + G
Sbjct: 374 WDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHPDFPFEGHLLNPIFHG 433
Query: 391 STQSHDITQVVGATEGQSSESQVVR------PMRQKEIDST---IINNNSTDDHRIVAAQ 441
+ + + + + Q R P+ +++ ++++ S + +
Sbjct: 434 NPLGPSNSPLCCYPDTAPAGIQGARHAQFGLPLTDHQLNKLHLGLLHSGSFNRLDAITPP 493
Query: 442 SVLS-GYASSGRPGNTVIH--------EEVERGKKSEASLGCWLFGIDLKHNSNTAAPLG 492
S +S G+ S P + I + E+ + + LFG + +
Sbjct: 494 SRISKGFVVSSAPAHDNISCLLSISTPQVAEKSDDRKTTPHIMLFGKAIFTEQQITSSGS 553
Query: 493 RKVVDP-TTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTR 551
+ + P TG S G+A + + + S+ + G A
Sbjct: 554 TETLSPGVTGNSSPNGNAHKTGNASDGSGSSI-----CIGFSSQGHEASDLGLEAG---H 605
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-----EIQGQLRPRDKWAVV 599
KV M+ VGR +DL+ Y++L+ L MF EI L RD VV
Sbjct: 606 CKVFMESEDVGRTIDLSVFGSYEELYGRLADMFGIEKEEIINHLHFRDAAGVV 658
>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
Japonica Group]
gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
Length = 760
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 202/653 (30%), Positives = 288/653 (44%), Gaps = 89/653 (13%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE--PLFDLPSKILCRVVH 83
+LW ACAG +V++P RVYYF QGH E + E P LP +LCRV
Sbjct: 78 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPR-ALPPLVLCRVEG 136
Query: 84 IELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLP--------EPPKQTVHSFCKILTA 134
++ LA++++DEVYA+I L P + E R PD+ P EP + SF K LT
Sbjct: 137 VQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQ 196
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 197 SDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 256
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------- 228
TGWSTFV K+LVAGD+ VFLR +GEL VG+RR
Sbjct: 257 TGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFS 316
Query: 229 --LAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL------FIVYYKPRTS--QFIIG 278
L ++S + M A V+ ++L F V Y PR S F++
Sbjct: 317 AFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVVK 376
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQ 335
A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++
Sbjct: 377 AASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVAD-PNRWPNSPWRLLQVT 435
Query: 336 WDEPATVQRPERVSPWEIEPFVASAPLNL---AQPAVKSKRPRSIDIPASASAF--WYQG 390
WDEP +Q + VSPW +E + P++L + P K + P D P + G
Sbjct: 436 WDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHPDFPFEGHLLNPIFHG 495
Query: 391 STQSHDITQVVGATEGQSSESQVVR------PMRQKEIDST---IINNNSTDDHRIVAAQ 441
+ + + + + Q R P+ +++ ++++ S + +
Sbjct: 496 NPLGPSNSPLCCYPDTAPAGIQGARHAQFGLPLTDHQLNKLHLGLLHSGSFNRLDAITPP 555
Query: 442 SVLS-GYASSGRPGNTVIH--------EEVERGKKSEASLGCWLFGIDLKHNSNTAAPLG 492
S +S G+ S P + I + E+ + + LFG + +
Sbjct: 556 SRISKGFVVSSAPAHDNISCLLSISTPQVAEKSDDRKTTPHIMLFGKAIFTEQQITSSGS 615
Query: 493 RKVVDP-TTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTR 551
+ + P TG S G+A + + + S+ + G A
Sbjct: 616 TETLSPGVTGNSSPNGNAHKTGNASDGSGSSI-----CIGFSSQGHEASDLGLEAG---H 667
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-----EIQGQLRPRDKWAVV 599
KV M+ VGR +DL+ Y++L+ L MF EI L RD VV
Sbjct: 668 CKVFMESEDVGRTIDLSVFGSYEELYGRLADMFGIEKEEIINHLHFRDAAGVV 720
>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
Length = 670
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 208/685 (30%), Positives = 309/685 (45%), Gaps = 98/685 (14%)
Query: 15 QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
+GG G L +LW ACAG +V +P +V+YFPQGH E + P+
Sbjct: 9 KGGTEKG-LDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDFGNLPIHPM---- 63
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LCRV+ I+ +A+ E+DEVYA++ L P D D E + SF
Sbjct: 64 --VLCRVLAIKYMADAESDEVYAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFA 121
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LT SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PR
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPR 181
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH------QQSSMPSSVISS 243
RHLLTTGWS FV K+LVAGD+ VF+R ENG+L VG+RR + S + I
Sbjct: 182 RHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGG 241
Query: 244 QSMHLGVL---------------------ATAAHAVKTSTL------FIVYYKPR--TSQ 274
+ +L TA ++ +TL F V Y PR TS+
Sbjct: 242 SCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSE 301
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 302 FCVKAVDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSD-PIRWPNSPWRL 360
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ---PAVKSKRPR---------SIDI 379
L++ WDEP +Q +RV+PW +E P+ L P K + P+ SI +
Sbjct: 361 LQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPV 420
Query: 380 PASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVA 439
P+ S + S S + V +G + + ++ +N
Sbjct: 421 PSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPPPPPSSL 480
Query: 440 AQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWL-FGIDLKHNSNTAAP---LGRKV 495
+S G + I + E+G C+L G +++ + L K+
Sbjct: 481 PRSPSLGLRN--------IDTKNEKGF-------CFLTMGTTPCNDTESKKSHIVLFGKL 525
Query: 496 VDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT----- 550
+ P S KGS A + + +Q + G+A R+ + + +GS S +
Sbjct: 526 ILPEEQLSE-KGSTDTA-NIEKTQISSGGSNQNGVA--GRELSSSDEGSPCSNKVHDASG 581
Query: 551 ----RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGD 606
KV M+ VGR +DL+ L Y++L +L MF I+ + +V++ D G
Sbjct: 582 LETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSVLYRDASGA 638
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTE 631
+ AG++ + EF K +++ I + +
Sbjct: 639 IKYAGNEPFSEFLKTARRLTILTEQ 663
>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 202/374 (54%), Gaps = 23/374 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E AS + + +P+ I CRV
Sbjct: 18 LNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPR-----IPAYIPCRVS 72
Query: 83 HIELLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
++ +A+ E+DEVYA+ITL P E+D + + ++ SF K LT SD +
Sbjct: 73 AMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNG---TESQEKPASFAKTLTQSDAN 129
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 130 NGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 189
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
TFV K+L+AGD+ VFLR ENG+L VG+RR S + + A
Sbjct: 190 TFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSFFGRVKVTAEAVIEAVRLA 249
Query: 259 KTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI- 314
F V Y PR T +F + + A + GMRFKM FE EDS F GTI
Sbjct: 250 VNGQPFEVIYYPRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTIS 309
Query: 315 -VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP----LNLAQPAV 369
V V D +WP S WR L++ WDEP +Q +RVSPW +E V++ P + + P
Sbjct: 310 SVQVAD-PVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPSIHLTHFSPPRK 367
Query: 370 KSKRPRSIDIPASA 383
K + P+ D P A
Sbjct: 368 KLRFPQYPDFPLDA 381
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRDKWAVVFTDDEGDMMLAG 611
KV M+ VGR +DL+ L YD+L +L KMF I+ ++R V++ D G + G
Sbjct: 495 KVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIEDSEMRNH----VLYRDATGAVKHIG 550
Query: 612 DDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
D+ + +F K K++ I N+ K
Sbjct: 551 DEPFSDFTKTAKRLTILMDSSSDNVGVYRK 580
>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
vinifera]
Length = 247
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 151/237 (63%), Gaps = 35/237 (14%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
MA ++ G S+ G + LY+ELW AC PLV +P ERVYYFPQGH+E LEAS
Sbjct: 14 MAMIQEQVGVLNGSKLGTVNIALYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASM 73
Query: 61 NQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP 120
+QEL + P F+LPSKILC+ V+ +H C+
Sbjct: 74 HQELDQKMPSFNLPSKILCKXVNF----------------IH------------NCI--- 102
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
VH FCK LTASDTSTHGGFSVLR+H ECLPPLDM+ P QEL AKD+HG E F
Sbjct: 103 ----VHPFCKTLTASDTSTHGGFSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPF 158
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMP 237
+HIF+GQPR HLLTTGWS FV++KRL GDA +FLR ENGEL VGVRRL Q +++P
Sbjct: 159 RHIFQGQPRCHLLTTGWSVFVSTKRLAVGDALIFLRKENGELCVGVRRLTRQLNNVP 215
>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 709
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 209/406 (51%), Gaps = 46/406 (11%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E EL LP+ +LC V +
Sbjct: 34 QLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRPLPALVLCCVAGVR 93
Query: 86 LLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPP--KQTVHSFCKILTASDTST 139
LA+ +TDEV+A+I L P E EP +PP ++ + SF K LT SD +
Sbjct: 94 FLADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSDPPEAREKLSSFAKTLTQSDANN 153
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 154 GGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWST 213
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR--------------------------LAHQQ 233
FV K+LVAGD+ VFLR E+GEL VG+RR L ++
Sbjct: 214 FVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAPGYGGFSAFLKDEE 273
Query: 234 SSM----PSSVISSQS-MHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAV 286
+ M P+ + + + + + AA S F V Y PR T +F++ A+
Sbjct: 274 NKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTPEFVVKAAAMQAAM 333
Query: 287 HHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQ 343
+ GMRFKM FE EDS F GTI V V D +WP S WR L++ WDEP +Q
Sbjct: 334 RIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVAD-PLRWPNSPWRLLQVTWDEPDLLQ 392
Query: 344 RPERVSPWEIEPFVASAPLNL---AQPAVKSKRPRSIDIPASASAF 386
+ VSPW +E + P++L + P K + P+ D P F
Sbjct: 393 NVKCVSPWLVELVSSIPPIHLGPFSPPRKKLRVPQHPDFPLDGHLF 438
>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
Length = 1045
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/257 (50%), Positives = 173/257 (67%), Gaps = 7/257 (2%)
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
+Q FCK LTASDTSTHGGFSV R+ A + P LD ++ P QEL AKD+H W F+
Sbjct: 2 RQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFR 61
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQP+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+RR QQ ++ SSVI
Sbjct: 62 HIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVI 121
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMR 299
SS SMH+GVLA AAHA ++ F ++Y PR ++F++ L KY +A++ S+GMRF+M
Sbjct: 122 SSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMI 181
Query: 300 FEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA 358
FE E+ RR+ GT+ G+ D +W S+WR+L+I WDE A RP RVS W+IEP +
Sbjct: 182 FETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL- 240
Query: 359 SAPLNLAQPAVKSKRPR 375
P + P RPR
Sbjct: 241 -TPFYICPPPF--FRPR 254
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D
Sbjct: 918 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 976
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 977 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1007
>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
Length = 690
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 212/410 (51%), Gaps = 69/410 (16%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW+ACAG +V +P V+YFPQGH E ++ N +PS ILCRV ++
Sbjct: 12 QLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPVNFPQR-------IPSLILCRVATVK 64
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCL----------PEPPKQTVHSFCKILTAS 135
LA+ +TDEVYA+I P + + D+ L P+ P SF K LT S
Sbjct: 65 FLADPDTDEVYAKIGFVPLPNTDLDFAHDRGLCGNGNDGDSCPDKPA----SFAKTLTQS 120
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
D + GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 121 DANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGTPRRHLLTT 180
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL-------AHQQSSMP----------- 237
GWSTFV K+LVAGD+ VFLR ENG+LRVG+RR + +SS+
Sbjct: 181 GWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGWNSNNATCA 240
Query: 238 ------SSVISSQSMHLG------------VLATAAHAVKTSTLFIVYYKPRTS--QFII 277
S + M G VL A A +VYY PR+S +F +
Sbjct: 241 IPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQVVYY-PRSSTPEFCV 299
Query: 278 GLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKI 334
+ A+ + GMRFKM FE EDS F GT+ V V D +WP S WR L++
Sbjct: 300 KASSVRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVAD-PVRWPNSPWRLLQV 358
Query: 335 QWDEPATVQRPERVSPWEIEPFVASAPL----NLAQPAVKSKRPRSIDIP 380
WDEP +Q +RVSPW +E V++ P+ + P KS+ P+ + P
Sbjct: 359 AWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPPRKKSRFPQQLGFP 407
>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 711
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 208/414 (50%), Gaps = 67/414 (16%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E A TN + +P+ +LCRV
Sbjct: 8 LDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAAAP---RIPALVLCRVA 62
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL-------PEPPKQTVHSFCKILTAS 135
++ +A+ ETDEVYA+I L P + D + PE P SF K LT S
Sbjct: 63 AVKFMADPETDEVYAKIRLVPIANNELDCEDDGVMGSSGSEAPEKPA----SFAKTLTQS 118
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
D + GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 119 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTT 178
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS------------- 242
GWSTFV K+LVAGD+ VFLR ENG+L VG+RR + P S
Sbjct: 179 GWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFPKF 238
Query: 243 -----SQSMHLGV----------------------LATAAHAVKTSTLFIVYYKPRTS-- 273
S+ M GV + AA F V Y PR S
Sbjct: 239 LREDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTP 298
Query: 274 QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWR 330
+F + + AV + GMRFKM FE EDS F GTI V V D +WP S WR
Sbjct: 299 EFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVAD-PIRWPNSPWR 357
Query: 331 SLKIQWDEPATVQRPERVSPWEIEPFVASAPL----NLAQPAVKSKRPRSIDIP 380
L++ WDEP +Q +RVSPW +E V++ P+ + P K + P+ D P
Sbjct: 358 LLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPIIHLSPFSPPRKKLRIPQHPDFP 410
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR++DL+ L Y++L+ L MF I+ R V++ D G + GD
Sbjct: 603 KVFMESEDVGRSLDLSVLGSYEELYTRLANMFGIE---RSETFSHVLYRDATGAVKHTGD 659
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + +F K K++ I N+
Sbjct: 660 EPFSDFTKKAKRLTILMDSGSNNIG 684
>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
gi|223942161|gb|ACN25164.1| unknown [Zea mays]
gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
Length = 681
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 203/396 (51%), Gaps = 45/396 (11%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E +L LPS +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR---ALPSLVLCSVTGVR 69
Query: 86 LLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPP--KQTVHSFCKILTASDTSTHGG 142
LA+ ETDEV+A+I L P + E R PD+ +P ++ + SF K LT SD + GG
Sbjct: 70 FLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADAREKLSSFAKTLTQSDANNGGG 129
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 130 FSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 189
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA---------- 252
K+LVAGD+ VFLR E+GEL VG+RR+ + + G L+
Sbjct: 190 QKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFLKDEEGKM 249
Query: 253 --------------------TAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCF 290
AA + F V Y PR T +F++ A+ + +
Sbjct: 250 MKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQW 309
Query: 291 SVGMRFKMRFEGEDSPERR-FTGTIVG--VGDFSEQWPGSKWRSLKIQWDEPATVQRPER 347
GMRFKM FE EDS F GTI V D +WP S WR L++ WDEP +Q +
Sbjct: 310 CPGMRFKMAFETEDSSRISWFMGTIASAQVAD-PIRWPNSPWRLLQVAWDEPDLLQNVKC 368
Query: 348 VSPWEIEPFVASAPLNL---AQPAVKSKRPRSIDIP 380
V+PW +E + P++L + P K + P D P
Sbjct: 369 VNPWLVEIVSSIPPIHLGPFSPPRKKLRVPHHPDFP 404
>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
Length = 588
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 165/242 (68%), Gaps = 4/242 (1%)
Query: 116 CLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHG 175
C E + H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL A DLHG
Sbjct: 22 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 81
Query: 176 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSS 235
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GDA +FLRG++G+LR+GVRR ++
Sbjct: 82 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 141
Query: 236 MPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVG 293
++S L +L++ A +++ ++F + + PR+ S+FI+ + L++++H FS+G
Sbjct: 142 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIG 201
Query: 294 MRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWE 352
MRF++ +E ED+ ER G I G+ + +WPGS+W+ L ++WD+ RVSPWE
Sbjct: 202 MRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 260
Query: 353 IE 354
IE
Sbjct: 261 IE 262
>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
Length = 587
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 165/242 (68%), Gaps = 4/242 (1%)
Query: 116 CLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHG 175
C E + H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL A DLHG
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 80
Query: 176 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSS 235
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GDA +FLRG++G+LR+GVRR ++
Sbjct: 81 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 140
Query: 236 MPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVG 293
++S L +L++ A +++ ++F + + PR+ S+FI+ + L++++H FS+G
Sbjct: 141 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIG 200
Query: 294 MRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWE 352
MRF++ +E ED+ ER G I G+ + +WPGS+W+ L ++WD+ RVSPWE
Sbjct: 201 MRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 259
Query: 353 IE 354
IE
Sbjct: 260 IE 261
>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 700
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 213/697 (30%), Positives = 303/697 (43%), Gaps = 105/697 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E + E P +P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 86 LLAEQETDEVYAQITLHPETDQTE-------PRSPDQCLPEPPKQTVHSFCKILTASDTS 138
+A+ +TDEV+A+I L P + ++ SF K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 139 NGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWS 198
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ-------------- 244
TFV K+LVAGD+ VF+R ENG+L VG+RR P +
Sbjct: 199 TFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGG 258
Query: 245 -SMHL------GVLATAAHA-----------VKTSTL------FIVYYKPRTS--QFIIG 278
SM L +A AA V+ + L F V Y PR S +F +
Sbjct: 259 FSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPEFCVK 318
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQ 335
A+ + GMRFKM FE EDS F GT+ V V D +WP S WR L++
Sbjct: 319 AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRLLQVS 377
Query: 336 WDEPATVQRPERVSPWEIE-----PFVASAPLNLAQPAVKSKRPRSIDIPASAS--AFWY 388
WDEP +Q +RVSPW +E P + AP + P K P ++P +
Sbjct: 378 WDEPDLLQNVKRVSPWLVELVSNMPAIHLAP--FSPPRKKLCVPLYPELPIDGQFPTPMF 435
Query: 389 QGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTD-----------DH-- 435
G+ + + + +G + Q R Q I + ++ N DH
Sbjct: 436 HGNPLARGVGPMCYFPDGTPAGIQGAR-HAQFGISLSDLHLNKLQSSLSPHGLHQLDHGM 494
Query: 436 --RIV--------AAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNS 485
RI AA+ +S + G P N + GKK+ A L LFG +
Sbjct: 495 QPRIAAGLIIGHPAARDDISCLLTIGSPQNN----KKSDGKKAPAQL--MLFGKPILTEQ 548
Query: 486 NTAAPLGRKVVDPTTGTSGVKGSARAASDFDAS-----QNQDLKEVKRGMADVSRKETQN 540
+ V + + G + S+ D S QN + G + + N
Sbjct: 549 QISLGDAASVDVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTTDNLSCGGVPLCQ---DN 605
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVF 600
K KV MQ VGR +DL+ + Y++L+ L MF I+ + V +
Sbjct: 606 KVLDVGLETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIE---KAELMSHVFY 662
Query: 601 TDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D G + GD+ + EF K +++ I + N+A
Sbjct: 663 RDAAGALKHTGDEPFSEFTKTARRLNILTDTSGDNLA 699
>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
Length = 700
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 213/697 (30%), Positives = 303/697 (43%), Gaps = 105/697 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E + E P +P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 86 LLAEQETDEVYAQITLHPETDQTE-------PRSPDQCLPEPPKQTVHSFCKILTASDTS 138
+A+ +TDEV+A+I L P + ++ SF K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 139 NGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWS 198
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ-------------- 244
TFV K+LVAGD+ VF+R ENG+L VG+RR P +
Sbjct: 199 TFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGG 258
Query: 245 -SMHL------GVLATAAHA-----------VKTSTL------FIVYYKPRTS--QFIIG 278
SM L +A AA V+ + L F V Y PR S +F +
Sbjct: 259 FSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPEFCVK 318
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQ 335
A+ + GMRFKM FE EDS F GT+ V V D +WP S WR L++
Sbjct: 319 AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRLLQVS 377
Query: 336 WDEPATVQRPERVSPWEIE-----PFVASAPLNLAQPAVKSKRPRSIDIPASAS--AFWY 388
WDEP +Q +RVSPW +E P + AP + P K P ++P +
Sbjct: 378 WDEPDLLQNVKRVSPWLVELVSNMPAIHLAP--FSPPRKKLCVPLYPELPIDGQFPTPMF 435
Query: 389 QGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTD-----------DH-- 435
G+ + + + +G + Q R Q I + ++ N DH
Sbjct: 436 HGNPLARGVGPMCYFPDGTPAGIQGAR-HAQFGISLSDLHLNKLQSSLSPHGFHQLDHGM 494
Query: 436 --RIV--------AAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNS 485
RI AA+ +S + G P N + GKK+ A L LFG +
Sbjct: 495 QPRIAAGLIIGHPAARDDISCLLTIGSPQNN----KKSDGKKAPAQL--MLFGKPILTEQ 548
Query: 486 NTAAPLGRKVVDPTTGTSGVKGSARAASDFDAS-----QNQDLKEVKRGMADVSRKETQN 540
+ V + + G + S+ D S QN + G + + N
Sbjct: 549 QISLGDAASVDVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTTDNLSCGGVPLCQ---DN 605
Query: 541 KQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVF 600
K KV MQ VGR +DL+ + Y++L+ L MF I+ + V +
Sbjct: 606 KVLDVGLETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIE---KAELMSHVFY 662
Query: 601 TDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D G + GD+ + EF K +++ I + N+A
Sbjct: 663 RDAAGALKHTGDEPFSEFTKTARRLNILTDTSGDNLA 699
>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
Length = 705
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 206/405 (50%), Gaps = 45/405 (11%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD---LPSKILCRVV 82
+LW ACAG +V++P RVYYFPQGH E + LP+ +LC V
Sbjct: 32 QLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAATVGPRLLPALVLCSVA 91
Query: 83 HIELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLP--EPPKQTVHSFCKILTASDTST 139
+ LA+ ETDEV+A+I L P D+ R P+ P ++ + SF K LT SD +
Sbjct: 92 GVRFLADPETDEVFAKIRLVPVGPDEVAFREPEGLGPLEAEAQEKLASFAKTLTQSDANN 151
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 152 GGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWST 211
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR--------------------------LAHQQ 233
FV K+LVAGD+ VFLR E+GEL VG+RR L ++
Sbjct: 212 FVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGWNAPGYGGFSAFLKDEE 271
Query: 234 SSMPSS----VISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVH 287
+ M +S + + + + AA F V Y PR S +F++ A+
Sbjct: 272 NKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYYPRASTPEFVVKAASMQAAMR 331
Query: 288 HCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQR 344
+ GMRFKM FE EDS F GTI V V D +WP S WR L++ WDEP +Q
Sbjct: 332 IHWCPGMRFKMAFETEDSSRISWFMGTISSVQVAD-PIRWPNSPWRLLQVSWDEPDLLQN 390
Query: 345 PERVSPWEIEPFVASAPLNL---AQPAVKSKRPRSIDIPASASAF 386
+ VSPW +E + P++L + P K + P+ D P F
Sbjct: 391 VKCVSPWLVELVSSIPPIHLGPFSPPRKKLRVPQHPDFPFDGHLF 435
>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 670
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 211/686 (30%), Positives = 311/686 (45%), Gaps = 100/686 (14%)
Query: 15 QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
+GG G L +LW ACAG +V +P +V+YFPQGH E A + + +P
Sbjct: 9 KGGTEKG-LDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN--AYDCVDFGN----LPIP 61
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LCRV+ I+ +A+ E+DEV+A++ L P D D E + SF
Sbjct: 62 PMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFA 121
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LT SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PR
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPR 181
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH------QQSSMPSSVISS 243
RHLLTTGWS FV K+LVAGD+ VF+R ENG+L VG+RR + S + I
Sbjct: 182 RHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGG 241
Query: 244 QSMHLGVL---------------------ATAAHAVKTSTL------FIVYYKPR--TSQ 274
+ +L TA ++ +TL F V Y PR TS+
Sbjct: 242 SCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSE 301
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 302 FCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSD-PIRWPNSPWRL 360
Query: 332 LKIQWDEPATVQRPERVSPW--EIEPFVASAPL-NLAQPAVKSKRPR---------SIDI 379
L++ WDEP +Q +RV+PW E+ V PL + + P K + P+ SI +
Sbjct: 361 LQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPV 420
Query: 380 PASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVA 439
P+ S + S S + V +G + + ++ +N
Sbjct: 421 PSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPPPPPSSL 480
Query: 440 AQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWL-FGI----DLKHNSNTAAPLGRK 494
S G + I + E+G C+L G D K + G K
Sbjct: 481 QLSPSLGLRN--------IDTKNEKGF-------CFLTMGTTPCNDTKSKKSHIVLFG-K 524
Query: 495 VVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTR--- 551
++ P S KGS A + + +Q + G+A R+ + + +GS S +
Sbjct: 525 LILPEEQLSE-KGSTDTA-NIEKTQISSGGSNQNGVA--GREFSSSDEGSPCSKKVHDAS 580
Query: 552 ------TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEG 605
KV M+ VGR +DL+ L Y++L +L MF I+ + +V++ D G
Sbjct: 581 GLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSVLYRDASG 637
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTE 631
+ AG++ + EF K +++ I + +
Sbjct: 638 AIKYAGNEPFSEFLKTARRLTILTEQ 663
>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
Length = 709
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 156/410 (38%), Positives = 211/410 (51%), Gaps = 65/410 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +V+YFPQGH E ++ + +PS +LCRV ++
Sbjct: 11 QLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPVDFSSR-------IPSLVLCRVAGVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHS------FCKILTASDTST 139
LA+ ETDEVYA+I+L P + L + +S F K LT SD +
Sbjct: 64 YLADSETDEVYAKISLFPLPSNELDFGDEIGLCDTSTNGTNSTEKPTSFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAH-------QQSSMPSSVISSQSM---HLG 249
FV K+LVAGD+ VFLR E+G+L VG+RR +SS PS ++ S + G
Sbjct: 184 FVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNASCVNPYTG 243
Query: 250 ------------------------------VLATAAHAVKTSTLFIVYYKPRTS--QFII 277
VL +AA A +VYY PR S +F +
Sbjct: 244 GFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFEVVYY-PRASTPEFCV 302
Query: 278 GLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKI 334
+ + + GMRFKM FE EDS F GTI V V D +WP S WR L++
Sbjct: 303 KASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVAD-PIRWPNSPWRLLQV 361
Query: 335 QWDEPATVQRPERVSPWEIEPFVASAPL----NLAQPAVKSKRPRSIDIP 380
WDEP +Q +RVSPW +E V++ P+ + P K + P+ +D P
Sbjct: 362 TWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPPRKKLRLPQHLDFP 410
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV ++ VGR +DL+ L Y++L+ L MF I+ R V++ D G + GD
Sbjct: 600 KVFLESEDVGRTLDLSVLGSYEELYSRLANMFGIE---RSEMLHHVLYRDAAGAIRQTGD 656
Query: 613 DQWPEFCKMVKKIFI 627
+ + F K K++ I
Sbjct: 657 EPFSVFAKTAKRLTI 671
>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 700
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 193/374 (51%), Gaps = 45/374 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E + + +L P +P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
LA+ +TDEV A++ L P EP D P + SF K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAP-VRPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 206 LVAGDAFVFLRGENGELRVGVRR-----------LAHQQSSMPSSVI------------- 241
LVAGD+ VF+R NG+L VG+RR H Q
Sbjct: 199 LVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGE 258
Query: 242 ---SSQSMHLGVLATAAHAVKTSTL------FIVYYKPR--TSQFIIGLNKYLEAVHHCF 290
++ + VL V+ + L F V Y PR T +F + A+ +
Sbjct: 259 EDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQW 318
Query: 291 SVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPER 347
GMRFKM FE EDS F GT+ V V D +WP S WR L++ WDEP +Q +R
Sbjct: 319 CAGMRFKMAFETEDSSRISWFMGTVAAVQVAD-PIRWPNSPWRLLQVAWDEPDLLQNVKR 377
Query: 348 VSPWEIEPFVASAP 361
VSPW +E V+S P
Sbjct: 378 VSPWLVE-LVSSTP 390
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDD-EGDMMLAG 611
KV MQ VGR +DL+A+ Y++L+ L MF + R V + D G + AG
Sbjct: 623 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVD---RAELTSHVFYRDGASGALKHAG 679
Query: 612 DDQWPEFCKMVKKIFI 627
D+ + EF K +++ I
Sbjct: 680 DEPFSEFTKTARRLTI 695
>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
Length = 690
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/408 (38%), Positives = 205/408 (50%), Gaps = 55/408 (13%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE--PLFDLPSKILCRVVH 83
+LW ACAG +V++P RVYYF QGH E + E P LP +LCRV
Sbjct: 36 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPR-ALPPLVLCRVEG 94
Query: 84 IELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLP--------EPPKQTVHSFCKILTA 134
++ LA++++DEVYA+I L P + E R PD+ P EP + SF K LT
Sbjct: 95 VQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQ 154
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 155 SDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 214
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------- 228
TGWSTFV K+LVAGD+ VFLR +GEL VG+RR
Sbjct: 215 TGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFS 274
Query: 229 --LAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL------FIVYYKPR--TSQFIIG 278
L ++S + M A V+ ++L F V Y PR T F++
Sbjct: 275 AFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVVK 334
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQ 335
A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++
Sbjct: 335 AASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVAD-PNRWPNSPWRLLQVT 393
Query: 336 WDEPATVQRPERVSPWEIEPFVASAPLNL---AQPAVKSKRPRSIDIP 380
WDEP +Q + VSPW +E + P++L + P K + P D P
Sbjct: 394 WDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHPDFP 441
>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 206/408 (50%), Gaps = 65/408 (15%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E + S E H F +P+ I C+V
Sbjct: 8 LDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSV--EFGH----FQIPALIPCKVS 61
Query: 83 HIELLAEQETDEVYAQITLHP-------------ETDQTEPRSPDQCLPEPPKQTVHSFC 129
I+ +A+ ETDEVYA+I L P E + S ++ +P SF
Sbjct: 62 AIKYMADPETDEVYAKIRLIPLNNSDLMLGHGCGEDNDDRLHSGNESQEKPA-----SFA 116
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LT SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PR
Sbjct: 117 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPR 176
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR----LAHQQSSMPSSVISSQS 245
RHLLTTGWS FV K+LVAGD+ VFLR ENG+L VG+RR + + S + + S
Sbjct: 177 RHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYS 236
Query: 246 MHL-----------------------GVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLN 280
V+ A+ A VYY PR S +F + +
Sbjct: 237 GFFREDESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYY-PRASTPEFCVKAS 295
Query: 281 KYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWD 337
A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++ WD
Sbjct: 296 AVRSAIQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVAD-PIRWPNSPWRLLQVAWD 354
Query: 338 EPATVQRPERVSPWEIE-----PFVASAPLNLAQPAVKSKRPRSIDIP 380
EP + +RVSPW +E P + +P + P K + P+ D P
Sbjct: 355 EPDLLHNVKRVSPWLVELVSNMPAIHLSP--FSPPRKKLRLPQPPDFP 400
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ L Y++L +L MF I+ + V++ + G AGD
Sbjct: 587 KVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGIESSEMLSN---VLYRNAAGATKHAGD 643
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + EF K +++ I S N+
Sbjct: 644 EPFSEFLKTARRLTILSDASSDNVG 668
>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 644
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 196/394 (49%), Gaps = 41/394 (10%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 86 LLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
LA+ ETDEV+A+I L P E + EPR PE ++ + SF K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPRE-FGIDPEDAREKLSSFAKTLTQSDANNGG 131
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R A P LD P Q + AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT-------- 253
K+LVAGD+ VFLR E+GEL VG+RR + + G L+
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 254 ----------------------AAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHC 289
AA + F V Y PR T +F++ A+ +
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQ 311
Query: 290 FSVGMRFKMRFEGEDSPERR-FTGTIVG--VGDFSEQWPGSKWRSLKIQWDEPATVQRPE 346
+ GMRFKM FE EDS F GTI V D + +WP S WR L++ WDEP +Q +
Sbjct: 312 WCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLLQVSWDEPDLLQNVK 370
Query: 347 RVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIP 380
V+PW +E + P++L + K+ R P
Sbjct: 371 CVNPWLVEIVSSIPPIHLGTFSPPRKKLRVAQHP 404
>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
Length = 697
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 204/415 (49%), Gaps = 62/415 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YF QGH E A + PL ILCRVV ++
Sbjct: 10 QLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPPDFHAPRVPPL------ILCRVVSVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLP-EPPKQTVH----------SFCKILTA 134
LA+ ETDEV+A+ITL P D L PP V+ SF K LT
Sbjct: 64 FLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDVNVNGNGNEKPASFAKTLTQ 123
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 124 SDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLT 183
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-----------------------LAH 231
TGWSTFV K+L+AGD+ VFLR E+G+L VG+RR L
Sbjct: 184 TGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLGSDNPYPGFSGFLRD 243
Query: 232 QQSSMPSSVISSQSMHLGVLATAA------------HAVKTSTLFIVYYKPRTS--QFII 277
++S S ++ + A A F V Y PR S +F +
Sbjct: 244 DETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCV 303
Query: 278 GLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKI 334
A+ + GMRFKM FE EDS F GT+ V V D +WP S WR L++
Sbjct: 304 KAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRLLQV 362
Query: 335 QWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
WDEP +Q +RVSPW +E V++ P L+ P K + P+ + P + F
Sbjct: 363 AWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKIRIPQPFEFPFDGTKF 416
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G + GD
Sbjct: 589 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEE--RSDLLTHVVYRDANGAIKRIGD 646
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F K K++ I
Sbjct: 647 EPFSDFMKSTKRLTI 661
>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 197/384 (51%), Gaps = 58/384 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E + + + P ILCRV ++
Sbjct: 12 QLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPAL-----ILCRVAAVK 66
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR--------SPDQCLPEPPKQTVHSFCKILTASDT 137
LA+ ETDEVYA+I + P ++ S + E P +SF K LT SD
Sbjct: 67 FLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKP----NSFAKTLTQSDA 122
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHLLTTGW 182
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMP----------------SSVI 241
S+FV K+LVAGD+ VFLR ENGEL VG+RR P S+ +
Sbjct: 183 SSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSAFL 242
Query: 242 SSQSMHLGVLAT------------------AAHAVKTSTLFIVYYKPR--TSQFIIGLNK 281
+ G L + AAH + F V Y PR T +F + +
Sbjct: 243 REEMSKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPRANTPEFCVRASS 302
Query: 282 YLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDE 338
A+ + GMRFKM FE EDS F GTI + + D +WP S WR L++ WDE
Sbjct: 303 VNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLAD-PIRWPNSPWRLLQVAWDE 361
Query: 339 PATVQRPERVSPWEIEPFVASAPL 362
P +Q + VSPW +E V++ P+
Sbjct: 362 PDLLQNVKHVSPWLVE-LVSNMPV 384
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV ++ VGR +DL+ + Y++L+ L MF ++ RP V++ D G + GD
Sbjct: 592 KVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLE---RPDMLTRVLYHDATGAVKHTGD 648
Query: 613 DQWPEFCKMVKK--IFIYSTEEVK-----NMATSSKPIASS 646
+ + +F K K+ I + S+ +K +AT+ + + SS
Sbjct: 649 EPFSDFVKSAKRLTILMNSSSNIKRKWLTGLATAERGLDSS 689
>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 693
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 208/414 (50%), Gaps = 61/414 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YF QGH E A + PL ILCRVV ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVPPL------ILCRVVSVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP---------KQTVHSFCKILTASD 136
LA+ ETDEV+A+ITL P D L P K+ SF K LT SD
Sbjct: 64 FLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSD 123
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
+ GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 124 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 183
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL------AHQQSSMP------------S 238
WSTFV K+L+AGD+ VFLR E+G+L VG+RR ++ S P S
Sbjct: 184 WSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDES 243
Query: 239 SVISSQSMHL--------GVLATAAHAVKTSTL----------FIVYYKPRTS--QFIIG 278
+ +S+ M + AT V+ F V Y PR S +F +
Sbjct: 244 TTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCVK 303
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQ 335
A+ + GMRFKM FE EDS F GT+ V V D +WP S WR L++
Sbjct: 304 AADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRLLQVA 362
Query: 336 WDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
WDEP +Q +RVSPW +E V++ P L+ P K + P+ + P + F
Sbjct: 363 WDEPDLLQNVKRVSPWLVE-LVSNMPTIHLSPFSPRKKIRIPQPFEFPFHGTKF 415
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G + GD
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEE--RSDLLTHVVYRDANGVIKRIGD 641
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F K K++ I
Sbjct: 642 EPFSDFMKATKRLTI 656
>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
Length = 443
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 199/389 (51%), Gaps = 57/389 (14%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E + + + L +P ILCRV
Sbjct: 9 LDSQLWHACAGGMVQMPPMNSKVFYFPQGHAEHTLGNVDFSM-----LPKIPPLILCRVG 63
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH---SFCKILTASDTST 139
++ LA+ ETDEVYA+I L P EP D L +T SF K LT SD +
Sbjct: 64 AVKYLADVETDEVYAKIRLVP-VGNNEPEFEDAVLGSSASETAEKPTSFAKTLTQSDANN 122
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 123 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLLTTGWST 182
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR-----------------------------LA 230
FV K+LVAGD+ VFLR +NG+L VG+RR L
Sbjct: 183 FVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTGAPGSYGGFSAYLR 242
Query: 231 HQQSSMPSSVISSQSMHLG------------VLATAAHAVKTSTLFIVYYKPR--TSQFI 276
++ + + I+ G + AA+ T F V Y PR T +F
Sbjct: 243 EDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYPRANTPEFC 302
Query: 277 IGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLK 333
+ + A+ + G+RFKM FE EDS F GTI V V D WP S WR L+
Sbjct: 303 VRASSVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVAD-PIHWPNSPWRLLQ 361
Query: 334 IQWDEPATVQRPERVSPWEIEPFVASAPL 362
+ WDEP +Q + VSPW +E V++ P+
Sbjct: 362 VTWDEPDLLQNVKHVSPWLVE-LVSNMPM 389
>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
Length = 681
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 199/392 (50%), Gaps = 46/392 (11%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R+LW ACAG + VP G VYYFPQGH E EL+ +P+ + CRV +
Sbjct: 20 RQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAAR----VPALVPCRVASV 75
Query: 85 ELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+A+ +TDEV+A+I L P + D E D + SF K LT SD +
Sbjct: 76 RYMADPDTDEVFARIRLVPLRAAEDGDVEE----DGAAAGEEHEKPASFAKTLTQSDANN 131
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD P Q + AKD+HG W F+HI+RG PRRHLLTTGWST
Sbjct: 132 GGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWST 191
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------LAHQQS 234
FV K+LVAGD+ VFLRG+ G+L VG+RR L +
Sbjct: 192 FVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNA 251
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSV 292
S ++ + L AA F V Y PR T +F + A+ +
Sbjct: 252 SPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCP 311
Query: 293 GMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVS 349
GMRFKM FE EDS F GT+ V V D +WP S WR L++ WDEP +Q +RVS
Sbjct: 312 GMRFKMAFETEDSSRISWFMGTVASVQVAD-PIRWPQSPWRLLQVTWDEPDLLQNVKRVS 370
Query: 350 PWEIEPFVASAP-LNLAQPAVKSKRPRSIDIP 380
PW +E V+S P +NL+ + K+PR + P
Sbjct: 371 PWLVE-LVSSMPAINLSSFSPPRKKPRILAYP 401
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRDKWAVVFTDDEGDMML 609
+ KV ++ VGR +DL++L ++ L+ L +MF I +LR R V++ G++
Sbjct: 597 QCKVFIESDTVGRNLDLSSLASFEQLYGRLSEMFCIDSAELRSR----VLYRGATGEVRH 652
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
AGD+ + EF K+ +++ I + N+ +
Sbjct: 653 AGDEPFSEFIKLARRLTILTDAGSDNLGS 681
>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 701
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 158/419 (37%), Positives = 205/419 (48%), Gaps = 83/419 (19%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P+ +V+YFPQGH E A TN L LP ILC V ++
Sbjct: 11 QLWHACAGGMVQMPQMNSKVFYFPQGHAEH--AHTNIHLR-------LPPFILCNVEAVK 61
Query: 86 LLAEQETDEVYAQITLHP--------------ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
+A ETDEV+A+++L P D EP C +P SF K
Sbjct: 62 FMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEP----SCCEKPA-----SFAKT 112
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LT SD + GGFSV R A P LD T P Q + AKD+HG WRF+HI+RG PRRH
Sbjct: 113 LTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRH 172
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR----------------------- 228
LLTTGWS+FV K+LVAGD+ VFLR ENG+L VG+RR
Sbjct: 173 LLTTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVWSSASGS 232
Query: 229 ----------------LAHQQSSMPSSVISSQSMHLGVLA----TAAHAVKTSTLFIVYY 268
L + + + + S + V A A ++ F V Y
Sbjct: 233 GNGNCGIGPYGPFSFFLKEENKMLRNGCGGNLSGRVKVRAEDVVEAVTLAASNKPFEVVY 292
Query: 269 KPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE-QW 324
PR S +F + + A+ + GMRFKM FE ED+ F GTI V +W
Sbjct: 293 YPRASTPEFCVKASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVVDPIRW 352
Query: 325 PGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL-NLA--QPAVKSKRPRSIDIP 380
P S WR L++ WDEP +Q +RVSPW +E V++ PL N P K RP+ D P
Sbjct: 353 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNIPLINFTPFSPPRKKLRPQHPDFP 410
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV ++ VGR +DL+ Y+DL+ L MF I+ R V++ D G G+
Sbjct: 593 KVFLESEDVGRTLDLSLFGSYEDLYRRLAIMFGIE---RSEILNHVLYHDAAGAAKKTGE 649
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNM 636
+ + +F K K++ I + KN+
Sbjct: 650 EPFSDFMKTAKRLTILTDSSSKNI 673
>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 688
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 208/420 (49%), Gaps = 63/420 (15%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L LW ACAG +V++P +V+YFPQGH E + + + P F I C+V
Sbjct: 14 LDSRLWHACAGGMVQMPVVNAKVFYFPQGHAEHACGPVDFRVYPKIPPF-----IQCKVG 68
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLP----EPPKQTVHSFCKILTASDTS 138
I+ +A+ ETDEVY ++ L P T + E D + K SF K LT SD +
Sbjct: 69 AIKYMADPETDEVYVKLRLVPLT-RNEGDFEDDAVGGINGSENKDKSPSFAKTLTQSDAN 127
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 128 NGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 187
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS------------------SMPSSV 240
+FV K+LVAGD+ VFLR E +LRVG+RR MP
Sbjct: 188 SFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNSGGGIRPMPYGG 247
Query: 241 IS-------SQSMHLGVLATAAHAVKTSTL------------FIVYYKPRTS--QFIIGL 279
S SQ + G+ A V+ + F V Y PR S +F +
Sbjct: 248 FSAFLREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQPFEVVYYPRASAPEFCVKA 307
Query: 280 NKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSEQWPGSKWRSLKIQWDE 338
N A+ + GMRFKM FE EDS F GTI V +WP S WR L++ WDE
Sbjct: 308 NLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADPRWPNSPWRLLQVTWDE 367
Query: 339 PATVQRPERVSPWEIEPFVASAP-LNLAQPAVKSKRPR-----------SIDIPASASAF 386
P +Q +RVSPW +E V++ P ++L+ + + K+PR I +PA S F
Sbjct: 368 PELLQNVKRVSPWLVE-IVSNMPTIHLSHYSTQQKKPRFPQHPDFSFDGQISLPAFPSNF 426
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 497 DPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQM 556
DPT S G+A F L + + + Q K+ A+ KV M
Sbjct: 549 DPTRNNS-FDGNADKMCKFSDGFGYALHPQGSSLERLQWYKDQQKETMASLETGHCKVFM 607
Query: 557 QGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW- 615
+ +GR +DLT L YD+L+ +L MF I+ + +++ D G + GD+ +
Sbjct: 608 ESEDIGRTMDLTMLGSYDELYRKLADMFGIEKSVVLSH---MLYRDTTGAVKHIGDEAFS 664
Query: 616 -PEFCKMVKKIFI 627
EF K +++ I
Sbjct: 665 CSEFTKTARRLTI 677
>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
Length = 702
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 204/412 (49%), Gaps = 62/412 (15%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E S + + LP ILCRV
Sbjct: 20 LDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSVDFRNFPR-----LPPYILCRVS 74
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQ----CLPEPPKQTVHSFCKILTASDTS 138
I+ +A+ ETDEVYA+I L P + ++ E + SF K LT SD +
Sbjct: 75 GIKFMADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQENKPASFAKTLTQSDAN 134
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 135 NGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 194
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRL--------------AHQQSSMPSSVISSQ 244
TFV K+LVAGD+ VFLR ENG+L +G+RR A MP +S
Sbjct: 195 TFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGNCVMPYGGFNSF 254
Query: 245 SMHLG---------------------------VLATAAHAVKTSTLFIVYYKPR--TSQF 275
G V+ A A +VYY PR T +F
Sbjct: 255 FREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVYY-PRASTPEF 313
Query: 276 IIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSL 332
+ + A + GMRFKM FE EDS F GTI V V D +WP S WR L
Sbjct: 314 CVKASMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVAD-PLRWPDSPWRLL 372
Query: 333 KIQWDEPATVQRPERVSPWEIEPFVASAPL----NLAQPAVKSKRPRSIDIP 380
++ WDEP +Q +RVSPW +E V++ P+ + P K + P+ D P
Sbjct: 373 QVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPPRKKLRMPQHPDFP 423
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 479 IDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKE- 537
I L + +T +P+ TG S +G+ ++F L + +G+ + S E
Sbjct: 549 ISLSSSGDTVSPV-------LTGNSSSEGNLDKIANFSDGSGSALHQ--QGLPEHSSYEG 599
Query: 538 ----TQNKQGSAASTRT-RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
N+Q + S T KV M+ VGR +DL+ L YD+L+ +L MF I+
Sbjct: 600 FQWCKGNRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIENSETL 659
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ V++ D G + GD+ + +F K +++ I N+
Sbjct: 660 NN---VLYRDIAGIVKHIGDEPFSDFMKTARRLTIIMDSSSDNVG 701
>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
Length = 222
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 142/205 (69%), Gaps = 6/205 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y +LWK CAGPL ++P+ GE+VYYFPQGHIE +EAST +EL +P DLPSK+ CRV+
Sbjct: 24 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 83
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
I L E +DE Y +ITL P+T Q + ++ P V+SF K+LTASDTS G
Sbjct: 84 AIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRP---IVNSFTKVLTASDTSAQGE 140
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV KHA ECLPPLDM+ P QEL A DLHG +WRFKH +R PR TTGW+ F T
Sbjct: 141 FSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTT 197
Query: 203 SKRLVAGDAFVFLRGENGELRVGVR 227
SK+LV GD VF RGE GELRVG+R
Sbjct: 198 SKKLVVGDVIVFARGETGELRVGIR 222
>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 197/384 (51%), Gaps = 58/384 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E + + + P ILCRV ++
Sbjct: 12 QLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPAL-----ILCRVAAVK 66
Query: 86 LLAEQETDEVYAQITLHPETDQTEPR--------SPDQCLPEPPKQTVHSFCKILTASDT 137
LA+ ETDEVYA+I + P ++ S + E P +SF K LT SD
Sbjct: 67 FLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKP----NSFAKTLTQSDA 122
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLTTGW 182
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMP----------------SSVI 241
S+FV K+LVAGD+ VFLR ENGEL VG+RR P S+ +
Sbjct: 183 SSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSAFL 242
Query: 242 SSQSMHLGVLAT------------------AAHAVKTSTLFIVYYKPR--TSQFIIGLNK 281
+ G L + AA+ + F V Y PR T +F + +
Sbjct: 243 REEMSKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPRANTPEFCVRASS 302
Query: 282 YLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDE 338
A+ + GMRFKM FE EDS F GTI + + D +WP S WR L++ WDE
Sbjct: 303 VNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLAD-PIRWPNSPWRLLQVAWDE 361
Query: 339 PATVQRPERVSPWEIEPFVASAPL 362
P +Q + VSPW +E V++ P+
Sbjct: 362 PDLLQNVKHVSPWLVE-LVSNMPV 384
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV ++ VGR +DL+ + Y++L+ L MF ++ RP V++ D G + GD
Sbjct: 592 KVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLE---RPDMLTRVLYHDATGAVKHTGD 648
Query: 613 DQWPEFCKMVKK--IFIYSTEEVK-----NMATSSKPIASS 646
+ + +F K K+ I + S+ +K +AT+ + + SS
Sbjct: 649 EPFSDFVKSAKRLTILMNSSSNIKRKWLTGLATAERGLDSS 689
>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
Length = 336
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 154/232 (66%), Gaps = 7/232 (3%)
Query: 147 RKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 206
R+ A +C PPLD P+QEL AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKL 61
Query: 207 VAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIV 266
V+GDA +FLR +GELR+GVRR A ++ SQ +++ + +A+ ++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVNAISSTNAFSI 121
Query: 267 YYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-Q 323
Y PR S FII +K+ + + H FS GMRFKMR E ED+ E+RFTG +VGV D +
Sbjct: 122 CYNPRASSSGFIIPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVR 181
Query: 324 WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL--NLAQPAVKSKR 373
WPGSKWR L ++WD+ V R RVSPWEIEP SAP+ +L P+ K R
Sbjct: 182 WPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP-SGSAPVSSSLVMPSAKRTR 231
>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
Length = 711
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 155/393 (39%), Positives = 206/393 (52%), Gaps = 44/393 (11%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQ-LEASTNQELTHQEPLFDLPSKILCRVVH 83
R+LW ACAG + VP G VYYFPQGH E L + +L+ +P+ + CRV
Sbjct: 21 RQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSAAR----VPALVPCRVTA 76
Query: 84 IELLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+ +A+ +TDEV+A+I L P + D D ++ SF K LT SD +
Sbjct: 77 VRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPASFAKTLTQSDANN 136
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 137 GGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTGWST 196
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS-----SVISSQSMHLGVL--- 251
FV K+LVAGD+ VFLRG++G+L VG+RR S + + G++
Sbjct: 197 FVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHYAGLMRGN 256
Query: 252 ------ATAAHAVKTSTL------------FIVYYKPR--TSQFIIGLNKYLEAVHHCFS 291
A A V+ + F V Y PR T +F + A+ +S
Sbjct: 257 VSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVRAAAVRVAMRVQWS 316
Query: 292 VGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVS 349
GMRFKM FE EDS F GT+ GV +WP S WR L++ WDEP +Q +RVS
Sbjct: 317 PGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVS 376
Query: 350 PWEIEPFVASAP-LNLAQPAVKSKRPRSIDIPA 381
PW +E V+S P ++LA + K+PR IPA
Sbjct: 377 PWLVE-LVSSMPAIHLASFSPPRKKPR---IPA 405
>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
Length = 689
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/393 (39%), Positives = 206/393 (52%), Gaps = 44/393 (11%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQ-LEASTNQELTHQEPLFDLPSKILCRVVH 83
R+LW ACAG + VP G VYYFPQGH E L + +L+ +P+ + CRV
Sbjct: 21 RQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSAAR----VPALVPCRVTA 76
Query: 84 IELLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+ +A+ +TDEV+A+I L P + D D ++ SF K LT SD +
Sbjct: 77 VRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPASFAKTLTQSDANN 136
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 137 GGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTGWST 196
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS-----SVISSQSMHLGVL--- 251
FV K+LVAGD+ VFLRG++G+L VG+RR S + + G++
Sbjct: 197 FVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHYAGLMRGN 256
Query: 252 ------ATAAHAVKTSTL------------FIVYYKPR--TSQFIIGLNKYLEAVHHCFS 291
A A V+ + F V Y PR T +F + A+ +S
Sbjct: 257 VSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVRAAAVRVAMRVQWS 316
Query: 292 VGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVS 349
GMRFKM FE EDS F GT+ GV +WP S WR L++ WDEP +Q +RVS
Sbjct: 317 PGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVS 376
Query: 350 PWEIEPFVASAP-LNLAQPAVKSKRPRSIDIPA 381
PW +E V+S P ++LA + K+PR IPA
Sbjct: 377 PWLVE-LVSSMPAIHLASFSPPRKKPR---IPA 405
>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
Group]
Length = 599
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 165/254 (64%), Gaps = 16/254 (6%)
Query: 116 CLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPL------------DMTLAT 163
C E + H FCK LTASDTSTHGGFSV R+ A +C PPL D
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVR 80
Query: 164 PTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELR 223
P+QEL A DLHG +W+F+HI+RGQPRRHLLT GWS+FV K+LV+GDA +FLRG++G+LR
Sbjct: 81 PSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLR 140
Query: 224 VGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNK 281
+GVRR ++ ++S L +L++ A +++ ++F + + PR+ S+FI+ +
Sbjct: 141 LGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWR 200
Query: 282 YLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPA 340
L++++H FS+GMRF++ +E ED+ ER G I G+ + +WPGS+W+ L ++WD+
Sbjct: 201 LLKSLNHPFSIGMRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDST 259
Query: 341 TVQRPERVSPWEIE 354
RVSPWEIE
Sbjct: 260 DSSHQNRVSPWEIE 273
>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 647
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 201/408 (49%), Gaps = 62/408 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E N + + P F + CRVV ++
Sbjct: 21 QLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVNFKTCPKVPPF-----VPCRVVAVK 75
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
+A+ ETDEVYA++ L P D E + SF K LT SD + GGFSV
Sbjct: 76 YMADPETDEVYAKLKLVPLNANDVDYDHDVIGAET-RDKPASFAKTLTQSDANNGGGFSV 134
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 135 PRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 194
Query: 206 LVAGDAFVFLRGENGELRVGVRRL----------------AHQQSSMPSSVIS------- 242
LVAGD+ VFLR ENG+L VG+RR A MP S S
Sbjct: 195 LVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPYSGFSPFLREDD 254
Query: 243 --------SQSMHLGV------------LATAAHAVKTSTLFIVYYKPR--TSQFIIGLN 280
S ++ V + AA+ F V Y PR T +F + +
Sbjct: 255 NRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVYYPRASTPEFCVKAS 314
Query: 281 KYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWD 337
A+ + G+RFKM FE EDS F GTI V V D WP S WR L++ WD
Sbjct: 315 LVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVAD-PLNWPNSPWRLLQVTWD 373
Query: 338 EPATVQRPERVSPWEIE-----PFVASAPLNLAQPAVKSKRPRSIDIP 380
EP +Q RVSPW +E P + +P + P K + P+ D P
Sbjct: 374 EPDLLQNVRRVSPWLVELVSNMPAIHFSP--FSPPRKKLRLPQHPDFP 419
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 540 NKQGSAASTRT-RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRDKWA 597
N Q A+ T KV M+ VGR +DL+ L+ YD+L +L MF I+ ++ R
Sbjct: 551 NHQEIEANMETGHCKVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIEKSEMLSR---- 606
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
V++ D G + GD+ + +F + K++ I N+
Sbjct: 607 VLYCDSVGAIKHIGDEPFSDFTRTAKRLTILMDSGSNNVGV 647
>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
Length = 695
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 194/397 (48%), Gaps = 58/397 (14%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G G G + +LW ACAG + VP G VYYFPQGH EQ A+ + PL
Sbjct: 9 GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSARVPPL------ 62
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHP------------ETDQTEPRSPDQCLPEPPKQT 124
+ CRVV + +A+ E+DEV+A+I L P R + P P
Sbjct: 63 VPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRP---- 118
Query: 125 VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIF 184
SF K LT SD + GGFSV R A P LD + P Q + AKD+HG EW F+HI+
Sbjct: 119 -TSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIY 177
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS-----S 239
RG PRRHLLTTGWS FV K+L AGD+ VF+R E G + VG+RR S+ S
Sbjct: 178 RGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLS 237
Query: 240 VISSQSMHLGVL------------------------ATAAHAVKTSTLFIVYYKPR--TS 273
I + G++ TAA T F V Y PR T
Sbjct: 238 SIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTP 297
Query: 274 QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGV-GDFSEQWPGSKWRS 331
+F + A+ + GMRFKM FE EDS F GT+ GV +WP S WR
Sbjct: 298 EFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRL 357
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
L++ WDEP +Q +RV PW +E V+S P NL P+
Sbjct: 358 LQVTWDEPELLQNVKRVCPWLVE-LVSSMP-NLHLPS 392
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI-QGQLRPRDKWAVVFTDDEGDMML 609
+ KV ++ VGR++DL+AL +++L+ L MF I +LR +V+ G++
Sbjct: 611 QCKVFVESETVGRSLDLSALSSFEELYACLSDMFSIGSDELRSH----LVYRSPAGEVKH 666
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
AGD+ + F K +K+ I + N+
Sbjct: 667 AGDEPFCAFVKSARKLRILTDAGSDNLG 694
>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
Length = 699
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 194/397 (48%), Gaps = 58/397 (14%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G G G + +LW ACAG + VP G VYYFPQGH EQ A+ + PL
Sbjct: 13 GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSARVPPL------ 66
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHP------------ETDQTEPRSPDQCLPEPPKQT 124
+ CRVV + +A+ E+DEV+A+I L P R + P P
Sbjct: 67 VPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRP---- 122
Query: 125 VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIF 184
SF K LT SD + GGFSV R A P LD + P Q + AKD+HG EW F+HI+
Sbjct: 123 -TSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIY 181
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS-----S 239
RG PRRHLLTTGWS FV K+L AGD+ VF+R E G + VG+RR S+ S
Sbjct: 182 RGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLS 241
Query: 240 VISSQSMHLGVL------------------------ATAAHAVKTSTLFIVYYKPR--TS 273
I + G++ TAA T F V Y PR T
Sbjct: 242 SIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTP 301
Query: 274 QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGV-GDFSEQWPGSKWRS 331
+F + A+ + GMRFKM FE EDS F GT+ GV +WP S WR
Sbjct: 302 EFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRL 361
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
L++ WDEP +Q +RV PW +E V+S P NL P+
Sbjct: 362 LQVTWDEPELLQNVKRVCPWLVE-LVSSMP-NLHLPS 396
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI-QGQLRPRDKWAVVFTDDEGDMML 609
+ KV ++ VGR++DL+AL +++L+ L MF I +LR +V+ G++
Sbjct: 615 QCKVFVESETVGRSLDLSALSSFEELYACLSDMFSIGSDELRSH----LVYRSPAGEVKH 670
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
AGD+ + F K +K+ I + N+
Sbjct: 671 AGDEPFCAFVKSARKLRILTDAGSDNLG 698
>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 670
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 199/390 (51%), Gaps = 40/390 (10%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +V+YFPQGH E +++ + +P ILCRV ++
Sbjct: 11 QLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSNVDFGAAR----IPIPPLILCRVAAVK 66
Query: 86 LLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFS 144
LA+ ETDEV+A++ L P + + D + SF K LT SD + GGFS
Sbjct: 67 FLADPETDEVFARLRLVPLRNSELDYEDSDANGEAEGSEKPASFAKTLTQSDANNGGGFS 126
Query: 145 VLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 204
V R A P LD + P Q + A+D+HG W+F+HI+RG PRRHLLTTGWS+FV K
Sbjct: 127 VPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQK 186
Query: 205 RLVAGDAFVFLRGENGELRVGVRRLAHQQSSMP----------------------SSVIS 242
+LVAGD+ VFLR ENG+L VG+RR P S +
Sbjct: 187 KLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGPYGAFSGFMR 246
Query: 243 SQSMHLGV----LATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRF 296
+S V + A ++ F V Y PR T +F I + A+ + GMRF
Sbjct: 247 EESGRAKVSGESVREAVTLAASNQAFEVVYYPRANTPEFCIRTSAVRGAMRIQWCSGMRF 306
Query: 297 KMRFEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
KM FE EDS F GTI V +WP S WR L++ WDEP + +RVSPW +E
Sbjct: 307 KMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDLLHNVKRVSPWLVE 366
Query: 355 PFVASAPL----NLAQPAVKSKRPRSIDIP 380
V++ P+ + P K + P + P
Sbjct: 367 -LVSNVPIIHLAAFSPPRKKLRFPLDVQFP 395
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEG 605
S + KV M+ VGR +DL+ L Y +L+ L MF I+ R V++ D G
Sbjct: 554 GSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIE---RSDMLSHVLYCDSSG 610
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKN 635
+ G++ + EF K K++ I + K+
Sbjct: 611 ALKQIGEEPFSEFMKTAKRLTILTDSNNKD 640
>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
Length = 647
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/398 (37%), Positives = 201/398 (50%), Gaps = 50/398 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +V+YFPQGH E + + + P+ P+ +LCRV ++
Sbjct: 12 QLWHACAGSMVQIPPVNSKVFYFPQGHAEH--SLYPVDFSSSPPI---PALLLCRVASVK 66
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH---SFCKILTASDTSTHGG 142
LA+ ETDEVYA+I L P + TEP + + V SF K LT SD + GG
Sbjct: 67 FLADAETDEVYAKIMLVPLPN-TEPDLENDAVFGGGSDNVEKPASFAKTLTQSDANNGGG 125
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R A P LD T P Q + A+D+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 126 FSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHLLTTGWSSFVN 185
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV------ISSQSMHLGVLATAAH 256
K+LVAGD+ VFLR ENGEL VG+RR + S +S G L
Sbjct: 186 HKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSPYGGFSGFLKEDES 245
Query: 257 AV------------------------KTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCF 290
+ F + Y PR T +F + + A+ +
Sbjct: 246 KITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYYPRASTPEFCVKASAVRAAMRVPW 305
Query: 291 SVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPER 347
MRFKM FE ED F GT+ V + D +WP S WR L++ WDEP +Q ER
Sbjct: 306 CSLMRFKMAFETEDCSRISWFMGTVSSVHIAD-PLRWPNSPWRLLQVTWDEPDLLQNVER 364
Query: 348 VSPWEIEPF-----VASAPLNLAQPAVKSKRPRSIDIP 380
VSPW +E V +P + P K + P+ +D P
Sbjct: 365 VSPWLVELVPNMLPVHLSPFSTVTPRKKLRLPKHLDFP 402
>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
Length = 336
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 153/232 (65%), Gaps = 7/232 (3%)
Query: 147 RKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 206
R+ A +C PPLD P+QEL AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKKL 61
Query: 207 VAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIV 266
V+GDA +FLR +GELR+GVRR A ++ SQ +++ + A+ ++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAFSI 121
Query: 267 YYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-Q 323
Y PR S FI+ +K+ + + H FS GMRFKMR E ED+ E+RFTG +VGV D +
Sbjct: 122 CYNPRASSSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVR 181
Query: 324 WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL--NLAQPAVKSKR 373
WPGSKWR L ++WD+ V R RVSPWEIEP SAP+ +L P+ K R
Sbjct: 182 WPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP-SGSAPVSSSLVMPSAKRTR 231
>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 698
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 207/409 (50%), Gaps = 63/409 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RV+YFPQGH E A + + +PS LCRV I+
Sbjct: 21 QLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDFRNCPK-----VPSYTLCRVSAIK 75
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCL-----PEPPKQTVHSFCKILTASDTSTH 140
LA+ +TDEV+A++ L P + +E D + E K T SF K LT SD +
Sbjct: 76 FLADPDTDEVFAKLRLIP-INGSELDFEDDGIGRLNGSEQDKPT--SFAKTLTQSDANNG 132
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 133 GGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTF 192
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI------------------- 241
V K+LVAGD+ VFLR ENG+L VG+RR P S
Sbjct: 193 VNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAF 252
Query: 242 ----------SSQSMH-----LG-------VLATAAHAVKTSTLFIVYYKPRTS--QFII 277
S+ M+ +G + AA F + + PR S +F +
Sbjct: 253 LREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRASTPEFCV 312
Query: 278 GLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKI 334
A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++
Sbjct: 313 KAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSD-PLRWPESPWRLLQV 371
Query: 335 QWDEPATVQRPERVSPWEIEPFVASAPLNLA---QPAVKSKRPRSIDIP 380
WDEP +Q +RVSPW +E + +P++LA P K + P+ D P
Sbjct: 372 TWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQHPDFP 420
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL++L Y++L+ +L MF I V++ D G + GD
Sbjct: 616 KVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGIDNSETLNH---VLYRDVSGAVKHVGD 672
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMA 637
+Q+ +F K +++ I + N+
Sbjct: 673 EQFSDFIKTARRLTILTDSGSNNVG 697
>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 202/418 (48%), Gaps = 70/418 (16%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP--SKILCR 80
L +LW ACAG +V++P +V+YFPQGH E + +LP S LCR
Sbjct: 19 LDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVD--------FRNLPGASHTLCR 70
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTA 134
V I+ +A+ ETDEV+A+I L P + K+ H SF K LT
Sbjct: 71 VSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVSFAKTLTQ 130
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD T P Q L AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLT 190
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV-------------- 240
TGWS FV K+LVAGD+ VFLR ENG+L VGVRR S P S+
Sbjct: 191 TGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNLVVPYGG 250
Query: 241 ---ISSQSMH-------------------LG--------VLATAAHAVKTSTLFIVYY-K 269
S + H +G V+ A A VYY +
Sbjct: 251 FGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFETVYYPR 310
Query: 270 PRTSQFII--GLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSEQ-WP 325
T +F + L K + + C GMRFKM FE EDS F GT+ V D WP
Sbjct: 311 ANTPEFFVKASLVKTVMQIRWC--SGMRFKMAFETEDSSRISWFMGTVCSVQDADPLCWP 368
Query: 326 GSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNL---AQPAVKSKRPRSIDIP 380
GS WR L++ WDEP +Q +RVSPW +E + ++L + P K + P+ D P
Sbjct: 369 GSPWRLLQVTWDEPDLLQNVKRVSPWLVELASHMSAIHLSPFSSPRKKLRLPQHPDFP 426
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWA-VVFTDDEGDMMLAG 611
KV ++ VGR +DL L+ Y++L+ +L MF LR +K++ +++ DD G G
Sbjct: 623 KVFLESEDVGRTLDLQLLESYEELYRKLADMF----GLRNSEKFSNLLYRDDNGITKHIG 678
Query: 612 DDQWPEFCKMVKKIFIYS 629
++ + F K +++ I +
Sbjct: 679 EEPFSNFSKTARRLTIVT 696
>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 701
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 207/409 (50%), Gaps = 63/409 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RV+YFPQGH E A + + +PS LCRV I+
Sbjct: 21 QLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDFRNCPK-----VPSYTLCRVSAIK 75
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCL-----PEPPKQTVHSFCKILTASDTSTH 140
LA+ +TDEV+A++ L P + +E D + E K T SF K LT SD +
Sbjct: 76 FLADPDTDEVFAKLRLIP-INGSELDFEDDGIGRLNGSEQDKPT--SFAKTLTQSDANNG 132
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 133 GGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTF 192
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI------------------- 241
V K+LVAGD+ VFLR ENG+L VG+RR P S
Sbjct: 193 VNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAF 252
Query: 242 ----------SSQSMH-----LG-------VLATAAHAVKTSTLFIVYYKPRTS--QFII 277
S+ M+ +G + AA F + + PR S +F +
Sbjct: 253 LREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRASTPEFCV 312
Query: 278 GLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKI 334
A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++
Sbjct: 313 KAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSD-PLRWPESPWRLLQV 371
Query: 335 QWDEPATVQRPERVSPWEIEPFVASAPLNLA---QPAVKSKRPRSIDIP 380
WDEP +Q +RVSPW +E + +P++LA P K + P+ D P
Sbjct: 372 TWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQHPDFP 420
>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
Length = 590
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 196/379 (51%), Gaps = 48/379 (12%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P RV+YFPQGH E + + + + + I C+V
Sbjct: 22 LDSQLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDFGRCQ------ISAMIPCKVS 75
Query: 83 HIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLP-----EPPKQTVHSFCKILTAS 135
I+ LA+ ETDEVYA+I L P D+ S D C ++ SF K LT S
Sbjct: 76 AIKYLADPETDEVYAKIRLIPLIDRDVFLENSGDDCDDGLYNGAESQEKPASFAKTLTQS 135
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
D + GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 136 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTT 195
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH---QQSSMPSSVISSQSMHLGVL- 251
GWS FV K+LVAGD+ VFLR +NG+L VG+RR + PS S G L
Sbjct: 196 GWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWNSFGGYAAGFLR 255
Query: 252 ------------------ATAAHAVKTSTL------FIVYYKPRTS--QFIIGLNKYLEA 285
++ +TL F + Y PR S +F + + A
Sbjct: 256 EDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYYPRASTPEFCVRASAVRAA 315
Query: 286 VHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATV 342
+ + GMRFKM FE EDS F GTI V V D +WP S WR L++ WDEP +
Sbjct: 316 MQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVAD-PIRWPNSPWRLLQVAWDEPDLL 374
Query: 343 QRPERVSPWEIEPFVASAP 361
Q +RVSPW +E VA+ P
Sbjct: 375 QNVKRVSPWLVE-LVANMP 392
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ L Y++L+ +L MFEI+ +V++ D G + GD
Sbjct: 508 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIENSDMLS---SVLYRDAAGAIKRTGD 564
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + EF K +++ I + +N+A
Sbjct: 565 EPFSEFLKTARRLTILTDSGSENIA 589
>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
Length = 681
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 200/393 (50%), Gaps = 49/393 (12%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R+LW ACAG + VP G VYYFPQGH E EL+ +P+ + CRV +
Sbjct: 20 RQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAAR----VPALVPCRVASV 75
Query: 85 ELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+A+ +TDEV+A+I L P + D E D + SF K LT SD +
Sbjct: 76 RYMADPDTDEVFARIRLVPLRAAEDGDVEE----DGAAAGEEHEKPASFAKTLTQSDANN 131
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD P Q + AKD+HG W F+HI+RG PRRHLLTTGWST
Sbjct: 132 GGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWST 191
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------LAHQQS 234
FV K+LVAGD+ VFLRG+ G+L VG+RR L +
Sbjct: 192 FVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNA 251
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSV 292
S ++ + + AA F V Y PR T +F + A+ +
Sbjct: 252 SPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCP 311
Query: 293 GMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVS 349
GMRFKM FE EDS F GT+ V V D +WP S WR L++ WDEP +Q +RVS
Sbjct: 312 GMRFKMAFETEDSSRISWFMGTVASVQVAD-PIRWPQSPWRLLQVTWDEPDLLQNVKRVS 370
Query: 350 PWEIEPFVASAP-LNLAQPAVKSKRPRSIDIPA 381
PW +E V+S P ++L+ + K+PR IPA
Sbjct: 371 PWLVE-LVSSMPAIHLSSFSPPRKKPR---IPA 399
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRDKWAVVFTDDEGDMML 609
+ KV ++ VGR +DL++L ++ L+ L +MF I +LR R V++ G++
Sbjct: 597 QCKVFIESDTVGRNLDLSSLASFEQLYGRLSEMFCIDSAELRSR----VLYRGATGEVRH 652
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
AGD+ + EF K+ +++ I + N+ +
Sbjct: 653 AGDEPFSEFIKLARRLTILTDAGSDNLGS 681
>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
Length = 683
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 192/379 (50%), Gaps = 63/379 (16%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V +P RV YFPQGH E A N + + +P +LCRV ++
Sbjct: 18 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNPR----IPPLVLCRVSAVK 71
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCL--------PEPPKQTVHSFCKILTASDT 137
LA+ E+DEVYA+I L P + TE + D L PE P SF K LT SD
Sbjct: 72 YLADPESDEVYAKIRLIPLRN-TEGETEDDVLMGGNGIEAPEKPA----SFAKTLTQSDA 126
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A P LD + P Q + AKD+HG WRF+HI+RG PRRHLLTTGW
Sbjct: 127 NNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTTGW 186
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV----------ISSQSMH 247
S FV K LVAGD+ VFLR ENG+L VG+RR A + P S S +
Sbjct: 187 SNFVNKKNLVAGDSIVFLRAENGDLCVGIRR-AKRAGCGPESPSGWNPASGNGTSPYRGY 245
Query: 248 LGVL---------------------------ATAAHAVKTSTLFIVYYKPR--TSQFIIG 278
G L A AA F++ Y PR T +F +
Sbjct: 246 SGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVK 305
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQ 335
+ A+ + GM+FKM FE +DS F G I V V D +WP S WR L++
Sbjct: 306 ASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVND-PIRWPNSPWRLLQVT 364
Query: 336 WDEPATVQRPERVSPWEIE 354
WDEP +Q +RV+PW +E
Sbjct: 365 WDEPDLLQNVKRVNPWLVE 383
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ L Y++L+ +L MF I+ R V++ D+ G + GD
Sbjct: 604 KVFMESEDVGRTLDLSILGSYEELYRKLANMFGIE---RAEMLSNVLYRDEAGIVKHIGD 660
Query: 613 DQWPEFCKMVKKIFIYS 629
+ EF K +++ I +
Sbjct: 661 APFGEFLKTARRLTILA 677
>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
Length = 619
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 204/407 (50%), Gaps = 63/407 (15%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E + T PL I CR+
Sbjct: 16 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHNKVDFSKTRVPPL------IPCRIS 69
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL--------PEPPKQTVHSFCKILTA 134
++ +A+ ETDEVY ++ L P + E + C E P SF K LT
Sbjct: 70 AMKYMADPETDEVYVKMKLTP-LRENELDFEEDCFFGNNGLESQEKPA----SFAKTLTQ 124
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 125 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLT 184
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH-------QQSSMPSSVISSQSMH 247
TGWS FV K+LVAGD+ VFLR ENG+L VG+RR Q S SS + S
Sbjct: 185 TGWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSPL 244
Query: 248 LG----------------------------VLATAAHAVKTSTLFIVYYKPRTS--QFII 277
G V+ AV + +VYY PR S +F +
Sbjct: 245 FGGVGSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYY-PRASTPEFCV 303
Query: 278 GLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKI 334
++ A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++
Sbjct: 304 KVSSVKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQD-PIRWPDSPWRLLQV 362
Query: 335 QWDEPATVQRPERVSPWEIEPFVASAP-LNLAQPAVKSKRPRSIDIP 380
WDEP +Q + V+PW +E V++ P NL+ K+PR I P
Sbjct: 363 VWDEPDLLQNVKCVNPWLVE-LVSNMPNFNLSPFTPPRKKPRFIQDP 408
>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
Length = 647
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 216/426 (50%), Gaps = 53/426 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V +P +V+YFPQGH E A + + + +P +LCRV+ I+
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAEN--AYDHVDFKN----LPIPPMVLCRVLAIK 72
Query: 86 LLAEQETDEVYAQITLHPETDQT-EPRSPDQC--LPEPPKQTVHSFCKILTASDTSTHGG 142
+A+ E+DEV+A++ L P D E R ++ L + SF K LT SD + GG
Sbjct: 73 YMADPESDEVFAKLKLIPLKDNDHEYRDGEESNGLGSNNSEKTPSFAKTLTQSDANNGGG 132
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS FV
Sbjct: 133 FSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSNFVN 192
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRR--------------------------LAHQQSSM 236
K+LVAGD+ VF+R ENG+L VG+RR L
Sbjct: 193 QKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYSSLLRDDERR 252
Query: 237 PSSVISSQSMHL---GVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFS 291
SS ++ + + V+ A AV +VYY PR +S+F + A+ +
Sbjct: 253 SSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYY-PRASSSEFCVKALDARAAMRIPWC 311
Query: 292 VGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERV 348
GMRFKM FE EDS F GT+ V V D +WP S WR L++ WDEP +Q +RV
Sbjct: 312 SGMRFKMAFETEDSSRISWFMGTVSAVSVSD-PVRWPNSPWRLLQVAWDEPDLLQYVKRV 370
Query: 349 SPWEIEPFVASAPL--NLAQPAVKSKRPR------SIDIPASASAFWYQGSTQSHDITQV 400
+PW +E P+ + + P K + P+ I +P+ AS + S S + V
Sbjct: 371 NPWLVELVSNVHPIIPSFSPPRKKMRLPQHPDYNTRISVPSFASNPLIRSSPLSSVLDNV 430
Query: 401 VGATEG 406
+G
Sbjct: 431 PVGLQG 436
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ L Y++L +L MF IQ + +V++ D G + G+
Sbjct: 565 KVFMESDDVGRTLDLSVLGSYEELGMKLSDMFGIQ---KSEMLSSVLYRDASGAVKYPGN 621
Query: 613 DQWPEFCKMVKKIFIYSTE 631
+ + EF K +++ I S +
Sbjct: 622 EPFSEFLKTARRLTILSEQ 640
>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 694
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 202/394 (51%), Gaps = 46/394 (11%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP----LFDLPSKILCR 80
R+LW ACAG + VP G VYYFPQGH E L P L +P+ + CR
Sbjct: 21 RQLWLACAGGMCTVPPVGSSVYYFPQGHAEHALG-----LAAAGPGVGGLSRVPALLPCR 75
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
V + +A+ +TDEV+A I L P + + + SF K LT SD +
Sbjct: 76 VAAVRYMADPDTDEVFAGIRLVPLRQDVQDDGAAAAGEDEEHEKPASFAKTLTQSDANNG 135
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 136 GGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYRGTPRRHLLTTGWSAF 195
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRR-----LAHQQSSMPS----SVISSQSMHLGV- 250
V K+LVAGD+ VFLRG+ G+L VG+RR ++ S+P + + M G
Sbjct: 196 VNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWENQQLYTMGPMRGGGN 255
Query: 251 -----------------LATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFS 291
+A AA + F V Y PR S +F + A+ +
Sbjct: 256 VSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWC 315
Query: 292 VGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVS 349
GMRFKM FE EDS F GT+ GV +WP S WR L++ WDEP +Q +RVS
Sbjct: 316 PGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVS 375
Query: 350 PWEIEPFVASAP-LNLAQP-AVKSKRPRSIDIPA 381
PW +E V+S P ++LA + K+PR IPA
Sbjct: 376 PWLVE-LVSSMPAIHLASSFSPPRKKPR---IPA 405
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRDKWAVVFTDDEGDMML 609
+ KV ++ VGR +DL+A+ +++L+ L ++F I+ +LR R V++ G +
Sbjct: 610 QCKVFIESETVGRNLDLSAMSSFEELYGRLSELFCIESAELRSR----VLYRGATGQVKH 665
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
AGD+ + F K +++ I + N+ +
Sbjct: 666 AGDESFSNFIKSARRLTILADAGSDNIGS 694
>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
Length = 708
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 205/395 (51%), Gaps = 52/395 (13%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQ-LEASTNQELTHQEPLFDLPSKILCRVVH 83
R+LW ACAG + VP G VYYFPQGH E L + +L+ +P+ + CRV
Sbjct: 21 RQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGTADLSAAR----VPALVPCRVAA 76
Query: 84 IELLAEQETDEVYAQITLHP----ETDQ--TEPRSPDQCLPEPPKQTVHSFCKILTASDT 137
+ +A+ +TDEV+A+I L P E D E + D+ ++ SF K LT SD
Sbjct: 77 VRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADE------QEKPASFAKTLTQSDA 130
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 131 NNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTGW 190
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH--------QQSSMPSSVISSQS--MH 247
STFV K+LVAGD+ VFLRG++G+L VG+RR PS + M
Sbjct: 191 STFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSPGWDHYAGLMR 250
Query: 248 LGVLATAAHAVKTSTL----------------FIVYYKPR--TSQFIIGLNKYLEAVHHC 289
V AA + F Y PR T +F + A+
Sbjct: 251 GNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEFCVRAAAVRAAMRVQ 310
Query: 290 FSVGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPER 347
+S GMRFKM FE EDS F GT+ GV +WP S WR L++ WDEP +Q +R
Sbjct: 311 WSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKR 370
Query: 348 VSPWEIEPFVASAP-LNLAQPAVKSKRPRSIDIPA 381
VSPW +E V+S P ++LA + K+PR IPA
Sbjct: 371 VSPWLVE-LVSSMPAIHLASFSPPRKKPR---IPA 401
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG-QLRPRDKWAVVFTDDEGDMML 609
+ KV ++ VGR +DL+AL +D+L+ L +MF I+G +LR R V++ G++
Sbjct: 624 QCKVFVESDTVGRNLDLSALSSFDELYRRLSEMFGIEGAELRSR----VLYRCATGEVKH 679
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
AGD+ + +F + +++ I + N+ +
Sbjct: 680 AGDEPFSDFVRSARRLTILTDAGSDNLGS 708
>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
Length = 701
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 200/415 (48%), Gaps = 62/415 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YF QGH E A + PL ILCRVV ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVPPL------ILCRVVSVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP---------KQTVHSFCKILTASD 136
LA+ ETDEV+A+ITL P D L P K+ SF K LT SD
Sbjct: 64 FLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSD 123
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
+ GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 124 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPRRHLLTTG 183
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL------AHQQSSMP------------S 238
WSTFV K+L+AGD+ VFLR E+G+L VG+RR ++ S P S
Sbjct: 184 WSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDES 243
Query: 239 SVISSQSMHL-------------------GVLATAAHAVKTSTLFIVYYKPRTS--QFII 277
+ +S+ M + V + F V Y PR S +F +
Sbjct: 244 TTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVVYYPRASTPEFCV 303
Query: 278 GLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGT--IVGVGDFSEQWPGSKWRSLKI 334
A+ + GMR KM FE EDS F GT V V D +WP S WR L++
Sbjct: 304 KAADVRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVAD-PIRWPNSPWRLLQV 362
Query: 335 QWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR---PRSIDIPASASAF 386
WDEP Q +RVSPW + V++ P P K+ P+ + P + F
Sbjct: 363 AWDEPDLXQNVKRVSPWLVX-LVSNMPTIHLSPFSXWKKIRIPQPFEFPFHGTKF 416
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + +L+ +L +MF I+ RP V + D G + GD
Sbjct: 585 KVFMESEDVGRTLDLSVIGSVQELYRKLAEMFHIEE--RPDLVTHVGYRDANGVIKRIGD 642
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F K K++ I
Sbjct: 643 EPFSDFMKATKRLTI 657
>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
Length = 689
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/403 (38%), Positives = 207/403 (51%), Gaps = 51/403 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E A +L LP +LC V +
Sbjct: 14 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHAGGAADLAAGA--RPLPPLVLCAVTGVR 71
Query: 86 LLAEQETDEVYAQITLHP-ETDQTEPRSPDQCL---------PEPPKQTVHSFCKILTAS 135
LA+ ETDEV+A+I L P + E R PD+ P ++ + SF K LT S
Sbjct: 72 FLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADAREKLSSFAKTLTQS 131
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
D + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 132 DANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 191
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR--------------------------L 229
GWSTFV K+LVAGD+ VFLR E+GEL VG+RR L
Sbjct: 192 GWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSGWNAPGYGALSAFL 251
Query: 230 AHQQSSM---PSSVISSQS-MHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYL 283
++ M P + + + + + AA + F V Y PR T +F++
Sbjct: 252 KDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAASVQ 311
Query: 284 EAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVG--VGDFSEQWPGSKWRSLKIQWDEPA 340
A+ + + GMRFKM FE EDS F GTI V D +WP S WR L++ WDEP
Sbjct: 312 NAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-PIRWPNSPWRLLQVTWDEPD 370
Query: 341 TVQRPERVSPWEIEPFVASAPLNL---AQPAVKSKRPRSIDIP 380
+Q + V+PW +E + P++L + P K + P+ D P
Sbjct: 371 LLQNVKCVNPWLVEIVSSIPPIHLGPFSPPRKKLRMPQHPDFP 413
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ Y++L+ +L MF I+ + + + D G + G+
Sbjct: 598 KVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIE---KAEIMSHLCYRDAAGAVKHTGE 654
Query: 613 DQWPEFCKMVKKIFIYSTEE 632
+ + +F K+ +++ I + E
Sbjct: 655 EPFSDFMKVARRLTIIESTE 674
>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 196/408 (48%), Gaps = 61/408 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E N + P F + CRV ++
Sbjct: 21 QLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPVNFRTCPKVPPF-----VPCRVTAVK 75
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
A+ ETDEVYA++ L P D + SF K LT SD + GGFSV
Sbjct: 76 YRADPETDEVYAKLKLIPLNANDVDYDRDVVGGAETQDKPASFAKTLTQSDANNGGGFSV 135
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R A P LD ++ P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 136 PRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 195
Query: 206 LVAGDAFVFLRGENGELRVGVRRL------------------------------------ 229
LVAGD+ VFLR ENG+L VG+RR
Sbjct: 196 LVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCHIPYGGFSPFFREDD 255
Query: 230 ------AHQQSSMPS-SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLN 280
+ PS S++ + ++ A++ F V Y PR S +F + +
Sbjct: 256 NRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVYYPRASTPEFCVKAS 315
Query: 281 KYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWD 337
A+ + G+RFKM FE EDS F GTI V D WP S WR L++ WD
Sbjct: 316 LVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVAD-PLNWPNSPWRLLQVTWD 374
Query: 338 EPATVQRPERVSPWEIE-----PFVASAPLNLAQPAVKSKRPRSIDIP 380
EP +Q RVSPW +E P + +P + P K + P+ D P
Sbjct: 375 EPDLLQNVRRVSPWLVELVSNMPAIHFSP--FSPPRKKLRLPQQPDFP 420
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ L+ YD+L +L MF I+ + V++ D G + D
Sbjct: 618 KVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIE---KSEMLSHVLYRDSTGAVKRISD 674
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMAT 638
+ + +F + K++ I N+
Sbjct: 675 ESFSDFTRTAKRLTILMDSGSNNVGV 700
>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
Length = 653
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 206/410 (50%), Gaps = 54/410 (13%)
Query: 15 QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
+GG G L +LW ACAG +V +P +V+YFPQGH E A + + +P
Sbjct: 9 KGGTEKG-LDPQLWHACAGGMVRMPPMNSKVFYFPQGHAEN--AYDCVDFGN----LPIP 61
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFC 129
+LCRV+ I+ +A+ E+DEV+A++ L P D D E + SF
Sbjct: 62 PMVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFA 121
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K LT SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PR
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPR 181
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAH------QQSSMPSSVISS 243
RHLLTTGWS FV K+LVAGD+ VF+R ENG+L VG+RR + S + I
Sbjct: 182 RHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGG 241
Query: 244 QSMHLGVL---------------------ATAAHAVKTSTL------FIVYYKPR--TSQ 274
+ +L TA ++ +TL F V Y PR TS+
Sbjct: 242 SCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSE 301
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 302 FCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSD-PIRWPNSPWRL 360
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPLNL---AQPAVKSKRPRSID 378
L++ WDEP +Q +RV+PW +E P+ L + P K + P+ D
Sbjct: 361 LQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPD 410
>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 739
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 156/216 (72%), Gaps = 5/216 (2%)
Query: 170 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL 229
AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+RR
Sbjct: 2 AKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRA 61
Query: 230 AHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH 287
Q+ MPSSV+SS SMH+G+LA AAHA T++ F ++Y PR S+F+I L KY++AV+
Sbjct: 62 NRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVY 121
Query: 288 HC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRP 345
H SVGMRF+M FE E+S RR+ GTI G+ D S +WP S WRS+K+ WDE +R
Sbjct: 122 HTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQ 181
Query: 346 ERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPA 381
RVS WEIEP + + P+ + ++ KRP +P+
Sbjct: 182 PRVSLWEIEP-LTTFPMYPSPFPLRLKRPWPTGLPS 216
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G GR++D+T Y +L EL ++F ++GQL R W +VF D E D+
Sbjct: 607 TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDV 665
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLD 657
+L GDD W EF V I I S +EV+ M + SS S D
Sbjct: 666 LLVGDDPWQEFVSTVSCIKILSPQEVQQMGKQGLELLSSAPARRLGSSCD 715
>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
gi|238015272|gb|ACR38671.1| unknown [Zea mays]
Length = 534
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 156/216 (72%), Gaps = 5/216 (2%)
Query: 170 AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL 229
AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+RR
Sbjct: 2 AKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRA 61
Query: 230 AHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVH 287
Q+ MPSSV+SS SMH+G+LA AAHA T++ F ++Y PR S+F+I L KY++AV+
Sbjct: 62 NRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVY 121
Query: 288 HC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRP 345
H SVGMRF+M FE E+S RR+ GTI G+ D S +WP S WRS+K+ WDE +R
Sbjct: 122 HTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQ 181
Query: 346 ERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPA 381
RVS WEIEP + + P+ + ++ KRP +P+
Sbjct: 182 PRVSLWEIEP-LTTFPMYPSPFPLRLKRPWPTGLPS 216
>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 608
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 203/405 (50%), Gaps = 52/405 (12%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E E + +P I CR+
Sbjct: 8 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKV--EYFGKNHQTRVPPLIPCRLS 65
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL--------PEPPKQTVHSFCKILTA 134
++ +A+ +TDEVY ++ L P + S D C E ++ SF K LT
Sbjct: 66 AMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEKPPTSFAKTLTQ 125
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 126 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLT 185
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------- 228
TGWS FV KRLVAGD+ VFLR ENG+L VG+RR
Sbjct: 186 TGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWNNPLFGGGGGF 245
Query: 229 LAHQQSSMPSSVISSQSMHL-------GVLATAAHAVKTSTLFIVYYKPRTS--QFIIGL 279
L +SS S S + V+ AV +VYY PR S +F +
Sbjct: 246 LCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYY-PRASSPEFCVKA 304
Query: 280 NKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQW 336
+ A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++ W
Sbjct: 305 SVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVAD-PIRWPDSPWRLLQVVW 363
Query: 337 DEPATVQRPERVSPWEIEPFVASAP-LNLAQPAVKSKRPRSIDIP 380
DEP +Q + V+PW +E V++ P NL+ + K+ R + P
Sbjct: 364 DEPDLLQNVKCVNPWLVE-LVSNMPTFNLSAYSPPRKKQRFLQDP 407
>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
Length = 705
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 202/418 (48%), Gaps = 65/418 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YFPQGH E A + PL ILCRV ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRVASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFL------------RGENGELRVGVRRLAHQQSSMPS--------S 239
FV K+L+AGD+ VFL R + G L ++ + P
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDE 243
Query: 240 VISSQSMHL-------GVLATAAHA----------------VKTSTLFIVYYKPRTS--Q 274
+ +S+ M + G A A+A F V Y PR S +
Sbjct: 244 ITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRASTPE 303
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRL 362
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+ D P + F
Sbjct: 363 LQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKLRIPQPFDFPFDGTKF 419
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 653
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 654 EPFSDFMRATKRLTI 668
>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
Length = 716
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 192/391 (49%), Gaps = 67/391 (17%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E + + P +P+ +LCRV +
Sbjct: 14 QLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQGPVDL------PAGRVPALVLCRVAAVR 67
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH--------SFCKILTASDT 137
+A+ +TDEV+A+I L P P P SF K LT SD
Sbjct: 68 FMADPDTDEVFAKIRLAP----VRPNEPGYADDAIGAAAASGAQEDKPASFAKTLTQSDA 123
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 124 NNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGW 183
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ------------- 244
STFV K+LVAGD+ VF+R ENG+L VG+RR P +
Sbjct: 184 STFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHHHQQPPPPQGGGYAG 243
Query: 245 -SMHLG---------------------------VLATAAHAVKTSTLFIVYYKPR--TSQ 274
SM L V+ A AV +VYY PR T +
Sbjct: 244 FSMFLRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQPFEVVYY-PRASTPE 302
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 303 FCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVAD-PIRWPNSPWRL 361
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
L++ WDEP +Q +RVSPW +E V++ P+
Sbjct: 362 LQVAWDEPDLLQNVKRVSPWLVE-LVSNMPV 391
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 536 KETQNKQ-GSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI-QGQLRPR 593
+E N+ GS KV MQ VGR +DL+A+ Y++L+ L MF + + +L
Sbjct: 615 EECNNRAAGSEDDLLGHCKVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDKAELTSH 674
Query: 594 DKWAVVFTDD-EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
V + DD G + GD+ + EF K +++ I + E ++A
Sbjct: 675 ----VFYRDDASGALKHPGDEPFSEFTKTARRLTILTDESSDSLA 715
>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
Length = 705
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 202/418 (48%), Gaps = 65/418 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YFPQGH E A + PL ILCRV ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRVASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFL------------RGENGELRVGVRRLAHQQSSMPS--------S 239
FV K+L+AGD+ VFL R + G L ++ + P
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDE 243
Query: 240 VISSQSMHL-------GVLATAAHA----------------VKTSTLFIVYYKPRTS--Q 274
+ +S+ M + G A A+A F V Y PR S +
Sbjct: 244 ITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRASTPE 303
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRL 362
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+ D P + F
Sbjct: 363 LQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKLRIPQPFDFPFDGTKF 419
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 653
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 654 EPFSDFMRATKRLTI 668
>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 703
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 205/407 (50%), Gaps = 52/407 (12%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG L+++P +V YFPQGH E A N + + +PS I CRV
Sbjct: 15 LDSQLWHACAGGLIQLPTINSKVVYFPQGHTEH--AQGNVDFGNAR----IPSIIPCRVS 68
Query: 83 HIELLAEQETDEVYAQITLHP------ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASD 136
I +A+ ETDEV+A+I L P D + L K T SF K LT SD
Sbjct: 69 GIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQDKPT--SFAKTLTQSD 126
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
+ GGFSV R A P LD ++ P Q + AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 127 ANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIWKFRHIYRGTPRRHLLTTG 186
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLA-------------HQQSSMPSSVISS 243
WS+FV K+LVAGD+ VFLR E G+L +GVRR + +S S V S
Sbjct: 187 WSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGIDYSPGWNPTNSGSSLVGYS 246
Query: 244 QSM-----HLG----------------VLATAAHAVKTSTLFIVYYK-PRTSQFIIGLNK 281
M LG V+ A A + IVYY T +F++ +
Sbjct: 247 DYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQSFEIVYYPCAGTPEFVVKASS 306
Query: 282 YLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEP 339
A+ + MRFKM FE EDS F GT+ + +WP S WR L++ WDEP
Sbjct: 307 LRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQAADPIRWPDSPWRMLQVTWDEP 366
Query: 340 ATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASASAF 386
+Q + V+PW +E V ++++ + K+PR + A +S F
Sbjct: 367 DLLQNVKSVNPWLVEVVVNMPAIHVSPFSPPRKKPR-FPLQADSSGF 412
>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
Length = 704
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 202/418 (48%), Gaps = 65/418 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YFPQGH E A + PL ILCR+ ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRLASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFL------------RGENGELRVGVRRLAHQQSSMPS--------S 239
FV K+L+AGD+ VFL R + G L ++ + P
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDE 243
Query: 240 VISSQSMHL-------GVLATAAHA----------------VKTSTLFIVYYKPRTS--Q 274
+ +S+ M + G A A+A F V Y PR S +
Sbjct: 244 ITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRASTPE 303
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRL 362
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+ D P + F
Sbjct: 363 LQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKLRIPQPFDFPFDGTKF 419
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 595 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 652
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 653 EPFSDFMRATKRLTI 667
>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 199/416 (47%), Gaps = 66/416 (15%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP--SKILCR 80
L +LW ACAG +V++P +V+YFPQGH E + +LP S LCR
Sbjct: 19 LDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVD--------FRNLPRVSHNLCR 70
Query: 81 VVHIELLAEQETDEVYAQITLHP------ETDQTEPRSPDQCLPEPPKQTVHSFCKILTA 134
V I+ +A+ ETDEV+A+I L P + D E SF K LT
Sbjct: 71 VSDIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVSFAKTLTQ 130
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD T P Q L AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLT 190
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI------------- 241
TGWS FV K+L+AGD+ VF R ENG+L VGVRR P S+
Sbjct: 191 TGWSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSAVPSGG 250
Query: 242 ------------------------SSQSMHLGVLATAAHAVKTSTL------FIVYYKPR 271
S++S+ A ++ TL F V Y PR
Sbjct: 251 FGAFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEVVYYPR 310
Query: 272 --TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGV-GDFSEQWPGS 327
T +F + + A+ + GMRFKM FE EDS F GT+ V S WP S
Sbjct: 311 ANTPEFCVKASLVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAADSLWWPHS 370
Query: 328 KWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLN---LAQPAVKSKRPRSIDIP 380
WR L++ WDEP +Q +RVSPW +E A ++ + P K + P+ +D P
Sbjct: 371 PWRLLQVTWDEPDLLQNVKRVSPWLVELASNMAAIHFPPFSSPRKKLRLPQHLDFP 426
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 479 IDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKE- 537
I L N A+P+ TG S +G+ ++F L +RG+ + S E
Sbjct: 552 ISLSCPGNAASPV-------LTGNSSSEGNLDKMANFSDGSVSTLH--RRGLPECSSCEE 602
Query: 538 ----TQNKQGSAASTRT-RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
Q S S T KV M VGR +DL+ L Y++L+ +L MF LR
Sbjct: 603 LQWNKDKHQKSEPSLETGHCKVFMDSEDVGRTLDLSLLGSYEELYRKLANMF----GLRN 658
Query: 593 RDKWA-VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+K++ V++ D G G++ + +F K +++ I + N+
Sbjct: 659 SEKFSNVLYRDINGITKHIGEEPFSDFFKTARRLTIVTDSSSGNVG 704
>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 202/418 (48%), Gaps = 65/418 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YFPQGH E A + PL ILCR+ ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRLASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFL------------RGENGELRVGVRRLAHQQSSMPS--------S 239
FV K+L+AGD+ VFL R + G L ++ + P
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDE 243
Query: 240 VISSQSMHL-------GVLATAAHA----------------VKTSTLFIVYYKPRTS--Q 274
+ +S+ M + G A A+A F V Y PR S +
Sbjct: 244 ITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRASTPE 303
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRL 362
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+ D P + F
Sbjct: 363 LQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKLRIPQPFDFPFDGTKF 419
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 654
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 655 EPFSDFMRATKRLTI 669
>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
Length = 705
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 153/418 (36%), Positives = 202/418 (48%), Gaps = 65/418 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YFPQGH E A + PL ILCR+ ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRLASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFL------------RGENGELRVGVRRLAHQQSSMPS--------S 239
FV K+L+AGD+ VFL R + G L ++ + P
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDE 243
Query: 240 VISSQSMHL-------GVLATAAHA----------------VKTSTLFIVYYKPRTS--Q 274
+ +S+ M + G A A+A F V Y PR S +
Sbjct: 244 ITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRASTPE 303
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRL 362
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+ D P + F
Sbjct: 363 LQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKLRIPQPFDFPFDGTKF 419
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 653
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 654 EPFSDFMRATKRLTI 668
>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
Length = 707
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 201/391 (51%), Gaps = 42/391 (10%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQ-LEASTNQELTHQEPLFDLPSKILCRVVH 83
R+LW ACAG + VP G V YFPQGH E L +L+ +P+ + CRV
Sbjct: 21 RQLWLACAGSMCTVPLVGASVCYFPQGHAEHALGLDGAADLSAAR----VPALVPCRVTA 76
Query: 84 IELLAEQETDEVYAQITLHP--ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ +A+ +TDEV+A+I L P + D ++ SF K LT SD + G
Sbjct: 77 VRYMADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQEKPASFAKTLTQSDANNGG 136
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 137 GFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYRGTPRRHLLTTGWSTFV 196
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRR----------LAHQQSSMPSSVISSQSMHLGVL 251
K+L+AGD+ VFLRG++G+L VG+RR ++ P + + V
Sbjct: 197 NQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAPTPGWHHYAGLIRGNVS 256
Query: 252 ATAAHAVKTSTL----------------FIVYYKPR--TSQFIIGLNKYLEAVHHCFSVG 293
AA + F V Y PR T +F + A+ +S G
Sbjct: 257 PCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVRAAAVRAAMRVQWSPG 316
Query: 294 MRFKMRFEGEDSPE-RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPW 351
MRFKM FE EDS F GT+ GV +WP S WR L++ WDEP +Q +RVSPW
Sbjct: 317 MRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPW 376
Query: 352 EIEPFVASAP-LNLAQPAVKSKRPRSIDIPA 381
+E V+S P ++LA + K+PR IPA
Sbjct: 377 LVE-LVSSMPAIHLASFSPPRKKPR---IPA 403
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG-QLRPRDKWAVVFTDDEGDMML 609
+ KV ++ VGR +DL+AL +D+L+ L +MF ++G ++R R V++ G++
Sbjct: 623 QCKVFVESDTVGRNLDLSALGSFDELYGRLSEMFGVEGAEMRSR----VLYRGATGEVRH 678
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
AGD+ + +F K ++I I + N+ +
Sbjct: 679 AGDEPFSDFVKSARRITILTDAGSDNLGS 707
>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
[Vitis vinifera]
Length = 593
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 196/364 (53%), Gaps = 42/364 (11%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL-FDLPSKILCRVVHIE 85
+W+ACAG V +P RVYYFPQGH+EQ AS+ L+ PL F PS +LCRVV +
Sbjct: 16 IWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLS---PLVFSKPS-VLCRVVAVW 69
Query: 86 LLAEQETDEVYAQITLHP-----ETDQTEPR---SPDQCLPEPPKQTVHSFCKILTASDT 137
LA+Q+TDEV+A+I L P E+ E R D + + V SF KILT+SD
Sbjct: 70 FLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDA 129
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A PPL+ P Q L DL G +W F+HI+RG PRRHLLTTGW
Sbjct: 130 NNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGW 189
Query: 198 STFVTSKRLVAGDAFVFL-RGENGELRVGVRRLAHQ---------QSSMPSSVISSQSMH 247
S FV K+LVAGD+ VF+ R N EL +GVRR A +S++ +V + +
Sbjct: 190 SKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEVGS 249
Query: 248 LGVLATAAHAVKTSTL-------------FIVYYKPR--TSQFIIGLNKYLEAVHHCFSV 292
+ + ++ + F V Y PR +S F++ EA+ ++
Sbjct: 250 IEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTG 309
Query: 293 GMRFKMRFEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSP 350
GMR KM E EDS + F GT+ W GS WR L++ WDEP +Q RVSP
Sbjct: 310 GMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQVTWDEPEVLQNVMRVSP 369
Query: 351 WEIE 354
W++E
Sbjct: 370 WQVE 373
>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
Length = 698
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 186/372 (50%), Gaps = 43/372 (11%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E + + +L P +P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
LA+ +TDEV A++ L P EP D P + SF K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAP-VRPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 206 LVAGDAFVFLR-GENGELRVGVRR-----------LAHQQSSMPSSVISSQSMHLGVL-- 251
LVAGD+ VF+R G G+L VG+RR H Q + L
Sbjct: 199 LVAGDSIVFMRTGGTGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRG 258
Query: 252 ----ATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYL-------------EAVHHC--FSV 292
+ +PR + + YL + HH +
Sbjct: 259 EEDDEGQGQGAGAAGGGRRGRQPRGERAAVRGGLYLPKANTQSCASRRGRSAHHVTQWCA 318
Query: 293 GMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVS 349
GMRFKM FE EDS F GT+ V V D +WP S WR L++ WDEP +Q +RVS
Sbjct: 319 GMRFKMAFETEDSSRISWFMGTVAAVQVAD-PIRWPNSPWRLLQVAWDEPDLLQNVKRVS 377
Query: 350 PWEIEPFVASAP 361
PW +E V+S P
Sbjct: 378 PWLVE-LVSSTP 388
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDD-EGDMMLAG 611
KV MQ VGR +DL+A+ Y++L+ L MF + R V + D G + AG
Sbjct: 621 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVD---RAELTSHVFYRDGASGALKHAG 677
Query: 612 DDQWPEFCKMVKKIFI 627
D+ + EF K +++ I
Sbjct: 678 DEPFSEFTKTARRLTI 693
>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 201/418 (48%), Gaps = 65/418 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YFPQGH E A + PL ILCR+ ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRLASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFL------------RGENGELRVGVRRLAHQQSSMPS--------S 239
FV K+L+AGD+ VFL R + G L ++ + P
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDE 243
Query: 240 VISSQSMHL-------GVLATAAHA----------------VKTSTLFIVYYKPRTS--Q 274
+ +S+ M + G A A+A F V Y PR S +
Sbjct: 244 ITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRASTPE 303
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRL 362
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPRSIDIPASASAF 386
L++ WDEP +Q +R SPW +E V++ P L+ P K + P+ D P + F
Sbjct: 363 LQVAWDEPDLLQNVKRASPWLVE-LVSNMPAIHLSPFSPRKKLRIPQPFDFPFDGTKF 419
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 654
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 655 EPFSDFMRATKRLTI 669
>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
Length = 603
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 191/397 (48%), Gaps = 53/397 (13%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL-CRVVH 83
R +W+ACAG V++P RVYYFPQGH+EQ S++ + L ++ C++
Sbjct: 16 RRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPVIPCQISA 75
Query: 84 IELLAEQETDEVYAQITLHPETDQTEPRSP--------------DQCLPEPPKQTVHSFC 129
++ LA+ TDEVY ++ L P D P P D + + + +F
Sbjct: 76 VQFLADPVTDEVYTKLLLFP-IDSFNPSVPVLEHSGNLEQHHGYDY---DDDEDKIVAFA 131
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
KILT SD + GGFSV R A PPL+ P Q L D+HG W F+HI+RG PR
Sbjct: 132 KILTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYRGTPR 191
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL- 248
RHLLTTGWS FV K+L+AGD+ VF+R G++ +GVRR + + +
Sbjct: 192 RHLLTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCARWREQIACF 251
Query: 249 ---------------------------GVLATAAHAVKTSTLFIVYYKPRT---SQFIIG 278
V+ A + + +VYY PR S F++
Sbjct: 252 GGGGGDVKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYY-PRAGWYSDFVVR 310
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVG-DFSEQWPGSKWRSLKIQW 336
+ A+ C+S GMR KM E EDS F GTI W GS WR L++ W
Sbjct: 311 TDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPWRMLQVAW 370
Query: 337 DEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
DEP +Q +RVSPW++E S PL+ A P K R
Sbjct: 371 DEPEVLQNAKRVSPWQVEYVSPSPPLHGAFPPAKKFR 407
>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
Length = 622
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 190/359 (52%), Gaps = 39/359 (10%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIEL 86
+W+A AG V++P G RVYYFPQGH E ++ ++ P F ILCRV+ +
Sbjct: 15 VWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTSPAVMSPGMPAF-----ILCRVLSVRF 69
Query: 87 LAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
LAE +TDEVYA+I LHP E D+ R + + + SF KILT SD + GG
Sbjct: 70 LAESDTDEVYARIFLHPISQSEVDEVTMREEEVV-----EDEIVSFVKILTPSDANNGGG 124
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R A P LD P Q L+ +D+ G W F+HI+RG PRRHLLTTGWS FV
Sbjct: 125 FSVPRFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGWSKFVN 184
Query: 203 SKRLVAGDAFVFL-RGENGELRVGVRRLAHQQSS---MPSSVISSQSMHLGVLATAAHAV 258
SK+LVAGD+ VF+ R N +L VGVRR + SS + + ++ G + +
Sbjct: 185 SKQLVAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINNGGSPDVSWGI 244
Query: 259 KTSTL-----------------FIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMR 299
+ + F V PR + F++ + A++ ++VGMR KM
Sbjct: 245 RKGRMTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVKAQEVQMALNMPWTVGMRVKMA 304
Query: 300 FEGEDSPERR-FTGTIVGV-GDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF 356
E EDS + GT+ V + S W GS WR L+I W+EP Q RV+PW++E F
Sbjct: 305 VEAEDSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRVNPWQVECF 363
>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
Length = 699
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 190/397 (47%), Gaps = 58/397 (14%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G G G + +LW ACAG + VP G VYYFPQGH EQ A+ + PL
Sbjct: 13 GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSARVPPL------ 66
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHP------------ETDQTEPRSPDQCLPEPPKQT 124
+ CRVV + +A+ E+DEV+A+I L P R + P P
Sbjct: 67 VPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRP---- 122
Query: 125 VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIF 184
SF K LT SD + G R A P LD + P Q + AKD+HG EW F+HI+
Sbjct: 123 -TSFAKTLTQSDANNGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIY 181
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS-----S 239
RG PRRHLLTTGWS FV K+L AGD+ VF+R E G + VG+RR S+ S
Sbjct: 182 RGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLS 241
Query: 240 VISSQSMHLGVL------------------------ATAAHAVKTSTLFIVYYKPR--TS 273
I + G++ TAA T F V Y PR T
Sbjct: 242 SIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTP 301
Query: 274 QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGV-GDFSEQWPGSKWRS 331
+F + A+ + GMRFKM FE EDS F GT+ GV +WP S WR
Sbjct: 302 EFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRL 361
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA 368
L++ WDEP +Q +RV PW +E V+S P NL P+
Sbjct: 362 LQVTWDEPELLQNVKRVCPWLVE-LVSSMP-NLHLPS 396
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI-QGQLRPRDKWAVVFTDDEGDMML 609
+ KV ++ VGR++DL+AL +++L+ L MF I +LR +V+ G++
Sbjct: 615 QCKVFVESETVGRSLDLSALSSFEELYACLSDMFSIGSDELRSH----LVYRSPAGEVKH 670
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
AGD+ + F K +K+ I + N+
Sbjct: 671 AGDEPFCAFVKSARKLRILTDAGSDNLG 698
>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 589
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 203/409 (49%), Gaps = 63/409 (15%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E +Q +P I CR+
Sbjct: 8 LDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKRVDFPKNQT---RVPPLIPCRLS 64
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCL--------------PEPPKQTVHSF 128
++ +A+ +TDEVY ++ L P + S D C +PP SF
Sbjct: 65 AMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQEKPPT----SF 120
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
K LT SD + GGFSV R A P LD + P Q + AKD+ G W+F+HI+RG P
Sbjct: 121 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIYRGTP 180
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------- 228
RRHLLTTGWS FV KRLVAGD+ VFLR ENG+L VG+RR
Sbjct: 181 RRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGWNNPL 240
Query: 229 -----LAHQQSSMPSSVISSQSMHLG------VLATAAHAVKTSTLFIVYYKPRTS--QF 275
L +S++ S M +G V+ AV +VYY PR S +F
Sbjct: 241 FGGGFLCGSESNLMSG--GDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYY-PRASSPEF 297
Query: 276 IIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSL 332
+ + A+ + GMRFKM FE EDS F GTI V V D WP S WR L
Sbjct: 298 CVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVAD-PILWPDSPWRLL 356
Query: 333 KIQWDEPATVQRPERVSPWEIEPFVASAP-LNLAQPAVKSKRPRSIDIP 380
++ WDEP +Q + V+PW +E V++ P NL+ + K+ R + P
Sbjct: 357 QVVWDEPDLLQNVKCVNPWLVE-LVSNMPTFNLSAYSPPRKKQRFLQDP 404
>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
Length = 706
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 192/399 (48%), Gaps = 55/399 (13%)
Query: 15 QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
+GG L +LW ACAG +V++P +VYYFPQGH E + +P
Sbjct: 14 RGGDDGRCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQCGGGDFPPGAGAGRGIP 73
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH-------- 126
+ +LCRV + +A+ +TDEV+A+I L P +P
Sbjct: 74 ALVLCRVAGVHFMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAEKP 133
Query: 127 -SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
SF K LT SD + GGFSV R A P LD + P Q + AKD+HG W+F+HI+R
Sbjct: 134 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYR 193
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR----------LAHQQSS 235
G PRRHLLTTGWS+FV K+LVAGD+ VF+R ENG+L VG+RR L
Sbjct: 194 GTPRRHLLTTGWSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPELLPPPPP 253
Query: 236 MPSSVISSQSMHLG----------------------------VLATAAHAVKTSTLFIVY 267
P + SM L V A A +VY
Sbjct: 254 PPGTNYGGFSMFLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLAASGQPFDVVY 313
Query: 268 YKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSE 322
Y PR T +F + A+ + GMRFKM FE EDS F GT+ V V D
Sbjct: 314 Y-PRASTPEFCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVQVSD-PI 371
Query: 323 QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
+WP S WR L++ WDEP +Q +RVSPW +E V++ P
Sbjct: 372 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMP 409
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
K+ MQ VGR +DL A+ YD+L+ L MF I+ R V + D G + GD
Sbjct: 628 KIFMQSEDVGRTLDLAAVGSYDELYRRLADMFGIEKAELMRQ---VFYRDAAGALKHTGD 684
Query: 613 DQWPEFCKMVKKIFIYS 629
+ + +F K +++ I +
Sbjct: 685 EPFSDFTKTARRLTILT 701
>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
Length = 593
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 233/520 (44%), Gaps = 77/520 (14%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW+A AG V++P RVYYFPQGH++Q +T+ L P ILC V
Sbjct: 16 LNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQ---ATSLPNNLSPLLLSRP-YILCSVS 71
Query: 83 HIELLAEQETDEVYAQITLHPETDQTE--PRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
+ LA+ +TDEV+A++ L P D T PR P + + + SF KILT SD +
Sbjct: 72 AVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIP--VIEADDGERISSFAKILTPSDANNG 129
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R A PPLD ++ P Q L D+HG W F+HI+RG PRRHLLTTGWS F
Sbjct: 130 GGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSKF 189
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL------------ 248
V +K+LVAGD+ VF++ G + +G+RR + SS + S L
Sbjct: 190 VNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGVRSRVD 249
Query: 249 ----------------GVLATAAHAVKTSTL-----FIVYYKPRT--SQFIIGLNKYLEA 285
G L+ A A F V Y PR S F++ A
Sbjct: 250 DEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKAEVVDAA 309
Query: 286 VHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATV 342
+ + GMR KM E +DS F G + V V D W GS WR L I WDEP +
Sbjct: 310 MSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGA-WRGSPWRMLHITWDEPEVL 368
Query: 343 QRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVVG 402
Q + VSPW++E + L+ P +K R S G IT
Sbjct: 369 QTSKWVSPWQVELLSTTPSLHTPFPPLKRTR--------GVSGVLTDGDGDPFSITGFTN 420
Query: 403 ATEGQSSESQV--------VRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPG 454
+T GQ ++ + ++ R + +N D+ R+ S + S+ PG
Sbjct: 421 STTGQLNQPLLSYSTFPAGMQGARHDLFSVSSFSNFPGDNFRLCMGNS----FGSNTVPG 476
Query: 455 NTVIHEEVERGK--------KSEASLGCWLFGIDLKHNSN 486
++ G +S++SL FG D N N
Sbjct: 477 LKSFSTDLNVGSSQSGDFSPESQSSLPS--FGTDFVRNYN 514
>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
Length = 417
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 177/338 (52%), Gaps = 34/338 (10%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAGP+V++P +V+YFPQGH E A+ + P+ P+ +LCRV ++
Sbjct: 11 QLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAV--DFPSSPPV---PALVLCRVASLK 65
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
+A+ ETDEVYA+I L P + + SF K LT SD + GGFSV
Sbjct: 66 FMADTETDEVYAKILLMPLPNTELDLEHVAVFGSDNAEKPASFAKTLTQSDANNGGGFSV 125
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R A PPLD T P Q + A D+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 126 PRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 185
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMP---SSVIS------SQSMHL-------- 248
LVAGD+ VFLR ENG L VG+RR + P S +S S+ M +
Sbjct: 186 LVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESKMMMMNRNGDWRG 245
Query: 249 -------GVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMR 299
VL A A +VYY PR T +F + + A+ + GMRFKM
Sbjct: 246 KGKLKAEAVLQAATLAASGQPFEVVYY-PRASTPEFCVKASSVKAAMRVPWCCGMRFKMA 304
Query: 300 FEGEDSPE-RRFTGTIVGVGDFSE-QWPGSKWRSLKIQ 335
FE EDS F GT+ V +WP S WR +++
Sbjct: 305 FETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLFQLE 342
>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 690
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 186/374 (49%), Gaps = 55/374 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E + + +L P +P+ +LCRV +
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADL----PAGRVPALVLCRVDAVR 79
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
LA+ +TDEV A++ L P EP D P + SF K LT SD + GGFSV
Sbjct: 80 FLADPDTDEVLARVRLAP-VRPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSV 138
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS FV KR
Sbjct: 139 PRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKR 198
Query: 206 LVAGDAFVFLRGENGELRVGVRR-----------LAHQQSSMPSSVI------------- 241
LVAGD+ VF+R NG+L VG+RR H Q
Sbjct: 199 LVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGE 258
Query: 242 ---SSQSMHLGVLATAAHAVKTSTL------FIVYYKPR--TSQFIIGLNKYLEAVHHCF 290
++ + VL V+ + L F V Y PR T +F + A+ +
Sbjct: 259 EDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQW 318
Query: 291 SVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPER 347
GMRFKM FE EDS F GT+ V V D +WP S WR L Q +R
Sbjct: 319 CAGMRFKMAFETEDSSRISWFMGTVAAVQVAD-PIRWPNSPWRLL----------QNVKR 367
Query: 348 VSPWEIEPFVASAP 361
VSPW +E V+S P
Sbjct: 368 VSPWLVE-LVSSTP 380
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDD-EGDMMLAG 611
KV MQ VGR +DL+A+ Y++L+ L MF + R V + D G + AG
Sbjct: 613 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVD---RAELTSHVFYRDGASGALKHAG 669
Query: 612 DDQWPEFCKMVKKIFI 627
D+ + EF K +++ I
Sbjct: 670 DEPFSEFTKTARRLTI 685
>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
Length = 524
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 187/341 (54%), Gaps = 30/341 (8%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTN-QELTHQE---PLFDLPSKILCR 80
+++W+ CAG V++P+ VYYFP GH+E + S N L+H + P ILC
Sbjct: 10 QKIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPNPNTLSHLDRSRPF------ILCT 63
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQT--EPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
V ++LLA+ TDEV+ ++ L P T++ EP S + + + V S+ K LT SD +
Sbjct: 64 VSAVDLLADLCTDEVFVKLLLTPVTNKGVHEPHSLEVREDKDDDKKVVSYSKTLTPSDAN 123
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
G FSV + A PPLD+ P QEL+ D+HG W+F+H++RG P RHLLTT WS
Sbjct: 124 NGGAFSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLTTDWS 183
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAV 258
FV KRLV GD+ +F++ +G + VGVRR Q ++ I+ +S A
Sbjct: 184 EFVDKKRLVGGDSLIFMKDSDGNISVGVRR---QTKFGGAAKITEKS-----FTEAVELA 235
Query: 259 KTSTLFIVYYKPRT---SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER--RFTGT 313
+ F V Y P F++ +A++ +S+G+R ++ + DS +R +F GT
Sbjct: 236 DKNLAFEVVYYPTAKGWCNFVVDAKVVEDAMNISWSLGVRIELSSKNYDSSKRCSKFEGT 295
Query: 314 IVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
I + P WR L+++WDEP Q PERVSPWE+E
Sbjct: 296 ISALSA-----PNCPWRMLEVKWDEPKVSQVPERVSPWEVE 331
>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
Length = 497
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 187/310 (60%), Gaps = 28/310 (9%)
Query: 334 IQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPR------SIDIPASASAF 386
+ WDEPA++ RP +VSPWEIEPFV S N+ + +K+KRPR ++D+ +AS
Sbjct: 181 VHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNL 238
Query: 387 WYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSG 446
W TQ H+ Q T SS Q R + S +NN+ + + VA S L
Sbjct: 239 WSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAKKSDWLNNSYSVSN--VAKDSTL-- 293
Query: 447 YASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVK 506
N + VE+ KK E + LFGIDL +S+ A P + P + K
Sbjct: 294 --------NDQMVSPVEQ-KKPETTANYRLFGIDL-MSSSLAVPEEKTA--PMRPINISK 341
Query: 507 GSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVD 566
+ + SD + ++ +E K+ A+ S KE Q+KQ S STR+RTKVQMQG+ VGRAVD
Sbjct: 342 PTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSS--STRSRTKVQMQGVPVGRAVD 399
Query: 567 LTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIF 626
L ALKGY++L D++EK+F+I+G+LR R++W +VFTDDEGDMML GDD WPEFC MVK+IF
Sbjct: 400 LNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIF 459
Query: 627 IYSTEEVKNM 636
I+S EEVK M
Sbjct: 460 IWSKEEVKKM 469
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 116/152 (76%), Gaps = 5/152 (3%)
Query: 8 FGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQ-ELTH 66
F ++++GG LY ELWK CAGPLV+VP+ ERVYYFPQGH+EQLEAST Q +L
Sbjct: 32 FNQLMANRGGEY---LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNT 88
Query: 67 QEPLFDLPSKILCRVVHIELLAEQETDEVYAQITLHPE-TDQTEPRSPDQCLPEPPKQTV 125
+PLF LP KILC V+++ L AE++TDEVYAQITL P T+ EP SPD PE + V
Sbjct: 89 MKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKV 148
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPL 157
HSF K+LTASDTSTHGGFSVLRKHATECLPPL
Sbjct: 149 HSFSKVLTASDTSTHGGFSVLRKHATECLPPL 180
>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
Length = 671
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 194/385 (50%), Gaps = 50/385 (12%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIEL 86
W C G +V++P +V+YFPQG+ E TN + T L +P+ ILCRV ++
Sbjct: 13 FWHVCTGSMVQIPPVNSKVFYFPQGYAEH--TFTNVDFTV---LARIPAMILCRVDAVKF 67
Query: 87 LAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVL 146
LA+ ETDEVYA+I L P D + D + E K F K LT SD + GGFSV
Sbjct: 68 LADTETDEVYAKIRLIPVEDFED----DSVVEETEKPAF--FAKTLTQSDANNGGGFSVP 121
Query: 147 RKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 206
R A P LD T P Q + AKD+HG W F+HI+RG PRRHLLT+GWS FV K+L
Sbjct: 122 RYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSGWSAFVNKKKL 181
Query: 207 VAGDAFVFLRGENGELRVGVRRLAH--------------------------QQSSMPSSV 240
VAG + VF++ EN EL VG+RR+ + SS ++
Sbjct: 182 VAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFVTEDENSSTNGNL 241
Query: 241 ISSQSMHLG--------VLATAAHAVKTSTLFIVYYK-PRTSQFIIGLNKYLEAVHHCFS 291
IS V+ + A IVYY T ++ + + A+ +
Sbjct: 242 ISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVKASSVRAAMSVQWC 301
Query: 292 VGMRFKMRFEGED-SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVS 349
GMRFKM FE ED S F G+I V +WP S WR L++ WDEP +Q + V+
Sbjct: 302 SGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTWDEPDLLQNVKSVN 361
Query: 350 PWEIEPFVASAP-LNLAQPAVKSKR 373
PW +E V++ P +NL+ + KR
Sbjct: 362 PWLVE-LVSNMPDINLSHNSPPRKR 385
>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
Length = 370
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 179/350 (51%), Gaps = 42/350 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E +L LPS +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR---ALPSLVLCSVTGVR 69
Query: 86 LLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPP--KQTVHSFCKILTASDTSTHGG 142
LA+ ETDEV+A+I L P + E R PD+ +P ++ + SF K LT SD + GG
Sbjct: 70 FLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADAREKLSSFAKTLTQSDANNGGG 129
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 130 FSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 189
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLA---------- 252
K+LVAGD+ VFLR E+GEL VG+RR+ + + G L+
Sbjct: 190 QKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFLKDEEGKM 249
Query: 253 --------------------TAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCF 290
AA + F V Y PR S +F++ A+ + +
Sbjct: 250 MKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQW 309
Query: 291 SVGMRFKMRFEGEDSPE-RRFTGTIVG--VGDFSEQWPGSKWRSLKIQWD 337
GMRFKM FE EDS F GTI V D +WP S WR L++ D
Sbjct: 310 CPGMRFKMAFETEDSSRISWFMGTIASAQVAD-PIRWPNSPWRLLQVLLD 358
>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
Length = 680
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 192/402 (47%), Gaps = 86/402 (21%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V +P RV YFPQGH E A N + + +P +LCRV ++
Sbjct: 11 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNPR----IPPLVLCRVSAVK 64
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCL--------PEPPKQTVHSFCKILTASDT 137
LA+ E+DEVYA+I L P + TE + D L PE P SF K LT SD
Sbjct: 65 YLADPESDEVYAKIRLIPLRN-TEGETEDDVLMGGNGIEAPEKPA----SFAKTLTQSDA 119
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A P LD + P Q + AKD+HG WRF+HI+RG PRRHLLTTGW
Sbjct: 120 NNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTTGW 179
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSV----------ISSQSMH 247
S FV K LVAGD+ VFLR ENG+L VG+RR A + P S S +
Sbjct: 180 SNFVNKKNLVAGDSIVFLRAENGDLCVGIRR-AKRAGCGPESPSGWNPASGNGTSPYRGY 238
Query: 248 LGVL---------------------------ATAAHAVKTSTLFIVYYKPRTS--QFIIG 278
G L A AA F++ Y PR S +F +
Sbjct: 239 SGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVK 298
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWR----- 330
+ A+ + GM+FKM FE +DS F G I V V D +WP S WR
Sbjct: 299 ASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVND-PIRWPNSPWRLLQVL 357
Query: 331 ------------------SLKIQWDEPATVQRPERVSPWEIE 354
L++ WDEP +Q +RV+PW +E
Sbjct: 358 EYEIQKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVE 399
>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 191/382 (50%), Gaps = 46/382 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
++W+ACAG V++P RVYY+PQGH+E S++ S I C V I+
Sbjct: 17 KIWRACAGASVKIPALFSRVYYYPQGHVEHCCPSSSAVTA---------SPIACVVSSID 67
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQT--VHSFCKILTASDTSTHGGF 143
LLA+ TDEV+A +TLHP Q + + P Q E ++ V +F K+LTASD + GGF
Sbjct: 68 LLADPITDEVFAHLTLHPAAAQDQFQFPPQSRFEEEDESEKVVTFAKVLTASDANNGGGF 127
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R A PPLD P Q+L D+HG W F+HI+RG PRRHLLTTGWS FV S
Sbjct: 128 SVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPRRHLLTTGWSKFVNS 187
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSM----------------- 246
K+L+ GD+ VF+R E+ +GVRR S SS +
Sbjct: 188 KKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGGYYGVKKEDGGEKFR 247
Query: 247 HLGVLATAAHAVKTST-------LFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFK 297
+G+ A AV + F V Y P S+F++ + + ++ G R K
Sbjct: 248 RVGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWSEFVVRAEDVEASTNVYWTPGTRVK 307
Query: 298 MRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFV 357
M E EDS + IV F E W+ L+I WDEP +Q +RV+PW++E
Sbjct: 308 MAMETEDSSRITWFQGIVSA-TFQE-----TWKQLQITWDEPEILQNLKRVNPWQVEAVT 361
Query: 358 ASAP---LNLAQPAVKSKRPRS 376
AS+ P +SK P +
Sbjct: 362 ASSTQLHATYPPPPKRSKYPHA 383
>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
Length = 1160
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 228/499 (45%), Gaps = 61/499 (12%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G L LW CAG VE+P RVYYFPQGH +Q +S + L+ PL +LCR
Sbjct: 14 GVLDPALWLVCAGTTVEIPTLHSRVYYFPQGHFDQ-ASSAPRNLS---PLLLSKPAVLCR 69
Query: 81 VVHIELLAEQETDEVYAQITLHPETD------QTEPRSPDQCLPEPPKQTVHSFCKILTA 134
V ++ LA+ TDEV+A++ LHP D + + + V SF K+LTA
Sbjct: 70 VESVQFLADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTA 129
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A PPL+ P Q L D+HG+ W F+HI+RG PRRHLLT
Sbjct: 130 SDANNGGGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLT 189
Query: 195 TGWSTFVTSKRLVAGDAFVFLR---------------------GENGELRVGVRRLAHQQ 233
TGWSTFV +K+LVAGD VF++ G+ G +R+ V ++
Sbjct: 190 TGWSTFVNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEEEE 249
Query: 234 SSMPSSVISSQSMHL---GVLAT------AAHAVKTSTLFIVYY-KPRTSQFIIGLNKYL 283
+ G L+ A A + +VYY K R S+F++
Sbjct: 250 EEEEEEEEVREVFSRDGRGKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVKTEAVN 309
Query: 284 EAVHHCFSVGMRFKMRFEGEDSPERRFT-GTIVGVGDFSE-QWPGSKWRSLKIQWDEPAT 341
EA+ +S G+R K+ E +DS + GT+ V QW GS WR L++ WDEP
Sbjct: 310 EAMKVAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDEPEG 369
Query: 342 VQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQVV 401
+Q + VSPW++E + L+ A P +K + A S + G +T
Sbjct: 370 LQIAKWVSPWQVELVSTTPALHSAFPPIKRIK------AAHDSGVFTNGERDPFPMTGFT 423
Query: 402 GATEGQSSESQV--------VRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRP 453
+T GQ +++ + ++ R ++ N TD R+ S + S P
Sbjct: 424 NSTMGQLNQALLSYGTFPAGMQGARHDAFSASRFCNYPTDMSRLCMGNS----FGKSTFP 479
Query: 454 GNTVIHEEVERGKKSEASL 472
+ EV G L
Sbjct: 480 WLKTLETEVNVGSSQSDEL 498
>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
gi|194699576|gb|ACF83872.1| unknown [Zea mays]
gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 373
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 173/348 (49%), Gaps = 41/348 (11%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 86 LLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
LA+ ETDEV+A+I L P E + EPR PE ++ + SF K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPRE-FGIDPEDAREKLSSFAKTLTQSDANNGG 131
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R A P LD P Q + AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT-------- 253
K+LVAGD+ VFLR E+GEL VG+RR + + G L+
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 254 ----------------------AAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHC 289
AA + F V Y PR T +F++ A+ +
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQ 311
Query: 290 FSVGMRFKMRFEGEDSPE-RRFTGTIVG--VGDFSEQWPGSKWRSLKI 334
+ GMRFKM FE EDS F GTI V D + +WP S WR L++
Sbjct: 312 WCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLLQV 358
>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 715
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 195/415 (46%), Gaps = 60/415 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG + VP G VYYFPQGH EQ + ++ +P + CRV +
Sbjct: 23 QLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGAGAVDMPR------VPDLVPCRVSAVR 76
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSP---DQCLPEPPKQTVH-----SFCKILTASDT 137
+A+ ++DEV+A+I L P + EP + EP +Q SF K LT SD
Sbjct: 77 FMADPQSDEVFAKIRLLP-LRRGEPVADVGEAAAAREPLQQDADNNKPASFAKTLTQSDA 135
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A P LD P Q + +D+HG E++F+HI+RG PRRHLLTTGW
Sbjct: 136 NNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIYRGTPRRHLLTTGW 195
Query: 198 STFVTSKRLVAGDAFVFLRGE---------NGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
S FV K+L+AGD+ VFLR + +R R PSS S +
Sbjct: 196 SNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVEGPSSAASGWDHYR 255
Query: 249 GVLATAAHAVKTST-------------------------LFIVYYKPR--TSQFIIGLNK 281
G++ A + +F V Y PR T +F +
Sbjct: 256 GLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVYYPRASTPEFCVRAGA 315
Query: 282 YLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSLKIQWDEP 339
A+ + GMRFKM FE EDS F GT+ GV WP S WR L++ WDEP
Sbjct: 316 VKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVHWPQSPWRLLQVSWDEP 375
Query: 340 ATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR-----PRSIDIPASASAFWYQ 389
+Q +RV PW +E V+S P NL P+ R P D P S F+ Q
Sbjct: 376 ELLQNVKRVCPWLVE-LVSSMP-NLHLPSFSPPRKKPRIPTCADFPLDGSHFFLQ 428
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRDKWAVVFTDDEGDMML 609
+ KV ++ A+GR +DL+ L +++L+ + MF+I+ +LR V + G++
Sbjct: 637 QCKVFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIESAELRNN----VHYRSAAGEVKN 692
Query: 610 AGDDQWPEFCKMVKKIFIYSTEE 632
GD+ + F K +++ I++ E
Sbjct: 693 VGDEPFRAFVKSARRLTIFAEAE 715
>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
Length = 694
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 190/618 (30%), Positives = 273/618 (44%), Gaps = 89/618 (14%)
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQ--CLPEPPKQTVHSFCK 130
+P +LCRV+ I+ +A+ E+DEV+A++ L P D Q E + SF K
Sbjct: 100 IPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAK 159
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRR 190
LT SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRR
Sbjct: 160 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 219
Query: 191 HLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR---------------------- 228
HLLTTGWS FV K+LVAGD+ VF+R E+G+L VG+RR
Sbjct: 220 HLLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGS 279
Query: 229 ------LAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL------FIVYYKPR--TSQ 274
L +S+ S + G +A A ++ +TL F V Y PR TS+
Sbjct: 280 CGYSSLLREDESNSLRRSNCSLADRKGKVA-AESVIEAATLAINGRGFEVVYYPRASTSE 338
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRS 331
F + A+ + GMRFKM FE EDS F GT+ V V D +WP S WR
Sbjct: 339 FCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSD-PIRWPNSPWRL 397
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ---PAVKSKRPR---------SIDI 379
L++ WDEP +Q +RV+PW +E P+ L P K + P+ SI +
Sbjct: 398 LQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPV 457
Query: 380 PASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVA 439
P+ S + + S + V +G + + ++ +N
Sbjct: 458 PSFPSNPLIRSNPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNR--------PP 509
Query: 440 AQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAP-----LGRK 494
S S G I E+G C+L N +T + L K
Sbjct: 510 PPPQPSALPLSQPLGLRNIDSRNEKG-------FCFLTMGTTPCNDDTESKKSHIVLFGK 562
Query: 495 VVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT-RTK 553
++ P S KGS A + S L + G NK AA T K
Sbjct: 563 LILPEEQISE-KGSTDTA---NTSGGSKLSSSEEG------SPCSNKAHDAAGLETGHCK 612
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDD 613
V M+ VGR +DL+ L Y++L +L MF IQ + +V++ D G + AG++
Sbjct: 613 VFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIQ---KAEMLSSVLYRDASGAIKYAGNE 669
Query: 614 QWPEFCKMVKKIFIYSTE 631
+ EF K +++ I + +
Sbjct: 670 PFSEFLKTARRLTIVTEQ 687
>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
Length = 379
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 180/359 (50%), Gaps = 52/359 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQE--PLFDLPSKILCRVVH 83
+LW ACAG +V++P RVYYF QGH E + E P LP +LCRV
Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPR-ALPPLVLCRVEG 74
Query: 84 IELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLP--------EPPKQTVHSFCKILTA 134
++ LA++++DEVYA+I L P + E R PD+ P EP + SF K LT
Sbjct: 75 VQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQ 134
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 135 SDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 194
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------- 228
TGWSTFV K+LVAGD+ VFLR +GEL VG+RR
Sbjct: 195 TGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFS 254
Query: 229 --LAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL------FIVYYKPRTS--QFIIG 278
L ++S + M A V+ ++L F V Y PR S F++
Sbjct: 255 AFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVVK 314
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKI 334
A+ + GMRFKM FE EDS F GTI V V D +WP S WR L++
Sbjct: 315 AASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVAD-PNRWPNSPWRLLQV 372
>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
Length = 588
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/365 (37%), Positives = 195/365 (53%), Gaps = 32/365 (8%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G ++ +LW ACAGP VP G VYYFPQGH E A+ + L H P + CR
Sbjct: 31 GSVHPQLWYACAGPTCTVPPVGTAVYYFPQGHAEHAGAAADANL-HAPPF------VPCR 83
Query: 81 VVHIELLAEQETDEVYAQITL------HPETDQTEPRS-PDQCLPEPPKQTVHSFCKILT 133
V + +AE +TDE++ +I L P TD E + D+ P + V S K LT
Sbjct: 84 VAGVRFMAELDTDEIFVKIRLDPLRSGEPLTDVGEAQVVNDEAGQRQPTRPVISSAKTLT 143
Query: 134 ASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL 193
SD+ + G SV R A P LD ++ P Q ++A+D+HG EW F+H++RG P R+LL
Sbjct: 144 KSDSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTPERNLL 203
Query: 194 TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL--AHQQSSMPSSVISSQSMHLGVL 251
TTGWS FV SK++V GD+ VFLR E+G + +G+RR A ++++ ++ + G
Sbjct: 204 TTGWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRGNASGTGAA 263
Query: 252 ATAA-----------HAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKM 298
A F V + PR + F + + +EA+ + G+RFKM
Sbjct: 264 ADGVLRAEDVVAAAVTLAAAGNPFEVVHYPRATAPAFCVRVATVIEALQVSWCPGLRFKM 323
Query: 299 RFEGED-SPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPF 356
FE +D S F GT+ GVG +WP S WR L++ WDEP V+ R+SPW++E
Sbjct: 324 AFEAKDLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPWQVE-L 382
Query: 357 VASAP 361
VA+ P
Sbjct: 383 VATMP 387
>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 551
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 197/370 (53%), Gaps = 29/370 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
++W+ACAG V++P+ RVYYFPQGH+E AS + L+ PL + C V ++
Sbjct: 12 KIWRACAGAAVQIPKLHSRVYYFPQGHMEH--ASPSHYLS---PLIRSLPFVPCHVSSLD 66
Query: 86 LLAEQETDEVYAQITLHPET-DQTEPRSPD-------QCLPEPPKQTVHSFCKILTASDT 137
LA+ +DEV+A+ L P + Q +P D + V SF KILT SD
Sbjct: 67 FLADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPSDA 126
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A C PPLD P Q L+ D+HG EWRF+HI+RG PRRHL TTGW
Sbjct: 127 NNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHLFTTGW 186
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS---------SVISSQSMHL 248
S FV K+LVAGD VF++ +G + VG+RR A +++ + S ++ +
Sbjct: 187 SKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRSTTGRVTA 246
Query: 249 GVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSP 306
+A AA + + F V Y PRT + F++ E++ + GMR K+ E EDS
Sbjct: 247 EAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKISMETEDSS 306
Query: 307 ERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
+ V SE P WR L++ WDEP +Q ++VSPW++E + S P L
Sbjct: 307 RMTWYQGTVSSACASENGP---WRMLQVNWDEPEVLQNAKQVSPWQVE--LVSPPFALHT 361
Query: 367 PAVKSKRPRS 376
+KR R+
Sbjct: 362 VFSPNKRLRA 371
>gi|62321072|dbj|BAD94156.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 313
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 184/306 (60%), Gaps = 28/306 (9%)
Query: 338 EPATVQRPERVSPWEIEPFVASAPLNLAQPA-VKSKRPR------SIDIPASASAFWYQG 390
EPA++ RP +VSPWEIEPFV S N+ + +K+KRPR ++D+ +AS W
Sbjct: 1 EPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSV 58
Query: 391 STQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASS 450
TQ H+ Q T SS Q R + S +NN+ + + VA S L+ S
Sbjct: 59 LTQPHEFAQSC-ITSQWSSPQQCHRDANEDAKKSDWLNNSYSVSN--VAKDSTLNDQMVS 115
Query: 451 GRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSAR 510
VE+ KK E + LFGIDL +S+ A P + P + K +
Sbjct: 116 P----------VEQ-KKPETTANYRLFGIDL-MSSSLAVPEEKTA--PMRPINISKPTMD 161
Query: 511 AASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTAL 570
+ SD + ++ +E K+ A+ S KE Q+KQ S STR+RTKVQMQG+ VGRAVDL AL
Sbjct: 162 SHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQSS--STRSRTKVQMQGVPVGRAVDLNAL 219
Query: 571 KGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYST 630
KGY++L D++EK+F+I+G+LR R++W +VFTDDEGDMML GDD WPEFC MVK+IFI+S
Sbjct: 220 KGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSK 279
Query: 631 EEVKNM 636
EEVK M
Sbjct: 280 EEVKKM 285
>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
Length = 648
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 193/410 (47%), Gaps = 60/410 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW A AG +V++P +V+YFPQGH E N + +PS I CRV I
Sbjct: 31 QLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSK-----IPSFIPCRVEAIR 85
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLP---EPPKQTVHSFCKILTASDTSTHGG 142
+A ETDEVYA++ L P D K SF K LT SD + GG
Sbjct: 86 YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGG 145
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FS R A P LD + P Q++ KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 146 FSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVS 205
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQS------------------------SMPS 238
K+L +GD+ VFLR ENG+L VG+RR + + PS
Sbjct: 206 DKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSGIGICAAPPYGGFPS 265
Query: 239 S-----------------VISSQSMHLGVLAT--AAHAVKTST---LFIVYYKPR--TSQ 274
+IS M G + AV+ T F V Y PR T +
Sbjct: 266 FSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVVYYPRSGTPE 325
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSEQWPGSKWRSLK 333
F + + A+ + GMRFKM E EDS F GT+ V W S WR L+
Sbjct: 326 FFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADPSWSDSMWRLLE 385
Query: 334 IQWDEPATVQRPERVSPWEIEPF--VASAPLN-LAQPAVKSKRPRSIDIP 380
+ WDEP ++ +RV+PW++E + S PL+ P K + P+ D P
Sbjct: 386 VTWDEPELLKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLRLPQLPDFP 435
>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
Length = 155
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 111/138 (80%)
Query: 11 SLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL 70
+ S QG LY E WKACAGPLV+V + GERVY FPQGH+EQLEASTNQEL + P+
Sbjct: 16 NFSGQGNGVKDALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQLEASTNQELNQRIPM 75
Query: 71 FDLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCK 130
F+LP KILCRV +I+LLAEQ+TDEVYAQITL PE DQTEP SPD C EPPK VHSFCK
Sbjct: 76 FNLPPKILCRVFNIQLLAEQDTDEVYAQITLMPEADQTEPISPDSCPEEPPKPDVHSFCK 135
Query: 131 ILTASDTSTHGGFSVLRK 148
+LTASDTSTHG FSVLRK
Sbjct: 136 VLTASDTSTHGEFSVLRK 153
>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
Length = 1252
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 193/410 (47%), Gaps = 60/410 (14%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW A AG +V++P +V+YFPQGH E N + +PS I CRV I
Sbjct: 31 QLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSK-----IPSFIPCRVEAIR 85
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLP---EPPKQTVHSFCKILTASDTSTHGG 142
+A ETDEVYA++ L P D K SF K LT SD + GG
Sbjct: 86 YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGG 145
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FS R A P LD + P Q++ KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 146 FSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVS 205
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQS------------------------SMPS 238
K+L +GD+ VFLR ENG+L VG+RR + + PS
Sbjct: 206 DKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSGIGICAAPPYGGFPS 265
Query: 239 S-----------------VISSQSMHLGVLAT--AAHAVKTST---LFIVYYKPR--TSQ 274
+IS M G + AV+ T F V Y PR T +
Sbjct: 266 FSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVVYYPRSGTPE 325
Query: 275 FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSEQWPGSKWRSLK 333
F + + A+ + GMRFKM E EDS F GT+ V W S WR L+
Sbjct: 326 FFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADPSWSDSMWRLLE 385
Query: 334 IQWDEPATVQRPERVSPWEIEPF--VASAPLN-LAQPAVKSKRPRSIDIP 380
+ WDEP ++ +RV+PW++E + S PL+ P K + P+ D P
Sbjct: 386 VTWDEPELLKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLRLPQLPDFP 435
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 164/349 (46%), Gaps = 41/349 (11%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIEL 86
LW A AG +V++P +V+YFPQGH E N + +PS I CRV I
Sbjct: 810 LWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSK-----IPSFIPCRVEDIRY 864
Query: 87 LAEQETDEVYAQITLHPETDQTEPRSPDQCLP---EPPKQTVHSFCKILTASDTSTHGGF 143
+A ETDEVYA++ L P D K SF K LT SD + GGF
Sbjct: 865 MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGF 924
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
S R A P +D + P Q + KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 925 SCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSD 984
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS------------------------ 239
K+L +GD+ VFLR ENGELRVG+ R P+
Sbjct: 985 KKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEEDNKLRRNGKGNG 1044
Query: 240 -VISSQSMHLGVLAT--AAHAVKTST---LFIVYYKPR--TSQFIIGLNKYLEAVHHCFS 291
+IS M G + AV+ T F V Y PR T +F + + + +
Sbjct: 1045 LLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGITLQIRWC 1104
Query: 292 VGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEP 339
GMRFKM E EDS F GT+ V WP S WR L+ + +P
Sbjct: 1105 PGMRFKMPIETEDSSRISWFIGTVASVQAADPSWPDSLWRLLQPSFQQP 1153
>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
Length = 624
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 196/393 (49%), Gaps = 71/393 (18%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPL-FDLPSKILCRVVHIE 85
+W+ACAG V +P RVYYFPQGH+EQ AS+ L+ PL F PS +LCRVV +
Sbjct: 16 IWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLS---PLVFSKPS-VLCRVVAVW 69
Query: 86 LLAEQETDEVYAQITLHP-----ETDQTEPR---SPDQCLPEPPKQTVHSFCKILTASDT 137
LA+Q+TDEV+A+I L P E+ E R D + + V SF KILT+SD
Sbjct: 70 FLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDA 129
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
+ GGFSV R A PPL+ P Q L DL G +W F+HI+RG PRRHLLTTGW
Sbjct: 130 NNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGW 189
Query: 198 STFVTSKRLVAGDAFVFL-RGENGELRVGVRRLAHQ---------QSSMPSSVISSQSMH 247
S FV K+LVAGD+ VF+ R N EL +GVRR A +S++ +V + +
Sbjct: 190 SKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEVGS 249
Query: 248 LGVLATAAHAVKTSTL-------------FIVYYKPR--TSQFIIGLNKYLEAVHHCFSV 292
+ + ++ + F V Y PR +S F++ EA+ ++
Sbjct: 250 IEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTG 309
Query: 293 GMRFKMRFEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSL------------------ 332
GMR KM E EDS + F GT+ W GS WR L
Sbjct: 310 GMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQTWSYLQDTKMRSLIVTF 369
Query: 333 -----------KIQWDEPATVQRPERVSPWEIE 354
K+ WDEP +Q RVSPW++E
Sbjct: 370 FSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVE 402
>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
Length = 381
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 180/364 (49%), Gaps = 44/364 (12%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R+LW ACAG + VP G VYYFPQGH E EL+ +P+ + CRV +
Sbjct: 20 RQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAAR----VPALVPCRVASV 75
Query: 85 ELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+A+ +TDEV+A+I L P + D E D + SF K LT SD +
Sbjct: 76 RYMADPDTDEVFARIRLVPLRAAEDGDVEE----DGAAAGEEHEKPASFAKTLTQSDANN 131
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD P Q + AKD+HG W F+HI+RG PRRHLLTTGWST
Sbjct: 132 GGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWST 191
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR-------------------------LAHQQS 234
FV K+LVAGD+ VFLRG+ G+L VG+RR L +
Sbjct: 192 FVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNA 251
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSV 292
S ++ + L AA F V Y PR S +F + A+ +
Sbjct: 252 SPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCP 311
Query: 293 GMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVS 349
GMRFKM FE EDS F GT+ V V D +WP S WR L+++++ T + + +
Sbjct: 312 GMRFKMAFETEDSSRISWFMGTVASVQVAD-PIRWPQSPWRLLQVRYNIYTTANQSKFFA 370
Query: 350 PWEI 353
P+ +
Sbjct: 371 PFSL 374
>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
Length = 392
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 173/364 (47%), Gaps = 56/364 (15%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
G G G + +LW ACAG + VP G VYYFPQGH EQ A+ + PL
Sbjct: 13 GDGGGSVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSARVPPL------ 66
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHP------------ETDQTEPRSPDQCLPEPPKQT 124
+ CRVV + +A+ E+DEV+A+I L P R + P P
Sbjct: 67 VPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRP---- 122
Query: 125 VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIF 184
SF K LT SD + GGFSV R A P LD + P Q + AKD+HG EW F+HI+
Sbjct: 123 -TSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIY 181
Query: 185 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS-----S 239
RG PRRHLLTTGWS FV K+L AGD+ VF+R E G + VG+RR S+ S
Sbjct: 182 RGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLS 241
Query: 240 VISSQSMHLGVL------------------------ATAAHAVKTSTLFIVYYKPR--TS 273
I + G++ TAA T F V Y PR T
Sbjct: 242 SIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTP 301
Query: 274 QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGV-GDFSEQWPGSKWRS 331
+F + A+ + GMRFKM FE EDS F GT+ GV +WP S WR
Sbjct: 302 EFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRL 361
Query: 332 LKIQ 335
L++
Sbjct: 362 LQVH 365
>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 189/397 (47%), Gaps = 52/397 (13%)
Query: 20 SGDLYRE----LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPS 75
+ D RE +W+ACAG V++P RVYYFPQGH+E S L F +
Sbjct: 8 TADFLREVDPQIWRACAGASVQIPSLYSRVYYFPQGHVEH---SCPSSLISS---FSTAA 61
Query: 76 KILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE---------------- 119
+ C V +ELLA+ TDEV+A + L +P SP+ P
Sbjct: 62 PVPCVVSAVELLADPITDEVFAHLAL-------QPISPEHFSPSNFSGFGSDDDDDNNSN 114
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
K V +F KILT SD + GGFSV R A PPLD P Q+L D+HG W
Sbjct: 115 SNKNKVVTFAKILTPSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWD 174
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLA---HQQSSM 236
F+HI+RG PRRHLLTTGWS FV K+L+AGD+ VF+R E+ +GVRR H
Sbjct: 175 FRHIYRGTPRRHLLTTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPISNHGDEYY 234
Query: 237 PSSVISSQSMHLGVLATAA------HAVKTSTLFIVYYKPRT-SQFIIGLNKYLEAVHHC 289
+ + +G L A AV+ +VYY S F++ +
Sbjct: 235 GGGKKGFRRIGMGKLTAEAVSEAVNKAVQGYPFEVVYYPTAGWSDFVVRAEDVEVFMAGY 294
Query: 290 FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVS 349
+S G R KM E EDS + +V F E W+ L+I WDEP +Q +RV+
Sbjct: 295 WSPGTRVKMAMETEDSSRVTWFQGVVS-STFQET---GLWKQLQITWDEPEILQNLKRVN 350
Query: 350 PWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASASAF 386
PW++E S+ L P K +P S SAS F
Sbjct: 351 PWQVEVVANSSHLLAIYPPAKRLKPSS-----SASGF 382
>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
Length = 360
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 161/326 (49%), Gaps = 38/326 (11%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P RVYYFPQGH E LP +LC V +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 86 LLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
LA+ ETDEV+A+I L P E + EPR PE ++ + SF K LT SD + G
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGEVEFGEPRE-FGIDPEDAREKLSSFAKTLTQSDANNGG 131
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R A P LD P Q + AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 132 GFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFV 191
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLAT-------- 253
K+LVAGD+ VFLR E+GEL VG+RR + + G L+
Sbjct: 192 NQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGK 251
Query: 254 ----------------------AAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC 289
AA + F V Y PR S +F++ A+ +
Sbjct: 252 ITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQ 311
Query: 290 FSVGMRFKMRFEGEDSPERR-FTGTI 314
+ GMRFKM FE EDS F GTI
Sbjct: 312 WCPGMRFKMAFETEDSSRISWFMGTI 337
>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 188/387 (48%), Gaps = 56/387 (14%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD-LPSK---ILCRVV 82
+W+ACAG V++P RVYYFPQGH+E H PL LPS + C +
Sbjct: 20 IWRACAGASVQIPLLYSRVYYFPQGHVE-----------HCCPLISTLPSSTSPVPCLIT 68
Query: 83 HIELLAEQETDEVYAQITLHPET-DQTEPRSP------DQCLPEPPKQTVHSFCKILTAS 135
I+LLA+ TDEV+A + L P T +Q P + D + + V +F KILT S
Sbjct: 69 SIQLLADPITDEVFAHLVLQPVTQEQFTPTNYSRFGRYDGDVDD--NNKVTTFAKILTPS 126
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
D + GGFSV R A PPLD + P Q+L D+HG W F+HI+RG PRRHLLTT
Sbjct: 127 DANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYRGTPRRHLLTT 186
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLA-------------------HQQSSM 236
GWS FV SK+L+AGD+ VF++ E+ +GVRR + QSS+
Sbjct: 187 GWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYGGDEYNGYYSQSSV 246
Query: 237 PSSVISSQ----------SMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLE 284
S + + A + F V Y P S+F++
Sbjct: 247 AKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAGWSEFVVRAEDVES 306
Query: 285 AVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQ 343
++ ++ G R KM E EDS F G + + W GS W+ L+I WDEP +Q
Sbjct: 307 SMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQ 366
Query: 344 RPERVSPWEIEPFVASAPLNLAQPAVK 370
+RV+PW++E + L+ P K
Sbjct: 367 NVKRVNPWQVEIVANATQLHATFPPAK 393
>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
Length = 375
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 177/349 (50%), Gaps = 46/349 (13%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIEL 86
LW+ACAG +V++P V YFPQGH E A N E +PS I CRV I+
Sbjct: 20 LWQACAGTMVKMPAVDSIVLYFPQGHAEH--AGVNVEFRSD---VKIPSYIPCRVSSIKY 74
Query: 87 LAEQETDEVYAQITLHPETDQTEPRSPDQ----CLPEPPKQTVHSFCKILTASDTSTHGG 142
+AE+ETDEV+A+I L P +P++ + + SF K LT SD + GG
Sbjct: 75 MAERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSDNSRKPLSFAKTLTQSDANNGGG 134
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV + A P LD + P Q L+A D+HG W+F+HI+RG P RHLLTTGWSTFV
Sbjct: 135 FSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIYRGTPERHLLTTGWSTFVN 194
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSM---------PS--------------- 238
K+LVAGD+ VFLR EN ++ +G+RR+ + +M PS
Sbjct: 195 QKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWWFPSVGNLTIPRGGFSAFL 254
Query: 239 ----------SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAV 286
S+I+ ++ + A F V + P+ T +F + ++ A+
Sbjct: 255 RDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYPQSTTPEFFVKASRVKAAL 314
Query: 287 HHCFSVGMRFKMRFEGEDSPERRFTGTIVGV-GDFSEQWPGSKWRSLKI 334
+ GMRFKM FE ED F GTI V + QWP S WR L++
Sbjct: 315 QIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWPDSPWRMLQV 363
>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
Length = 585
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 193/407 (47%), Gaps = 73/407 (17%)
Query: 20 SGDL-YRE----LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD-L 73
+GD+ +RE +W+ACAG V++P RVYYFPQGH+E H PL L
Sbjct: 8 AGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVE-----------HCCPLLSTL 56
Query: 74 PSK---ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ------- 123
PS + C + I+LLA+ TDEV+A + L P T Q Q P Q
Sbjct: 57 PSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQ-------QFTPTNYSQFGRFDGD 109
Query: 124 -----TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW 178
V +F KILT SD + GGFSV R A P L+ + P Q+L D+HG W
Sbjct: 110 VDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVW 169
Query: 179 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR---------- 228
F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVRR
Sbjct: 170 DFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGS 229
Query: 229 ----------------LAHQQSSMPSSVI---SSQSMHLGVLATAAHAVKTSTLFIVYYK 269
+A + P + + + A + F V +
Sbjct: 230 SYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFY 289
Query: 270 PRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSEQWPG 326
P S+F++ ++ ++ G R KM E EDS F G + + W G
Sbjct: 290 PAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRG 349
Query: 327 SKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
S W+ L+I WDEP +Q +RV+PW++E +A+ L P +KR
Sbjct: 350 SPWKQLQITWDEPEILQNVKRVNPWQVE--IAAHATQLHTPFPPAKR 394
>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 585
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 192/407 (47%), Gaps = 73/407 (17%)
Query: 20 SGDL-YRE----LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD-L 73
+GD+ +RE +W+ACAG V++P RVYYFPQGH+E H PL L
Sbjct: 8 AGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVE-----------HCCPLLSTL 56
Query: 74 PSK---ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----------- 119
PS + C + I+LLA+ TDEV+A + L P T Q Q P
Sbjct: 57 PSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQ-------QFTPTNYSRFGRFDGD 109
Query: 120 -PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW 178
V +F KILT SD + GGFSV R A P L+ + P Q+L D+HG W
Sbjct: 110 VDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVW 169
Query: 179 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR---------- 228
F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVRR
Sbjct: 170 DFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGS 229
Query: 229 ----------------LAHQQSSMPSSVI---SSQSMHLGVLATAAHAVKTSTLFIVYYK 269
+A + P + + + A + F V +
Sbjct: 230 SYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFY 289
Query: 270 PRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSEQWPG 326
P S+F++ ++ ++ G R KM E EDS F G + + W G
Sbjct: 290 PAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRG 349
Query: 327 SKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
S W+ L+I WDEP +Q +RV+PW++E +A+ L P +KR
Sbjct: 350 SPWKQLQITWDEPEILQNVKRVNPWQVE--IAAHATQLHTPFPPAKR 394
>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
Length = 596
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 192/407 (47%), Gaps = 73/407 (17%)
Query: 20 SGDL-YRE----LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD-L 73
+GD+ +RE +W+ACAG V++P RVYYFPQGH+E H PL L
Sbjct: 8 AGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVE-----------HCCPLLSTL 56
Query: 74 PSK---ILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----------- 119
PS + C + I+LLA+ TDEV+A + L P T Q Q P
Sbjct: 57 PSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQ-------QFTPTNYSRFGRFDGD 109
Query: 120 -PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW 178
V +F KILT SD + GGFSV R A P L+ + P Q+L D+HG W
Sbjct: 110 VDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVW 169
Query: 179 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR---------- 228
F+HI+RG PRRHLLTTGWS FV SK+L+AGD+ VF+R E+ +GVRR
Sbjct: 170 DFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGS 229
Query: 229 ----------------LAHQQSSMPSSVI---SSQSMHLGVLATAAHAVKTSTLFIVYYK 269
+A + P + + + A + F V +
Sbjct: 230 SYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFY 289
Query: 270 PRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGVGDFSEQWPG 326
P S+F++ ++ ++ G R KM E EDS F G + + W G
Sbjct: 290 PAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRG 349
Query: 327 SKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
S W+ L+I WDEP +Q +RV+PW++E +A+ L P +KR
Sbjct: 350 SPWKQLQITWDEPEILQNVKRVNPWQVE--IAAHATQLHTPFPPAKR 394
>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 192/408 (47%), Gaps = 63/408 (15%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +V+YFPQGH E +++ + +P ILC V ++
Sbjct: 11 QLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSNVDFGAAR----IPIPPLILCCVAAVK 66
Query: 86 LLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
LA+ ETDEV+A++ + P E D + E P SF K LT SD + G
Sbjct: 67 FLADPETDEVFARLRMVPLRNSELDYEDSDGNGAEGSEKPA----SFAKTLTQSDANNGG 122
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 123 GFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFV 182
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRRLAH---------------------QQSSMPSSV 240
K+LVAGD+ VFLR ENG+L VG+RR
Sbjct: 183 NQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSSSGGGLGPGPGLGLGPG 242
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHH--------CF-S 291
G L + V++ + R + + N+ E V++ C +
Sbjct: 243 PGPYGAFSGFLREESKVVRSGRPKVSGESVREAVTLAASNQPFEVVYYPRANTPEFCIRT 302
Query: 292 VGMRFKMR------------FEGEDSPERR-FTGTIVGVGDFSE-QWPGSKWRSLKIQWD 337
+R MR FE EDS F GTI V +WP S WR L++ WD
Sbjct: 303 SAVRGAMRIQWSSGMRFKMPFETEDSSRISWFMGTIASVQLLDPIRWPNSPWRLLQVTWD 362
Query: 338 EPATVQRPERVSPWEIE-----PFVASAPLNLAQPAVKSKRPRSIDIP 380
EP + +RVSPW +E P + AP + P K + P+ + P
Sbjct: 363 EPDLLHNVKRVSPWLVELVSNVPIIHLAP--FSPPRKKLRFPQHPEFP 408
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDE 604
S + KV ++ VGR +DL+ L Y++L+ L MF I+ R V++ D
Sbjct: 583 VGSDTSHCKVFIESEDVGRTLDLSCLGSYEELYMRLANMFGIE---RSEMLSHVLYRDAA 639
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKN 635
G + G++ + EF K K++ I + K+
Sbjct: 640 GALKQTGEEPFSEFMKTAKRLTILTDSNNKD 670
>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
Length = 521
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 199/386 (51%), Gaps = 50/386 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTN-QELTHQE---PLFDLPSKILCRV 81
++W+ CAGP V VP+ +VYYFP GH+E S N Q +T + P F C +
Sbjct: 12 KIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNPQTITVIDGYGPSFP------CII 65
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTE-PRSPDQCLPEPPKQTVHSFCKILTASDTSTH 140
++LLA+ TDEV+A++ L P T+ E P D+ + SF K LT SD++
Sbjct: 66 TAVDLLADPHTDEVFAKLLLSPVTEGQEFPEVVDE--EDDGGDKFVSFVKTLTKSDSNNG 123
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R A P LD+ P+Q+L+ D+H W+F H++RG+P+RHL TTGW+ F
Sbjct: 124 GGFSVPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTTGWTPF 183
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVIS-----------------S 243
V +K+LVAGD+ VF++ G++ VG+RR ++ +V + S
Sbjct: 184 VNTKKLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVKREGFS 243
Query: 244 QSMHLGVLAT-----AAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRF 296
+ G+L A + + F V Y PR + F++ N +A+ ++ GMR
Sbjct: 244 RGGRRGMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVDANVVDDAMKIGWASGMRV 303
Query: 297 KMRFEGEDSPERRFT-----GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPW 351
K+ + ++S + T GTI V WR L++ WDE +Q RV+PW
Sbjct: 304 KLPLKIDESSNSKMTFFQPQGTISNVSSVPN------WRMLQVNWDELEILQNQNRVNPW 357
Query: 352 EIEPFVASAPLNLAQPAVKSKRPRSI 377
++E + ++L P + +K+PR +
Sbjct: 358 QVELISHTPAVHL--PFLSTKKPRLV 381
>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
Length = 752
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Query: 15 QGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
+GG L ++LW+ACAG +V++P G ++ YFPQGH EQ AS+ P +P
Sbjct: 30 RGGGEEKHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQ-AASSPDFPRALGPAGTVP 88
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTA 134
CRV+ ++ LA++ETDEV+A + LHPE+ E L P++ SF K LT
Sbjct: 89 ----CRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAALSPSPEKPA-SFAKTLTQ 143
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A P LD ++ P Q + AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 144 SDANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLT 203
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
TGWSTFV K+LVAGDA VFLR +GEL VGVRR
Sbjct: 204 TGWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRR 237
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 250 VLATAAHAVKTSTLFIVYY-KPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE- 307
VL A A +VYY + T++F + A+ H + GMRFKM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRI 370
Query: 308 RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
F GTI V WP S WR L++ WDEP +Q RVSPW++E V++ P+ L
Sbjct: 371 SWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE-LVSTLPMQLPP 429
Query: 367 PAVKSKRPRSIDIPASAS 384
++ K+ R P S
Sbjct: 430 FSLPRKKFRQTPAPEGQS 447
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 551 RTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI-QGQLRPRDKWAVVFTDDEGDMML 609
+ +V M+ V R +DL++ YD+L+ +L +F + ++ R VV+ D EG +
Sbjct: 672 QCRVFMESGDVKRTLDLSSFGSYDELYKQLATVFCVDMAKISGR----VVYKDSEGSTIH 727
Query: 610 AGDDQWPEFCKMVKKIFIYS 629
G + + F K V+++ I +
Sbjct: 728 TGGEPYANFVKSVRRLTILA 747
>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
Length = 793
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L ++LW+ACAG +V++P G ++ YFPQGH EQ AS+ P +P CRV+
Sbjct: 38 LDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQ-AASSPDFPRALGPAGTVP----CRVL 92
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGG 142
++ LA++ETDEV+A + LHPE+ E P P + SF K LT SD + GG
Sbjct: 93 SVKFLADKETDEVFASLRLHPESGSDEDND-RAAAPSPSPEKPASFAKTLTQSDANNGGG 151
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R A P LD ++ P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 152 FSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 211
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRR 228
K+LVAGDA VFLR +GEL VGVRR
Sbjct: 212 HKKLVAGDAIVFLRSNSGELCVGVRR 237
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 250 VLATAAHAVKTSTLFIVYY-KPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE- 307
VL A A +VYY + T++F + A+ H + GMRFKM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRI 370
Query: 308 RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
F GTI V WP S WR L++ WDEP +Q RVSPW++E V++ P+ L
Sbjct: 371 SWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE-LVSTLPMQLPP 429
Query: 367 PAVKSKRPRSIDIPASAS 384
++ KR R P S
Sbjct: 430 FSLPRKRFRQTPAPEGQS 447
>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
Length = 1067
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 139/217 (64%), Gaps = 20/217 (9%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQL------EASTNQELTHQEPLF-DLPSKIL 78
ELW ACAGPLV +P G V YFPQGH EQ+ AS +++ P + +LPSK++
Sbjct: 44 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLPSKLI 103
Query: 79 CRVVHIELLAEQETDEVYAQITLHP------ETDQTEPRSPDQCLPEPPKQTVHSFCKIL 132
C + + L A+ +TDEVYAQ+TL P E Q + Q P+ + FCK L
Sbjct: 104 CLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKQARPQ-----MEFFCKTL 158
Query: 133 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHL 192
TASDTSTHGGFSV R+ A + PPLD ++ P QEL A+D+H W F+HI+RGQP+RHL
Sbjct: 159 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHL 218
Query: 193 LTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGVR 227
LTTGWS FV+ KRL AGD+ + +R ++ ++ +G+R
Sbjct: 219 LTTGWSLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L L +MF I+GQL R + W +V+ D E D
Sbjct: 934 RTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 992
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 993 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1023
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 50/96 (52%), Gaps = 18/96 (18%)
Query: 288 HC----FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQ 343
HC S+GMRF+M FE E+ RR+ GTI G+ D + WDE A +
Sbjct: 244 HCDSNQISLGMRFRMMFETEELGTRRYMGTITGISDLD-----------PVGWDESAAGE 292
Query: 344 RPERVSPWEIEPFVASAPLNLA-QPAVKSKRPRSID 378
R RVS WEIEP +AP L QP KRPR +D
Sbjct: 293 RRNRVSIWEIEP--VAAPFFLCPQPFFGVKRPRQLD 326
>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
Length = 241
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 10/212 (4%)
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ-------- 123
+L + CRVV + L A+ DEVYAQ+ L P+ Q E + D + ++
Sbjct: 25 NLRPHVFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADTEEEDLEGAGK 84
Query: 124 --TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFK 181
T H FCK LTASDTSTHGGFSV R+ A +C PPLD P+QEL AKDLHG W+F+
Sbjct: 85 STTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGMGWKFR 144
Query: 182 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVI 241
HI+RGQPRRHLLTTGWS FV K+LV+GDA +FLR +GELR+GVRR A ++
Sbjct: 145 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSNYLAP 204
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS 273
SQ +++ + +A+ + F + Y PR S
Sbjct: 205 YSQLLNVSGIVDVVNAISSRNAFNICYNPRAS 236
>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 179/363 (49%), Gaps = 38/363 (10%)
Query: 10 CSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP 69
C +G P S D +LW ACAG + VP G VYYFPQGH EQ A+ +
Sbjct: 9 CPADGEGQPRSVDA--QLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAVDLSAA---- 62
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITL------HPETDQTEPRSPDQCLPEPPKQ 123
+P+ + CRV + +A+ +DEV+A+I L P D + + Q P+ +
Sbjct: 63 --CVPALLPCRVSAVRFMADAHSDEVFAKIRLVPLRHGDPAVDVGDAAA--QGRPQDDRP 118
Query: 124 TVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHI 183
SF K LT SD + GGFSV R A P LD + P Q + +D+HG E++F+HI
Sbjct: 119 KPASFAKTLTQSDANNGGGFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHI 178
Query: 184 FRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLA------------H 231
+RG PRRHLLTTGWS FV K+L+AGD+ VFLR + GE+ VGVRR H
Sbjct: 179 YRGTPRRHLLTTGWSNFVNQKKLLAGDSIVFLRSDGGEVHVGVRRAKRVFCDEGHSGWDH 238
Query: 232 QQSSMPSSVISSQSMHLGVLATAAHAVKTSTL------FIVYYKPRTS--QFIIGLNKYL 283
+ M S A V + L F V Y PR S +F +
Sbjct: 239 YRGLMRGGNAGSGDAAAKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCVRAGAVR 298
Query: 284 EAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTIVGV-GDFSEQWPGSKWRSLKIQWDEPAT 341
A+ + GMRFKM FE EDS F GT+ G+ +WP S WR L+++ T
Sbjct: 299 AAMQVQWRPGMRFKMAFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQVRTPPHGT 358
Query: 342 VQR 344
+ R
Sbjct: 359 LWR 361
>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 125/209 (59%), Gaps = 12/209 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW+ACAG +V++P V+YFPQGH E A + PL ILCRV ++
Sbjct: 10 QLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRVASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR 228
FV K+L+AGD+ VFLR E GEL VG+RR
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGELCVGIRR 212
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 264 FIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVG 318
F V Y PR S +F + + A+ + GMRFKM FE EDS F GT+ V V
Sbjct: 290 FEVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVA 349
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPR 375
D +WP S WR L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+
Sbjct: 350 D-PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKLRIPQ 407
Query: 376 SIDIPASASAF 386
D P + F
Sbjct: 408 PFDFPFDGTKF 418
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 651
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 652 EPFSDFMRATKRLTI 666
>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
Length = 702
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 198/417 (47%), Gaps = 76/417 (18%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +V+YFPQGH E + + +P+ ILCRV I+
Sbjct: 21 QLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVDFRNCPR-----VPAHILCRVAAIK 75
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCL-----PEPPKQTVHSFCKILTASDTSTH 140
+A+ TDEVYA+I L P + E D + E P + SF K LT SD +
Sbjct: 76 FMADPGTDEVYAKIRLVP-LNGAEAGYEDDGIGGLNGTETPDKPA-SFAKTLTQSDANNG 133
Query: 141 GGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTG STF
Sbjct: 134 GGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGSSTF 193
Query: 201 VTSKRLVAGDAFV----------------------------------------------F 214
V K+LV+GD+ V F
Sbjct: 194 VNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTVPYGGFSAF 253
Query: 215 LR-GENGELRVGVRRLAHQQSS-MPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR- 271
LR EN ++ G ++ S M + +S V A A +VYY PR
Sbjct: 254 LREDENKLMKNGHGNGSNSNGSLMGKGKVGPES----VFEAATLAANGQPFEVVYY-PRA 308
Query: 272 -TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSE--QWPGS 327
T +F + + A+ + GMRFKM FE EDS F GTI V +E +WP S
Sbjct: 309 STPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSV-QVAEPLRWPES 367
Query: 328 KWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP----LNLAQPAVKSKRPRSIDIP 380
WR L++ WDEP +Q +RVSPW +E V++ P + P K + P+ D P
Sbjct: 368 PWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLTPFSPPRKKMRLPQHPDFP 423
>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
Length = 703
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 124/209 (59%), Gaps = 12/209 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P V+YFPQGH E A + PL ILCRV ++
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRVASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR 228
FV K+L+AGD+ VFLR E G+L VG+RR
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGDLCVGIRR 212
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 264 FIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVG 318
F V Y PR S +F + + A+ + GMRFKM FE EDS F GT+ V V
Sbjct: 290 FEVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVA 349
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPR 375
D +WP S WR L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+
Sbjct: 350 D-PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKLRIPQ 407
Query: 376 SIDIPASASAF 386
D P + F
Sbjct: 408 PFDFPFDGTKF 418
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 651
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 652 EPFSDFMRATKRLTI 666
>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 614
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 128/171 (74%), Gaps = 6/171 (3%)
Query: 227 RRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLE 284
RR Q S++PSSVISS SMHLGVLATA HA+ T ++F VYYKPRTS +FII ++Y+E
Sbjct: 38 RRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYME 97
Query: 285 AVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQR 344
+V + +S+GMRF+MRFEGE++PE+RFTGTIVG + + WP S WRSLK++WDEP+T+ R
Sbjct: 98 SVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPR 157
Query: 345 PERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPAS--ASAFWYQGSTQ 393
P+RVSPW+IEP +S P+N P + KRPR P S +S +G+T+
Sbjct: 158 PDRVSPWKIEP-ASSPPVN-PLPLSRVKRPRPNVPPVSPESSVLTKEGATK 206
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ YD+L EL++MFE G+L
Sbjct: 476 APNSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFGDYDELTAELDRMFEFGGEL 534
Query: 591 RPRDK-WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
++ W +V+TD EGDMML GDD W EFC +V+KIFIY+ EEV+ M + S
Sbjct: 535 MSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKEEVQKMNSKS 585
>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
Length = 460
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 192/364 (52%), Gaps = 34/364 (9%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQE----LTHQEPLFDLPSKILCR 80
RE+W+ AGP ++P+ +V+YFP GH+E S N E + P+ I C
Sbjct: 11 REIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLINSYRPI------IPCV 64
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQT--EPRSPDQCLPEPPKQTVHSFCKILTASDTS 138
V ++LLA+ +TDEV+A++ L P T+ + EP+ P+ E + K LT SD +
Sbjct: 65 VSDVDLLADLQTDEVFAKLILTPITNDSVHEPQEPEVRENEHGGDRLVFSGKTLTQSDAN 124
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
G FSV + A PPLD+T P+Q L KD+H + W F+H +RG P+RHL+TT WS
Sbjct: 125 NGGAFSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLITTKWS 184
Query: 199 TFVTSKRLVAGDAFVFL----RGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATA 254
FV +K+++ GD+ V + + ++ +G+RR H+ S+ ++ I+ +S V+ A
Sbjct: 185 KFVDTKKIIGGDSLVLMKISKDKDKDKIFIGIRR--HKLSA--AAKITEKS----VMEAA 236
Query: 255 AHAVKTSTLFIVYYKPRTSQ---FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-- 309
A K T ++YY P S F++ +A+ + GMR K + ++S +R
Sbjct: 237 ELADKNMTFEVIYY-PTASHWCNFVVDAEAVKKAMQINWQSGMRVKHCLKTDESSKRSSI 295
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV 369
F GT+ + D S WR L++ WDE Q P +VSPW+IE + L L P
Sbjct: 296 FQGTVSALSDPSHH----PWRMLQVNWDESEVSQNPSQVSPWQIELISHTPALPLQFPPQ 351
Query: 370 KSKR 373
K R
Sbjct: 352 KKLR 355
>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 124/209 (59%), Gaps = 12/209 (5%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW+ACAG +V++P V+YFPQGH E A + PL ILCRV ++
Sbjct: 10 QLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVPPL------ILCRVASVK 63
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVH------SFCKILTASDTST 139
LA+ ETDEVY++ITL P D L P V+ SF K LT SD +
Sbjct: 64 FLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANN 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P LD T P Q + AKD+HG +F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHLLTTGWST 183
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR 228
FV K+L+AGD+ VFLR E GEL VG+RR
Sbjct: 184 FVNQKKLIAGDSIVFLRSETGELCVGIRR 212
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 264 FIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVG 318
F V Y PR S +F + + A+ + GMRFKM FE EDS F GT+ V V
Sbjct: 290 FEVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAVQVA 349
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP---LNLAQPAVKSKRPR 375
D +WP S WR L++ WDEP +Q +RVSPW +E V++ P L+ P K + P+
Sbjct: 350 D-PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE-LVSNMPAIHLSPFSPRKKLRIPQ 407
Query: 376 SIDIPASASAF 386
D P + F
Sbjct: 408 PFDFPFDGTKF 418
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ + Y +L+ +L +MF I+ R VV+ D G GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEE--RSDLLTHVVYRDANGVTKRIGD 651
Query: 613 DQWPEFCKMVKKIFI 627
+ + +F + K++ I
Sbjct: 652 EPFSDFMRATKRLTI 666
>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 545
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 185/367 (50%), Gaps = 29/367 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
++W+ACAG V++P+ RVYYFPQGH+E S + PL + C V ++
Sbjct: 12 KIWRACAGAAVQIPKLHSRVYYFPQGHLEHASPSH-----YLNPLLRSLPFVPCHVSSLD 66
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK---QTVHSFCKILTASDTSTHGG 142
LA+ +DEV+A+ L P + Q P + E K V SF KILT SD + GG
Sbjct: 67 FLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDRENGVVSFSKILTPSDANNGGG 126
Query: 143 FSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 202
FSV R A PPLD P+ +A +HI+RG PRRHL TTGWS FV
Sbjct: 127 FSVPRYCADSWFPPLDFXXXXPSSPVATSR---RRVALRHIYRGTPRRHLFTTGWSKFVN 183
Query: 203 SKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPS-----------SVISSQSMHLGVL 251
K+LVAGD VF++ +G + VG+RR A +++ + S ++ + +
Sbjct: 184 HKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSATGRVTAEAV 243
Query: 252 ATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
A AA + + F V Y PRT + F++ E++ + GMR K+ E EDS
Sbjct: 244 AAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKIAMETEDSSRMT 303
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV 369
+ V SE P WR L++ WDEP +Q +RVSPW++E + S P L
Sbjct: 304 WFQGTVSSACASENGP---WRMLQVNWDEPEVLQNAKRVSPWQVE--LVSLPFALHTVYS 358
Query: 370 KSKRPRS 376
+KR RS
Sbjct: 359 PNKRLRS 365
>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
Length = 630
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 194/690 (28%), Positives = 278/690 (40%), Gaps = 161/690 (23%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E + E P +P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
+A+ P+TD+ F KI
Sbjct: 79 FMAD-------------PDTDEV-------------------FAKIRL------------ 94
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
PT + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 95 -----------------VPT--VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKK 135
Query: 206 LVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ---------------SMHL-- 248
LVAGD+ VF+R ENG+L VG+RR P + SM L
Sbjct: 136 LVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRG 195
Query: 249 ----GVLATAAHA-----------VKTSTL------FIVYYKPRTS--QFIIGLNKYLEA 285
+A AA V+ + L F V Y PR S +F + A
Sbjct: 196 DDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPEFCVKAGAVRAA 255
Query: 286 VHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATV 342
+ + GMRFKM FE EDS F GT+ V V D +WP S WR L++ WDEP +
Sbjct: 256 MRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVAD-PIRWPNSPWRLLQVSWDEPDLL 314
Query: 343 QRPERVSPWEIE-----PFVASAPLNLAQPAVKSKRPRSIDIPASAS--AFWYQGSTQSH 395
Q +RVSPW +E P + AP + P K P ++P + G+ +
Sbjct: 315 QNVKRVSPWLVELVSNMPAIHLAP--FSPPRKKLCVPLYPELPIDGQFPTPMFHGNPLAR 372
Query: 396 DITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTD-----------DH----RIV-- 438
+ + +G + Q R Q I + ++ N DH RI
Sbjct: 373 GVGPMCYFPDGTPAGIQGAR-HAQFGISLSDLHLNKLQSSLSPHGLHQLDHGMQPRIAAG 431
Query: 439 ------AAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLG 492
AA+ +S + G P N + GKK+ A L LFG + +
Sbjct: 432 LIIGHPAARDDISCLLTIGSPQNN----KKSDGKKAPAQL--MLFGKPILTEQQISLGDA 485
Query: 493 RKVVDPTTGTSGVKGSARAASDFDAS-----QNQDLKEVKRGMADVSRKETQNKQGSAAS 547
V + + G + S+ D S QN + G + + NK
Sbjct: 486 ASVDVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTTDNLSCGGVPLCQ---DNKVLDVGL 542
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
KV MQ VGR +DL+ + Y++L+ L MF I+ + V + D G +
Sbjct: 543 ETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIE---KAELMSHVFYRDAAGAL 599
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
GD+ + EF K +++ I + N+A
Sbjct: 600 KHTGDEPFSEFTKTARRLNILTDTSGDNLA 629
>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
Length = 550
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 180/370 (48%), Gaps = 50/370 (13%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
LW+A +G + G VYYF QGH+EQ +T + L + +K C V +
Sbjct: 5 NLWRAFSGNSAHIHTVGSEVYYFVQGHLEQ---ATYVPTLSRSVLSNPITK--CIVSAAD 59
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEP---------PKQTVHSFCKILTASD 136
A+ +DEV ++ L+P P + P + + F K+LT+SD
Sbjct: 60 YTADPLSDEVCLKLNLNP----IPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLTSSD 115
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
+ GGFSV R A PPL+ + P Q LA D+HG W F+HI+RG PRRHLLTTG
Sbjct: 116 ANNGGGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTG 175
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ------------ 244
WS FV +K+L+AGDA +F R + ++ VG+RR + S +SQ
Sbjct: 176 WSKFVNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNVEEK 235
Query: 245 -----------SMHLG-----VLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAV 286
++G +ATAA F V Y PR TS+F+I K ++
Sbjct: 236 RSGDRSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEKVNNSL 295
Query: 287 HHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVG-DFSEQWPGSKWRSLKIQWDEPATVQR 344
++ + G+R KM E EDS + + + GT+ W GS WR L++ W+E +Q
Sbjct: 296 NYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDALQS 355
Query: 345 PERVSPWEIE 354
+ VSPWE+E
Sbjct: 356 AKFVSPWEVE 365
>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 716
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 127/207 (61%), Gaps = 9/207 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +V+YFPQGH E +A+ + + +P I CRV+ ++
Sbjct: 11 QLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSS-----LRIPPLIPCRVLAVK 65
Query: 86 LLAEQETDEVYAQITLHP----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
LA+ ETDEV+A + + P + + E E + SF K LT SD + G
Sbjct: 66 FLADLETDEVFANVRMVPLPNSDLNFEEEGGFGSSGSENNMEKPASFAKTLTQSDANNGG 125
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 201
GFSV R A P LD T P Q + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 126 GFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 185
Query: 202 TSKRLVAGDAFVFLRGENGELRVGVRR 228
K+LVAGD+ VFLR +NG+L VG+RR
Sbjct: 186 NQKKLVAGDSIVFLRSKNGDLCVGIRR 212
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 250 VLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
V+ AA A +VYY PR S +F + + A+ + GMRFKM FE EDS
Sbjct: 278 VMEAAALAASGQPFEVVYY-PRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSR 336
Query: 308 RR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL-- 362
F GTI V V D +WP S WR L++ WDEP +Q +RVSPW +E V++ P+
Sbjct: 337 ISWFMGTISSVQVAD-PIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIQ 394
Query: 363 --NLAQPAVKSKRPRSIDIP 380
+ P K + P+ D P
Sbjct: 395 LSPFSPPRKKFRLPQHPDFP 414
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR ++L+ + Y++L+ L MF G +P V++ D G + AGD
Sbjct: 608 KVFMESEDVGRTLNLSVISSYEELYRRLANMF---GMEKPDILSHVLYQDATGAVKQAGD 664
Query: 613 DQWPEFCKMVKKIFIYS 629
+ +F K +++ I +
Sbjct: 665 KPFSDFIKTARRLTILT 681
>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
Length = 652
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 178/393 (45%), Gaps = 75/393 (19%)
Query: 36 VEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD-LPSK---ILCRVVHIELLAEQE 91
V++P RVYYFPQGH+E H PL LPS + C + I+LLA+
Sbjct: 26 VQIPVLHSRVYYFPQGHVE-----------HCCPLLSTLPSSTSPVPCIITSIQLLADPV 74
Query: 92 TDEVYAQITLHPETDQTEPRSPDQCLPE------------PPKQTVHSFCKILTASDTST 139
TDEV+A + L P T Q Q P V +F KILT SD +
Sbjct: 75 TDEVFAHLILQPMTQQ-------QFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANN 127
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P L+ + P Q+L D+HG W F+HI+RG PRRHLLTTGWS
Sbjct: 128 GGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSK 187
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRR--------------------------LAHQQ 233
FV SK+L+AGD+ VF+R E+ +GVRR +A +
Sbjct: 188 FVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKED 247
Query: 234 SSMPSSVI---SSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHH 288
P + + + A + F V + P S+F++ ++
Sbjct: 248 DGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSM 307
Query: 289 CFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSEQWPGSKWRSLK-------IQWDEPA 340
++ G R KM E EDS F G + + W GS W+ L+ I WDEP
Sbjct: 308 YWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITWDEPE 367
Query: 341 TVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
+Q +RV+PW++E +A+ L P +KR
Sbjct: 368 ILQNVKRVNPWQVE--IAAHATQLHTPFPPAKR 398
>gi|298113241|gb|ADB96390.2| auxin response factor 18 [Arabidopsis thaliana]
Length = 231
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 148/297 (49%), Gaps = 72/297 (24%)
Query: 325 PGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPAVKSKRPR----SID 378
P SKWRSL++QWDEP TVQRP++VSPWEIEPF+A++P++ QP K KR R S+
Sbjct: 1 PASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVK 60
Query: 379 IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIV 438
PA S F Y P Q I++++ RI
Sbjct: 61 TPAPPS-FLYS-------------------------LPQSQDSINASLKLFQDPSLERIS 94
Query: 439 AAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDP 498
S + + P T LFG DL NS P ++ +D
Sbjct: 95 GGYSSNNSFKPETPPPPTNCSYR--------------LFGFDLSSNSPAPIPQDKQPMD- 139
Query: 499 TTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQG 558
T G + + + + S E + +Q S R+RTKVQMQG
Sbjct: 140 TCGAA---------------------KCQEPITPTSMSEQKKQQTS----RSRTKVQMQG 174
Query: 559 IAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
IAVGRAVDLT LK YD+L DELE+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W
Sbjct: 175 IAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPW 231
>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
Length = 518
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 183/385 (47%), Gaps = 58/385 (15%)
Query: 17 GPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSK 76
P G + R++W ACA PL +P G VYYFP GH EQ A H P
Sbjct: 8 APADGIVDRDVWLACAVPLSRLPTVGAEVYYFPHGHAEQCPA-------HLPAPIPAPHL 60
Query: 77 ILCRVVHIELLAEQETDEVYAQITLHP-------------------ETDQTEPRSPDQCL 117
C V ++ L A+ +T+EV+A+I+L P T ++E SP
Sbjct: 61 FPCIVTNLTLGADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSP---- 116
Query: 118 PEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYE 177
P P Q + F K LT SD + GGFSV R A P LD P Q L +D G
Sbjct: 117 PHPQPQELSYFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNP 176
Query: 178 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRL-------- 229
W+F+HI+RG PRRHLLTTGWS FV +K LVAGD VF+R NG+L VG+RR
Sbjct: 177 WQFRHIYRGTPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFP 236
Query: 230 -------AHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLN 280
A+Q P ++ V+ A A + F V Y PR + +F++ +
Sbjct: 237 GADANANANQDQQPPPRNARARVPPQDVMEAARLAAEGRP-FTVTYFPRQAAGEFVVPRD 295
Query: 281 KYLEAVHHCFSVGMRFKMR-FEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDE- 338
+ A+ + G +M+ E ED+ RR V + + WR+L+I WD+
Sbjct: 296 EVERALATRWEPGTEVRMQVMEAEDT--RRTVWADGHVKALHQ----NIWRALEIDWDDS 349
Query: 339 -PATVQRPERVSPWEIEPFVASAPL 362
P +++ V+ W+++ VA PL
Sbjct: 350 SPLSLKLSRFVNAWQVQ-LVAYPPL 373
>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
Length = 502
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 167/345 (48%), Gaps = 25/345 (7%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R++W ACA PL +P G +VYYFP GH EQ + L H P C V +
Sbjct: 13 RDVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAPLPH-------PHLFPCTVAAV 65
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFS 144
L A+ TDE +A I+L P + +P + K LT SD + GGFS
Sbjct: 66 ALSADPSTDEPFATISLVPGPHRALGGGAPHHAVDP---AFAHYAKQLTQSDANNGGGFS 122
Query: 145 VLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 204
V R A P LD P Q L +DL G W F+HI+RG PRRHLLTTGWS FV +K
Sbjct: 123 VPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLLTTGWSRFVNAK 182
Query: 205 RLVAGDAFVFLRGENGELRVGVRRLAH----QQSSMPSSVISSQSMHLGVLATAAHAVKT 260
LVAGDA VF+R +GEL GVRR Q + P ++ V A A +
Sbjct: 183 LLVAGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVPAQEVEDAARRAAQG 242
Query: 261 STLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVG 318
+ + YY PR +F++ + +A+ + G + +M+F PE R + I GV
Sbjct: 243 APFTVTYY-PRQGAGEFVVPRKEVEDALISPWEPGTQVRMQFL---HPEDRRSEWINGVV 298
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPER-VSPWEIEPFVASAPL 362
+ S WR L+I WDE A R V+ W+++ V PL
Sbjct: 299 RAVDH---SIWRMLEIDWDESAPPSLKNRHVNAWQVQ-LVGCPPL 339
>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
Length = 342
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 183/355 (51%), Gaps = 57/355 (16%)
Query: 334 IQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQ 393
+QWDEP+++ RP++VS WE+EP VAS PL+ QP ++KRPR +P+S
Sbjct: 1 VQWDEPSSILRPDKVSAWELEPLVASNPLS-TQPTQRNKRPRPTVLPSS----------- 48
Query: 394 SHDITQVVG-ATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGR 452
S D T + G +SS P R +++ S+ + + + A S L +S+
Sbjct: 49 SPDATVLGGWKPTVESSTFSYAEPQRGRDLYSSPKFSTAASNSLGFNANSSLGAVSSNNY 108
Query: 453 PGNT-------------VIHEEVERGKKSEASLGCWLFGIDLKHNSNT--AAPLGRKVVD 497
NT E VE KK + GC LFGI L NSN A+P+
Sbjct: 109 WCNTNRVENIMDPSSHGANREPVE--KKQNSRNGCRLFGIQLLGNSNVDEASPV------ 160
Query: 498 PTTGTSGVKGSARAASDFDASQNQDLKEVKRGM-------AD----VSRKETQNKQGSAA 546
+T G + D D Q+ + + R AD +S E+Q++Q
Sbjct: 161 -STPKMGGEDRLVPPIDTDFEQHSEPSNIHRSDIPSISCDADKSCLISPLESQSRQ---- 215
Query: 547 STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDDEG 605
R+ TKV MQGIAVGRAVDLT YDDL +LE+MF+I+G+L KW VV+TDDE
Sbjct: 216 -IRSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQVVYTDDED 274
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSEL 660
DMML GDD W EFC MV+KIFIY+TEEVK + S I + GE DS++
Sbjct: 275 DMMLVGDDPWNEFCSMVRKIFIYTTEEVKRL---SPKIKLPLGGEAKLSKPDSDI 326
>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
gi|224030297|gb|ACN34224.1| unknown [Zea mays]
gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
Length = 513
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 174/369 (47%), Gaps = 45/369 (12%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
G + R++W ACA PL +P G VYYFP GH EQ A H P
Sbjct: 14 GDSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPA-------HLPAPLPAPHLFP 66
Query: 79 CRVVHIELLAEQETDEVYAQITLHP-------ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
C V + L A+ ET+EV+A+I+L P +T+P S C P Q + F K
Sbjct: 67 CTVAGVSLGADDETNEVFAKISLSPGPHRGPAAACRTDPTS--DC----PPQELSYFTKE 120
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
LT SD + GGFSV R A P LD P Q+L +D G W+F+HI+RG PRRH
Sbjct: 121 LTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRRH 180
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMP-----SSVISSQSM 246
LLTTGWS FV +K LVAGD VF+R NG+L VG+RR P + V Q
Sbjct: 181 LLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPP 240
Query: 247 HLGVLA--------TAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRF 296
A AA F V Y PR + +FI+ ++ + + G +
Sbjct: 241 PRNARARVPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWEPGAQV 300
Query: 297 KMR-FEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDE--PATVQRPERVSPWEI 353
+M+ E ED+ RR V + + WR+L+I WD+ P + V+ W++
Sbjct: 301 RMQVMEAEDT--RRTVWADGHVKSLHQ----NIWRALEIDWDDSSPLSPNLSRFVNAWQV 354
Query: 354 EPFVASAPL 362
E V PL
Sbjct: 355 E-LVTHPPL 362
>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 159/341 (46%), Gaps = 29/341 (8%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R++W ACA PL VP G +VYYFP GH EQ + P +L C V +
Sbjct: 25 RDVWLACATPLSRVPVVGSQVYYFPHGHSEQCPTPP------RAPAHNL---FPCTVAAV 75
Query: 85 ELLAEQETDEVYAQITLHPETDQTE-PRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
L A+ +TDE +A ++L P + P P P + K LT SD + GGF
Sbjct: 76 RLFADPKTDEPFATVSLVPGPHRAPAPDLPHASARRPEPTAFRYYAKQLTQSDANNGGGF 135
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R A PPLD P Q L D G W F+HI+RG PRRHLLTTGWS FV +
Sbjct: 136 SVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSKFVNA 195
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAH-----QQSSMPSSVISSQSMHLGVLATAAHAV 258
K LVAGDA VF+R +GEL G+RR QQ + + + A
Sbjct: 196 KLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQEVDDAVRLA 255
Query: 259 KTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR---FTGT 313
F V Y PR +F++ + EA+ + G++ +M+F D+ ERR G
Sbjct: 256 AEGAPFTVTYYPRQGAGEFVVPKQEVEEALVGAWRPGVQVRMKF--LDAEERRSEWINGV 313
Query: 314 IVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+ V + WR L+I W E V+ W++E
Sbjct: 314 VKAVDP-------NIWRMLEINWAESVAGSLNRYVNAWQVE 347
>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 223/487 (45%), Gaps = 56/487 (11%)
Query: 166 QELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVG 225
+ + AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG
Sbjct: 74 ETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVG 133
Query: 226 VRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYL 283
+RR + + + + + AA F V Y PR S +F + +
Sbjct: 134 IRRAKRGIAGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVR 193
Query: 284 EAVHHCFSVGMRFKMRFEGEDSPE-RRFTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPA 340
AV + GMRFKM FE EDS F GTI V V D +WP S WR L++ WDEP
Sbjct: 194 SAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVAD-PIRWPNSPWRLLQVTWDEPD 252
Query: 341 TVQRPERVSPWEIEPFVASAPL----NLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHD 396
+Q +RVSPW +E V++ P+ + P K + P+ D P
Sbjct: 253 LLQNVKRVSPWLVE-LVSNMPIIHLSPFSPPRKKLRIPQHPDFPF--------------- 296
Query: 397 ITQVVGATEGQSSESQV-VRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGYASSGRPGN 455
+GQ S P+ + +N I A+ G + S +
Sbjct: 297 --------DGQFPMSSFSSNPLGSSSPLCCLPDNTPAG---IQGARHAQYGISLS----D 341
Query: 456 TVIHEEVERGKKSEASLGCWLF----GIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARA 511
++ +++ G K+ S+ C L +L+ ++N P P + +R
Sbjct: 342 LHLNNKLQSGLKNNESISCLLTMGNSSQNLEKSANEKTPQFLLFGQPILTEQQM---SRT 398
Query: 512 ASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT-RTKVQMQGIAVGRAVDLTAL 570
S SQ + K+ +++V Q Q + T KV M+ VGR++DL+ L
Sbjct: 399 CSSDAVSQ---VLTGKKNLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVL 455
Query: 571 KGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYST 630
Y++L+ L MF I+ R V++ D G + GD+ + +F K K++ I
Sbjct: 456 GSYEELYTRLANMFGIE---RSETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTILMD 512
Query: 631 EEVKNMA 637
N+
Sbjct: 513 SGSNNIG 519
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L +LW ACAG +V++P +V+YFPQGH E A TN + +P+ +LCRV
Sbjct: 8 LDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAAAP---RIPALVLCRVA 62
Query: 83 HIELLAEQETDEVYAQITLHPE 104
++ +A+ ETDE +H E
Sbjct: 63 AVKFMADPETDETVIAKDVHGE 84
>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 192
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 102/139 (73%), Gaps = 4/139 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+Y ELW CAGPLV VPR G++VYYFPQGHIEQ+EASTNQ +DLP KILC V+
Sbjct: 39 MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVM 98
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPP----KQTVHSFCKILTASDTS 138
++EL AE + DEVYAQ+TL PE+ E S ++ PP + VHSFCK LTASDTS
Sbjct: 99 NVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTS 158
Query: 139 THGGFSVLRKHATECLPPL 157
THGGFSVLR+HA ECLPPL
Sbjct: 159 THGGFSVLRRHADECLPPL 177
>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
Length = 622
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 49/352 (13%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
D++ +LW+ACAG + VP G YYFPQGH EQ A+ + + +P + CRV
Sbjct: 31 DVHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAAVDLRV--------VPPFVACRV 82
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ L+AE +TD++YA+I L P L + T
Sbjct: 83 AAVRLMAEPDTDDIYAKIRLVP----------------------------LRPWEPVTDV 114
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELA-AKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 200
G ++L + + + L+ AK L +W F+H++RG P RHL+T GWS F
Sbjct: 115 GDALLGEGSRGGDGDGQQRRRRRPRPLSFAKTLTQSDWTFRHVYRGNPPRHLITAGWSNF 174
Query: 201 VTSKRLVAGDAFVFLRGENGELRVGVRRLAH-------QQSSMPSSVISSQSMHLGVLAT 253
V +K+L+ GD+ VF+R E+G++ +G+RR +S + S + +
Sbjct: 175 VHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAVAGPSDGKVPAEDVVE 234
Query: 254 AAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGED-SPERRF 310
AA F V + PR S +F + + E++ + G+RFKM FE ED S F
Sbjct: 235 AARLAAAGQPFEVVHYPRASAPEFCVRADAVKESMRSPWCPGLRFKMAFETEDLSRISWF 294
Query: 311 TGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
GTI GV +WP S WR L++ WDEP +Q +RV PW +E V+S P
Sbjct: 295 MGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVE-LVSSMP 345
>gi|304308265|gb|ADL70445.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 226
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 145/292 (49%), Gaps = 72/292 (24%)
Query: 330 RSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPAVKSKRPR----SIDIPASA 383
RSL++QWDEP TVQRP++VSPWEIEPF+A++P++ QP K KR R S+ PA
Sbjct: 1 RSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPP 60
Query: 384 SAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSV 443
S F Y P Q I++++ RI S
Sbjct: 61 S-FLYS-------------------------LPQSQDSINASLKLFQDPSLERISGGYSS 94
Query: 444 LSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTS 503
+ + P T + LFG DL NS P ++ +D
Sbjct: 95 NNSFKPETPPPPT--------------NCSYRLFGFDLTSNSPAPIPQDKQPMD------ 134
Query: 504 GVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGR 563
G+A+ + + S E + +Q S R+RTKVQMQGIAVGR
Sbjct: 135 -TCGAAKC---------------QEPITPTSMSEQKKQQTS----RSRTKVQMQGIAVGR 174
Query: 564 AVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
AVDLT LK YD+L DELE+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W
Sbjct: 175 AVDLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPW 226
>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 125/221 (56%), Gaps = 27/221 (12%)
Query: 27 LWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTN------QELTHQEPLFDLPSKILCR 80
+W+ACAG V++P RVYYFPQGH+EQ +ST L +PL I C+
Sbjct: 1 IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPL------ISCQ 54
Query: 81 VVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK-------------QTVHS 127
+ ++ LA+ TDEV+ ++ L P + + P L EP + + +
Sbjct: 55 ISAVDFLADPVTDEVFIRLLLLPLNNHSC-NLPLSFL-EPSRSEGGGVNDVDDDENKILA 112
Query: 128 FCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
F KILT SD + GGFSV R A PPL+ P Q L D+HG W F+HI+RG
Sbjct: 113 FAKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGT 172
Query: 188 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
PRRHLLTTGWS FV +K+L+AGD+ VF+R GE+ +GVRR
Sbjct: 173 PRRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRR 213
>gi|304308269|gb|ADL70447.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 145/291 (49%), Gaps = 72/291 (24%)
Query: 331 SLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPAVKSKRPR----SIDIPASAS 384
SL++QWDEP TVQRP++VSPWEIEPF+A++P++ QP K KR R S+ PA S
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPPS 60
Query: 385 AFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVL 444
F Y P Q I++++ RI S+
Sbjct: 61 -FLYS-------------------------LPQSQDSINASLKLFQDPSLERISGGYSLN 94
Query: 445 SGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG 504
+ + P T + LFG DL NS P ++ +D
Sbjct: 95 NSFKPETPPPPT--------------NCSYRLFGFDLTSNSPAPIPQDKQPMD------- 133
Query: 505 VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRA 564
G+A+ + + S E + +Q S R+RTKVQMQGIAVGRA
Sbjct: 134 TCGAAKC---------------QEPITPTSMSEQKKQQTS----RSRTKVQMQGIAVGRA 174
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
VDLT LK YD+L DELE+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W
Sbjct: 175 VDLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPW 225
>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
Length = 695
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 168/371 (45%), Gaps = 63/371 (16%)
Query: 22 DLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRV 81
D++ LW+ACAG + VP G VYYFPQGH E + +P + CRV
Sbjct: 47 DVHPRLWQACAGSMRAVPPVGAAVYYFPQGHAEHAGGAAVD--------LRVPPFVPCRV 98
Query: 82 VHIELLAEQETDEVYAQITLHP----------------ETDQTE-----------PRSPD 114
+ L+A+ +TD+VYA+I L P +TD +
Sbjct: 99 AAVRLMADPDTDDVYARIRLVPLRAWEPVADVGDAALVKTDGSSRGGADGDGDGDAGGGQ 158
Query: 115 QCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLH 174
Q P P SF K LT SD + GGFSV R A P LD + + P Q ++A+D+H
Sbjct: 159 QQQPRP-----LSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFVSARDVH 213
Query: 175 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS 234
G EW F+HI+R PRR LL G +KR VF R G GV
Sbjct: 214 GVEWTFRHIYRSTPRRTLLNPG-CRLRRAKR-------VFCRRGGGGSNAGVAVAGPSDG 265
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSV 292
+P+ + AA F V + PR S +F++ E++ +
Sbjct: 266 KVPAEDV----------VEAARLAAAGQPFEVVHYPRASAPEFVVRAAAVKESMQAPWCP 315
Query: 293 GMRFKMRFEGED-SPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSP 350
G+RFKM FE ED S F GTI GV +WP S WR L++ WDEP ++ RV P
Sbjct: 316 GLRFKMAFETEDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRNVNRVCP 375
Query: 351 WEIEPFVASAP 361
W +E V+S P
Sbjct: 376 WRVE-LVSSMP 385
>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 114/169 (67%), Gaps = 8/169 (4%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YF QGH EQ+ ASTN+E+ + P + LP +++C++
Sbjct: 20 LNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQLICQL 79
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDT 137
++ + A+ ETDEVYAQ+TL P + Q + D LP P KQ + FCK LTASDT
Sbjct: 80 HNVTMHADVETDEVYAQLTLQPLSPQEQK---DAYLPADLGTPSKQPTNYFCKTLTASDT 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
STHGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRG
Sbjct: 137 STHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185
>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 120/214 (56%), Gaps = 15/214 (7%)
Query: 28 WKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIELL 87
W+ACAG V++P RVYYFPQGH EQ +ST L I C++ ++ L
Sbjct: 1 WRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAPHPPFLTNLALSKPSIPCQISAVDFL 60
Query: 88 AEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK-------------QTVHSFCKILTA 134
A+ TDEV+ ++ L P D P L EP + + + +F KILT
Sbjct: 61 ADPVTDEVFTRLLLIP-LDNPFSNLPLSFL-EPCRSEGEGANDVDDDERKILAFSKILTP 118
Query: 135 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
SD + GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLLT
Sbjct: 119 SDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPRRHLLT 178
Query: 195 TGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
TGWS FV +K+L+AGD+ VF+R GE+ +GVRR
Sbjct: 179 TGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRR 212
>gi|304308287|gb|ADL70456.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 144/291 (49%), Gaps = 72/291 (24%)
Query: 331 SLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPAVKSKRPR----SIDIPASAS 384
SL++QWDEP TVQRP++VSPWEIEPF+A++P++ QP K KR R S+ PA S
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPPS 60
Query: 385 AFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVL 444
F Y P Q I++++ RI S
Sbjct: 61 -FLYS-------------------------LPQSQDSINASLKLFQDPSLERISGGYSSN 94
Query: 445 SGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG 504
+ + P T + LFG DL NS P ++ +D
Sbjct: 95 NSFKPETPPPPT--------------NCSYRLFGFDLSSNSPAPIPQDKQPMD------- 133
Query: 505 VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRA 564
G+A+ + + S E + +Q S R+RTKVQMQGIAVGRA
Sbjct: 134 TCGAAKC---------------QEPITPTSMSEQKKQQTS----RSRTKVQMQGIAVGRA 174
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
VDLT LK YD+L DELE+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W
Sbjct: 175 VDLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPW 225
>gi|304308263|gb|ADL70444.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308267|gb|ADL70446.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308271|gb|ADL70448.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308273|gb|ADL70449.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308277|gb|ADL70451.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308279|gb|ADL70452.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308281|gb|ADL70453.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308283|gb|ADL70454.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 144/291 (49%), Gaps = 72/291 (24%)
Query: 331 SLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPAVKSKRPR----SIDIPASAS 384
SL++QWDEP TVQRP++VSPWEIEPF+A++P++ QP K KR R S+ PA S
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPPS 60
Query: 385 AFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVL 444
F Y P Q I++++ RI S
Sbjct: 61 -FLYS-------------------------LPQSQDSINASLKLFQDPSLERISGGYSSN 94
Query: 445 SGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSG 504
+ + P T + LFG DL NS P ++ +D
Sbjct: 95 NSFKPETPPPPT--------------NCSYRLFGFDLTSNSPAPIPQDKQPMD------- 133
Query: 505 VKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRA 564
G+A+ + + S E + +Q S R+RTKVQMQGIAVGRA
Sbjct: 134 TCGAAKC---------------QEPITPTSMSEQKKQQTS----RSRTKVQMQGIAVGRA 174
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
VDLT LK YD+L DELE+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W
Sbjct: 175 VDLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPW 225
>gi|304308275|gb|ADL70450.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308285|gb|ADL70455.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 224
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 143/290 (49%), Gaps = 72/290 (24%)
Query: 332 LKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPAVKSKRPR----SIDIPASASA 385
L++QWDEP TVQRP++VSPWEIEPF+A++P++ QP K KR R S+ PA S
Sbjct: 1 LQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPPS- 59
Query: 386 FWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLS 445
F Y P Q I++++ RI S +
Sbjct: 60 FLYS-------------------------LPQSQDSINASLKLFQDPSLERISGGYSSNN 94
Query: 446 GYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGV 505
+ P T + LFG DL NS P ++ +D
Sbjct: 95 SFKPETPPPPT--------------NCSYRLFGFDLTSNSPAPIPQDKQPMD-------T 133
Query: 506 KGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAV 565
G+A+ + + S E + +Q S R+RTKVQMQGIAVGRAV
Sbjct: 134 CGAAKC---------------QEPITPTSMSEQKKQQTS----RSRTKVQMQGIAVGRAV 174
Query: 566 DLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
DLT LK YD+L DELE+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W
Sbjct: 175 DLTLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPW 224
>gi|110739728|dbj|BAF01771.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 194
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 112/175 (64%), Gaps = 27/175 (15%)
Query: 476 LFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSR 535
LFG DL NS P ++ +D T G + + S M++ +
Sbjct: 34 LFGFDLTSNSPAPIPQDKQPMD-TCGAAKCQEPITPTS----------------MSEQKK 76
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK 595
++T +R+RTKVQMQGIAVGRAVDLT LK YD+L DELE+MFEIQGQL RDK
Sbjct: 77 QQT---------SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARDK 127
Query: 596 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
W VVFTDDEGDMMLAGDD W EFCKM KKIFIYS++EVK M T K I+SS+E E
Sbjct: 128 WIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLK-ISSSLENE 181
>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
Length = 410
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 164/328 (50%), Gaps = 42/328 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL-CRVVHI 84
++W+ CAG V++P+ VYYFP GH+E + S N L D + + C V +
Sbjct: 12 KIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPSPNPSTLS---LLDRSRQFIPCTVSTV 68
Query: 85 ELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQT---------VHSFCKILTAS 135
LLA+ TDEV+ ++ L P T+ C+ EPP + V S K LT S
Sbjct: 69 NLLADPVTDEVFVKLLLTPGTNN--------CVHEPPPEVREDQHDGVKVVSSGKTLTPS 120
Query: 136 DTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
D + G FSV + A PPLD+ P+Q+L+ D+HG EW+ +H++RG P RHL+TT
Sbjct: 121 DANNGGAFSVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPLRHLITT 180
Query: 196 GWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLA---HQQSSMPSSVISSQSMHLGVLA 252
WS FV K+L+ GD+ VF++ R G ++ H+Q ++ I+ +S +
Sbjct: 181 NWSEFVDEKKLIGGDSLVFMKKST---RTGTETISVGIHRQKFGAATKIAEKS-----VT 232
Query: 253 TAAHAVKTSTLFIVYYKPRT---SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPER- 308
A + + F V Y P F++ +A+ + ++ G+R K + ++S +R
Sbjct: 233 EAVELAEKNMAFDVVYYPTAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLKKDNSSKRC 292
Query: 309 -RFTGTIVGVGDFSEQWPGSKWRSLKIQ 335
F GTI + P WR L+++
Sbjct: 293 SNFEGTISALSA-----PNRPWRMLEVR 315
>gi|284811299|gb|ADB96388.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811301|gb|ADB96389.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811305|gb|ADB96391.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811307|gb|ADB96392.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 222
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 113/288 (39%), Positives = 141/288 (48%), Gaps = 72/288 (25%)
Query: 334 IQWDEPATVQRPERVSPWEIEPFVASAPLNLA--QPAVKSKRPR----SIDIPASASAFW 387
+QWDEP TVQRP++VSPWEIEPF+A++P++ QP K KR R S+ PA S F
Sbjct: 1 VQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPPS-FL 59
Query: 388 YQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAAQSVLSGY 447
Y P Q I++++ RI S + +
Sbjct: 60 YS-------------------------LPQSQDSINASLKLFQDPSLERISGGYSSNNSF 94
Query: 448 ASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKG 507
P T + LFG DL NS P ++ +D G
Sbjct: 95 KPETPPPPT--------------NCSYRLFGFDLTSNSPAPIPQDKQPMD-------TCG 133
Query: 508 SARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDL 567
+A+ + + S E + +Q S R+RTKVQMQGIAVGRAVDL
Sbjct: 134 AAKC---------------QEPITPTSMSEQKKQQTS----RSRTKVQMQGIAVGRAVDL 174
Query: 568 TALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQW 615
T LK YD+L DELE+MFEIQGQL RDKW VVFTDDEGDMMLAGDD W
Sbjct: 175 TLLKSYDELIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPW 222
>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
Length = 525
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 164/341 (48%), Gaps = 23/341 (6%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 85 ELLAEQETDEVYAQITLHP-ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGF 143
+L A+ T E YA I+L P D P L E Q + K LT SD + GGF
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEFRYYAKQLTQSDANNGGGF 139
Query: 144 SVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 203
SV R A P L++ P Q L DL G W F+HI+RG PRRHLLTTGWS FV +
Sbjct: 140 SVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKFVNA 199
Query: 204 KRLVAGDAFVFL----RGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
K+LVAGD VF+ +L VGVRR A + S S+ + + + A
Sbjct: 200 KQLVAGDTVVFMWCGAPAPERKLLVGVRRAA--RYSGESACNARGRVQPQEVMEAVRLAA 257
Query: 260 TSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMR-FEGEDSPERRFTGTIVG 316
F V Y PR +F++ + + + + GM+ + + E ED+ RR
Sbjct: 258 EQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRLAWLNGT 315
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPA--TVQRPERVSPWEIEP 355
+ + Q WR+L+++WD A + + V+PW+++P
Sbjct: 316 LTNLRHQ---QIWRTLEVEWDASAASSSMKNRFVNPWQVQP 353
>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
Length = 456
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 174/353 (49%), Gaps = 16/353 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
E+W CA V++P+ RVYYFPQGH+E S++ L LC V ++
Sbjct: 13 EIWHTCATAAVKIPKLHSRVYYFPQGHLENASPSSSSITHTHSFLQSFRPFTLCIVSAVD 72
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-PPKQTVHSFCKILTASDTSTHGGFS 144
LLA+ TDEV+ ++ L P T+ +P + + + V SF K LT SD + F
Sbjct: 73 LLADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSDVNNARSFH 132
Query: 145 VLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL-TTGWSTFVTS 203
+ R A P LD+ + +Q L D+HG +F H+ RG P+R++L + W++FV
Sbjct: 133 IPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYISEWNSFVKR 192
Query: 204 KRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTL 263
K+LVAGD+ +F++ G++ VG+RR + Q ++ + V+ A +
Sbjct: 193 KKLVAGDSVIFMKDSTGKIFVGIRR--NTQFVAAAAEQKKDELEKAVMEALKLAEENKAF 250
Query: 264 FIVYYKPRTS---QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
IVYY P+ F++ N E++ ++ MR KM+ + S + GTI V
Sbjct: 251 EIVYY-PQGDDWCDFVVDGNVVDESMKIQWNPRMRVKMK--TDKSSRIPYQGTISIVSRT 307
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKR 373
S + WR L++ WDE Q P RV+PW +E ++ P P K R
Sbjct: 308 S-----NLWRMLQVNWDEFQVSQIPRRVNPWWVE-LISHKPAPTPFPQTKKFR 354
>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 112/164 (68%), Gaps = 11/164 (6%)
Query: 248 LGVLATAAHAVKTSTLFIVYYKPRTSQ--FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
GVLA+A+HA+KT+++F+VYY+PR SQ +I+ +NKY A F+VGMRF+M FE ED
Sbjct: 1 FGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDV 60
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEP-ATVQRPERVSPWEIEPFVASAPL-- 362
P ++F GTIVG GDFS QW GS+W+SLK+QWD+ A PERVSPWEI+ S+P
Sbjct: 61 PVKKFFGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAIS 120
Query: 363 NLAQPAVKSKRPR----SIDIPAS--ASAFWYQGSTQSHDITQV 400
L Q + K+KRPR ++++P+ FW G TQ H+ T V
Sbjct: 121 TLLQSSAKNKRPRETNENMNLPSQEPTQEFWLSGVTQQHERTYV 164
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 5/103 (4%)
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR 593
S +E Q++Q S R R KVQM G AVGRAVDL +L GY+ L +ELE+MFEI+ +
Sbjct: 350 SPREIQSQQSSIG--RNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIKDI---K 404
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+ V F D+EGD M GDD W EFC+MV+KI IY E+ KNM
Sbjct: 405 QNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNM 447
>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 529
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 163/345 (47%), Gaps = 27/345 (7%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 85 ELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+L A+ T E YA I+L P P L E Q + K LT SD +
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANN 139
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P L++ P Q L DL G W F+HI+RG PRRHLLTTGWS
Sbjct: 140 GGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSK 199
Query: 200 FVTSKRLVAGDAFVFL----RGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAA 255
FV +K+LVAGD VF+ +L VGVRR A + S S+ + + + A
Sbjct: 200 FVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAA--RYSGESACNARGRVQPQEVMEAV 257
Query: 256 HAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMR-FEGEDSPERRFTG 312
F V Y PR +F++ + + + + GM+ + + E ED+ RR
Sbjct: 258 RLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRLAW 315
Query: 313 TIVGVGDFSEQWPGSKWRSLKIQWDEPA--TVQRPERVSPWEIEP 355
+ + Q WR+L+++WD A + + V+PW+++P
Sbjct: 316 LNGTLTNLRHQ---QIWRTLEVEWDASAASSSMKNRFVNPWQVQP 357
>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
gi|224031343|gb|ACN34747.1| unknown [Zea mays]
gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
Length = 462
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 158/349 (45%), Gaps = 40/349 (11%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L G G+ + R++W ACA PL +P G+ VYYFP GH EQ A H
Sbjct: 7 LPLANGHGNSIVDRDVWLACAAPLSRLPTVGDDVYYFPDGHAEQCPA-------HLPAPL 59
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHP---ETDQTEPRSPDQCLPEPPKQTVHSF 128
P C V I L A+ +TDEV+A+I+L P + +P S + PP++ +
Sbjct: 60 PAPHFFPCTVTDISLGADDKTDEVFAKISLRPGLAAASRPDPGSSNS----PPREPLSYS 115
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
K L+ SD + G F V R P +D P Q L D G +W F+H++R +
Sbjct: 116 IKELSQSDANGGGSFCVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQ 175
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHL 248
RH+LTTGWS FV +K LVAGD VF+R NG+L VG+RR+ ++ +
Sbjct: 176 PRHVLTTGWSKFVNAKLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDP 235
Query: 249 GV-----------------LATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHC 289
+ AA F V Y PR + +F++ N+ +
Sbjct: 236 DQPPPPPPRNALARVPPKDVMEAARLAAEGRPFTVTYYPRKAAGEFVVPRNEVEGVLDTL 295
Query: 290 FSVGMRFKMRF-EGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWD 337
+ G M+F E ED+ RR V ++ WR+L+I WD
Sbjct: 296 WEPGSHVLMQFAEAEDT--RRTMWADGHVKAIHQK----IWRALEIDWD 338
>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
Length = 207
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 110/197 (55%), Gaps = 8/197 (4%)
Query: 35 LVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDE 94
+V++P +V+YFPQGH E N + +PS I CRV I +A ETDE
Sbjct: 1 MVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSK-----IPSFIPCRVEDIRYMANHETDE 55
Query: 95 VYAQITLHPETDQTEPRSPDQCLP---EPPKQTVHSFCKILTASDTSTHGGFSVLRKHAT 151
VYA++ L P D K SF K LT SD + GGFS R A
Sbjct: 56 VYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGFSCPRYCAE 115
Query: 152 ECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDA 211
P +D + P Q + KD+HG +W F+H++RG P+RHLLTTGWS FV+ K+L +GD+
Sbjct: 116 MIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASGDS 175
Query: 212 FVFLRGENGELRVGVRR 228
VFLR ENGELRVG+ R
Sbjct: 176 VVFLRSENGELRVGIWR 192
>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
Length = 523
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 178/380 (46%), Gaps = 48/380 (12%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL-PSKILCRVVHI 84
++W+ AGP V++P+ G +VYYF +GH+E +S N E E L L P +LC + +
Sbjct: 12 KIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSSPNIE---TELLLCLRPPSVLCIISSV 68
Query: 85 ELLAEQETDEVYAQITLHPETDQ-----TEPRSPD---------QCL------PEPPK-- 122
+LLA TDEV+A++ L P T EP PD L P PP+
Sbjct: 69 DLLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPAPPEVP 128
Query: 123 -------QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHG 175
+ S+ KILT SD T G V R+ P LD+ +++L+ D+
Sbjct: 129 DEEDDDSNNLVSYVKILTQSD--TQSGLFVPRECMELIFPNLDLEDPMQSEKLSVTDIQD 186
Query: 176 YEWRFKHIFRGQP-RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS 234
W +K+ + + + TTGWS FV K+LVA D+ VF++ G++ VG+ R A +
Sbjct: 187 VVWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGICRKAMYPA 246
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT-SQFIIGLNKYLEAVHHCFSVG 293
+ S V A K +VYY F++ + EA+ + + G
Sbjct: 247 TEEEGGKSENLTEKAVKDAVELAGKNMAFQVVYYPTANWCDFVVDASVVDEAMKNGWEFG 306
Query: 294 MRFKMR---FEGEDSPERRF--TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERV 348
M K+R F +S + + GTI + + P WR L++ WD P Q P RV
Sbjct: 307 MGIKLRLNEFASSNSKKTYYQPKGTISNMSNVPSNVPS--WRMLQVNWDGPDISQNPNRV 364
Query: 349 SPWEIE----PFVASAPLNL 364
+PW+++ P +S+PL +
Sbjct: 365 NPWQVDIYPIPSQSSSPLQM 384
>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 166/350 (47%), Gaps = 33/350 (9%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
++W+ C GP V++P+ +VYYFP+GH+E A ++ + L S I C V ++
Sbjct: 12 KIWQICVGPDVKIPKIHSKVYYFPRGHLEH--ACSSPTAATRTILDRYRSSIPCIVSSVD 69
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ------TVHSFCKILTASDTST 139
L + TDEV+A++ L P TDQ P P P Q + S+ K LT SD +
Sbjct: 70 LFVDPHTDEVFAKLLLTPVTDQEPPP------PVVPGQEDDDGDNLVSYVKTLTQSDCTR 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
V + + P LD+ + Q + DL EWR+ + + R H TGW
Sbjct: 124 --VLCVPIECSNLIFPKLDLDKS---QSITVTDLKNQEWRYTYTYSNSSRLH---TGWLN 175
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV K+LVA D+ VF++ G++ VG+RR + + + + + VL A A K
Sbjct: 176 FVREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTDEIKVLDAAELAEK 235
Query: 260 TSTLFIVYYKPRTS---QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT----- 311
+ +VYY P S F++ +A+ + GMR K+ + +S + T
Sbjct: 236 NTAFDVVYY-PTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLK 294
Query: 312 GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
GTI V + S P WR L++ WD Q P V+PW++E + AP
Sbjct: 295 GTISFVFNHSSNVPN--WRILEVNWDGLDIPQIPNLVNPWQVEVYNIHAP 342
>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
Length = 273
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 100/192 (52%), Gaps = 41/192 (21%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
L ELW ACAGPLV +P G RV YFPQGH EQ
Sbjct: 21 LNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQ--------------------------- 53
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDTS 138
A+ ETDEVYAQ+TL P T Q + D LP P KQ + FCK LTASDTS
Sbjct: 54 -----ADVETDEVYAQMTLQPLTPQEQK---DTFLPVELGIPSKQPTNYFCKTLTASDTS 105
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
THGGFSV R+ A + PPLD + P QEL A+DLH EW+F+HIFRG R L W
Sbjct: 106 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RDSYLEQSWP 163
Query: 199 TFVTSKRLVAGD 210
S R V D
Sbjct: 164 VITLSGRRVGRD 175
>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 216 RGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQ- 274
RG++GELR+GVRR ++ + SQ +LG LA HAV T ++F ++Y PR SQ
Sbjct: 12 RGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQS 71
Query: 275 -FIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLK 333
FI+ K+ +++ FSVG RFKMR+E ED+ ERR+TG I G D +W GSKW+ L
Sbjct: 72 EFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADPRWRGSKWKCLL 131
Query: 334 IQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
++WD+ +RP R+SPWEIE A++ +LA P K +P
Sbjct: 132 VRWDDDGEFRRPNRLSPWEIELTSAASGSHLAAPTSKRMKP 172
>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
Length = 631
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 113/172 (65%), Gaps = 5/172 (2%)
Query: 214 FLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT- 272
+R +N +L +G+RR Q+ MPSSV+SS SMH+G+LA AAHA T++ F ++Y PR
Sbjct: 5 LVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRAS 64
Query: 273 -SQFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDF-SEQWPGSKW 329
S+F+I L KY++AV+H SVGMRF+M FE E+S RR+ GTI G+ D S +WP S W
Sbjct: 65 PSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHW 124
Query: 330 RSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIPA 381
RS+K+ WDE R RVS WEIEP + + P + ++ KRP +P+
Sbjct: 125 RSVKVGWDESTAGDRQPRVSLWEIEP-LTTFPTYTSPFPLRLKRPWPTGLPS 175
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G GR++D+T Y +L EL ++F ++GQL R W +VF D E D+
Sbjct: 564 TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDV 622
Query: 608 MLAGDDQW 615
+L GDD W
Sbjct: 623 LLVGDDPW 630
>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
gi|194708626|gb|ACF88397.1| unknown [Zea mays]
Length = 543
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 99/135 (73%), Gaps = 5/135 (3%)
Query: 263 LFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVGVGDF 320
+F VYYKPRTS +FII ++Y+E+V + +S+GMRF+MRFEGE++PE+RFTGTIVG +
Sbjct: 1 MFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60
Query: 321 SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIP 380
WP S WR LK++WDEP+T+ RP+RVSPW+IEP +S P+N + ++KRPR P
Sbjct: 61 DPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP-ASSPPVNPLVHSSRAKRPRQNVPP 119
Query: 381 AS--ASAFWYQGSTQ 393
S +S +G+T+
Sbjct: 120 PSLESSVLTKEGATK 134
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
Query: 531 ADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL 590
A S K+ Q+K ASTR+ TKV QG+A+GR+VDL+ Y +L EL+KMF+ +G+L
Sbjct: 411 APQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKMFDFEGEL 469
Query: 591 -RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
W +V+TDDEGDMML GDD W EFC +V+KI+IY+ EEV+ M + S
Sbjct: 470 VSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKS 520
>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 164/350 (46%), Gaps = 33/350 (9%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
++W+ CAGP V++P+ +VYYFP+GH+E A ++ + L S I C V ++
Sbjct: 12 KIWQICAGPDVKIPKIHSKVYYFPRGHLEH--ACSSPTAATRTILDRYRSSIPCIVSSVD 69
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQ------TVHSFCKILTASDTST 139
L + TDEV+A++ L P TDQ P P P Q + S+ K LT SD +
Sbjct: 70 LFVDPHTDEVFAKLLLTPVTDQEPPP------PVVPGQEDDDGDNLVSYVKTLTQSDCTR 123
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
V + + P LD+ + Q + DL E + + + R H TGW
Sbjct: 124 --VLCVPIECSNLIFPKLDLDKS---QSITVTDLKNQERGYTYTYSNSSRLH---TGWLN 175
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
FV K+LVA D+ VF++ G++ VG+RR + + + + VL A A K
Sbjct: 176 FVREKKLVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVLDAAELAEK 235
Query: 260 TSTLFIVYYKPRTS---QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT----- 311
+ +VYY P S F++ +A+ + GMR K+ + +S + T
Sbjct: 236 NTAFDVVYY-PTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLK 294
Query: 312 GTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
GTI V + S P WR L++ WD Q P V+PW++E + AP
Sbjct: 295 GTISFVYNHSSNVPN--WRMLEVNWDGLDIPQNPNLVNPWQVEVYNIPAP 342
>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
Length = 323
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 155/313 (49%), Gaps = 27/313 (8%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
++ ++W+ C G V++P+ RVYYFPQGH+E +S++ H L +C +
Sbjct: 17 VHPQIWQTCTGAAVQIPKLHSRVYYFPQGHLEHASSSSSNAYIHSLDLQRFRPFTICIIS 76
Query: 83 HIELLAEQETDEVYAQITLHPETDQT---EPRSPDQCLPEPP--KQTVHSFCKILTASDT 137
++LLA+ TDEV+A++ L P T+ + +P C + + + SF +IL ++
Sbjct: 77 AVDLLADPHTDEVFAKLLLTPVTNNSCVQDPHEVPNCSNDDDVCDEVIDSFTRILALTNV 136
Query: 138 STHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL-TTG 196
S H F + R A PPL M + +Q L D+HG W+F H+ G +R++ T+
Sbjct: 137 SKH-AFYIPRFCAENMFPPLGMEV---SQHLLVTDVHGEVWKFHHVCHGFAKRNVFYTSE 192
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRR--LAHQQSSMPSSVISSQSMHLGVLATA 254
W++FV K+L GDA VF++ G+L VG+RR A Q+ + V+
Sbjct: 193 WASFVERKKLDVGDAVVFMKNSTGKLFVGIRRKDAAEQK---------KDELEKAVMEAV 243
Query: 255 AHAVKTSTLFIVYYKPRT---SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFT 311
A + IVYY PR F++ N E++ ++ MR KM+ + S +
Sbjct: 244 KLAEENKPFEIVYY-PRGDDWCDFVVDGNIVDESMKIQWNPRMRVKMK--TDKSSRIPYQ 300
Query: 312 GTIVGVGDFSEQW 324
GTI V S W
Sbjct: 301 GTITTVSRTSNLW 313
>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
Length = 366
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 115/226 (50%), Gaps = 14/226 (6%)
Query: 17 GPGSGD--LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLP 74
G G GD + R++W ACA P VP G VYYFP GH EQ +H+ P
Sbjct: 10 GHGDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQ-HLLAPLPASHRFP----- 63
Query: 75 SKILCRVVHIELLAEQETDEVYAQITLHP---ETDQTEPRSPDQCLPEPPKQTVHSFCKI 131
C V + L AE TDEV+A+I+L P + EP P +Q + F
Sbjct: 64 --CTCTVTDVSLGAEDRTDEVFAKISLRPGPAAASRPEP-GPGPGSSNSTRQGLSYFVNE 120
Query: 132 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRH 191
L DTST G F + R P LD+ P Q+L +D G W+F HI+ + R+H
Sbjct: 121 LLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVKIRQH 180
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMP 237
LT GWS FV +K LVAGD VF+R NG+L +G+RR A + S P
Sbjct: 181 RLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRRKATRTSWRP 226
>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
Length = 239
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 16/207 (7%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
++W+ C G V++P+ +VYYFPQGH++ + T L H P PS I C + ++
Sbjct: 38 KIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHTIITLLHCYP----PS-ISCIISAVD 92
Query: 86 LLAEQETDEVYAQITLHPETDQT--EPRSPDQCLPEPPKQ-----TVHSFCKILTASDTS 138
LL + TDEV+A++ L P D E +P PE P + V SF KILT SD +
Sbjct: 93 LLVDPHTDEVFAKLLLTPVMDGHGHEQEAP----PEVPAEDDDGYNVVSFVKILTQSDCN 148
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
+ GF V LP L + P+Q+L+ D+ G W++ HI+RG+ +RHL + GW+
Sbjct: 149 SGCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRGKSKRHLFSRGWT 208
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVG 225
+FV +K+LVAGD+FVF++ L +
Sbjct: 209 SFVNNKKLVAGDSFVFIKNSAWWLMLN 235
>gi|304308173|gb|ADL70399.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 192
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 94/156 (60%), Gaps = 22/156 (14%)
Query: 473 GCWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMA 531
C LFG DL +A P ++++ + S + S D ++S
Sbjct: 58 SCRLFGFDLTSKPASATIPHDKQLI---SVDSNISDSTTKCQDPNSSN------------ 102
Query: 532 DVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR 591
S KE Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L
Sbjct: 103 --SPKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS 156
Query: 592 PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 627
P+DKWA+VFTDDEGD ML GDD W EFCKM KK+FI
Sbjct: 157 PKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFI 192
>gi|304308169|gb|ADL70397.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 90/151 (59%), Gaps = 22/151 (14%)
Query: 474 CWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMAD 532
C LFG DL +A P ++++ + S + S D ++S
Sbjct: 59 CRLFGFDLTSKPASATIPHDKQLI---SVDSNISDSTTKCQDPNSSN------------- 102
Query: 533 VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
S KE Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P
Sbjct: 103 -SPKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSP 157
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
+DKWA+VFTDDEGD ML GDD W EFCKM K
Sbjct: 158 KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|304308163|gb|ADL70394.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 90/151 (59%), Gaps = 22/151 (14%)
Query: 474 CWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMAD 532
C LFG DL +A P ++++ + S + S D ++S
Sbjct: 59 CRLFGFDLTSKPASATIPHDKQLI---SVDSNISDSTTKCQDPNSSN------------- 102
Query: 533 VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
S KE Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P
Sbjct: 103 -SPKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSP 157
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
+DKWA+VFTDDEGD ML GDD W EFCKM K
Sbjct: 158 KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|298112255|gb|ADB96374.2| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 98/172 (56%), Gaps = 24/172 (13%)
Query: 452 RPGNTVIHEEVERGKKSEASL--GCWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGS 508
R N + V + K +EA + C LFG DL +A P ++++ + S + S
Sbjct: 35 RNSNKSVFSSVLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLI---SVDSNISDS 91
Query: 509 ARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLT 568
D ++S S KE Q STR+R KVQMQG AVGRAVDLT
Sbjct: 92 TTKCQDPNSSN--------------SPKE----QKQQTSTRSRIKVQMQGTAVGRAVDLT 133
Query: 569 ALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCK 620
L+ YD+L ELEKMFEI+G+L P+DKWA+VFTDDEGD ML GDD W EFCK
Sbjct: 134 LLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCK 185
>gi|304308179|gb|ADL70402.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 187
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 22/149 (14%)
Query: 474 CWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMAD 532
C LFG DL +A P ++++ + S + S D ++S
Sbjct: 59 CRLFGFDLTSKPASATIPHDKQLI---SVDSNISDSTTKCQDPNSSN------------- 102
Query: 533 VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
S KE Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P
Sbjct: 103 -SPKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSP 157
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKM 621
+DKWA+VFTDDEGD ML GDD W EFCKM
Sbjct: 158 KDKWAIVFTDDEGDRMLVGDDPWNEFCKM 186
>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
Length = 152
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 73/102 (71%)
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SF K LT SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG
Sbjct: 11 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 70
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+RR
Sbjct: 71 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRR 112
>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 144/353 (40%), Gaps = 111/353 (31%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V +P RV YFPQGH E A N + + +P +LCRV ++
Sbjct: 18 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH--AYGNVDFGNPR----IPPLVLCRVSAVK 71
Query: 86 LLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSV 145
LA+ E+DE PE P SF K LT SD + +GG
Sbjct: 72 YLADPESDEA----------------------PEKPA----SFAKTLTQSD-ANNGG--- 101
Query: 146 LRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
GWS FV K
Sbjct: 102 --------------------------------------------------GWSNFVNKKN 111
Query: 206 LVAGDAFVFLRGENGELRVGVRR-------------LAHQQSSMPSSVISSQSMHLGVLA 252
LVAGD+ VFLR ENG+L VG+RR + + P S+
Sbjct: 112 LVAGDSIVFLRAENGDLCVGIRRAKRAGCGPEGYSGFLREDENRPILTHSNAGFRGKGRV 171
Query: 253 TAAHAVKTSTL------FIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
A + +TL F++ Y PR S +F + + A+ + GM+FKM FE +D
Sbjct: 172 RAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVRAAMQIQWCPGMKFKMAFETDD 231
Query: 305 SPERR-FTGTI--VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
S F G I V V D +WP S WR L++ WDEP +Q +RV+PW +E
Sbjct: 232 SSRISWFMGNISSVHVND-PIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLVE 283
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M+ VGR +DL+ L Y++L+ +L MF I+ R V++ D+ G + GD
Sbjct: 504 KVFMESEDVGRTLDLSILGSYEELYRKLANMFGIE---RAEMLSNVLYRDEAGIVKHIGD 560
Query: 613 DQWPEFCKMVKKIFIYS 629
+ EF K +++ I +
Sbjct: 561 APFGEFLKTARRLTILA 577
>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 73/102 (71%)
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SF K LT SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+RR
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRR 103
>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 73/102 (71%)
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SF K LT SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+RR
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRR 103
>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 73/102 (71%)
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SF K LT SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+RR
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRR 103
>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
Length = 135
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 73/102 (71%)
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SF K LT SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+RR
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRR 103
>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
Length = 138
Score = 130 bits (326), Expect = 3e-27, Method: Composition-based stats.
Identities = 61/102 (59%), Positives = 73/102 (71%)
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SF K LT SD + GGFSV R A P LD T P Q + AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+RR
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRR 103
>gi|304308157|gb|ADL70391.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308165|gb|ADL70395.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308167|gb|ADL70396.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 88/148 (59%), Gaps = 22/148 (14%)
Query: 474 CWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMAD 532
C LFG DL +A P ++++ + S + S D ++S
Sbjct: 59 CRLFGFDLTSKPASATIPHDKQLI---SVDSNISDSTTKCQDPNSSN------------- 102
Query: 533 VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
S KE Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P
Sbjct: 103 -SPKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSP 157
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCK 620
+DKWA+VFTDDEGD ML GDD W EFCK
Sbjct: 158 KDKWAIVFTDDEGDRMLVGDDPWNEFCK 185
>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
gi|223949733|gb|ACN28950.1| unknown [Zea mays]
gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
Length = 446
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 162/360 (45%), Gaps = 40/360 (11%)
Query: 12 LSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF 71
L G G + R++W ACA P +P G+ VYYFP GHIEQ + + L Q+
Sbjct: 7 LPPADGVGDNTVDRDVWLACAAPFSRIPTVGDEVYYFPDGHIEQHQHLSAAPLPAQD--- 63
Query: 72 DLPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR------SPDQCLPEP-PKQT 124
+ C V + L + +TDEV+A+I+L P + S + P P P Q
Sbjct: 64 ----RFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPAPGPPQK 119
Query: 125 VHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLA----TPTQELAAKDLHGYEWRF 180
+ F K L+ +D + +H +P ++ A Q++ +D G WRF
Sbjct: 120 LRYFTKDLSQTDVYAKFRIPLENEHVLP-IPKVETDGADQQRVQRQDVVMRDTRGKSWRF 178
Query: 181 KHIFRGQP-RRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSS 239
+R P + H L TGW F +KRL AGD VF+R NG+L VGVRRL H P
Sbjct: 179 SETYRVNPSKEHSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRL-HVPRYRPFD 237
Query: 240 V--ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMR 295
+ M LA A F V Y PR + +FI+ ++ +A+ + G
Sbjct: 238 FQGPAQDVMEAVRLAAAGRP------FTVTYFPRQAAVEFIVPRSEVDDALATSWEPGAV 291
Query: 296 FKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQW--DEPATVQRPERVSPWEI 353
+M +++ R+ T + G + Q + WR L+I W D P R V+ W++
Sbjct: 292 VRMEVMEDEN--RQHTVWVHGRVNAIRQ---NIWRMLEIIWGVDPPLATTR--SVNAWQV 344
>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 76/110 (69%), Gaps = 7/110 (6%)
Query: 91 ETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDTSTHGGFSVL 146
ETDEVYAQ+TL P + Q + D LP P KQ + FCK L ASDTSTHGGFSV
Sbjct: 96 ETDEVYAQMTLQPLSPQEQK---DAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVP 152
Query: 147 RKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
R+ A + PPLD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTG
Sbjct: 153 RRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 202
>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
Query: 91 ETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDTSTHGGFSVL 146
ETDEVYAQ+TL P + Q + D LP P KQ + FCK L ASDTSTHGGFSV
Sbjct: 69 ETDEVYAQMTLQPLSPQEQK---DAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVP 125
Query: 147 RKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
R+ A + P LD + P QEL A+DLH EW+F+HIFRGQP+RHLLTTG+
Sbjct: 126 RRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176
>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
Length = 454
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFD 516
I EE + ++ C LFGI L +N N D T A +
Sbjct: 236 TIQEETAKSREG----NCRLFGIPLTNNMNG--------TDSTMSQKNNLNDAAGLTQIA 283
Query: 517 ASQNQDLKEVKRGMADVSRKETQNK------------QGSAASTRTRTKVQMQGIAVGRA 564
+ + QDL + +G + Q + Q S+R+ TKV QGIA+GR+
Sbjct: 284 SPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRS 343
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
VDL+ + Y++L EL+++FE G+L P+ W +V+TD+E DMML GDD W EFC MV+
Sbjct: 344 VDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVR 403
Query: 624 KIFIYSTEEVKNM---ATSSKPIASSVEGEGT 652
KIFIY+ EEV+ M S + +V GEG+
Sbjct: 404 KIFIYTKEEVRKMNQGTLSCRSEEEAVVGEGS 435
>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
Length = 454
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 28/212 (13%)
Query: 457 VIHEEVERGKKSEASLGCWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFD 516
I EE + ++ C LFGI L +N N D T A +
Sbjct: 236 TIQEETAKSREG----NCRLFGIPLTNNMNG--------TDSTMSQRNNLNDAAGLTQIA 283
Query: 517 ASQNQDLKEVKRGMADVSRKETQNK------------QGSAASTRTRTKVQMQGIAVGRA 564
+ + QDL + +G + Q + Q S+R+ TKV QGIA+GR+
Sbjct: 284 SPKVQDLSDQSKGSKSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRS 343
Query: 565 VDLTALKGYDDLFDELEKMFEIQGQLR-PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVK 623
VDL+ + Y++L EL+++FE G+L P+ W +V+TD+E DMML GDD W EFC MV+
Sbjct: 344 VDLSKFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVR 403
Query: 624 KIFIYSTEEVKNM---ATSSKPIASSVEGEGT 652
KIFIY+ EEV+ M S + +V GEG+
Sbjct: 404 KIFIYTKEEVRKMNPGTLSCRSEEEAVVGEGS 435
>gi|284811273|gb|ADB96375.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811275|gb|ADB96376.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811277|gb|ADB96377.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308159|gb|ADL70392.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308161|gb|ADL70393.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308175|gb|ADL70400.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308181|gb|ADL70403.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 183
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 86/146 (58%), Gaps = 22/146 (15%)
Query: 474 CWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMAD 532
C LFG DL +A P ++++ + S + S D ++S
Sbjct: 59 CRLFGFDLTSKPASATIPHDKQLI---SVDSNISDSTTKCQDPNSSN------------- 102
Query: 533 VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
S KE Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P
Sbjct: 103 -SPKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSP 157
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEF 618
+DKWA+VFTDDEGD ML GDD W EF
Sbjct: 158 KDKWAIVFTDDEGDRMLVGDDPWNEF 183
>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
Length = 450
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-P 592
S KET N+ S STR+ TKV QG A+GRAVDLT +GY +L ELE+MF I+G+L P
Sbjct: 305 SSKETHNRPQSN-STRSCTKVHKQGSALGRAVDLTKFEGYTELIRELEQMFNIEGELEDP 363
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
W VV+TD+EGDMML GDD W EFC +V+KI+IY+ EEV+ M
Sbjct: 364 NKGWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIYIYTREEVEKM 407
>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
Length = 273
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 111/222 (50%), Gaps = 25/222 (11%)
Query: 127 SFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG 186
SF K+LTASD + FSVL A P LD +L TP Q + +D+HG EW F HI+RG
Sbjct: 56 SFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEWMFCHIWRG 115
Query: 187 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR----LAHQQSSMPSSVIS 242
P+RHLLT GW+ FV +K+L GD+ VF+R E+ ++ VG+RR Q + +
Sbjct: 116 SPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQGNGGGPAGA 175
Query: 243 SQSMHLGVLAT-----AAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMR 295
G ++T AA F V Y P +S+F + + E++
Sbjct: 176 VVGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVAAVKESM--------- 226
Query: 296 FKMRFEGEDSPERR---FTGTIVGV-GDFSEQWPGSKWRSLK 333
+M FE E+S + F GTI V WP S WR LK
Sbjct: 227 -QMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267
>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
Length = 418
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 154/336 (45%), Gaps = 34/336 (10%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
G + R++W ACA P +P G+ V YFP GHIEQ ++ Q L Q +
Sbjct: 55 GDNTVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQH-------RFH 107
Query: 79 CRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK-----QTVHSFCKILT 133
C V + L + +TDEV+A+I+L P + P Q + F K L+
Sbjct: 108 CTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELS 167
Query: 134 ASDTSTHGGFSVLRKHATECLP-PLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP-RRH 191
+D + +H LP P+ T Q++ +D G WRF + P ++H
Sbjct: 168 QTDVYARFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQH 224
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSM-----PSSVISSQSM 246
LTTGW F +KRL AGD VF+R NG+L VGVRRL + + P +Q +
Sbjct: 225 SLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDV 284
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
V AA F V Y PR + +FI+ ++ +A+ + G +M ++
Sbjct: 285 MEAVRLAAA-----GRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRMEVMEDE 339
Query: 305 SPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPA 340
+ R++T +VG + Q + WR L+I W P+
Sbjct: 340 N--RQYTMWVVGRVEAIRQ---NIWRMLEIIWGVPS 370
>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
gi|194689238|gb|ACF78703.1| unknown [Zea mays]
Length = 430
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 154/336 (45%), Gaps = 34/336 (10%)
Query: 19 GSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKIL 78
G + R++W ACA P +P G+ V YFP GHIEQ ++ Q L Q +
Sbjct: 55 GDNTVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQH-------RFH 107
Query: 79 CRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK-----QTVHSFCKILT 133
C V + L + +TDEV+A+I+L P + P Q + F K L+
Sbjct: 108 CTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELS 167
Query: 134 ASDTSTHGGFSVLRKHATECLP-PLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP-RRH 191
+D + +H LP P+ T Q++ +D G WRF + P ++H
Sbjct: 168 QTDVYARFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQH 224
Query: 192 LLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSM-----PSSVISSQSM 246
LTTGW F +KRL AGD VF+R NG+L VGVRRL + + P +Q +
Sbjct: 225 SLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDV 284
Query: 247 HLGVLATAAHAVKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
V AA F V Y PR + +FI+ ++ +A+ + G +M ++
Sbjct: 285 MEAVRLAAA-----GRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRMEVMEDE 339
Query: 305 SPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPA 340
+ R++T +VG + Q + WR L+I W P+
Sbjct: 340 N--RQYTMWVVGRVEAIRQ---NIWRMLEIIWGVPS 370
>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
Length = 627
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 153/349 (43%), Gaps = 37/349 (10%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
+LW ACAG +V++P +VYYFPQGH E + E P +P+ +LCRV +
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEF----PGGRVPALVLCRVAGVR 78
Query: 86 LLAEQETDEVYAQITLHPETDQTE-------PRSPDQCLPEPPKQTVHSFCKILTASDTS 138
+A+ +TDEV+A+I L P + ++ SF K LT SD +
Sbjct: 79 FMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDAN 138
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
GG V +K L D + T+ DL R K G P
Sbjct: 139 NGGGTFVNQKK----LVAGDSIVFMRTEN---GDLCVGIRRAKKGGVGGPEFLPPPPPPP 191
Query: 199 TFVTSKRLVAGDAFVFLRG-ENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHA 257
+ G +FLRG ++G R + P V+ + ++ A
Sbjct: 192 PPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANL----------A 241
Query: 258 VKTSTLFIVYYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI 314
V +VYY PR S +F + A+ + GMRFKM FE EDS F GT+
Sbjct: 242 VSGQPFEVVYY-PRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTV 300
Query: 315 --VGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
V V D +WP S WR L++ WDEP +Q +RVSPW +E V++ P
Sbjct: 301 SAVQVAD-PIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVE-LVSNMP 347
>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
Length = 180
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
Query: 1 MAYVEPNFGCSLSSQGGPGSGDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEAST 60
M E N G S+ G DLY ELWKACAGPLVEVP +GERV+YFPQGH+EQLE ST
Sbjct: 1 MTLYEENPG---ESRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEEST 57
Query: 61 NQELTHQEPLFDLPSKILCRVVHIELLA 88
NQEL HQ P FDLP KILCRVV+I LL
Sbjct: 58 NQELNHQIPHFDLPPKILCRVVNIRLLV 85
>gi|284811269|gb|ADB96373.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308171|gb|ADL70398.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308177|gb|ADL70401.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 180
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 84/143 (58%), Gaps = 22/143 (15%)
Query: 474 CWLFGIDLKHNSNTAA-PLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMAD 532
C LFG DL +A P ++++ + S + S D ++S
Sbjct: 59 CRLFGFDLTSKPASATIPHDKQLI---SVDSNISDSTTKCQDPNSSN------------- 102
Query: 533 VSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP 592
S KE Q STR+R KVQMQG AVGRAVDLT L+ YD+L ELEKMFEI+G+L P
Sbjct: 103 -SPKE----QKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSP 157
Query: 593 RDKWAVVFTDDEGDMMLAGDDQW 615
+DKWA+VFTDDEGD ML GDD W
Sbjct: 158 KDKWAIVFTDDEGDRMLVGDDPW 180
>gi|291196877|emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
Length = 478
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 474 CWLFGIDLKHNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADV 533
C LFG L PL + +DP + + S F S E ++ ++
Sbjct: 274 CRLFGFSLTEE----PPLSNEAMDPAHVSLSSNDDFNSKSSFQPSTWTVSCETQQKQSE- 328
Query: 534 SRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-P 592
S+ + NK + R+ TKV QG VGRA++L+ +GYDDL ELE++F ++G L P
Sbjct: 329 SKSQCLNK----TANRSCTKVHKQGSMVGRAINLSKFEGYDDLISELERLFNMEGLLNDP 384
Query: 593 RDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+ W VV+TD + DMML GDD W EFC +V KI IY+ +EV+ M
Sbjct: 385 KKGWQVVYTDSDDDMMLVGDDPWQEFCNIVSKILIYTHDEVEKM 428
>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 379
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 76/112 (67%), Gaps = 8/112 (7%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDD 603
STR+ KV QG+A+GR+VDLT GY +L EL++MF+ G+L+ K W VV+TD
Sbjct: 242 GGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKEWMVVYTDY 301
Query: 604 EGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM---ATSSKP----IASSVE 648
EGDMML GDD W EFC MV KIF+Y+ EEV+ M A +S+P +A+S E
Sbjct: 302 EGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSGLANSTE 353
>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 186
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 11 SLSSQGGPGSGD-LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEP 69
++++ P GD LY ELW ACA PLV PR G+ V+YFPQGHIEQ+EAS NQ +Q
Sbjct: 5 AMATPQAPSVGDPLYDELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMR 64
Query: 70 LFDLPSKILCRVVHIELLAEQETDEVYAQITLHPETD 106
L+DLP K+LCRV++IEL AE + D+VYAQ+ L E +
Sbjct: 65 LYDLPPKLLCRVINIELKAEADIDKVYAQVILMLELE 101
>gi|357472329|ref|XP_003606449.1| Auxin response factor [Medicago truncatula]
gi|355507504|gb|AES88646.1| Auxin response factor [Medicago truncatula]
Length = 361
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-W 596
+QN Q +A R+ TKV QG VGRA+DL+ L GY+DL ELEK+F ++G LR DK W
Sbjct: 223 SQNLQNTAK--RSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGW 280
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
+++TD E D+M+ GDD W EFC +V KI IY+ EEV+ M
Sbjct: 281 RILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKM 320
>gi|304308125|gb|ADL70375.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 132/251 (52%), Gaps = 28/251 (11%)
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA- 368
++GT++GV D S W SKWR L++ WDEPA++ RP +VSPWEIEPFV+S N+ +
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVSSE--NIPKSVM 58
Query: 369 VKSKRPR------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
+K+KRPR ++D+ +AS W TQ H+ Q T SS Q R +
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAK 117
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
S +NN+ + + VA S L N + VE+ KK E + LFGIDL
Sbjct: 118 KSDWLNNSYSVSN--VAKDSTL----------NDQMVSPVEQ-KKPETTANYRLFGIDL- 163
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQ 542
+S+ A P + P + K + + SD + ++ +E K+ A+ S KE Q+KQ
Sbjct: 164 MSSSLAVPEEKTA--PMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQ 221
Query: 543 GSAASTRTRTK 553
S STR+RTK
Sbjct: 222 SS--STRSRTK 230
>gi|304308109|gb|ADL70367.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 131/251 (52%), Gaps = 28/251 (11%)
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA- 368
++GT++GV D S W SKWR L++ WDEPAT+ RP +VSPWEIEPFV S N+ +
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPATISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 369 VKSKRPR------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
+K+KRPR ++D+ +AS W TQ H+ Q T SS Q R +
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAK 117
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
S +NN+ + + VA S L N + VE+ KK E + LFGIDL
Sbjct: 118 KSDWLNNSYSVSN--VAKDSTL----------NDQMVSPVEQ-KKPETTANYRLFGIDL- 163
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQ 542
+S+ A P + P + K + + SD + ++ +E K+ A+ S KE Q+KQ
Sbjct: 164 MSSSLAVPEEKTA--PMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQ 221
Query: 543 GSAASTRTRTK 553
S STR+RTK
Sbjct: 222 SS--STRSRTK 230
>gi|284811249|gb|ADB96363.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811251|gb|ADB96364.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811253|gb|ADB96365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811257|gb|ADB96367.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308107|gb|ADL70366.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308111|gb|ADL70368.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308113|gb|ADL70369.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308115|gb|ADL70370.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308117|gb|ADL70371.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308119|gb|ADL70372.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308121|gb|ADL70373.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308123|gb|ADL70374.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308129|gb|ADL70377.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 131/251 (52%), Gaps = 28/251 (11%)
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA- 368
++GT++GV D S W SKWR L++ WDEPA++ RP +VSPWEIEPFV S N+ +
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 369 VKSKRPR------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
+K+KRPR ++D+ +AS W TQ H+ Q T SS Q R +
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAK 117
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
S +NN+ + + VA S L N + VE+ KK E + LFGIDL
Sbjct: 118 KSDWLNNSYSVSN--VAKDSTL----------NDQMVSPVEQ-KKPETTANYRLFGIDL- 163
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQ 542
+S+ A P + P + K + + SD + ++ +E K+ A+ S KE Q+KQ
Sbjct: 164 MSSSLAVPEEKTA--PMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQ 221
Query: 543 GSAASTRTRTK 553
S STR+RTK
Sbjct: 222 SS--STRSRTK 230
>gi|284811255|gb|ADB96366.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 131/251 (52%), Gaps = 28/251 (11%)
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA- 368
++GT++GV D S W SKWR L++ WDEPA++ RP +VSPWE EPFV+S N+ +
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWETEPFVSSE--NIPKSVM 58
Query: 369 VKSKRPR------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
+K+KRPR ++D+ +AS W TQ H+ Q T SS Q R +
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAK 117
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
S +NN+ + + VA S L N + VE+ KK E + LFGIDL
Sbjct: 118 KSDWLNNSYSVSN--VAKDSTL----------NDQMVSPVEQ-KKPETTANYRLFGIDL- 163
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQ 542
+S+ A P + P + K + + SD + ++ +E K+ A+ S KE Q+KQ
Sbjct: 164 MSSSLAVPEEKTA--PMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQ 221
Query: 543 GSAASTRTRTK 553
S STR+RTK
Sbjct: 222 SS--STRSRTK 230
>gi|304308105|gb|ADL70365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308127|gb|ADL70376.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 130/251 (51%), Gaps = 28/251 (11%)
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPA- 368
++GT++GV D S W SKWR L++ WDEPA+ RP +VSPWEIEPFV S N+ +
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASTSRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 369 VKSKRPR------SIDIPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEI 422
+K+KRPR ++D+ +AS W TQ H+ Q T SS Q R +
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSC-ITSQWSSPQQCHRDANEDAK 117
Query: 423 DSTIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKKSEASLGCWLFGIDLK 482
S +NN+ + + VA S L N + VE+ KK E + LFGIDL
Sbjct: 118 KSDWLNNSYSVSN--VAKDSTL----------NDQMVSPVEQ-KKPETTANYRLFGIDL- 163
Query: 483 HNSNTAAPLGRKVVDPTTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQ 542
+S+ A P + P + K + + SD + ++ +E K+ A+ S KE Q+KQ
Sbjct: 164 MSSSLAVPEEKTA--PMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSPKEVQSKQ 221
Query: 543 GSAASTRTRTK 553
S STR+RTK
Sbjct: 222 SS--STRSRTK 230
>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
Length = 139
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 9/121 (7%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD-LPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ P + LP +++C++
Sbjct: 22 LNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQL 81
Query: 82 VHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE-----PPKQTVHSFCKILTASD 136
++ + A+ ETDEVYAQ+TL P + Q + D CL P KQ + FCK LTASD
Sbjct: 82 HNLTMHADVETDEVYAQMTLQPLSPQEQ---KDVCLLPAELGIPSKQPTNYFCKTLTASD 138
Query: 137 T 137
T
Sbjct: 139 T 139
>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
Length = 431
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PRDKW 596
T++ S AS R+ TKV G AVGR++DL+ L GY DL ELE++F ++G L P W
Sbjct: 303 TEDNFLSNASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGW 362
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 639
VV+TD+E DM+L GDD W EFC +V KI I + ++V+NM+ S
Sbjct: 363 RVVYTDNENDMVLVGDDPWQEFCDVVCKILICTQDDVENMSPS 405
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 309 RFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQP 367
R +G I G+GD +WP SKWR L ++WDE + RVSPWEIEP V LN+ P
Sbjct: 1 RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLPPALNV--P 58
Query: 368 AVKSKRPRSIDIPASAS 384
+K RP +P+ A+
Sbjct: 59 RLKKLRP---SLPSGAA 72
>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
Length = 496
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 97/170 (57%), Gaps = 24/170 (14%)
Query: 216 RGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS-- 273
R E +L +G+R + Q+ MPS V+SS SMH+ +LA AHA T++ F +++ PR S
Sbjct: 225 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 284
Query: 274 QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRS 331
+F+I L+KY++A+ H SVGMRF+M FE E+S RR+ GTI V D +WP S WRS
Sbjct: 285 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 344
Query: 332 LK-------IQW--DEP--ATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
+K QW +EP TV V W++ L QP V+
Sbjct: 345 VKGDQGVNATQWLHNEPILVTVSGDGSVGMWDV---------TLGQPCVR 385
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 82/123 (66%), Gaps = 4/123 (3%)
Query: 216 RGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTS-- 273
R E +L +G+R + Q+ MPS V+SS SMH+ +LA AHA T++ F +++ PR S
Sbjct: 21 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 80
Query: 274 QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRS 331
+F+I L+KY++A+ H SVGMRF+M FE E+S RR+ GTI V D +WP S WRS
Sbjct: 81 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 140
Query: 332 LKI 334
+K+
Sbjct: 141 VKV 143
>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 119
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 66/101 (65%), Gaps = 7/101 (6%)
Query: 99 ITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECL 154
+TL P + Q + D LP P KQ + FCK L ASDTSTHGGFSV R+ A +
Sbjct: 1 MTLQPLSPQEQK---DAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVF 57
Query: 155 PPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTT 195
P LD + P QEL A+DLH EW+F+HIFRGQP+RHLLTT
Sbjct: 58 PSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 98
>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--PPKQTVHSFCK 130
LPS++LC+V +I + A+++TDEVYAQ+ L P +T+ P Q L K FCK
Sbjct: 53 LPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETD-VFPIQSLGSYAKSKHPAEYFCK 111
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
LTASD STHGGFS+ R+ A + P LD ++ P QEL +DLH W F+HI+RG+
Sbjct: 112 NLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDNMWIFRHIYRGR 168
>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 203
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 117/242 (48%), Gaps = 56/242 (23%)
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
M GV+A+ +A KT +F V YKPR M+FEG+D
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 36
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++
Sbjct: 37 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 94
Query: 366 QPAVKSKRP-RSID-IPASASAFWYQGSTQSHDITQVVGATEGQSSESQVVRPMRQKEID 423
Q ++K K+ R ++ I A++S W I Q +G S P+ E
Sbjct: 95 QSSLKKKKHWRQLNEIGATSSNLW---------ICQEIGQRSMNS-------PISVPEFS 138
Query: 424 STIINNNSTDDHRIVAAQSVLSGYASSGRPGNTVIHEEVERGKK----SEASLGCWLFGI 479
N+ +D + + +L ++ P +++ + +K +EA+ C LFG+
Sbjct: 139 YP----NAVEDSKFPSG--LLLNHSLLAIPNENYNSDQMIQPRKEDITTEATTSCLLFGV 192
Query: 480 DL 481
DL
Sbjct: 193 DL 194
>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Query: 73 LPSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPE--PPKQTVHSFCK 130
LPS++LC+V +I + A+++TDEVYAQ+ L P +T P Q L K FCK
Sbjct: 53 LPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETN-VFPIQSLGSYAKSKHPAEYFCK 111
Query: 131 ILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
LTASD STHGGFS+ R+ A + P LD ++ P QEL +DLH W F+HI+RG+
Sbjct: 112 NLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDNMWIFRHIYRGR 168
>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
Length = 796
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 25/215 (11%)
Query: 23 LYRELWKACAGPLV-EVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKI-LCR 80
+ RE+W+ACA P +P G VYYFP GH +Q + P LP ++ LC+
Sbjct: 404 ITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQCPS---------RPPEPLPGRVFLCK 454
Query: 81 VVHIELLAEQETDEVYAQITLHP-ETDQT-EPRSPDQCLPEPP--KQTVHSFCKILTASD 136
V + L A + +E++A ++L P DQ +P++P P P K T+ SF K LT +D
Sbjct: 455 VTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSSPQVKTTLVSFVKPLTCTD 512
Query: 137 TSTHGGFSVL--RKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLT 194
+ ++ R+ A LP L + P L KD+HG EW + ++ H+L+
Sbjct: 513 AVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THMLS 567
Query: 195 TGWSTFVTSKRLVAGDAFVFLRG-ENGELRVGVRR 228
+GW F + RLV GD VF+R ++GE +G+RR
Sbjct: 568 SGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRR 602
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 92/221 (41%), Gaps = 22/221 (9%)
Query: 19 GSGDLYRELWKACAGPLV-EVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL---- 73
G G + R +W ACA P +P G V+YF GH EQ PL +
Sbjct: 12 GDGIVDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQF-------CQFPAPLLEQLAVP 64
Query: 74 -PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR----SPDQCLPEPPKQTVHSF 128
P LC V + L A+ T+E YA ITL P D PR +Q + F
Sbjct: 65 GPRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYF 124
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
K L +SD F+V A + PPL A Q L KDL G F + G
Sbjct: 125 VKTLMSSDAEYRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN- 181
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFL-RGENGELRVGVRR 228
R L W F V GD+ +F+ R ++ EL VGVRR
Sbjct: 182 -RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRR 221
>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
Length = 283
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 86/166 (51%), Gaps = 40/166 (24%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+ + LW C GPL+ +P G +V YFPQG+ EQ+ AST +E FD+P +
Sbjct: 13 INQALWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQKEAD-----FDIP------IS 61
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEP-RSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
H+ A+QE DEV+AQ+TL P + +P PD + KQT+ SF + LT
Sbjct: 62 HLH--ADQENDEVFAQMTLQPFSQTADPFLLPDFGIQT--KQTIVSFSRTLT-------- 109
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQ 187
D T P QEL A+DLH EWRF+HI+RG+
Sbjct: 110 ----------------DFTQTPPAQELVARDLHNIEWRFRHIYRGR 139
>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 30/144 (20%)
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
M GV+A+ +A KT +F V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+ N++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--NIS 93
Query: 366 QPAVKSKRP-RSID-IPASASAFW 387
Q ++K K+ R ++ I A +S W
Sbjct: 94 QSSLKKKKHWRQLNEIGAISSNLW 117
>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
Length = 728
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 158/355 (44%), Gaps = 47/355 (13%)
Query: 25 RELWKACAGPLVEV-PRNGERVYYFPQGHIEQLEASTNQELTH-QEPLFDLPSKILCRVV 82
R++W ACA P V P G VYY P GHIEQ L+ +P+ +P C V
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPDPIHPVP----CTVA 76
Query: 83 HIELLAEQETDEVYAQITLHPET-DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ L + E+ E YA I+L P + D T R + +P + F K L+ +D +++
Sbjct: 77 DLVLDVDAESGEAYATISLLPGSHDDTTAR---RQVPAHGEPGFRFFEKQLSPADVTSNA 133
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL-------T 194
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 134 --LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVNDN 191
Query: 195 TGWSTFVTSKRLVAGDAFVFLR------GENGELRVGVRRLAHQQSS-MPSSVISSQSMH 247
GW FV +KRL D VF+R +GEL VGVRR + P +
Sbjct: 192 DGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK-- 249
Query: 248 LGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLE---AVHHCFSVGMRFKMRFEG 302
V++ A++ T F V Y PR T +F++ ++Y+ + + F G +R
Sbjct: 250 --VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMN- 306
Query: 303 EDSPERRFTGTIVG-VGDFSEQWPGSKWRSLKIQWDE---PATVQRPERVSPWEI 353
+ +I G V F P WR L++ WD+ P + + +V+ W++
Sbjct: 307 ----PLQIAQSISGTVRTFDHLRP---WRMLEVDWDQAASPISYRIHRQVNSWQV 354
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 167 ELAAKDLHGYEWRFKHIFRGQP--RR---HLLTTGWSTFVTSKRLVAGDAFVFLRGE-NG 220
+L +L G W F H + RR H L GWS FV +KRL GD +F+R G
Sbjct: 473 DLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGG 532
Query: 221 ELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKP--RTSQFIIG 278
E VGVRR H MP + + A++A F V Y P T++F++
Sbjct: 533 EPLVGVRRKPH--GGMPVGIPDKHVADAWLDASSAQP------FRVTYCPWQGTAEFVVR 584
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG-VGDFSEQWPGSKWRSLKIQWD 337
+ + + G R ++ +D+ RR + G V D + S+WR L++ WD
Sbjct: 585 REEVEGS--PPLAPGTRVRLLMNPDDA-RRRSQPPVYGTVRDVHCR---SEWRMLEVDWD 638
Query: 338 E--PATVQRPERVSPWEIEPFVASAP 361
P RV+ W+++P + P
Sbjct: 639 RDSPLAPTMNRRVNSWQVQPVQLALP 664
>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
Length = 752
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 158/355 (44%), Gaps = 47/355 (13%)
Query: 25 RELWKACAGPLVEV-PRNGERVYYFPQGHIEQLEASTNQELTH-QEPLFDLPSKILCRVV 82
R++W ACA P V P G VYY P GHIEQ L+ +P+ +P C V
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPDPIHPVP----CTVA 76
Query: 83 HIELLAEQETDEVYAQITLHPET-DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ L + E+ E YA I+L P + D T R + +P + F K L+ +D +++
Sbjct: 77 DLVLDVDAESGEAYATISLLPGSHDDTTAR---RQVPAHGEPGFRFFEKQLSPADVTSNA 133
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLL-------T 194
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 134 --LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVNDN 191
Query: 195 TGWSTFVTSKRLVAGDAFVFLR------GENGELRVGVRRLAHQQSS-MPSSVISSQSMH 247
GW FV +KRL D VF+R +GEL VGVRR + P +
Sbjct: 192 DGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK-- 249
Query: 248 LGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLE---AVHHCFSVGMRFKMRFEG 302
V++ A++ T F V Y PR T +F++ ++Y+ + + F G +R
Sbjct: 250 --VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMN- 306
Query: 303 EDSPERRFTGTIVG-VGDFSEQWPGSKWRSLKIQWDE---PATVQRPERVSPWEI 353
+ +I G V F P WR L++ WD+ P + + +V+ W++
Sbjct: 307 ----PLQIAQSISGTVRTFDHLRP---WRMLEVDWDQAASPISYRIHRQVNSWQV 354
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 167 ELAAKDLHGYEWRFKHIFRGQP--RR---HLLTTGWSTFVTSKRLVAGDAFVFLRGE-NG 220
+L +L G W F H + RR H L GWS FV +KRL GD +F+R G
Sbjct: 497 DLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGG 556
Query: 221 ELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKP--RTSQFIIG 278
E VGVRR H MP + + A++A F V Y P T++F++
Sbjct: 557 EPLVGVRRKPH--GGMPVGIPDKHVADAWLDASSAQP------FRVTYCPWQGTAEFVVR 608
Query: 279 LNKYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG-VGDFSEQWPGSKWRSLKIQWD 337
+ + + G R ++ +D+ RR + G V D + S+WR L++ WD
Sbjct: 609 REEVEGS--PPLAPGTRVRLLMNPDDA-RRRSQPPVYGTVRDVHCR---SEWRMLEVDWD 662
Query: 338 E--PATVQRPERVSPWEIEPFVASAP 361
P RV+ W+++P + P
Sbjct: 663 RDSPLAPTMNRRVNSWQVQPVQLALP 688
>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 189
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 30/147 (20%)
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
+ M GV+A+ +A KT +F V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 303 EDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+D E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 363 NLAQPAVKSKRP-RSID-IPASASAFW 387
+++Q ++K K+ R ++ I A++S W
Sbjct: 93 DISQSSLKKKKHWRQLNEIGATSSNLW 119
>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 30/147 (20%)
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
+ M GV+A+ +A KT +F V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 303 EDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+D E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 363 NLAQPAVKSKRP--RSIDIPASASAFW 387
+++Q ++K K+ + +I A++S W
Sbjct: 93 DISQSSLKKKKHWLQLNEIGATSSNLW 119
>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
Length = 377
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 70/118 (59%), Gaps = 23/118 (19%)
Query: 122 KQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEW-RF 180
K+ H FCK LTASDTSTHGGFSV R+ A +C PPL+ W RF
Sbjct: 117 KRMSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRF 158
Query: 181 KHIFRGQPRRHLL----TTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQS 234
K R R +++ TTG S FV K+LV+ DA +FLRG+NGELR+GVRR A ++
Sbjct: 159 KECKRTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVRRAAQLKN 216
>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 187
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 30/144 (20%)
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
M GV+A+ +A KT +F V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 93
Query: 366 QPAVKSKRP-RSID-IPASASAFW 387
Q ++K K+ R ++ I A++S W
Sbjct: 94 QSSLKKKKHWRQLNEIGATSSNLW 117
>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 183
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 30/144 (20%)
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
M GV+A+ +A KT +F V YKPR M+FEG+D
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 36
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++
Sbjct: 37 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 94
Query: 366 QPAVKSKRP-RSID-IPASASAFW 387
Q ++K K+ R ++ I A++S W
Sbjct: 95 QSSLKKKKHWRQLNEIGATSSNLW 118
>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 80/144 (55%), Gaps = 30/144 (20%)
Query: 246 MHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDS 305
M GV+A+ +A KT +F V YKPR M+FEG D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGNDF 35
Query: 306 PERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLA 365
E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 93
Query: 366 QPAVKSKRP-RSID-IPASASAFW 387
Q ++K K+ R ++ I A++S W
Sbjct: 94 QSSLKKKKHWRQLNEIGATSSNLW 117
>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 176
Score = 99.0 bits (245), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 30/147 (20%)
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
+ M GV+A+ +A KT +F V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 303 EDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+D E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 363 NLAQPAVKSKRP-RSI-DIPASASAFW 387
N++Q ++K K+ R + +I A +S W
Sbjct: 93 NISQSSLKKKKHWRQLNEIGAISSNLW 119
>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 173
Score = 98.6 bits (244), Expect = 9e-18, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 30/147 (20%)
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
+ M GV+A+ +A KT +F V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 303 EDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+D E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 363 NLAQPAVKSKRP-RSI-DIPASASAFW 387
+++Q ++K K+ R + +I A++S W
Sbjct: 93 DISQSSLKKKKHWRQLNEIGATSSNLW 119
>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 30/147 (20%)
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
+ M GV+A+ +A KT +F V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 303 EDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+D E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +V PW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSS-- 92
Query: 363 NLAQPAVKSKRP-RSID-IPASASAFW 387
+++Q ++K K+ R ++ I A++S W
Sbjct: 93 DISQSSLKKKKHWRQLNEIGATSSNLW 119
>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 30/147 (20%)
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
+ M GV+A+ +A KT +F V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 303 EDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+D E+R+ GTI+GV D S W S+W+SLK+QWDE + RP +VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 363 NLAQPAVKS-KRPRSID-IPASASAFW 387
+++Q ++K K R ++ I A++S W
Sbjct: 93 DISQSSLKKEKHWRQLNEIGATSSNLW 119
>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 175
Score = 96.3 bits (238), Expect = 5e-17, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 30/147 (20%)
Query: 243 SQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEG 302
+ M GV+A+ +A KT +F V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 303 EDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPL 362
+D E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +V PW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSS-- 92
Query: 363 NLAQPAVKSKRP-RSI-DIPASASAFW 387
+++Q ++K K+ R + +I A++S W
Sbjct: 93 DISQSSLKKKKHWRQLNEIGATSSNLW 119
>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 180
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 30/140 (21%)
Query: 250 VLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR 309
V+A+ +A KT +F V YKPR M+FEG+D E+R
Sbjct: 1 VIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDFSEKR 34
Query: 310 FTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAV 369
+ GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S+ +++Q ++
Sbjct: 35 YDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSL 92
Query: 370 KSKRP-RSID-IPASASAFW 387
K K+ R ++ I A++S W
Sbjct: 93 KKKKHWRQLNEIGATSSNLW 112
>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 168
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 30/139 (21%)
Query: 251 LATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF 310
+A+ +A KT +F V YKPR M+FEG+D E+R+
Sbjct: 1 IASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDFSEKRY 34
Query: 311 TGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVK 370
GTI+GV D S W S+WRSLK+QWDE + RP +VSPW+IE + S L+++Q ++K
Sbjct: 35 DGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS--LDISQSSLK 92
Query: 371 SKRP-RSID-IPASASAFW 387
K+ R ++ I A++S W
Sbjct: 93 KKKHWRQLNEIGATSSNLW 111
>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
Length = 881
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 268 YKPRTS--QFIIGLNKYLEAVHHC-FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-Q 323
Y PRTS +F++ L KY +A + S+GMRF+M FE E+S RR+ GTI G+ D +
Sbjct: 2 YNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPVR 61
Query: 324 WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRP 374
WP S+WR+L++ WDE + RVS WEIE + P + P + KRP
Sbjct: 62 WPNSQWRNLQVGWDESGAGDKQNRVSIWEIE--TVATPFFICPPFFRLKRP 110
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVV 599
Q A RT TKV G VGR++D+T K Y +L EL +MF ++GQL K W +V
Sbjct: 764 QQPAPPMRTYTKVYKLG-NVGRSIDVTRYKNYGELRHELARMFGLEGQLEDPKKTGWQLV 822
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVE 648
F D E D++L GDD W EF V+ I I S +EV M+ I ++ +
Sbjct: 823 FVDHENDILLVGDDPWEEFVSCVRYIKILSPQEVLQMSQEGMDIVNNAD 871
>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
Length = 429
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 10/140 (7%)
Query: 250 VLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPE 307
+L+ A+++ ++F + + PR S+FI+ K+L+++++ FSVG RFK+ E ED+ E
Sbjct: 1 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANE 60
Query: 308 RRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQ 366
R F G I+G+ + WPGSKW+SL I+WD RVSPW+IE +S +
Sbjct: 61 RSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTHRL 119
Query: 367 PAVKSKR------PRSIDIP 380
+ SKR P +D P
Sbjct: 120 SSSVSKRTKLCFPPSDLDTP 139
>gi|449532340|ref|XP_004173140.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 78
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 583 MFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKP 642
MF+++GQL RDKW +V+TDDEGDMML GDD W EF MV++IFI S E+VKNM++ SK
Sbjct: 1 MFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGSKQ 60
Query: 643 IASSVEGEGTAIS 655
+ +S+E EG ++
Sbjct: 61 L-TSIEVEGDVVT 72
>gi|353441048|gb|AEQ94108.1| putative auxin response transcription factor 1 [Elaeis guineensis]
Length = 58
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/55 (76%), Positives = 48/55 (87%)
Query: 47 YFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIELLAEQETDEVYAQITL 101
YFPQGH+EQLEASTNQ L PLF+LPSKILCRVVH++L AE +TDEVYAQIT+
Sbjct: 2 YFPQGHMEQLEASTNQGLDQHMPLFNLPSKILCRVVHVQLRAEPDTDEVYAQITI 56
>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
Length = 722
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 157/362 (43%), Gaps = 54/362 (14%)
Query: 25 RELWKACAGPLVEV-PRNGERVYYFPQGHIEQLEASTNQELTH-QEPLFDLPSKILCRVV 82
R++W ACA P V P G VYY P GHIEQ L+ +P+ +P C V
Sbjct: 21 RDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPDPIHPVP----CTVA 76
Query: 83 HIELLAEQETDEVYAQITLHPET-DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
+ L + E+ E YA I+L P + D T R + +P + F K L+ +D +++
Sbjct: 77 DLVLDVDAESGEAYATISLLPGSHDDTTAR---RQVPAHGEPGFRFFEKQLSPADVTSNA 133
Query: 142 GFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRG-----QPRRHLL--- 193
VL A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 134 --LVLPAGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYMLGDL 191
Query: 194 ----TTGWSTFVTSKRLVAGDAFVFLR--------GENGELRVGVRRLAHQQSS-MPSSV 240
GW FV +KRL D VF+R +GEL VGVRR + P
Sbjct: 192 GVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHPRPG 251
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TSQFIIGLNKYLE---AVHHCFSVGMR 295
+ V++ ++ T F V Y PR T +F++ ++Y+ + + F G
Sbjct: 252 VEDNK----VVSEVWLEMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTT 307
Query: 296 FKMRFEGEDSPERRFTGTIVG-VGDFSEQWPGSKWRSLKIQWDE---PATVQRPERVSPW 351
+R + +I G V F P WR L++ WD+ P + + +V+ W
Sbjct: 308 VHLRMN-----PLQIAQSISGTVRTFDHLRP---WRMLEVDWDQAASPISYRIRRQVNSW 359
Query: 352 EI 353
++
Sbjct: 360 QV 361
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 34/204 (16%)
Query: 167 ELAAKDLHGYEWRFKHIFRGQP--RR---HLLTTGWSTFVTSKRLVAGDAFVFLRGE-NG 220
+L +L G W F H + RR H L GWS FV +KRL GD +F+R G
Sbjct: 480 DLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGG 539
Query: 221 ELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLN 280
E VGVRR H M +G+ V + L V T++F++
Sbjct: 540 EPIVGVRRKPH------------GGMLVGI---PDKHVADAWLDAV----GTAEFVVRRE 580
Query: 281 KYLEAVHHCFSVGMRFKMRFEGEDSPERRFTGTIVG-VGDFSEQWPGSKWRSLKIQWDE- 338
+ + + G R ++ +D RR + G V D + SKWR L++ WD
Sbjct: 581 EVEGS--PPLAPGTRVRLLMNPDDV-RRRSQPPVYGTVRDVHSR---SKWRMLEVDWDRD 634
Query: 339 -PATVQRPERVSPWEIEPFVASAP 361
P RV+ W+++P + P
Sbjct: 635 SPLAPTMNRRVNSWQVQPVQLALP 658
>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
Length = 541
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 25 RELWKACAGPLV-EVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKI-LCRVV 82
R++W ACA P +P G VYYFP GH EQ + QEPL P +I LC+V
Sbjct: 255 RDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRP------QEPL---PGRIFLCKVT 305
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEP----RSPDQCLPEPPKQTVHSFCKILTASDTS 138
+ L A T+E A I+L P D Q++ SF K LT +D
Sbjct: 306 DVRLGAAA-TNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTDV- 363
Query: 139 THGGFSVLRKHATE-CLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGW 197
T F V + A LP + + P L KDL G EW F + ++ R + GW
Sbjct: 364 TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRNGW 418
Query: 198 STFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
F + LV GD VF+R NGE+ + VRR
Sbjct: 419 MEFSNANGLVTGDNAVFMRRGNGEMFMAVRR 449
>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
Length = 407
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 156/405 (38%), Gaps = 43/405 (10%)
Query: 19 GSGDLYRELWKACAGPLV-EVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL---- 73
G G + R++W ACA P +P G V+YF GH Q PL +
Sbjct: 12 GDGIVDRDMWLACAAPNSGRLPAVGSVVFYFVDGHAAQF-------CQFPAPLLEQLAVP 64
Query: 74 -PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK----QTVHSF 128
P LC V + L A+ T+E YA+ITL P D PR P P Q + F
Sbjct: 65 GPRVFLCTVAAVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYF 124
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
K L SD FS A PPL A Q L KDLHG F + +G
Sbjct: 125 VKTLMISDFDFRIRFSAPMADAKGVFPPL--VDAKAVQPLLVKDLHGSPMTFDYGRKG-- 180
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFL-----RGENGELRVGVRRLAHQQSSMPSSV--- 240
+R L W F V GD+ +F+ ++GEL VGVRR + + +++
Sbjct: 181 KRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRY 240
Query: 241 ---ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMR 295
Q+ + AA F V Y+ R +F++ E + +
Sbjct: 241 RPPTPPQAAVQEAVLAAAGHAAAGERFTVAYRSRKDGDEFVVPREAVEEGLRARLTSLAE 300
Query: 296 FKMRFEGEDSPERRFTGTIVGV-GDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+ + ED IVG G + G WR+L+I WD + + W++
Sbjct: 301 VEFVWAVEDG-----APPIVGPRGKVTAIATGQLWRNLEIVWDGNSEMDMSANF--WQVR 353
Query: 355 PFVASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQ 399
P V ++ + P K + ID AS S G Q + Q
Sbjct: 354 P-VEEVDISPSTPPPKRLKNCEIDDTASTSVSVDNGDEQVPTMRQ 397
>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
Length = 585
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 25 RELWKACAGPLV-EVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKI-LCRVV 82
R++W ACA P +P G VYYFP GH EQ + QEPL P +I LC+V
Sbjct: 278 RDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRP------QEPL---PGRIFLCKVT 328
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEP----RSPDQCLPEPPKQTVHSFCKILTASDTS 138
+ L A T+E A I+L P D Q++ SF K LT +D +
Sbjct: 329 DVRLGAA-ATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTDVT 387
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
+ A LP + + P L KDL G EW F + ++ R + GW
Sbjct: 388 KNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRNGWM 442
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
F + LV GD VF+R NGE+ + VRR
Sbjct: 443 EFSNANGLVTGDNAVFMRRGNGEMFMAVRR 472
>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
Length = 170
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 97/198 (48%), Gaps = 45/198 (22%)
Query: 104 ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLAT 163
+ +Q E P + L P KQ + FCK LTAS
Sbjct: 4 QQEQKEAYLPAE-LGTPSKQPTNYFCKTLTASQV-------------------------- 36
Query: 164 PTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFL-------R 216
TQ L D R K F RHLLTTGWS FV++K LVAGD+ +F R
Sbjct: 37 -TQALTG-DCLCLVGRLKKCFL---LRHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNR 91
Query: 217 GENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQ 274
E +L G+R Q+ MPSSV+S+ S+HLG+LA AHA T++ F ++Y PR S+
Sbjct: 92 NEKNQLLFGIRHAIWPQTVMPSSVLSTDSLHLGLLAAVAHAAATNSPFTIFYNPRACPSE 151
Query: 275 FIIG----LNKYLEAVHH 288
F+I + +Y++ V+H
Sbjct: 152 FVIPSLSIMLEYVKVVYH 169
>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 109
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 99 ITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECL 154
+TL P + Q + D LP P KQ + FCK L ASDTSTHGGFSV R+ A +
Sbjct: 1 MTLQPLSPQEQK---DAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVF 57
Query: 155 PPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
PPLD + P QEL A+DLH EW+F+HIFR
Sbjct: 58 PPLDFSQQPPAQELIARDLHDNEWKFRHIFR 88
>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
Os07g0183300/Os07g0183600
gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
Length = 762
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 92/221 (41%), Gaps = 22/221 (9%)
Query: 19 GSGDLYRELWKACAGPLV-EVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL---- 73
G G + R +W ACA P +P G V+YF GH EQ PL +
Sbjct: 12 GDGIVDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQF-------CQFPAPLLEQLAVP 64
Query: 74 -PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR----SPDQCLPEPPKQTVHSF 128
P LC V + L A+ T+E YA ITL P D PR +Q + F
Sbjct: 65 GPRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYF 124
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
K L +SD F+V A + PPL A Q L KDL G F + G
Sbjct: 125 VKTLMSSDAEYRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN- 181
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFL-RGENGELRVGVRR 228
R L W F V GD+ +F+ R ++ EL VGVRR
Sbjct: 182 -RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRR 221
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 34/311 (10%)
Query: 73 LPSKI-LCRVVHIELLAEQETDEVYAQITLHP-ETDQT-EPRSPDQCLPEPPK--QTVHS 127
LP ++ LC+V + L A + +E++A ++L P DQ +P++P P P+ T+ S
Sbjct: 384 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSSPQVQTTLVS 441
Query: 128 FCKILTASDTSTHGGFSVL--RKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
F K LT +D + ++ R+ A LP L + P L KD+HG EW + ++
Sbjct: 442 FVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWK 498
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG-ENGELRVGVRRLAHQQSSMPSSVISSQ 244
H+L++GW F + RLV GD VF+R ++GE +G+RR + P SV
Sbjct: 499 EY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPE---PVSVDE-- 551
Query: 245 SMHLGVLATAAHAVKTSTLFIVYY-KPRTSQFIIGLNKYLEAVHHCFSVGM--RFKMRFE 301
V+ A + + Y + +F++ A+ F+ GM F E
Sbjct: 552 -----VIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVWAVE 606
Query: 302 GEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
+ P G ++ + E + S WR ++++W A + R V+ W+I + +
Sbjct: 607 EDRLPNVGPQGKVIAI----ENYATSIWRMIQVEWPSCAGMNR--YVNFWQIREVLGESS 660
Query: 362 LNLAQPAVKSK 372
+ V+S+
Sbjct: 661 FEASTCIVRSQ 671
>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
Length = 407
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 155/405 (38%), Gaps = 43/405 (10%)
Query: 19 GSGDLYRELWKACAGPLV-EVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDL---- 73
G G + R +W ACA P +P G V+YF GH Q PL +
Sbjct: 12 GDGIVDRAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQF-------CQFPAPLLEQLAVP 64
Query: 74 -PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK----QTVHSF 128
P LC V + L A+ T+E YA+ITL P D PR P P Q + F
Sbjct: 65 GPRVFLCTVAAVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGGQQLRYF 124
Query: 129 CKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQP 188
K L SD FS A PPL A Q L KDLHG F + +G
Sbjct: 125 VKTLMISDFDFRIRFSAPMADAKGVFPPL--VDAKAVQPLLVKDLHGSPMTFDYGRKG-- 180
Query: 189 RRHLLTTGWSTFVTSKRLVAGDAFVFL-----RGENGELRVGVRRLAHQQSSMPSSV--- 240
+R L W F V GD+ +F+ ++GEL VGVRR + + +++
Sbjct: 181 KRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRY 240
Query: 241 ---ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQFIIGLNKYLEAVHHCFSVGMR 295
Q+ + AA F V Y+ R +F++ E + +
Sbjct: 241 RPPTPPQAAVQEAVLAAAGHAAAGERFTVAYRSRQDGDEFVVPREAVEEGLRARLTSLAE 300
Query: 296 FKMRFEGEDSPERRFTGTIVGV-GDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIE 354
+ + ED IVG G + G WR+L+I WD + + W++
Sbjct: 301 VEFVWAVEDG-----APPIVGPRGKVTAIATGQLWRNLEIVWDGNSEMDMSANF--WQVR 353
Query: 355 PFVASAPLNLAQPAVKSKRPRSIDIPASASAFWYQGSTQSHDITQ 399
P V ++ + P K + ID AS S G Q + Q
Sbjct: 354 P-VEEVDISPSTPPPKRLKNCEIDDTASTSVSVDNGDEQVPTMRQ 397
>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 169
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 290 FSVGMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVS 349
F+V + +M+FEG+D E+R+ GTI+GV D S W S+WRSLK+QWDE + RP +VS
Sbjct: 1 FNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS 60
Query: 350 PWEIEPFVASAPLNLAQPAVKSKRP-RSID-IPASASAFW 387
PW+IE + S+ +++Q ++K K+ R ++ I A++S W
Sbjct: 61 PWDIEHLIPSS--DISQSSLKKKKHWRQLNEIGATSSNLW 98
>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
Length = 524
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 25 RELWKACAGPLV-EVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKI-LCRVV 82
R++W ACA P +P G VYYFP GH EQ + QEPL P +I LC+V
Sbjct: 238 RDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRP------QEPL---PGRIFLCKVT 288
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEP----RSPDQCLPEPPKQTVHSFCKILTASDTS 138
+ L A T+E A I+L P D Q++ SF K LT +D +
Sbjct: 289 DVRLGAA-ATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTDVT 347
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
+ A LP + + P L KDL G EW F + ++ R + GW
Sbjct: 348 KNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRNGWM 402
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
F + LV GD VF+R NGE+ + VRR
Sbjct: 403 EFSNANGLVTGDNAVFMRRGNGEMFMAVRR 432
>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 123
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRV 81
L ELW ACAGPLV +P G RV YFPQGH EQ+ ASTN+E+ Q P + +LP +++C++
Sbjct: 24 LNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQL 83
Query: 82 VHIELLAEQETDEVYAQITLH 102
+ A+ ETDEVYAQ+TL
Sbjct: 84 HN----ADVETDEVYAQMTLQ 100
>gi|20146083|emb|CAD29695.1| early auxin-induced protein 22 [Arabidopsis thaliana]
Length = 278
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 71/118 (60%), Gaps = 12/118 (10%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+T GYD+L +L +MF I+GQL W +V+TD E D
Sbjct: 150 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 208
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLDSELKSET 664
++L GDD W EF V+ I I S+ EV+ M S++G+ AI ++ SET
Sbjct: 209 ILLVGDDPWEEFVNCVQNIKILSSVEVQQM---------SLDGDLAAIPTTNQACSET 257
>gi|298111013|gb|ADB96329.2| auxin response factor 1 [Arabidopsis thaliana]
Length = 223
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASASA 385
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPATG 78
>gi|304307923|gb|ADL70256.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 211
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASASA 385
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPATG 78
>gi|284811179|gb|ADB96328.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 216
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASASA 385
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPATG 78
>gi|304307943|gb|ADL70266.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 219
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASASA 385
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPATG 78
>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
Length = 690
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 108 TEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQE 167
E P P+P Q H F K +T SD + ++HA C P LD+ L P Q
Sbjct: 52 NESDDPPSLPPKPTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVPCQT 110
Query: 168 LAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVR 227
L+ +D+ G WRF++ + + ++ T WS F+ K+L AGD F RG N EL + R
Sbjct: 111 LSFEDVSGKHWRFRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYIDFR 170
Query: 228 RLAHQQ 233
R + Q
Sbjct: 171 RRLNNQ 176
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K +T SD + ++HA C P LD+ L P Q L+ +D+ G WRF++ +
Sbjct: 197 HLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFEDVSGKHWRFRYSYW 255
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQ 233
+ ++ T GWS F+ K+L AGD F RG N EL + RR + Q
Sbjct: 256 NSSQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRLNNQ 303
>gi|304307925|gb|ADL70257.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASASA 385
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPATG 78
>gi|304307929|gb|ADL70259.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307935|gb|ADL70262.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307939|gb|ADL70264.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASAS 384
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPAT 77
>gi|304307941|gb|ADL70265.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 218
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASASA 385
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPATG 78
>gi|304307933|gb|ADL70261.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307937|gb|ADL70263.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 213
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASAS 384
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPAT 77
>gi|284811187|gb|ADB96332.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307927|gb|ADL70258.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307931|gb|ADL70260.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASAS 384
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPAT 77
>gi|284811183|gb|ADB96330.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASASA 385
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPATG 78
>gi|304307945|gb|ADL70267.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307947|gb|ADL70268.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 199
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 310 FTGTIVGVGDF-SEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQP 367
F+GTIVGV + S W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 368 AVKSKRPRSIDIPASAS 384
++KRPR +P+ A+
Sbjct: 61 PQRNKRPRPPGLPSPAT 77
>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
Length = 721
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 34/311 (10%)
Query: 73 LPSKI-LCRVVHIELLAEQETDEVYAQITLHP-ETDQT-EPRSPDQCLPEPPK--QTVHS 127
LP ++ LC+V + L A + +E++A ++L P DQ +P++P P P+ T+ S
Sbjct: 343 LPGRVFLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPADPGPSSPQVQTTLVS 400
Query: 128 FCKILTASDTSTHGGFSVL--RKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
F K LT +D + ++ R+ A LP L + P L KD+HG EW + ++
Sbjct: 401 FVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWK 457
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG-ENGELRVGVRRLAHQQSSMPSSVISSQ 244
H+L++GW F + RLV GD VF+R ++GE +G+RR + P SV
Sbjct: 458 EY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPE---PVSVDE-- 510
Query: 245 SMHLGVLATAAHAVKTSTLFIVYY-KPRTSQFIIGLNKYLEAVHHCFSVGM--RFKMRFE 301
V+ A + + Y + +F++ A+ F+ GM F E
Sbjct: 511 -----VIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVWAVE 565
Query: 302 GEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP 361
+ P G ++ + E + S WR ++++W A + R V+ W+I + +
Sbjct: 566 EDRLPNVGPQGKVIAI----ENYATSIWRMIQVEWPSCAGMNR--YVNFWQIREVLGESS 619
Query: 362 LNLAQPAVKSK 372
+ V+S+
Sbjct: 620 FEASTCIVRSQ 630
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 68/160 (42%), Gaps = 9/160 (5%)
Query: 74 PSKILCRVVHIELLAEQETDEVYAQITLHPETDQTEPR----SPDQCLPEPPKQTVHSFC 129
P LC V + L A+ T+E YA ITL P D PR +Q + F
Sbjct: 26 PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 85
Query: 130 KILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPR 189
K L +SD F+V A + PPL A Q L KDL G F + G
Sbjct: 86 KTLMSSDAEYRDRFAVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN-- 141
Query: 190 RHLLTTGWSTFVTSKRLVAGDAFVFL-RGENGELRVGVRR 228
R L W F V GD+ +F+ R ++ EL VGVRR
Sbjct: 142 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRR 181
>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
Length = 209
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D++ GYD+L L +MF I+GQL R + W +V+ D E D
Sbjct: 75 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 133
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
++L GDD W EF VK I I S +EV+ M+ + +++
Sbjct: 134 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNI 174
>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
Length = 381
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGD 606
RT TKVQ +G +VGR++D+ +GYD+L +L +MF I+GQL W +V+ D E D
Sbjct: 254 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 312
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S+ EV+ M+
Sbjct: 313 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 343
>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
Length = 412
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 235 SMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKP--RTSQFIIGLNKYLEAVHHC-FS 291
S+PSSV+S+ +M + L AA+ TL V Y P S+F++ L+KY A+ S
Sbjct: 36 SLPSSVLSANNMPIDALVVAAN----RTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLS 91
Query: 292 VGMRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSP 350
+G+RF M FE + GTIVG+ D WP S+W++++++WD+P +P RV
Sbjct: 92 IGLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRVCS 151
Query: 351 WEI 353
W+I
Sbjct: 152 WDI 154
>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 314
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDD 603
STR+ KV QG+A+GR+VDLT GY +L EL++MF+ G+L+ K W VV+TD
Sbjct: 242 GGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKEWMVVYTDY 301
Query: 604 EGDMMLAGDDQW 615
EGDMML GDD W
Sbjct: 302 EGDMMLVGDDPW 313
>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
Length = 317
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 16/128 (12%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVV 82
+ + LW C GPL+ +P G +V YFPQGH EQ+ AST +E FD+P +
Sbjct: 13 INQALWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQKEAD-----FDIP------IS 61
Query: 83 HIELLAEQETDEVYAQITLHPETDQTEP-RSPDQCLPEPPKQTVHSFCKILTASDTSTHG 141
H+ A+QE DEV+AQ+TL P + +P PD + KQT+ SF + LT+S S+
Sbjct: 62 HLH--ADQENDEVFAQMTLQPFSQTADPFLLPDFGIQT--KQTIVSFSRTLTSSGESSPR 117
Query: 142 GFSVLRKH 149
+L +H
Sbjct: 118 PLLILPRH 125
>gi|302761230|ref|XP_002964037.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
gi|300167766|gb|EFJ34370.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
Length = 113
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
TRT TKV G ++GRAVD+T Y +L EL +MF + GQL + W +VF D EGD+
Sbjct: 29 TRTYTKVYKLG-SIGRAVDVTRFSNYTELRWELARMFNLDGQLDQKSGWQLVFIDHEGDI 87
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEV 633
+L GDD W EF V+ I I S EV
Sbjct: 88 LLVGDDPWEEFVSSVRGIRILSPSEV 113
>gi|168053340|ref|XP_001779095.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669547|gb|EDQ56132.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
TR+ KV G ++ RAVD+ K Y +L EL +MF + GQL P W +VFTD+E D+
Sbjct: 716 TRSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPTVGWQLVFTDNEDDL 774
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEG 651
+L GDD W EF + V+ I I + EV K A++ G
Sbjct: 775 LLVGDDPWDEFVRNVRGIRILTPAEVYFYTNEEKCTAAAYNSTG 818
>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
Length = 591
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGDMMLA 610
KVQ +G +VGR++D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D++L
Sbjct: 483 KVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLV 541
Query: 611 GDDQWPEFCKMVKKIFIYSTEEVKNMA 637
GDD W EF V+ I I S+ EV+ M+
Sbjct: 542 GDDPWEEFVNCVQSIKILSSAEVQQMS 568
>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 84 IELLAEQETDEVYAQITLHPETDQT-EPRSPDQCLPEPPKQTV----HSFCKILTASDTS 138
+E+L DE Q D P +P + P+++ H F K +T SD
Sbjct: 82 VEMLRRHTYDEELDQCKKVFNMDAAANPVTPPNLPRDEPRESSPTREHLFDKAVTPSDVG 141
Query: 139 THGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 198
+ ++HA C P LD++ +P Q L+ +D+ G WRF++ + + ++LT GWS
Sbjct: 142 KLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYWNSSQSYVLTKGWS 200
Query: 199 TFVTSKRLVAGDAFVFLRGENGELRV 224
FV K+L AGD F RG N EL +
Sbjct: 201 RFVKEKKLDAGDIVSFERGRNHELYI 226
>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K +T SD + ++HA C P LD++ +P Q L+ +D+ G WRF++ +
Sbjct: 163 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYW 221
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
+ ++LT GWS FV K+L AGD F RG + EL + RR
Sbjct: 222 NSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFRR 264
>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
Length = 120
Score = 79.3 bits (194), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 294 MRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWE 352
MRF+MRFE ED+ ERR TG I G+ D +W GSKWR L ++WD+ +R RVSPWE
Sbjct: 1 MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAARR-NRVSPWE 59
Query: 353 IEPF-VASAPLNLAQPAVKSKR 373
IEP AS NL +K R
Sbjct: 60 IEPSGSASNSSNLMSAGLKRTR 81
>gi|168059962|ref|XP_001781968.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666541|gb|EDQ53192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 139
Score = 78.6 bits (192), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDM 607
TR+ KV G ++ RAVD+ K Y +L EL +MF + GQL P+ W +VFTD+E D+
Sbjct: 30 TRSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPKVGWQLVFTDNEDDL 88
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEG 651
+L GDD W EF + V+ I I + EV K A++ G
Sbjct: 89 LLVGDDPWEEFVRNVRGIRILTPAEVYYYTNEDKCTAAAYNPAG 132
>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
Length = 533
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 294 MRFKMRFEGEDSPERRFTGTIVGVGDFSE-QWPGSKWRSLKIQWDEPATVQRPERVSPWE 352
MRF+M FE E+S RR+ GTI G+ D +WP S WRS+K+ WDE +R RVS WE
Sbjct: 1 MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60
Query: 353 IEPFVASAPLNLAQPAVKSKRPRSIDIP--------ASASAFWYQGSTQSHDITQVVGAT 404
IEP + + P+ + ++ KRP P AS W +G + + +
Sbjct: 61 IEP-LTTFPMYPSLFPLRLKRPWHPGSPSLLDSRDEASNGLMWLRGGSGEPGLPSLNFQA 119
Query: 405 EGQSSESQVVRPMRQKEIDSTIINNNSTDDHRIVAA 440
+ P Q+ +D T++ N+ ++ + A
Sbjct: 120 N--------MLPWMQQRLDPTMLGNDHNQRYQAMLA 147
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G +VGR++D++ Y +L EL +MF I+G+L R W +VF D E D+
Sbjct: 425 TFVKVYKSG-SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDV 483
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+L GDD W F V I I S E+V +
Sbjct: 484 LLLGDDPWELFVNNVWYIKILSPEDVLKLG 513
>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
Length = 304
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK--WAVVFTDDEGD 606
RT TKV +G AVGR++D+ GY++L L +MF I+GQL R + W +V+ D E D
Sbjct: 171 RTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 229
Query: 607 MMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++L GDD W EF V+ I I S +EV+ M+
Sbjct: 230 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 260
>gi|294460143|gb|ADE75654.1| unknown [Picea sitchensis]
gi|294464227|gb|ADE77628.1| unknown [Picea sitchensis]
Length = 96
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 583 MFEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
MF I+G+L P W VV+TD+EGDMML GDD W EFC +V+KIFIY+ EEV+ M
Sbjct: 1 MFNIEGELGNPSKGWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIFIYTREEVEKM 55
>gi|297740767|emb|CBI30949.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
TRT KV G + GR++D+T Y +L EL +MF ++GQL R W +VF D E
Sbjct: 26 TRTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREN 84
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
D++L GDD WPEF V I I S +EV+ M + +SV
Sbjct: 85 DVLLLGDDPWPEFVNSVWCIKILSLQEVQQMGKRGLELLNSV 126
>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
Length = 528
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 208 AGDAF-VFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIV 266
GD F VFL GE S S +S++S V+ +A A +V
Sbjct: 15 GGDNFSVFLGGEMKSSGNTNNNTNSNGFSRNRSKVSAKS----VVESATLAAAGQPFEVV 70
Query: 267 YYKPRTS--QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTI--VGVGDFS 321
YY PR S +F + A+ +S GMRFKM FE EDS F GTI V + D
Sbjct: 71 YY-PRASTPEFCVKAQAVDAALRVQWSAGMRFKMAFETEDSSRISWFMGTISSVQLAD-P 128
Query: 322 EQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSKRPRSIDIP 380
WP S WR L++ WDEP +Q +RVSPW +E + P+ L + K+ R P
Sbjct: 129 VCWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVEVVSSMPPIQLTPFTLPKKKLRVTQHP 187
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 539 QNKQGSAA-STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWA 597
+N++G A + KV M+ VGR +DL+ Y+ L+ L KMF I+ +L ++
Sbjct: 431 KNREGKALEDSILHCKVFMESEDVGRTLDLSLFSSYEQLYHRLAKMFGIE-ELELSNR-- 487
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
V++ D +G + GD+ + +F K V+++ I S NM
Sbjct: 488 VLYKDTDGTVRHTGDEPYRDFMKTVRRLTILSDSSSDNMG 527
>gi|224062579|ref|XP_002300855.1| predicted protein [Populus trichocarpa]
gi|222842581|gb|EEE80128.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 547 STRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL--RPRDKWAVVFTDDE 604
STRT KV G + GR++D++ YD+L EL ++F ++GQL R R W +VF D E
Sbjct: 46 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGQLEDRQRSGWQLVFVDRE 104
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
D++L GDD W EF V I I S EV+ M A+SV
Sbjct: 105 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKEGLTSAASV 147
>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 264 FIVYYKPRT---SQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVG- 318
F V Y PR S F++ A+ ++ GMR KM E EDS F GT+ G G
Sbjct: 25 FDVVYYPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTGL 84
Query: 319 DFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAP-LNLAQPAVKSKR 373
S W GS WR L+I WDEP +Q +RVSPW++E FVA+ P L A P +K R
Sbjct: 85 PDSGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVE-FVATTPQLQAAFPPMKKLR 139
>gi|293336069|ref|NP_001170351.1| uncharacterized protein LOC100384328 [Zea mays]
gi|224035287|gb|ACN36719.1| unknown [Zea mays]
Length = 326
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + +TRT KV G +VGR++D+T Y +L +EL +
Sbjct: 201 LQSPMYGCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 259
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 260 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 316
>gi|302759398|ref|XP_002963122.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
gi|300169983|gb|EFJ36585.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
Length = 289
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMM 608
R+ TKV G ++GR++++ Y +L EL +MF ++GQL W +V+ D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 609 LAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAIS 655
L GDD+W EF V+ I I S EV I +S E GT +S
Sbjct: 241 LVGDDRWEEFVSSVRGIRIISPSEVA--------IYTSEEYAGTPLS 279
>gi|293332071|ref|NP_001169029.1| uncharacterized protein LOC100382863 [Zea mays]
gi|223974533|gb|ACN31454.1| unknown [Zea mays]
Length = 122
Score = 75.9 bits (185), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 529 GMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG 588
G D S QN + +TRT KV G +VGR++D+T Y +L +EL +MF I+G
Sbjct: 3 GCLDDSSGLLQNTGENDPTTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKG 61
Query: 589 QLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
QL D+ W +VF D E D++L GDD W F V I I S E+V M
Sbjct: 62 QLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMG 112
>gi|284811185|gb|ADB96331.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 183
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 324 WPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVA-SAPLNLAQPAVKSKRPRSIDIPAS 382
W S+WRSLK+QWDEP++V RPERVSPWE+EP VA S P + QP ++KRPR +P+
Sbjct: 1 WHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSP 60
Query: 383 AS 384
A+
Sbjct: 61 AT 62
>gi|302796880|ref|XP_002980201.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
gi|300151817|gb|EFJ18461.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
Length = 289
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
Query: 549 RTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMM 608
R+ TKV G ++GR++++ Y +L EL +MF ++GQL W +V+ D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 609 LAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAIS 655
L GDD+W EF V+ I I S EV I +S E GT +S
Sbjct: 241 LVGDDRWEEFVTSVRGIRIISPSEVA--------IYTSEEYAGTPLS 279
>gi|302800377|ref|XP_002981946.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
gi|302802339|ref|XP_002982925.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300149515|gb|EFJ16170.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300150388|gb|EFJ17039.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
Length = 93
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 46/74 (62%)
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFC 619
++GRAVD+ K Y +L EL +MF + GQL R+ W +VF D E D++L GDD W EF
Sbjct: 7 SIGRAVDVARFKNYVELRAELSRMFGLDGQLDQRNGWQLVFVDKENDLLLVGDDPWEEFV 66
Query: 620 KMVKKIFIYSTEEV 633
V+ I I S EV
Sbjct: 67 SSVRGIRILSPSEV 80
>gi|326487181|dbj|BAJ89575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 449
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
L+ G D S QN + ++RT KV G +VGR++D+T Y +L +EL +
Sbjct: 324 LQSPMYGCLDDSSGIFQNTGENDPTSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQ 382
Query: 583 MFEIQGQLRPRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
MF I+GQL D+ W +VF D E D++L GDD W F V I I S E+V +
Sbjct: 383 MFGIRGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKLG 439
>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
Query: 47 YFPQGHIEQLEASTNQELTHQEPLF-DLPSKILCRVVHIELLAEQETDEVYAQITLHPET 105
+F + + +L +E+ Q P + +LP +++C++ ++ + A+ TDEVYAQ+TL P +
Sbjct: 31 FFHRAIVSRLLHQLIKEVDAQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPLS 90
Query: 106 --DQTEPRSPDQCLPEPPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLAT 163
+Q EP P + L KQ + F K LT S+ STHGGFS+ R+ A + PPLD +L
Sbjct: 91 PEEQKEPFLPIE-LGGASKQPTNYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQP 149
Query: 164 PT 165
P
Sbjct: 150 PC 151
>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
Length = 354
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 29/272 (10%)
Query: 109 EPRSPDQCLPEPPK--QTVHSFCKILTASDTSTHGGFSVL--RKHATECLPPLDMTLATP 164
+P++P P P+ T+ SF K LT +D + ++ R+ A LP L + P
Sbjct: 13 QPQAPADPGPSSPQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP 72
Query: 165 TQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG-ENGELR 223
L KD+HG EW + ++ H+L++GW F + RLV GD VF+R ++GE
Sbjct: 73 ---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERY 127
Query: 224 VGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYY-KPRTSQFIIGLNKY 282
+G+RR + P SV V+ A + + Y + +F++
Sbjct: 128 MGLRRTLKPE---PVSVDE-------VIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIV 177
Query: 283 LEAVHHCFSVGM--RFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKIQWDEPA 340
A+ F+ GM F E + P G ++ + E + S WR ++++W A
Sbjct: 178 HNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAI----ENYATSIWRMIQVEWPSCA 233
Query: 341 TVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
+ R V+ W+I + + + V+S+
Sbjct: 234 GMNR--YVNFWQIREVLGESSFEASTCIVRSQ 263
>gi|238013004|gb|ACR37537.1| unknown [Zea mays]
Length = 82
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 583 MFEIQGQL-RPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
MF+ +G+L W +V+TDDEGDMML GDD W EFC +V+KI+IY+ EEV+ M + S
Sbjct: 1 MFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKS 59
>gi|224103213|ref|XP_002334077.1| predicted protein [Populus trichocarpa]
gi|222869513|gb|EEF06644.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 542 QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVV 599
QG+ S RT KV G + GR++D+T Y++L EL MF ++GQL R W +V
Sbjct: 21 QGNPPS-RTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLV 78
Query: 600 FTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSV 647
F D E D++L GD WPEF V I I S +EV+ M + +SV
Sbjct: 79 FIDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGKRGLELLNSV 126
>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 269 KPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF-----TGTIVGVGDFS-E 322
+ +S+F I NK+L+++ FS GMRFKM FE ED+ ERRF TG I GV +
Sbjct: 27 RASSSEFTIPFNKFLKSLDQSFSSGMRFKMCFETEDAAERRFAIHGYTGIITGVSELDPA 86
Query: 323 QWPGSKWRSLKIQW 336
+WPGSKW+ L + W
Sbjct: 87 RWPGSKWKCLLVSW 100
>gi|170677558|gb|ACB30851.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
+ T KV G + GR++D++ Y +L EL +MF ++GQL R W +VF D E
Sbjct: 3 SNTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLENPVRSGWQLVFVDREN 61
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD WPEF V I I S +EV+ M
Sbjct: 62 DVLLLGDDPWPEFVSSVWCIKILSPQEVQQMG 93
>gi|170677526|gb|ACB30835.1| ARF6, partial [Arabidopsis thaliana]
gi|170677528|gb|ACB30836.1| ARF6, partial [Arabidopsis thaliana]
gi|170677530|gb|ACB30837.1| ARF6, partial [Arabidopsis thaliana]
gi|170677532|gb|ACB30838.1| ARF6, partial [Arabidopsis thaliana]
gi|170677534|gb|ACB30839.1| ARF6, partial [Arabidopsis thaliana]
gi|170677536|gb|ACB30840.1| ARF6, partial [Arabidopsis thaliana]
gi|170677538|gb|ACB30841.1| ARF6, partial [Arabidopsis thaliana]
gi|170677540|gb|ACB30842.1| ARF6, partial [Arabidopsis thaliana]
gi|170677542|gb|ACB30843.1| ARF6, partial [Arabidopsis thaliana]
gi|170677544|gb|ACB30844.1| ARF6, partial [Arabidopsis thaliana]
gi|170677546|gb|ACB30845.1| ARF6, partial [Arabidopsis thaliana]
gi|170677548|gb|ACB30846.1| ARF6, partial [Arabidopsis thaliana]
gi|170677550|gb|ACB30847.1| ARF6, partial [Arabidopsis thaliana]
gi|170677552|gb|ACB30848.1| ARF6, partial [Arabidopsis thaliana]
gi|170677554|gb|ACB30849.1| ARF6, partial [Arabidopsis thaliana]
gi|170677556|gb|ACB30850.1| ARF6, partial [Arabidopsis thaliana]
gi|170677560|gb|ACB30852.1| ARF6, partial [Arabidopsis thaliana]
gi|170677562|gb|ACB30853.1| ARF6, partial [Arabidopsis thaliana]
gi|170677564|gb|ACB30854.1| ARF6, partial [Arabidopsis thaliana]
gi|170677566|gb|ACB30855.1| ARF6, partial [Arabidopsis thaliana]
gi|170677568|gb|ACB30856.1| ARF6, partial [Arabidopsis thaliana]
gi|170677570|gb|ACB30857.1| ARF6, partial [Arabidopsis thaliana]
gi|170677572|gb|ACB30858.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
+ T KV G + GR++D++ Y +L EL +MF ++GQL R W +VF D E
Sbjct: 3 SNTFVKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDREN 61
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD WPEF V I I S +EV+ M
Sbjct: 62 DVLLLGDDPWPEFVSSVWCIKILSPQEVQQMG 93
>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
Length = 496
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 127/341 (37%), Gaps = 52/341 (15%)
Query: 25 RELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHI 84
R +W ACA PL +P G +V YFP+GH EQ A L F LC + +
Sbjct: 26 RLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHRFF------LCTITAV 79
Query: 85 ELLAEQETDEVYAQITLHP-----ETDQTEPRSPDQCLPEPPKQTVHSFCKILTASDTST 139
+L A+ T E YA I+L P P L E Q + K LT SD +
Sbjct: 80 DLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANN 139
Query: 140 HGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 199
GGFSV R A P L++ P E G R I PR
Sbjct: 140 GGGFSVPRLCADHIFPALNLDDDPPRPE---PHHGGPAGRLVGIPPHLPRH--------- 187
Query: 200 FVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVK 259
A A R E R H +P V+ A
Sbjct: 188 --------AAPAPADDRVEQVRERQAAGGRGHGGVHVPQEVME-----------AVRLAA 228
Query: 260 TSTLFIVYYKPR--TSQFIIGLNKYLEAVHHCFSVGMRFKMR-FEGEDSPERRFTGTIVG 316
F V Y PR +F++ + + + + GM+ + + E ED+ RR
Sbjct: 229 EQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDT--RRLAWLNGT 286
Query: 317 VGDFSEQWPGSKWRSLKIQWDEPA--TVQRPERVSPWEIEP 355
+ + Q WR+L+++WD A + + V+PW+++P
Sbjct: 287 LTNLRHQ---QIWRTLEVEWDASAASSSMKNRFVNPWQVQP 324
>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 216 RGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPR--TS 273
R N EL +GVRR A + S SS + +A AA F V Y PR +S
Sbjct: 3 RNSNSELFIGVRRDARWNRNGERS--SSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSS 60
Query: 274 QFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERR-FTGTIVGVGDFSEQ-WPGSKWRS 331
F++ EA+ ++ GMR KM E EDS + F GT+ W GS WR
Sbjct: 61 DFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRM 120
Query: 332 LKIQWDEPATVQRPERVSPWEIE 354
L++ WDEP +Q RVSPW++E
Sbjct: 121 LQVTWDEPEVLQNVMRVSPWQVE 143
>gi|297738134|emb|CBI27335.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEG 605
+RT KV G +VGR++D+T Y +L +EL +MF I+G+L R W +VF D E
Sbjct: 35 SRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDREN 93
Query: 606 DMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D++L GDD W F V I I S E+V+ M
Sbjct: 94 DVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 125
>gi|85069285|gb|ABC69714.1| ARF2-like protein [Nicotiana tabacum]
Length = 264
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 548 TRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGD 606
+R+ TKV G A+GR++D++ +KGY +L EL+K+F +G L K W V + D EG+
Sbjct: 171 SRSCTKVLKYGCALGRSIDMSRVKGYGELISELDKLFGFEGSLLDGSKDWHVTYQDREGN 230
Query: 607 MMLAGDDQWPEFCKMVKKIFI 627
L GD W + MV+K+FI
Sbjct: 231 TKLLGDYPWSDSQAMVRKMFI 251
>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 216
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 83/203 (40%), Gaps = 70/203 (34%)
Query: 187 QPRRHLLTTGWS--TFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQ 244
QPR HL+T GWS T V+ K L + D +FL
Sbjct: 66 QPRWHLITIGWSILTIVSQKNLTSCDVVLFL----------------------------- 96
Query: 245 SMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGED 304
A HA +F+I KY+ ++ + +G RF MRFE D
Sbjct: 97 ---------ATHA----------------EFVIPYEKYITSIRNPICIGTRFIMRFEMND 131
Query: 305 SPERRFTGTIVGVGDFS-EQWPGSKWRSLKIQWDEPATV-QRPERVSPWEIEPFVASAPL 362
SPE R G + GV D +WP SKW D + V ERVS WEI+P V+ L
Sbjct: 132 SPE-RCAGVVAGVYDLDPYRWPNSKWC------DGMSLVSDHQERVSLWEIDPSVSLPHL 184
Query: 363 NLAQPAVKSKRPRSIDIPASASA 385
++ S RP ID P+S A
Sbjct: 185 SIQS----SPRPWEID-PSSTFA 202
>gi|361069823|gb|AEW09223.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171017|gb|AFG68785.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171018|gb|AFG68786.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171019|gb|AFG68787.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171020|gb|AFG68788.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171021|gb|AFG68789.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171022|gb|AFG68790.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171023|gb|AFG68791.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171024|gb|AFG68792.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171025|gb|AFG68793.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171026|gb|AFG68794.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171027|gb|AFG68795.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171028|gb|AFG68796.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171029|gb|AFG68797.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171030|gb|AFG68798.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171031|gb|AFG68799.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171032|gb|AFG68800.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
Length = 89
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGPL+ +PR G V YFPQGH+EQ S Q+ Q ++LP +I CRV+++
Sbjct: 32 ELWHACAGPLISLPRKGTLVVYFPQGHLEQASTSLKQQ---QMRPYELPPQIFCRVLNVN 88
Query: 86 L 86
L
Sbjct: 89 L 89
>gi|168037231|ref|XP_001771108.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677641|gb|EDQ64109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 545 AASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PRDKWAVVFTD 602
A+S RT TKV G +VGR++D+ Y +L EL KMF + + P W +VF D
Sbjct: 26 ASSQRTFTKVHKLG-SVGRSLDVRIFNTYAELRKELAKMFHLDCLMEDPPTSGWQIVFVD 84
Query: 603 DEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+E D +L GDD W +F V+ I I S EV ++
Sbjct: 85 NENDTLLLGDDPWEDFLNCVRSIKILSPSEVTQIS 119
>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
Length = 262
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K +T SD + ++HA C P LD++ L+ +D+ G WRF++ +
Sbjct: 157 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 215
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
+ ++LT GWS FV K+L AGD F RG EL + RR
Sbjct: 216 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 258
>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
Length = 261
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K +T SD + ++HA C P LD++ L+ +D+ G WRF++ +
Sbjct: 156 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 214
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRR 228
+ ++LT GWS FV K+L AGD F RG EL + RR
Sbjct: 215 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 257
>gi|168061668|ref|XP_001782809.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665711|gb|EDQ52386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 100
Score = 69.3 bits (168), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK-WAVVFTDDEGDMMLAGD 612
V QG VGR +DL + YD L L +F +QGQL K W +V+TD E D++L GD
Sbjct: 1 VYQQG-KVGRTIDLRKCESYDGLRRVLANLFNLQGQLDDVTKGWQLVYTDHENDVLLVGD 59
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGE 650
D W EFC V+ + I S ++ P +S E +
Sbjct: 60 DPWEEFCGCVRSLKILSPQDAAGQTVGRIPASSCEEDD 97
>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 36/58 (62%)
Query: 157 LDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVF 214
LD T P + + AKD+HG W+F+HI+RG PRRHLL TGWS FV K G F
Sbjct: 13 LDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLCF 70
>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
Length = 476
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 563 RAVDLTALKGYDDLFDELEKMFEIQGQLR-PR-DKWAVVFTDDEGDMMLAGDDQWPEFCK 620
R D+ +GYD+L +L +MF I+GQL P+ W +V+ D E D++L GDD W EF
Sbjct: 362 RMRDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVN 421
Query: 621 MVKKIFIYSTEEVKNMA 637
V+ I I S+ EV+ M+
Sbjct: 422 CVQSIKILSSAEVQQMS 438
>gi|413934439|gb|AFW68990.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 510
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 550 TRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDM 607
T KV G GR++D+T Y +L EL ++F ++GQL R W +VF D E D+
Sbjct: 378 TFVKVYKSG-TYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDV 436
Query: 608 MLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEGEGTAISLD 657
+L GDD W EF V I I S +EV+ M + SS S D
Sbjct: 437 LLVGDDPWQEFVSTVSCIKILSPQEVQQMGKQGLELLSSAPARRLGSSCD 486
>gi|23343944|gb|AAN16891.1| auxin-responsive factor protein [Mirabilis jalapa]
Length = 137
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLR--PR 593
+ +N + TRT KV G + GR++D++ Y +L EL ++F ++ +L+ PR
Sbjct: 39 QSIENVDQTNQPTRTFVKVHKMG-SFGRSLDISQFSSYQELRSELARLFGLENELKDSPR 97
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
+VF D E D++L GDD W EF K V I I S +EV
Sbjct: 98 SGSQLVFVDRENDVLLLGDDPWQEFVKTVGHIRILSPQEV 137
>gi|224085429|ref|XP_002307573.1| predicted protein [Populus trichocarpa]
gi|222857022|gb|EEE94569.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--R 593
+ ++N STRT KV G + GR++D++ YD+L EL ++F ++G L R
Sbjct: 39 QSSENVDQVNPSTRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQR 97
Query: 594 DKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
W +VF D E D++L GDD W EF V I I S EV
Sbjct: 98 SGWQLVFGDRENDVLLLGDDPWQEFVNNVWYIKILSPLEV 137
>gi|147765452|emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
Length = 893
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 7/71 (9%)
Query: 91 ETDEVYAQITLHPETDQTEPRSPDQCLPE----PPKQTVHSFCKILTASDTSTHGGFSVL 146
+TDEVYAQ+TL P + Q + D LP P KQ + FCK L ASDTSTHGGFSV
Sbjct: 375 KTDEVYAQMTLQPLSPQEQK---DAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVP 431
Query: 147 RKHATECLPPL 157
R+ A + PPL
Sbjct: 432 RRAAEKVFPPL 442
>gi|170677574|gb|ACB30859.1| ARF8, partial [Arabidopsis thaliana]
gi|170677576|gb|ACB30860.1| ARF8, partial [Arabidopsis thaliana]
gi|170677578|gb|ACB30861.1| ARF8, partial [Arabidopsis thaliana]
gi|170677580|gb|ACB30862.1| ARF8, partial [Arabidopsis thaliana]
gi|170677582|gb|ACB30863.1| ARF8, partial [Arabidopsis thaliana]
gi|170677584|gb|ACB30864.1| ARF8, partial [Arabidopsis thaliana]
gi|170677586|gb|ACB30865.1| ARF8, partial [Arabidopsis thaliana]
gi|170677588|gb|ACB30866.1| ARF8, partial [Arabidopsis thaliana]
gi|170677590|gb|ACB30867.1| ARF8, partial [Arabidopsis thaliana]
gi|170677592|gb|ACB30868.1| ARF8, partial [Arabidopsis thaliana]
gi|170677594|gb|ACB30869.1| ARF8, partial [Arabidopsis thaliana]
gi|170677596|gb|ACB30870.1| ARF8, partial [Arabidopsis thaliana]
gi|170677598|gb|ACB30871.1| ARF8, partial [Arabidopsis thaliana]
gi|170677600|gb|ACB30872.1| ARF8, partial [Arabidopsis thaliana]
gi|170677602|gb|ACB30873.1| ARF8, partial [Arabidopsis thaliana]
gi|170677604|gb|ACB30874.1| ARF8, partial [Arabidopsis thaliana]
gi|170677606|gb|ACB30875.1| ARF8, partial [Arabidopsis thaliana]
gi|170677608|gb|ACB30876.1| ARF8, partial [Arabidopsis thaliana]
gi|170677610|gb|ACB30877.1| ARF8, partial [Arabidopsis thaliana]
gi|170677612|gb|ACB30878.1| ARF8, partial [Arabidopsis thaliana]
gi|170677614|gb|ACB30879.1| ARF8, partial [Arabidopsis thaliana]
gi|170677616|gb|ACB30880.1| ARF8, partial [Arabidopsis thaliana]
gi|170677618|gb|ACB30881.1| ARF8, partial [Arabidopsis thaliana]
gi|170677620|gb|ACB30882.1| ARF8, partial [Arabidopsis thaliana]
Length = 130
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 544 SAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFT 601
S+ T+ KV G +VGR++D++ Y +L +EL KMF I+G L R W +VF
Sbjct: 42 SSNQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFV 100
Query: 602 DDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
D E D++L GDD W F V I I S E
Sbjct: 101 DKENDILLLGDDPWESFVNNVWYIKILSPE 130
>gi|125554220|gb|EAY99825.1| hypothetical protein OsI_21816 [Oryza sativa Indica Group]
Length = 183
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQ-----LRPRDKWAVVFTDDEGDM 607
KV+M+G+A+GR +DL+ L Y +L D L MF Q R R +AV + D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 608 MLAGDDQWPEFCKMVKKIFI 627
ML GD W F K VK++ I
Sbjct: 162 MLVGDVPWEAFAKSVKRLKI 181
>gi|195635917|gb|ACG37427.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 30/147 (20%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRT-------KVQMQGIAVGRAVDLTALKGYDD 575
++ +R +A SR +N+ G A+ +T K+ M GI +GR +DL+AL YD+
Sbjct: 127 VRAFRRNLATSSRASLENQNGKKAAKPEQTTKRAPFVKINMDGIPIGRKIDLSALGSYDE 186
Query: 576 LFDELEKMFE-----------------------IQGQLRPRDKWAVVFTDDEGDMMLAGD 612
L ++K+F I G L ++ +V+ D EGD +L GD
Sbjct: 187 LSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGD 246
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMATS 639
W F VK++ + T ++ + T+
Sbjct: 247 VPWGMFVSSVKRLRVLKTSDLSSSLTA 273
>gi|302398583|gb|ADL36586.1| ARF domain class transcription factor [Malus x domestica]
Length = 295
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF----------EIQGQLRPRD------KW 596
KV M GI +GR V+L+A Y+ L +LE MF E++G RP ++
Sbjct: 180 KVNMDGIPIGRKVNLSAHSSYEALAQKLEDMFGPSTHGSGGQEMEGATRPSKLLDGSFEF 239
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
A+ + D +GD ML GD W F VK++ I T E +A
Sbjct: 240 ALTYEDKDGDWMLVGDVPWEMFLGTVKRLRIMRTSEANGLA 280
>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
PP + H F K++T SD + ++HA P LD + L +D +G WR
Sbjct: 45 PPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWR 103
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
F++ + + +++T GWS FV K+L AGD F RG
Sbjct: 104 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 141
>gi|297605239|ref|NP_001056915.2| Os06g0166500 [Oryza sativa Japonica Group]
gi|75252070|sp|Q5VRR0.1|IAA20_ORYSJ RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|55296040|dbj|BAD67602.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|55296147|dbj|BAD67865.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|125596172|gb|EAZ35952.1| hypothetical protein OsJ_20255 [Oryza sativa Japonica Group]
gi|215734885|dbj|BAG95607.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676750|dbj|BAF18829.2| Os06g0166500 [Oryza sativa Japonica Group]
Length = 183
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQ-----LRPRDKWAVVFTDDEGD 606
KV+M+G+A+GR +DL+ L Y +L D L MF Q R R +AV + D EGD
Sbjct: 101 VKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGD 160
Query: 607 MMLAGDDQWPEFCKMVKKIFI 627
M GD W F K VK++ I
Sbjct: 161 WMQVGDVPWEAFAKSVKRLKI 181
>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
Length = 404
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 15/176 (8%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYW 143
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG----ENGELRVGVRRLAHQQSSMPSSVI 241
+ +++T GWS FV KRL AGD F RG L + R+ + S P ++
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRML 203
Query: 242 SSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFK 297
+H+ LA+ ++ P + + HH F + F+
Sbjct: 204 PRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLY----------EHHRFRQALDFR 249
>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
Length = 274
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQE--------LAAKDLHGYE 177
H F K++T SD + ++HA P LD + A L+ +D G
Sbjct: 28 HMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGGGKGLVLSFEDRAGKA 87
Query: 178 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGE 221
WRF++ + + +++T GWS FV KRL AGD +F RG GE
Sbjct: 88 WRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAGGE 131
>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
AltName: Full=Protein NGATHA3
gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
Length = 358
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 120 PPKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWR 179
PP + H F K++T SD + ++HA P LD + L +D +G WR
Sbjct: 48 PPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWR 106
Query: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
F++ + + +++T GWS FV K+L AGD F RG
Sbjct: 107 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
Length = 409
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD Q L+ +D G WRF++ +
Sbjct: 92 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYSYW 150
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELR 223
+ +++T GWS FV KRL AGD F RG R
Sbjct: 151 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAGDTAR 188
>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
Length = 253
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K+LT SD V ++HA P A +L +D G W+F++ +
Sbjct: 55 HMFDKVLTPSDVGKLNRLVVPKQHAERFFPA-----AGAGTQLCFQDCGGALWQFRYSYW 109
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELR 223
G + +++T GWS FV + RL AGD F RG G R
Sbjct: 110 GSSQSYVMTKGWSRFVRAARLAAGDTVTFSRGAGGGGR 147
>gi|296089028|emb|CBI38731.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 93 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 151
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGVRRLAHQQSSMPSSVISS 243
+ +++T GWS FV K+L AGD F R GE+G+ R+ + + P+S+
Sbjct: 152 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL--- 208
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRT 272
+HL + +V+ L+ + P T
Sbjct: 209 SHLHLPTQLPFSQSVRWGRLYSLPQSPNT 237
>gi|80750878|dbj|BAE48151.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 100
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 21 GDLYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCR 80
G + ELW ACAGPL+ +P+ G V YFPQGH+EQ + ++ LP + CR
Sbjct: 40 GGVCLELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAA-------IYGLPPHVFCR 92
Query: 81 VVHIELLA 88
++ ++L A
Sbjct: 93 ILDVKLHA 100
>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Vitis vinifera]
Length = 461
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 137 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 195
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGVRRLAHQQSSMPSSVISS 243
+ +++T GWS FV K+L AGD F R GE+G+ R+ + + P+S+
Sbjct: 196 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL--- 252
Query: 244 QSMHLGVLATAAHAVKTSTLFIVYYKPRTS 273
+HL + +V+ L+ + P S
Sbjct: 253 SHLHLPTQLPFSQSVRWGRLYSLPQSPSMS 282
>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
AltName: Full=Protein NGATHA 4
gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
Length = 333
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K+LT SD + ++HA P D T L +D +G WRF++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGT---VLDFQDKNGKMWRFRYSYW 90
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV K+L AGD F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
Length = 328
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K+LT SD + ++HA P D T L +D +G WRF++ +
Sbjct: 29 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGT---VLDFQDKNGKMWRFRYSYW 85
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV K+L AGD F RG
Sbjct: 86 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 117
>gi|242064546|ref|XP_002453562.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
gi|241933393|gb|EES06538.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
Length = 292
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 42/175 (24%)
Query: 508 SARAASDFDASQNQD------------LKEVKRGMADVSRKETQNKQGSAASTRTRT--- 552
+AR AS +ASQ + ++ +R +A S+ ++ G A+ T
Sbjct: 109 NARLASTNNASQARQRSPNTPVIGWPPVRAFRRNLATSSKASLEHHNGKKAARPEETTKR 168
Query: 553 ----KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE----------------------- 585
K+ M GI +GR +DL AL YD+L ++K+F
Sbjct: 169 APFVKINMDGIPIGRKIDLNALGSYDELSLSVDKLFRGLLAAQQDPLDASTKECSQEEVA 228
Query: 586 IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
I G L ++ +V+ D EGD +L GD W F VK++ + T ++ + T+S
Sbjct: 229 ISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLTAS 283
>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
[Brachypodium distachyon]
Length = 213
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA E PLD L+ ++ G WRF++ +
Sbjct: 5 HMFEKVVTPSDVGKLNRLVIPKQHA-ERYFPLDFDKGNGGIILSFEERGGKAWRFRYSYW 63
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL+AGDA +F RG
Sbjct: 64 NSSQSYVMTKGWSRFVKDKRLLAGDAVLFARG 95
>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
Length = 1203
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 218 ENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRT--SQF 275
E L GVRR QQ+S+PSSV+S+ S+H+GVLA +HA + F ++Y PR S+F
Sbjct: 500 EQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRACPSKF 559
Query: 276 IIGLN 280
I N
Sbjct: 560 ISSAN 564
>gi|242075446|ref|XP_002447659.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
gi|241938842|gb|EES11987.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
Length = 74
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 293 GMRFKMRFEGEDSPERRFTGTIVGVGDFSEQWPGSKWRSLKI 334
G+RF+MRFEGE++ ERRFTGTIV + WP S WR LK+
Sbjct: 15 GVRFRMRFEGEEALERRFTGTIVRCENLDPLWPDSSWRYLKV 56
>gi|304308209|gb|ADL70417.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 63
Score = 60.8 bits (146), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 26/89 (29%)
Query: 241 ISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRF 300
IS+ M GV+A+ +A KT +F V YKPR M+F
Sbjct: 1 ISANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQF 34
Query: 301 EGEDSPERRFTGTIVGVGDFSEQWPGSKW 329
EG+D E+R+ GTI+GV D S W S+W
Sbjct: 35 EGKDFSEKRYDGTIIGVNDMSPHWKDSEW 63
>gi|302762190|ref|XP_002964517.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
gi|300168246|gb|EFJ34850.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
Length = 335
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 525 EVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGI-AVGRAVDLTALKGYDDLFDELEKM 583
+ K +A ++ + S A RT T Q + +GRA+DL +GY +L +EL+ +
Sbjct: 123 KAKTALASTAKDDVHKDLESLA--RTGTSSSKQDVHQMGRALDLRKFRGYRELLEELQHL 180
Query: 584 FEIQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFC--KMVKKIFIYSTEEVKNMATSSK 641
F I L +W V+ D+EGDM+L GDD W F ++ ++S E++ + ++
Sbjct: 181 FGIDKNLNG-SEWQAVYVDNEGDMLLVGDDPWGVFTFQGVLHDGAMHSAAEIQKLTVQAR 239
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 309 RFTGTIVGVGDFS-EQWPGSKWRSLKIQW 336
R+ GTI G+GD +WPGSKWR K W
Sbjct: 55 RYMGTITGIGDIDPARWPGSKWRFPKCSW 83
>gi|224070983|ref|XP_002303315.1| predicted protein [Populus trichocarpa]
gi|222840747|gb|EEE78294.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
Query: 537 ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE----------- 585
E+QNK K+ M+G+ +GR VDL A Y+ L ++++F
Sbjct: 204 ESQNKPAGTCKKGLFVKINMEGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSC 263
Query: 586 ------------IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
I G L ++ +V+ D+EGD ML GD W F VK++ + + EV
Sbjct: 264 NGIMNKQEGEKAIMGVLDGSGEYKLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEV 323
Query: 634 KNMATSS 640
+ S
Sbjct: 324 SALNLGS 330
>gi|21593621|gb|AAM65588.1| putative auxin-induced protein, IAA12 [Arabidopsis thaliana]
Length = 239
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 20/139 (14%)
Query: 519 QNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQ--------MQGIAVGRAVDLTAL 570
NQ +K + D +K +N + S + KVQ M G+ +GR VD+ A
Sbjct: 86 NNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNAKVQGLGFVKVNMDGVGIGRKVDMRAH 145
Query: 571 KGYDDLFDELEKMF---------EIQGQLRPRD---KWAVVFTDDEGDMMLAGDDQWPEF 618
Y++L LE+MF E LR D + + + D EGD ML GD W F
Sbjct: 146 SSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMF 205
Query: 619 CKMVKKIFIYSTEEVKNMA 637
VK++ I T E +A
Sbjct: 206 INSVKRLRIMGTSEASGLA 224
>gi|125552982|gb|EAY98691.1| hypothetical protein OsI_20621 [Oryza sativa Indica Group]
Length = 102
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 26 ELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFDLPSKILCRVVHIE 85
ELW ACAGP V +PR G + Y PQ H L A +P + CRVV +E
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAH---LAADGGGGEVPPAGAAAVPPHVACRVVGVE 79
Query: 86 LLAEQETDEVYAQITLHPE 104
L A+ TDEVYA++ L E
Sbjct: 80 LRADAATDEVYARLALVAE 98
>gi|413938320|gb|AFW72871.1| hypothetical protein ZEAMMB73_098228 [Zea mays]
Length = 303
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQELTHQEPLFD 72
L+ ELWKACAGPL VP GE+VYY PQGHIEQ+ + + + H+E L +
Sbjct: 137 LFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQISQNVVRHI-HKELLVE 185
>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
Length = 505
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGVRRLAHQQSSMPSSV 240
+ +++T GWS FV K+L AGD F R GE+G+ R+ + + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|312282513|dbj|BAJ34122.1| unnamed protein product [Thellungiella halophila]
Length = 249
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF--------EIQGQ----LRPRD---KWA 597
KV M G+A+GR VDL A Y++L LE MF + GQ LR D ++
Sbjct: 135 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRNNPGTIGLTGQFTKPLRLLDGSSEFV 194
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + D EGD ML GD W F VK++ + T E +A
Sbjct: 195 LTYEDKEGDWMLVGDVPWRMFITSVKRLRVMKTSEANGLA 234
>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
vinifera]
Length = 411
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGVRRLAHQQSSMPSSV 240
+ +++T GWS FV K+L AGD F R GE+G+ R+ + + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
Length = 327
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA P LD L+ +D G WRF++ +
Sbjct: 36 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYSYW 94
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG----ENGELRVGVRR----------LAH 231
+ +++T GWS FV KRL AGD F RG G L + RR H
Sbjct: 95 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDPPVVHHQYHH 154
Query: 232 QQSSMPSSVI 241
+ +PS+V+
Sbjct: 155 HRLPLPSAVV 164
>gi|295918075|gb|ADG60256.1| ARF8-like protein [Nicotiana tabacum]
Length = 119
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 560 AVGRAVDLTALKGYDDLFDELEKMFEIQGQLRP--RDKWAVVFTDDEGDMMLAGDDQWPE 617
GR++D+T Y +L EL +MF I+G L R W +VF D E D++L GDD W
Sbjct: 2 VCGRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEA 61
Query: 618 FCKMVKKIFIYSTEEVKNMA 637
F V I I S E+V+ +
Sbjct: 62 FVNNVWYIKILSPEDVQKLG 81
>gi|15219761|ref|NP_171949.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
gi|11131318|sp|Q38830.1|IAA12_ARATH RecName: Full=Auxin-responsive protein IAA12; AltName:
Full=Indoleacetic acid-induced protein 12; AltName:
Full=Protein BODENLOS
gi|12083206|gb|AAG48762.1|AF332398_1 auxin-induced protein, IAA12 [Arabidopsis thaliana]
gi|972927|gb|AAC49053.1| IAA12 [Arabidopsis thaliana]
gi|2494122|gb|AAB80631.1| Match to Arabidopsis IAA12 (gb|U18414) [Arabidopsis thaliana]
gi|17529012|gb|AAL38716.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|20465451|gb|AAM20185.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|332189592|gb|AEE27713.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
Length = 239
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 20/139 (14%)
Query: 519 QNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQ--------MQGIAVGRAVDLTAL 570
NQ +K + D +K +N + S + KVQ M G+ +GR VD+ A
Sbjct: 86 NNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAH 145
Query: 571 KGYDDLFDELEKMF---------EIQGQLRPRD---KWAVVFTDDEGDMMLAGDDQWPEF 618
Y++L LE+MF E LR D + + + D EGD ML GD W F
Sbjct: 146 SSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMF 205
Query: 619 CKMVKKIFIYSTEEVKNMA 637
VK++ I T E +A
Sbjct: 206 INSVKRLRIMGTSEASGLA 224
>gi|326507026|dbj|BAJ95590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 168
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
KV+M+G+ +GR VDL+ Y +L L MF + D +AV + D +GD ML G
Sbjct: 92 VKVKMEGVPIGRMVDLSRHASYHELHHTLRLMFP-SSTVHHADPYAVTYEDGDGDWMLVG 150
Query: 612 DDQWPEFCKMVKKIFI 627
D W EF K K++ I
Sbjct: 151 DVPWEEFSKSAKRLKI 166
>gi|297808601|ref|XP_002872184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318021|gb|EFH48443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 147
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 536 KETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDK 595
KE K+ S K+ M+G+ +GR V+L+A Y L ++++F + +
Sbjct: 39 KEEMKKRESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ 98
Query: 596 WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ +V+ D EGD +L GD W F VK++ + T +++
Sbjct: 99 YTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSNASSLS 140
>gi|297826783|ref|XP_002881274.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297327113|gb|EFH57533.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF------------EIQGQLRPRD---KWA 597
KV M G+A+GR VDL+A Y++L LE MF + LR D ++
Sbjct: 127 KVNMDGVAIGRKVDLSAHSSYENLSQTLEDMFFRTNPGTIGLTSQFTKPLRLLDGSSEFV 186
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + D EGD ML GD W F VK++ + T E +A
Sbjct: 187 LTYEDKEGDWMLVGDVPWRMFITSVKRLRVMKTSEANGLA 226
>gi|449456452|ref|XP_004145963.1| PREDICTED: uncharacterized protein LOC101211271 [Cucumis sativus]
Length = 336
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA E PLD + L +D +G WRF++ +
Sbjct: 55 HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLDSSTNDKGLLLNFEDRNGKSWRFRYSYW 113
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 114 NSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRG 145
>gi|30685642|ref|NP_850205.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|38503400|sp|Q38831.2|IAA13_ARATH RecName: Full=Auxin-responsive protein IAA13; AltName:
Full=Indoleacetic acid-induced protein 13
gi|29028860|gb|AAO64809.1| At2g33310 [Arabidopsis thaliana]
gi|110742999|dbj|BAE99393.1| auxin regulated protein [Arabidopsis thaliana]
gi|330253719|gb|AEC08813.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 247
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF------------EIQGQLRPRD---KWA 597
KV M G+A+GR VDL A Y++L LE MF + LR D ++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + D EGD ML GD W F VK++ + T E +A
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232
>gi|125559895|gb|EAZ05343.1| hypothetical protein OsI_27548 [Oryza sativa Indica Group]
Length = 246
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE--IQGQLRPRD--------- 594
+S+ KV ++G AVGR +DL A + YD L L+ MF + + RD
Sbjct: 140 SSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEG 199
Query: 595 ---KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 627
++ +V+ D+EGD ML GD W F VK+++I
Sbjct: 200 SKKRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|15225833|ref|NP_180889.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|186504957|ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|12083208|gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana]
gi|972929|gb|AAC49054.1| IAA13 [Arabidopsis thaliana]
gi|2459414|gb|AAB80649.1| auxin regulated protein (IAA13) [Arabidopsis thaliana]
gi|21537404|gb|AAM61745.1| auxin regulated protein IAA13 [Arabidopsis thaliana]
gi|330253718|gb|AEC08812.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|330253720|gb|AEC08814.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 246
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF------------EIQGQLRPRD---KWA 597
KV M G+A+GR VDL A Y++L LE MF + LR D ++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
+ + D EGD ML GD W F VK++ + T E +A ++
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQ 235
>gi|115474429|ref|NP_001060811.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|88911333|sp|P0C128.1|IAA25_ORYSJ RecName: Full=Auxin-responsive protein IAA25; AltName:
Full=Indoleacetic acid-induced protein 25
gi|113622780|dbj|BAF22725.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|125597174|gb|EAZ36954.1| hypothetical protein OsJ_21291 [Oryza sativa Japonica Group]
gi|215687000|dbj|BAG90814.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 546 ASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE--IQGQLRPRD--------- 594
+S+ KV ++G AVGR +DL A + YD L L+ MF + + RD
Sbjct: 140 SSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEG 199
Query: 595 ---KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 627
++ +V+ D+EGD ML GD W F VK+++I
Sbjct: 200 SKKRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|297834672|ref|XP_002885218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331058|gb|EFH61477.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + ++G S KV M+G+ +GR +DL A GY+ L + L
Sbjct: 46 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFV--KVYMEGVPIGRKLDLCAFSGYESLLENL 103
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
MF+ I G R R + + D +GD M+ GD W F + V+++ I E
Sbjct: 104 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 156
>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 322
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + L+ +D G WRF++ +
Sbjct: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYW 96
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG----ENGELRVGVRR 228
+ +++T GWS FV KRL AGD F RG G L + RR
Sbjct: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 143
>gi|294463559|gb|ADE77308.1| unknown [Picea sitchensis]
Length = 428
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 28/139 (20%)
Query: 527 KRGMADVSRKETQNKQGSAASTR--------TRTKVQMQGIAVGRAVDLTALKGYDDLFD 578
+ + + + +N+QG A + R KV M G+ +GR VD+ A Y+ L +
Sbjct: 280 RNSLGSLPKPSGENRQGGAMAGRFVQGQGNSLYVKVTMDGVPIGRKVDINAYGSYESLAE 339
Query: 579 ELEKMFEIQ--------------------GQLRPRDKWAVVFTDDEGDMMLAGDDQWPEF 618
+LE MF+ G L P + + + D EGD MLA D W F
Sbjct: 340 DLENMFQRTTENHLGAWTPLGHQHVVKPLGLLDPAADFVLTYEDSEGDCMLATDVPWKMF 399
Query: 619 CKMVKKIFIYSTEEVKNMA 637
VK++ I + A
Sbjct: 400 LHTVKRLRIMKNSGTNDFA 418
>gi|223943565|gb|ACN25866.1| unknown [Zea mays]
gi|413936690|gb|AFW71241.1| IAA7-auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 30/147 (20%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRT-------KVQMQGIAVGRAVDLTALKGYDD 575
++ +R +A SR +++ G +T K+ M GI +GR +DL+AL YD+
Sbjct: 127 VRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRAPFVKINMDGIPIGRKIDLSALGSYDE 186
Query: 576 LFDELEKMFE-----------------------IQGQLRPRDKWAVVFTDDEGDMMLAGD 612
L ++K+F I G L ++ +V+ D EGD +L GD
Sbjct: 187 LSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGD 246
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMATS 639
W F VK++ + T ++ + T+
Sbjct: 247 VPWGMFVSSVKRLRVLKTSDLSSSLTA 273
>gi|168044918|ref|XP_001774926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|16610209|dbj|BAB71766.1| IAA/AUX protein [Physcomitrella patens]
gi|162673673|gb|EDQ60192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 24/124 (19%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE--IQGQ------ 589
Q K S +S+ K+ M G+ GR VDL YD L+ LE MF+ I GQ
Sbjct: 366 VQRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRS 425
Query: 590 ----------------LRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
++ +++ D EGD ML GD W F VK++ I E
Sbjct: 426 SSSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQ 485
Query: 634 KNMA 637
N+A
Sbjct: 486 VNLA 489
>gi|297742476|emb|CBI34625.3| unnamed protein product [Vitis vinifera]
Length = 380
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + L +D G WRF++ +
Sbjct: 155 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 213
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGVRRLAHQQSSMPSSV 240
+ +++T GWS FV K+L AGD F R GE+G+ R+ + + PSS+
Sbjct: 214 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 270
>gi|449507228|ref|XP_004162969.1| PREDICTED: uncharacterized protein LOC101232454 [Cucumis sativus]
Length = 347
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA E PLD + L +D +G WRF++ +
Sbjct: 55 HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLDSSTNDKGLLLNFEDRNGKSWRFRYSYW 113
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 114 NSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRG 145
>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
Length = 420
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 98 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYW 156
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 157 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|16610207|dbj|BAB71765.1| IAA/AUX protein [Physcomitrella patens]
Length = 484
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 24/124 (19%)
Query: 538 TQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE--IQGQ------ 589
Q K S +S+ K+ M G+ GR VDL YD L+ LE MF+ I GQ
Sbjct: 347 VQRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRS 406
Query: 590 ----------------LRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
++ +++ D EGD ML GD W F VK++ I E
Sbjct: 407 SSSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQ 466
Query: 634 KNMA 637
N+A
Sbjct: 467 VNLA 470
>gi|323388567|gb|ADX60088.1| AUX/IAA transcription factor [Zea mays]
Length = 289
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 30/147 (20%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRT-------KVQMQGIAVGRAVDLTALKGYDD 575
++ +R +A SR +++ G +T K+ M GI +GR +DL+AL YD+
Sbjct: 127 VRAFRRNLATSSRASLEHQNGKKEDKPEQTTKRAPFVKINMDGIPIGRKIDLSALGSYDE 186
Query: 576 LFDELEKMFE-----------------------IQGQLRPRDKWAVVFTDDEGDMMLAGD 612
L ++K+F I G L ++ +V+ D EGD +L GD
Sbjct: 187 LSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGD 246
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMATS 639
W F VK++ + T ++ + T+
Sbjct: 247 VPWGMFVSSVKRLRVLKTSDLSSSLTA 273
>gi|365818563|gb|AEX00370.1| IAA35 [Solanum lycopersicum]
Length = 196
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 527 KRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEI 586
+RG + E G S KV+M+G+ + R +DLT Y+ L D L MF
Sbjct: 92 RRGAMNYVTVENGGVSGGRGSIYKYVKVKMEGVGIARKIDLTLFHSYNKLTDTLISMFGK 151
Query: 587 QGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEE 632
++ D + + + D EGD +LAGD W F V+++ + E+
Sbjct: 152 NKEI--GDVYKLTYQDKEGDWLLAGDVPWRTFVGSVQRLKLIRDED 195
>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 88 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYSYW 146
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGE----------NGELRVGVR---RLAHQ 232
+ +++T GWS FV KRL AGD F RG + + RV +R RLA
Sbjct: 147 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADATRDRLFIDWKRRVELRDPHRLARL 206
Query: 233 QSSMPSS 239
MP+S
Sbjct: 207 PMPMPTS 213
>gi|226493942|ref|NP_001142405.1| uncharacterized protein LOC100274580 [Zea mays]
gi|194708660|gb|ACF88414.1| unknown [Zea mays]
gi|414875917|tpg|DAA53048.1| TPA: IAA2-auxin-responsive Aux/IAA family member [Zea mays]
Length = 229
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 523 LKEVKRGMADVSRKETQNK---QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDE 579
++ +R +A S + + K Q +A K+ M G+ +GR VDLTA GY DL
Sbjct: 76 VRSFRRNLAASSSRPSSGKHTRQEGSAKDGLFVKINMDGVPIGRKVDLTAYGGYADLSAA 135
Query: 580 LEKMFEIQGQLRP-RDK--------------------WAVVFTDDEGDMMLAGDDQWPEF 618
+ K+F +G L RD+ + +V+ DDEGD +LAGD W F
Sbjct: 136 VGKLF--RGLLAAQRDRAATAGGEEEEEGEGPVIGGDYTLVYEDDEGDRVLAGDVPWEMF 193
Query: 619 CKMVKKIFIYSTEEV 633
K++ + + +V
Sbjct: 194 VATAKRLRVLKSSDV 208
>gi|255548087|ref|XP_002515100.1| hypothetical protein RCOM_1340820 [Ricinus communis]
gi|223545580|gb|EEF47084.1| hypothetical protein RCOM_1340820 [Ricinus communis]
Length = 450
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + L +D +G WRF++ +
Sbjct: 123 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKLWRFRYSYW 181
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGV 226
+ +++T GWS FV K+L AGD F R GE+G+ R+ +
Sbjct: 182 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKHRLYI 224
>gi|224033953|gb|ACN36052.1| unknown [Zea mays]
Length = 229
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 523 LKEVKRGMADVSRKETQNK---QGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDE 579
++ +R +A S + + K Q +A K+ M G+ +GR VDLTA GY DL
Sbjct: 76 VRSFRRNLAASSSRPSSGKHTRQEGSAKDGLFVKISMDGVPIGRKVDLTAYGGYADLSAA 135
Query: 580 LEKMFEIQGQLRP-RDK--------------------WAVVFTDDEGDMMLAGDDQWPEF 618
+ K+F +G L RD+ + +V+ DDEGD +LAGD W F
Sbjct: 136 VGKLF--RGLLAAQRDRAATAGGEEEEEGEGPVIGGDYTLVYEDDEGDRVLAGDVPWEMF 193
Query: 619 CKMVKKIFIYSTEEV 633
K++ + + +V
Sbjct: 194 VATAKRLRVLKSSDV 208
>gi|357139129|ref|XP_003571137.1| PREDICTED: auxin-responsive protein IAA7-like [Brachypodium
distachyon]
Length = 274
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 30/149 (20%)
Query: 523 LKEVKRGMADVSRK---ETQNKQGSAASTRTR----TKVQMQGIAVGRAVDLTALKGYDD 575
++ +R +A S K E Q+ + + + TR K+ M GI +GR +DLTAL Y+
Sbjct: 119 VRASRRNLATSSSKASLEQQHMKKAVKAEETRRAPFVKINMDGIPIGRKIDLTALDSYEK 178
Query: 576 LFDELEKMFE----------------------IQGQLRPRDKWAVVFTDDEGDMMLAGDD 613
L ++K+F I G L ++ +V+ D EGD +L GD
Sbjct: 179 LCVAVDKLFRHLLAAQNDPPAAGTECTQEVVAISGLLDGTGEYTLVYEDYEGDRVLVGDI 238
Query: 614 QWPEFCKMVKKIFIYSTEEV-KNMATSSK 641
W F VK++ + T ++ ++ TSS+
Sbjct: 239 PWGMFVSSVKRLRVLKTSDLSSSLITSSR 267
>gi|357489187|ref|XP_003614881.1| Auxin response factor [Medicago truncatula]
gi|355516216|gb|AES97839.1| Auxin response factor [Medicago truncatula]
Length = 356
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 117/304 (38%), Gaps = 61/304 (20%)
Query: 79 CRVVHIELLAEQETDEVYAQITLHPETDQTEPRSPDQCLPEPPK--QTVHSFCKILTASD 136
C + + L + TDEV+A++ L P T Q P P + + S+ K LT
Sbjct: 9 CIISAVNLFVDALTDEVFAKLLLTPLTAQEPPPPPPVVPGQEDDDGNNLVSYFKTLTT-- 66
Query: 137 TSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFRGQPRRHLLTTG 196
T T F++ + A P LD+ +Q + DL EW ++ + L TG
Sbjct: 67 TETKSVFNISHECADLIFPKLDLE---KSQIIIVTDLKSQEWGCTYV-----KNSRLRTG 118
Query: 197 WSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLAHQQSSMPSSVISSQSMHLGVLATAAH 256
WS F K+LVA D+ VF++ + VL
Sbjct: 119 WSHFRKEKKLVAKDSVVFMKNSS-----------------------------AVLNAVEF 149
Query: 257 AVKTSTLFIVYYKPRTSQFIIGLNKYLEAVHHCFSVGMRFKMRFEGEDSPERRF----TG 312
A K +VYY +A+ + GMR K+ + ++S + G
Sbjct: 150 ADKNMEFEVVYYPTVVD----------DAMKIGWESGMRVKLTLKKDESSNSKTYYHPKG 199
Query: 313 TIVGVGDFSEQWPGSKWRSLKIQWDEPATVQRPERVSPWEIEPFVASAPLNLAQPAVKSK 372
TI V ++S P WR L+ D +Q +PW +E +A L+ AQ + +
Sbjct: 200 TISTVFNYSCNVPN--WRILE---DGSKILQNTNIFNPWLVEACNMTA-LDHAQYSSPQQ 253
Query: 373 RPRS 376
P S
Sbjct: 254 IPYS 257
>gi|414872892|tpg|DAA51449.1| TPA: hypothetical protein ZEAMMB73_766126 [Zea mays]
Length = 271
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIEQLEASTNQEL 64
L+ ELWKACAGPL VP G++VYY PQGHIEQ + +EL
Sbjct: 48 LFVELWKACAGPLSCVPPLGQKVYYLPQGHIEQYRSIELEEL 89
>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
Length = 287
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 143
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|365818545|gb|AEX00361.1| IAA19 [Solanum lycopersicum]
Length = 192
Score = 58.9 bits (141), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 535 RKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQG---QLR 591
+K + N + + ++ + KV M G R VDL+ KGYD L LEK+F+ G L
Sbjct: 71 KKNSFNGREAESNNKMYVKVSMDGAPFLRKVDLSTHKGYDQLVMALEKLFDCYGIGEALE 130
Query: 592 PRDK--WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVEG 649
DK + ++ D +GD ML GD W F + K++ I E K + ++ +
Sbjct: 131 DADKSEFVPIYEDKDGDWMLVGDVPWIMFSESCKRLRIMKRSEAKVIGLGARDFLKGMSQ 190
Query: 650 E 650
E
Sbjct: 191 E 191
>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
Length = 259
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128
>gi|147838466|emb|CAN74317.1| hypothetical protein VITISV_013837 [Vitis vinifera]
Length = 206
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRD--- 594
Q K+ A RT KV M G R +DL KGY +L LE+MF+ GQ R+
Sbjct: 99 QPKKTEAEEGRTYLKVSMDGAPYLRKIDLKVYKGYPELLKALEEMFKFSVGQYSEREGYN 158
Query: 595 --KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++A + D +GD ML GD W F K++ I E + +
Sbjct: 159 GSEYAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIMKGSEARGLG 203
>gi|304322701|gb|ADL70803.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 151
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + ++G S KV M+G+ +GR +DL GY+ L + L
Sbjct: 39 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFV--KVYMEGVPIGRKLDLCVFSGYESLLENL 96
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
MF+ I G R R + + D +GD M+ GD W F + V+++ I E
Sbjct: 97 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 149
>gi|304322695|gb|ADL70800.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322711|gb|ADL70808.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 157
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + ++G S KV M+G+ +GR +DL GY+ L + L
Sbjct: 45 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFV--KVYMEGVPIGRKLDLCVFSGYESLLENL 102
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
MF+ I G R R + + D +GD M+ GD W F + V+++ I E
Sbjct: 103 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 155
>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
Length = 293
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 143
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|297843264|ref|XP_002889513.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
gi|297335355|gb|EFH65772.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 519 QNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQ--------MQGIAVGRAVDLTAL 570
NQ +K + D +K +N + S + KVQ M G+ +GR VD+ A
Sbjct: 86 NNQAMKAARAEEEDGEKKVAKNDELKDVSMKVNGKVQGLGFVKVNMDGVGIGRKVDMRAH 145
Query: 571 KGYDDLFDELEKMFEIQGQLRPRDK------------WAVVFTDDEGDMMLAGDDQWPEF 618
Y++L LE+MF R+K + + + D EGD ML GD W F
Sbjct: 146 SSYENLAQTLEEMFFGMTGTTSREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMF 205
Query: 619 CKMVKKIFIYSTEEVKNMA 637
VK++ I + E +A
Sbjct: 206 INSVKRLRIMGSSEASGLA 224
>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
Length = 400
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 143
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
Length = 400
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 143
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|298108643|gb|ADB93684.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 155
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + ++G S KV M+G+ +GR +DL GY+ L + L
Sbjct: 45 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFV--KVYMEGVPIGRKLDLCVFSGYESLLENL 102
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
MF+ I G R R + + D +GD M+ GD W F + V+++ I E
Sbjct: 103 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 155
>gi|304322697|gb|ADL70801.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + ++G S KV M+G+ +GR +DL GY+ L + L
Sbjct: 46 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFV--KVYMEGVPIGRKLDLCVFSGYESLLENL 103
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
MF+ I G R R + + D +GD M+ GD W F + V+++ I E
Sbjct: 104 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 156
>gi|15229074|ref|NP_188387.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
gi|46395870|sp|Q8H174.2|IAA31_ARATH RecName: Full=Auxin-responsive protein IAA31; AltName:
Full=Indoleacetic acid-induced protein 31
gi|9294148|dbj|BAB02050.1| unnamed protein product [Arabidopsis thaliana]
gi|15810012|gb|AAL06933.1| AT3g17600/MKP6_15 [Arabidopsis thaliana]
gi|49616379|gb|AAT67086.1| IAA31 [Arabidopsis thaliana]
gi|298108635|gb|ADB93680.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108639|gb|ADB93682.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108641|gb|ADB93683.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322703|gb|ADL70804.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322705|gb|ADL70805.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322707|gb|ADL70806.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322709|gb|ADL70807.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322713|gb|ADL70809.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322715|gb|ADL70810.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322717|gb|ADL70811.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322719|gb|ADL70812.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|332642452|gb|AEE75973.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
Length = 158
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + ++G S KV M+G+ +GR +DL GY+ L + L
Sbjct: 46 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFV--KVYMEGVPIGRKLDLCVFSGYESLLENL 103
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
MF+ I G R R + + D +GD M+ GD W F + V+++ I E
Sbjct: 104 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 156
>gi|23308285|gb|AAN18112.1| At3g17600/MKP6_15 [Arabidopsis thaliana]
Length = 158
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + ++G S KV M+G+ +GR +DL GY+ L + L
Sbjct: 46 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFV--KVYMEGVPIGRKLDLCVFSGYESLLENL 103
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFI 627
MF+ I G R R + + D +GD M+ GD W F + V+++ I
Sbjct: 104 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKI 152
>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
Length = 249
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K+LT SD V ++HA P + +L +D G W+F++ +
Sbjct: 59 HMFDKVLTPSDVGKLNRLVVPKQHAERFFP----AAGAGSTQLCFQDRGGALWQFRYSYW 114
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVR 227
G + +++T GWS FV + RL AGD F R G + R
Sbjct: 115 GSSQSYVMTKGWSRFVRAARLAAGDTVTFSRSGGGRYFIEYR 156
>gi|304322550|gb|ADL70762.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322562|gb|ADL70768.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322568|gb|ADL70771.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322572|gb|ADL70773.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 174
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ M+G+ +GR V+L+A Y L ++++F + ++ +V+ D EGD +L G
Sbjct: 82 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 141
Query: 612 DDQWPEFCKMVKKIFIYST 630
D W F VK++ + T
Sbjct: 142 DVPWEMFVSTVKRLHVLKT 160
>gi|298108637|gb|ADB93681.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 138
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + ++G S KV M+G+ +GR +DL GY+ L + L
Sbjct: 26 QDWPPIKSRLRDTLKGRRLLRRGDDTSLFV--KVYMEGVPIGRKLDLCVFSGYESLLENL 83
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
MF+ I G R R + + D +GD M+ GD W F + V+++ I E
Sbjct: 84 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 136
>gi|255574879|ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
gi|223532214|gb|EEF34018.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
Length = 318
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF------------EIQGQLRPR------D 594
KV M GI +GR VDL A Y+ L LE MF E Q +P
Sbjct: 201 KVNMDGIPIGRKVDLNAHASYETLAQTLEDMFFRSTPSINSTGGEKQQSTKPSKLLDGSS 260
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++ + + D EGD ML GD W F VK++ I T E +A
Sbjct: 261 EFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 303
>gi|75139062|sp|Q7EZD5.1|Y8577_ORYSJ RecName: Full=Putative B3 domain-containing protein Os08g0157700
gi|37806146|dbj|BAC99651.1| AP2 domain protein RAP2.8 (RAV2)-like [Oryza sativa Japonica Group]
gi|125602248|gb|EAZ41573.1| hypothetical protein OsJ_26107 [Oryza sativa Japonica Group]
Length = 287
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD V ++HA P A +L +D G WRF++ +
Sbjct: 69 HMFDKVVTPSDVGKLNRLVVPKQHAERFFPA-----AAAGTQLCFEDRAGTPWRFRYSYW 123
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVR 227
G + +++T GWS FV + RL AGD F R +G + R
Sbjct: 124 GSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYR 165
>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
Length = 316
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 108 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 166
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 167 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 198
>gi|125560208|gb|EAZ05656.1| hypothetical protein OsI_27883 [Oryza sativa Indica Group]
Length = 286
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD V ++HA P A +L +D G WRF++ +
Sbjct: 69 HMFDKVVTPSDVGKLNRLVVPKQHAERFFPA-----AAAGTQLCFEDRAGTPWRFRYSYW 123
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVR 227
G + +++T GWS FV + RL AGD F R +G + R
Sbjct: 124 GSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYR 165
>gi|449445748|ref|XP_004140634.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
[Cucumis sativus]
gi|449515921|ref|XP_004164996.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
[Cucumis sativus]
Length = 354
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + L +D HG WRF++ +
Sbjct: 92 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLILNFEDRHGKPWRFRYSYW 150
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV K+L AGD F R
Sbjct: 151 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRA 182
>gi|225451360|ref|XP_002279955.1| PREDICTED: auxin-induced protein 22D [Vitis vinifera]
gi|298204847|emb|CBI34154.3| unnamed protein product [Vitis vinifera]
Length = 199
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 539 QNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ-GQLRPRD--- 594
Q K+ A RT KV M G R +DL KGY +L LE+MF+ GQ R+
Sbjct: 92 QPKKTEAEEGRTYLKVSMDGAPYLRKIDLKVYKGYPELLKALEEMFKFSVGQYSEREGYN 151
Query: 595 --KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
++A + D +GD ML GD W F K++ I E + +
Sbjct: 152 GSEYAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIMKGSEARGLG 196
>gi|18407193|ref|NP_566089.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
thaliana]
gi|75100798|sp|O82799.1|NGA1_ARATH RecName: Full=B3 domain-containing transcription factor NGA1;
AltName: Full=Protein NGATHA 1
gi|3522951|gb|AAC34233.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|20197317|gb|AAM15018.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|26451145|dbj|BAC42676.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|30793817|gb|AAP40361.1| putative RAV B3 domain DNA binding protein [Arabidopsis thaliana]
gi|330255671|gb|AEC10765.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
thaliana]
Length = 310
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA E PLD + L +DL G WRF++ +
Sbjct: 33 HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR-----GENGELRVGVRR 228
+ +++T GWS FV K+L AGD F R G + L + RR
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 139
>gi|18420964|ref|NP_568478.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
gi|11131406|sp|Q9XFM0.1|IAA28_ARATH RecName: Full=Auxin-responsive protein IAA28; AltName:
Full=Indoleacetic acid-induced protein 28
gi|4929493|gb|AAD34019.1|AF149816_1 IAA28 [Arabidopsis thaliana]
gi|23306354|gb|AAN17404.1| putative protein [Arabidopsis thaliana]
gi|25084149|gb|AAN72186.1| putative protein [Arabidopsis thaliana]
gi|49616373|gb|AAT67083.1| IAA28 [Arabidopsis thaliana]
gi|110736579|dbj|BAF00255.1| IAA28 [Arabidopsis thaliana]
gi|284794587|gb|ADB93666.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794589|gb|ADB93667.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794591|gb|ADB93668.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322548|gb|ADL70761.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322560|gb|ADL70767.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322566|gb|ADL70770.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322570|gb|ADL70772.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|332006115|gb|AED93498.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
Length = 175
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ M+G+ +GR V+L+A Y L ++++F + ++ +V+ D EGD +L G
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 612 DDQWPEFCKMVKKIFIYST 630
D W F VK++ + T
Sbjct: 143 DVPWEMFVSTVKRLHVLKT 161
>gi|356560217|ref|XP_003548390.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Glycine max]
Length = 420
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 121 PKQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRF 180
P + H F K++T SD + ++HA + P LD + L +D +G WRF
Sbjct: 26 PAEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRF 84
Query: 181 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 85 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 121
>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
Length = 308
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 35 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYSYW 93
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG----ENGELRVGVRR 228
+ +++T GWS FV KRL AGD F RG G L + RR
Sbjct: 94 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 140
>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
Japonica Group]
gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
Length = 311
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 35 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYSYW 93
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG----ENGELRVGVRR 228
+ +++T GWS FV KRL AGD F RG G L + RR
Sbjct: 94 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 140
>gi|304322556|gb|ADL70765.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 164
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ M+G+ +GR V+L+A Y L ++++F + ++ +V+ D EGD +L G
Sbjct: 79 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 138
Query: 612 DDQWPEFCKMVKKIFIYST 630
D W F VK++ + T
Sbjct: 139 DVPWEMFVSTVKRLHVLKT 157
>gi|304322554|gb|ADL70764.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 158
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ M+G+ +GR V+L+A Y L ++++F + ++ +V+ D EGD +L G
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 612 DDQWPEFCKMVKKIFIYST 630
D W F VK++ + T
Sbjct: 126 DVPWEMFVSTVKRLHVLKT 144
>gi|227060666|gb|ACP18971.1| NGATHA1 [Arabidopsis thaliana]
Length = 310
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA E PLD + L +DL G WRF++ +
Sbjct: 33 HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR-----GENGELRVGVRR 228
+ +++T GWS FV K+L AGD F R G + L + RR
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 139
>gi|219363465|ref|NP_001136731.1| uncharacterized protein LOC100216870 [Zea mays]
gi|194696804|gb|ACF82486.1| unknown [Zea mays]
Length = 226
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M G R VDL +GY +L + LE MF ++AV + D +GD+ML GD
Sbjct: 135 KVSMDGAPYLRKVDLRMYRGYRELREALEAMFVSSSSANNLSEFAVTYEDKDGDLMLVGD 194
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMATSS 640
+ F KK+ I E + +SS
Sbjct: 195 VPFEMFASTCKKLRIMKRSEATGLGSSS 222
>gi|365818547|gb|AEX00362.1| IAA21 [Solanum lycopersicum]
Length = 213
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
++ ++ ++ K+T+ Q KV M G R +DL K Y +L +EK
Sbjct: 92 VRSYRKNTLQITTKKTEAHQDQCG---IYVKVSMDGAPFLRKIDLKMYKCYTELLKAMEK 148
Query: 583 MFEIQ-GQLRPRD-----KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
MF++ G+ R+ ++A V+ D EGD+ML GD W F K++ I E + +
Sbjct: 149 MFKLNIGEYSEREGYKGSEFAPVYEDKEGDLMLVGDVPWEMFMSSCKRLRIMKGSEARGL 208
Query: 637 ATS 639
+S
Sbjct: 209 GSS 211
>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
[Brachypodium distachyon]
Length = 413
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 98 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 156
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV KRL AGD F RG
Sbjct: 157 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|225433277|ref|XP_002285481.1| PREDICTED: auxin-responsive protein IAA13-like isoform 1 [Vitis
vinifera]
Length = 314
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPR------------DKWAVVF 600
KV M G+ +GR VDL A Y L LE MF PR ++ + +
Sbjct: 203 KVNMDGLPIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPRQSTNPSKLLDGSSEFVLTY 262
Query: 601 TDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D EGD ML GD W F VK++ I T E +A
Sbjct: 263 EDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLA 299
>gi|5091628|gb|AAD39616.1|AC007454_15 End is cut off, partial [Arabidopsis thaliana]
Length = 33
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 26/32 (81%)
Query: 23 LYRELWKACAGPLVEVPRNGERVYYFPQGHIE 54
+Y +LW CAGPL +P+ GE+VYYFPQGHIE
Sbjct: 1 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIE 32
>gi|255555825|ref|XP_002518948.1| transcription factor, putative [Ricinus communis]
gi|223541935|gb|EEF43481.1| transcription factor, putative [Ricinus communis]
Length = 406
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 123 QTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKH 182
Q H F K++T SD + ++HA + P LD + L +D G WRF++
Sbjct: 98 QKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLLLNFEDKTGKAWRFRY 156
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ + +++T GWS FV K+L AGD F RG
Sbjct: 157 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRG 191
>gi|304322558|gb|ADL70766.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 149
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ M+G+ +GR V+L+A Y L ++++F + ++ +V+ D EGD +L G
Sbjct: 64 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 123
Query: 612 DDQWPEFCKMVKKIFIYST 630
D W F VK++ + T
Sbjct: 124 DVPWEMFVSTVKRLHVLKT 142
>gi|284794585|gb|ADB93665.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794593|gb|ADB93669.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 168
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ M+G+ +GR V+L+A Y L ++++F + ++ +V+ D EGD +L G
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 612 DDQWPEFCKMVKKIFIYST 630
D W F VK++ + T
Sbjct: 143 DVPWEMFVSTVKRLHVLKT 161
>gi|242042451|ref|XP_002468620.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
gi|241922474|gb|EER95618.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
Length = 330
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD L+ +D G WRF++ +
Sbjct: 37 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 95
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG----ENGELRVGVRR 228
+ +++T GWS FV KRL AGD F RG G L + RR
Sbjct: 96 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGDAARGRLFIDWRR 142
>gi|118484337|gb|ABK94046.1| unknown [Populus trichocarpa]
Length = 303
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF--------EIQGQLRPRDKWA------- 597
KV M G+ +GR VDL A Y+ L LE+MF I GQ +P K++
Sbjct: 187 KVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQ-KPLSKFSKLLDGSS 245
Query: 598 ---VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + D EGD ML GD W F VK++ I T E +A
Sbjct: 246 EFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 288
>gi|297789622|ref|XP_002862757.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
lyrata]
gi|297308467|gb|EFH39015.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
lyrata]
Length = 312
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA E PLD + L +DL G WRF++ +
Sbjct: 35 HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW 93
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR-----GENGELRVGVRR 228
+ +++T GWS FV K+L AGD F R G + L + RR
Sbjct: 94 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 141
>gi|414867524|tpg|DAA46081.1| TPA: hypothetical protein ZEAMMB73_334184 [Zea mays]
Length = 273
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQE-----------LAAKDLH 174
H F K++T SD + ++HA P LD + A + L+ +D
Sbjct: 28 HMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAASASASAGGGKAGLVLSFEDRA 87
Query: 175 GYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
G WRF++ + + +++T GWS FV KRL AGD +F RG
Sbjct: 88 GKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARG 130
>gi|297824777|ref|XP_002880271.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
lyrata]
gi|297326110|gb|EFH56530.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA E PLD + L +DL G WRF++ +
Sbjct: 34 HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW 92
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR-----GENGELRVGVRR 228
+ +++T GWS FV K+L AGD F R G + L + RR
Sbjct: 93 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 140
>gi|226501382|ref|NP_001147149.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195607742|gb|ACG25701.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 29/163 (17%)
Query: 499 TTGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQ--------NKQGSAASTRT 550
T G++G K AR+A+ ++ +R +A S K ++ N+ SA +
Sbjct: 54 TKGSNGFK--ARSAAAAPVVGWPPVRAFRRNLASASSKPSREPPPSHRGNEPASAGAGGN 111
Query: 551 R---TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE----------------IQGQLR 591
+ KV M G+ +GR +DL GYD L ++ +F + G L
Sbjct: 112 KGLFVKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLAAQTSGPDGERQAVAGILN 171
Query: 592 PRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVK 634
++ +V+ DDEGD ML GD W F +++ + + ++
Sbjct: 172 GGGEYTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLN 214
>gi|304322552|gb|ADL70763.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322564|gb|ADL70769.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 151
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAG 611
K+ M+G+ +GR V+L+A Y L ++++F + ++ +V+ D EGD +L G
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 612 DDQWPEFCKMVKKIFIYST 630
D W F VK++ + T
Sbjct: 126 DVPWEMFVSTVKRLHVLKT 144
>gi|350539547|ref|NP_001234694.1| AUX/IAA 2 [Solanum lycopersicum]
gi|338969604|gb|AEJ33647.1| AUX/IAA 12 [Solanum lycopersicum]
Length = 189
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 523 LKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEK 582
++ ++ ++ K+T+ Q KV M G R +DL K Y +L +EK
Sbjct: 68 VRSYRKNTLQITTKKTEAHQDQCG---IYVKVSMDGAPFLRKIDLKMYKCYTELLKAMEK 124
Query: 583 MFEIQ-GQLRPRD-----KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNM 636
MF++ G+ R+ ++A V+ D EGD+ML GD W F K++ I E + +
Sbjct: 125 MFKLNIGEYSEREGYKGSEFAPVYEDKEGDLMLVGDVPWEMFMSSCKRLRIMKGSEARGL 184
Query: 637 ATS 639
+S
Sbjct: 185 GSS 187
>gi|304322699|gb|ADL70802.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 521 QDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDEL 580
QD +K + D + +G S KV M+G+ +GR +DL GY+ L + L
Sbjct: 46 QDWPPIKSRLRDTLKGRRLISRGDDTSLFV--KVYMEGVPIGRKLDLCVFSGYESLLENL 103
Query: 581 EKMFE---IQGQLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
MF+ I G R R + + D +GD M+ GD W F + V+++ I E
Sbjct: 104 SHMFDTSIICGN-RDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITRPE 156
>gi|224107521|ref|XP_002314509.1| predicted protein [Populus trichocarpa]
gi|222863549|gb|EEF00680.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF--------EIQGQLRPRDKWA------- 597
KV M G+ +GR VDL A Y+ L LE+MF I GQ +P K++
Sbjct: 160 KVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQ-KPLSKFSKLLDGSS 218
Query: 598 ---VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + D EGD ML GD W F VK++ I T E +A
Sbjct: 219 EFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLA 261
>gi|291197510|emb|CAZ68123.1| NGATHA1 [Arabidopsis halleri subsp. halleri]
Length = 313
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA E PLD + L +DL G WRF++ +
Sbjct: 35 HMFDKVVTPSDVGKLNRLVIPKQHA-ERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYW 93
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR-----GENGELRVGVRR 228
+ +++T GWS FV K+L AGD F R G + L + RR
Sbjct: 94 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 141
>gi|242062916|ref|XP_002452747.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
gi|241932578|gb|EES05723.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
Length = 434
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + +++A + P LD L+ +D G WRF++ +
Sbjct: 101 HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYW 159
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELR 223
+ +++T GWS FV KRLVAGD F R + R
Sbjct: 160 NSSQSYVMTKGWSRFVKEKRLVAGDTVSFSRAAAEDAR 197
>gi|308080706|ref|NP_001183918.1| uncharacterized protein LOC100502511 [Zea mays]
gi|238015438|gb|ACR38754.1| unknown [Zea mays]
gi|413938267|gb|AFW72818.1| hypothetical protein ZEAMMB73_941356 [Zea mays]
Length = 422
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + +++A + P LD L+ +D G WRF++ +
Sbjct: 99 HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYW 157
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELR 223
+ +++T GWS FV KRLVAGD F R + R
Sbjct: 158 NSSQSYVMTKGWSRFVKEKRLVAGDTVSFSRAAAEDAR 195
>gi|25296228|pir||T52144 auxin-induced protein IAA18 [imported] - Arabidopsis thaliana
(fragment)
gi|2618725|gb|AAB84355.1| IAA18, partial [Arabidopsis thaliana]
Length = 236
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 508 SARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDL 567
S++ +D S LK K D ++ +QG K+ M G+ +GR VDL
Sbjct: 85 SSKLGNDSTTSNGVTLKNQK---CDAAKTTEPKRQGGMF-----VKINMYGVPIGRKVDL 136
Query: 568 TALKGYDDLFDELEKMFE------------------IQGQLRPRDKWAVVFTDDEGDMML 609
+A Y+ L ++K+F I G L ++ + + D+EGD ML
Sbjct: 137 SAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKML 196
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
GD W F VK++ + T E+ + T
Sbjct: 197 VGDVPWQMFVSSVKRLRVIKTSEISSALT 225
>gi|115489446|ref|NP_001067210.1| Os12g0601400 [Oryza sativa Japonica Group]
gi|88911338|sp|P0C133.1|IAA31_ORYSJ RecName: Full=Auxin-responsive protein IAA31; AltName:
Full=Indoleacetic acid-induced protein 31
gi|77556998|gb|ABA99794.1| Auxin-induced protein 22D, putative, expressed [Oryza sativa
Japonica Group]
gi|113649717|dbj|BAF30229.1| Os12g0601400 [Oryza sativa Japonica Group]
gi|125537298|gb|EAY83786.1| hypothetical protein OsI_39002 [Oryza sativa Indica Group]
gi|125579977|gb|EAZ21123.1| hypothetical protein OsJ_36766 [Oryza sativa Japonica Group]
gi|215706956|dbj|BAG93416.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 197
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 537 ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-------EIQGQ 589
ETQ K+ A + KV M G R +DL KGY +L + LE MF
Sbjct: 87 ETQQKEDVAGAGGLFVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSGGAAADAA 146
Query: 590 LRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATS 639
+ P D +AV + D +GD+ML GD + F K++ I E + + +
Sbjct: 147 VNPSD-FAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGLGAT 195
>gi|356522464|ref|XP_003529866.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Glycine
max]
Length = 421
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K++T SD + ++HA + P LD + L +D +G WRF++ +
Sbjct: 59 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRYSYW 117
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGEL 222
+ +++T GWS FV K+L AGD F RG GEL
Sbjct: 118 NSSQSYVMTKGWSRFVKEKKLDAGDMVSFQRGV-GEL 153
>gi|399894421|gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
Length = 306
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 511 AASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTAL 570
A ++ D + + K+ + +V K T ++G KV M GI +GR VDL A
Sbjct: 154 ARAEDDTAVGEKSKDTSKKKINVGSKTTVKEKGHLGFV----KVNMDGIPIGRKVDLNAH 209
Query: 571 KGYDDLFDELEKMF-----EIQGQ----------LRPRDKWAVVFTDDEGDMMLAGDDQW 615
Y+ L LE+MF I G L ++ + + D EGD ML GD W
Sbjct: 210 SCYETLAQTLEEMFISPTTAIGGDTEQAKKPSKLLDGSSEFVLTYEDKEGDWMLVGDVPW 269
Query: 616 PEFCKMVKKIFIYSTEEVKNMA 637
F VK++ I T E +A
Sbjct: 270 GMFLGSVKRLRIMRTSEANGLA 291
>gi|312282573|dbj|BAJ34152.1| unnamed protein product [Thellungiella halophila]
Length = 246
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 53/124 (42%), Gaps = 20/124 (16%)
Query: 534 SRKETQNKQGSAASTRTR--TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF------- 584
+R+E A R KV M GI +GR +DL A K Y+ L LE+MF
Sbjct: 119 TRQEVNKNITDATKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSSTLEEMFLKPKTGS 178
Query: 585 ---------EIQGQLRPRDKWAVVFT--DDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
E Q ++ P +V T D EGD ML GD W F VK++ I T E
Sbjct: 179 STRETDGHVEKQLKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVKRLRIMKTSEA 238
Query: 634 KNMA 637
A
Sbjct: 239 TGTA 242
>gi|21618019|gb|AAM67069.1| early auxin-induced protein IAA19 [Arabidopsis thaliana]
Length = 197
Score = 57.0 bits (136), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 500 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT---RTKVQM 556
+G G A +D A+++Q + G V +N A++T+ KV M
Sbjct: 49 SGVVSSGGDAEKVNDSPAAKSQVV-----GWPPVCSYRKKNSCKEASTTKVGLGYVKVSM 103
Query: 557 QGIAVGRAVDLTALKGYDDLFDELEKMFEIQG---QLRPRD--KWAVVFTDDEGDMMLAG 611
G+ R +DL + +GYDDL L+K+F +G L+ D ++ ++ D +GD MLAG
Sbjct: 104 DGVPYLRKMDLGSSQGYDDLAFSLDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAG 163
Query: 612 DDQWPEFCKMVKKIFI 627
D W F + K++ I
Sbjct: 164 DXPWGMFLESCKRLRI 179
>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K+LT SD + ++HA P T L +D +G WRF++ +
Sbjct: 32 HMFDKVLTPSDVGKLNRLVIPKQHAENYFPLEGNQNGT---VLDFQDRNGKMWRFRYSYW 88
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 217
+ +++T GWS FV K+L AGD F RG
Sbjct: 89 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFHRG 120
>gi|302398577|gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
Length = 306
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-----EIQGQ----------LRPRDKWA 597
KV M GI +GR VDL A Y+ L LE+MF I G L ++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTTIGGDTEQAKKPSKLLDGSSEFV 251
Query: 598 VVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + D EGD ML GD W F VK++ I T E +A
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLA 291
>gi|356556539|ref|XP_003546582.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 320
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 23/113 (20%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE-----------------------IQG 588
K+ M G+ +GR VDL A Y++L ++++F I G
Sbjct: 197 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 256
Query: 589 QLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSK 641
L ++ +V+ D+EGD ML GD W F VK++ + + E+ SK
Sbjct: 257 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 309
>gi|358347636|ref|XP_003637862.1| Maturase K [Medicago truncatula]
gi|355503797|gb|AES85000.1| Maturase K [Medicago truncatula]
Length = 624
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 30/159 (18%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQELAAKDLHGYEWRFKHIFR 185
H F K +T SD + ++HA + P LD T L +D +G WRF++ +
Sbjct: 170 HMFDKAVTPSDVGKLNRLVIPKQHAEKYFP-LDSTSNEKGLLLNFEDRNGKLWRFRYSYW 228
Query: 186 GQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGEL---RVGV---RRLAHQQSSM-PS 238
+ +++T GWS FV K+L AGD F RG GEL R+ + RR H ++ PS
Sbjct: 229 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGV-GELFRHRLFIDWRRRSNHNHHTIDPS 287
Query: 239 SVISSQSMHLGVLATAAHAVKTSTLFIVYYKPRTSQFII 277
S +TLF ++ P Q+ I
Sbjct: 288 S---------------------ATLFTPFFLPNQQQYSI 305
>gi|297817532|ref|XP_002876649.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
lyrata]
gi|297322487|gb|EFH52908.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
lyrata]
Length = 304
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 126 HSFCKILTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQE---LAAKDLHGYEWRFKH 182
H F K++T SD + ++HA P LD + + L +D G WRF++
Sbjct: 21 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDNNKGLLLNFEDRSGNSWRFRY 79
Query: 183 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR--GENGELRVGVRR 228
+ + +++T GWS FV K+L AGD F R G +L + RR
Sbjct: 80 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSGNKDKLYIDWRR 127
>gi|21594025|gb|AAM65943.1| auxin regulated protein IAA18, putative [Arabidopsis thaliana]
Length = 267
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 18/104 (17%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE------------------IQGQLRPRD 594
K+ M G+ +GR VDL+A Y+ L ++K+F I G L
Sbjct: 153 KINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNG 212
Query: 595 KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
++ + + D+EGD ML GD W F VK++ + T E+ + T
Sbjct: 213 EYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEISSALT 256
>gi|356533499|ref|XP_003535301.1| PREDICTED: auxin-responsive protein IAA30-like [Glycine max]
Length = 177
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF--------EIQGQLRPRDKWAVVFTDDE 604
KV M+GI +GR ++L A GY +L LE+MF E+ G ++P + + D E
Sbjct: 89 KVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDG-VQPERCHVLTYEDGE 147
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTE 631
GD+++ GD W F VK++ I E
Sbjct: 148 GDLIMVGDVPWEMFLSAVKRLKITRVE 174
>gi|259490232|ref|NP_001159169.1| hypothetical protein [Zea mays]
gi|223942437|gb|ACN25302.1| unknown [Zea mays]
gi|414871828|tpg|DAA50385.1| TPA: hypothetical protein ZEAMMB73_712300 [Zea mays]
Length = 162
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%)
Query: 537 ETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKW 596
T + +A + KV M G R VDL +GY +L + LE +F ++
Sbjct: 55 NTTSSSSAAVVVGSFVKVSMDGAPYLRKVDLRMYRGYRELREALEALFVSSSSANNLSEF 114
Query: 597 AVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSS 640
AV + D +GD+ML GD + F KK+ I E + +SS
Sbjct: 115 AVTYEDKDGDLMLVGDVPFEMFASTCKKLRIMKRSEATGLGSSS 158
>gi|326530302|dbj|BAJ97577.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-EIQGQLRPRDKWAVVFTDDEGDMMLA 610
KV+ +G A+GR VDL+ Y DL L +MF + G L + V + D +GD ML
Sbjct: 98 VKVRKEGAAIGRKVDLSLHGSYADLLATLARMFPDPAGCLHAESEMVVTYEDADGDWMLV 157
Query: 611 GDDQWPEFCKMVKKIFI 627
GD W +F + VK++ I
Sbjct: 158 GDVPWDDFARSVKRLKI 174
>gi|224099985|ref|XP_002311698.1| predicted protein [Populus trichocarpa]
gi|222851518|gb|EEE89065.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF--------EIQGQLRPRDK-------- 595
KV M GI +GR VDL A Y+ L LE+MF I G+ R K
Sbjct: 140 VKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKRQVTKPSKLLDGL 199
Query: 596 --WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + + D EGD ML GD W F VK++ I T E +A
Sbjct: 200 SEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLA 243
>gi|147815559|emb|CAN70530.1| hypothetical protein VITISV_010218 [Vitis vinifera]
Length = 192
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 535 RKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDL---FDELEKMFEIQGQLR 591
RK + N + +T+ KV M G R +DL++ +GY +L F+EL F I L+
Sbjct: 71 RKNSFNDKDRTEATKMYVKVSMDGAPFLRKIDLSSHQGYFNLVTAFEELFGCFGIGEALK 130
Query: 592 PRD--KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D ++ ++ D +GD ML GD W F + K++ I E KN
Sbjct: 131 DADSSEYIPIYEDKDGDWMLVGDVPWEMFIESCKRLRIKKKSETKNFG 178
>gi|15218080|ref|NP_175607.1| auxin-responsive protein IAA18 [Arabidopsis thaliana]
gi|11386629|sp|O24408.2|IAA18_ARATH RecName: Full=Auxin-responsive protein IAA18; AltName:
Full=Indoleacetic acid-induced protein 18
gi|9802794|gb|AAF99863.1|AC015448_13 IAA18 [Arabidopsis thaliana]
gi|14194115|gb|AAK56252.1|AF367263_1 At1g51950/T14L22_14 [Arabidopsis thaliana]
gi|15810073|gb|AAL06962.1| At1g51950/T14L22_14 [Arabidopsis thaliana]
gi|49616369|gb|AAT67081.1| IAA18 [Arabidopsis thaliana]
gi|332194617|gb|AEE32738.1| auxin-responsive protein IAA18 [Arabidopsis thaliana]
Length = 267
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 25/149 (16%)
Query: 508 SARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRTRTKVQMQGIAVGRAVDL 567
S++ +D S LK K D + K T+ K+ K+ M G+ +GR VDL
Sbjct: 115 SSKLGNDSTTSNGVTLKNQK---CDAAAKTTEPKRQGGMFV----KINMYGVPIGRKVDL 167
Query: 568 TALKGYDDLFDELEKMFE------------------IQGQLRPRDKWAVVFTDDEGDMML 609
+A Y+ L ++K+F I G L ++ + + D+EGD ML
Sbjct: 168 SAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKML 227
Query: 610 AGDDQWPEFCKMVKKIFIYSTEEVKNMAT 638
GD W F VK++ + T E+ + T
Sbjct: 228 VGDVPWQMFVSSVKRLRVIKTSEISSALT 256
>gi|223944691|gb|ACN26429.1| unknown [Zea mays]
gi|414871829|tpg|DAA50386.1| TPA: hypothetical protein ZEAMMB73_712300 [Zea mays]
Length = 226
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQLRPRDKWAVVFTDDEGDMMLAGD 612
KV M G R VDL +GY +L + LE +F ++AV + D +GD+ML GD
Sbjct: 135 KVSMDGAPYLRKVDLRMYRGYRELREALEALFVSSSSANNLSEFAVTYEDKDGDLMLVGD 194
Query: 613 DQWPEFCKMVKKIFIYSTEEVKNMATSS 640
+ F KK+ I E + +SS
Sbjct: 195 VPFEMFASTCKKLRIMKRSEATGLGSSS 222
>gi|297747673|gb|ADB93649.2| indole-3-acetic acid inducible 19 [Arabidopsis thaliana]
Length = 187
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 500 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT---RTKVQM 556
+G G A +D A+++Q + G V +N A++T+ KV M
Sbjct: 49 SGVVSSGGDAEKVNDSPAAKSQVV-----GWPPVCSYRKKNSCKEASTTKVGLGYVKVSM 103
Query: 557 QGIAVGRAVDLTALKGYDDLFDELEKMFEIQG---QLRPRD--KWAVVFTDDEGDMMLAG 611
G+ R +DL + +GYDDL L+K+F +G L+ D ++ ++ D +GD MLAG
Sbjct: 104 DGVPYLRKMDLGSSQGYDDLAFSLDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAG 163
Query: 612 DDQWPEFCKMVKKIFI 627
D W F + K++ I
Sbjct: 164 DVPWGMFLESCKRLRI 179
>gi|224134096|ref|XP_002321735.1| predicted protein [Populus trichocarpa]
gi|224134104|ref|XP_002321737.1| predicted protein [Populus trichocarpa]
gi|222868731|gb|EEF05862.1| predicted protein [Populus trichocarpa]
gi|222868733|gb|EEF05864.1| predicted protein [Populus trichocarpa]
Length = 93
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 554 VQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQGQL-RPRDKWAVVFTDDEGDMMLAGD 612
V QG AVGR++D T GY++L +L+++ E G+L P +V +DEGDM+L GD
Sbjct: 30 VHKQGTAVGRSLDPTKFNGYNELTTKLDQILEFNGKLAAPNKDRLIVSINDEGDMILVGD 89
Query: 613 DQW 615
W
Sbjct: 90 YPW 92
>gi|225437764|ref|XP_002281145.1| PREDICTED: auxin-responsive protein IAA4 [Vitis vinifera]
gi|297744081|emb|CBI37051.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF-------EIQGQLRPRDKWAVVFTDDEG 605
KV M+GI +GR +DL A GY L L+ MF E+ G L + + D EG
Sbjct: 88 KVYMEGIPIGRKLDLFAHDGYHALIRTLDHMFSTTILWAEVDGVLHSEKCHVLTYEDKEG 147
Query: 606 DMMLAGDDQWPEFCKMVKKIFI 627
D M+ GD W F VK++ I
Sbjct: 148 DWMMVGDVPWELFLTTVKRLKI 169
>gi|429326560|gb|AFZ78620.1| hypothetical protein [Populus tomentosa]
Length = 291
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMF--------EIQGQLRPRDK-------- 595
KV M GI +GR VDL A Y+ L LE+MF I G+ R K
Sbjct: 140 VKVNMDGIPIGRKVDLNAHACYETLAQALEEMFLRSATTINSIGGEKRQVTKPSKLLDGL 199
Query: 596 --WAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
+ + + D EGD ML GD W F VK++ I T E +
Sbjct: 200 SEFVLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLG 243
>gi|359482957|ref|XP_003632865.1| PREDICTED: auxin-induced protein 22A-like [Vitis vinifera]
gi|313765829|gb|ADR80322.1| indole-3-acetic acid-induced protein 19 [Vitis vinifera]
Length = 192
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 535 RKETQNKQGSAASTRTRTKVQMQGIAVGRAVDLTALKGYDDL---FDELEKMFEIQGQLR 591
RK + N + +T+ KV M G R +DL++ +GY +L F+EL F I L+
Sbjct: 71 RKNSFNDKDRTEATKMYVKVSMDGAPFLRKIDLSSHQGYFNLVTAFEELFGCFGIGEALK 130
Query: 592 PRD--KWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMA 637
D ++ ++ D +GD ML GD W F + K++ I E KN
Sbjct: 131 DADSSEYIPIYEDKDGDWMLVGDVPWEMFIESCKRLRIKKKSETKNFG 178
>gi|356501831|ref|XP_003519727.1| PREDICTED: auxin-responsive protein IAA30-like [Glycine max]
Length = 180
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF--------EIQGQLRPRDKWAVVFTDDE 604
KV M+GI +GR ++L A GY +L LE+MF E+ G ++P + + D E
Sbjct: 92 KVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDG-VQPDRCHVLTYEDGE 150
Query: 605 GDMMLAGDDQWPEFCKMVKKIFIYSTE 631
GD+++ GD W F VK++ I E
Sbjct: 151 GDLIMVGDVPWEMFLSAVKRLKITRVE 177
>gi|357454777|ref|XP_003597669.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355486717|gb|AES67920.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 269
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 24/105 (22%)
Query: 553 KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE------------------------IQG 588
K+ M G+ +GR VDL A YD+L ++ +F I G
Sbjct: 151 KINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITG 210
Query: 589 QLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEV 633
L ++ +V+ D+EGD ML GD W F VK++ + + E+
Sbjct: 211 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTEL 255
>gi|297747665|gb|ADB93645.2| indole-3-acetic acid inducible 19 [Arabidopsis thaliana]
Length = 187
Score = 56.2 bits (134), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 500 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT---RTKVQM 556
+G G A +D A++ Q + G V +N A++T+ KV M
Sbjct: 49 SGVVSSGGDAEKVNDSPAAKTQVV-----GWPPVCSYRKKNSCKEASTTKVGLGYVKVSM 103
Query: 557 QGIAVGRAVDLTALKGYDDLFDELEKMFEIQG---QLRPRD--KWAVVFTDDEGDMMLAG 611
G+ R +DL + +GYDDL L+K+F +G L+ D ++ ++ D +GD MLAG
Sbjct: 104 DGVPYLRKMDLGSSQGYDDLAFSLDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAG 163
Query: 612 DDQWPEFCKMVKKIFI 627
D W F + K++ I
Sbjct: 164 DVPWGMFLESCKRLRI 179
>gi|297747667|gb|ADB93646.2| indole-3-acetic acid inducible 19 [Arabidopsis thaliana]
Length = 187
Score = 56.2 bits (134), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 500 TGTSGVKGSARAASDFDASQNQDLKEVKRGMADVSRKETQNKQGSAASTRT---RTKVQM 556
+G G A +D A+++Q + G V +N A++T+ KV M
Sbjct: 49 SGVVSSGGDAEKVNDSPAAKSQVV-----GWPPVCSYRKKNSCKEASTTKVGLGYVKVSM 103
Query: 557 QGIAVGRAVDLTALKGYDDLFDELEKMFEIQG---QLRPRD--KWAVVFTDDEGDMMLAG 611
G+ R +DL + +GYDDL L+K+F +G L+ D ++ ++ D +GD MLAG
Sbjct: 104 DGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAG 163
Query: 612 DDQWPEFCKMVKKIFI 627
D W F + K++ I
Sbjct: 164 DVPWGMFLESCKRLRI 179
>gi|414877122|tpg|DAA54253.1| TPA: hypothetical protein ZEAMMB73_710760 [Zea mays]
Length = 198
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 14/102 (13%)
Query: 544 SAASTRTRT---KVQMQGIAVGRAVDLTALKGYDDLFDELEKMFEIQ---------GQLR 591
+A++ R RT KV M+G+ +GR +D+ L GY L +L MF+ Q
Sbjct: 95 TASARRRRTLFVKVYMEGVPIGRKLDMLLLDGYSSLLAKLCHMFKASITYADAVEYHQRV 154
Query: 592 PRDKWAVVFT--DDEGDMMLAGDDQWPEFCKMVKKIFIYSTE 631
P +K A V T D +GD M+ GD W F VKK+ I T+
Sbjct: 155 PHEKAAHVLTYEDHDGDWMMVGDVPWELFLGSVKKLRIARTD 196
>gi|356550493|ref|XP_003543621.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 346
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 552 TKVQMQGIAVGRAVDLTALKGYDDLFDELEKMFE-----------------------IQG 588
K+ M G+ +GR VDL A Y++L ++++F I G
Sbjct: 223 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 282
Query: 589 QLRPRDKWAVVFTDDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIASSVE 648
L ++ +V+ D+EGD ML GD W F VK++ + + E+ SK
Sbjct: 283 LLDGSGEFTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSKQ------ 336
Query: 649 GEGTAISLDSELK 661
I LDS +K
Sbjct: 337 ---DKIPLDSAMK 346
>gi|334186997|ref|NP_001190859.1| auxin-responsive protein IAA11 [Arabidopsis thaliana]
gi|332660117|gb|AEE85517.1| auxin-responsive protein IAA11 [Arabidopsis thaliana]
Length = 250
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 547 STRTRT----KVQMQGIAVGRAVDLTALKGYDDLFDELEKMF----------EIQGQLR- 591
ST+ R KV M GI +GR +DL A K Y+ L + LE+MF E G +
Sbjct: 130 STKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMET 189
Query: 592 -----PRDKWAVVFT--DDEGDMMLAGDDQWPEFCKMVKKIFIYSTEEVKNMATSSKPIA 644
P +V T D EGD ML GD W F V+++ I T E T + I
Sbjct: 190 PVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKGTFTDSIK 249
Query: 645 S 645
S
Sbjct: 250 S 250
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,581,731,482
Number of Sequences: 23463169
Number of extensions: 454364680
Number of successful extensions: 1164956
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 973
Number of HSP's that attempted gapping in prelim test: 1158906
Number of HSP's gapped (non-prelim): 3012
length of query: 664
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 515
effective length of database: 8,863,183,186
effective search space: 4564539340790
effective search space used: 4564539340790
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)