Query 006029
Match_columns 664
No_of_seqs 152 out of 986
Neff 8.1
Searched_HMMs 46136
Date Thu Mar 28 17:20:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006029.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006029hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1300 Vesicle trafficking pr 100.0 1E-100 3E-105 812.8 53.4 578 17-655 2-587 (593)
2 PF00995 Sec1: Sec1 family; I 100.0 7.7E-90 1.7E-94 785.3 45.6 540 43-649 1-564 (564)
3 KOG1302 Vacuolar sorting prote 100.0 4.1E-84 8.9E-89 689.1 43.7 561 11-649 10-599 (600)
4 KOG1299 Vacuolar sorting prote 100.0 2.2E-83 4.7E-88 657.6 45.0 531 20-651 5-547 (549)
5 COG5158 SEC1 Proteins involved 100.0 1.1E-82 2.3E-87 690.6 51.1 565 17-655 3-580 (582)
6 KOG1301 Vesicle trafficking pr 100.0 4.4E-81 9.6E-86 648.1 43.5 570 14-656 8-618 (621)
7 PRK05581 ribulose-phosphate 3- 48.3 22 0.00047 35.2 4.1 44 605-652 171-214 (220)
8 PRK08883 ribulose-phosphate 3- 43.9 26 0.00057 35.0 3.8 45 604-652 167-211 (220)
9 PF14071 YlbD_coat: Putative c 42.0 23 0.0005 31.8 2.7 14 306-319 32-45 (124)
10 cd00564 TMP_TenI Thiamine mono 41.9 28 0.0006 33.4 3.6 45 604-652 150-194 (196)
11 PLN02334 ribulose-phosphate 3- 41.4 25 0.00055 35.2 3.4 44 605-652 175-218 (229)
12 PRK00043 thiE thiamine-phospha 33.2 41 0.00088 32.9 3.3 43 605-651 161-203 (212)
13 TIGR00693 thiE thiamine-phosph 29.2 61 0.0013 31.3 3.7 42 605-650 153-194 (196)
14 TIGR01163 rpe ribulose-phospha 28.8 66 0.0014 31.3 4.0 44 605-652 166-209 (210)
15 PTZ00170 D-ribulose-5-phosphat 25.9 64 0.0014 32.4 3.2 45 604-652 173-217 (228)
16 PF12327 FtsZ_C: FtsZ family, 24.1 1.3E+02 0.0027 25.7 4.3 37 601-637 35-76 (95)
17 cd00429 RPE Ribulose-5-phospha 23.5 99 0.0022 30.0 4.1 44 605-652 167-210 (211)
18 PRK08745 ribulose-phosphate 3- 22.5 1.1E+02 0.0024 30.7 4.1 46 603-652 170-215 (223)
19 PRK13307 bifunctional formalde 22.3 86 0.0019 34.2 3.6 44 603-650 329-372 (391)
20 TIGR03128 RuMP_HxlA 3-hexulose 22.3 96 0.0021 30.2 3.7 42 605-650 159-200 (206)
21 PRK10039 hypothetical protein; 22.0 1.6E+02 0.0035 26.6 4.6 40 611-650 81-125 (127)
22 cd04726 KGPDC_HPS 3-Keto-L-gul 21.7 1.1E+02 0.0025 29.5 4.1 45 603-651 157-201 (202)
No 1
>KOG1300 consensus Vesicle trafficking protein Sec1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-100 Score=812.76 Aligned_cols=578 Identities=43% Similarity=0.706 Sum_probs=496.2
Q ss_pred hHHHHHHHHHHHHHHHhccCCCCCCCeEEEEEeccchhHhhhccCchhhhhcCceEEeeccCCCCCCCCCeEEEEecCCH
Q 006029 17 NFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTK 96 (664)
Q Consensus 17 ~l~~~~~~~l~~~~l~~v~~~~~~~~~KvLilD~~~~~ils~~~~~s~L~~~gV~~i~~l~~~R~~~~~~~aIy~i~Pt~ 96 (664)
+|+++.+++++..+++ +. ....|||||+|+.+++++|+||+|++++++||++++.|+++|+|+|.++|||||+|+.
T Consensus 2 ~l~~l~~~kil~~v~~-~~---k~g~wkVLi~Dk~~~~ilss~~km~~i~~egIt~ve~i~~~ReP~~SmeaIY~i~pt~ 77 (593)
T KOG1300|consen 2 GLKELVKKKILEDVLR-VE---KKGEWKVLVVDKLTMRILSSCCKMSEILEEGITIVEDINKRREPLPSMEAIYFITPTE 77 (593)
T ss_pred chHHHHHHHHHHHhcc-cC---CCCeeEEEEecchHHHHHHHHHHHHHHHHcCceeeeeccccCCCCCcceeEEEecCch
Confidence 5789999999988888 33 2237999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCcceEEEEecCCCCHHHHHHHHhcCCccccccceeEEecceEeccCCceeeCCcchhhhhcCCCC
Q 006029 97 ENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEE 176 (664)
Q Consensus 97 ~~i~~i~~d~~~~~~~y~~~~i~F~~~~~~~~le~la~~~~~~~~i~~i~e~~~df~pld~~lfsl~~~~~~~~l~~~~~ 176 (664)
+++++++.||....|.|+.+||||+..||+.+++.+.+ ..+...|.++.|++++|+|+|+++|+++.|++|..+|.+.
T Consensus 78 ~~V~~~i~Df~~~~~~Y~~ahifF~~~c~~~lf~~l~k-s~~a~~i~tlkeinl~F~p~ESqvF~~~~~~~~~~~y~~~- 155 (593)
T KOG1300|consen 78 ESVDCLIKDFEGRSPLYKAAHIFFLDPCPDPLFNKLSK-SRAAKKIKTLKEINLAFIPYESQVFTLDSPDAFLQLYSPD- 155 (593)
T ss_pred hhHHHHHHhhcccCcccceEEEEEcCCCCHHHHHHHHh-hhHhhhhhhheecccccceecceeeeecChhhHHHhcCch-
Confidence 99999999997667899999999999999999999974 4567889999999999999999999999999999999975
Q ss_pred CccchhHHHHHHHHHHHHHHHHhCCccEEEEccCCCccccccccccchHHHHHHHHHHHHHHHhhhhcCCCCCCCCeeEE
Q 006029 177 NSRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLIPTKLAAGVWNCLMKYKQSIENFPQTETCDLL 256 (664)
Q Consensus 177 ~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~g~~~~~~~~~~~~~~~ia~~la~~l~~~l~~~~~~~~~~~~~~~~~Li 256 (664)
+.......++.+|.+|+++|.++|++|.|||++.....+ ..+|+++|+++++.++.++..-+.+|+.+++.||
T Consensus 156 ~a~~~~~~l~~~a~~I~tvCatL~e~P~vRy~~~~~~~a-------s~l~~~va~~l~~~~~~~~~~~~~~p~~~~seLl 228 (593)
T KOG1300|consen 156 NAAIIDANLEKIADQIATVCATLGEYPNVRYRGDFARNA-------SELAQKVAAKLWDAYKAYKPSIGNGPQKTRSELL 228 (593)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHhCcCcceeeccccccCH-------HHHHHHHHHHHHHHHHhcccccCCCCCcccceEE
Confidence 444556789999999999999999999999999865544 2689999999999999998666677777899999
Q ss_pred EEcCCCCcccchhhhhhhhHHhhhhcccCCCeEEEeecCCCCCCCcceEEecCCCchHHHHhhhccHHHHHHHHHHHHHH
Q 006029 257 ILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPEKKEVLLEEHDPLWLELRHAHIADASERLHEKMTS 336 (664)
Q Consensus 257 IlDR~~D~~TPLlh~~TYqaLi~el~~I~~~~v~~~~~~~~g~~~~~k~~~l~~~D~~~~~~R~~~~~~v~~~l~~~~~~ 336 (664)
|+||++|+++|++|+||||||+||+++|++|.|.++.+...|+ ++|+++|+++|++|-++||+||++|.+.|++.+++
T Consensus 229 IlDRs~D~iaPlLHE~TyqAM~~DLl~iend~Y~ye~~g~~g~--~kk~vllde~D~~WveLRH~HIadvse~l~~~~k~ 306 (593)
T KOG1300|consen 229 ILDRSFDPVAPLLHEFTYQAMAYDLLPIENDVYRYETPGKSGE--KKKEVLLDEDDDLWVELRHKHIADVSERLTKKMKN 306 (593)
T ss_pred EEeccccccchHHHHHHHHHHHHHHHhhcCCEEEEecCCCCCC--ccceeecccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987655543 37899999999999999999999999999999999
Q ss_pred HHHHhHHHHhhhcccCCCCCCHHHHHHHHHhccchHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcCCC-ChH
Q 006029 337 FISKNKAAQIQHSARDGGELSTKDLQKMVQALPQYSDQIDKLSLHVEIAGKINKIIRELRLRELGQLEQDLVFGDA-GLK 415 (664)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~-~~~ 415 (664)
|.++++.... +++..|+.|++.+|++||+|+++..+++.|++||++|++.++. .+.+++.+||++++|.| ..+
T Consensus 307 f~~~nk~~~~-----~~k~~S~kDL~~mv~~lpqy~k~~~Kls~Hl~LA~eC~~~~~~-~L~~l~~iEQDLa~G~Daeg~ 380 (593)
T KOG1300|consen 307 FSSKNKRLQT-----KSKETSTKDLSKMVKKLPQYQKELDKLSLHLELAEECMKKFQE-GLEKLGAIEQDLATGTDAEGE 380 (593)
T ss_pred HHhhhhhhhc-----cccccchHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCcccc
Confidence 9998765432 2346899999999999999999999999999999999999987 99999999999999954 322
Q ss_pred H-------HHHhhhcCCCCChhhHHHHHHHHHHhCCCCCChhHHHHHHHHcCCChhHHHHHHHHHHhcCccccCCCCCCC
Q 006029 416 D-------VVKFFTTNEDVSRENKLRLLMILAAIYPEKFQGEKGQNIMKLARLQSDDITAVNNMRLLGGASDIKKSSTGA 488 (664)
Q Consensus 416 ~-------l~~~i~~~~~~~~~dkLRLl~L~~l~~~~g~~~~~~~~llq~~g~~~~~~~~l~~L~~lg~~~~~~~~~~~~ 488 (664)
. +++.+. ...++..+|+|++++|.+.. +|+...++.+++++.|++.+++.++.|++.+|..... +.
T Consensus 381 kik~~~~~~~p~l~-~~~~~~~dklR~Illy~~~~-~Gi~ee~l~kL~~~~~i~~~~~~ii~~~~~~~~~~~~-----~~ 453 (593)
T KOG1300|consen 381 KIKDSLRDLLPILL-ESNVRLLDKLRLILLYIFER-KGIIEENLAKLLQHAGISVEEMQIIQNLHILGVPVTK-----DS 453 (593)
T ss_pred cHHHHHHhhhhhhc-ccCchHHHHHHHHHHHHHhc-CCccHHHHHHHhcccCCCchHHHHHhhHHHhCCcccc-----Cc
Confidence 2 334444 45789999999999999984 7999999999999999999999999999999887652 22
Q ss_pred CCchhhhhhhhcccccCCCCCccccccccccHHHHHHHHHHhcCCCCCCCCCccCCCCCCccccccccccCCCccccccc
Q 006029 489 FSLKFDINKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMR 568 (664)
Q Consensus 489 ~~~~f~~~k~~~~~~~~~~~~~~~y~~s~y~Pli~~lve~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 568 (664)
|...|. .+.++++. .+..|.+|||+|.+..|+|++++++|+++.|||+++++....+ ....
T Consensus 454 ~~~k~~-----~~~rker~-~e~tyqlSR~~P~Ik~ilE~~i~~~Ld~~~fp~~~~~s~~~~~-------------~~~~ 514 (593)
T KOG1300|consen 454 FLLKFD-----PPERKERV-EEQTYQLSRWVPVIKNILEKLIEDRLDKKHFPYLNDTSETSSG-------------SAAT 514 (593)
T ss_pred ccccCC-----CCcccccc-ccceeeeeeeehHHHHHHHHHHhccCChhhCccccCCcccccc-------------Cccc
Confidence 222221 12245664 7899999999999999999999999999999999876521111 1223
Q ss_pred CCCCCcccCCCCCCCCCCccchhcccccccccCCcEEEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHH
Q 006029 569 SRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITK 648 (664)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~ 648 (664)
+.|++.|...+... .++..++|+||||+|||||+|+|++|+++++++++|+||||+|++|.+|++.
T Consensus 515 Sar~~~~~~~k~~~--------------~~~~~g~ri~VfIiGGvT~SEmRvaYevs~~~~~EViiGS~~iltP~~fL~~ 580 (593)
T KOG1300|consen 515 SARYGHPLSNKTPS--------------AFKKPGQRIIVFIIGGVTFSEMRVAYEVSEKLNREVIIGSDHILTPTKFLDD 580 (593)
T ss_pred cccccCcccccCcc--------------hhhccCceEEEEEeCCccHHHHHHHHHHHHhhCceEEECCcccCCHHHHHHH
Confidence 34444555433211 1235789999999999999999999999999999999999999999999999
Q ss_pred HhccCCC
Q 006029 649 MKMLTVD 655 (664)
Q Consensus 649 l~~l~~~ 655 (664)
|+.+..+
T Consensus 581 lk~~~~k 587 (593)
T KOG1300|consen 581 LKLLKFK 587 (593)
T ss_pred Hhhcccc
Confidence 9944433
No 2
>PF00995 Sec1: Sec1 family; InterPro: IPR001619 Sec1-like molecules have been implicated in a variety of eukaryotic vesicle transport processes including neurotransmitter release by exocytosis []. They regulate vesicle transport by binding to a t-SNARE from the syntaxin family. This process is thought to prevent SNARE complex formation, a protein complex required for membrane fusion. Whereas Sec1 molecules are essential for neurotransmitter release and other secretory events, their interaction with syntaxin molecules seems to represent a negative regulatory step in secretion []. ; GO: 0006904 vesicle docking involved in exocytosis, 0016192 vesicle-mediated transport; PDB: 3C98_A 3PUJ_B 1FVH_A 1FVF_A 1EPU_A 2XHE_A 1MQS_A 2PJX_A 3PUK_A 1Y9J_A.
Probab=100.00 E-value=7.7e-90 Score=785.28 Aligned_cols=540 Identities=32% Similarity=0.580 Sum_probs=409.3
Q ss_pred eEEEEEeccchhHhhhccCchhhhhcCceEEeeccCCCCCCCCCeEEEEecCCHHHHHHHHHHhccCCCCcceEEEEecC
Q 006029 43 WKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSS 122 (664)
Q Consensus 43 ~KvLilD~~~~~ils~~~~~s~L~~~gV~~i~~l~~~R~~~~~~~aIy~i~Pt~~~i~~i~~d~~~~~~~y~~~~i~F~~ 122 (664)
|||||+|+.++++||++|++++|+++||++++.|+..|+|+|+++|||||+|+.+++++|++|++. +.|++|||+|++
T Consensus 1 wKvLi~D~~~~~ils~~~~~~~L~~~gV~~i~~l~~~r~~~~~~~~iy~i~p~~~~i~~i~~~~~~--~~~~~~~i~f~~ 78 (564)
T PF00995_consen 1 WKVLILDKSTLKILSSLCSMSDLLEHGVTLIEKLENKREPMPSMDAIYFIRPTPENIKRIIKDLKN--PPYRSYHIFFTP 78 (564)
T ss_dssp -EEEEE-HHHHHHHHCCS-HHHHHTTTEEEEEETTS--S-BTTSEEEEEE-S-HHHHHHHHHHCHS--TSBSEEEEEESS
T ss_pred CEEEEECcccHHHHHhhcCHHHHHHcCCceEeeccchhhcCCCcceEEEEcCcHHHHHHHHHHHHh--cccccEEEEEeh
Confidence 999999999999999999999999999999999999999999999999999999999999999975 799999999999
Q ss_pred CCCHHHHHHHHhcCCccccccceeEEecceEeccCCceeeCCcchhhhhcC-CCCCccchhHHHHHHHHHHHHHHHHhCC
Q 006029 123 PISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFG-DEENSRRGDACLNVMASRIATVFASLRE 201 (664)
Q Consensus 123 ~~~~~~le~la~~~~~~~~i~~i~e~~~df~pld~~lfsl~~~~~~~~l~~-~~~~~~~~~~~l~~ia~~L~sl~~~lg~ 201 (664)
++++.+++.|++ .++.++|.++.|+++||+|+|+|+|+|++|.+|..+|. +.+ .+.++.+|++|+++|.++|.
T Consensus 79 ~~~~~~~~~l~~-~~~~~~i~~i~e~~~~~~pld~d~fsl~~~~~~~~~~~~~~~-----~~~l~~~a~~L~~l~~~~g~ 152 (564)
T PF00995_consen 79 RVSESLLEILAE-SGVLGRIKSIKEFNLDFIPLDSDLFSLEIPNSFSDLYSSDGD-----ESSLQRIADSLLSLQLTLGE 152 (564)
T ss_dssp ---HHHHHHHHH-SCGGGGEEEEEETT--SEEECTTEEEES-TCHHHHHHSTTGH-----HHHHHHHHHHHHHHHHHTT-
T ss_pred hhhhHHHHhhhh-cCccceecccccceeEEEEccchhhhhcccchHHHHhccccc-----hhHHHHHHHHHHHHHHHhCC
Confidence 999999999986 46899998899999999999999999999999999998 555 67899999999999999999
Q ss_pred ccEEEEccCCCccccccccccchHHHHHHHHHHHHHHHh----hhhcCCCC---CCCCeeEEEEcCCCCcccchhhhhhh
Q 006029 202 FPLVRYRAAKSLDTMTMTTFSDLIPTKLAAGVWNCLMKY----KQSIENFP---QTETCDLLILDRSVDQVAPIIHEWTY 274 (664)
Q Consensus 202 ~P~Ir~~g~~~~~~~~~~~~~~~ia~~la~~l~~~l~~~----~~~~~~~~---~~~~~~LiIlDR~~D~~TPLlh~~TY 274 (664)
+|.|||+|+. .|+++|+.+.+.+.+. ....+.++ ..++++|||+||++|++|||||||||
T Consensus 153 ~p~I~~~g~~-------------~a~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LiIlDR~~D~iTPll~~~TY 219 (564)
T PF00995_consen 153 IPNIRYKGNS-------------NAKRVAELLQKKLQENEDNFSSSNPDFPPGSSFERPLLIILDRSVDLITPLLHQWTY 219 (564)
T ss_dssp --EEEE-TTC-------------HHHHHHHHHHHHHHHHHTTHCHCSTTTT-SCSCCSEEEEEEEGGG-SSTTTS---BH
T ss_pred CCeEEEeCch-------------hHHHHHHHHHHHhhhccccccccccccCCccccCCceEEEecccccccchhhcCcee
Confidence 9999999982 2556666666555542 22223332 12358999999999999999999999
Q ss_pred hHHhhhhcccCCCeEEEeecCCCCCCCcceEEecCCCchHHHHhhhccHHHHHHHHHHHHHHHHHHhHHHHhhhcccCCC
Q 006029 275 DAICRDLLNMEGNKYVHEVPSKTGGPPEKKEVLLEEHDPLWLELRHAHIADASERLHEKMTSFISKNKAAQIQHSARDGG 354 (664)
Q Consensus 275 qaLi~el~~I~~~~v~~~~~~~~g~~~~~k~~~l~~~D~~~~~~R~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 354 (664)
||||||+|||++|.|+++.+...+ ..++++.|+++|++|+++||+||++|++.|+++++++++++ .. ..++
T Consensus 220 e~li~d~~~i~~~~v~~~~~~~~~--~~~~~~~L~~~D~~~~~~r~~~~~~v~~~l~~~~~~~~~~~-~~------~~~~ 290 (564)
T PF00995_consen 220 EGLIDDLFGINNNKVEIPDEINSG--ENKKKVVLNSNDPFFNEIRHLHFSEVGEKLNKKAKELKEEY-EK------SRSK 290 (564)
T ss_dssp HHHHHHHSTEBTTEEEEEECSSSS--ECEEEEE-STTCTCHHHHTTSBCHHHHHHHHHHHHHHHHHC-H----------S
T ss_pred eeEHHhhhhhcCCEeccccCCCcc--ccceeEecCCCCHHHHHHHhhCHHHHHHHHHHHHHHHHHhh-cc------ccch
Confidence 999999999999999998753332 22478999999999999999999999999999999998654 10 1346
Q ss_pred CCCHHHHHHHHHhccchHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcCCCCh----HHHHHhhhcCCCCChh
Q 006029 355 ELSTKDLQKMVQALPQYSDQIDKLSLHVEIAGKINKIIRELRLRELGQLEQDLVFGDAGL----KDVVKFFTTNEDVSRE 430 (664)
Q Consensus 355 ~~s~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~~----~~l~~~i~~~~~~~~~ 430 (664)
..++++|++||++||+++++++.+++|++|+++|++.+++++|.+++++||+|++|.+.. +.+.++|. +...+.+
T Consensus 291 ~~~~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~~Eq~i~~~~~~~~~~~~~i~~~i~-~~~~~~~ 369 (564)
T PF00995_consen 291 SKSIQEMKEFVKKLPELQEQQKSLSLHTNIAEEILKIIKKRNLDELIELEQDIASGEDSDGELLQYIEELIN-SRKISIE 369 (564)
T ss_dssp TTTHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHSCHTTSHB-SCHHHHHH-STTSTHH
T ss_pred hhHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhCCccchhhHHHHHHHhh-ccCCCHH
Confidence 789999999999999999999999999999999999999999999999999999987543 24788885 3578999
Q ss_pred hHHHHHHHHHHhCCCCCChh---HHHHHHHHcCCChhHHHHHHHHHHhcCccccCCCCCCCCCchhhhhhhhccc---c-
Q 006029 431 NKLRLLMILAAIYPEKFQGE---KGQNIMKLARLQSDDITAVNNMRLLGGASDIKKSSTGAFSLKFDINKKKRAV---R- 503 (664)
Q Consensus 431 dkLRLl~L~~l~~~~g~~~~---~~~~llq~~g~~~~~~~~l~~L~~lg~~~~~~~~~~~~~~~~f~~~k~~~~~---~- 503 (664)
++|||+|||+++. |+++. .+++.+.+.|++.+++.++.+|+++|+...+.+ + ..|.. .++.++++ .
T Consensus 370 d~LRLl~L~sl~~--g~~~~~~~~l~~~l~~~~~g~~~l~~l~~L~~~g~~~~~~~-~-~~~~~---~~~~~~l~~~~~~ 442 (564)
T PF00995_consen 370 DKLRLLCLYSLTN--GIKGKDYDQLKKLLLQAGYGIEALQLLNNLEKLGLLKSKDN-S-SNFQS---IRKKLNLISKFND 442 (564)
T ss_dssp HHHHHHHHHHHHH---HTCBHHHHHHHHHHHTT--HCHHHHHHHGGGGTHHCBSHT-T-S--CT---TC-TT---HHTTC
T ss_pred HHHHHHHHHHHHh--cCCcchHHHHHHHhhhcCCChHHHHHHHHHHHhcchhhccC-c-cchhh---hcccccccccccc
Confidence 9999999999994 45443 345656555555599999999999999876420 0 01211 12223322 1
Q ss_pred --cCCCCCccccccccccHHHHHHHHHHhcCCCC-CCCCCccCCCCCCccccccccccCCCcccccccCCCCCcccCCCC
Q 006029 504 --KDRTGEEQTWQLSRFYPMIEELIEKLGKRELP-KDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRN 580 (664)
Q Consensus 504 --~~~~~~~~~y~~s~y~Pli~~lve~~~~~~l~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 580 (664)
....+.+..|+|+||+|+++|+|+.+.+++|+ ++.||++........+. ..+....+. .|....
T Consensus 443 ~~~~~~~~~~~~~~~~y~Pli~rlve~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~- 509 (564)
T PF00995_consen 443 KNDKNNPKDISYVYSGYAPLIVRLVEDLIKGKLDKEEEFPYLDPKPKNLNGS-----------SFSLRSSKP-SRSKTQ- 509 (564)
T ss_dssp CCSSSSCSCCCSTTCT---HHHHHHHHHHTTHSHHTTTSEBSSTCC-----S-----------SSSSS------------
T ss_pred cccccccccccchhcccccHHHHHHHHHhhccCCcccccccccccccccCCC-----------Ccccccccc-cccccc-
Confidence 11246789999999999999999999999997 88999987543111111 011111110 111000
Q ss_pred CCCCCCccchhcccccccccCCcEEEEEEEcCcCHHHHHHHHHHHhhCC--CeEEEccCcccChhHHHHHH
Q 006029 581 SDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLN--REIILGSTSLDDPPQFITKM 649 (664)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~viVf~iGGvTysEi~al~~L~~~~~--~~iiigsT~Ii~~~~fl~~l 649 (664)
....++++|||||||||||+|+|++|+++++.+ ++|+||||+|+||++||++|
T Consensus 510 ----------------~~~~~~~~viVf~vGGvTy~Ei~~l~~l~~~~~~~~~iiigsT~il~~~~fl~~L 564 (564)
T PF00995_consen 510 ----------------PSNKPRKRVIVFFVGGVTYSEIRALRELSKKLGPGKEIIIGSTSILNPNDFLESL 564 (564)
T ss_dssp -------------------S-SSEEEEEEETEBEHHHHHHHHHHHTTSSSSSEEEEEESSBE-HHHHHHHH
T ss_pred ----------------cccCCCCEEEEEEEcCCcHHHHHHHHHHHHhhCCCcEEEEEeCCccCHHHHHHhC
Confidence 011357889999999999999999999999988 99999999999999999986
No 3
>KOG1302 consensus Vacuolar sorting protein VPS33/slp1 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.1e-84 Score=689.06 Aligned_cols=561 Identities=19% Similarity=0.318 Sum_probs=451.2
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhccCCCCCCCeEEEEEeccchhHhhhccCchhhhhcCceEEeeccCCCCC-CCCCeEE
Q 006029 11 YGGDYKNFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQP-LPSMEAI 89 (664)
Q Consensus 11 ~~~~~~~l~~~~~~~l~~~~l~~v~~~~~~~~~KvLilD~~~~~ils~~~~~s~L~~~gV~~i~~l~~~R~~-~~~~~aI 89 (664)
...++..+++.+++.|+ ++|++++| .|.||||+.++++|+++.++|.|++|||.....++..+-| ......|
T Consensus 10 ~~~~l~~lq~~a~~eL~-~lLds~pG------~K~lvlD~dL~~pL~~ia~~s~Lk~hgV~~~~~l~~~~~~~~~~~~~v 82 (600)
T KOG1302|consen 10 ADLNLQGLQEVARRELI-SLLDSLPG------KKELVLDPDLMGPLGLIATASLLKEHGVRRLLHLDAEKSPNSEVKQVV 82 (600)
T ss_pred ccchHHHHHHHHHHHHH-HHHhcCCC------ceeEEecccccchhhccccHHHHHHhCcHHhhccCcccCcccccCeEE
Confidence 45789999999999999 79999984 9999999999999999999999999999988888876533 3346699
Q ss_pred EEecCCHHHHHHHHHHhcc--CCCCcceEEEEecCCCCH--HHHHHHHhcCCccccccceeEEecceEeccCCceeeCCc
Q 006029 90 YFIQPTKENVIMFLSDMSG--RSPLYKKAFVFFSSPISR--ELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDE 165 (664)
Q Consensus 90 y~i~Pt~~~i~~i~~d~~~--~~~~y~~~~i~F~~~~~~--~~le~la~~~~~~~~i~~i~e~~~df~pld~~lfsl~~~ 165 (664)
||++|+.++++.|++++++ +...-+.||++| +|+ .+++.+.++.++++.+ .+.|++++++|+|.|++||+.|
T Consensus 83 y~~Rp~~~~~~~ia~~v~~~~~d~~~r~~~vi~---~P~~~~~c~~~Lee~gv~~~v-~~~e~~~~~lpld~DllSlEl~ 158 (600)
T KOG1302|consen 83 YFVRPRLENMQLIAEHVENVQRDGFTRDYHVIF---VPRRSSLCETLLEEEGVYGLV-LVEEQILDLLPLDGDLLSLELP 158 (600)
T ss_pred EEEcCchHHHHHHHHHHhhhhhchhcceeEEEE---eccHHHHHHHHHHhccccccc-ccchhhhhhccccccchhccch
Confidence 9999999999999999973 234568899999 554 2578888888999776 5999999999999999999999
Q ss_pred chhhhhcCCCCCccchhHHHHHHHHHHHHHHHHhCCccEEEEccCCCccccccccccchHHHHHHHHHHHHHHHhhhhcC
Q 006029 166 RALEELFGDEENSRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLIPTKLAAGVWNCLMKYKQSIE 245 (664)
Q Consensus 166 ~~~~~l~~~~~~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~g~~~~~~~~~~~~~~~ia~~la~~l~~~l~~~~~~~~ 245 (664)
+.|.++|.++| .+.+..+|++|.+++..+|.+|.|+..|+ .|+++++++++..++..
T Consensus 159 ~~~~d~~~~gd-----~s~l~~va~~l~~LQ~~~G~ip~v~g~G~------------------~ak~~~~l~~~l~~e~~ 215 (600)
T KOG1302|consen 159 NSFLDLYLDGD-----QSSLYHVADALVSLQRLYGIIPKVYGKGE------------------CAKRVWELLKKLEREEA 215 (600)
T ss_pred HHHHHHhhccc-----cchhHHHHHHHHHHHHhhCCCcceeeccH------------------HHHHHHHHHHHHhhccc
Confidence 99999999888 67899999999999999999999999998 45566666665544321
Q ss_pred --CCCC-CCCeeEEEEcCCCCcccchhhhhhhhHHhhhhcccCCCeEEEeecCCC----C----CCCcceEEecCCCchH
Q 006029 246 --NFPQ-TETCDLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKT----G----GPPEKKEVLLEEHDPL 314 (664)
Q Consensus 246 --~~~~-~~~~~LiIlDR~~D~~TPLlh~~TYqaLi~el~~I~~~~v~~~~~~~~----g----~~~~~k~~~l~~~D~~ 314 (664)
..+. +++++||++||++|++||||||+||+|||||+|||++|.|+++....+ | +..+++.+.++..|++
T Consensus 216 t~n~~~~~~~~~liLlDR~~D~vtpLlTQltYeGLLDEiy~I~~g~vk~p~~~~~~~q~g~~~~~~~~~~~~l~~~~deI 295 (600)
T KOG1302|consen 216 TENNGDRPEIDHLILLDRDVDPVTPLLTQLTYEGLLDEIYGISSGNVKLPSENFKRNQAGDLGKGKTEKKIVLLYSSDEI 295 (600)
T ss_pred cccCCCccccceEEEEeccCcccchhhhHHHHHHHHHHHhhccCCeEecChHHccchhcCCCccCccccceeccCcHHHH
Confidence 1222 457899999999999999999999999999999999999988764211 1 2345677888899999
Q ss_pred HHHhhhccHHHHHHHHHHHHHHHHHHhHHHHhhhcccCCCCCCHHHHHHHHHhccchHHHHhhHHHHHHHHHHHHHHHHH
Q 006029 315 WLELRHAHIADASERLHEKMTSFISKNKAAQIQHSARDGGELSTKDLQKMVQALPQYSDQIDKLSLHVEIAGKINKIIRE 394 (664)
Q Consensus 315 ~~~~R~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~ 394 (664)
|+++|++||+.|++.+++++++++..++. +.+.++++||++||++||.++++++.++.|+++|+.++++++.
T Consensus 296 y~eiR~k~f~~v~~~lsk~ak~l~~~~~~--------r~~~~sV~Eik~FV~~Lp~L~~~~~~l~~H~~lae~i~~~v~~ 367 (600)
T KOG1302|consen 296 YAEIRNKHFNAVGPLLSKKAKELQAQYET--------RRQAMSVAEIKDFVSKLPKLQQRKKSLERHTNLAEMIMQHVKN 367 (600)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999987652 3568899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhcCCCChHHHHHhhhc--CCCCChhhHHHHHHHHHHhCCCCCChhHH----HHHHHHcCCChhHHHH
Q 006029 395 LRLRELGQLEQDLVFGDAGLKDVVKFFTT--NEDVSRENKLRLLMILAAIYPEKFQGEKG----QNIMKLARLQSDDITA 468 (664)
Q Consensus 395 ~~l~~~~~lEq~i~~g~~~~~~l~~~i~~--~~~~~~~dkLRLl~L~~l~~~~g~~~~~~----~~llq~~g~~~~~~~~ 468 (664)
..|.+++++||+++.|.+..++ .++|++ ..+.+...+|||+||.|++. +|++++++ +.++|.||+ +++.+
T Consensus 368 ~~f~~~l~lE~ell~~~d~~k~-~~~IeElI~~~~~~~~vLRLicL~Slt~-~Gl~~k~l~~~rr~~lqsYG~--ehl~t 443 (600)
T KOG1302|consen 368 EDFRKLLKLEHELLEGNDSDKD-FDYIEELIYQEVPLNNVLRLICLLSLTC-NGLKPKDLDHYRREYLQSYGY--EHLLT 443 (600)
T ss_pred HHHHHHHHHHHHHHhccCcccc-hHHHHHHHhhcccHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHhhhH--HHHHH
Confidence 9999999999999999876544 444443 34789999999999999998 59998764 568999999 99999
Q ss_pred HHHHHHhcCccccCCCCCC--CCC-chhhh-hhhhcccccC---CCCCccccccccccHHHHHHHHHHhcCCCCCCCCCc
Q 006029 469 VNNMRLLGGASDIKKSSTG--AFS-LKFDI-NKKKRAVRKD---RTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPC 541 (664)
Q Consensus 469 l~~L~~lg~~~~~~~~~~~--~~~-~~f~~-~k~~~~~~~~---~~~~~~~y~~s~y~Pli~~lve~~~~~~l~~~~~p~ 541 (664)
|.||+++|++..+...+.. ..+ ..|+. .+.++++..+ .+|+|++|+||||+|+++||+|++++..+-...|-.
T Consensus 444 l~nL~kaGLl~~q~~~~~~~~~~~~~~~st~~ntl~l~~~~~d~~~p~DiaYvySgy~PLs~rlve~~l~~~~w~~~~~~ 523 (600)
T KOG1302|consen 444 LQNLEKAGLLREQTGGRKLHTKSSKRNYSTWANTLPLVDEENDESNPSDIAYVYSGYAPLSCRLVEDLLKRRGWQELYSK 523 (600)
T ss_pred HHHHHHcCCcccccCCCcchhhHHHHHHHHHHhcCCCcCCcccccCcccchhhhcccccHHHHHHHHHhcccchhhhHHH
Confidence 9999999999874322100 000 12332 3445555433 369999999999999999999999988533333322
Q ss_pred cCCCCCCccccccccccCCCcccccccCCCCCcccCCCCCCCCCCccchhcccccccccCCcEEEEEEEcCcCHHHHHHH
Q 006029 542 MNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVC 621 (664)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVf~iGGvTysEi~al 621 (664)
+...+ |..... .+|..... ..++.. +...+.++|||+||+||+||+|+
T Consensus 524 i~~l~----g~~~e~----------------~~~~~~~~---------~~~~~~---~g~~R~~lVff~GG~T~~EIAal 571 (600)
T KOG1302|consen 524 IRNLP----GPHFEE----------------VTWTPSDI---------ASKNNS---PGALRVTLVFFLGGCTYAEIAAL 571 (600)
T ss_pred HccCC----CCchhh----------------cccChhhh---------cccccC---CCCcceEEEEEECCccHHHHHHH
Confidence 32211 110000 01111000 000000 11367889999999999999999
Q ss_pred HHHHhhCCCeEEEccCcccChhHHHHHH
Q 006029 622 HKLTRKLNREIILGSTSLDDPPQFITKM 649 (664)
Q Consensus 622 ~~L~~~~~~~iiigsT~Ii~~~~fl~~l 649 (664)
|+|++..|++|+|+||+++||.++|+.+
T Consensus 572 r~l~~~~~~~f~i~Tt~ling~~ll~~~ 599 (600)
T KOG1302|consen 572 RFLAKLEGYRFLIATTGLINGSSLLEAI 599 (600)
T ss_pred HHHHhhcCceEEEEeccccchHHHHHhh
Confidence 9999999999999999999999999986
No 4
>KOG1299 consensus Vacuolar sorting protein VPS45/Stt10 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-83 Score=657.61 Aligned_cols=531 Identities=25% Similarity=0.426 Sum_probs=436.6
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEEEeccchhHhhhccCchhhhhcCceEEeeccC-CCCCCCCCeEEEEecCCHHH
Q 006029 20 QISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHR-RRQPLPSMEAIYFIQPTKEN 98 (664)
Q Consensus 20 ~~~~~~l~~~~l~~v~~~~~~~~~KvLilD~~~~~ils~~~~~s~L~~~gV~~i~~l~~-~R~~~~~~~aIy~i~Pt~~~ 98 (664)
...|..+ +.|+.... ++.|||++|+.|.+++|.|+++|+|+++.|.+++.|++ .|+.+.+.+||+|||||+++
T Consensus 5 ~~~k~yi-~~m~~~~g-----~~mKvLLlD~eTt~ivS~~~tQSelLq~evyLferI~n~~rE~~khLkcvvfiRPT~en 78 (549)
T KOG1299|consen 5 SSSKKYI-EKMIQESG-----PGMKVLLLDKETTPIVSMCITQSELLQKEVYLFERIDNKSRERIKHLKCVVFIRPTPEN 78 (549)
T ss_pred HHHHHHH-HHHHHhcC-----CCceEEEEcCCCceehhhhcchHHHhhhheehhhhhcchhhHHhhCceEEEEeccChHH
Confidence 3455555 47877653 36999999999999999999999999999999999987 78999999999999999999
Q ss_pred HHHHHHHhccCCCCcceEEEEecCCCCHHHHHHHHhcCCccccccceeEEecceEeccCCceeeCCcchhhhhcCCCCCc
Q 006029 99 VIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEENS 178 (664)
Q Consensus 99 i~~i~~d~~~~~~~y~~~~i~F~~~~~~~~le~la~~~~~~~~i~~i~e~~~df~pld~~lfsl~~~~~~~~l~~~~~~~ 178 (664)
|++++++++ +|+|..|||||++.+|+..++.||++ +....|..+.|+++||+++++++|||++|++|.....
T Consensus 79 iq~L~~ELr--nPry~~Y~lyFsN~i~ks~le~LAes-D~~E~V~eVqE~y~Df~~~n~~Lfsln~p~~~~~~~~----- 150 (549)
T KOG1299|consen 79 IQLLIEELR--NPRYGEYHLYFSNIISKSDLERLAES-DEQEVVREVQEIYLDFFKVNPDLFSLNIPHIFESSLN----- 150 (549)
T ss_pred HHHHHHHhc--CCcceeEEEEEeccCCHHHHHHHHhc-chHHHHHHHHHHHHhhhccCCceeecCCchhhccccc-----
Confidence 999999996 59999999999999999999999974 5678888999999999999999999999998876422
Q ss_pred cchhHHHHHHHHHHHHHHHHhCCccEEEEccCCCccccccccccchHHHHHHHHHHHHHHHhhhhcCCCCCCC-CeeEEE
Q 006029 179 RRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLIPTKLAAGVWNCLMKYKQSIENFPQTE-TCDLLI 257 (664)
Q Consensus 179 ~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~g~~~~~~~~~~~~~~~ia~~la~~l~~~l~~~~~~~~~~~~~~-~~~LiI 257 (664)
|....+.++.+||++++.+++..|.|||++++ ..|+++|+.+...+.+ .++..+|+.++ .|+|||
T Consensus 151 -w~~~~l~R~~~GI~AllLsLK~~P~IRYq~~S------------~~~~~lAe~vs~~i~~-E~~lFdfr~~~~~p~LLi 216 (549)
T KOG1299|consen 151 -WDPGALTRSTQGIIALLLSLKKKPVIRYQTSS------------RACKRLAEEVSYRITK-ESTLFDFRRTDSPPLLLI 216 (549)
T ss_pred -cChhhhhHhHhhHHHHHHhccCCCeeEeecCC------------HHHHHHHHHHHHHHhh-hhhhcccccCCCCCeEEE
Confidence 12567899999999999999999999999885 4688899988887766 44566777654 689999
Q ss_pred EcCCCCcccchhhhhhhhHHhhhhcccCCCeEEEeecCCCCCCCcceEEecC-CCchHHHHhhhccHHHHHHHHHHHHHH
Q 006029 258 LDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPEKKEVLLE-EHDPLWLELRHAHIADASERLHEKMTS 336 (664)
Q Consensus 258 lDR~~D~~TPLlh~~TYqaLi~el~~I~~~~v~~~~~~~~g~~~~~k~~~l~-~~D~~~~~~R~~~~~~v~~~l~~~~~~ 336 (664)
+||+.||+||||+|||||||+||++||++|+|.+.. .++.+.+.++++|+ .+|+||+..++.||+|++..|+..+.+
T Consensus 217 LDR~~DpvTPLL~qWTYQaMvHEl~gi~nnrvdls~--~~~~~kd~~evvLS~~~D~Ff~~nmy~NfgEiG~~IK~lv~~ 294 (549)
T KOG1299|consen 217 LDRRDDPVTPLLNQWTYQAMVHELLGIKNNRVDLSK--VPSIPKDLEEVVLSSEQDPFFKNNMYANFGEIGSNIKQLVSE 294 (549)
T ss_pred EecCCCCCchhhhHHHHHHHHHHHhccccCEEeecc--CCCCccccceeeeccccchHHHhhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999875 23334445677776 799999999999999999999999999
Q ss_pred HHHHhHHHHhhhcccCCCCCCHHHHHHHHHhccchHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcCCCCh--
Q 006029 337 FISKNKAAQIQHSARDGGELSTKDLQKMVQALPQYSDQIDKLSLHVEIAGKINKIIRELRLRELGQLEQDLVFGDAGL-- 414 (664)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~~-- 414 (664)
|+.+.+ ...+..+++||+.|+..+|++++....++.|+.+..++++.++.++|.+++|+||++++..+..
T Consensus 295 fq~k~~--------~~~~iesi~Dmk~Fve~YPefkkmSG~VsKHv~lvgEls~lv~~~nL~evSEvEQ~l~c~~~~~~~ 366 (549)
T KOG1299|consen 295 FQFKTK--------TNSNIESIADMKNFVEDYPEFKKMSGNVSKHVALVGELSKLVQRRNLLEVSEVEQNLACNGDHGAD 366 (549)
T ss_pred HHHhhh--------hchhhhhHHHHHHHHHhcHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcCcchhh
Confidence 986422 1235679999999999999999999999999999999999999999999999999999866543
Q ss_pred -HHHHHhhhcCCCCChhhHHHHHHHHHHhCCCCCChhHHHHHHH---HcCCChhHHHHHHHHHHhcCccccCCCCCCCCC
Q 006029 415 -KDVVKFFTTNEDVSRENKLRLLMILAAIYPEKFQGEKGQNIMK---LARLQSDDITAVNNMRLLGGASDIKKSSTGAFS 490 (664)
Q Consensus 415 -~~l~~~i~~~~~~~~~dkLRLl~L~~l~~~~g~~~~~~~~llq---~~g~~~~~~~~l~~L~~lg~~~~~~~~~~~~~~ 490 (664)
.++..+|. +..++..|++||+|||+|.+. ..++.+.+++++ .-|. ..-.++..|.+++....+.. .-|+
T Consensus 367 ~~~i~~LL~-n~~vs~~d~lrLv~lYaLr~e-~~~~~~~~~L~~~l~~~~~--~~~~~v~~ll~~~G~~~R~~---dlf~ 439 (549)
T KOG1299|consen 367 FNDIKKLLQ-NEKVSEIDRLRLVALYALRYE-RHPPNELRQLPQILREQGP--KKPELVPFLLKYAGLHVRQG---DLFG 439 (549)
T ss_pred HHHHHHHHc-CCcccHHHHHHHHHHHHHHhc-cCChHHHHHHHHHHHhcCC--CcchhHHHHHHhcCcccccc---cccC
Confidence 45667777 467999999999999999995 566666666544 3343 23344555555555544221 2233
Q ss_pred ch--hhhhhhhcccccCCCCCccccccccccHHHHHHHHHHhcCCCCCCCCCccCCCCCCccccccccccCCCccccccc
Q 006029 491 LK--FDINKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMR 568 (664)
Q Consensus 491 ~~--f~~~k~~~~~~~~~~~~~~~y~~s~y~Pli~~lve~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 568 (664)
.. +...+. . -+..++.++.| .+|.|+++++++.+.+|++.+-.||+++...
T Consensus 440 ~~~~v~i~R~--~-~kglkgvENVy--tQH~P~lk~~l~~~~rgRl~~~~~p~l~~~~---------------------- 492 (549)
T KOG1299|consen 440 PNDLVPIARR--F-IKGLKGVENVY--TQHQPLLKSTLEDLFRGRLKEIDYPFLGSQT---------------------- 492 (549)
T ss_pred cchhHHHHHH--H-hhccCcchhhh--hccCHHHHHHHHHHHhcccccCCCccccccc----------------------
Confidence 22 111111 1 12223455555 6999999999999999999988899875211
Q ss_pred CCCCCcccCCCCCCCCCCccchhcccccccccCCcEEEEEEEcCcCHHHHHHHHHHHhh-CCCeEEEccCcccChhHHHH
Q 006029 569 SRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRK-LNREIILGSTSLDDPPQFIT 647 (664)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVf~iGGvTysEi~al~~L~~~-~~~~iiigsT~Ii~~~~fl~ 647 (664)
...+++.|||||+||+||+|.|.++++..+ .|.+++.|+|+|+|.+.|++
T Consensus 493 -----------------------------s~~~pq~IIVfivGGaTYEEa~~V~~~N~tn~g~rvvLgGttvlntk~f~~ 543 (549)
T KOG1299|consen 493 -----------------------------SRDRPQDIIVFIVGGATYEEARVVHELNATNPGVRVVLGGTTVLNTKSFID 543 (549)
T ss_pred -----------------------------ccCCCceEEEEEECCccHHHHHHHHHHhcCCCceEEEEcceEEechHHHHH
Confidence 012578999999999999999999999865 48999999999999999999
Q ss_pred HHhc
Q 006029 648 KMKM 651 (664)
Q Consensus 648 ~l~~ 651 (664)
++..
T Consensus 544 di~~ 547 (549)
T KOG1299|consen 544 EIMA 547 (549)
T ss_pred HHhc
Confidence 9865
No 5
>COG5158 SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion]
Probab=100.00 E-value=1.1e-82 Score=690.62 Aligned_cols=565 Identities=25% Similarity=0.416 Sum_probs=444.6
Q ss_pred hHHHHHHHHHHHHHHHhccCCCCCCCeEEEEEeccchhHhhhccCchhhhhcCceEEeeccCCCCCCCCCeEEEEecCCH
Q 006029 17 NFKQISRERLLYEMLRSAKTGTSKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEAIYFIQPTK 96 (664)
Q Consensus 17 ~l~~~~~~~l~~~~l~~v~~~~~~~~~KvLilD~~~~~ils~~~~~s~L~~~gV~~i~~l~~~R~~~~~~~aIy~i~Pt~ 96 (664)
++++.++++|+ +++..|.++ ..|||||+|+.+..|||+|+++++|++|||++++.|+++|+|.++.+|||||+||.
T Consensus 3 dl~e~q~~~i~-~~i~~v~~~---n~~KvLllD~~t~~ils~~~~~s~lle~~I~~~~~i~~~R~~~~~~~aiy~v~pt~ 78 (582)
T COG5158 3 DLLELQKNKIL-DEIFLVQPA---NIWKVLLLDKDTTSILSSLITTSELLEHGITLVDLIENKREPISDLPAIYFVRPTK 78 (582)
T ss_pred cHHHHHHHHHH-HHHHhcCCC---cceEEEEEecchHHHHHhhcchHHHHhcCceEEEeecCCCCCCCCCCEEEEEcCch
Confidence 58899999999 578787642 26999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCcceEEEEecCCCCHHHHHHHHhcCCccccccceeEEecceEeccCCceeeCCcchhhhhcCCCC
Q 006029 97 ENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKKDSTVLPRIGALREMNLEYFAIDSQGFVTDDERALEELFGDEE 176 (664)
Q Consensus 97 ~~i~~i~~d~~~~~~~y~~~~i~F~~~~~~~~le~la~~~~~~~~i~~i~e~~~df~pld~~lfsl~~~~~~~~l~~~~~ 176 (664)
+++++|++|+.+..|.|..||+.|++.++..+++.+++ .++...|.+|.++++||+++|+++|++++|..|...+.+..
T Consensus 79 e~i~~i~~D~~~~~~~Y~~~~~~f~~~~~~~l~e~l~e-s~~~~~i~~V~e~~ldf~~le~dlfsl~~p~~~~~~~~~~~ 157 (582)
T COG5158 79 ENIDLILEDLEQWDPFYLNYHISFLNTVTESLLELLAE-SGVFEKILSVYEIYLDFFVLESDLFSLNLPESFLESSLPST 157 (582)
T ss_pred HHHHHHHHHHhccCccccceeEEecccchHHHHHHHhh-cCchhheeeeeeeecceEEechHhHhhcCchhhhhhcCCCc
Confidence 99999999998656899999999999999988888875 67788899999999999999999999999999988877643
Q ss_pred CccchhHHHHHHHHHHHHHHHHhCCccEEEEccCCCccccccccccchHHHHHHHHHHHHHHHhhhhcCCCC---CCCCe
Q 006029 177 NSRRGDACLNVMASRIATVFASLREFPLVRYRAAKSLDTMTMTTFSDLIPTKLAAGVWNCLMKYKQSIENFP---QTETC 253 (664)
Q Consensus 177 ~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~~g~~~~~~~~~~~~~~~ia~~la~~l~~~l~~~~~~~~~~~---~~~~~ 253 (664)
...+-.|+++|+++|.++|.+|.|||.++. .|.++|+++-..+........++. .+.++
T Consensus 158 -----~~~~~~~v~gl~S~~~slg~~P~Ir~~~~~-------------~a~~~ak~l~~~~~~~~~~~~~~~~~~~~~~~ 219 (582)
T COG5158 158 -----TEALIKIVNGLFSLCVSLGRIPIIRYSGGK-------------NAEHMAKKLSDEIRNELSINFDGVVSKNPLRP 219 (582)
T ss_pred -----hHHHHHHHhhHHHHHhhcCCcceEEecCCc-------------hHHHHHHHHHHHHHHHHHhhcccccccCCCCc
Confidence 234558999999999999999999998763 244555554444432222121221 12479
Q ss_pred eEEEEcCCCCcccchhhhhhhhHHhhhhcccCCCeEEEeecCCCCCCCcceEEecCCCchHHHHhhhccHHHHHHHHHHH
Q 006029 254 DLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPEKKEVLLEEHDPLWLELRHAHIADASERLHEK 333 (664)
Q Consensus 254 ~LiIlDR~~D~~TPLlh~~TYqaLi~el~~I~~~~v~~~~~~~~g~~~~~k~~~l~~~D~~~~~~R~~~~~~v~~~l~~~ 333 (664)
+|||+||+.|++|||+|+||||||+||+++|++|.|+++.....| ++++...++.+|+||.++||+||++|++.|.+.
T Consensus 220 ~LIIlDRs~D~iTPlLh~wTYqaml~Dl~~~~~~~v~~~~~~~~g--~~kk~~~~~~~D~~w~~~k~~~f~~v~e~l~~~ 297 (582)
T COG5158 220 ILIILDRSLDPITPLLHQWTYQAMLHDLLGINNNIVTIPSSSVNG--PEKKFSLSDKDDPFWNDNKFLNFGEVGEKLKKL 297 (582)
T ss_pred eEEEEecCCCcccchHHHHHHHHHHHHHHHhhcCeEEeccccccc--ccceeccCCcccHhHHHhccCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999997654444 566777778999999999999999999999999
Q ss_pred HHHHHHHhHHHHhhhcccCCCCCCHHHHHHHHHhccchHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcCCCC
Q 006029 334 MTSFISKNKAAQIQHSARDGGELSTKDLQKMVQALPQYSDQIDKLSLHVEIAGKINKIIRELRLRELGQLEQDLVFGDAG 413 (664)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~~~~~l~~~~~lEq~i~~g~~~ 413 (664)
+++|+.+++. .. .....++.+|++||.+||+++++++.+.+|++|+++|+++++.++|+++.++||++.++.+.
T Consensus 298 ~~~l~~~~~~--~~----~~~~~s~~dik~~v~~lpel~~~~~~l~~H~~l~~e~l~~~~~~~l~~f~eIEq~l~~~~~~ 371 (582)
T COG5158 298 AKELKTKAQL--RH----KENAKSVNDIKEFVDKLPELQKRSRSLNKHLTLASELLKVVEERYLDDFSEIEQNLSTGNDV 371 (582)
T ss_pred HHHHHHHHhh--hh----hhhcccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 9999987642 21 12357999999999999999999999999999999999999999999999999999988754
Q ss_pred hHHHHHhhhcC-CCCChhhHHHHHHHHHHhCCCCC-ChhHHHHHHHHcCCChhHHHHHHHHHHhcCccccCCCC----CC
Q 006029 414 LKDVVKFFTTN-EDVSRENKLRLLMILAAIYPEKF-QGEKGQNIMKLARLQSDDITAVNNMRLLGGASDIKKSS----TG 487 (664)
Q Consensus 414 ~~~l~~~i~~~-~~~~~~dkLRLl~L~~l~~~~g~-~~~~~~~llq~~g~~~~~~~~l~~L~~lg~~~~~~~~~----~~ 487 (664)
...+.++|... ......+||||+|||+++. +|+ ...+..+++..-|++.+++..+.+|..+|.+..+.... .+
T Consensus 372 ~~~i~Dli~~l~~~~~E~~klRllilysL~~-~~~~~~~~~~~~l~~~~~~~e~~~~~~~l~~~~~~~~~~~~~~s~~~g 450 (582)
T COG5158 372 KSDISDLIELLESGVEEDDKLRLLILYSLTK-DGLIKDIDELRLLRIQGYGIEALNFFQRLKELGFLTLKDSKTISLKRG 450 (582)
T ss_pred hhhHHHHHHHHhcCchHHHHHHHHHHHHHhc-CcchhHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhhhhcccccccccC
Confidence 33444444321 1223336999999999998 463 33344456666677779999999999999875432110 01
Q ss_pred C---CCchhhhhhhhcccccCCCCCccccccccccHHHHHHHHHHhcCCCCCCCCCccCCCCCCccccccccccCCCccc
Q 006029 488 A---FSLKFDINKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKRELPKDDYPCMNEPSPTVHAKNQSAAISQPPVA 564 (664)
Q Consensus 488 ~---~~~~f~~~k~~~~~~~~~~~~~~~y~~s~y~Pli~~lve~~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 564 (664)
. ...+++ .+..-+..+...+..++|++|.|..+++...++.+.+.+..+..+..
T Consensus 451 ~~d~l~~~~n---~y~~s~~~~~~~~~~~v~~~~iP~~k~~~~~~~~~~~~~~~~s~~~~-------------------- 507 (582)
T COG5158 451 DKDSLFQWFN---TYSLSREHQGVPDLENVYSGLIPLKKDIPIDLLVRRLFEPLKSSQQQ-------------------- 507 (582)
T ss_pred CcccccCccc---ccccccccCCCchHHHHHHhhcchhcccchhhhhhhhcccccchhcc--------------------
Confidence 1 111111 11111111335678889999999999999999988764433322210
Q ss_pred ccccCCCCCcccCCCCCCCCCCccchhcccccccccCCcEEEEEEEcCcCHHHHHHHHHHHhhCC-CeEEEccCcccChh
Q 006029 565 HSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLN-REIILGSTSLDDPP 643 (664)
Q Consensus 565 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVf~iGGvTysEi~al~~L~~~~~-~~iiigsT~Ii~~~ 643 (664)
+.+..+. .| +++.. .+..+++++|||+||+||.|++++++++++.+ ++|++|||.|+||.
T Consensus 508 -s~~~~~~-k~-~~~~~----------------~~~~~~~~~VfviGG~ty~E~~~~~e~~~~~~~~~ii~Gst~iltp~ 568 (582)
T COG5158 508 -SLRLSRP-KG-RSRSN----------------KKIPQQRILVFVIGGVTYEELRVLYELNESQNSVRIIYGSTEILTPA 568 (582)
T ss_pred -ceeeccc-cc-ccccc----------------cccccceEEEEEECCeehHHHHHHHHHHhhcCCeeEEEcCCceecHH
Confidence 1111111 12 11110 01267899999999999999999999999988 99999999999999
Q ss_pred HHHHHHhccCCC
Q 006029 644 QFITKMKMLTVD 655 (664)
Q Consensus 644 ~fl~~l~~l~~~ 655 (664)
+||+++..++.+
T Consensus 569 e~l~~v~~~~~~ 580 (582)
T COG5158 569 EFLDEVKRLGGS 580 (582)
T ss_pred HHHHHHHHhccc
Confidence 999999988653
No 6
>KOG1301 consensus Vesicle trafficking protein Sly1 (Sec1 family) [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.4e-81 Score=648.12 Aligned_cols=570 Identities=23% Similarity=0.390 Sum_probs=449.3
Q ss_pred CchhHHHHHHHHHHHHHHHhcc----CCC-CCCCeEEEEEeccchhHhhhccCchhhhhcCceEEeeccCCCCCCCCCeE
Q 006029 14 DYKNFKQISRERLLYEMLRSAK----TGT-SKSTWKVLIMDKLTVKIMSHSCKMADITQEGVSLVEDIHRRRQPLPSMEA 88 (664)
Q Consensus 14 ~~~~l~~~~~~~l~~~~l~~v~----~~~-~~~~~KvLilD~~~~~ils~~~~~s~L~~~gV~~i~~l~~~R~~~~~~~a 88 (664)
...+||+.+=..|. .||.--+ .+. +++.|||||+|..++.|||++++++||++||||++..|...|+|+|+++|
T Consensus 8 ~~~slRe~Qi~al~-~mlnLN~~~~~~~~~~epvWKVLI~Dr~gq~iISpll~VkeLRe~GvTlH~li~~dR~Pi~DVPA 86 (621)
T KOG1301|consen 8 AAASLRERQIVALK-KMLNLNKPVNKNGTAAEPVWKVLILDRFGQDIISPLLRVKELREHGITLHLLITSDRDPIPDVPA 86 (621)
T ss_pred hhhhHHHHHHHHHH-HHHHhcCCccccccccCCceEEEEEecccchhhcccccHHHHHhcCcEEEEeeccccCCCCCCCe
Confidence 35678888888887 5875322 122 26779999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHHHhccCCCCcceEEEEecCCCCHHHHHHHHh---cCCccccccceeEEecceEeccCCceeeCCc
Q 006029 89 IYFIQPTKENVIMFLSDMSGRSPLYKKAFVFFSSPISRELVTHIKK---DSTVLPRIGALREMNLEYFAIDSQGFVTDDE 165 (664)
Q Consensus 89 Iy~i~Pt~~~i~~i~~d~~~~~~~y~~~~i~F~~~~~~~~le~la~---~~~~~~~i~~i~e~~~df~pld~~lfsl~~~ 165 (664)
||||+||.+|+++|++|+++ ..|.+||++|++++||..+|.||. +.|...+|.++++.+++|+.+|+|+|+|.++
T Consensus 87 VYFV~Pt~eNid~i~~Dl~~--~lY~~~ylNF~Ssi~R~~LE~lA~~a~~~g~v~~I~kVyDQYlnFI~LEddlFsL~~~ 164 (621)
T KOG1301|consen 87 VYFVSPTEENIDRIIQDLSK--GLYDSYYLNFISSISRSLLEDLASAASETGAVLQIHKVYDQYLNFIVLEDDLFSLGMQ 164 (621)
T ss_pred EEEeCCchHhHHHHHHHHHH--hhhhhheeeccccccHHHHHHHHHHHhhcchHHHHHHHHHhHhhheeecchhhhhccc
Confidence 99999999999999999975 699999999999999999999985 4688889999999999999999999999999
Q ss_pred chhhhhcCCCCCccchhHHHHHHHHHHHHHHHHhCCccEEEE-ccCCCccccccccccchHHHHHHHHHHHHHHHhhhhc
Q 006029 166 RALEELFGDEENSRRGDACLNVMASRIATVFASLREFPLVRY-RAAKSLDTMTMTTFSDLIPTKLAAGVWNCLMKYKQSI 244 (664)
Q Consensus 166 ~~~~~l~~~~~~~~~~~~~l~~ia~~L~sl~~~lg~~P~Ir~-~g~~~~~~~~~~~~~~~ia~~la~~l~~~l~~~~~~~ 244 (664)
++|..+..++..+...+..++.||++||++|.++|.+|.||| +|+ ++++||++|-+++++.+-..++..
T Consensus 165 ~~~~~~n~p~t~e~ei~~~~~~IvdgLF~v~vTlG~VPiIRcp~g~----------aAEmvA~kL~qKLRd~l~d~k~~l 234 (621)
T KOG1301|consen 165 NSFHAINRPSTTEEEINALMDRIVDGLFSVFVTLGEVPIIRCPKGG----------AAEMVARKLDQKLRDNLRDTKNNL 234 (621)
T ss_pred ccchhccCCCchHHHHHHHHHHHHHHHHHHheecccceeEECCCCC----------HHHHHHHHHHHHHHHHhHhhcccc
Confidence 999777776655556678899999999999999999999999 444 357899999999998886544432
Q ss_pred CC----CCCCCCeeEEEEcCCCCcccchhhhhhhhHHhhhhcccCCCeEEEeecCCCCCCCcceEEecCCCchHHHHhhh
Q 006029 245 EN----FPQTETCDLLILDRSVDQVAPIIHEWTYDAICRDLLNMEGNKYVHEVPSKTGGPPEKKEVLLEEHDPLWLELRH 320 (664)
Q Consensus 245 ~~----~~~~~~~~LiIlDR~~D~~TPLlh~~TYqaLi~el~~I~~~~v~~~~~~~~g~~~~~k~~~l~~~D~~~~~~R~ 320 (664)
.. +-..++|+|+|+||++|++||+.|.||||||+||+|+++.|+|+++.+. .+..+|.+.|+.+|+||....+
T Consensus 235 ft~~~~~~~~~RPvLvl~DRn~Dlat~l~HtWtYqaLvhDvl~l~lN~vtv~~~~---~~~~~k~yDld~~D~fW~~n~~ 311 (621)
T KOG1301|consen 235 FTMDGGGAGFQRPVLVLLDRNIDLATPLHHTWTYQALVHDVLDLELNRVTLESES---KRKKKKSYDLDPNDKFWRRNKG 311 (621)
T ss_pred eeccCcccCCCCceEEEEecccccccccccceehHHHHHHHHhcccceEEeeccc---cCCCCccccCCCccHHHHhcCC
Confidence 11 1113689999999999999999999999999999999999999998643 2345788999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHhHHHHhhh--c---ccC---CCCCCHHHHHHHHHhccchHHHHhhHHHHHHHHHHHHHHH
Q 006029 321 AHIADASERLHEKMTSFISKNKAAQIQH--S---ARD---GGELSTKDLQKMVQALPQYSDQIDKLSLHVEIAGKINKII 392 (664)
Q Consensus 321 ~~~~~v~~~l~~~~~~~~~~~~~~~~~~--~---~~~---~~~~s~~~~~~~v~~lp~~~~~~~~l~~H~~i~~~i~~~~ 392 (664)
..|++|++.|.+++.+|+++. +++++ | ..+ +...+...++++|++||++.++++.+++|+|||.++++++
T Consensus 312 ~pFP~VAE~Ve~eL~~Yk~~~--~ei~r~~G~sg~~e~~~~~~~Dtt~l~~aV~sLPEL~ekK~~ID~HtnIatalL~~I 389 (621)
T KOG1301|consen 312 SPFPEVAENVEEELESYKNEE--AEIKRKMGLSGEDEGAIDELNDTTKLQSAVSSLPELTEKKRLIDLHTNIATALLEQI 389 (621)
T ss_pred CCCchHHHHHHHHHHHHHhhH--HHHHhhcCCCcccccccccccchHHHHHHHHHhHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999998754 34543 1 111 1123445999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHHhhcCCCChHHHHHhhhcCCCCChhhHHHHHHHHHHhCCCCCChhHH---HHHHHHcCCChhHHHHH
Q 006029 393 RELRLRELGQLEQDLVFGDAGLKDVVKFFTTNEDVSRENKLRLLMILAAIYPEKFQGEKG---QNIMKLARLQSDDITAV 469 (664)
Q Consensus 393 ~~~~l~~~~~lEq~i~~g~~~~~~l~~~i~~~~~~~~~dkLRLl~L~~l~~~~g~~~~~~---~~llq~~g~~~~~~~~l 469 (664)
+.|+|+.++++|+++.++ .....+++.+.+....+++||||+++||.++.. -+..+++ +..++..|.+...+..+
T Consensus 390 keR~lD~ff~~E~~~~~~-~l~~~~l~~~~~~~~gt~EDkLR~~Ii~~ls~e-t~~~s~le~~e~al~e~~~d~~Al~yv 467 (621)
T KOG1301|consen 390 KERKLDDFFEVEKKIMST-TLDRSLLDILEDGEAGTPEDKLRLFIIYYLSTE-TVPQSDLEAVENALTEAGCDLNALKYV 467 (621)
T ss_pred HHhhhhHHHHHhcccccc-cccHHHHHHHhcccCCChHHHHHHHHHHHHhhc-cccHHHHHHHHHHHHhcCCchHHHHHH
Confidence 999999999999999873 223567787776556899999999999999974 4445444 45677889887888888
Q ss_pred HHHHHhcCccccCCCCC---CCCCchhh----------hhhhhcccccCCCCCccccccccccHHHHHHHHHHhcCCC--
Q 006029 470 NNMRLLGGASDIKKSST---GAFSLKFD----------INKKKRAVRKDRTGEEQTWQLSRFYPMIEELIEKLGKREL-- 534 (664)
Q Consensus 470 ~~L~~lg~~~~~~~~~~---~~~~~~f~----------~~k~~~~~~~~~~~~~~~y~~s~y~Pli~~lve~~~~~~l-- 534 (664)
.++..+.-......... .++..+|. +..-++++.+.. -.| +.++||.+..++-
T Consensus 468 kr~k~~~~~~s~~~~~~~~~t~~~~~~~kl~~qg~~~vm~GVKNLlp~~q-----------~lP-vT~iveal~~~~sn~ 535 (621)
T KOG1301|consen 468 KRLKEITKMSSATSAYSGTTTKIVDLFEKLYSQGSSFVMEGVKNLLPKKQ-----------NLP-VTRIVEALMDPKSNP 535 (621)
T ss_pred HHHHHHhhcccccccccCCcccHHHHHHHHhhccHHHHHhhHHhcCcccc-----------cCc-HHHHHHHhhCCCCCc
Confidence 77765433222111100 11111111 111122222211 122 6899999987764
Q ss_pred CCCCCCccCCCCCCccccccccccCCCcccccccCCCCCcccCCCCCCCCCCccchhcccccccccCCcEEEEEEEcCcC
Q 006029 535 PKDDYPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGAT 614 (664)
Q Consensus 535 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viVf~iGGvT 614 (664)
..++|.|++ |... +|+ .+.... .+.+.++.|||||||.+
T Consensus 536 etddYl~~D-Pk~~-k~~------------~~~~~~---------------------------~r~~f~eaIVFvVGGGN 574 (621)
T KOG1301|consen 536 ETDDYLYFD-PKLS-KGG------------SSSLPI---------------------------KRQPFQEAIVFVVGGGN 574 (621)
T ss_pred cccceEeec-cccc-cCC------------Cccccc---------------------------cccchhheEEEEEcCcC
Confidence 346688876 4321 110 000000 11256789999999999
Q ss_pred HHHHHHHHHHHhhC--CCeEEEccCcccChhHHHHHHhccCCCC
Q 006029 615 RSELRVCHKLTRKL--NREIILGSTSLDDPPQFITKMKMLTVDE 656 (664)
Q Consensus 615 ysEi~al~~L~~~~--~~~iiigsT~Ii~~~~fl~~l~~l~~~~ 656 (664)
|-|+..|.++.++. .++|++|+|+|+||.+|++++..|+.+-
T Consensus 575 YiEYqnL~d~~krq~~~krIiYGsTeIln~~eFl~qls~Lg~~~ 618 (621)
T KOG1301|consen 575 YIEYQNLVDLAKRQQTVKRIIYGSTEILNAREFLEQLSRLGLKM 618 (621)
T ss_pred eeehhhHHHHHHhhcccceeEecchhcCCHHHHHHHHHHhcccc
Confidence 99999999998765 4899999999999999999999998763
No 7
>PRK05581 ribulose-phosphate 3-epimerase; Validated
Probab=48.30 E-value=22 Score=35.16 Aligned_cols=44 Identities=14% Similarity=0.452 Sum_probs=34.1
Q ss_pred EEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhcc
Q 006029 605 IFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 652 (664)
Q Consensus 605 viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~l 652 (664)
+.|.+.||+|-..++.+.. .|.++++.++.|++.++....++.+
T Consensus 171 ~~i~v~GGI~~~nv~~l~~----~GaD~vvvgSai~~~~d~~~~~~~~ 214 (220)
T PRK05581 171 ILIEVDGGINADNIKECAE----AGADVFVAGSAVFGAPDYKEAIDSL 214 (220)
T ss_pred ceEEEECCCCHHHHHHHHH----cCCCEEEEChhhhCCCCHHHHHHHH
Confidence 5677889999977666655 5899999999999877766555543
No 8
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=43.85 E-value=26 Score=35.00 Aligned_cols=45 Identities=13% Similarity=0.296 Sum_probs=33.9
Q ss_pred EEEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhcc
Q 006029 604 RIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 652 (664)
Q Consensus 604 ~viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~l 652 (664)
.+.|.+.||||-..++.+.+ .|.++++.++.|+..+++-+.++.+
T Consensus 167 ~~~I~vdGGI~~eni~~l~~----aGAd~vVvGSaIf~~~d~~~~i~~l 211 (220)
T PRK08883 167 DIRLEIDGGVKVDNIREIAE----AGADMFVAGSAIFGQPDYKAVIDEM 211 (220)
T ss_pred CeeEEEECCCCHHHHHHHHH----cCCCEEEEeHHHhCCCCHHHHHHHH
Confidence 47788899999776665554 4999999999999766665555544
No 9
>PF14071 YlbD_coat: Putative coat protein
Probab=41.97 E-value=23 Score=31.80 Aligned_cols=14 Identities=43% Similarity=0.895 Sum_probs=12.6
Q ss_pred EecCCCchHHHHhh
Q 006029 306 VLLEEHDPLWLELR 319 (664)
Q Consensus 306 ~~l~~~D~~~~~~R 319 (664)
++|.++|++|..+|
T Consensus 32 ~LlGEdD~~W~~Yk 45 (124)
T PF14071_consen 32 YLLGEDDPIWDPYK 45 (124)
T ss_pred HHhCCCcchHHHhh
Confidence 57789999999999
No 10
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.
Probab=41.94 E-value=28 Score=33.37 Aligned_cols=45 Identities=13% Similarity=0.111 Sum_probs=33.6
Q ss_pred EEEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhcc
Q 006029 604 RIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 652 (664)
Q Consensus 604 ~viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~l 652 (664)
.+-|++.||+|-..+..+.. .|.+.++.++.++..++....+..+
T Consensus 150 ~~pv~a~GGi~~~~i~~~~~----~Ga~~i~~g~~i~~~~~~~~~~~~l 194 (196)
T cd00564 150 EIPVVAIGGITPENAAEVLA----AGADGVAVISAITGADDPAAAAREL 194 (196)
T ss_pred CCCEEEECCCCHHHHHHHHH----cCCCEEEEehHhhcCCCHHHHHHHH
Confidence 35689999999876665554 4899999999998766666666544
No 11
>PLN02334 ribulose-phosphate 3-epimerase
Probab=41.42 E-value=25 Score=35.19 Aligned_cols=44 Identities=14% Similarity=0.278 Sum_probs=33.9
Q ss_pred EEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhcc
Q 006029 605 IFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 652 (664)
Q Consensus 605 viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~l 652 (664)
+-|.++||+|-.-++.+.. .|.++++.++.|+..++.-+.++.+
T Consensus 175 ~~I~a~GGI~~e~i~~l~~----aGad~vvvgsai~~~~d~~~~~~~l 218 (229)
T PLN02334 175 LDIEVDGGVGPSTIDKAAE----AGANVIVAGSAVFGAPDYAEVISGL 218 (229)
T ss_pred CcEEEeCCCCHHHHHHHHH----cCCCEEEEChHHhCCCCHHHHHHHH
Confidence 4689999999887777665 3889999999999877765555543
No 12
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed
Probab=33.24 E-value=41 Score=32.92 Aligned_cols=43 Identities=9% Similarity=0.093 Sum_probs=31.8
Q ss_pred EEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhc
Q 006029 605 IFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKM 651 (664)
Q Consensus 605 viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~ 651 (664)
+-|++.||||-..++.+.. .|.+.+++++.|....+..+.+..
T Consensus 161 ~~v~a~GGI~~~~i~~~~~----~Ga~gv~~gs~i~~~~d~~~~~~~ 203 (212)
T PRK00043 161 IPIVAIGGITPENAPEVLE----AGADGVAVVSAITGAEDPEAAARA 203 (212)
T ss_pred CCEEEECCcCHHHHHHHHH----cCCCEEEEeHHhhcCCCHHHHHHH
Confidence 6789999999766665544 489999999999876665544443
No 13
>TIGR00693 thiE thiamine-phosphate pyrophosphorylase. This model includes ThiE from Bacillus subtilis but excludes its paralog, the regulatory protein TenI, and neighbors of TenI.
Probab=29.18 E-value=61 Score=31.31 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=31.6
Q ss_pred EEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHh
Q 006029 605 IFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMK 650 (664)
Q Consensus 605 viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~ 650 (664)
+-|+.+||+|-..++.+. ..|.+.+.+++.|...++-...+.
T Consensus 153 ~pv~a~GGI~~~~~~~~~----~~G~~gva~~~~i~~~~dp~~~~~ 194 (196)
T TIGR00693 153 IPIVAIGGITLENAAEVL----AAGADGVAVVSAIMQAADPKAAAK 194 (196)
T ss_pred CCEEEECCcCHHHHHHHH----HcCCCEEEEhHHhhCCCCHHHHHH
Confidence 458999999976665443 359999999999998776655544
No 14
>TIGR01163 rpe ribulose-phosphate 3-epimerase. This family consists of Ribulose-phosphate 3-epimerase, also known as pentose-5-phosphate 3-epimerase (PPE). PPE converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. It has been found in a wide range of bacteria, archebacteria, fungi and plants.
Probab=28.84 E-value=66 Score=31.33 Aligned_cols=44 Identities=14% Similarity=0.378 Sum_probs=32.6
Q ss_pred EEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhcc
Q 006029 605 IFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 652 (664)
Q Consensus 605 viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~l 652 (664)
+-|++.||+|-.- +.++. +.|.+.++.++.|+++.+.-..++.+
T Consensus 166 ~~i~v~GGI~~en---v~~l~-~~gad~iivgsai~~~~d~~~~~~~~ 209 (210)
T TIGR01163 166 ILIEVDGGVNDDN---ARELA-EAGADILVAGSAIFGADDYKEVIRSL 209 (210)
T ss_pred ceEEEECCcCHHH---HHHHH-HcCCCEEEEChHHhCCCCHHHHHHHh
Confidence 5588999999644 44433 45899999999999888876666543
No 15
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional
Probab=25.87 E-value=64 Score=32.38 Aligned_cols=45 Identities=11% Similarity=0.259 Sum_probs=33.8
Q ss_pred EEEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhcc
Q 006029 604 RIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 652 (664)
Q Consensus 604 ~viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~l 652 (664)
.+.|-|-||||-..+..+.. .|.+++|.++.|+..++..+.+..+
T Consensus 173 ~~~I~VdGGI~~~ti~~~~~----aGad~iVvGsaI~~a~d~~~~~~~i 217 (228)
T PTZ00170 173 HLNIQVDGGINLETIDIAAD----AGANVIVAGSSIFKAKDRKQAIELL 217 (228)
T ss_pred cCeEEECCCCCHHHHHHHHH----cCCCEEEEchHHhCCCCHHHHHHHH
Confidence 36788999999987776654 3899999999998766665554443
No 16
>PF12327 FtsZ_C: FtsZ family, C-terminal domain; InterPro: IPR024757 The FtsZ family of proteins are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin []. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea []. This entry represents a domain of FtsZ. In most FtsZ proteins is found in the C terminus, except in some alphaproteobacteria proteins where there is an extension C-terminal domain TIGR03483 from TIGRFAMs.; PDB: 2RHO_B 2RHJ_A 2VXY_A 2RHL_B 2RHH_A 2VAM_A 1W5F_B 2R75_1 2R6R_1 1RQ7_A ....
Probab=24.06 E-value=1.3e+02 Score=25.72 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=26.4
Q ss_pred CCcEEEEEEEcC--cCHHHHHHHH-HHHhhC--CCeEEEccC
Q 006029 601 MGQRIFVFIVGG--ATRSELRVCH-KLTRKL--NREIILGST 637 (664)
Q Consensus 601 ~~~~viVf~iGG--vTysEi~al~-~L~~~~--~~~iiigsT 637 (664)
.-+.++|-|.|| +|+.|+..+- .+.+.. ..+|++|.+
T Consensus 35 ~A~~vLvni~~~~d~~l~ev~~~~~~i~~~~~~~a~ii~G~~ 76 (95)
T PF12327_consen 35 GAKGVLVNITGGPDLSLSEVNEAMEIIREKADPDANIIWGAS 76 (95)
T ss_dssp G-SEEEEEEEE-TTS-HHHHHHHHHHHHHHSSTTSEEEEEEE
T ss_pred HhceEEEEEEcCCCCCHHHHHHHHHHHHHHhhcCceEEEEEE
Confidence 357899999998 7899998774 555554 578888865
No 17
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=23.45 E-value=99 Score=30.01 Aligned_cols=44 Identities=11% Similarity=0.318 Sum_probs=32.6
Q ss_pred EEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhcc
Q 006029 605 IFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 652 (664)
Q Consensus 605 viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~l 652 (664)
+-|++.||+|-.-++.+. ..|.+.++.++.|++..+....++.+
T Consensus 167 ~pi~v~GGI~~env~~~~----~~gad~iivgsai~~~~~~~~~~~~~ 210 (211)
T cd00429 167 LLIEVDGGINLETIPLLA----EAGADVLVAGSALFGSDDYAEAIKEL 210 (211)
T ss_pred eEEEEECCCCHHHHHHHH----HcCCCEEEECHHHhCCCCHHHHHHHh
Confidence 568899999975544433 34889999999999888776666543
No 18
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=22.48 E-value=1.1e+02 Score=30.66 Aligned_cols=46 Identities=11% Similarity=0.270 Sum_probs=34.5
Q ss_pred cEEEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhcc
Q 006029 603 QRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKML 652 (664)
Q Consensus 603 ~~viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~l 652 (664)
..+.|-|=|||+-.-++.+.+ .|.+++|+|+.|+..++.-+.++.+
T Consensus 170 ~~~~IeVDGGI~~eti~~l~~----aGaDi~V~GSaiF~~~d~~~~~~~l 215 (223)
T PRK08745 170 KPIRLEIDGGVKADNIGAIAA----AGADTFVAGSAIFNAPDYAQVIAQM 215 (223)
T ss_pred CCeeEEEECCCCHHHHHHHHH----cCCCEEEEChhhhCCCCHHHHHHHH
Confidence 358899999999887766554 3899999999999765555544443
No 19
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=22.26 E-value=86 Score=34.22 Aligned_cols=44 Identities=14% Similarity=0.273 Sum_probs=31.2
Q ss_pred cEEEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHh
Q 006029 603 QRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMK 650 (664)
Q Consensus 603 ~~viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~ 650 (664)
..+.|.+.||||-.-+..+. +.|.+++|.++.|...++.-+.++
T Consensus 329 ~~~~I~VdGGI~~eti~~l~----~aGADivVVGsaIf~a~Dp~~aak 372 (391)
T PRK13307 329 GKILVAVAGGVRVENVEEAL----KAGADILVVGRAITKSKDVRRAAE 372 (391)
T ss_pred CCCcEEEECCcCHHHHHHHH----HcCCCEEEEeHHHhCCCCHHHHHH
Confidence 35789999999966644433 358999999999986655443333
No 20
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=22.25 E-value=96 Score=30.22 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=30.1
Q ss_pred EEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHh
Q 006029 605 IFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMK 650 (664)
Q Consensus 605 viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~ 650 (664)
+.|.+.||+|..-+..+. ..|.+.++.++.|.+.++.-+.++
T Consensus 159 ~~i~v~GGI~~~n~~~~~----~~Ga~~v~vGsai~~~~d~~~~~~ 200 (206)
T TIGR03128 159 ARVAVAGGINLDTIPDVI----KLGPDIVIVGGAITKAADPAEAAR 200 (206)
T ss_pred CcEEEECCcCHHHHHHHH----HcCCCEEEEeehhcCCCCHHHHHH
Confidence 456778999988766443 358998888888997655544443
No 21
>PRK10039 hypothetical protein; Provisional
Probab=21.98 E-value=1.6e+02 Score=26.58 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=28.4
Q ss_pred cCcCHHHHHHHHHHHhhCC----CeEEE-ccCcccChhHHHHHHh
Q 006029 611 GGATRSELRVCHKLTRKLN----REIIL-GSTSLDDPPQFITKMK 650 (664)
Q Consensus 611 GGvTysEi~al~~L~~~~~----~~iii-gsT~Ii~~~~fl~~l~ 650 (664)
||.|--|.|+++|+....+ +.+++ ..+.-++-+..++.++
T Consensus 81 GGlS~VE~R~l~Ela~ga~~~~~~~v~~~~~~~pLsD~evi~~~~ 125 (127)
T PRK10039 81 GGLSQVEERILIELAVGSTPKGYRQLYIHPQSVPLSDSAVIQIIK 125 (127)
T ss_pred CCccHHHHHHHHHHHhhhcccccceEEEeCCCCcCCHHHHHHHHh
Confidence 9999999999999987543 24444 4444567666666654
No 22
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=21.70 E-value=1.1e+02 Score=29.48 Aligned_cols=45 Identities=13% Similarity=0.212 Sum_probs=32.1
Q ss_pred cEEEEEEEcCcCHHHHHHHHHHHhhCCCeEEEccCcccChhHHHHHHhc
Q 006029 603 QRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKM 651 (664)
Q Consensus 603 ~~viVf~iGGvTysEi~al~~L~~~~~~~iiigsT~Ii~~~~fl~~l~~ 651 (664)
..+.|.+.||||-.- +.++. +.|.+.++.++.|...++.-+.+++
T Consensus 157 ~~~~i~~~GGI~~~~---i~~~~-~~Gad~vvvGsai~~~~d~~~~~~~ 201 (202)
T cd04726 157 LGVKVAVAGGITPDT---LPEFK-KAGADIVIVGRAITGAADPAEAARE 201 (202)
T ss_pred cCCCEEEECCcCHHH---HHHHH-hcCCCEEEEeehhcCCCCHHHHHhc
Confidence 357899999999543 33332 3499999999999987776555543
Done!