BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006031
(664 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 157/298 (52%), Gaps = 32/298 (10%)
Query: 374 GEAQLYTLDQLMRAS-----AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEM 428
G+ + ++L +L AS +LG+G G YK L + +V VKRL + G +
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ- 73
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
++ +E + H NL+ LR + ERLL+Y Y NGS+ S + ++ PL W
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-PLDWPK 132
Query: 489 CLKIAEDVAQGLSYIHQAW--RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546
+IA A+GL+Y+H +++H ++K++N+LL +FEA + D+ L L +D
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXH 190
Query: 547 PDNLL-----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNE---MM 598
+ + APE + +++ K+DV+ +GV+LLEL+TG+ + L ++ ++
Sbjct: 191 VXXAVRGXIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 599 NWVRSAREDDGAE------------DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
+WV+ ++ E DE + L++VA+ C +SP +RP M +V++ML+
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 157/302 (51%), Gaps = 40/302 (13%)
Query: 374 GEAQLYTLDQLMRAS-----AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEM 428
G+ + ++L +L AS +LG+G G YK L + +V VKRL + G +
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ- 81
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
++ +E + H NL+ LR + ERLL+Y Y NGS+ S + ++ PL W
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-PLDWPK 140
Query: 489 CLKIAEDVAQGLSYIHQAW--RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546
+IA A+GL+Y+H +++H ++K++N+LL +FEA + D+ L L D
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM------DY 194
Query: 547 PD---------NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNE- 596
D + + APE + +++ K+DV+ +GV+LLEL+TG+ + L ++
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 597 --MMNWVRSAREDDGAE------------DERLGMLLEVAIACNSASPEQRPTMWQVLKM 642
+++WV+ ++ E DE + L++VA+ C +SP +RP M +V++M
Sbjct: 254 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 643 LQ 644
L+
Sbjct: 314 LE 315
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 29/278 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEM---YEQHMESVGGLRHPNLVPLR 448
+G+G G YK ++N V VK+L A+ + T+ E+ ++Q ++ + +H NLV L
Sbjct: 33 MGEGGFGVVYKGYVNNT-TVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ ++ L+Y Y PNGSL + T PL W KIA+ A G++++H+
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHENHH 148
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQA 564
+H ++KS+N+LL F A ++D+ L + Q ++ Y APE +
Sbjct: 149 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EI 205
Query: 565 TSKSDVYSFGVLLLELLTGKPP-SQH------------SFLVPNEMMNWVRSAREDDGAE 611
T KSD+YSFGV+LLE++TG P +H + +++ D A+
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND--AD 263
Query: 612 DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649
+ + VA C +RP + +V ++LQE+ +
Sbjct: 264 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 29/278 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEM---YEQHMESVGGLRHPNLVPLR 448
+G+G G YK ++N V VK+L A+ + T+ E+ ++Q ++ + +H NLV L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ ++ L+Y Y PNGSL + T PL W KIA+ A G++++H+
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQA 564
+H ++KS+N+LL F A ++D+ L + Q ++ Y APE +
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EI 211
Query: 565 TSKSDVYSFGVLLLELLTGKPP-SQH------------SFLVPNEMMNWVRSAREDDGAE 611
T KSD+YSFGV+LLE++TG P +H + +++ D A+
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND--AD 269
Query: 612 DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649
+ + VA C +RP + +V ++LQE+ +
Sbjct: 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 29/278 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEM---YEQHMESVGGLRHPNLVPLR 448
+G+G G YK ++N V VK+L A+ + T+ E+ ++Q ++ + +H NLV L
Sbjct: 39 MGEGGFGVVYKGYVNN-TTVAVKKL-AAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ ++ L+Y Y PNGSL + T PL W KIA+ A G++++H+
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHENHH 154
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQA 564
+H ++KS+N+LL F A ++D+ L + Q ++ Y APE +
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EI 211
Query: 565 TSKSDVYSFGVLLLELLTGKPP-SQH------------SFLVPNEMMNWVRSAREDDGAE 611
T KSD+YSFGV+LLE++TG P +H + +++ D A+
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND--AD 269
Query: 612 DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649
+ + VA C +RP + +V ++LQE+ +
Sbjct: 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 393 GKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEM---YEQHMESVGGLRHPNLVPLRA 449
G+G G YK ++N V VK+L A+ + T+ E+ ++Q ++ +H NLV L
Sbjct: 31 GEGGFGVVYKGYVNN-TTVAVKKL-AAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+ ++ L+Y Y PNGSL + T PL W KIA+ A G++++H+
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLSWHXRCKIAQGAANGINFLHENHH- 145
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQAT 565
+H ++KS+N+LL F A ++D+ L + Q ++ Y APE + T
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG--EIT 203
Query: 566 SKSDVYSFGVLLLELLTGKPP-SQH------------SFLVPNEMMNWVRSAREDDGAED 612
KSD+YSFGV+LLE++TG P +H + +++ D A+
Sbjct: 204 PKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXND--ADS 261
Query: 613 ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+ VA C +RP + +V ++LQE
Sbjct: 262 TSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 120/273 (43%), Gaps = 26/273 (9%)
Query: 391 LLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
L+G G G YK VL + V +KR G E S RHP+LV L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF--CRHPHLVSLIGF 103
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ E +LIY Y NG+L ++GS + W L+I A+GL Y+H ++
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTR-AII 161
Query: 511 HGNLKSSNVLLGPDFEACLADYCL----TALTADSLQDDDPDNLLYKAPETRNASHQATS 566
H ++KS N+LL +F + D+ + T L L L Y PE + T
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEY-FIKGRLTE 220
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED---------------DGAE 611
KSDVYSFGV+L E+L + S +P EM+N A E D
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQS--LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278
Query: 612 DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
E L + A+ C + S E RP+M VL L+
Sbjct: 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 120/273 (43%), Gaps = 26/273 (9%)
Query: 391 LLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
L+G G G YK VL + V +KR G E S RHP+LV L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF--CRHPHLVSLIGF 103
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ E +LIY Y NG+L ++GS + W L+I A+GL Y+H ++
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTR-AII 161
Query: 511 HGNLKSSNVLLGPDFEACLADYCL----TALTADSLQDDDPDNLLYKAPETRNASHQATS 566
H ++KS N+LL +F + D+ + T L L L Y PE + T
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEY-FIKGRLTE 220
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED---------------DGAE 611
KSDVYSFGV+L E+L + S +P EM+N A E D
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIVQS--LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIR 278
Query: 612 DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
E L + A+ C + S E RP+M VL L+
Sbjct: 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 123/258 (47%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 77
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 130
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S +DD L Y PE K
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMH-DEK 189
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 244
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 245 KHN---PSQRPMLREVLE 259
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 22/269 (8%)
Query: 392 LGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMYEQHMES------VGGLRHPNL 444
+GKG G +K ++ ++ +V +K L G + EM E+ E + L HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET-EMIEKFQEFQREVFIMSNLNHPNI 85
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI- 503
V L ++ ++ P G L+ + +A P+ W+ L++ D+A G+ Y+
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 504 HQAWRLVHGNLKSSNVLLGPDFE-----ACLADYCLTALTADSLQDDDPDNLLYKAPETR 558
+Q +VH +L+S N+ L E A +AD+ L+ + S+ N + APET
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLL-GNFQWMAPETI 198
Query: 559 NASHQA-TSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
A ++ T K+D YSF ++L +LTG+ P + +N +R ++
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
L V C S P++RP ++K L E+
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 22/269 (8%)
Query: 392 LGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMYEQHMES------VGGLRHPNL 444
+GKG G +K ++ ++ +V +K L G + EM E+ E + L HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET-EMIEKFQEFQREVFIMSNLNHPNI 85
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI- 503
V L ++ ++ P G L+ + +A P+ W+ L++ D+A G+ Y+
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 504 HQAWRLVHGNLKSSNVLLGPDFE-----ACLADYCLTALTADSLQDDDPDNLLYKAPETR 558
+Q +VH +L+S N+ L E A +AD+ L+ + S+ N + APET
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLL-GNFQWMAPETI 198
Query: 559 NASHQA-TSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
A ++ T K+D YSF ++L +LTG+ P + +N +R ++
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
L V C S P++RP ++K L E+
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 100
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 153
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S +DD L Y PE K
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMH-DEK 212
Query: 568 SDVYSFGVLLLELLTGKPP 586
D++S GVL E L GKPP
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + D L Y PE K
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEK 186
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 241
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 242 KHN---PSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + D L Y PE K
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEK 186
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 241
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 242 KHN---PSQRPMLREVLE 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 75
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 128
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S +D L Y PE K
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMH-DEK 187
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 242
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 243 KHN---PSQRPMLREVLE 257
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 75
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 128
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + D L Y PE K
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEK 187
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 242
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 243 KHN---PSQRPMLREVLE 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 79
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 132
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + D L Y PE K
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEK 191
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 192 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 242
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 243 SRLLKHN---PSQRPMLREVLE 261
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 22/269 (8%)
Query: 392 LGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMYEQHMES------VGGLRHPNL 444
+GKG G +K ++ ++ +V +K L G + EM E+ E + L HPN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET-EMIEKFQEFQREVFIMSNLNHPNI 85
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI- 503
V L ++ ++ P G L+ + +A P+ W+ L++ D+A G+ Y+
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 504 HQAWRLVHGNLKSSNVLLGPDFE-----ACLADYCLTALTADSLQDDDPDNLLYKAPETR 558
+Q +VH +L+S N+ L E A +AD+ + + S+ N + APET
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLL-GNFQWMAPETI 198
Query: 559 NASHQA-TSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
A ++ T K+D YSF ++L +LTG+ P + +N +R ++
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
L V C S P++RP ++K L E+
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 24/272 (8%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E +G GS GT ++A + ++ A NE + + + + LRHPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMG 101
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH-QAWR 508
++ +Y GSL+ L+H KS + L L +A DVA+G++Y+H +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDDDPDNLLYKAPETRNASHQATS 566
+VH NLKS N+L+ + + D+ L+ L A + + APE +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR-DEPSNE 218
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM-------LL 619
KSDVYSFGV+L EL T + P + L P +++ V G + +RL + +
Sbjct: 219 KSDVYSFGVILWELATLQQPWGN--LNPAQVVAAV-------GFKCKRLEIPRNLNPQVA 269
Query: 620 EVAIACNSASPEQRPTMWQVLKMLQE-IKGAV 650
+ C + P +RP+ ++ +L+ IK AV
Sbjct: 270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAVLDNR-LIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A R I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 71
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 124
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 183
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 238
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 239 KHN---PSQRPMLREVLE 253
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 79
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G ++ + SK + + + ++A LSY H
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------ELANALSYCHSK- 132
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMH-DEK 191
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 192 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 242
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 243 SRLLKHN---PSQRPMLREVLE 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 78
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
YF LI +Y P G+++ + K +R + + ++A LSY H R
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYIT---ELANALSYCHSK-R 132
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKS 568
++H ++K N+LLG + E +AD+ + S +D L Y PE K
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMH-DEKV 191
Query: 569 DVYSFGVLLLELLTGKPPSQ-HSF 591
D++S GVL E L G PP + H++
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTY 215
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + + L Y PE K
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMH-DEK 186
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 241
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 242 KHN---PSQRPMLREVLE 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 79
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G ++ + SK + + + ++A LSY H
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------ELANALSYCHSK- 132
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 191
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 192 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 242
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 243 SRLLKHN---PSQRPMLREVLE 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 75
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 128
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMH-DEK 187
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 188 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 238
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 239 SRLLKHN---PSQRPMLREVLE 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 78
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 131
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 190
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 245
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 246 KHN---PSQRPMLREVLE 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 77
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 130
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 189
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 244
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 245 KHN---PSQRPMLREVLE 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 73
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 74 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 126
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 185
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 240
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 241 KHN---PSQRPMLREVLE 255
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 18/249 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 83 -SEEPIYIVIEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 137
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA-ALYGRFTIKS 196
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 627 SASPEQRPT 635
PE+RPT
Sbjct: 253 RKDPEERPT 261
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 73 -SEEPIXIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 127
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA-ALYGRFTIKS 186
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 187 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 242
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 243 RKEPEERPTF 252
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMH-DEK 186
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 241
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 242 KHN---PSQRPMLREVLE 256
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 79
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 132
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXH-DEK 191
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 192 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 242
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 243 SRLLKHN---PSQRPXLREVLE 261
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 77
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 130
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEK 189
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 244
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 245 KHN---PSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEK 186
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 241
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 242 KHN---PSQRPMLREVLE 256
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 76 -SEEPIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 130
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 189
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 190 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 245
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 246 RKEPEERPTF 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 79
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 132
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 191
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 192 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 242
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 243 SRLLKHN---PSQRPMLREVLE 261
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 18/249 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 83 -SEEPIYIVIEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 137
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 196
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 627 SASPEQRPT 635
PE+RPT
Sbjct: 253 RKDPEERPT 261
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 186
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 241
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 242 KHN---PSQRPMLREVLE 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 77
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 130
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 189
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 190 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 240
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 241 SRLLKHN---PSQRPMLREVLE 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 18/249 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 83 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 137
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 196
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 627 SASPEQRPT 635
PE+RPT
Sbjct: 253 RKDPEERPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 18/249 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 83 -SEEPIYIVCEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 137
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 196
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 627 SASPEQRPT 635
PE+RPT
Sbjct: 253 RKDPEERPT 261
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 29/288 (10%)
Query: 390 ELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E++G G+ A + V +KR++ K + +E+ ++ ++++ HPN+V
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE-IQAMSQCHHPNIVSYY 79
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLK------IAEDVAQGLSY 502
F K+E L+ GS+ +I K AK H + L I +V +GL Y
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDII---KHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-------LTADSLQDDDPDNLLYKAP 555
+H+ + +H ++K+ N+LLG D +AD+ ++A +T + ++ + AP
Sbjct: 137 LHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE--DDGAEDE 613
E K+D++SFG+ +EL TG P H + +M +++ + G +D+
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELATGAAP-YHKYPPMKVLMLTLQNDPPSLETGVQDK 254
Query: 614 RL----GMLLEVAIA-CNSASPEQRPTMWQVL--KMLQEIKGAVLMED 654
+ G I+ C PE+RPT ++L K Q+ K +++
Sbjct: 255 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQE 302
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 72 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 126
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 185
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 186 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 241
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 242 RKDPEERPTF 251
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A N + I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 75 GYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
+++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH-DEK 186
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARD-----LISRLL 241
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 242 KHN---PSQRPMLREVLE 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 76
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 129
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEK 188
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 189 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 239
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 240 SRLLKHN---PSQRPMLREVLE 258
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 249 -SEEPIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 303
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 362
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 363 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 418
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 419 RKEPEERPTF 428
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 27/273 (9%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E++G G+ A + V +KR++ K + +E+ ++ ++++ HPN+V
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE-IQAMSQCHHPNIVSYY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLK------IAEDVAQGLSY 502
F K+E L+ GS+ +I K AK H + L I +V +GL Y
Sbjct: 75 TSFVVKDELWLVMKLLSGGSVLDII---KHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-------LTADSLQDDDPDNLLYKAP 555
+H+ + +H ++K+ N+LLG D +AD+ ++A +T + ++ + AP
Sbjct: 132 LHKNGQ-IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE--DDGAEDE 613
E K+D++SFG+ +EL TG P H + +M +++ + G +D+
Sbjct: 191 EVMEQVRGYDFKADIWSFGITAIELATGAAP-YHKYPPMKVLMLTLQNDPPSLETGVQDK 249
Query: 614 RL----GMLLEVAIA-CNSASPEQRPTMWQVLK 641
+ G I+ C PE+RPT ++L+
Sbjct: 250 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 249 -SEEPIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 303
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 362
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 363 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 418
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 419 RKEPEERPTF 428
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH-DEK 186
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 241
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 242 KHN---PSQRPMLREVLE 256
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 74 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 187
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 188 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 243
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 244 RKDPEERPTF 253
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 91/191 (47%), Gaps = 15/191 (7%)
Query: 40 PSDAQVLLAFKAKADLRNHLFFSQNKSLHFC---QWQGVIC----YQQKVVRVVLQGLDL 92
P D Q LL + K DL N S C W GV+C +V + L GL+L
Sbjct: 5 PQDKQALL--QIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 93 GGIFA-PNSLTKLDQLRVLGLQN-NSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLL 149
+ P+SL L L L + N+L GPIP ++ L L L++ H +G+ P L
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 150 SLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIF---NVS 206
+ L TLD SYN LSG LP ++S L + D NR +G+IP S K+F +S
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 207 GNNFTGAITVT 217
N TG I T
Sbjct: 183 RNRLTGKIPPT 193
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 98 PNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVN--LKSLFLDHNFFTGSFPPSLLSLHRLK 155
P S++ L L + N ++G IPD G + S+ + N TG PP+ +L+ L
Sbjct: 142 PPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LA 200
Query: 156 TLDLSYNNLSG--------------------PLPKELASQG---RLYSLRLDVNRFNGSI 192
+DLS N L G L +L G L L L NR G++
Sbjct: 201 FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTL 260
Query: 193 PP-LNQ-SSLKIFNVSGNNFTGAITVTSTLSRFGISSFLFNPSLCGE 237
P L Q L NVS NN G I L RF +S++ N LCG
Sbjct: 261 PQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 77
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 130
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH-DEK 189
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 190 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 240
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 241 SRLLKHN---PSQRPMLREVLE 259
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 16/249 (6%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + + V +K L + S E + + + + L+H LV L A
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTM---SPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + K + L + + +A VA G++YI + +H
Sbjct: 74 -SEEPIYIVTEYMNKGSLLDFL---KDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+S+N+L+G +AD+ L L D + + + + APE + T KS
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEA-ALYGRFTIKS 187
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNS 627
DV+SFG+LL EL+T G+ P + + E++ V +D + L E+ I C
Sbjct: 188 DVWSFGILLTELVTKGRVP--YPGMNNREVLEQVERGYRMPCPQDCPIS-LHELMIHCWK 244
Query: 628 ASPEQRPTM 636
PE+RPT
Sbjct: 245 KDPEERPTF 253
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 249 -SEEPIYIVGEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 303
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 362
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 363 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 418
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 419 RKEPEERPTF 428
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L K S E + Q + + LRH LV L A
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL---KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 250 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 304
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 363
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 364 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP--CPPECPESLHDLMCQCW 419
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 420 RKDPEERPTF 429
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 24/272 (8%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E +G GS GT ++A + ++ A NE + + + + LRHPN+V
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMG 101
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH-QAWR 508
++ +Y GSL+ L+H KS + L L +A DVA+G++Y+H +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSL--QDDDPDNLLYKAPETRNASHQATS 566
+VH +LKS N+L+ + + D+ L+ L A + APE +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLR-DEPSNE 218
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM-------LL 619
KSDVYSFGV+L EL T + P + L P +++ V G + +RL + +
Sbjct: 219 KSDVYSFGVILWELATLQQPWGN--LNPAQVVAAV-------GFKCKRLEIPRNLNPQVA 269
Query: 620 EVAIACNSASPEQRPTMWQVLKMLQE-IKGAV 650
+ C + P +RP+ ++ +L+ IK AV
Sbjct: 270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 91
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 92 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 144
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 145 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 203
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 204 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 254
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 255 SRLLKHN---PSQRPMLREVLE 273
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 18/249 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + +RH LV L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 83 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 137
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 196
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 627 SASPEQRPT 635
PE+RPT
Sbjct: 253 RKDPEERPT 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 100
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 153
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +AD+ + S + L Y PE K
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 212
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 213 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 263
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 264 SRLLKHN---PSQRPMLREVLE 282
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 332 -SEEPIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 386
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 445
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 446 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMP--CPPECPESLHDLMCQCW 501
Query: 627 SASPEQRPTMWQVLKMLQE 645
PE+RPT + L++
Sbjct: 502 RKEPEERPTFEYLQAFLED 520
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + ++ +A G++Y+ + VH
Sbjct: 80 -SEEPIYIVTEYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIASGMAYVERM-NYVH 134
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEA-ALYGRFTIKS 193
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 194 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 249
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 250 RKEPEERPTF 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + +A +A G++Y+ + VH
Sbjct: 83 -SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 137
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L ++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 196
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 627 SASPEQRPT 635
PE+RPT
Sbjct: 253 RKDPEERPT 261
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 18/250 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y GSL + G K L + ++ +A G++Y+ + VH
Sbjct: 80 -SEEPIYIVTEYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIASGMAYVERM-NYVH 134
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 193
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 194 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 249
Query: 627 SASPEQRPTM 636
PE+RPT
Sbjct: 250 RKEPEERPTF 259
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 12/204 (5%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 78
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
YF LI +Y P G+++ + K +R + + ++A LSY H R
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYIT---ELANALSYCHSK-R 132
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKS 568
++H ++K N+LLG + E +AD+ + S + L Y PE K
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKV 191
Query: 569 DVYSFGVLLLELLTGKPPSQ-HSF 591
D++S GVL E L G PP + H++
Sbjct: 192 DLWSLGVLCYEFLVGMPPFEAHTY 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y G L + G K L + +A +A G++Y+ + VH
Sbjct: 83 -SEEPIYIVMEYMSKGCLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 137
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 196
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 627 SASPEQRPT 635
PE+RPT
Sbjct: 253 RKDPEERPT 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG+G G + + V +K L + S E + Q + + LRH LV L A
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
++E ++ +Y G L + G K L + +A +A G++Y+ + VH
Sbjct: 83 -SEEPIYIVTEYMSKGCLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERM-NYVH 137
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+G + +AD+ L L D + + + + APE + T KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKS 196
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV-RSAREDDGAEDERLGMLLEVAIACN 626
DV+SFG+LL EL T G+ P + +V E+++ V R R E L ++ C
Sbjct: 197 DVWSFGILLTELTTKGRVP--YPGMVNREVLDQVERGYRMPCPPECPE--SLHDLMCQCW 252
Query: 627 SASPEQRPT 635
PE+RPT
Sbjct: 253 RKDPEERPT 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 77
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 130
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +A++ + S + L Y PE K
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 189
Query: 568 SDVYSFGVLLLELLTGKPPSQ-HSFLVPNEMMNWVRSARED---DGAEDERLGMLLEVAI 623
D++S GVL E L GKPP + +++ + ++ V D +GA D L+ +
Sbjct: 190 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD-----LISRLL 244
Query: 624 ACNSASPEQRPTMWQVLK 641
N P QRP + +VL+
Sbjct: 245 KHN---PSQRPMLREVLE 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 33/262 (12%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A ++ I+ +K L ++L AG +++ + +E LRHPN++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL-RREVEIQSHLRHPNILRLY 76
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF LI +Y P G+++ + SK + + + ++A LSY H
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK- 129
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
R++H ++K N+LLG E +A++ + S + L Y PE K
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEK 188
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED--------DGAEDERLGMLL 619
D++S GVL E L GKPP F + R +R + +GA D L+
Sbjct: 189 VDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGARD-----LI 239
Query: 620 EVAIACNSASPEQRPTMWQVLK 641
+ N P QRP + +VL+
Sbjct: 240 SRLLKHN---PSQRPMLREVLE 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 72 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 126
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H NL+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG-TFTI 185
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 240
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 241 LCWKERPEDRPTF 253
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 20/262 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + A + V VK + K S E + + L+H LV L A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
KE +I ++ GSL + + ++ +PL + + +A+G+++I Q +H
Sbjct: 80 -TKEPIYIITEFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAEGMAFIEQR-NYIH 134
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+ +AD+ L + D + ++ + + APE N T KS
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG-SFTIKS 193
Query: 569 DVYSFGVLLLELLT-GK--PPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625
DV+SFG+LL+E++T G+ P + V + R R ++ E+ L + + C
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEE-----LYNIMMRC 248
Query: 626 NSASPEQRPTMWQVLKMLQEIK 647
PE+RPT + +L + +
Sbjct: 249 WKNRPEERPTFEYIQSVLDDFE 270
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 20/272 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + A + V VK + K S E + + L+H LV L A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
KE +I ++ GSL + + ++ +PL + + +A+G+++I Q +H
Sbjct: 253 -TKEPIYIITEFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAEGMAFIEQR-NYIH 307
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++N+L+ +AD+ L + D + ++ + + APE N T KS
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG-SFTIKS 366
Query: 569 DVYSFGVLLLELLT-GK--PPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625
DV+SFG+LL+E++T G+ P + V + R R ++ E+ L + + C
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEE-----LYNIMMRC 421
Query: 626 NSASPEQRPTMWQVLKMLQEIKGAVLMEDGEL 657
PE+RPT + +L + A + E+
Sbjct: 422 WKNRPEERPTFEYIQSVLDDFYTATESQXEEI 453
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 23/276 (8%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 84
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 85 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 139
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG-TFTI 198
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 253
Query: 624 ACNSASPEQRPTMWQVLKMLQEIKGAVLMEDGELDP 659
C PE RPT + +L++ A +G+ P
Sbjct: 254 LCWKERPEDRPTFDYLRSVLEDFFTAT---EGQFQP 286
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 70
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 71 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 125
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG-TFTI 184
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 239
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 240 LCWKERPEDRPTF 252
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 130
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG-TFTI 189
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 244
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 245 LCWKERPEDRPTF 257
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 76
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 77 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 131
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG-TFTI 190
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 191 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 245
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 246 LCWKERPEDRPTF 258
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 130
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG-TFTI 189
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 244
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 245 LCWKERPEDRPTF 257
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 77
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 78 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 132
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG-TFTI 191
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 192 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 246
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 247 LCWKERPEDRPTF 259
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
E +GKGS G +K + DNR +V +K +D + E +Q + + P +
Sbjct: 33 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKY 90
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ + +I +Y GS L+ PL T I ++ +GL Y+H
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSE- 143
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDDDPDNLLYKAPETRNASHQAT 565
+ +H ++K++NVLL E LAD+ + D+ ++ + APE S
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS-AYD 202
Query: 566 SKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625
SK+D++S G+ +EL G+PP HS L P +++ ++ E L E AC
Sbjct: 203 SKADIWSLGITAIELARGEPP--HSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEAC 259
Query: 626 NSASPEQRPTMWQVLK 641
+ P RPT ++LK
Sbjct: 260 LNKEPSFRPTAKELLK 275
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 82 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 136
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG-TFTI 195
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 250
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 251 LCWKERPEDRPTF 263
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 24/262 (9%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + A + V VK + K S E + + L+H LV L A
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
KE +I ++ GSL + + ++ +PL + + +A+G+++I Q +H
Sbjct: 247 -TKEPIYIITEFMAKGSLLDFLKSDEGSK-QPL--PKLIDFSAQIAEGMAFIEQR-NYIH 301
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
+L+++N+L+ +AD+ L + A + + APE N T KSDV+
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKF-------PIKWTAPEAINFG-SFTIKSDVW 353
Query: 572 SFGVLLLELLT-GK--PPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSA 628
SFG+LL+E++T G+ P + V + R R ++ E+ L + + C
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEE-----LYNIMMRCWKN 408
Query: 629 SPEQRPTMWQVLKMLQEIKGAV 650
PE+RPT + +L + A
Sbjct: 409 RPEERPTFEYIQSVLDDFYTAT 430
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 130
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG-TFTI 189
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 244
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 245 LCWKERPEDRPTF 257
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 83
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 84 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 138
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG-TFTI 197
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 252
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 253 LCWKERPEDRPTF 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 82 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 136
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG-TFTI 195
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 250
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 251 LCWKERPEDRPTF 263
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 80
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 81 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 135
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG-TFTI 194
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 249
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 250 LCWKERPEDRPTF 262
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 85
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 86 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 140
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG-TFTI 199
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 254
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 255 LCWKERPEDRPTF 267
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
E +GKGS G +K + DNR +V +K +D + E +Q + + P +
Sbjct: 13 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKY 70
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ + +I +Y GS L+ PL T I ++ +GL Y+H
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSE- 123
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDDDPDNLLYKAPETRNASHQAT 565
+ +H ++K++NVLL E LAD+ + D+ ++ + APE S
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS-AYD 182
Query: 566 SKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625
SK+D++S G+ +EL G+PP HS L P +++ ++ E L E AC
Sbjct: 183 SKADIWSLGITAIELARGEPP--HSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEAC 239
Query: 626 NSASPEQRPTMWQVLK 641
+ P RPT ++LK
Sbjct: 240 LNKEPSFRPTAKELLK 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
E +GKGS G +K + DNR +V +K +D + E +Q + + P +
Sbjct: 13 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKY 70
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ + +I +Y GS L+ PL T I ++ +GL Y+H
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSE- 123
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDDDPDNLLYKAPETRNASHQAT 565
+ +H ++K++NVLL E LAD+ + D+ ++ + APE S
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AYD 182
Query: 566 SKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625
SK+D++S G+ +EL G+PP HS L P +++ ++ E L E AC
Sbjct: 183 SKADIWSLGITAIELARGEPP--HSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEAC 239
Query: 626 NSASPEQRPTMWQVLK 641
+ P RPT ++LK
Sbjct: 240 LNKEPSFRPTAKELLK 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
E +GKGS G +K + DNR +V +K +D + E +Q + + P +
Sbjct: 28 EKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKY 85
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ + +I +Y GS L+ PL T I ++ +GL Y+H
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLHSE- 138
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDDDPDNLLYKAPETRNASHQAT 565
+ +H ++K++NVLL E LAD+ + D+ ++ + APE S
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AYD 197
Query: 566 SKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625
SK+D++S G+ +EL G+PP HS L P +++ ++ E L E AC
Sbjct: 198 SKADIWSLGITAIELARGEPP--HSELHPMKVL-FLIPKNNPPTLEGNYSKPLKEFVEAC 254
Query: 626 NSASPEQRPTMWQVLK 641
+ P RPT ++LK
Sbjct: 255 LNKEPSFRPTAKELLK 270
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E LG G G + + V VK L K S + + + L+H LV L A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+E +I +Y NGSL + K+ L L +A +A+G+++I +
Sbjct: 76 VV-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER-NY 130
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATS 566
+H +L+++N+L+ +AD+ L L D + ++ + + APE N T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYG-TFTI 189
Query: 567 KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW---VRSAREDDGAEDERLGMLLEVAI 623
KSDV+SFG+LL E++T P + N R R D+ E+ L ++
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEE-----LYQLMR 244
Query: 624 ACNSASPEQRPTM 636
C PE RPT
Sbjct: 245 LCWKERPEDRPTF 257
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 35/282 (12%)
Query: 378 LYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVG 437
L+ +D E++G+G+ G KA + V +K++++ + + + + +
Sbjct: 3 LHMIDYKEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESE----SERKAFIVELRQLS 57
Query: 438 GLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKS----TRAKPLHWTSCLKIA 493
+ HPN+V L Y L+ +Y GSL++++HG++ T A + W CL+
Sbjct: 58 RVNHPNIVKL--YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQ-- 111
Query: 494 EDVAQGLSYIH--QAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSLQDDDPD 548
+QG++Y+H Q L+H +LK N+LL G + C D+ TA + ++
Sbjct: 112 --CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC--DFG-TACDIQTHMTNNKG 166
Query: 549 NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQH----SFLVPNEMMNWVRSA 604
+ + APE S+ + K DV+S+G++L E++T + P +F + + N R
Sbjct: 167 SAAWMAPEVFEGSNY-SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 605 REDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
+ + + + C S P QRP+M +++K++ +
Sbjct: 226 LIKNLPKP-----IESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 17 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H S++ + IA A+G+ Y+H A
Sbjct: 75 GY-STKPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLH-AKS 128
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDD-PDNLLYKAPET--RNASH 562
++H +LKS+N+ L D + D+ L + + S Q + ++L+ APE S+
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 563 QATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR---HPNLVPLR 448
+G GS GT YK V VK L K+ + E ++ V LR H N++
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKIL---KVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K+ ++ + SL+ +H + + IA AQG+ Y+H A
Sbjct: 99 GYM-TKDNLAIVTQWCEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLH-AKN 152
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDDPD-NLLYKAPET-RNASHQ 563
++H ++KS+N+ L + D+ L + + S Q + P ++L+ APE R +
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 564 ATS-KSDVYSFGVLLLELLTGKPPSQH 589
S +SDVYS+G++L EL+TG+ P H
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELPYSH 239
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 35/282 (12%)
Query: 378 LYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVG 437
L+ +D E++G+G+ G KA + V +K++++ + + + + +
Sbjct: 2 LHMIDYKEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESE----SERKAFIVELRQLS 56
Query: 438 GLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKS----TRAKPLHWTSCLKIA 493
+ HPN+V L Y L+ +Y GSL++++HG++ T A + W CL+
Sbjct: 57 RVNHPNIVKL--YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQ-- 110
Query: 494 EDVAQGLSYIH--QAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSLQDDDPD 548
+QG++Y+H Q L+H +LK N+LL G + C D+ TA + ++
Sbjct: 111 --CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC--DFG-TACDIQTHMTNNKG 165
Query: 549 NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQH----SFLVPNEMMNWVRSA 604
+ + APE S+ + K DV+S+G++L E++T + P +F + + N R
Sbjct: 166 SAAWMAPEVFEGSNY-SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 605 REDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
+ + + + C S P QRP+M +++K++ +
Sbjct: 225 LIKNLPKP-----IESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E++G G G Y+A + + + V R D + + E Q + L+HPN++ LR
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW- 507
+ L+ ++ G L ++ G + ++W A +A+G++Y+H
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAI 126
Query: 508 -RLVHGNLKSSNVLLGPDFEAC--------LADYCLTALTADSLQDDDPDNLLYKAPETR 558
++H +LKSSN+L+ E + D+ L + + + APE
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
AS + SDV+S+GVLL ELLTG+ P
Sbjct: 187 RAS-MFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 71 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 124
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDD-PDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + S Q + ++L+ APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H S++ + IA A+G+ Y+H A
Sbjct: 87 GY-STKPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLH-AKS 140
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCL----TALTADSLQDDDPDNLLYKAPET--RNASH 562
++H +LKS+N+ L D + D+ L + + + ++L+ APE S+
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 563 QATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 15 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 73 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 126
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDD-PDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + S Q + ++L+ APE +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 76 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 129
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDD-PDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + S Q + ++L+ APE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 76 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 129
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDD-PDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + S Q + ++L+ APE +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA--GTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A N+ I+ +K L S+L G +++ + +E LRHPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL-RREIEIQSHLRHPNILRMY 80
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
YF ++ L+ ++ P G L+ + HG + E++A L Y H+
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ-------RSATFMEELADALHYCHER 133
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPE-TRNASHQAT 565
+++H ++K N+L+G E +AD+ + + L Y PE +H
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD-- 190
Query: 566 SKSDVYSFGVLLLELLTGKPP 586
K D++ GVL E L G PP
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPP 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA--GTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A N+ I+ +K L S+L G +++ + +E LRHPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL-RREIEIQSHLRHPNILRMY 81
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
YF ++ L+ ++ P G L+ + HG + E++A L Y H+
Sbjct: 82 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ-------RSATFMEELADALHYCHER 134
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPE-TRNASHQAT 565
+++H ++K N+L+G E +AD+ + + L Y PE +H
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD-- 191
Query: 566 SKSDVYSFGVLLLELLTGKPP 586
K D++ GVL E L G PP
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA--GTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A N+ I+ +K L S+L G +++ + +E LRHPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL-RREIEIQSHLRHPNILRMY 80
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
YF ++ L+ ++ P G L+ + HG + E++A L Y H+
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ-------RSATFMEELADALHYCHER 133
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPE-TRNASHQAT 565
+++H ++K N+L+G E +AD+ + + L Y PE +H
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHD-- 190
Query: 566 SKSDVYSFGVLLLELLTGKPP 586
K D++ GVL E L G PP
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPP 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 40 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 98 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 151
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDD-PDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + S Q + ++L+ APE +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 19/251 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + +N V VK L K S + + + + L+H LV L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+E +I +Y GSL + KS + + + +A+G++YI + +H
Sbjct: 78 TREEPIYIITEYMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIH 133
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++NVL+ +AD+ L + D + ++ + + APE N T KS
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC-FTIKS 192
Query: 569 DVYSFGVLLLELLT-GK--PPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625
DV+SFG+LL E++T GK P + + V + R R ++ ++ L ++ C
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDE-----LYDIMKMC 247
Query: 626 NSASPEQRPTM 636
E+RPT
Sbjct: 248 WKEKAEERPTF 258
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 99 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 152
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDD-PDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + S Q + ++L+ APE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 49/293 (16%)
Query: 390 ELLGKGSLGTTYKAVLDN---RLIVCVKRLD--ASKLAGTSNEMYEQHMESVGGLR---- 440
+++G+G+ G KA + R+ +KR+ ASK + H + G L
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK---------DDHRDFAGELEVLCK 78
Query: 441 ---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKP-----------LHW 486
HPN++ L + + L +Y P+G+L + S+ P L
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT---ALTADSLQ 543
L A DVA+G+ Y+ Q + +H NL + N+L+G ++ A +AD+ L+ +
Sbjct: 139 QQLLHFAADVARGMDYLSQK-QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 197
Query: 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLEL--LTGKPPSQHSFLVPNEMMNWV 601
P + + A E+ N S T+ SDV+S+GVLL E+ L G P + E +
Sbjct: 198 GRLP--VRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 254
Query: 602 RSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVL----KMLQEIKGAV 650
+ +DE ++ + C P +RP+ Q+L +ML+E K V
Sbjct: 255 YRLEKPLNCDDEVYDLMRQ----CWREKPYERPSFAQILVSLNRMLEERKTYV 303
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 71 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 124
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCL----TALTADSLQDDDPDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + + ++L+ APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y A + ++ + SL+ +H S++ + IA A+G+ Y+H A
Sbjct: 87 GYSTAPQ-LAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLH-AKS 140
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCL----TALTADSLQDDDPDNLLYKAPET--RNASH 562
++H +LKS+N+ L D + D+ L + + + ++L+ APE S+
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 563 QATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y A + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 71 GYSTA-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 124
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA---DSLQDDD-PDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + S Q + ++L+ APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 33 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 91 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 144
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCL----TALTADSLQDDDPDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + + ++L+ APE +
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 44/293 (15%)
Query: 382 DQLMRASAELLGKGSLGTTYKA-VLD---NRLIVCVKRLDASKLAGTSN-EMYEQHMESV 436
++++ S ++GKG G Y +D NR+ +K L S++ E + + +
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLM 76
Query: 437 GGLRHPNLVPLRAYFQAKEE-RLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
GL HPN++ L E ++ Y +G L I +S + P +
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI---RSPQRNPT-VKDLISFGLQ 132
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAP 555
VA+G+ Y+ + + VH +L + N +L F +AD+ L D L D Y
Sbjct: 133 VARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADF---GLARDIL-----DREYYSVQ 183
Query: 556 ETRNA-------------SHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV 601
+ R+A +++ T+KSDV+SFGVLL ELLT G PP +H + P ++ +++
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH--IDPFDLTHFL 241
Query: 602 RSAR---EDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651
R + + D L +V C A P RPT ++ +++I A+L
Sbjct: 242 AQGRRLPQPEYCPDS----LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 76
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 130
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-----LQDDDPDNLLYKAPET 557
+ R +H NL + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 131 LGTK-RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 190 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+ +G GS GT YK V VK L+ + + ++ + + RH N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
Y K + ++ + SL+ +H ++ + IA AQG+ Y+H A
Sbjct: 99 GY-STKPQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLH-AKS 152
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCL----TALTADSLQDDDPDNLLYKAPETRNASHQ- 563
++H +LKS+N+ L D + D+ L + + + ++L+ APE +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 564 -ATSKSDVYSFGVLLLELLTGKPP 586
+ +SDVY+FG++L EL+TG+ P
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS------QICKGMEY 132
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 133 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 192 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 129/293 (44%), Gaps = 49/293 (16%)
Query: 390 ELLGKGSLGTTYKAVLDN---RLIVCVKRLD--ASKLAGTSNEMYEQHMESVGGLR---- 440
+++G+G+ G KA + R+ +KR+ ASK + H + G L
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK---------DDHRDFAGELEVLCK 71
Query: 441 ---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKP-----------LHW 486
HPN++ L + + L +Y P+G+L + S+ P L
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT---ALTADSLQ 543
L A DVA+G+ Y+ Q + +H +L + N+L+G ++ A +AD+ L+ +
Sbjct: 132 QQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 190
Query: 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLEL--LTGKPPSQHSFLVPNEMMNWV 601
P + + A E+ N S T+ SDV+S+GVLL E+ L G P + E +
Sbjct: 191 GRLP--VRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 247
Query: 602 RSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVL----KMLQEIKGAV 650
+ +DE ++ + C P +RP+ Q+L +ML+E K V
Sbjct: 248 YRLEKPLNCDDEVYDLMRQ----CWREKPYERPSFAQILVSLNRMLEERKTYV 296
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 106
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 160
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 161 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 220 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 262
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 93
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 147
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 148 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 207 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 249
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 129/293 (44%), Gaps = 49/293 (16%)
Query: 390 ELLGKGSLGTTYKAVLDN---RLIVCVKRLD--ASKLAGTSNEMYEQHMESVGGLR---- 440
+++G+G+ G KA + R+ +KR+ ASK + H + G L
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK---------DDHRDFAGELEVLCK 81
Query: 441 ---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKP-----------LHW 486
HPN++ L + + L +Y P+G+L + S+ P L
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT---ALTADSLQ 543
L A DVA+G+ Y+ Q + +H +L + N+L+G ++ A +AD+ L+ +
Sbjct: 142 QQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLEL--LTGKPPSQHSFLVPNEMMNWV 601
P + + A E+ N S T+ SDV+S+GVLL E+ L G P + E +
Sbjct: 201 GRLP--VRWMAIESLNYS-VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 257
Query: 602 RSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVL----KMLQEIKGAV 650
+ +DE ++ + C P +RP+ Q+L +ML+E K V
Sbjct: 258 YRLEKPLNCDDEVYDLMRQ----CWREKPYERPSFAQILVSLNRMLEERKTYV 306
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 19/251 (7%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + +N V VK L K S + + + + L+H LV L A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+E +I ++ GSL + KS + + + +A+G++YI + +H
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFL---KSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIH 132
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD---SLQDDDPDNLLYKAPETRNASHQATSKS 568
+L+++NVL+ +AD+ L + D + ++ + + APE N T KS
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC-FTIKS 191
Query: 569 DVYSFGVLLLELLT-GK--PPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIAC 625
+V+SFG+LL E++T GK P + + V + + R R ++ ++ L ++ C
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDE-----LYDIMKMC 246
Query: 626 NSASPEQRPTM 636
E+RPT
Sbjct: 247 WKEKAEERPTF 257
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 74
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 128
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 129 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 188 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 129
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 130 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 189 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 129
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 130 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 189 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 93
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 147
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 148 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 207 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 249
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 73
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 127
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 128 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 187 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 229
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 81
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 135
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 136 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 195 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 237
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 79
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 133
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 134 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 193 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 235
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 129
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-----LQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 130 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 189 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 80
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 134
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 135 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 194 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 236
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 82
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 136
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 137 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 196 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 238
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
+G G G + N+ V +K + + S E + + E + L HP LV L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ L++++ +G L + + A CL DV +G++Y+ +A ++H
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEA-CVIH 124
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---LLYKAPETRNASHQATSKS 568
+L + N L+G + ++D+ +T D + + +PE + S + +SKS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKS 183
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLL-------- 619
DV+SFGVL+ E+ + GK P ++ RS E ED G L
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYEN------------RSNSE--VVEDISTGFRLYKPRLAST 229
Query: 620 ---EVAIACNSASPEQRPTMWQVLKMLQEI 646
++ C PE RP ++L+ L EI
Sbjct: 230 HVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI +Y P GSL + H + K L +TS + +G+ Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS------QICKGMEY 132
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 133 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 192 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 34/268 (12%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
+G G G + N+ V +K + + S E + + E + L HP LV L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ L++++ +G L + + A CL DV +G++Y+ +A ++H
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEA-CVIH 126
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---LLYKAPETRNASHQATSKS 568
+L + N L+G + ++D+ +T D + + +PE + S + +SKS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKS 185
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARE--DDGAEDERL-------GML 618
DV+SFGVL+ E+ + GK P ++ RS E +D + RL +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYEN------------RSNSEVVEDISTGFRLYKPRLASTHV 233
Query: 619 LEVAIACNSASPEQRPTMWQVLKMLQEI 646
++ C PE RP ++L+ L EI
Sbjct: 234 YQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 118/268 (44%), Gaps = 34/268 (12%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
+G G G + N+ V +K + + S E + + E + L HP LV L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ L++++ +G L + + A CL DV +G++Y+ +A ++H
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEA-CVIH 129
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---LLYKAPETRNASHQATSKS 568
+L + N L+G + ++D+ +T D + + +PE + S + +SKS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKS 188
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARE--DDGAEDERL-------GML 618
DV+SFGVL+ E+ + GK P ++ RS E +D + RL +
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYEN------------RSNSEVVEDISTGFRLYKPRLASTHV 236
Query: 619 LEVAIACNSASPEQRPTMWQVLKMLQEI 646
++ C PE RP ++L+ L EI
Sbjct: 237 YQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
+G G G + N+ V +K + K S + + + E + L HP LV L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI---KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ L++++ +G L + + A CL DV +G++Y+ +A ++H
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEAC-VIH 146
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---LLYKAPETRNASHQATSKS 568
+L + N L+G + ++D+ +T D + + +PE + S + +SKS
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKS 205
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLL-------- 619
DV+SFGVL+ E+ + GK P ++ RS E ED G L
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYEN------------RSNSE--VVEDISTGFRLYKPRLAST 251
Query: 620 ---EVAIACNSASPEQRPTMWQVLKMLQEI 646
++ C PE RP ++L+ L EI
Sbjct: 252 HVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 29/260 (11%)
Query: 392 LGKGSLGTTYKAVLDN--RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
+GKGS G YK + DN + +V +K +D + ++ +Q + + P +
Sbjct: 27 IGKGSFGEVYKGI-DNHTKEVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYITRYFG 84
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+ + +I +Y GS L+ + PL T I ++ +GL Y+H R
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL------KPGPLEETYIATILREILKGLDYLHSE-RK 137
Query: 510 VHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDDDPDNLLYKAPETRNASHQATSK 567
+H ++K++NVLL + LAD+ + D+ ++ + APE S K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AYDFK 196
Query: 568 SDVYSFGVLLLELLTGKPPSQ--HS----FLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621
+D++S G+ +EL G+PP+ H FL+P S +G + +E
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN------SPPTLEGQHSKPFKEFVE- 249
Query: 622 AIACNSASPEQRPTMWQVLK 641
AC + P RPT ++LK
Sbjct: 250 --ACLNKDPRFRPTAKELLK 267
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 39/221 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL-- 447
EL+G+G G YK LD R V VK A N + E+++ V + H N+
Sbjct: 19 ELIGRGRYGAVYKGSLDER-PVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 448 ---RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
R + E LL+ +Y PNGSL + S W S ++A V +GL+Y+H
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAHSVTRGLAYLH 128
Query: 505 QAW--------RLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADSL-QDDDPDN----- 549
+ H +L S NVL+ D ++D+ L+ LT + L + + DN
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 550 ---LLYKAPETRNAS------HQATSKSDVYSFGVLLLELL 581
+ Y APE + A + D+Y+ G++ E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S + +E+ +E + L+H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 447 LRA--YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ Y + LI ++ P GSL + H + K L +TS + +G+ Y
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS------QICKGMEY 132
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-----TADSLQDDDPDNLLYKAPET 557
+ R +H +L + N+L+ + + D+ LT + +++ + + APE+
Sbjct: 133 LGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-----GKPPSQHSFLVPNE 596
S + + SDV+SFGV+L EL T PP++ ++ N+
Sbjct: 192 LTESKFSVA-SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 34/273 (12%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
+G G G + N+ V +K + + S E + + E + L HP LV L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ L++++ +G L + + A CL DV +G++Y+ +A ++H
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEA-SVIH 126
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---LLYKAPETRNASHQATSKS 568
+L + N L+G + ++D+ +T D + + +PE + S + +SKS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKS 185
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARE--DDGAEDERL-------GML 618
DV+SFGVL+ E+ + GK P ++ RS E +D + RL +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYEN------------RSNSEVVEDISTGFRLYKPRLASTHV 233
Query: 619 LEVAIACNSASPEQRPTMWQVLKMLQEIKGAVL 651
++ C PE RP ++L+ L I + L
Sbjct: 234 YQIMNHCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 392 LGKGSLGTTYKA--VLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
+GKG+ A +L R V +K +D ++L TS + + + + L HPN+V L
Sbjct: 20 IGKGNFAKVKLARHILTGRE-VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 450 YFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ ++ LI +Y G +F + HG R K S + + + Y HQ
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHG----RMKEKEARSKFR---QIVSAVQYCHQK- 130
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATS 566
R+VH +LK+ N+LL D +AD+ + T D + Y APE
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 567 KSDVYSFGVLLLELLTGKPP 586
+ DV+S GV+L L++G P
Sbjct: 191 EVDVWSLGVILYTLVSGSLP 210
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 23/228 (10%)
Query: 367 GNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKA--VLDNRLIVCVKRLDASKLAGT 424
GN + A + Q + + ++ + +GKG+ A VL R V VK +D ++L T
Sbjct: 1 GNSITSATDEQPHIGNYRLQKT---IGKGNFAKVKLARHVLTGRE-VAVKIIDKTQLNPT 56
Query: 425 SNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HG---SKST 479
S + + + + L HPN+V L + ++ L+ +Y G +F + HG K
Sbjct: 57 SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 480 RAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALT 538
RAK + + Y HQ + +VH +LK+ N+LL D +AD+ + T
Sbjct: 117 RAK----------FRQIVSAVQYCHQKY-IVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
+ D + Y APE + DV+S GV+L L++G P
Sbjct: 166 VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 28/277 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E+LGKG G K V V + + + + + + ++ + L HPN++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMK-ELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ I +Y G+L +I S W+ + A+D+A G++Y+H +
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP----WSQRVSFAKDIASGMAYLH-SMN 128
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD-------PD---------NLLY 552
++H +L S N L+ + +AD+ L L D + PD N +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 553 KAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE--DDGA 610
APE N K DV+SFG++L E++ G+ + +L M++ + R D
Sbjct: 189 MAPEMING-RSYDEKVDVFSFGIVLCEII-GRVNADPDYL--PRTMDFGLNVRGFLDRYC 244
Query: 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647
+ + C PE+RP+ ++ L+ ++
Sbjct: 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 76
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 134
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 135 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 189
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 76
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 134
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 135 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 189
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 76
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 134
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 135 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 189
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 24 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 77
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 135
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 136 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 190
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 27 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 80
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 138
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 139 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 193
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 76
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 134
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 135 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 189
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 42 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 95
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 153
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 154 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 208
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 26/210 (12%)
Query: 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
+++G GS G Y+A L D+ +V +K++ L G + + E ++ + L H N+V L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRE--LQIMRKLDHCNIVRL 78
Query: 448 RAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
R +F + E+ L+ DY P H S++ + P+ + + + L+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLA 136
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAP 555
YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+AP
Sbjct: 137 YIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRAP 191
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKP 585
E + TS DV+S G +L ELL G+P
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 35 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 88
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 146
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 147 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 201
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V LR
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLR 84
Query: 449 AYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+F + E+ L+ DY P H S++ + P+ + + + L+Y
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLAY 142
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAPE 556
IH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+APE
Sbjct: 143 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRAPE 197
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ TS DV+S G +L ELL G+P
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQP 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
+G G G + N+ V +K + + S E + + E + L HP LV L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ L+ ++ +G L + + A CL DV +G++Y+ +A ++H
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL----DVCEGMAYLEEA-CVIH 127
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---LLYKAPETRNASHQATSKS 568
+L + N L+G + ++D+ +T D + + +PE + S + +SKS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS-RYSSKS 186
Query: 569 DVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLL-------- 619
DV+SFGVL+ E+ + GK P ++ RS E ED G L
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYEN------------RSNSE--VVEDISTGFRLYKPRLAST 232
Query: 620 ---EVAIACNSASPEQRPTMWQVLKMLQEI 646
++ C PE RP ++L+ L EI
Sbjct: 233 HVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 31 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 84
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 142
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 143 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYR 197
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ L G + + E ++ + L H N+V
Sbjct: 23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRE--LQIMRKLDHCNIV 76
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 134
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 135 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 189
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 376 AQLYTLDQLMRASAEL--LGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQH 432
A+L+ D + ++L +G GS G Y A + N +V +K++ S SNE ++
Sbjct: 44 AELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS--GKQSNEKWQDI 101
Query: 433 MESV---GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ V LRHPN + R + + L+ +Y GS L+ K KPL
Sbjct: 102 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK----KPLQEVEI 156
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
+ QGL+Y+H + ++H ++K+ N+LL L D+ ++ A P N
Sbjct: 157 AAVTHGALQGLAYLH-SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-------PAN 208
Query: 550 LL-----YKAPETRNA--SHQATSKSDVYSFGVLLLELLTGKPP 586
+ APE A Q K DV+S G+ +EL KPP
Sbjct: 209 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V LR
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLR 91
Query: 449 AYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+F + E+ L+ DY P H S++ + P+ + + + L+Y
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLAY 149
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAPE 556
IH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+APE
Sbjct: 150 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYRAPE 204
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ TS DV+S G +L ELL G+P
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQP 233
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 105 DQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNN 163
+ L+ L LQNN TG IP LS L SL L N+ +G+ P SL SL +L+ L L N
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 450
Query: 164 LSGPLPKELASQGRLYSLRLDVNRFNGSIPP--LNQSSLKIFNVSGNNFTGAI 214
L G +P+EL L +L LD N G IP N ++L ++S N TG I
Sbjct: 451 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 503
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 98 PNSLTKLD-QLRVLGLQNNSLTGPI-PDL--SGLVNLKSLFLDHNFFTGSFPPSLLSLHR 153
P SLT L L L L +N+ +GPI P+L + L+ L+L +N FTG PP+L +
Sbjct: 357 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 416
Query: 154 LKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP--LNQSSLKIFNVSGNNFT 211
L +L LS+N LSG +P L S +L L+L +N G IP + +L+ + N+ T
Sbjct: 417 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 476
Query: 212 GAI 214
G I
Sbjct: 477 GEI 479
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 98 PNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKT 156
P L + L L L N LTG IP LS NL + L +N TG P + L L
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 515
Query: 157 LDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIP 193
L LS N+ SG +P EL L L L+ N FNG+IP
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 98 PNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKT 156
P +L+ +L L L N L+G IP L L L+ L L N G P L+ + L+T
Sbjct: 408 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 157 LDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAI 214
L L +N+L+G +P L++ L + L NR G IP +L I +S N+F+G I
Sbjct: 468 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 527
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLD---HNFFTGSFPPSLLSLHRLKTLDLSYN 162
+L+ L + N ++G + D+S VNL+ FLD +NF TG P L L+ LD+S N
Sbjct: 176 ELKHLAISGNKISGDV-DVSRCVNLE--FLDVSSNNFSTGI--PFLGDCSALQHLDISGN 230
Query: 163 NLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAI 214
LSG + +++ L L + N+F G IPPL SL+ +++ N FTG I
Sbjct: 231 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEI 282
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 106 QLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNL 164
+ L + N L+G IP ++ + L L L HN +GS P + L L LDLS N L
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 689
Query: 165 SGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFG 224
G +P+ +++ L + L N +G IP + Q F
Sbjct: 690 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ----------------------FETFP 727
Query: 225 ISSFLFNPSLCGEIIHKECNP 245
+ FL NP LCG + + C+P
Sbjct: 728 PAKFLNNPGLCGYPLPR-CDP 747
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 104 LDQLRVLGLQNNSLTGPIPD-LSGLVN-LKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSY 161
L L+ L L N TG IPD LSG + L L L N F G+ PP S L++L LS
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 162 NNLSGPLPKELASQGR-LYSLRLDVNRFNGSIPP--LNQS-SLKIFNVSGNNFTGAI 214
NN SG LP + + R L L L N F+G +P N S SL ++S NNF+G I
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 78 YQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSG-LVNLKSLFLD 136
Y + + ++L DL G P+ L+ L + L NN LTG IP G L NL L L
Sbjct: 461 YVKTLETLILDFNDLTGEI-PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 519
Query: 137 HNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQ 175
+N F+G+ P L L LDL+ N +G +P + Q
Sbjct: 520 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 558
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 107 LRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLS 165
L+ L + N L+G +S LK L + N F G PP L L L+ L L+ N +
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFT 279
Query: 166 GPLPKELASQ-GRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSR 222
G +P L+ L L L N F G++PP + S L+ +S NNF+G + + + L
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 223 FGI 225
G+
Sbjct: 340 RGL 342
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 154 LKTLDLSYNNLSGPLPKELASQGRLYSLR-LDVNR----FNGSIP-PLNQSSLKIFNVSG 207
L +LDLS N+LSGP+ L S G L+ L+V+ F G + L +SL++ ++S
Sbjct: 99 LTSLDLSRNSLSGPV-TTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 157
Query: 208 NNFTGAITVTSTLSRFGISSFLFNPSLCGEIIH 240
N+ +GA V LS CGE+ H
Sbjct: 158 NSISGANVVGWVLSDG-----------CGELKH 179
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 387 ASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V
Sbjct: 36 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIV 89
Query: 446 PLRAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
LR +F + E+ L+ DY P H S++ + P+ + + +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRS 147
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYK 553
L+YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+
Sbjct: 148 LAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYR 202
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKP 585
APE + TS DV+S G +L ELL G+P
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQP 234
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 28/224 (12%)
Query: 376 AQLYTLDQLMRASAEL--LGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQH 432
A+L+ D + ++L +G GS G Y A + N +V +K++ S SNE ++
Sbjct: 5 AELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS--GKQSNEKWQDI 62
Query: 433 MESV---GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ V LRHPN + R + + L+ +Y GS L+ K KPL
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHK----KPLQEVEI 117
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
+ QGL+Y+H ++H ++K+ N+LL L D+ ++ A P N
Sbjct: 118 AAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-------PAN 169
Query: 550 LL-----YKAPETRNA--SHQATSKSDVYSFGVLLLELLTGKPP 586
+ APE A Q K DV+S G+ +EL KPP
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 32/211 (15%)
Query: 391 LLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA-----------GTSNEMYEQHMESVGGL 439
+LGKGS G +I+C ++ + A T E + ++ + L
Sbjct: 39 VLGKGSFG---------EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
HPN++ L +F+ K L+ + G LF I K +I V G
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSG 144
Query: 500 LSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCL-TALTADSLQDDDPDNLLYKAP 555
++Y+H+ ++VH +LK N+LL D + D+ L T A D Y AP
Sbjct: 145 ITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 203
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E + ++ K DV+S GV+L LL+G PP
Sbjct: 204 EVLHGTYD--EKCDVWSTGVILYILLSGCPP 232
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 34/284 (11%)
Query: 392 LGKGSLGTTYKAVLDNRL------IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+G+G+ G ++A L +V VK L A + +++ + +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-FQREAALMAEFDNPNIV 113
Query: 446 PLRAYFQAKEERLLIYDYQPNGSL------------FSLIHGSKSTRAK-------PLHW 486
L + L+++Y G L SL H STRA+ PL
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT--ALTADSLQD 544
L IA VA G++Y+ + + VH +L + N L+G + +AD+ L+ +AD +
Sbjct: 174 AEQLCIARQVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 232
Query: 545 DDPDNLLYK-APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
D D + + P ++ T++SDV+++GV+L E+ + G P + + E++ +VR
Sbjct: 233 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP--YYGMAHEEVIYYVR 290
Query: 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
E+ L L + C S P RP+ + ++LQ +
Sbjct: 291 DGNILACPENCPLE-LYNLMRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V LR
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLR 113
Query: 449 AYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+F + E+ L+ DY P H S++ + P+ + + + L+Y
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLAY 171
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAPE 556
IH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+APE
Sbjct: 172 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYRAPE 226
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ TS DV+S G +L ELL G+P
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA--GTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG G Y A + IV +K L S++ G +++ + +E L HPN++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQL-RREIEIQAHLHHPNILRLY 89
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
YF + LI +Y P G L+ + S + + I E++A L Y H +
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQ-----RTATIMEELADALMYCHGK-K 143
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKS 568
++H ++K N+LLG E +AD+ + + A SL+ L P K
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 569 DVYSFGVLLLELLTGKPP 586
D++ GVL ELL G PP
Sbjct: 203 DLWCIGVLCYELLVGNPP 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 392 LGKGSLGTTYKA--VLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
+GKG+ A +L R V +K +D ++L TS + + + + L HPN+V L
Sbjct: 23 IGKGNFAKVKLARHILTGRE-VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 450 YFQAKEERLLIYDYQPNGSLFSLI--HG---SKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
+ ++ LI +Y G +F + HG K R+K + + Y H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK----------FRQIVSAVQYCH 131
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQ 563
Q R+VH +LK+ N+LL D +AD+ + T D Y APE
Sbjct: 132 QK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
+ DV+S GV+L L++G P
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V LR
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLR 113
Query: 449 AYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+F + E+ L+ DY P H S++ + P+ + + + L+Y
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLAY 171
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAPE 556
IH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+APE
Sbjct: 172 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRAPE 226
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ TS DV+S G +L ELL G+P
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQP 255
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+AQL L + ++LG G+ GT YK + ++ V +K L+ + + E
Sbjct: 29 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM 88
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + + HP+LV L + + L+ P+G L +H K L C
Sbjct: 89 DEAL-IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC 146
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++I A+G+ Y+ + RLVH +L + NVL+ + D+ L L ++ + D
Sbjct: 147 VQI----AKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP 585
+ + A E R +HQ SDV+S+GV + EL+T GKP
Sbjct: 202 GKMPIKWMALECIHYRKFTHQ----SDVWSYGVTIWELMTFGGKP 242
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V LR
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLR 107
Query: 449 AYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+F + E+ L+ DY P H S++ + P+ + + + L+Y
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLAY 165
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAPE 556
IH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+APE
Sbjct: 166 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRAPE 220
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ TS DV+S G +L ELL G+P
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQP 249
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 105 DQLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNN 163
+ L+ L LQNN TG IP LS L SL L N+ +G+ P SL SL +L+ L L N
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453
Query: 164 LSGPLPKELASQGRLYSLRLDVNRFNGSIPP--LNQSSLKIFNVSGNNFTGAI 214
L G +P+EL L +L LD N G IP N ++L ++S N TG I
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 98 PNSLTKLD-QLRVLGLQNNSLTGPI-PDL--SGLVNLKSLFLDHNFFTGSFPPSLLSLHR 153
P SLT L L L L +N+ +GPI P+L + L+ L+L +N FTG PP+L +
Sbjct: 360 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 419
Query: 154 LKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPP--LNQSSLKIFNVSGNNFT 211
L +L LS+N LSG +P L S +L L+L +N G IP + +L+ + N+ T
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479
Query: 212 GAI 214
G I
Sbjct: 480 GEI 482
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 98 PNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKT 156
P L + L L L N LTG IP LS NL + L +N TG P + L L
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 157 LDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIP 193
L LS N+ SG +P EL L L L+ N FNG+IP
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 98 PNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKT 156
P +L+ +L L L N L+G IP L L L+ L L N G P L+ + L+T
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 157 LDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAI 214
L L +N+L+G +P L++ L + L NR G IP +L I +S N+F+G I
Sbjct: 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLD---HNFFTGSFPPSLLSLHRLKTLDLSYN 162
+L+ L + N ++G + D+S VNL+ FLD +NF TG P L L+ LD+S N
Sbjct: 179 ELKHLAISGNKISGDV-DVSRCVNLE--FLDVSSNNFSTGI--PFLGDCSALQHLDISGN 233
Query: 163 NLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAI 214
LSG + +++ L L + N+F G IPPL SL+ +++ N FTG I
Sbjct: 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEI 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 106 QLRVLGLQNNSLTGPIP-DLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNL 164
+ L + N L+G IP ++ + L L L HN +GS P + L L LDLS N L
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692
Query: 165 SGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAITVTSTLSRFG 224
G +P+ +++ L + L N +G IP + Q F
Sbjct: 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ----------------------FETFP 730
Query: 225 ISSFLFNPSLCGEIIHKECNP 245
+ FL NP LCG + + C+P
Sbjct: 731 PAKFLNNPGLCGYPLPR-CDP 750
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 104 LDQLRVLGLQNNSLTGPIPD-LSGLVN-LKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSY 161
L L+ L L N TG IPD LSG + L L L N F G+ PP S L++L LS
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 162 NNLSGPLPKELASQGR-LYSLRLDVNRFNGSIPP--LNQS-SLKIFNVSGNNFTGAI 214
NN SG LP + + R L L L N F+G +P N S SL ++S NNF+G I
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 78 YQQKVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSG-LVNLKSLFLD 136
Y + + ++L DL G P+ L+ L + L NN LTG IP G L NL L L
Sbjct: 464 YVKTLETLILDFNDLTGEI-PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522
Query: 137 HNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQ 175
+N F+G+ P L L LDL+ N +G +P + Q
Sbjct: 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 107 LRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLS 165
L+ L + N L+G +S LK L + N F G PP L L L+ L L+ N +
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFT 282
Query: 166 GPLPKELASQ-GRLYSLRLDVNRFNGSIPPL--NQSSLKIFNVSGNNFTGAITVTSTLSR 222
G +P L+ L L L N F G++PP + S L+ +S NNF+G + + + L
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 223 FGI 225
G+
Sbjct: 343 RGL 345
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 154 LKTLDLSYNNLSGPLPKELASQGRLYSLR-LDVNR----FNGSIP-PLNQSSLKIFNVSG 207
L +LDLS N+LSGP+ L S G L+ L+V+ F G + L +SL++ ++S
Sbjct: 102 LTSLDLSRNSLSGPV-TTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160
Query: 208 NNFTGAITVTSTLSRFGISSFLFNPSLCGEIIH 240
N+ +GA V LS CGE+ H
Sbjct: 161 NSISGANVVGWVLSDG-----------CGELKH 182
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V LR
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLR 158
Query: 449 AYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+F + E+ L+ DY P H S++ + P+ + + + L+Y
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLAY 216
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAPE 556
IH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+APE
Sbjct: 217 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRAPE 271
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ TS DV+S G +L ELL G+P
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQP 300
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
E +GKGS G +K + DNR +V +K +D + E +Q + + +
Sbjct: 29 ERIGKGSFGEVFKGI-DNRTQQVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSSYVTKY 86
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ + +I +Y GS L+ RA P + +++ +GL Y+H
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGSALDLL------RAGPFDEFQIATMLKEILKGLDYLHSE- 139
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADS--LQDDDPDNLLYKAPETRNASHQAT 565
+ +H ++K++NVLL + LAD+ + D+ ++ + APE S
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS-AYD 198
Query: 566 SKSDVYSFGVLLLELLTGKPPSQHS------FLVPNE-----MMNWVRSAREDDGAEDER 614
SK+D++S G+ +EL G+PP+ FL+P + ++ +S +
Sbjct: 199 SKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFK--------- 249
Query: 615 LGMLLEVAIACNSASPEQRPTMWQVLK 641
E AC + P RPT ++LK
Sbjct: 250 -----EFIDACLNKDPSFRPTAKELLK 271
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 26/210 (12%)
Query: 389 AELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
+++G GS G Y+A L D+ +V +K++ L G + + E ++ + L H N+V L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRE--LQIMRKLDHCNIVRL 78
Query: 448 RAYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
R +F + E+ L+ DY P H S++ + P+ + + + L+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLA 136
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAP 555
YIH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+AP
Sbjct: 137 YIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSXICSRYYRAP 191
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKP 585
E + TS DV+S G +L ELL G+P
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V LR
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLR 115
Query: 449 AYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+F + E+ L+ DY P H S++ + P+ + + + L+Y
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLAY 173
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAPE 556
IH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+APE
Sbjct: 174 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRAPE 228
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ TS DV+S G +L ELL G+P
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQP 257
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 32/211 (15%)
Query: 391 LLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA-----------GTSNEMYEQHMESVGGL 439
+LGKGS G +I+C ++ + A T E + ++ + L
Sbjct: 33 VLGKGSFG---------EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
HPN++ L +F+ K L+ + G LF I K +I V G
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSG 138
Query: 500 LSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCL-TALTADSLQDDDPDNLLYKAP 555
++Y+H+ ++VH +LK N+LL D + D+ L T A D Y AP
Sbjct: 139 ITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 197
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E + ++ K DV+S GV+L LL+G PP
Sbjct: 198 EVLHGTYD--EKCDVWSTGVILYILLSGCPP 226
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+AQL L + ++LG G+ GT YK + ++ V +K L+ + + E
Sbjct: 6 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFM 65
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + + HP+LV L + + L+ P+G L +H K L C
Sbjct: 66 DEAL-IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC 123
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++I A+G+ Y+ + RLVH +L + NVL+ + D+ L L ++ + D
Sbjct: 124 VQI----AKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 178
Query: 550 -------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT--GKP 585
+ + R +HQ SDV+S+GV + EL+T GKP
Sbjct: 179 GKMPIKWMALECIHYRKFTHQ----SDVWSYGVTIWELMTFGGKP 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKR--LDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
E +G+G+ G YKA IV +KR LDA S + E + + L HPN+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE--ISLLKELHHPNIVSL 84
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIA-EDVAQGLSYIHQA 506
++ L++++ L ++ +K+ S +KI + +G+++ HQ
Sbjct: 85 IDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQ-----DSQIKIYLYQLLRGVAHCHQH 138
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNASHQA 564
R++H +LK N+L+ D LAD+ L ++ + L Y+AP+ S +
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 565 TSKSDVYSFGVLLLELLTGKP 585
++ D++S G + E++TGKP
Sbjct: 198 STSVDIWSIGCIFAEMITGKP 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 28/266 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + V VK + K S + + Q +++ L HP LV
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMI---KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ ++ +Y NG L + + + K L + L++ DV +G++++ ++ + +H
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYL----RSHGKGLEPSQLLEMCYDVCEGMAFL-ESHQFIH 127
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD-----SLQDDDPDNLLYKAPETRNASHQATS 566
+L + N L+ D ++D+ +T D S+ P + + APE + + +S
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP--VKWSAPEVFHY-FKYSS 184
Query: 567 KSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV----RSAREDDGAEDERLGMLLEV 621
KSDV++FG+L+ E+ + GK P + +E++ V R R ++ + ++
Sbjct: 185 KSDVWAFGILMWEVFSLGKMP--YDLYTNSEVVLKVSQGHRLYRPHLASD-----TIYQI 237
Query: 622 AIACNSASPEQRPTMWQVLKMLQEIK 647
+C PE+RPT Q+L ++ ++
Sbjct: 238 MYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKR--LDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
E +G+G+ G YKA IV +KR LDA S + E + + L HPN+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE--ISLLKELHHPNIVSL 84
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIA-EDVAQGLSYIHQA 506
++ L++++ L ++ +K+ S +KI + +G+++ HQ
Sbjct: 85 IDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQ-----DSQIKIYLYQLLRGVAHCHQH 138
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNASHQA 564
R++H +LK N+L+ D LAD+ L ++ + L Y+AP+ S +
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 565 TSKSDVYSFGVLLLELLTGKP 585
++ D++S G + E++TGKP
Sbjct: 198 STSVDIWSIGCIFAEMITGKP 218
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 32/211 (15%)
Query: 391 LLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA-----------GTSNEMYEQHMESVGGL 439
+LGKGS G +I+C ++ + A T E + ++ + L
Sbjct: 57 VLGKGSFG---------EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
HPN++ L +F+ K L+ + G LF I K +I V G
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSG 162
Query: 500 LSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCL-TALTADSLQDDDPDNLLYKAP 555
++Y+H+ ++VH +LK N+LL D + D+ L T A D Y AP
Sbjct: 163 ITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 221
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E + ++ K DV+S GV+L LL+G PP
Sbjct: 222 EVLHGTYD--EKCDVWSTGVILYILLSGCPP 250
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 32/211 (15%)
Query: 391 LLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA-----------GTSNEMYEQHMESVGGL 439
+LGKGS G +I+C ++ + A T E + ++ + L
Sbjct: 56 VLGKGSFG---------EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
HPN++ L +F+ K L+ + G LF I K +I V G
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSG 161
Query: 500 LSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCL-TALTADSLQDDDPDNLLYKAP 555
++Y+H+ ++VH +LK N+LL D + D+ L T A D Y AP
Sbjct: 162 ITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 220
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E + ++ K DV+S GV+L LL+G PP
Sbjct: 221 EVLHGTYD--EKCDVWSTGVILYILLSGCPP 249
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+++G GS G Y+A L D+ +V +K++ K + ++ + L H N+V LR
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLR 117
Query: 449 AYFQAKEERL------LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+F + E+ L+ DY P H S++ + P+ + + + L+Y
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY--QLFRSLAY 175
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NLLYKAPE 556
IH ++ + H ++K N+LL PD L D+ +A L +P+ + Y+APE
Sbjct: 176 IH-SFGICHRDIKPQNLLLDPDTAVLKLCDFG----SAKQLVRGEPNVSYICSRYYRAPE 230
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ TS DV+S G +L ELL G+P
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQP 259
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 439 LRHPNLVPLRAYF-QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCL-KIAEDV 496
LRH NLV L + K ++ +Y GSL + +R + + CL K + DV
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDV 117
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPE 556
+ + Y+ + VH +L + NVL+ D A ++D+ LT A S QD + + APE
Sbjct: 118 CEAMEYL-EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVKWTAPE 175
Query: 557 T-RNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVP-NEMMNWVRSAREDDGAEDE 613
R A+ ++KSDV+SFG+LL E+ + G+ P +P +++ V + D A D
Sbjct: 176 ALREAAF--STKSDVWSFGILLWEIYSFGRVPYPR---IPLKDVVPRVEKGYKMD-APDG 229
Query: 614 RLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647
+ EV C RP+ Q+ + L+ IK
Sbjct: 230 CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 439 LRHPNLVPLRAYF-QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCL-KIAEDV 496
LRH NLV L + K ++ +Y GSL + +R + + CL K + DV
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDV 126
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPE 556
+ + Y+ + VH +L + NVL+ D A ++D+ LT A S QD + + APE
Sbjct: 127 CEAMEYL-EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVKWTAPE 184
Query: 557 TRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVP-NEMMNWVRSAREDDGAEDER 614
+ ++KSDV+SFG+LL E+ + G+ P +P +++ V + D A D
Sbjct: 185 ALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPR---IPLKDVVPRVEKGYKMD-APDGC 239
Query: 615 LGMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647
+ EV C RP+ Q+ + L+ IK
Sbjct: 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 22/226 (9%)
Query: 374 GEAQLYTLDQLMRASAELLGKGSLGTT--YKAVLDNRLIVCVKRLDASKLAGTSNEMYEQ 431
G LY + +G+GS G K+ D R V +K ++ S+++ E +
Sbjct: 14 GTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYV-IKEINISRMSSKEREESRR 72
Query: 432 HMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKST---RAKPLHWTS 488
+ + ++HPN+V R F+ ++ DY G LF I+ K + L W
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP- 547
+ +A L ++H +++H ++KS N+ L D L D+ + + +++
Sbjct: 133 QICLA------LKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC 185
Query: 548 -DNLLYKAPET-RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSF 591
Y +PE N + +KSD+++ G +L EL T K H+F
Sbjct: 186 IGTPYYLSPEICENKPY--NNKSDIWALGCVLYELCTLK----HAF 225
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 391 LLGKGSLGTTYKA---VLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
+LGKGS G K + V V ++K TS + E +E + L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE--VELLKKLDHPNIMKL 86
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ ++ + G LF I + K +I + V G++Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHKH- 140
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCL-TALTADSLQDDDPDNLLYKAPETRNASHQ 563
+VH +LK N+LL + C + D+ L T ++ D Y APE ++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD 200
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
K DV+S GV+L LL+G PP
Sbjct: 201 --EKCDVWSAGVILYILLSGTPP 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK +D ++L +S + + + + L HPN+V L + ++ L+ +Y G +F
Sbjct: 35 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 94
Query: 471 SLI--HG---SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
+ HG K RAK + + Y HQ + +VH +LK+ N+LL D
Sbjct: 95 DYLVAHGWMKEKEARAK----------FRQIVSAVQYCHQKF-IVHRDLKAENLLLDADM 143
Query: 526 EACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
+AD+ + T + D + Y APE + DV+S GV+L L++G
Sbjct: 144 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 203
Query: 585 PP 586
P
Sbjct: 204 LP 205
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 391 LLGKGSLGTTYKA---VLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
+LGKGS G K + V V ++K TS + E +E + L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE--VELLKKLDHPNIMKL 86
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ ++ + G LF I + K +I + V G++Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHKH- 140
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCL-TALTADSLQDDDPDNLLYKAPETRNASHQ 563
+VH +LK N+LL + C + D+ L T ++ D Y APE ++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD 200
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
K DV+S GV+L LL+G PP
Sbjct: 201 --EKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 391 LLGKGSLGTTYKA---VLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
+LGKGS G K + V V ++K TS + E +E + L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE--VELLKKLDHPNIMKL 86
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ ++ + G LF I + K +I + V G++Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHKH- 140
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCL-TALTADSLQDDDPDNLLYKAPETRNASHQ 563
+VH +LK N+LL + C + D+ L T ++ D Y APE ++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD 200
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
K DV+S GV+L LL+G PP
Sbjct: 201 --EKCDVWSAGVILYILLSGTPP 221
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E+ +G G +KA L N + + L + E+ + S G++H NL+
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVA----VKIFPLQDKQSWQSEREIFSTPGMKHENLL---- 72
Query: 450 YFQAKEER--------LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
F A E+R LI + GSL + G+ T W +AE +++GLS
Sbjct: 73 QFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIIT------WNELCHVAETMSRGLS 126
Query: 502 YIHQ--AW--------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL 551
Y+H+ W + H + KS NVLL D A LAD+ L D +
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV 186
Query: 552 ----YKAPETR----NASHQATSKSDVYSFGVLLLELLT 582
Y APE N A + D+Y+ G++L EL++
Sbjct: 187 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V V+ +D ++L +S + + + + L HPN+V L + ++ L+ +Y G +F
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 471 SLI--HG---SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
+ HG K RAK + + Y HQ + +VH +LK+ N+LL D
Sbjct: 102 DYLVAHGRMKEKEARAK----------FRQIVSAVQYCHQKF-IVHRDLKAENLLLDADM 150
Query: 526 EACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
+AD+ + T + D+ + Y APE + DV+S GV+L L++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 585 PP 586
P
Sbjct: 211 LP 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 439 LRHPNLVPLRAYF-QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCL-KIAEDV 496
LRH NLV L + K ++ +Y GSL + +R + + CL K + DV
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDV 111
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPE 556
+ + Y+ + VH +L + NVL+ D A ++D+ LT A S QD + + APE
Sbjct: 112 CEAMEYL-EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVKWTAPE 169
Query: 557 TRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVP-NEMMNWVRSAREDDGAEDER 614
+ ++KSDV+SFG+LL E+ + G+ P +P +++ V + D A D
Sbjct: 170 ALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPR---IPLKDVVPRVEKGYKMD-APDGC 224
Query: 615 LGMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647
+ EV C RP+ Q+ + L+ IK
Sbjct: 225 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK +D ++L +S + + + + L HPN+V L + ++ L+ +Y G +F
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 471 SLI--HG---SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
+ HG K RAK + + Y HQ + +VH +LK+ N+LL D
Sbjct: 102 DYLVAHGRMKEKEARAK----------FRQIVSAVQYCHQKF-IVHRDLKAENLLLDADM 150
Query: 526 EACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
+AD+ + T + D + Y APE + DV+S GV+L L++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 585 PP 586
P
Sbjct: 211 LP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK +D ++L +S + + + + L HPN+V L + ++ L+ +Y G +F
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 471 SLI--HG---SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
+ HG K RAK + + Y HQ + +VH +LK+ N+LL D
Sbjct: 102 DYLVAHGRMKEKEARAK----------FRQIVSAVQYCHQKF-IVHRDLKAENLLLDADM 150
Query: 526 EACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
+AD+ + T + D + Y APE + DV+S GV+L L++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 585 PP 586
P
Sbjct: 211 LP 212
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 99
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ ++
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 154
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ + VH +L + N +L F +AD+ L D D + K P A
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 270
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 271 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 306
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 9/197 (4%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
+G+GS G +K D IV +K+ S+ ++ + + + L+HPNLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
F+ K L+++Y + L L + R P H I Q +++ H+ +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVK--SITWQTLQAVNFCHKH-NCI 124
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTALTA--DSLQDDDPDNLLYKAPETRNASHQATSKS 568
H ++K N+L+ L D+ L DD+ Y++PE Q
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPV 184
Query: 569 DVYSFGVLLLELLTGKP 585
DV++ G + ELL+G P
Sbjct: 185 DVWAIGCVFAELLSGVP 201
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 95
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ ++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 150
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ + VH +L + N +L F +AD+ L D D + K P A
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 266
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 267 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 302
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 127/294 (43%), Gaps = 57/294 (19%)
Query: 392 LGKGSLGTTYKAVLDN------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
LG+G+ G + A N +++V VK L LA + +++ E + L+H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD--FQREAELLTNLQHEHIV 80
Query: 446 PLRAYFQAKEERLLIYDYQPNGSL-----------FSLIHGSKSTRAKPLHWTSCLKIAE 494
+ +++++Y +G L L+ G L + L IA
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 495 DVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD--------- 545
+A G+ Y+ + VH +L + N L+G + + D+ ++ D D
Sbjct: 141 QIASGMVYL-ASQHFVHRDLATRNCLVGANLLVKIGDF---GMSRDVYSTDYYRVGGHTM 196
Query: 546 ------DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPN-EM 597
P++++Y+ + T++SDV+SFGV+L E+ T GK P F + N E+
Sbjct: 197 LPIRWMPPESIMYR---------KFTTESDVWSFGVILWEIFTYGKQP---WFQLSNTEV 244
Query: 598 MNWVRSAREDDGAEDERL--GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649
+ + R E R+ + +V + C P+QR + ++ K+L + A
Sbjct: 245 IECITQGRV---LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 391 LLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA-----------GTSNEMYEQHMESVGGL 439
+LGKGS G +I+C ++ + A T E + ++ + L
Sbjct: 33 VLGKGSFG---------EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
HPN+ L +F+ K L+ + G LF I K +I V G
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSG 138
Query: 500 LSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCL-TALTADSLQDDDPDNLLYKAP 555
++Y H+ ++VH +LK N+LL D + D+ L T A D Y AP
Sbjct: 139 ITYXHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAP 197
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E + ++ K DV+S GV+L LL+G PP
Sbjct: 198 EVLHGTYD--EKCDVWSTGVILYILLSGCPP 226
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ ++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 149
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ + VH +L + N +L F +AD+ L D D + K P A
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 265
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 266 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 301
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 95
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ ++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 150
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ + VH +L + N +L F +AD+ L D D + K P A
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 266
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 267 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 302
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 153
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ ++
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 208
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ + VH +L + N +L F +AD+ L D D + K P A
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 324
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 325 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V V+ +D ++L +S + + + + L HPN+V L + ++ L+ +Y G +F
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 471 SLI--HG---SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
+ HG K RAK + + Y HQ + +VH +LK+ N+LL D
Sbjct: 102 DYLVAHGRMKEKEARAK----------FRQIVSAVQYCHQKF-IVHRDLKAENLLLDADM 150
Query: 526 EACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
+AD+ + T + D + Y APE + DV+S GV+L L++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 585 PP 586
P
Sbjct: 211 LP 212
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 390 ELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL 444
++LG G GT +K V ++ VC+K ++ K S + HM ++G L H ++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE-DKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
V L +L + Y P GSL + + L L +A+G+ Y+
Sbjct: 78 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQL----LLNWGVQIAKGMYYLE 132
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETR------ 558
+ +VH NL + NVLL + +AD+ + AD L DD LLY +T
Sbjct: 133 EH-GMVHRNLAARNVLLKSPSQVQVADFGV----ADLLPPDD-KQLLYSEAKTPIKWMAL 186
Query: 559 NASH--QATSKSDVYSFGVLLLELLT 582
+ H + T +SDV+S+GV + EL+T
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 92
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ ++
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 147
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ + VH +L + N +L F +AD+ L D D + K P A
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 263
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 264 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ ++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 149
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ + VH +L + N +L F +AD+ L D D + K P A
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 265
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 266 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 301
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK +D ++L +S + + + + L HPN+V L + ++ L+ +Y G +F
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 471 SLI--HG---SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
+ HG K RAK + + Y HQ + +VH +LK+ N+LL D
Sbjct: 102 DYLVAHGRMKEKEARAK----------FRQIVSAVQYCHQKF-IVHRDLKAENLLLDADM 150
Query: 526 EACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
+AD+ + T + D Y APE + DV+S GV+L L++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 585 PP 586
P
Sbjct: 211 LP 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 390 ELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL 444
++LG G GT +K V ++ VC+K ++ K S + HM ++G L H ++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE-DKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
V L +L + Y P GSL + + L L +A+G+ Y+
Sbjct: 96 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQL----LLNWGVQIAKGMYYLE 150
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETR------ 558
+ +VH NL + NVLL + +AD+ + AD L DD LLY +T
Sbjct: 151 EH-GMVHRNLAARNVLLKSPSQVQVADFGV----ADLLPPDD-KQLLYSEAKTPIKWMAL 204
Query: 559 NASH--QATSKSDVYSFGVLLLELLT 582
+ H + T +SDV+S+GV + EL+T
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 439 LRHPNLVPLRAYF-QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCL-KIAEDV 496
LRH NLV L + K ++ +Y GSL + +R + + CL K + DV
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDV 298
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPE 556
+ + Y+ + VH +L + NVL+ D A ++D+ LT A S QD + + APE
Sbjct: 299 CEAMEYL-EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-EASSTQDTGKLPVKWTAPE 356
Query: 557 TRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVP-NEMMNWVRSAREDDGAEDER 614
+ ++KSDV+SFG+LL E+ + G+ P +P +++ V + D A D
Sbjct: 357 ALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPR---IPLKDVVPRVEKGYKMD-APDGC 411
Query: 615 LGMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647
+ +V C RPT Q+ + L+ I+
Sbjct: 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 93
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 148
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 149 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 264
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 265 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 300
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDA-SKLAGTSNEM-YEQHMESVGGLRHPNLVP 446
E LG+GS G+ YKA+ + IV +K++ S L E+ Q +S P++V
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS------PHVVK 88
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
+ + ++ +Y GS+ +I R K L I + +GL Y+H
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIR----LRNKTLTEDEIATILQSTLKGLEYLH-F 143
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPET-RNASHQ 563
R +H ++K+ N+LL + A LAD+ + D + + + APE + +
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 564 ATSKSDVYSFGVLLLELLTGKPPS------QHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+D++S G+ +E+ GKPP + F++P N + R+ + D
Sbjct: 204 CV--ADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT---NPPPTFRKPELWSDN---- 254
Query: 618 LLEVAIACNSASPEQRPTMWQVLK--MLQEIKGAVLMED 654
+ C SPEQR T Q+L+ ++ KG ++ D
Sbjct: 255 FTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRD 293
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 53/299 (17%)
Query: 379 YTLDQ---LMRASAELLGKGSLGTTYKAV--LDNRLIVCVKRLDASKLAGTSNEMYEQHM 433
YT+D+ + EL+G G G +KA +D + V ++R+ + NE E+ +
Sbjct: 4 YTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYV-IRRVKYN------NEKAEREV 56
Query: 434 ESVGGLRHPNLVPLRAYF-------QAKEERLLIYDYQPNGS----------LF------ 470
+++ L H N+V + + ++ L DY P S LF
Sbjct: 57 KALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 471 ---SLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEA 527
+L + R + L L++ E + +G+ YIH +L+H +LK SN+ L +
Sbjct: 117 DKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLIHRDLKPSNIFLVDTKQV 175
Query: 528 CLADYCL-TALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
+ D+ L T+L D + L Y +PE + +S + D+Y+ G++L ELL
Sbjct: 176 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPE-QISSQDYGKEVDLYALGLILAELL----- 229
Query: 587 SQHSFLVPNEMMNWVRSAREDDGAE--DERLGMLLEVAIACNSASPEQRPTMWQVLKML 643
H E + R+ ++ D++ LL+ + S PE RP ++L+ L
Sbjct: 230 --HVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLL---SKKPEDRPNTSEILRTL 283
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 27/291 (9%)
Query: 389 AELLGKGSLGTTYKAVL---DNRLI-VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNL 444
+LGKG G+ +A L D + V VK L A +A + E + + + HP++
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87
Query: 445 -----VPLRAYFQAK-EERLLIYDYQPNGSLFSLIHGSK-STRAKPLHWTSCLKIAEDVA 497
V LR+ + + ++I + +G L + + S+ L + ++ D+A
Sbjct: 88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT--ALTADSLQDDDPDNLLYKAP 555
G+ Y+ + +H +L + N +L D C+AD+ L+ + D + L K
Sbjct: 148 CGMEYL-SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 556 ETRN-ASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV----RSAREDDG 609
+ A + T SDV++FGV + E++T G+ P ++ + E+ N++ R + +
Sbjct: 207 ALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP--YAGIENAEIYNYLIGGNRLKQPPEC 264
Query: 610 AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMEDGELDPL 660
E+ + ++ C SA P+QRP+ + L+ I G + + DPL
Sbjct: 265 MEE-----VYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPL 310
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 24/273 (8%)
Query: 380 TLDQLMRASAELLGKGSLGTTYKAVLDNR----LIVCVKRLDASKLAGTSNEMYEQHMES 435
+D+ + ++LG+G G+ + L L V VK + KL +S E+ +
Sbjct: 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM---KLDNSSQREIEEFLSE 86
Query: 436 VGGLR---HPNLVPLRAYF-----QAKEERLLIYDYQPNGSLFS-LIHGSKSTRAKPLHW 486
++ HPN++ L Q + ++I + G L + L++ T K +
Sbjct: 87 AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL 146
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA--LTADSLQD 544
+ LK D+A G+ Y+ +H +L + N +L D C+AD+ L+ + D +
Sbjct: 147 QTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQ 205
Query: 545 DDPDNLLYKAPETRN-ASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ K + A TSKSDV++FGV + E+ T G P + + +EM +++
Sbjct: 206 GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP--YPGVQNHEMYDYLL 263
Query: 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPT 635
ED L L E+ +C P RPT
Sbjct: 264 HGHRLKQPED-CLDELYEIMYSCWRTDPLDRPT 295
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEM-YEQHMESVGGLRHPNLVPL 447
E LG+GS G A + V +K + L + M E+ + + LRHP+++ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ +++ +Y G LF I K + + + + + Y H+
Sbjct: 75 YDVITTPTDIVMVIEY-AGGELFDYI-----VEKKRMTEDEGRRFFQQIICAIEYCHRH- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKAPETRN 559
++VH +LK N+LL + +AD+ L+ + D N L Y APE N
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIN 180
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPN 595
A + DV+S G++L +L G+ P F +PN
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF-IPN 215
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 113
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 168
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 169 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 284
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
L EV + C E RP+ +++ + I
Sbjct: 285 --LYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL-- 447
+G+GS T YK LD V V L KL + + +++ E + GL+HPN+V
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 448 --RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLH-WTSCLKIAEDVAQGLSYIH 504
+ + K+ +L+ + +G+L + + K + K L W C +I +GL ++H
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW--CRQI----LKGLQFLH 146
Query: 505 -QAWRLVHGNLKSSNVLL-GPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASH 562
+ ++H +LK N+ + GP + D L L S + APE +
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEKY 206
Query: 563 QATSKSDVYSFGVLLLELLTGKPP 586
+ DVY+FG LE T + P
Sbjct: 207 DES--VDVYAFGXCXLEXATSEYP 228
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 91
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 146
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 147 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 262
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 263 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 298
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 149
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 150 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 265
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 266 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 301
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 92
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 147
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 148 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 263
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 264 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 299
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 86
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 141
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 142 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 257
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
L EV + C E RP+ +++ + I
Sbjct: 258 --LYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 94
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 149
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 150 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 265
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 266 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 301
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 112
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 167
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 168 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 283
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
L EV + C E RP+ +++ + I
Sbjct: 284 --LYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 93
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 148
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 149 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 264
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 265 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 300
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 26/278 (9%)
Query: 390 ELLGKGSLGTTYKAVL---DNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G+G G Y L D + I C VK L+ G ++ + + + HPN++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGI-IMKDFSHPNVL 89
Query: 446 PLRAY-FQAKEERLLIYDYQPNGSLFSLIHG-SKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L++ Y +G L + I + + K L + VA+G+ Y+
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 144
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNA--- 560
+ VH +L + N +L F +AD+ L D + K P A
Sbjct: 145 ASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 561 --SHQATSKSDVYSFGVLLLELLT-GKP--PSQHSFLVPNEMMNWVRSAREDDGAEDERL 615
+ + T+KSDV+SFGVLL EL+T G P P ++F + ++ R + + +
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP--- 260
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLME 653
L EV + C E RP+ +++ + I + E
Sbjct: 261 --LYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK +D ++L +S + + + L HPN+V L + ++ L+ +Y G +F
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVF 101
Query: 471 SLI--HG---SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
+ HG K RAK + + Y HQ + +VH +LK+ N+LL D
Sbjct: 102 DYLVAHGRXKEKEARAK----------FRQIVSAVQYCHQKF-IVHRDLKAENLLLDADX 150
Query: 526 EACLADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
+AD+ + T + D Y APE + DV+S GV+L L++G
Sbjct: 151 NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 585 PP 586
P
Sbjct: 211 LP 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
RHP+++ L + ++ +Y G LF I K R + + ++ + +
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEM---EARRLFQQILS 122
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD-SLQDDDPDNLLYKAPET 557
+ Y H+ +VH +LK NVLL A +AD+ L+ + +D D + Y APE
Sbjct: 123 AVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV 181
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP 586
+ A + D++S GV+L LL G P
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 39/216 (18%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E+ +G G +KA L N V VK NE YE + S+ G++H N++
Sbjct: 30 EVKARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQNE-YEVY--SLPGMKHENILQ--- 82
Query: 450 YFQAKEER--------LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
F E+R LI + GSL + +A + W IAE +A+GL+
Sbjct: 83 -FIGAEKRGTSVDVDLWLITAFHEKGSLSDFL------KANVVSWNELCHIAETMARGLA 135
Query: 502 YIHQAW---------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL- 551
Y+H+ + H ++KS NVLL + AC+AD+ L D +
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 552 ---YKAPETR----NASHQATSKSDVYSFGVLLLEL 580
Y APE N A + D+Y+ G++L EL
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL---RHPNLVPLR 448
LG G+ G YKA ++ ++ +K S E E +M + L HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
F + ++ ++ G++ +++ + +PL + + + L+Y+H +
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLHDN-K 155
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPET----RNASH 562
++H +LK+ N+L D + LAD+ ++A ++Q D + APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 563 QATSKSDVYSFGVLLLELLTGKPP 586
K+DV+S G+ L+E+ +PP
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 390 ELLGKGSLGTTY--KAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
++LG+GS G + K + D R + +K L + L + + + + HP +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS---CLKIAEDVAQGLSY 502
L FQ + + LI D+ G LF+ + +K + +T +AE +A L +
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRL-------SKEVMFTEEDVKFYLAE-LALALDH 142
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPETRNA 560
+H + +++ +LK N+LL + L D+ L+ + D + + Y APE N
Sbjct: 143 LH-SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPPSQ 588
T +D +SFGVL+ E+LTG P Q
Sbjct: 202 RGH-TQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 390 ELLGKGSLGTTY--KAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
++LG+GS G + K + D R + +K L + L + + + + HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS---CLKIAEDVAQGLSY 502
L FQ + + LI D+ G LF+ + +K + +T +AE +A L +
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL-------SKEVMFTEEDVKFYLAE-LALALDH 141
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPETRNA 560
+H + +++ +LK N+LL + L D+ L+ + D + + Y APE N
Sbjct: 142 LH-SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPPSQ 588
T +D +SFGVL+ E+LTG P Q
Sbjct: 201 RGH-TQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 391 LLGKGSLGTTYKA-VLDNRLIVCVKRLDASKL--AGTSNEMYEQHMESVGGLRHPNLVPL 447
LLGKGS Y+A + L V +K +D + AG + + ++ L+HP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRV-QNEVKIHCQLKHPSILEL 76
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
YF+ L+ + NG + + R KP + G+ Y+H +
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEARHFMHQIITGMLYLH-SH 131
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQ 563
++H +L SN+LL + +AD+ L T + + L Y +PE S
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLA--TQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
+SDV+S G + LL G+PP
Sbjct: 190 GL-ESDVWSLGCMFYTLLIGRPP 211
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 48/289 (16%)
Query: 392 LGKGSLGTTYKAVLDN------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
LG+G+ G + A N +++V VK L + + ++ + +++ E + L+H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIV 106
Query: 446 PLRAYFQAKEERLLIYDYQPNGSL----------FSLIHGSKSTRAKPLHWTSCLKIAED 495
L++++Y +G L L+ G + PL L +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT------------ALTADSLQ 543
VA G+ Y+ VH +L + N L+G + D+ ++ T ++
Sbjct: 167 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
P+++LY+ + T++SDV+SFGV+L E+ T GK P L E ++ +
Sbjct: 226 WMPPESILYR---------KFTTESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAIDCIT 274
Query: 603 SAREDDGAEDERLGMLLEVAI--ACNSASPEQRPTMWQVLKMLQEIKGA 649
RE E R AI C P+QR ++ V LQ + A
Sbjct: 275 QGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 48/289 (16%)
Query: 392 LGKGSLGTTYKAVLDN------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
LG+G+ G + A N +++V VK L + + ++ + +++ E + L+H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIV 77
Query: 446 PLRAYFQAKEERLLIYDYQPNGSL----------FSLIHGSKSTRAKPLHWTSCLKIAED 495
L++++Y +G L L+ G + PL L +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT------------ALTADSLQ 543
VA G+ Y+ VH +L + N L+G + D+ ++ T ++
Sbjct: 138 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
P+++LY+ + T++SDV+SFGV+L E+ T GK P L E ++ +
Sbjct: 197 WMPPESILYR---------KFTTESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAIDCIT 245
Query: 603 SAREDDGAEDERLGMLLEVAI--ACNSASPEQRPTMWQVLKMLQEIKGA 649
RE E R AI C P+QR ++ V LQ + A
Sbjct: 246 QGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 291
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 39/274 (14%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLR----HPNLV 445
EL+G G+ G YK V +L A K+ + + E+ + + L+ H N+
Sbjct: 30 ELVGNGTYGQVYKGRH-----VKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 446 PLRAYFQAK------EERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
F K ++ L+ ++ GS+ LI K+T+ L I ++ +G
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI---KNTKGNTLKEEWIAYICREILRG 141
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPET 557
LS++HQ +++H ++K NVLL + E L D+ ++A ++ + + APE
Sbjct: 142 LSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV 200
Query: 558 ----RNASHQATSKSDVYSFGVLLLELLTGKPP--SQHS----FLVPNEMMNWVRSARED 607
N KSD++S G+ +E+ G PP H FL+P ++S +
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK-- 258
Query: 608 DGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641
++ +E + N + QRP Q++K
Sbjct: 259 ---WSKKFQSFIESCLVKNHS---QRPATEQLMK 286
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL---RHPNLVPLR 448
LG G+ G YKA ++ ++ +K S E E +M + L HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
F + ++ ++ G++ +++ +PL + + + L+Y+H +
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLHDN-K 155
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPET----RNASH 562
++H +LK+ N+L D + LAD+ ++A +Q D + APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 563 QATSKSDVYSFGVLLLELLTGKPPSQHSFLVP 594
K+DV+S G+ L+E+ +PP H L P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPP--HHELNP 245
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 390 ELLGKGSLGTTY--KAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
++LG+GS G + K + D R + +K L + L + + + + HP +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS---CLKIAEDVAQGLSY 502
L FQ + + LI D+ G LF+ + +K + +T +AE +A L +
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL-------SKEVMFTEEDVKFYLAE-LALALDH 141
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPETRNA 560
+H + +++ +LK N+LL + L D+ L+ + D + + Y APE N
Sbjct: 142 LH-SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPPSQ 588
T +D +SFGVL+ E+LTG P Q
Sbjct: 201 RGH-TQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL---RHPNLVPLR 448
LG G+ G YKA ++ ++ +K S E E +M + L HPN+V L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTK----SEEELEDYMVEIDILASCDHPNIVKLL 100
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
F + ++ ++ G++ +++ +PL + + + L+Y+H +
Sbjct: 101 DAFYYENNLWILIEFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLHDN-K 155
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPET----RNASH 562
++H +LK+ N+L D + LAD+ ++A +Q D + APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 563 QATSKSDVYSFGVLLLELLTGKPP 586
K+DV+S G+ L+E+ +PP
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 412 CVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFS 471
+K + + ++ +SN + + + L HPN++ L +F+ K L+ + G LF
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 472 -LIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACL- 529
+IH K + I + V G++Y+H+ +VH +LK N+LL + L
Sbjct: 126 EIIHRMK------FNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALI 178
Query: 530 --ADYCLTALTADSLQ-DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
D+ L+A+ + + + Y APE + K DV+S GV+L LL G PP
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD--EKCDVWSIGVILFILLAGYPP 236
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 48/289 (16%)
Query: 392 LGKGSLGTTYKAVLDN------RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
LG+G+ G + A N +++V VK L + + ++ + +++ E + L+H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIV 83
Query: 446 PLRAYFQAKEERLLIYDYQPNGSL----------FSLIHGSKSTRAKPLHWTSCLKIAED 495
L++++Y +G L L+ G + PL L +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT------------ALTADSLQ 543
VA G+ Y+ VH +L + N L+G + D+ ++ T ++
Sbjct: 144 VAAGMVYL-AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 544 DDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
P+++LY+ + T++SDV+SFGV+L E+ T GK P L E ++ +
Sbjct: 203 WMPPESILYR---------KFTTESDVWSFGVVLWEIFTYGKQPWYQ--LSNTEAIDCIT 251
Query: 603 SAREDDGAEDERLGMLLEVAI--ACNSASPEQRPTMWQVLKMLQEIKGA 649
RE E R AI C P+QR ++ V LQ + A
Sbjct: 252 QGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 297
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 28/259 (10%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + + L +A ++ + Y+ + +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK-NFI 131
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESL-AYNKFSIK 190
Query: 568 SDVYSFGVLLLELLT-------GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620
SDV++FGVLL E+ T G PSQ L+ + R R + E + E
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKD----YRMERPEGCPEK-----VYE 241
Query: 621 VAIACNSASPEQRPTMWQV 639
+ AC +P RP+ ++
Sbjct: 242 LMRACWQWNPSDRPSFAEI 260
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 28/259 (10%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + + L +A ++ + Y+ + +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK-NFI 131
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIK 190
Query: 568 SDVYSFGVLLLELLT-------GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620
SDV++FGVLL E+ T G PSQ L+ + R R + E + E
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKD----YRMERPEGCPEK-----VYE 241
Query: 621 VAIACNSASPEQRPTMWQV 639
+ AC +P RP+ ++
Sbjct: 242 LMRACWQWNPSDRPSFAEI 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 28/264 (10%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + L +A ++ + Y+ + +
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKK-NFI 131
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIK 190
Query: 568 SDVYSFGVLLLELLT-------GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLE 620
SDV++FGVLL E+ T G PSQ L+ + R R + E + E
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKD----YRMERPEGCPEK-----VYE 241
Query: 621 VAIACNSASPEQRPTMWQVLKMLQ 644
+ AC +P RP+ ++ + +
Sbjct: 242 LMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 390 ELLGKGSLGTTYKAVLDN-RLIVCVKRLD---ASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G T YKA N IV +K++ S+ N + ++ + L HPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
L F K L++D+ +I S P H + + + QGL Y+HQ
Sbjct: 76 GLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLM---TLQGLEYLHQ 130
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTAL--TADSLQDDDPDNLLYKAPETRNASHQ 563
W ++H +LK +N+LL + LAD+ L + + Y+APE +
Sbjct: 131 HW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 564 ATSKSDVYSFGVLLLELLTGKP 585
D+++ G +L ELL P
Sbjct: 190 YGVGVDMWAVGCILAELLLRVP 211
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 390 ELLGKGSLGTTY--KAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
++LG+GS G + + V D+ + +K L + L + + + + HP +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS---CLKIAEDVAQGLSY 502
L FQ + + LI D+ G LF+ + +K + +T +AE +A GL +
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRL-------SKEVMFTEEDVKFYLAE-LALGLDH 145
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPETRNA 560
+H + +++ +LK N+LL + L D+ L+ D + + Y APE N
Sbjct: 146 LH-SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPPSQ 588
+ S +D +S+GVL+ E+LTG P Q
Sbjct: 205 QGHSHS-ADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ + + L K++ V +GL+Y+ + +++H
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 147
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ DS+ + Y +PE +H + +SD++
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV-QSDIW 206
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 207 SMGLSLVEMAVGRYP 221
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 337
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H NL + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 396
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 397 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 450
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 451 ACWQWNPSDRPSFAEIHQAFE 471
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 379
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H NL + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 438
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 439 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 492
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 493 ACWQWNPSDRPSFAEIHQAFE 513
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 33/266 (12%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEM----YEQHMESVGGLRHPNLVPL 447
LG G+ G YKA N+ L A+K+ T +E Y +E + HP +V L
Sbjct: 19 LGDGAFGKVYKA--KNKE---TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 73
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ + ++ ++ P G++ +++ +P C ++ E L+++H
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE----ALNFLHSK- 128
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPETRNASHQAT 565
R++H +LK+ NVL+ + + LAD+ ++A +LQ D + APE
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 566 S----KSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARED------DGAEDERL 615
+ K+D++S G+ L+E+ +PP H N M ++ A+ D
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPP-HHEL---NPMRVLLKIAKSDPPTLLTPSKWSVEF 244
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLK 641
L++A+ N PE RP+ Q+L+
Sbjct: 245 RDFLKIALDKN---PETRPSAAQLLE 267
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 392 LGKGSLGTTYKAVLDNRL--IVCVKRL-DASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
LGKG+ G +K++ D R +V VK++ DA + + + + + M H N+V L
Sbjct: 17 LGKGAYGIVWKSI-DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 449 AYFQAKEER--LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
+A +R L++DY L ++I ++ +P+H + + + + Y+H
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVI---RANILEPVHKQY---VVYQLIKVIKYLHSG 128
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTA-----------------LTADSLQDDDP-- 547
L+H ++K SN+LL + +AD+ L+ ++ DD P
Sbjct: 129 G-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 548 ----DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
Y+APE S + T D++S G +L E+L GKP
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKP 229
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
RHP+++ L + ++ +Y G LF I K R + + ++ + +
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEM---EARRLFQQILS 122
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS----LQDDDPDNLLYKA 554
+ Y H+ +VH +LK NVLL A +AD+ L+ + +D P+ Y A
Sbjct: 123 AVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN---YAA 178
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE + A + D++S GV+L LL G P
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ + + L K++ V +GL+Y+ + +++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ DS+ + Y +PE +H + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV-QSDIW 187
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ + + L K++ V +GL+Y+ + +++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ DS+ + Y +PE +H + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV-QSDIW 187
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEM----YEQHMESVGGLRHPNLVPL 447
LG G+ G YKA N+ L A+K+ T +E Y +E + HP +V L
Sbjct: 27 LGDGAFGKVYKA--KNKE---TGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 81
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ + ++ ++ P G++ +++ +P C ++ E L+++H
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE----ALNFLHSK- 136
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDP--DNLLYKAPETRNASHQAT 565
R++H +LK+ NVL+ + + LAD+ ++A +LQ D + APE
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 566 S----KSDVYSFGVLLLELLTGKPP 586
+ K+D++S G+ L+E+ +PP
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 442 PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
P +V F + E + ++ GSL ++ +K + L K++ V +GL+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLA 128
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNAS 561
Y+ + +++H ++K SN+L+ E L D+ ++ DS+ + Y APE +
Sbjct: 129 YLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGT 188
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
H + +SD++S G+ L+EL G+ P
Sbjct: 189 HYSV-QSDIWSMGLSLVELAVGRYP 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ K+ R P + IA V +GL+Y+ + +++H
Sbjct: 101 YSDGEISICMEHMDGGSLDQVL--KKAGRI-PEQILGKVSIA--VIKGLTYLREKHKIMH 155
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ DS+ + Y +PE +H + +SD++
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV-QSDIW 214
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 215 SMGLSLVEMAVGRYP 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ + + L K++ V +GL+Y+ + +++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ DS+ + Y +PE +H + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV-QSDIW 187
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 392 LGKGSLGTT---YKAVLDNRLIVCVKRLDASKLAGTSNE-MYEQHMESVGGLRHPNLVPL 447
LG+GS G Y + V +K ++ LA + + E+ + + LRHP+++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQK--VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
++K+E +++ +Y N LF I + + + + + + Y H+
Sbjct: 80 YDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHRH- 132
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKAPETRN 559
++VH +LK N+LL +AD+ L+ + D N L Y APE +
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIS 185
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPP 586
A + DV+S GV+L +L + P
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ + + L K++ V +GL+Y+ + +++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ DS+ + Y +PE +H + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV-QSDIW 187
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 392 LGKGSLGTT---YKAVLDNRLIVCVKRLDASKLAGTSNE-MYEQHMESVGGLRHPNLVPL 447
LG+GS G Y + V +K ++ LA + + E+ + + LRHP+++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQK--VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
++K+E +++ +Y N LF I + + + + + + Y H+
Sbjct: 74 YDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHRH- 126
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKAPETRN 559
++VH +LK N+LL +AD+ L+ + D N L Y APE +
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIS 179
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPP 586
A + DV+S GV+L +L + P
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 22/253 (8%)
Query: 392 LGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y V L V VK L + E + + + ++HPNLV L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ ++ +Y P G+L + + L +A ++ + Y+ + +
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYLEKK-NFI 152
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A + + K
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNTFSIK 211
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E ++ G + E+
Sbjct: 212 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMR 265
Query: 624 ACNSASPEQRPTM 636
AC SP RP+
Sbjct: 266 ACWKWSPADRPSF 278
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 392 LGKGSLGTT---YKAVLDNRLIVCVKRLDASKLAGTSNE-MYEQHMESVGGLRHPNLVPL 447
LG+GS G Y + V +K ++ LA + + E+ + + LRHP+++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQK--VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
++K+E +++ +Y N LF I + + + + + + Y H+
Sbjct: 79 YDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHRH- 131
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKAPETRN 559
++VH +LK N+LL +AD+ L+ + D N L Y APE +
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIS 184
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPP 586
A + DV+S GV+L +L + P
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 392 LGKGSLGTT---YKAVLDNRLIVCVKRLDASKLAGTSNE-MYEQHMESVGGLRHPNLVPL 447
LG+GS G Y + V +K ++ LA + + E+ + + LRHP+++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQK--VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
++K+E +++ +Y N LF I + + + + + + Y H+
Sbjct: 70 YDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHRH- 122
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKAPETRN 559
++VH +LK N+LL +AD+ L+ + D N L Y APE +
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIS 175
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPP 586
A + DV+S GV+L +L + P
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ + + L K++ V +GL+Y+ + +++H
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ DS+ + Y +PE +H + +SD++
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV-QSDIW 187
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + + L +A ++ + Y+ + +
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK-NFI 340
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H NL + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 399
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 400 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 453
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 454 ACWQWNPSDRPSFAEIHQAFE 474
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 23/280 (8%)
Query: 373 AGEAQLY---TLDQLMRASAELLGKGSLGTTYKAVLDNR---LIVCVKRLDASKLAGTSN 426
+G LY T+D L +L G G+ G + +++ R L +K ++ + +
Sbjct: 9 SGRENLYFQGTIDDLFIFKRKL-GSGAFGDVH--LVEERSSGLERVIKTINKDR-SQVPM 64
Query: 427 EMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHW 486
E E +E + L HPN++ + F+ ++ + G L I S R K L
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI-VSAQARGKALSE 123
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTAL-TADSL 542
++ + + L+Y H + +VH +LK N+L P + D+ L L +D
Sbjct: 124 GYVAELMKQMMNALAYFH-SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH 182
Query: 543 QDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR 602
+ LY APE T K D++S GV++ LLTG P + L E +
Sbjct: 183 STNAAGTALYMAPEV--FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL---EEVQQKA 237
Query: 603 SAREDDGAEDER--LGMLLEVAIACNSASPEQRPTMWQVL 640
+ +E + A + R +++ + PE+RP+ QVL
Sbjct: 238 TYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ + + L K++ V +GL+Y+ + +++H
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLREKHKIMH 131
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ D + ++ Y +PE +H + +SD++
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSV-QSDIW 190
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 191 SMGLSLVEMAVGRYP 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 390 ELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSN---EMYEQHMESVGGLRHPNLV 445
++LGKGS G + A +K L + + M E+ + S+ HP L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLT 82
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI--------AEDVA 497
+ FQ KE + +Y G L H SC K A ++
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDLM-------------YHIQSCHKFDLSRATFYAAEII 129
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAP 555
GL ++H +V+ +LK N+LL D +AD+ C + D+ ++ Y AP
Sbjct: 130 LGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAP 188
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E + D +SFGVLL E+L G+ P
Sbjct: 189 EIL-LGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E +G+G+ GT Y A+ + V +++++ + E+ + + ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYL 84
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ +E ++ +Y GSL ++ + + + + Q L ++H +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN-Q 137
Query: 509 LVHGNLKSSNVLLGPDFEACLAD--YCLTALTADSLQDDDPDNLLYKAPE--TRNASHQA 564
++H N+KS N+LLG D L D +C S + + APE TR A
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY--- 194
Query: 565 TSKSDVYSFGVLLLELLTGKPP 586
K D++S G++ +E++ G+PP
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
RHP+++ L + ++ +Y G LF I K+ R L ++ + +
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI--CKNGR---LDEKESRRLFQQILS 127
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS----LQDDDPDNLLYKA 554
G+ Y H+ +VH +LK NVLL A +AD+ L+ + +D P+ Y A
Sbjct: 128 GVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPN---YAA 183
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE + A + D++S GV+L LL G P
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 133
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 192
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 193 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 247 ACWQWNPSDRPSFAEI 262
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 439 LRHPNLVPLRAYFQAKEER--LLIYDYQPNGSLFSLIHGSKSTRA--KPLHWTSCL--KI 492
L+HPN++ L+ F + +R L++DY + L+ +I ++++A KP+ + +
Sbjct: 75 LKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDF-EACLADYCLTALTADSLQ---DD 545
+ G+ Y+H W ++H +LK +N+L+ GP+ +AD L L+ D
Sbjct: 134 LYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 546 DPD--NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
DP Y+APE + T D+++ G + ELLT +P
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 234
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G+ G +K +V ++L ++ + ++ + P +V F
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ E + ++ GSL ++ K P + IA V +GL+Y+ + +++H
Sbjct: 136 YSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA--VIKGLTYLREKHKIMH 190
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVY 571
++K SN+L+ E L D+ ++ DS+ + Y +PE +H + +SD++
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV-QSDIW 249
Query: 572 SFGVLLLELLTGKPP 586
S G+ L+E+ G+ P
Sbjct: 250 SMGLSLVEMAVGRYP 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 133
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 192
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 193 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 247 ACWQWNPSDRPSFAEI 262
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 138
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 197
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 198 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 252 ACWQWNPSDRPSFAEI 267
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 146
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 205
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 206 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 259
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 260 ACWQWNPSDRPSFAEI 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 135
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 194
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 195 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 248
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 249 ACWQWNPSDRPSFAEI 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 134
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIK 193
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 194 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 247
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 248 ACWQWNPSDRPSFAEI 263
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 137
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 196
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 197 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 250
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 251 ACWQWNPSDRPSFAEIHQAFE 271
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 56/292 (19%)
Query: 392 LGKGSLGTTYKAVLDN------RLIVCVKRL-DASKLAGTSNEMYEQHMESVGGLRHPNL 444
LG+G+ G + A N +++V VK L DAS + + + + E + L+H ++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD---NARKDFHREAELLTNLQHEHI 77
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSL--FSLIHG------SKSTRAKPLHWTSCLKIAEDV 496
V + +++++Y +G L F HG ++ L + L IA+ +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD----------- 545
A G+ Y+ + VH +L + N L+G + + D+ ++ D D
Sbjct: 138 AAGMVYL-ASQHFVHRDLATRNCLVGENLLVKIGDF---GMSRDVYSTDYYRVGGHTMLP 193
Query: 546 ----DPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNW 600
P++++Y+ + T++SDV+S GV+L E+ T GK P L NE++
Sbjct: 194 IRWMPPESIMYR---------KFTTESDVWSLGVVLWEIFTYGKQPWYQ--LSNNEVIEC 242
Query: 601 VRSAR---EDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGA 649
+ R E + E+ + C P R + + +LQ + A
Sbjct: 243 ITQGRVLQRPRTCPQE----VYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 390 ELLGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LG G+ T YK + + V +K + GT + + + + L+H N+V L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIRE-ISLMKELKHENIVRLY 69
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ + L++++ N + + + L + QGL++ H+ +
Sbjct: 70 DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-K 128
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNASHQATS 566
++H +LK N+L+ + L D+ L + + L Y+AP+ S ++
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST 188
Query: 567 KSDVYSFGVLLLELLTGKP 585
D++S G +L E++TGKP
Sbjct: 189 SIDIWSCGCILAEMITGKP 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 20/206 (9%)
Query: 390 ELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSN---EMYEQHMESVGGLRHPNLV 445
++LGKGS G + A +K L + + M E+ + S+ HP L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLT 81
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLI---HGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ FQ KE + +Y G L I H +RA A ++ GL +
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT--------FYAAEIILGLQF 133
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPETRNA 560
+H +V+ +LK N+LL D +AD+ C + D+ + Y APE
Sbjct: 134 LHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL-L 191
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPP 586
+ D +SFGVLL E+L G+ P
Sbjct: 192 GQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 135
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 194
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 195 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 248
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 249 ACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 134
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL-AYNKFSIK 193
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 194 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 247
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 248 ACWQWNPSDRPSFAEI 263
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 138
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 197
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 198 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 138
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 197
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 198 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 138
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIK 197
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 198 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 392 LGKGSLGTTYKAV---LDNR---LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
LG+G G KA L R V VK L + ++ + + + HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE-FNVLKQVNHPHVI 89
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKST-------------------RAKPLHW 486
L LLI +Y GSL + S+ + L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT--ALTADSLQD 544
+ A ++QG+ Y+ + +LVH +L + N+L+ + ++D+ L+ DS
Sbjct: 150 GDLISFAWQISQGMQYLAEM-KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK 208
Query: 545 DDPDNLLYKAPETRNA-SHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWV 601
+ K + H T++SDV+SFGVLL E++T G P + + P + N +
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP---YPGIPPERLFNLL 265
Query: 602 RSA----REDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
++ R D+ +E+ + + + C P++RP + K L+++
Sbjct: 266 KTGHRMERPDNCSEE-----MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + L +A ++ + Y+ + +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKK-NFI 133
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 192
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 193 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFE 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + ++ L +A ++ + Y+ + +
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKK-NFI 135
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL-AYNKFSIK 194
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 195 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 248
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 249 ACWQWNPSDRPSFAEI 264
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 392 LGKGSLGTTYKAV---LDNR---LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
LG+G G KA L R V VK L + ++ + + + HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE-FNVLKQVNHPHVI 89
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKST-------------------RAKPLHW 486
L LLI +Y GSL + S+ + L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT--ALTADSLQD 544
+ A ++QG+ Y+ + +LVH +L + N+L+ + ++D+ L+ DS
Sbjct: 150 GDLISFAWQISQGMQYLAEM-KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 545 DDPDNLLYKAPETRNA-SHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWV 601
+ K + H T++SDV+SFGVLL E++T G P + + P + N +
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP---YPGIPPERLFNLL 265
Query: 602 RSA----REDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
++ R D+ +E+ + + + C P++RP + K L+++
Sbjct: 266 KTGHRMERPDNCSEE-----MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 383 QLMRASAELLGKGSLGTTY--KAVLDNRLIV--CVKRLDASKLAGTSNEMYEQHMESVGG 438
Q++R LG GS G + ++ + R +K+ +L + E+ M S+
Sbjct: 9 QILRT----LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI-- 62
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
+ HP ++ + FQ ++ +I DY G LFSL+ S+ P+ A +V
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF-PNPV----AKFYAAEVCL 117
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKAPE 556
L Y+H +++ +LK N+LL + + D+ D PD Y APE
Sbjct: 118 ALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD---YIAPE 173
Query: 557 TRNASHQATSKS-DVYSFGVLLLELLTGKPP 586
S + +KS D +SFG+L+ E+L G P
Sbjct: 174 V--VSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 422 AGTSNEMYEQHMESVGGLR----HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSK 477
A E+ E ++ V LR HPN++ L+ ++ L++D G LF +
Sbjct: 47 AEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---- 102
Query: 478 STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL 537
T L KI + + + +H+ +VH +LK N+LL D L D+ +
Sbjct: 103 -TEKVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 160
Query: 538 TADSLQDDDPDNLL--------YKAPE----TRNASHQATSKS-DVYSFGVLLLELLTGK 584
DP L Y APE + N +H K D++S GV++ LL G
Sbjct: 161 L-------DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 213
Query: 585 PPSQH 589
PP H
Sbjct: 214 PPFWH 218
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 383 QLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHP 442
++ + +++G GS G ++A L V +K++ K + ++ + ++HP
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK------RFKNRELQIMRIVKHP 92
Query: 443 NLVPLRAYFQA----KEERLL--IYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
N+V L+A+F + K+E L + +Y P + H +K + P+ +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY--MYQL 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEAC-LADYCLTALTADSLQDDDPD-----NL 550
+ L+YIH + + H ++K N+LL P L D+ +A L +P+ +
Sbjct: 151 LRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDFG----SAKILIAGEPNVSXICSR 205
Query: 551 LYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
Y+APE + T+ D++S G ++ EL+ G+P
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQP 240
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + L +A ++ + Y+ + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKK-NFI 133
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 192
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 193 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 247 ACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 22/256 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + L +A ++ + Y+ + +
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKK-NFI 133
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 192
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 193 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 624 ACNSASPEQRPTMWQV 639
AC +P RP+ ++
Sbjct: 247 ACWQWNPSDRPSFAEI 262
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E +G+G+ GT Y A+ + V +++++ + E+ + + ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYL 83
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ +E ++ +Y GSL ++ + + + + Q L ++H +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN-Q 136
Query: 509 LVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPE--TRNASHQA 564
++H ++KS N+LLG D L D+ C S + + + APE TR A
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY--- 193
Query: 565 TSKSDVYSFGVLLLELLTGKPP 586
K D++S G++ +E++ G+PP
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + L +A ++ + Y+ + +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKK-NFI 133
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 192
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 193 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 246
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 22/261 (8%)
Query: 392 LGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG G G Y+ V L V VK L + E + + + ++HPNLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ +I ++ G+L + + + + L +A ++ + Y+ + +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKK-NFI 138
Query: 511 HGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDN--LLYKAPETRNASHQATSK 567
H +L + N L+G + +AD+ L+ L T D+ + + APE+ A ++ + K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-AYNKFSIK 197
Query: 568 SDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLG---MLLEVAI 623
SDV++FGVLL E+ T G P P ++ V E D + G + E+
Sbjct: 198 SDVWAFGVLLWEIATYGMSP------YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR 251
Query: 624 ACNSASPEQRPTMWQVLKMLQ 644
AC +P RP+ ++ + +
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK +D K E+ + + +H N+V + + EE ++ ++ G+L
Sbjct: 73 VAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 471 SLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLA 530
++ + L+ + E V Q L+Y+H A ++H ++KS ++LL D L+
Sbjct: 131 DIVSQVR------LNEEQIATVCEAVLQALAYLH-AQGVIHRDIKSDSILLTLDGRVKLS 183
Query: 531 DYCLTALTADSLQDDDPDNL------LYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
D+ A + D P + APE + S AT + D++S G++++E++ G+
Sbjct: 184 DFGFCA----QISKDVPKRKXLVGTPYWMAPEVISRSLYAT-EVDIWSLGIMVIEMVDGE 238
Query: 585 PP 586
PP
Sbjct: 239 PP 240
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 422 AGTSNEMYEQHMESVGGLR----HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSK 477
A E+ E ++ V LR HPN++ L+ ++ L++D G LF +
Sbjct: 60 AEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---- 115
Query: 478 STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL 537
T L KI + + + +H+ +VH +LK N+LL D L D+ +
Sbjct: 116 -TEKVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 538 TADSLQDDDPDNLL--------YKAPE----TRNASHQATSKS-DVYSFGVLLLELLTGK 584
DP L Y APE + N +H K D++S GV++ LL G
Sbjct: 174 L-------DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
Query: 585 PPSQH 589
PP H
Sbjct: 227 PPFWH 231
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 422 AGTSNEMYEQHMESVGGLR----HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSK 477
A E+ E ++ V LR HPN++ L+ ++ L++D G LF +
Sbjct: 60 AEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---- 115
Query: 478 STRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL 537
T L KI + + + +H+ +VH +LK N+LL D L D+ +
Sbjct: 116 -TEKVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 538 TADSLQDDDPDNLL--------YKAPE----TRNASHQATSKS-DVYSFGVLLLELLTGK 584
DP L Y APE + N +H K D++S GV++ LL G
Sbjct: 174 L-------DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
Query: 585 PPSQH 589
PP H
Sbjct: 227 PPFWH 231
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
EL+GKG G Y V ++ +D + + +++ + + RH N+V
Sbjct: 38 GELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ +I +L+S++ +K L +IA+++ +G+ Y+H A
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIV----LDVNKTRQIAQEIVKGMGYLH-AKG 150
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTA--------DSLQDDD-------PDNLLYK 553
++H +LKS NV + + + D+ L +++ D L+ + P+ +
Sbjct: 151 ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDE 613
+P+T + SDV++ G + EL + P + P E + W
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ---PAEAIIWQMGTGMKPNLS-- 264
Query: 614 RLGMLLEVA---IACNSASPEQRPTMWQVLKMLQEI 646
++GM E++ + C + E+RPT +++ ML+++
Sbjct: 265 QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 390 ELLGKGSLGTTYKAVLDN-----RLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHP 442
+++G G G YK +L + V +K L A T + + E+ +G H
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHH 106
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
N++ L + ++I +Y NG+L + K L L+ +A G+ Y
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLR---GIAAGMKY 162
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----------LLY 552
+ VH +L + N+L+ + ++D+ L+ + +DDP+ + +
Sbjct: 163 LANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVL-----EDDPEATYTTSGGKIPIRW 216
Query: 553 KAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
APE + + TS SDV+SFG+++ E++T G+ P
Sbjct: 217 TAPEA-ISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNE---MYEQHMESVGGLRHPNLVP 446
E +GKG G ++ + A K+ + +E E + + LRH N++
Sbjct: 14 ECVGKGRYGEVWRGSWQGENV-------AVKIFSSRDEKSWFRETELYNTVMLRHENILG 66
Query: 447 LRAY----FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
A + + LI Y GSL+ + + L SCL+I +A GL++
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAH 120
Query: 503 IHQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
+H + H +LKS N+L+ + + C+AD L + + S D N
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 550 LLYKAPETRNASHQ-----ATSKSDVYSFGVLLLEL 580
Y APE + + Q + + D+++FG++L E+
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNE---MYEQHMESVGGLRHPNLVP 446
E +GKG G ++ + A K+ + +E E + + LRH N++
Sbjct: 43 ECVGKGRYGEVWRGSWQGENV-------AVKIFSSRDEKSWFRETELYNTVMLRHENILG 95
Query: 447 LRAY----FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
A + + LI Y GSL+ + + L SCL+I +A GL++
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAH 149
Query: 503 IHQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
+H + H +LKS N+L+ + + C+AD L + + S D N
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 550 LLYKAPETRNASHQ-----ATSKSDVYSFGVLLLEL 580
Y APE + + Q + + D+++FG++L E+
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEM-YEQHMESVGGLRHPNLVP 446
E+LG G + + A D RL V VK L A S + + + ++ L HP +V
Sbjct: 18 EILGFGGMSEVHLA-RDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 447 LRAYFQAKEER----LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ A +A+ ++ +Y +L ++H P+ +++ D Q L++
Sbjct: 77 VYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNF 131
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAPET 557
HQ ++H ++K +N+++ + D+ + ADS + Y +PE
Sbjct: 132 SHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP 586
++SDVYS G +L E+LTG+PP
Sbjct: 191 ARGD-SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNE---MYEQHMESVGGLRHPNLVP 446
E +GKG G ++ + A K+ + +E E + + LRH N++
Sbjct: 14 ECVGKGRYGEVWRGSWQGENV-------AVKIFSSRDEKSWFRETELYNTVMLRHENILG 66
Query: 447 LRAY----FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
A + + LI Y GSL+ + + L SCL+I +A GL++
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAH 120
Query: 503 IHQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
+H + H +LKS N+L+ + + C+AD L + + S D N
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 550 LLYKAPETRNASHQ-----ATSKSDVYSFGVLLLEL 580
Y APE + + Q + + D+++FG++L E+
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E +G+G+ GT Y A+ + V +++++ + E+ + + ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYL 83
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ +E ++ +Y GSL ++ + + + + Q L ++H +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN-Q 136
Query: 509 LVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPE--TRNASHQA 564
++H ++KS N+LLG D L D+ C S + + APE TR A
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG-- 194
Query: 565 TSKSDVYSFGVLLLELLTGKPP 586
K D++S G++ +E++ G+PP
Sbjct: 195 -PKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E +G+G+ GT Y A+ + V +++++ + E+ + + ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYL 84
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ +E ++ +Y GSL ++ + + + + Q L ++H +
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN-Q 137
Query: 509 LVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPE--TRNASHQA 564
++H ++KS N+LLG D L D+ C S + + APE TR A
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY--- 194
Query: 565 TSKSDVYSFGVLLLELLTGKPP 586
K D++S G++ +E++ G+PP
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 391 LLGKGSLGTTYKAV----LDNRLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNL 444
+LGKG G ++ + I +K L + + + + E + ++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
V L FQ + LI +Y G LF + + T+C +AE ++ L ++H
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLAE-ISMALGHLH 138
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET--RNA 560
Q +++ +LK N++L L D+ C ++ ++ + Y APE R+
Sbjct: 139 QKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSG 197
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPP 586
++A D +S G L+ ++LTG PP
Sbjct: 198 HNRAV---DWWSLGALMYDMLTGAPP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 391 LLGKGSLGTTYKAV----LDNRLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNL 444
+LGKG G ++ + I +K L + + + + E + ++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
V L FQ + LI +Y G LF + + T+C +AE ++ L ++H
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLAE-ISMALGHLH 138
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET--RNA 560
Q +++ +LK N++L L D+ C ++ ++ + Y APE R+
Sbjct: 139 QKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG 197
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPP 586
++A D +S G L+ ++LTG PP
Sbjct: 198 HNRAV---DWWSLGALMYDMLTGAPP 220
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E +G+G+ GT Y A+ + V +++++ + E+ + + ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYL 83
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ +E ++ +Y GSL ++ + + + + Q L ++H +
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN-Q 136
Query: 509 LVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPE--TRNASHQA 564
++H ++KS N+LLG D L D+ C S + + APE TR A
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY--- 193
Query: 565 TSKSDVYSFGVLLLELLTGKPP 586
K D++S G++ +E++ G+PP
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S +++ ++ + L +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVK 72
Query: 447 LR--AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
R +Y + E L+ +Y P+G L + + RA+ L + L + + +G+ Y+
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRAR-LDASRLLLYSSQICKGMEYLG 128
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLT---ALTADSLQDDDPDN--LLYKAPETRN 559
R VH +L + N+L+ + +AD+ L L D +P + + APE+
Sbjct: 129 SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL- 186
Query: 560 ASHQATSKSDVYSFGVLLLELLT 582
+ + + +SDV+SFGV+L EL T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 32/218 (14%)
Query: 391 LLGKGSLGTTYKA--VLDNRLIVCVK-RLDASKLAGTSNEMY------EQHM--ESVGGL 439
+LG+G+ G KA LD+R K R KL+ +E+ Q++ L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
N V + K + +Y NG+L+ LIH + + +W ++ + +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILEA 128
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA---LTADSLQDD------DPDNL 550
LSYIH + ++H +LK N+ + + D+ L + D L+ D DNL
Sbjct: 129 LSYIH-SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 551 -------LYKAPETRNASHQATSKSDVYSFGVLLLELL 581
+Y A E + + K D+YS G++ E++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 19/220 (8%)
Query: 380 TLDQLMRASAELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKL-AGTSNEMYEQHMESVG 437
T+ + MR LGKG Y+ +D + + K + S L E +
Sbjct: 24 TMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 81
Query: 438 GLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVA 497
L +P++V +F+ + ++ + SL L R K +
Sbjct: 82 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-----HKRRKAVTEPEARYFMRQTI 136
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL-TALTADSLQDDD----PDNLLY 552
QG+ Y+H R++H +LK N+ L D + + D+ L T + D + D P+ Y
Sbjct: 137 QGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN---Y 192
Query: 553 KAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + D++S G +L LL GKPP + S L
Sbjct: 193 IAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 231
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 392 LGKGSLGTTYKAV---LDNR---LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
LG+G G KA L R V VK L + ++ + + + HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSE-FNVLKQVNHPHVI 89
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKST-------------------RAKPLHW 486
L LLI +Y GSL + S+ + L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT--ALTADSLQD 544
+ A ++QG+ Y+ + LVH +L + N+L+ + ++D+ L+ DS
Sbjct: 150 GDLISFAWQISQGMQYLAEM-SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVK 208
Query: 545 DDPDNLLYKAPETRNA-SHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWV 601
+ K + H T++SDV+SFGVLL E++T G P + + P + N +
Sbjct: 209 RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP---YPGIPPERLFNLL 265
Query: 602 RSA----REDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
++ R D+ +E+ + + + C P++RP + K L+++
Sbjct: 266 KTGHRMERPDNCSEE-----MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHW 486
+E+ + + L H N+V + + + L+ +Y +L I HG PL
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSV 110
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADSLQDD 545
+ + + G+ + H R+VH ++K N+L+ + + D+ + AL+ SL
Sbjct: 111 DTAINFTNQILDGIKHAHD-MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169
Query: 546 DP--DNLLYKAPETRNASHQATSK-SDVYSFGVLLLELLTGKPP 586
+ + Y +PE A +AT + +D+YS G++L E+L G+PP
Sbjct: 170 NHVLGTVQYFSPE--QAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E +G+G+ G YKA + +K++ K + + + L+H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 450 YFQAKEERLLIYDY--QPNGSLFSLIHGS-KSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
K+ +L++++ Q L + G +S AK + G++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHDR 119
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNASHQA 564
R++H +LK N+L+ + E +AD+ L ++ + L Y+AP+ S +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 565 TSKSDVYSFGVLLLELLTGKP 585
++ D++S G + E++ G P
Sbjct: 179 STTIDIWSVGCIFAEMVNGTP 199
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 392 LGKGSLGTTYKAVLD-----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LG+G G D +V VK L A ++Q ++ + L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 447 LRAYFQAKEER--LLIYDYQPNGSLFSLIHGSKSTRAKPLH---WTSCLKIAEDVAQGLS 501
+ + + E+ L+ +Y P GSL + P H L A+ + +G++
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------PRHSIGLAQLLLFAQQICEGMA 131
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-----LQDDDPDNLLYKAPE 556
Y+H A +H NL + NVLL D + D+ L + +++D + + APE
Sbjct: 132 YLH-AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKPPSQ 588
++ SDV+SFGV L ELLT SQ
Sbjct: 191 CLK-EYKFYYASDVWSFGVTLYELLTHCDSSQ 221
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 22/215 (10%)
Query: 377 QLYTLDQLMRASAELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMES 435
Q YTL+ +G+GS G AV R+ K++ K + ++Q +E
Sbjct: 9 QYYTLENT-------IGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEI 59
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+ L HPN++ L F+ + L+ + G LF + + R + +I +D
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE-----SDAARIMKD 114
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTA-LTADSLQDDDPDNLL 551
V ++Y H+ + H +LK N L PD L D+ L A +
Sbjct: 115 VLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPY 173
Query: 552 YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
Y +P+ + + D +S GV++ LL G PP
Sbjct: 174 YVSPQVLEGLY--GPECDEWSAGVMMYVLLCGYPP 206
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L HPN++ L F+ K+ L+ ++ G LF I I + +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----INRHKFDECDAANIMKQILS 157
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPD---FEACLADYCLTA-LTADSLQDDDPDNLLYKA 554
G+ Y+H+ +VH ++K N+LL + D+ L++ + D D Y A
Sbjct: 158 GICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE + K DV+S GV++ LL G PP
Sbjct: 217 PEVLKKKY--NEKCDVWSCGVIMYILLCGYPP 246
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E +G+G+ G YKA + +K++ K + + + L+H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 450 YFQAKEERLLIYDY--QPNGSLFSLIHGS-KSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
K+ +L++++ Q L + G +S AK + G++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHDR 119
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNASHQA 564
R++H +LK N+L+ + E +AD+ L ++ + L Y+AP+ S +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 565 TSKSDVYSFGVLLLELLTGKP 585
++ D++S G + E++ G P
Sbjct: 179 STTIDIWSVGCIFAEMVNGTP 199
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
E +G+G+ G YKA + +K++ K + + + L+H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 450 YFQAKEERLLIYDY--QPNGSLFSLIHGS-KSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
K+ +L++++ Q L + G +S AK + G++Y H
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGIAYCHDR 119
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNASHQA 564
R++H +LK N+L+ + E +AD+ L ++ + L Y+AP+ S +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 565 TSKSDVYSFGVLLLELLTGKP 585
++ D++S G + E++ G P
Sbjct: 179 STTIDIWSVGCIFAEMVNGAP 199
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEM-YEQHMESVGGLRHPNLVPL 447
E+LG G + + A L + V VK L A S + + + ++ L HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 448 RAYFQAKEER----LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+A+ ++ +Y +L ++H P+ +++ D Q L++
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFS 132
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAPETR 558
HQ ++H ++K +N+L+ + D+ + ADS + Y +PE
Sbjct: 133 HQNG-IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
++SDVYS G +L E+LTG+PP
Sbjct: 192 RGD-SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 22/215 (10%)
Query: 377 QLYTLDQLMRASAELLGKGSLGTTYKAVLD-NRLIVCVKRLDASKLAGTSNEMYEQHMES 435
Q YTL+ +G+GS G AV R+ K++ K + ++Q +E
Sbjct: 26 QYYTLENT-------IGRGSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEI 76
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+ L HPN++ L F+ + L+ + G LF + + R + +I +D
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE-----SDAARIMKD 131
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTA-LTADSLQDDDPDNLL 551
V ++Y H+ + H +LK N L PD L D+ L A +
Sbjct: 132 VLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPY 190
Query: 552 YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
Y +P+ + + D +S GV++ LL G PP
Sbjct: 191 YVSPQVLEGLY--GPECDEWSAGVMMYVLLCGYPP 223
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GFVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 19/220 (8%)
Query: 380 TLDQLMRASAELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKL-AGTSNEMYEQHMESVG 437
T+ + MR LGKG Y+ +D + + K + S L E +
Sbjct: 40 TMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 438 GLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVA 497
L +P++V +F+ + ++ + SL L R K +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-----HKRRKAVTEPEARYFMRQTI 152
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL-TALTADSLQDDD----PDNLLY 552
QG+ Y+H R++H +LK N+ L D + + D+ L T + D + D P+ Y
Sbjct: 153 QGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN---Y 208
Query: 553 KAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + D++S G +L LL GKPP + S L
Sbjct: 209 IAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 390 ELLGK-GSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
E++G+ G G YKA + ++ K +D + M E ++ + HPN+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE--IDILASCDHPNIVKL 72
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
F + ++ ++ G++ +++ + +PL + + + L+Y+H
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLDALNYLHDN- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDP--DNLLYKAPET----RNA 560
+++H +LK+ N+L D + LAD+ ++A T +Q D + APE +
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPP 586
K+DV+S G+ L+E+ +PP
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 9/198 (4%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
L+G+GS G K D IV +K+ S ++ + ++ + LRH NLV L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 450 YFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
+ K+ L++++ + L L L + K + G+ + H + +
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDL-----ELFPNGLDYQVVQKYLFQIINGIGFCH-SHNI 145
Query: 510 VHGNLKSSNVLLGPDFEACLADYCL--TALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
+H ++K N+L+ L D+ T + DD+ Y+APE +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 568 SDVYSFGVLLLELLTGKP 585
DV++ G L+ E+ G+P
Sbjct: 206 VDVWAIGCLVTEMFMGEP 223
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 31/293 (10%)
Query: 376 AQLYTLDQLMRASAEL-----LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE 430
A +Y D+ A ++ LG+GS G Y+ V + + A K + M E
Sbjct: 2 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 61
Query: 431 --QHMESVGGLRHPN---LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK--- 482
+ + ++ N +V L + L+I + G L S + + A
Sbjct: 62 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 483 --PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
P + +++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRD 177
Query: 541 SLQDD----DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFL 592
+ D LL + +PE+ T+ SDV+SFGV+L E+ T + P Q L
Sbjct: 178 IYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--L 234
Query: 593 VPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+++ +V D D ML E+ C +P+ RP+ +++ ++E
Sbjct: 235 SNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
AE LG+G G ++ V + + + K+ GT + ++ + + RH N++ L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKF--VKVKGTDQVLVKKEISILNIARHRNILHLH 67
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
F++ EE ++I+++ +F I +T A L+ + V + L ++H +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI----NTSAFELNEREIVSYVHQVCEALQFLH-SHN 122
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNAS-HQ---A 564
+ H +++ N++ + + + A L+ D LL+ APE HQ
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIK--IIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 565 TSKSDVYSFGVLLLELLTGKPP 586
++ +D++S G L+ LL+G P
Sbjct: 181 STATDMWSLGTLVYVLLSGINP 202
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 124
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 125 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 178
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 179 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 225
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 141
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 142 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 195
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 196 RGGKIPIRWTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 242
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 243 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 31/293 (10%)
Query: 376 AQLYTLDQLMRASAEL-----LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE 430
A +Y D+ A ++ LG+GS G Y+ V + + A K + M E
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 431 --QHMESVGGLRHPN---LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK--- 482
+ + ++ N +V L + L+I + G L S + + A
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 483 --PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
P + +++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRD 187
Query: 541 SLQDD----DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFL 592
+ D LL + +PE+ T+ SDV+SFGV+L E+ T + P Q L
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--L 244
Query: 593 VPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+++ +V D D ML E+ C +P+ RP+ +++ ++E
Sbjct: 245 SNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
+RL +S+ G S E E+ + + +RHPN++ L F+ K + +LI + G LF +
Sbjct: 41 RRLSSSR-RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 99
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H R+ H +LK N++L P+ L
Sbjct: 100 AEKES-----LTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKL 153
Query: 530 ADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
D+ + + A + + + APE N ++D++S GV+ LL+G P
Sbjct: 154 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGASP 210
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEM-YEQHMESVGGLRHPNLVPL 447
E+LG G + + A L + V VK L A S + + + ++ L HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 448 RAYFQAKEER----LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+A+ ++ +Y +L ++H P+ +++ D Q L++
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFS 132
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAPETR 558
HQ ++H ++K +N+++ + D+ + ADS + Y +PE
Sbjct: 133 HQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
++SDVYS G +L E+LTG+PP
Sbjct: 192 RGD-SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 392 LGKGSLGTTYKAVLD-----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LG+G G D +V VK L A ++Q ++ + L H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 447 LRAYFQAKEER--LLIYDYQPNGSLFSLIHGSKSTRAKPLH---WTSCLKIAEDVAQGLS 501
+ + + E+ L+ +Y P GSL + P H L A+ + +G++
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------PRHSIGLAQLLLFAQQICEGMA 131
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-----LQDDDPDNLLYKAPE 556
Y+H +H NL + NVLL D + D+ L + +++D + + APE
Sbjct: 132 YLHSQ-HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKPPSQ 588
++ SDV+SFGV L ELLT SQ
Sbjct: 191 CLK-EYKFYYASDVWSFGVTLYELLTHCDSSQ 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI--VCVKRLDASKLA-GTSNEM-----YEQHMESVGGLR 440
++ LG G+ G K + + V +K + K A G++ E E +E + L
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP ++ ++ +F A E+ ++ + G LF + G+K L +C + +
Sbjct: 74 HPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAV 127
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACL---ADYCLTALTAD-SLQDDDPDNLLYKAPE 556
Y+H+ ++H +LK NVLL E CL D+ + + + SL Y APE
Sbjct: 128 QYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 557 TRNASHQA--TSKSDVYSFGVLLLELLTGKPP-SQH 589
+ A D +S GV+L L+G PP S+H
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI--VCVKRLDASKLA-GTSNEM-----YEQHMESVGGLR 440
++ LG G+ G K + + V +K + K A G++ E E +E + L
Sbjct: 21 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP ++ ++ +F A E+ ++ + G LF + G+K L +C + +
Sbjct: 80 HPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAV 133
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACL---ADYCLTALTAD-SLQDDDPDNLLYKAPE 556
Y+H+ ++H +LK NVLL E CL D+ + + + SL Y APE
Sbjct: 134 QYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 192
Query: 557 TRNASHQA--TSKSDVYSFGVLLLELLTGKPP-SQH 589
+ A D +S GV+L L+G PP S+H
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
+RL +S+ G S E E+ + + +RHPN++ L F+ K + +LI + G LF +
Sbjct: 48 RRLSSSR-RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 106
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H R+ H +LK N++L P+ L
Sbjct: 107 AEKES-----LTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKL 160
Query: 530 ADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
D+ + + A + + + APE N ++D++S GV+ LL+G P
Sbjct: 161 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGASP 217
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 42/224 (18%)
Query: 459 LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW-------RLVH 511
LI DY NGSL+ + KST L S LK+A GL ++H + H
Sbjct: 112 LITDYHENGSLYDYL---KST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 512 GNLKSSNVLLGPDFEACLADYCLTA-LTADSLQDDDPDNL-----LYKAP----ETRNAS 561
+LKS N+L+ + C+AD L +D+ + D P N Y P E+ N +
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRN 225
Query: 562 H-QATSKSDVYSFGVLLLEL----LTGKPPSQHSF----LVPNE----------MMNWVR 602
H Q+ +D+YSFG++L E+ ++G ++ LVP++ + +R
Sbjct: 226 HFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLR 285
Query: 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
+ + + DE L + ++ C + +P R T +V K L ++
Sbjct: 286 PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEM-YEQHMESVGGLRHPNLVPL 447
E+LG G + + A L + V VK L A S + + + ++ L HP +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 448 RAYFQAKEER----LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+A+ ++ +Y +L ++H P+ +++ D Q L++
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFS 132
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAPETR 558
HQ ++H ++K +N+++ + D+ + ADS + Y +PE
Sbjct: 133 HQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
++SDVYS G +L E+LTG+PP
Sbjct: 192 RGD-SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI--VCVKRLDASKLA-GTSNEM-----YEQHMESVGGLR 440
++ LG G+ G K + + V +K + K A G++ E E +E + L
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP ++ ++ +F A E+ ++ + G LF + G+K L +C + +
Sbjct: 74 HPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAV 127
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACL---ADYCLTALTAD-SLQDDDPDNLLYKAPE 556
Y+H+ ++H +LK NVLL E CL D+ + + + SL Y APE
Sbjct: 128 QYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 557 TRNASHQA--TSKSDVYSFGVLLLELLTGKPP-SQH 589
+ A D +S GV+L L+G PP S+H
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
+RL +S+ G S E E+ + + +RHPN++ L F+ K + +LI + G LF +
Sbjct: 62 RRLXSSR-RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL 120
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H R+ H +LK N++L P+ L
Sbjct: 121 AEKES-----LTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKL 174
Query: 530 ADYCLT-ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
D+ + + A + + + APE N ++D++S GV+ LL+G P
Sbjct: 175 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGASP 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 26/272 (9%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE--QHMESVGGLRHPN---LVP 446
LG+GS G Y+ V + + A K + M E + + ++ N +V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-----PLHWTSCLKIAEDVAQGLS 501
L + L+I + G L S + + P + +++A ++A G++
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN-------LLYKA 554
Y++ A + VH +L + N ++ DF + D+ +T D + D + + +
Sbjct: 138 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDE 613
PE+ T+ SDV+SFGV+L E+ T + P Q L +++ +V D D
Sbjct: 194 PESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP-DN 249
Query: 614 RLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
MLLE+ C +P+ RP+ +++ ++E
Sbjct: 250 CPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LGKG+ + V L K ++ KL+ + E+ L+HPN+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSK-STRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
Q + L++D G LF I + + A H C+ + + + ++Y H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CI---QQILESIAYCHSN- 124
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADS-LQDDDPDNLLYKAPETRNASHQ 563
+VH NLK N+LL + LAD+ L DS Y +PE
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD-P 183
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
+ D+++ GV+L LL G PP
Sbjct: 184 YSKPVDIWACGVILYILLVGYPP 206
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI--VCVKRLDASKLA-GTSNEM-----YEQHMESVGGLR 440
++ LG G+ G K + + V +K + K A G++ E E +E + L
Sbjct: 15 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP ++ ++ +F A E+ ++ + G LF + G+K L +C + +
Sbjct: 74 HPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAV 127
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACL---ADYCLTALTAD-SLQDDDPDNLLYKAPE 556
Y+H+ ++H +LK NVLL E CL D+ + + + SL Y APE
Sbjct: 128 QYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 186
Query: 557 TRNASHQA--TSKSDVYSFGVLLLELLTGKPP-SQH 589
+ A D +S GV+L L+G PP S+H
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 151
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 152 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 205
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 206 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 252
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 253 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI--VCVKRLDASKLA-GTSNEM-----YEQHMESVGGLR 440
++ LG G+ G K + + V +K + K A G++ E E +E + L
Sbjct: 14 SKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP ++ ++ +F A E+ ++ + G LF + G+K L +C + +
Sbjct: 73 HPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKR-----LKEATCKLYFYQMLLAV 126
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACL---ADYCLTALTAD-SLQDDDPDNLLYKAPE 556
Y+H+ ++H +LK NVLL E CL D+ + + + SL Y APE
Sbjct: 127 QYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 185
Query: 557 TRNASHQA--TSKSDVYSFGVLLLELLTGKPP-SQH 589
+ A D +S GV+L L+G PP S+H
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L HPN++ L +F+ K L+ + G LF I + I + V
Sbjct: 78 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-----ILRQKFSEVDAAVIMKQVLS 132
Query: 499 GLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTA-LTADSLQDDDPDNLLYKA 554
G +Y+H+ +VH +LK N+LL D + D+ L+A + Y A
Sbjct: 133 GTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 191
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE + K DV+S GV+L LL G PP
Sbjct: 192 PEVLRKKYD--EKCDVWSCGVILYILLCGYPP 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 64/152 (42%), Gaps = 12/152 (7%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L HPN++ L +F+ K L+ + G LF I + I + V
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-----ILRQKFSEVDAAVIMKQVLS 115
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACL---ADYCLTA-LTADSLQDDDPDNLLYKA 554
G +Y+H+ +VH +LK N+LL L D+ L+A + Y A
Sbjct: 116 GTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE + K DV+S GV+L LL G PP
Sbjct: 175 PEVLRKKYD--EKCDVWSCGVILYILLCGYPP 204
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 126/293 (43%), Gaps = 31/293 (10%)
Query: 376 AQLYTLDQLMRASAEL-----LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE 430
A +Y D+ A ++ LG+GS G Y+ V + + A K + M E
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 431 --QHMESVGGLRHPN---LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK--- 482
+ + ++ N +V L + L+I + G L S + +
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 483 --PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
P + +++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRD 181
Query: 541 SLQDDDPDN-------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFL 592
+ D + + +PE+ T+ SDV+SFGV+L E+ T + P Q L
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--L 238
Query: 593 VPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+++ +V D D ML E+ C +P+ RP+ +++ ++E
Sbjct: 239 SNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 459 LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSN 518
LI ++ P+GSL + +K+ ++ LK A + +G+ Y+ + + VH +L + N
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGMDYL-GSRQYVHRDLAARN 144
Query: 519 VLLGPDFEACLADYCLT-ALTAD----SLQDDDPDNLLYKAPETRNASHQATSKSDVYSF 573
VL+ + + + D+ LT A+ D +++DD + + APE S + SDV+SF
Sbjct: 145 VLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA-SDVWSF 203
Query: 574 GVLLLELLT 582
GV L ELLT
Sbjct: 204 GVTLHELLT 212
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 32/297 (10%)
Query: 365 KSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL--DNRLIVCVKRLDASKLA 422
KSG ++ A + L+ E +G+G+ G + L DN L V VK + L
Sbjct: 95 KSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTL-VAVKSCRET-LP 152
Query: 423 GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK 482
+ Q + HPN+V L K+ ++ + G + + T
Sbjct: 153 PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR----TEGA 208
Query: 483 PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL 542
L + L++ D A G+ Y+ +H +L + N L+ ++D+ ++ AD +
Sbjct: 209 RLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 543 QDDDPD----NLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEM 597
+ + APE N + +S+SDV+SFG+LL E + G P PN
Sbjct: 268 XAASGGLRQVPVKWTAPEALNYG-RYSSESDVWSFGILLWETFSLGASP------YPNLS 320
Query: 598 MNWVRSAREDDGAEDERL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647
R E G RL + + C + P QRP+ + + LQ I+
Sbjct: 321 NQQTREFVEKGG----RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LGKG+ + V L K ++ KL+ + E+ L+HPN+V L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSK-STRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
Q + L++D G LF I + + A H C+ + + + ++Y H
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CI---QQILESIAYCHSN- 147
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADS-LQDDDPDNLLYKAPETRNASHQ 563
+VH NLK N+LL + LAD+ L DS Y +PE
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD-P 206
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
+ D+++ GV+L LL G PP
Sbjct: 207 YSKPVDIWACGVILYILLVGYPP 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEM-YEQHMESVGGLRHPNLVP 446
E+LG G + + A D RL V VK L A S + + + ++ L HP +V
Sbjct: 35 EILGFGGMSEVHLA-RDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 93
Query: 447 LRAYFQAKEER----LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ +A+ ++ +Y +L ++H P+ +++ D Q L++
Sbjct: 94 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNF 148
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAPET 557
HQ ++H ++K +N+++ + D+ + ADS + Y +PE
Sbjct: 149 SHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP 586
++SDVYS G +L E+LTG+PP
Sbjct: 208 ARGD-SVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S +++ ++ + L +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVK 75
Query: 447 LR--AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
R +Y ++ L+ +Y P+G L + + RA+ L + L + + +G+ Y+
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRAR-LDASRLLLYSSQICKGMEYL- 130
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL---TADSLQDDDPDN--LLYKAPETRN 559
+ R VH +L + N+L+ + +AD+ L L D +P + + APE+
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL- 189
Query: 560 ASHQATSKSDVYSFGVLLLELLT 582
+ + + +SDV+SFGV+L EL T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 459 LIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSN 518
LI ++ P+GSL + +K+ ++ LK A + +G+ Y+ + + VH +L + N
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGMDYL-GSRQYVHRDLAARN 156
Query: 519 VLLGPDFEACLADYCLT-ALTAD----SLQDDDPDNLLYKAPETRNASHQATSKSDVYSF 573
VL+ + + + D+ LT A+ D +++DD + + APE S + SDV+SF
Sbjct: 157 VLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA-SDVWSF 215
Query: 574 GVLLLELLT 582
GV L ELLT
Sbjct: 216 GVTLHELLT 224
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LGKG+ + V L K ++ KL+ + E+ L+HPN+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSK-STRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
Q + L++D G LF I + + A H C+ + + + ++Y H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CI---QQILESIAYCHSN- 124
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADS-LQDDDPDNLLYKAPETRNASHQ 563
+VH NLK N+LL + LAD+ L DS Y +PE
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD-P 183
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
+ D+++ GV+L LL G PP
Sbjct: 184 YSKPVDIWACGVILYILLVGYPP 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLARVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 118/297 (39%), Gaps = 32/297 (10%)
Query: 365 KSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL--DNRLIVCVKRLDASKLA 422
KSG ++ A + L+ E +G+G+ G + L DN L V VK + L
Sbjct: 95 KSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTL-VAVKSCRET-LP 152
Query: 423 GTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK 482
+ Q + HPN+V L K+ ++ + G + + T
Sbjct: 153 PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR----TEGA 208
Query: 483 PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL 542
L + L++ D A G+ Y+ +H +L + N L+ ++D+ ++ AD +
Sbjct: 209 RLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 543 QDDDPD----NLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEM 597
+ + APE N + +S+SDV+SFG+LL E + G P PN
Sbjct: 268 YAASGGLRQVPVKWTAPEALNYG-RYSSESDVWSFGILLWETFSLGASP------YPNLS 320
Query: 598 MNWVRSAREDDGAEDERL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEIK 647
R E G RL + + C + P QRP+ + + LQ I+
Sbjct: 321 NQQTREFVEKGG----RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S +++ ++ + L +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVK 76
Query: 447 LR--AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
R +Y ++ L+ +Y P+G L + + RA+ L + L + + +G+ Y+
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRAR-LDASRLLLYSSQICKGMEYL- 131
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL---TADSLQDDDPDN--LLYKAPETRN 559
+ R VH +L + N+L+ + +AD+ L L D +P + + APE+
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL- 190
Query: 560 ASHQATSKSDVYSFGVLLLELLT 582
+ + + +SDV+SFGV+L EL T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 392 LGKGSLGTT----YKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
LGKG+ G+ Y + DN +V VK+L S +++ ++ + L +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVK 88
Query: 447 LR--AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
R +Y ++ L+ +Y P+G L + + RA+ L + L + + +G+ Y+
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRAR-LDASRLLLYSSQICKGMEYL- 143
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL---TADSLQDDDPDN--LLYKAPETRN 559
+ R VH +L + N+L+ + +AD+ L L D +P + + APE+ +
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 560 ASHQATSKSDVYSFGVLLLELLT 582
+ + +SDV+SFGV+L EL T
Sbjct: 204 -DNIFSRQSDVWSFGVVLYELFT 225
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+E L Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 121 LREYLQAREPPGLEYSYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 169
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALT--ADSLQDDDPDNLLYK--APET---RN 559
+ +H +L + NVL+ D +AD+ L D + L K APE R
Sbjct: 170 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 229 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 282 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 390 ELLGKGSLGTTYKAVLDNR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LGKG+ + V L K ++ KL+ + E+ L+HPN+V L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSK-STRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
Q + L++D G LF I + + A H C+ + + + ++Y H
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CI---QQILESIAYCHSN- 123
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADS-LQDDDPDNLLYKAPETRNASHQ 563
+VH NLK N+LL + LAD+ L DS Y +PE
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD-P 182
Query: 564 ATSKSDVYSFGVLLLELLTGKPP 586
+ D+++ GV+L LL G PP
Sbjct: 183 YSKPVDIWACGVILYILLVGYPP 205
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEM-YEQHMESVGGLRHPNLVP 446
E+LG G + + A D RL V VK L A S + + + ++ L HP +V
Sbjct: 18 EILGFGGMSEVHLA-RDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 447 LRAYFQAKEER----LLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ +A+ ++ +Y +L ++H P+ +++ D Q L++
Sbjct: 77 VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNF 131
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAPET 557
HQ ++H ++K +N+++ + D+ + ADS + Y +PE
Sbjct: 132 SHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP 586
++SDVYS G +L E+LTG+PP
Sbjct: 191 ARGD-SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 108/243 (44%), Gaps = 19/243 (7%)
Query: 347 QENELQEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLD 406
+EN + + R Q + LV G+ + Y A+ +G+GS G A
Sbjct: 14 RENLYFQSMSRVSHEQFRAALQLVVSPGDPREYL------ANFIKIGEGSTGIVCIATEK 67
Query: 407 NR-LIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
+ V VK++D K E+ + + H N+V + + + +E ++ ++
Sbjct: 68 HTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLE 125
Query: 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
G+L ++ ++ + T CL V + LSY+H ++H ++KS ++LL D
Sbjct: 126 GGALTDIVTHTRMNEEQIA--TVCLS----VLRALSYLHNQG-VIHRDIKSDSILLTSDG 178
Query: 526 EACLADYCLTALTADSLQDDDP--DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTG 583
L+D+ A + + + APE + T + D++S G++++E++ G
Sbjct: 179 RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT-EVDIWSLGIMVIEMIDG 237
Query: 584 KPP 586
+PP
Sbjct: 238 EPP 240
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGLS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLS 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ +Y NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEA-IAYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 25/227 (11%)
Query: 370 VFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL-DNRLIVCVKRLDASKLAGTSNEM 428
VF E + +++RA +GKGS G D + + +K ++ K NE+
Sbjct: 5 VFDENEDVNFDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEV 59
Query: 429 YE--QHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHW 486
+ ++ + GL HP LV L FQ +E+ ++ D G L + + + + +
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL 119
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ--- 543
C ++ L Y+ Q R++H ++K N+LL + D+ + A+ Q
Sbjct: 120 FIC-----ELVMALDYL-QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173
Query: 544 --DDDPDNLLYKAPETRNASHQA--TSKSDVYSFGVLLLELLTGKPP 586
P Y APE ++ A + D +S GV ELL G+ P
Sbjct: 174 MAGTKP----YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 31/293 (10%)
Query: 376 AQLYTLDQLMRASAEL-----LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE 430
A +Y D+ A ++ LG+GS G Y+ V + + A K + M E
Sbjct: 34 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 93
Query: 431 --QHMESVGGLRHPN---LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK--- 482
+ + ++ N +V L + L+I + G L S + +
Sbjct: 94 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 483 --PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
P + +++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRD 209
Query: 541 SLQDD----DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFL 592
+ D LL + +PE+ T+ SDV+SFGV+L E+ T + P Q L
Sbjct: 210 IYETDYYRKGGKGLLPVRWMSPESLKDG-VFTTYSDVWSFGVVLWEIATLAEQPYQG--L 266
Query: 593 VPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+++ +V D D ML E+ C +P+ RP+ +++ ++E
Sbjct: 267 SNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDA--SKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
+LGKG+ G Y L N++ + +K + S+ + +E H L+H N+V
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH----LKHKNIVQY 70
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
F + + P GSL +L+ SK K T + + +GL Y+H
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGF-YTKQILEGLKYLHDN- 127
Query: 508 RLVHGNLKSSNVLLGPDFEACL--ADYCLTALTA--DSLQDDDPDNLLYKAPETRNASHQ 563
++VH ++K NVL+ + L +D+ + A + + L Y APE + +
Sbjct: 128 QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 564 ATSKS-DVYSFGVLLLELLTGKPP 586
K+ D++S G ++E+ TGKPP
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI--VCVKRLDASKLA-GTSNEM-----YEQHMESVGGLR 440
++ LG G+ G K + + V ++ + K A G++ E E +E + L
Sbjct: 154 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 212
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP ++ ++ +F A E+ ++ + G LF + G+K + +C + +
Sbjct: 213 HPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKE-----ATCKLYFYQMLLAV 266
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACL---ADYCLTALTAD-SLQDDDPDNLLYKAPE 556
Y+H+ ++H +LK NVLL E CL D+ + + + SL Y APE
Sbjct: 267 QYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 325
Query: 557 TRNASHQA--TSKSDVYSFGVLLLELLTGKPP-SQH 589
+ A D +S GV+L L+G PP S+H
Sbjct: 326 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI--VCVKRLDASKLA-GTSNEM-----YEQHMESVGGLR 440
++ LG G+ G K + + V ++ + K A G++ E E +E + L
Sbjct: 140 SKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP ++ ++ +F A E+ ++ + G LF + G+K + +C + +
Sbjct: 199 HPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKE-----ATCKLYFYQMLLAV 252
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACL---ADYCLTALTAD-SLQDDDPDNLLYKAPE 556
Y+H+ ++H +LK NVLL E CL D+ + + + SL Y APE
Sbjct: 253 QYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPE 311
Query: 557 TRNASHQA--TSKSDVYSFGVLLLELLTGKPP-SQH 589
+ A D +S GV+L L+G PP S+H
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
AD + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 183 ADEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 31/293 (10%)
Query: 376 AQLYTLDQLMRASAEL-----LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE 430
A +Y D+ A ++ LG+GS G Y+ V + + A K + M E
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 431 --QHMESVGGLRHPN---LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK--- 482
+ + ++ N +V L + L+I + G L S + +
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 483 --PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
P + +++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRD 181
Query: 541 SLQDD----DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFL 592
+ D LL + +PE+ T+ SDV+SFGV+L E+ T + P Q L
Sbjct: 182 IYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--L 238
Query: 593 VPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+++ +V D D ML E+ C +P+ RP+ +++ ++E
Sbjct: 239 SNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L TAD
Sbjct: 126 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 185 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 31/293 (10%)
Query: 376 AQLYTLDQLMRASAEL-----LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE 430
A +Y D+ A ++ LG+GS G Y+ V + + A K + M E
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 64
Query: 431 --QHMESVGGLRHPN---LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK--- 482
+ + ++ N +V L + L+I + G L S + +
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 483 --PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
P + +++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRD 180
Query: 541 SLQDD----DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFL 592
+ D LL + +PE+ T+ SDV+SFGV+L E+ T + P Q L
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--L 237
Query: 593 VPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+++ +V D D ML E+ C +P+ RP+ +++ ++E
Sbjct: 238 SNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
AD + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 183 ADEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 31/263 (11%)
Query: 391 LLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSN-------EMYEQHMESVG-GLRH 441
LLGKG GT + L +RL V +K + +++ G S + + VG G H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 442 PNLVPLRAYFQAKEERLLIYDYQ-PNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
P ++ L +F+ +E +L+ + P LF I T PL V +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI-----TEKGPLGEGPSRCFFGQVVAAI 152
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFE---ACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ H +VH ++K N+L+ D A L D+ AL D D +Y PE
Sbjct: 153 QHCHSR-GVVHRDIKDENILI--DLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEW 209
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ + V+S G+LL +++ G P + + +++ D A R
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRR--- 266
Query: 618 LLEVAIACNSASPEQRPTMWQVL 640
C + P RP++ ++L
Sbjct: 267 -------CLAPKPSSRPSLEEIL 282
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 31/293 (10%)
Query: 376 AQLYTLDQLMRASAEL-----LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE 430
A +Y D+ A ++ LG+GS G Y+ V + + A K + M E
Sbjct: 5 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 64
Query: 431 --QHMESVGGLRHPN---LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK--- 482
+ + ++ N +V L + L+I + G L S + +
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 483 --PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
P + +++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRD 180
Query: 541 SLQDD----DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFL 592
+ D LL + +PE+ T+ SDV+SFGV+L E+ T + P Q L
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--L 237
Query: 593 VPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+++ +V D D ML E+ C +P+ RP+ +++ ++E
Sbjct: 238 SNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 10 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 65
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + + S T PL + ++ QGL+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 121 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDA--SKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
+LGKG+ G Y L N++ + +K + S+ + +E H L+H N+V
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH----LKHKNIVQY 84
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
F + + P GSL +L+ SK K T + + +GL Y+H
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGF-YTKQILEGLKYLHDN- 141
Query: 508 RLVHGNLKSSNVLLGPDFEACL--ADYCLTALTA--DSLQDDDPDNLLYKAPETRNASHQ 563
++VH ++K NVL+ + L +D+ + A + + L Y APE + +
Sbjct: 142 QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 564 ATSKS-DVYSFGVLLLELLTGKPP 586
K+ D++S G ++E+ TGKPP
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPP 224
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 391 LLGKGSLGTTYKA--VLDNRLIVCVK-RLDASKLAGTSNEMY------EQHM--ESVGGL 439
+LG+G+ G KA LD+R K R KL+ +E+ Q++ L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
N V + K + +Y N +L+ LIH + + +W ++ + +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILEA 128
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA---LTADSLQDDD------PDNL 550
LSYIH ++H +LK N+ + + D+ L + D L+ D DNL
Sbjct: 129 LSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 551 -------LYKAPETRNASHQATSKSDVYSFGVLLLELL 581
+Y A E + + K D+YS G++ E++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 61
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + + S T PL + ++ QGL+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 117 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+ L Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 162 LREYLQARRPPGLEYSYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 210
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALT--ADSLQDDDPDNLLYK--APET---RN 559
+ +H +L + NVL+ D +AD+ L D + L K APE R
Sbjct: 211 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 269
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 270 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 322
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 323 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 14 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 69
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 124
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 125 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 31/293 (10%)
Query: 376 AQLYTLDQLMRASAEL-----LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE 430
A +Y D+ A ++ LG+GS G Y+ V + + A K + M E
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 431 --QHMESVGGLRHPN---LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK--- 482
+ + ++ N +V L + L+I + G L S + +
Sbjct: 72 RIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 483 --PLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
P + +++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRD 187
Query: 541 SLQDD----DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFL 592
+ D LL + +PE+ T+ SDV+SFGV+L E+ T + P Q L
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--L 244
Query: 593 VPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+++ +V D D ML E+ C +P+ RP+ +++ ++E
Sbjct: 245 SNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + DY L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDYGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 40/280 (14%)
Query: 392 LGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQ--HMESVGGLRHPN 443
LG G+ G +A D L V VK L ++ A + + M +G +H N
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG--QHEN 103
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTR-----AKPLHWTSCLKIAEDVAQ 498
+V L L+I +Y G L + + +PL L + VAQ
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD---------PDN 549
G++++ +H ++ + NVLL A + D+ L D + D + P
Sbjct: 164 GMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDF---GLARDIMNDSNYIVKGNARLP-- 217
Query: 550 LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG 609
+ + APE+ T +SDV+S+G+LL E+ + LV ++ V+ DG
Sbjct: 218 VKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK-----DG 271
Query: 610 AEDERLGM----LLEVAIACNSASPEQRPTMWQVLKMLQE 645
+ + + + AC + P RPT Q+ LQE
Sbjct: 272 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 153 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADP--DHDHTGFLTEYV 208
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 606 EDD 608
++D
Sbjct: 269 QED 271
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 26/272 (9%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE--QHMESVGGLRHPN---LVP 446
LG+GS G Y+ V + + A K + M E + + ++ N +V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-----PLHWTSCLKIAEDVAQGLS 501
L + L+I + G L S + + P + +++A ++A G++
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD----DPDNLL---YKA 554
Y++ A + VH +L + N ++ DF + D+ +T D + D LL + +
Sbjct: 140 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDE 613
PE+ T+ SDV+SFGV+L E+ T + P Q L +++ +V D D
Sbjct: 196 PESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP-DN 251
Query: 614 RLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
ML E+ C +P+ RP+ +++ ++E
Sbjct: 252 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 19/220 (8%)
Query: 380 TLDQLMRASAELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKL-AGTSNEMYEQHMESVG 437
T+ + MR LGKG Y+ +D + + K + S L E +
Sbjct: 40 TMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 438 GLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVA 497
L +P++V +F+ + ++ + SL L R K +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-----HKRRKAVTEPEARYFMRQTI 152
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL-TALTADSLQDD----DPDNLLY 552
QG+ Y+H R++H +LK N+ L D + + D+ L T + D + P+ Y
Sbjct: 153 QGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPN---Y 208
Query: 553 KAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + D++S G +L LL GKPP + S L
Sbjct: 209 IAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 131 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 186
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 606 EDD 608
++D
Sbjct: 247 QED 249
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 61
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 117 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 9 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 64
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 119
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 120 FCHSH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 8 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 63
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 119 FCHSH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 19/220 (8%)
Query: 380 TLDQLMRASAELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKL-AGTSNEMYEQHMESVG 437
T+ + MR LGKG Y+ +D + + K + S L E +
Sbjct: 40 TMKRYMRG--RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHK 97
Query: 438 GLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVA 497
L +P++V +F+ + ++ + SL L R K +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL-----HKRRKAVTEPEARYFMRQTI 152
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL-TALTADSLQDDD----PDNLLY 552
QG+ Y+H R++H +LK N+ L D + + D+ L T + D + P+ Y
Sbjct: 153 QGVQYLHNN-RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPN---Y 208
Query: 553 KAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + D++S G +L LL GKPP + S L
Sbjct: 209 IAPEVL-CKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 8 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 63
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 119 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 26/272 (9%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE--QHMESVGGLRHPN---LVP 446
LG+GS G Y+ V + + A K + M E + + ++ N +V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-----PLHWTSCLKIAEDVAQGLS 501
L + L+I + G L S + + P + +++A ++A G++
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD----DPDNLL---YKA 554
Y++ A + VH +L + N ++ DF + D+ +T D + D LL + +
Sbjct: 144 YLN-ANKFVHRDLAARNCMVAEDFTVKIGDF---GMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDE 613
PE+ T+ SDV+SFGV+L E+ T + P Q L +++ +V D D
Sbjct: 200 PESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP-DN 255
Query: 614 RLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
ML E+ C +P+ RP+ +++ ++E
Sbjct: 256 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 61
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 117 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 9 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 64
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 119
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 120 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 61
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 117 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 6 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 61
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 117 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 14 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 69
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 124
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 125 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 8 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 63
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 119 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 10 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 65
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 121 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADSLQDDDPDN 549
KIA + + L ++H ++H ++K SNVL+ + + D+ ++ L D +D D
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGC 172
Query: 550 LLYKAPETRNAS---HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE 606
Y APE N + KSD++S G+ ++EL + P S+ P + + V
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-SWGTPFQQLKQVVEEPS 231
Query: 607 DDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK----MLQEIKGA 649
D+ ++ C + ++RPT ++++ L E KG
Sbjct: 232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 278
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 10 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 65
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 121 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 9 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 64
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 119
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 120 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 11 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 66
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 121
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H + R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 122 FCH-SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 11 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 66
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 121
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 122 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+G HPN++ L + ++I +Y NGSL + + + R + L+
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLR---G 124
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
+ G+ Y+ VH +L + N+L+ + ++D+ ++ + +DDP+
Sbjct: 125 IGSGMKYLSDM-SYVHRDLAARNILVNSNLVCKVSDFGMSRVL-----EDDPEAAYTTRG 178
Query: 550 ----LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ + APE A + TS SDV+S+G+++ E+++ G+ P
Sbjct: 179 GKIPIRWTAPEA-IAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 8 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 63
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 119 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 442 PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
P LV L FQ + + LI DY G LF+ + S R + + + E + L
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQRERFTEHEVQIYVGE-IVLALE 173
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADSLQD--DDPDNLLYKAPETR 558
++H+ +++ ++K N+LL + L D+ L+ AD + D + Y AP+
Sbjct: 174 HLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 559 NASHQATSKS-DVYSFGVLLLELLTGKPP 586
K+ D +S GVL+ ELLTG P
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 137 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADP--DHDHTGFLTEYV 192
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 606 EDD 608
++D
Sbjct: 253 QED 255
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 137 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADP--DHDHTGFLTEYV 192
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 606 EDD 608
++D
Sbjct: 253 QED 255
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 7 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 62
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 118 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 26/209 (12%)
Query: 390 ELLGKGSLGTT----YKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV--GGLRHPN 443
+++GKGS G +KA + VK L + E + +V ++HP
Sbjct: 44 KVIGKGSFGKVLLARHKA---EEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSK---STRAKPLHWTSCLKIAEDVAQGL 500
LV L FQ ++ + DY G LF + + RA+ A ++A L
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRAR--------FYAAEIASAL 152
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPETR 558
Y+H + +V+ +LK N+LL L D+ C + +S Y APE
Sbjct: 153 GYLH-SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 559 NASHQATSKS-DVYSFGVLLLELLTGKPP 586
+ Q ++ D + G +L E+L G PP
Sbjct: 212 HK--QPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 133 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADP--DHDHTGFLTEYV 188
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 606 EDD 608
++D
Sbjct: 249 QED 251
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+G HPN++ L + ++I +Y NGSL + + + R + L+
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLR---G 118
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
+ G+ Y+ VH +L + N+L+ + ++D+ ++ + +DDP+
Sbjct: 119 IGSGMKYLSDM-SYVHRDLAARNILVNSNLVCKVSDFGMSRVL-----EDDPEAAYTTRG 172
Query: 550 ----LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ + APE A + TS SDV+S+G+++ E+++ G+ P
Sbjct: 173 GKIPIRWTAPEA-IAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 10 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 65
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 121 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 133 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTXDLKICDFGL-ARVADP--DHDHTGFLTEYV 188
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 606 EDD 608
++D
Sbjct: 249 QED 251
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+ L Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 113 LREYLQARRPPGLEYSYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 161
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALT--ADSLQDDDPDNLLYK--APET---RN 559
+ +H +L + NVL+ D +AD+ L D + L K APE R
Sbjct: 162 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 220
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 221 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 273
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 274 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 133 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTXDLKIXDFGL-ARVADP--DHDHTGFLTEYV 188
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 606 EDD 608
++D
Sbjct: 249 QED 251
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+ L Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 114 LREYLQARRPPGLEYSYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 162
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALT--ADSLQDDDPDNLLYK--APET---RN 559
+ +H +L + NVL+ D +AD+ L D + L K APE R
Sbjct: 163 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 221
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 222 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 274
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 275 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 26/272 (9%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYE--QHMESVGGLRHPN---LVP 446
LG+GS G Y+ V + + A K + M E + + ++ N +V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-----PLHWTSCLKIAEDVAQGLS 501
L + L+I + G L S + + P + +++A ++A G++
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD----DPDNLL---YKA 554
Y++ A + VH +L + N + DF + D+ +T D + D LL + +
Sbjct: 140 YLN-ANKFVHRDLAARNCXVAEDFTVKIGDF---GMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAEDE 613
PE+ T+ SDV+SFGV+L E+ T + P Q L +++ +V D D
Sbjct: 196 PESLK-DGVFTTYSDVWSFGVVLWEIATLAEQPYQG--LSNEQVLRFVMEGGLLDKP-DN 251
Query: 614 RLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
MLLE+ C +P+ RP+ +++ ++E
Sbjct: 252 CPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 8 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 63
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 119 FCHSH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 153 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 208
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 606 EDD 608
++D
Sbjct: 269 QED 271
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 10 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 65
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 121 FCHSH-RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 137 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 192
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 606 EDD 608
++D
Sbjct: 253 QED 255
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE + D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATRW-YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 137 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLXEXV 192
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 606 EDD 608
++D
Sbjct: 253 QED 255
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+ L Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 121 LREYLQARRPPGLEYSYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 169
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALT--ADSLQDDDPDNLLYK--APET---RN 559
+ +H +L + NVL+ D +AD+ L D + L K APE R
Sbjct: 170 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 229 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 282 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 138 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLXEXV 193
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 606 EDD 608
++D
Sbjct: 254 QED 256
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 382 DQLMRASAELLGKGSLGTTYKAVLDNR---LIVCVKRLDASKLAGTSNEMYEQHMESVGG 438
D L+ A EL G G+ G+ + V R + V +K L + EM + + +
Sbjct: 9 DNLLIADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE-AQIMHQ 66
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V L QA E +L+ + G L + G + + ++ ++ V+
Sbjct: 67 LDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVSM 121
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTAD----SLQDDDPDNLLYK 553
G+ Y+ + VH +L + NVLL A ++D+ L+ AL AD + + L +
Sbjct: 122 GMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N + +S+SDV+S+GV + E L+ G+ P +
Sbjct: 181 APECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---- 545
+++A ++A G++Y++ A + VH NL + N ++ DF + D+ +T D + D
Sbjct: 134 IQMAAEIADGMAYLN-AKKFVHRNLAARNCMVAHDFTVKIGDF---GMTRDIYETDYYRK 189
Query: 546 DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV 601
LL + APE+ TS SD++SFGV+L E+ + + P Q L +++ +V
Sbjct: 190 GGKGLLPVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFV 246
Query: 602 RSAREDDGAED--ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
D ++ ER+ L+ + C +P RPT +++ +L++
Sbjct: 247 MDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 289
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEER--LLIYDYQPNGSLFSLIHGSKSTRAKPLHW 486
+++ +E + L H ++V + + + E+ L+ +Y P GSL + P H
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHC 107
Query: 487 TSCLKI---AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-- 541
++ A+ + +G++Y+H A +H L + NVLL D + D+ L +
Sbjct: 108 VGLAQLLLFAQQICEGMAYLH-AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE 166
Query: 542 ---LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT 582
+++D + + APE + SDV+SFGV L ELLT
Sbjct: 167 YYRVREDGDSPVFWYAPECLKEC-KFYYASDVWSFGVTLYELLT 209
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 135 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 190
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 606 EDD 608
++D
Sbjct: 251 QED 253
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+G HPN++ L + ++I +Y NGSL + + + R + L+
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG-RFTVIQLVGMLR---G 139
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
+ G+ Y+ VH +L + N+L+ + ++D+ ++ + +DDP+
Sbjct: 140 IGSGMKYLSDM-SAVHRDLAARNILVNSNLVCKVSDFGMSRVL-----EDDPEAAYTTRG 193
Query: 550 ----LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ + APE A + TS SDV+S+G+++ E+++ G+ P
Sbjct: 194 GKIPIRWTAPEA-IAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 19/238 (7%)
Query: 352 QEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKA-VLDNRLI 410
Q + +R Q + LV G+ + Y LD ++ +G+GS G A V + +
Sbjct: 3 QREPQRVSHEQFRAALQLVVDPGDPRSY-LDNFIK-----IGEGSTGIVCIATVRSSGKL 56
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK++D K E+ + + +H N+V + + +E ++ ++ G+L
Sbjct: 57 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 114
Query: 471 SLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLA 530
++ ++ + CL V Q LS +H A ++H ++KS ++LL D L+
Sbjct: 115 DIVTHTRMNEEQIA--AVCLA----VLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLS 167
Query: 531 DYCLTALTADSLQDDDP--DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
D+ A + + + APE + + D++S G++++E++ G+PP
Sbjct: 168 DFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 10 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 65
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 121 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 388 SAELLGKGSLGTTYKAVLDNRL---IVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHP 442
E +G+G+ G YKA N+L +V +K RLD S + E + + L HP
Sbjct: 9 KVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIRE--ISLLKELNHP 64
Query: 443 NLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLS 501
N+V L + + L++++ + L + S T PL + ++ QGL+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLA 119
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRN 559
+ H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 120 FCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 560 ASHQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+G HPN++ L +++ +Y NGSL + + T + +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR----THDGQFTIMQLVGMLRG 159
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
V G+ Y+ VH +L + NVL+ + ++D+ L+ + +DDPD
Sbjct: 160 VGAGMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-----EDDPDAAXTTTG 213
Query: 550 ----LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ + APE A +S SDV+SFGV++ E+L G+ P
Sbjct: 214 GKIPIRWTAPEA-IAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 131 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 186
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 606 EDD 608
++D
Sbjct: 247 QED 249
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---- 545
+++A ++A G++Y++ A + VH NL + N ++ DF + D+ +T D + D
Sbjct: 133 IQMAAEIADGMAYLN-AKKFVHRNLAARNCMVAHDFTVKIGDF---GMTRDIYETDYYRK 188
Query: 546 DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV 601
LL + APE+ TS SD++SFGV+L E+ + + P Q L +++ +V
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFV 245
Query: 602 RSAREDDGAED--ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
D ++ ER+ L+ + C +P RPT +++ +L++
Sbjct: 246 MDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 137 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 192
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 606 EDD 608
++D
Sbjct: 253 QED 255
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEER--LLIYDYQPNGSLFSLIHGSKSTRAKPLHW 486
+++ +E + L H ++V + + + E+ L+ +Y P GSL + P H
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHC 108
Query: 487 TSCLKI---AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-- 541
++ A+ + +G++Y+H A +H L + NVLL D + D+ L +
Sbjct: 109 VGLAQLLLFAQQICEGMAYLH-AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE 167
Query: 542 ---LQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT 582
+++D + + APE + SDV+SFGV L ELLT
Sbjct: 168 YYRVREDGDSPVFWYAPECLKEC-KFYYASDVWSFGVTLYELLT 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 30/274 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQ-----HMESVGGLRHPNLVP 446
LG+GS G Y+ + + + A K S + E+ + G ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLI-----HGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
L + L++ + +G L S + + P +++A ++A G++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN-------LLYKA 554
Y++ A + VH +L + N ++ DF + D+ +T D + D + + A
Sbjct: 145 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDF---GMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED- 612
PE+ TS SD++SFGV+L E+ + + P Q L +++ +V D ++
Sbjct: 201 PESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNC 257
Query: 613 -ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
ER+ L+ + C +P+ RPT +++ +L++
Sbjct: 258 PERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 133 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 188
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 606 EDD 608
++D
Sbjct: 249 QED 251
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 138 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 193
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 606 EDD 608
++D
Sbjct: 254 QED 256
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 135 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 190
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 606 EDD 608
++D
Sbjct: 251 QED 253
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 139 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 194
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 606 EDD 608
++D
Sbjct: 255 QED 257
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 130 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 185
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 606 EDD 608
++D
Sbjct: 246 QED 248
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 19/238 (7%)
Query: 352 QEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKA-VLDNRLI 410
Q + +R Q + LV G+ + Y LD ++ +G+GS G A V + +
Sbjct: 5 QREPQRVSHEQFRAALQLVVDPGDPRSY-LDNFIK-----IGEGSTGIVCIATVRSSGKL 58
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK++D K E+ + + +H N+V + + +E ++ ++ G+L
Sbjct: 59 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 471 SLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLA 530
++ ++ + CL V Q LS +H A ++H ++KS ++LL D L+
Sbjct: 117 DIVTHTRMNEEQIA--AVCLA----VLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLS 169
Query: 531 DYCLTALTADSLQDDDP--DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
D+ A + + + APE + + D++S G++++E++ G+PP
Sbjct: 170 DFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 137 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 192
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 606 EDD 608
++D
Sbjct: 253 QED 255
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 141 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 196
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 606 EDD 608
++D
Sbjct: 257 QED 259
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 133 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGL-ARVADP--DHDHTGFLTEYV 188
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 606 EDD 608
++D
Sbjct: 249 QED 251
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+ L Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 110 LREYLQARRPPGLEYSYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 158
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALT--ADSLQDDDPDNLLYK--APET---RN 559
+ +H +L + NVL+ D +AD+ L D + L K APE R
Sbjct: 159 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 217
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 218 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 270
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 271 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ + NGSL S + H ++ T + + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ------LVGML 124
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 125 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 178
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 179 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 225
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 226 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 382 DQLMRASAELLGKGSLGTTYKAVLDNR---LIVCVKRLDASKLAGTSNEMYEQHMESVGG 438
D L+ A EL G G+ G+ + V R + V +K L + EM + + +
Sbjct: 335 DNLLIADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE-AQIMHQ 392
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V L QA E +L+ + G L + G + + ++ ++ V+
Sbjct: 393 LDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVSM 447
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTAD----SLQDDDPDNLLYK 553
G+ Y+ + VH NL + NVLL A ++D+ L+ AL AD + + L +
Sbjct: 448 GMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N + +S+SDV+S+GV + E L+ G+ P +
Sbjct: 507 APECINF-RKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 411 VCVKRLDASKLAGTSNEMY-----EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
V V+R++ L SNEM E H+ + HPN+VP RA F A E ++ +
Sbjct: 55 VTVRRIN---LEACSNEMVTFLQGELHVSKL--FNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
GS LI + ++ + I + V + L YIH VH ++K+S++L+ D
Sbjct: 110 YGSAKDLI---CTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDG 165
Query: 526 EACLADY--CLTALTADSLQ---DDDPDN----LLYKAPETRNASHQA-TSKSDVYSFGV 575
+ L+ L+ ++ Q D P L + +PE + Q +KSD+YS G+
Sbjct: 166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 225
Query: 576 LLLELLTGKPP 586
EL G P
Sbjct: 226 TACELANGHVP 236
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 388 SAELLGKGSLGTTYKA--VLDNRLIVCVK-RLDASKLAGTSNEMYEQHMESVGGLRHPNL 444
E +G+G+ G YKA L ++ K RLD S + E + + L HPN+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE--ISLLKELNHPNI 64
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLSYI 503
V L + + L++++ + L + S T PL + ++ QGL++
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFC 119
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNAS 561
H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 120 HSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 562 HQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 388 SAELLGKGSLGTTYKA--VLDNRLIVCVK-RLDASKLAGTSNEMYEQHMESVGGLRHPNL 444
E +G+G+ G YKA L ++ K RLD S + E + + L HPN+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE--ISLLKELNHPNI 63
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK-PLHWTSCLKIAEDVAQGLSYI 503
V L + + L++++ + L + S T PL + ++ QGL++
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFC 118
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNAS 561
H R++H +LK N+L+ + LAD+ L ++ + L Y+APE
Sbjct: 119 HSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 562 HQATSKSDVYSFGVLLLELLTGK 584
++ D++S G + E++T +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 196 DDEMXGXVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+G HPN++ L +++ +Y NGSL + + T + +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR----THDGQFTIMQLVGMLRG 159
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
V G+ Y+ VH +L + NVL+ + ++D+ L+ + +DDPD
Sbjct: 160 VGAGMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-----EDDPDAAYTTTG 213
Query: 550 ----LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ + APE A +S SDV+SFGV++ E+L G+ P
Sbjct: 214 GKIPIRWTAPEA-IAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+ +GL YIH A ++H +LK SN+LL + + D+ L A AD D D L
Sbjct: 135 ILRGLKYIHSA-NVLHRDLKPSNLLLNTTSDLKICDFGL-ARVADP--DHDHTGFLTEYV 190
Query: 552 ----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSAR 605
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 606 EDD 608
++D
Sbjct: 251 QED 253
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 30/274 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQ-----HMESVGGLRHPNLVP 446
LG+GS G Y+ + + + A K S + E+ + G ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLI-----HGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
L + L++ + +G L S + + P +++A ++A G++
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN-------LLYKA 554
Y++ A + VH +L + N ++ DF + D+ +T D + D + + A
Sbjct: 142 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDF---GMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED- 612
PE+ TS SD++SFGV+L E+ + + P Q L +++ +V D ++
Sbjct: 198 PESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNC 254
Query: 613 -ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
ER+ L+ + C +P+ RPT +++ +L++
Sbjct: 255 PERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 285
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDXELKILDFGLARHT 186
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 187 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDXELKILDFGLARHT 180
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 181 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGXVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 411 VCVKRLDASKLAGTSNEMY-----EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
V V+R++ L SNEM E H+ + HPN+VP RA F A E ++ +
Sbjct: 39 VTVRRIN---LEACSNEMVTFLQGELHVSKL--FNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
GS LI + ++ + I + V + L YIH VH ++K+S++L+ D
Sbjct: 94 YGSAKDLI---CTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDG 149
Query: 526 EACLADY--CLTALTADSLQ---DDDPDN----LLYKAPETRNASHQA-TSKSDVYSFGV 575
+ L+ L+ ++ Q D P L + +PE + Q +KSD+YS G+
Sbjct: 150 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 209
Query: 576 LLLELLTGKPP 586
EL G P
Sbjct: 210 TACELANGHVP 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 40/280 (14%)
Query: 392 LGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQ--HMESVGGLRHPN 443
LG G+ G +A D L V VK L ++ A + + M +G +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG--QHEN 111
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTR-----AKPLHWTSCLKIAEDVAQ 498
+V L L+I +Y G L + + +PL L + VAQ
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD---------PDN 549
G++++ +H ++ + NVLL A + D+ L D + D + P
Sbjct: 172 GMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDF---GLARDIMNDSNYIVKGNARLP-- 225
Query: 550 LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDG 609
+ + APE+ T +SDV+S+G+LL E+ + LV ++ V+ DG
Sbjct: 226 VKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK-----DG 279
Query: 610 AEDERLGM----LLEVAIACNSASPEQRPTMWQVLKMLQE 645
+ + + + AC + P RPT Q+ LQE
Sbjct: 280 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 26/170 (15%)
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY-QPNGSLF---SLIHG----SKSTRA 481
++ + G L+ P++VP I+D+ + +G L+ LI+G + R
Sbjct: 82 QREARTAGRLQEPHVVP-------------IHDFGEIDGQLYVDXRLINGVDLAAXLRRQ 128
Query: 482 KPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD- 540
PL + I + A H ++K N+L+ D A L D+ + + T D
Sbjct: 129 GPLAPPRAVAIVRQIGS-ALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187
Query: 541 --SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQ 588
+ + L Y APE + SH AT ++D+Y+ +L E LTG PP Q
Sbjct: 188 KLTQLGNTVGTLYYXAPERFSESH-ATYRADIYALTCVLYECLTGSPPYQ 236
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDXELKILDFGLARHT 180
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 181 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 32/218 (14%)
Query: 391 LLGKGSLGTTYKA--VLDNRLIVCVK-RLDASKLAGTSNEMY------EQHM--ESVGGL 439
+LG+G+ G KA LD+R K R KL+ +E+ Q++ L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
N V + K + +Y N +L+ LIH + + +W ++ + +
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILEA 128
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA---LTADSLQDD------DPDNL 550
LSYIH ++H NLK N+ + + D+ L + D L+ D DNL
Sbjct: 129 LSYIHSQG-IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 551 -------LYKAPETRNASHQATSKSDVYSFGVLLLELL 581
Y A E + + K D YS G++ E +
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS TT VL L +K L+ + + Y + + + L HP
Sbjct: 35 GKILGEGSFSTT---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 145
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 146 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 205 TEK-SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 392 LGKGSLGTTYKAVLD-----NRLIVCVKRLDASKLAGTSNEM-YEQHMESVGGLRHPNLV 445
LG+G G D +V VK L A AG + ++Q ++ + L H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHII 96
Query: 446 PLRAYFQ--AKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLH---WTSCLKIAEDVAQGL 500
+ + L+ +Y P GSL + P H L A+ + +G+
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYL---------PRHSIGLAQLLLFAQQICEGM 147
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-----LQDDDPDNLLYKAP 555
+Y+H A +H +L + NVLL D + D+ L + +++D + + AP
Sbjct: 148 AYLH-AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAP 206
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPPSQ 588
E ++ SDV+SFGV L ELLT SQ
Sbjct: 207 ECLK-EYKFYYASDVWSFGVTLYELLTHCDSSQ 238
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFYLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 108/238 (45%), Gaps = 19/238 (7%)
Query: 352 QEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKA-VLDNRLI 410
Q + +R Q + LV G+ + Y LD ++ +G+GS G A V + +
Sbjct: 48 QREPQRVSHEQFRAALQLVVDPGDPRSY-LDNFIK-----IGEGSTGIVCIATVRSSGKL 101
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK++D K E+ + + +H N+V + + +E ++ ++ G+L
Sbjct: 102 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159
Query: 471 SLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLA 530
++ ++ ++ + V Q LS +H A ++H ++KS ++LL D L+
Sbjct: 160 DIVTHTR------MNEEQIAAVCLAVLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLS 212
Query: 531 DYCLTALTADSLQDDDP--DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
D+ A + + + APE + + D++S G++++E++ G+PP
Sbjct: 213 DFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 26/162 (16%)
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP+++ L +++ L++D G LF + T L I + + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-----TEKVALSEKETRSIMRSLLEAV 213
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL--------Y 552
S++H A +VH +LK N+LL + + L+D+ + +P L Y
Sbjct: 214 SFLH-ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL-------EPGEKLRELCGTPGY 265
Query: 553 KAPETRNASHQAT-----SKSDVYSFGVLLLELLTGKPPSQH 589
APE S T + D+++ GV+L LL G PP H
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 140 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 198
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 199 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 113 VKCAKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 172 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD------DDPDN 549
+ +GL YIH A ++H +LK SN+L+ + + D+ L A AD D +
Sbjct: 153 ILRGLKYIHSA-NVLHRDLKPSNLLINTTCDLKICDFGL-ARIADPEHDHTGFLTEXVAT 210
Query: 550 LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP--PSQHSFLVPNEMMNWVRSARED 607
Y+APE S T D++S G +L E+L+ +P P +H N ++ + S ++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 608 D 608
D
Sbjct: 271 D 271
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 186
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 187 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 196 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 20/185 (10%)
Query: 410 IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSL 469
+V +K +D + L G+ + +E++ LRH ++ L + + ++ +Y P G L
Sbjct: 37 MVAIKIMDKNTL-GSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL 95
Query: 470 FSLIHG-----SKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPD 524
F I + TR + + ++Y+H H +LK N+L
Sbjct: 96 FDYIISQDRLSEEETRV----------VFRQIVSAVAYVHSQ-GYAHRDLKPENLLFDEY 144
Query: 525 FEACLADYCLTAL---TADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELL 581
+ L D+ L A D +L Y APE S++DV+S G+LL L+
Sbjct: 145 HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLM 204
Query: 582 TGKPP 586
G P
Sbjct: 205 CGFLP 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+G HPN++ L ++I ++ NGSL S + + + +
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVIQLVGMLRG 143
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+A G+ Y+ VH +L + N+L+ + ++D+ L+ D D + L
Sbjct: 144 IAAGMKYLADM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 202
Query: 552 ---YKAPETRNASHQATSKSDVYSFGVLLLELLT 582
+ APE + TS SDV+S+G+++ E+++
Sbjct: 203 PIRWTAPEAIQY-RKFTSASDVWSYGIVMWEVMS 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ + NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQ-----HMESVGGLRHPNLVP 446
LG+GS G Y+ + + + A K S + E+ + G ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLI-----HGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
L + L++ + +G L S + + P +++A ++A G++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN-------LLYKA 554
Y++ A + VH +L + N ++ DF + D+ +T D + D + + A
Sbjct: 145 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDF---GMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED- 612
PE+ TS SD++SFGV+L E+ + + P Q L +++ +V D ++
Sbjct: 201 PESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNC 257
Query: 613 -ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
ER+ L+ + C +P RPT +++ +L++
Sbjct: 258 PERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 190 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 190 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 9/167 (5%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD-DPDN 549
KIA + + L ++H ++H ++K SNVL+ + + D+ ++ DS+ D
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGC 216
Query: 550 LLYKAPETRNAS---HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE 606
Y APE N + KSD++S G+ ++EL + P S+ P + + V
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-SWGTPFQQLKQVVEEPS 275
Query: 607 DDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK----MLQEIKGA 649
D+ ++ C + ++RPT ++++ L E KG
Sbjct: 276 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 322
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 115 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 173
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 174 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 137 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 195
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 196 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 190 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 142 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 201 EMXGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 119 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 178 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 180 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V + +A E +L+ + G L + ++ + K + +++ V+
Sbjct: 63 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 116
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQDDDPDNLLYK 553
G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q + +
Sbjct: 117 GMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N ++ +SKSDV+SFGVL+ E + G+ P +
Sbjct: 176 APECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYR 210
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 172 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 172
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 173 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 182 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 180
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 181 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 47/233 (20%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN++ L + +++ + NGSL S + H ++ T + + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ------LVGML 153
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---- 549
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 154 RGIASGMKYLSDM-GAVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTT 207
Query: 550 ------LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVR 602
+ + +PE A + TS SDV+S+G++L E+++ G+ P W
Sbjct: 208 RGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVMSYGERPY------------WEM 254
Query: 603 SAREDDGAEDE--RL-------GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
S ++ A DE RL L ++ + C RP Q++ +L ++
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDSELKILDFGLARHTDD 179
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 180 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 136 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 194
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 195 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 121/271 (44%), Gaps = 24/271 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQ-----HMESVGGLRHPNLVP 446
LG+GS G Y+ + + + A K S + E+ + G ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLI-----HGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
L + L++ + +G L S + + P +++A ++A G++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADSLQDDDPDNLL---YKAPET 557
Y++ A + VH +L + N ++ DF + D+ +T + + LL + APE+
Sbjct: 145 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPES 203
Query: 558 RNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ER 614
TS SD++SFGV+L E+ + + P Q L +++ +V D ++ ER
Sbjct: 204 LKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNCPER 260
Query: 615 LGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
+ L+ + C +P+ RPT +++ +L++
Sbjct: 261 VTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 172
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 173 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 183 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 180
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 181 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V + +A E +L+ + G L + ++ + K + +++ V+
Sbjct: 65 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSM 118
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQDDDPDNLLYK 553
G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q + +
Sbjct: 119 GMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N ++ +SKSDV+SFGVL+ E + G+ P +
Sbjct: 178 APECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYR 212
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 116 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 174
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 175 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---- 545
+++A ++A G++Y++ A + VH +L + N ++ DF + D+ +T D + D
Sbjct: 132 IQMAAEIADGMAYLN-AKKFVHRDLAARNCMVAHDFTVKIGDF---GMTRDIYETDYYRK 187
Query: 546 DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV 601
LL + APE+ TS SD++SFGV+L E+ + + P Q L +++ +V
Sbjct: 188 GGKGLLPVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFV 244
Query: 602 RSAREDDGAED--ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
D ++ ER+ L+ + C +P+ RPT +++ +L++
Sbjct: 245 MDGGYLDQPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 287
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 136 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 194
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 195 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 121 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 180 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 172 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V + +A E +L+ + G L + ++ + K + +++ V+
Sbjct: 75 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSM 128
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQDDDPDNLLYK 553
G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q + +
Sbjct: 129 GMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N ++ +SKSDV+SFGVL+ E + G+ P +
Sbjct: 188 APECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 125 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDSELKILDFGLARHTDD 183
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
+ Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 184 EMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 127/310 (40%), Gaps = 31/310 (10%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------N 407
R I + N F + + L ++ R + L LG G+ G Y+ + +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 408 RLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
L V VK L ++ +E+ + ME+ + L H N+V R ++ +
Sbjct: 61 PLQVAVKTL--PEVCSEQDEL-DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 466 NGSLFSLIHGSKSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL-- 521
G L S + ++ ++P L L +A D+A G Y+ + +H ++ + N LL
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 176
Query: 522 -GPDFEACLADYCLT--ALTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLL 577
GP A + D+ + A + L K P TSK+D +SFGVLL
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 578 LELLT---GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRP 634
E+ + PS+ + E++ +V S D ++ G + + C PE RP
Sbjct: 237 WEIFSLGYMPYPSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRP 291
Query: 635 TMWQVLKMLQ 644
+L+ ++
Sbjct: 292 NFAIILERIE 301
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 177
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 178 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+ L Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 106 LREYLQARRPPGLEYCYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 154
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALT--ADSLQDDDPDNLLYK--APET---RN 559
+ +H +L + NVL+ D +AD+ L D + L K APE R
Sbjct: 155 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 213
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 214 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 266
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 267 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 127 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 185
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 186 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 391 LLGKGSLGTTYKAVLDNRL----IVCVKRLDASKLAGTSN---EMYEQHMESVGGLRHPN 443
+LGKGS G K +L R + VK L + + M E+ + ++ G + P
Sbjct: 27 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPF 82
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L L + FQ + + +Y G L + H + R K H + A ++A GL ++
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPH---AVFYAAEIAIGLFFL 137
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD--------DPDNLLYKAP 555
Q+ +++ +LK NV+L + +AD+ + +++ D PD Y AP
Sbjct: 138 -QSKGIIYRDLKLDNVMLDSEGHIKIADF---GMCKENIWDGVTTKXFCGTPD---YIAP 190
Query: 556 ETRNASHQATSKS-DVYSFGVLLLELLTGKPPSQ 588
E ++Q KS D ++FGVLL E+L G+ P +
Sbjct: 191 EI--IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 108/238 (45%), Gaps = 19/238 (7%)
Query: 352 QEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKA-VLDNRLI 410
Q + +R Q + LV G+ + Y LD ++ +G+GS G A V + +
Sbjct: 125 QREPQRVSHEQFRAALQLVVDPGDPRSY-LDNFIK-----IGEGSTGIVCIATVRSSGKL 178
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLF 470
V VK++D K E+ + + +H N+V + + +E ++ ++ G+L
Sbjct: 179 VAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236
Query: 471 SLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLA 530
++ ++ ++ + V Q LS +H A ++H ++KS ++LL D L+
Sbjct: 237 DIVTHTR------MNEEQIAAVCLAVLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLS 289
Query: 531 DYCLTALTADSLQDDDP--DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
D+ A + + + APE + + D++S G++++E++ G+PP
Sbjct: 290 DFGFCAQVSKEVPRRKXLVGTPYWMAPEL-ISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+G HPN++ L + +++ +Y NGSL + + + + +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ----FTVIQLVGMLRG 132
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
++ G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+
Sbjct: 133 ISAGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLSRVL-----EDDPEAAYTTRG 186
Query: 550 ----LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ + APE A + TS SDV+S+G+++ E+++ G+ P
Sbjct: 187 GKIPIRWTAPEA-IAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
D + Y+APE D++S G ++ ELLTG+
Sbjct: 182 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V + +A E +L+ + G L + ++ + K + +++ V+
Sbjct: 69 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSM 122
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQDDDPDNLLYK 553
G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q + +
Sbjct: 123 GMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N ++ +SKSDV+SFGVL+ E + G+ P +
Sbjct: 182 APECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + V +K + K S + + + + + L H LV L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ +I +Y NG L + + + R + L++ +DV + + Y+ + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESK-QFLH 143
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---LLYKAPETRNASHQATSKS 568
+L + N L+ ++D+ L+ D + + + + PE S + +SKS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYS-KFSSKS 202
Query: 569 DVYSFGVLLLELLT-GKPPSQ 588
D+++FGVL+ E+ + GK P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 30/274 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQ-----HMESVGGLRHPNLVP 446
LG+GS G Y+ + + + A K S + E+ + G ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLI-----HGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
L + L++ + +G L S + + P +++A ++A G++
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD----DPDNLL---YKA 554
Y++ A + VH +L + N ++ DF + D+ +T D + D LL + A
Sbjct: 145 YLN-AKKFVHRDLAARNCMVAHDFTVKIGDF---GMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED- 612
PE+ TS SD++SFGV+L E+ + + P Q L +++ +V D ++
Sbjct: 201 PESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQG--LSNEQVLKFVMDGGYLDQPDNC 257
Query: 613 -ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
ER+ L+ + C +P+ RPT +++ +L++
Sbjct: 258 PERVTDLMRM---CWQFNPKMRPTFLEIVNLLKD 288
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 411 VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE--ERLLIYDYQPNGS 468
+ VK L + + + + + HPN++P+ Q+ LI + P GS
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS 95
Query: 469 LFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGN-LKSSNVLLGPDFEA 527
L++++H + + +K A D+A+G++++H L+ + L S +V++ D A
Sbjct: 96 LYNVLHEGTNFVVDQ---SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA 152
Query: 528 --CLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK--SDVYSFGVLLLELLTG 583
+AD + + + + APE + T++ +D++SF VLL EL+T
Sbjct: 153 RISMADVKFSFQSPGRMYAP-----AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR 207
Query: 584 KPP 586
+ P
Sbjct: 208 EVP 210
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMAGFVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V + +A E +L+ + G L + ++ + K + +++ V+
Sbjct: 69 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSM 122
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQDDDPDNLLYK 553
G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q + +
Sbjct: 123 GMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N ++ +SKSDV+SFGVL+ E + G+ P +
Sbjct: 182 APECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+ L Y Y P+ + + +K L SC A VA+G+ Y+
Sbjct: 121 LREYLQARRPPGLEYCYNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 169
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALT--ADSLQDDDPDNLLYK--APET---RN 559
+ +H +L + NVL+ D +AD+ L D + L K APE R
Sbjct: 170 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 229 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 282 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMAGFVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 181
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
D + Y+APE D++S G ++ ELLTG+
Sbjct: 182 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 102/261 (39%), Gaps = 49/261 (18%)
Query: 352 QEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASA--------ELLGKGSLGTTYKA 403
Q K+ R +G + N VF + Q Y ++ E LG G+ G ++
Sbjct: 12 QGKIVRGKGTVSSNYDNYVFDIWK-QYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHR- 69
Query: 404 VLDNRLIVCVKRLDASKLAG--------TSNEMYEQHMESVGGLRHPNLVPLRAYFQAKE 455
+R + A + E + ++++ LRHP LV L F+
Sbjct: 70 --------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN 121
Query: 456 ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLK 515
E ++IY++ G LF + + ++ ++ V +GL ++H+ VH +LK
Sbjct: 122 EMVMIYEFMSGGELFEKVADEHNKMSE----DEAVEYMRQVCKGLCHMHEN-NYVHLDLK 176
Query: 516 SSNVLLGPDF--EACLADYCLTALTADSLQDDDPDNLL--------YKAPETRNASHQAT 565
N++ E L D+ LTA DP + + APE
Sbjct: 177 PENIMFTTKRSNELKLIDFGLTAHL-------DPKQSVKVTTGTAEFAAPEVAEGK-PVG 228
Query: 566 SKSDVYSFGVLLLELLTGKPP 586
+D++S GVL LL+G P
Sbjct: 229 YYTDMWSVGVLSYILLSGLSP 249
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHT 171
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 172 DDEMAGFVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 26/208 (12%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAG--------TSNEMYEQHMESVGGLRH 441
E LG G+ G ++ +R + A + E + ++++ LRH
Sbjct: 163 EELGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH 213
Query: 442 PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
P LV L F+ E ++IY++ G LF + + ++ ++ V +GL
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE----DEAVEYMRQVCKGLC 269
Query: 502 YIHQAWRLVHGNLKSSNVLLGPDF--EACLADYCLTA-LTADSLQDDDPDNLLYKAPETR 558
++H+ VH +LK N++ E L D+ LTA L + APE
Sbjct: 270 HMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 328
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
+D++S GVL LL+G P
Sbjct: 329 EGK-PVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 133/325 (40%), Gaps = 32/325 (9%)
Query: 343 IQIE-QENELQEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAEL---LGKGSLG 398
+Q+E Q E + R I + N F + + L ++ R + L LG G+ G
Sbjct: 2 MQMELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFG 61
Query: 399 TTYKAVLD------NRLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAY 450
Y+ + + L V VK L ++ +E+ + ME+ + H N+V
Sbjct: 62 EVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGV 118
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWR 508
R ++ + G L S + ++ ++P L L +A D+A G Y+ +
Sbjct: 119 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-H 177
Query: 509 LVHGNLKSSNVLL---GPDFEACLADYCLTA--LTADSLQDDDPDNLLYK-APETRNASH 562
+H ++ + N LL GP A + D+ + A + L K P
Sbjct: 178 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG 237
Query: 563 QATSKSDVYSFGVLLLELLT---GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLL 619
TSK+D +SFGVLL E+ + PS+ + E++ +V S D ++ G +
Sbjct: 238 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN----QEVLEFVTSGGRMDPPKNCP-GPVY 292
Query: 620 EVAIACNSASPEQRPTMWQVLKMLQ 644
+ C PE RP +L+ ++
Sbjct: 293 RIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 31/299 (10%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------NRLIVCVKRLDA 418
N F + + L ++ R + L LG G+ G Y+ + + L V VK L
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-- 83
Query: 419 SKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGS 476
++ +E+ + ME+ + L H N+V R ++ + G L S + +
Sbjct: 84 PEVCSEQDEL-DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 142
Query: 477 KSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLAD 531
+ ++P L L +A D+A G Y+ + +H ++ + N LL GP A + D
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGD 201
Query: 532 YCLT--ALTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLLLELLT---GKP 585
+ + A + L K P TSK+D +SFGVLL E+ +
Sbjct: 202 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
Query: 586 PSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
PS+ + E++ +V S D ++ G + + C PE RP +L+ ++
Sbjct: 262 PSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSN 426
LV G+ + Y LD ++ +G+GS G A V + +V VK++D K
Sbjct: 14 QLVVDPGDPRSY-LDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRR 65
Query: 427 EMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHW 486
E+ + + +H N+V + + +E ++ ++ G+L ++ ++ +
Sbjct: 66 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-- 123
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546
CL V Q LS +H A ++H ++KS ++LL D L+D+ A + +
Sbjct: 124 AVCLA----VLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 178
Query: 547 P--DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
+ APE + + D++S G++++E++ G+PP
Sbjct: 179 XLVGTPYWMAPEL-ISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAP 555
+ +GL YIH A ++H +LK SN+ + D E + D+ L T D + Y+AP
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-WYRAP 191
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
E D++S G ++ ELLTG+ P + H
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSN 426
LV G+ + Y LD ++ +G+GS G A V + +V VK++D K
Sbjct: 10 QLVVDPGDPRSY-LDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRR 61
Query: 427 EMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHW 486
E+ + + +H N+V + + +E ++ ++ G+L ++ ++ +
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-- 119
Query: 487 TSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD 546
CL V Q LS +H A ++H ++KS ++LL D L+D+ A + +
Sbjct: 120 AVCLA----VLQALSVLH-AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174
Query: 547 P--DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
+ APE + + D++S G++++E++ G+PP
Sbjct: 175 XLVGTPYWMAPEL-ISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE------TCTRFYTAEIVSALEYLHG 150
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + ++ + Y +PE
Sbjct: 151 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A+ SD+++ G ++ +L+ G PP
Sbjct: 210 -SASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 489 CLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTAD 540
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D+ L T D
Sbjct: 148 CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 206
Query: 541 SLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
+ Y+APE D++S G ++ ELLTG+
Sbjct: 207 EMTGYVATR-WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 34 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 144
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + ++ + Y +PE
Sbjct: 145 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 204 TEK-SACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 31/310 (10%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------N 407
R I + N F + + L ++ R + L LG G+ G Y+ + +
Sbjct: 41 RTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 100
Query: 408 RLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
L V VK L ++ +E+ + ME+ + H N+V R ++ +
Sbjct: 101 PLQVAVKTL--PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 157
Query: 466 NGSLFSLIHGSKSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL-- 521
G L S + ++ ++P L L +A D+A G Y+ + +H ++ + N LL
Sbjct: 158 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 216
Query: 522 -GPDFEACLADYCLT--ALTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLL 577
GP A + D+ + A + L K P TSK+D +SFGVLL
Sbjct: 217 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 276
Query: 578 LELLT---GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRP 634
E+ + PS+ + E++ +V S D ++ G + + C PE RP
Sbjct: 277 WEIFSLGYMPYPSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRP 331
Query: 635 TMWQVLKMLQ 644
+L+ ++
Sbjct: 332 NFAIILERIE 341
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAED 495
+G HPN++ L ++I ++ NGSL S + + + +
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVIQLVGMLRG 117
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---- 551
+A G+ Y+ VH L + N+L+ + ++D+ L+ D D + L
Sbjct: 118 IAAGMKYLADM-NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 552 ---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ APE + TS SDV+S+G+++ E+++ G+ P
Sbjct: 177 PIRWTAPEAIQY-RKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 31/310 (10%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------N 407
R I + N F + + L ++ R + L LG G+ G Y+ + +
Sbjct: 18 RTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 77
Query: 408 RLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
L V VK L ++ +E+ + ME+ + H N+V R ++ +
Sbjct: 78 PLQVAVKTL--PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 134
Query: 466 NGSLFSLIHGSKSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL-- 521
G L S + ++ ++P L L +A D+A G Y+ + +H ++ + N LL
Sbjct: 135 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 193
Query: 522 -GPDFEACLADYCLTA--LTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLL 577
GP A + D+ + A + L K P TSK+D +SFGVLL
Sbjct: 194 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 253
Query: 578 LELLT---GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRP 634
E+ + PS+ + E++ +V S D ++ G + + C PE RP
Sbjct: 254 WEIFSLGYMPYPSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRP 308
Query: 635 TMWQVLKMLQ 644
+L+ ++
Sbjct: 309 NFAIILERIE 318
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 128/323 (39%), Gaps = 57/323 (17%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------N 407
R I + N F + + L ++ R + L LG G+ G Y+ + +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 408 RLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
L V VK L ++ +E+ + ME+ + H N+V R ++ +
Sbjct: 61 PLQVAVKTL--PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 466 NGSLFSLIHGSKSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL-- 521
G L S + ++ ++P L L +A D+A G Y+ + +H ++ + N LL
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 176
Query: 522 -GPDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQA---------------- 564
GP A + D+ + QD +Y+A R
Sbjct: 177 PGPGRVAKIGDFGMA-------QD------IYRASYYRKGGCAMLPVKWMPPEAFMEGIF 223
Query: 565 TSKSDVYSFGVLLLELLT---GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEV 621
TSK+D +SFGVLL E+ + PS+ + E++ +V S D ++ G + +
Sbjct: 224 TSKTDTWSFGVLLWEIFSLGYMPYPSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRI 278
Query: 622 AIACNSASPEQRPTMWQVLKMLQ 644
C PE RP +L+ ++
Sbjct: 279 MTQCWQHQPEDRPNFAIILERIE 301
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 26/160 (16%)
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HPN+V L F + L+ + G LF I + K T I + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-----KKKKHFSETEASYIMRKLVSAV 119
Query: 501 SYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADSLQDDDPDN-------- 549
S++H +VH +LK N+L + E + D+ L PDN
Sbjct: 120 SHMHDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP-------PDNQPLKTPCF 171
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQ 588
L Y APE N + S D++S GV+L +L+G+ P Q
Sbjct: 172 TLHYAAPELLNQNGYDES-CDLWSLGVILYTMLSGQVPFQ 210
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V + +A E +L+ + G L + ++ + K + +++ V+
Sbjct: 83 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSM 136
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQDDDPDNLLYK 553
G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q + +
Sbjct: 137 GMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
APE N ++ +SKSDV+SFGVL+ E + G+ P
Sbjct: 196 APECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAG--TSNEMYEQHMESVGGLRHPNLVPL 447
E +GKG G ++ V VK + + E+Y+ M LRH N++
Sbjct: 15 ESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGF 68
Query: 448 RAYFQAKE----ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
A + L+ DY +GSLF ++ T +K+A A GL+++
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV------EGMIKLALSTASGLAHL 122
Query: 504 HQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---DPDNLL-- 551
H + H +LKS N+L+ + C+AD L A+ DS D P++ +
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGT 181
Query: 552 --YKAPE----TRNASH-QATSKSDVYSFGVLLLEL 580
Y APE + N H ++ ++D+Y+ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAG--TSNEMYEQHMESVGGLRHPNLVPL 447
E +GKG G ++ V VK + + E+Y+ M LRH N++
Sbjct: 48 ESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGF 101
Query: 448 RAYFQAKE----ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
A + L+ DY +GSLF ++ T +K+A A GL+++
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE------GMIKLALSTASGLAHL 155
Query: 504 HQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---DPDNLL-- 551
H + H +LKS N+L+ + C+AD L A+ DS D P++ +
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGT 214
Query: 552 --YKAPE----TRNASH-QATSKSDVYSFGVLLLEL 580
Y APE + N H ++ ++D+Y+ G++ E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V + +A E +L+ + G L + ++ + K + +++ V+
Sbjct: 85 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSM 138
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQDDDPDNLLYK 553
G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q + +
Sbjct: 139 GMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N ++ +SKSDV+SFGVL+ E + G+ P +
Sbjct: 198 APECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L +P +V + +A E +L+ + G L + ++ + K + +++ V+
Sbjct: 85 LDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK-----NIIELVHQVSM 138
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQDDDPDNLLYK 553
G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q + +
Sbjct: 139 GMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQ 588
APE N ++ +SKSDV+SFGVL+ E + G+ P +
Sbjct: 198 APECIN-YYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAG--TSNEMYEQHMESVGGLRHPNLVPL 447
E +GKG G ++ V VK + + E+Y+ M LRH N++
Sbjct: 9 ESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGF 62
Query: 448 RAYFQAKE----ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
A + L+ DY +GSLF ++ T +K+A A GL+++
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV------EGMIKLALSTASGLAHL 116
Query: 504 HQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---DPDNLL-- 551
H + H +LKS N+L+ + C+AD L A+ DS D P++ +
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGT 175
Query: 552 --YKAPE----TRNASH-QATSKSDVYSFGVLLLEL 580
Y APE + N H ++ ++D+Y+ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 38/222 (17%)
Query: 390 ELLGKGSLGTTYKA---VLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
+ LG+G G ++A V D + RL +LA E + ++++ L HP +V
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA---REKVMREVKALAKLEHPGIV- 66
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLH-WTS------------CLKIA 493
YF A E+ QP+ L + R + L W + CL I
Sbjct: 67 --RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--------------CLTALTA 539
+A+ + ++H L+H +LK SN+ D + D+ LT + A
Sbjct: 125 LQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 540 DSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELL 581
+ LY +PE + + + K D++S G++L ELL
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGN-SYSHKVDIFSLGLILFELL 224
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+GL YIH A ++H +LK N+ + D E + D+ L A ADS Y+APE
Sbjct: 139 KGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGL-ARQADSEMXGXVVTRWYRAPEV 196
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGK 584
+ T D++S G ++ E++TGK
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAG--TSNEMYEQHMESVGGLRHPNLVPL 447
E +GKG G ++ V VK + + E+Y+ M LRH N++
Sbjct: 12 ESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGF 65
Query: 448 RAYFQAKE----ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
A + L+ DY +GSLF ++ T +K+A A GL+++
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV------EGMIKLALSTASGLAHL 119
Query: 504 HQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---DPDNLL-- 551
H + H +LKS N+L+ + C+AD L A+ DS D P++ +
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGT 178
Query: 552 --YKAPE----TRNASH-QATSKSDVYSFGVLLLEL 580
Y APE + N H ++ ++D+Y+ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 31/310 (10%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------N 407
R I + N F + + L ++ R + L LG G+ G Y+ + +
Sbjct: 7 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 66
Query: 408 RLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
L V VK L ++ +E+ + ME+ + H N+V R ++ +
Sbjct: 67 PLQVAVKTL--PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 123
Query: 466 NGSLFSLIHGSKSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL-- 521
G L S + ++ ++P L L +A D+A G Y+ + +H ++ + N LL
Sbjct: 124 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 182
Query: 522 -GPDFEACLADYCLTA--LTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLL 577
GP A + D+ + A + L K P TSK+D +SFGVLL
Sbjct: 183 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 242
Query: 578 LELLT---GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRP 634
E+ + PS+ + E++ +V S D ++ G + + C PE RP
Sbjct: 243 WEIFSLGYMPYPSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRP 297
Query: 635 TMWQVLKMLQ 644
+L+ ++
Sbjct: 298 NFAIILERIE 307
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAG--TSNEMYEQHMESVGGLRHPNLVPL 447
E +GKG G ++ V VK + + E+Y+ M LRH N++
Sbjct: 10 ESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGF 63
Query: 448 RAYFQAKE----ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
A + L+ DY +GSLF ++ T +K+A A GL+++
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV------EGMIKLALSTASGLAHL 117
Query: 504 HQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---DPDNLL-- 551
H + H +LKS N+L+ + C+AD L A+ DS D P++ +
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGT 176
Query: 552 --YKAPE----TRNASH-QATSKSDVYSFGVLLLEL 580
Y APE + N H ++ ++D+Y+ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 98 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEYLHG 151
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + ++ + Y +PE
Sbjct: 152 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 211 -SACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAG--TSNEMYEQHMESVGGLRHPNLVPL 447
E +GKG G ++ V VK + + E+Y+ M LRH N++
Sbjct: 35 ESIGKGRFGEVWRGKWRGEE-VAVKIFSSREERSWFREAEIYQTVM-----LRHENILGF 88
Query: 448 RAYFQAKE----ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
A + L+ DY +GSLF ++ T +K+A A GL+++
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE------GMIKLALSTASGLAHL 142
Query: 504 HQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD---DPDNLL-- 551
H + H +LKS N+L+ + C+AD L A+ DS D P++ +
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL-AVRHDSATDTIDIAPNHRVGT 201
Query: 552 --YKAPE----TRNASH-QATSKSDVYSFGVLLLEL 580
Y APE + N H ++ ++D+Y+ G++ E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAP 555
+ +GL YIH A ++H +LK SN+ + D E + D+ L T D + Y+AP
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-WYRAP 191
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
E D++S G ++ ELLTG+ P + H
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + V +K + K S + + + + + L H LV L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ +I +Y NG L + + + R + L++ +DV + + Y+ + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESK-QFLH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN---LLYKAPETRNASHQATSKS 568
+L + N L+ ++D+ L+ D + + + PE S + +SKS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYS-KFSSKS 187
Query: 569 DVYSFGVLLLELLT-GKPPSQ 588
D+++FGVL+ E+ + GK P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSL-QDDDPDN 549
KI + L+++ + +++H ++K SN+LL L D+ ++ DS+ + D
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 550 LLYKAPETRN--ASHQATS-KSDVYSFGVLLLELLTGKPP 586
Y APE + AS Q +SDV+S G+ L EL TG+ P
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 14 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 124
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 125 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 184 TEK-SACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 15 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 125
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 126 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 185 TEK-SACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 34 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 144
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 145 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 204 TEK-SACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQD 544
+++ V+ G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q
Sbjct: 472 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530
Query: 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ + APE N ++ +SKSDV+SFGVL+ E + G+ P
Sbjct: 531 HGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 31/310 (10%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------N 407
R I + N F + + L ++ R + L LG G+ G Y+ + +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 408 RLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
L V VK L ++ +E+ + ME+ + H N+V R ++ +
Sbjct: 61 PLQVAVKTL--PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 117
Query: 466 NGSLFSLIHGSKSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL-- 521
G L S + ++ ++P L L +A D+A G Y+ + +H ++ + N LL
Sbjct: 118 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 176
Query: 522 -GPDFEACLADYCLTA--LTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLL 577
GP A + D+ + A + L K P TSK+D +SFGVLL
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 578 LELLT---GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRP 634
E+ + PS+ + E++ +V S D ++ G + + C PE RP
Sbjct: 237 WEIFSLGYMPYPSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRP 291
Query: 635 TMWQVLKMLQ 644
+L+ ++
Sbjct: 292 NFAIILERIE 301
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + V +K + K S + + + + + L H LV L
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ +I +Y NG L + + + R + L++ +DV + + Y+ + +H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESK-QFLH 127
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD-----SLQDDDPDNLLYKAPETRNASHQATS 566
+L + N L+ ++D+ L+ D S+ P + + PE S + +S
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYS-KFSS 184
Query: 567 KSDVYSFGVLLLELLT-GKPPSQ 588
KSD+++FGVL+ E+ + GK P +
Sbjct: 185 KSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 114/293 (38%), Gaps = 53/293 (18%)
Query: 392 LGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQ--HMESVGGLRHPN 443
LG G+ G +A D L V VK L ++ A + + M +G +H N
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG--QHEN 96
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLI------------------HGSKSTRAKPLH 485
+V L L+I +Y G L + + G +PL
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 486 WTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD 545
L + VAQG++++ +H ++ + NVLL A + D+ L D + D
Sbjct: 157 LRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDF---GLARDIMNDS 212
Query: 546 D---------PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNE 596
+ P + + APE+ T +SDV+S+G+LL E+ + LV ++
Sbjct: 213 NYIVKGNARLP--VKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 269
Query: 597 MMNWVRSAREDDGAEDERLGM----LLEVAIACNSASPEQRPTMWQVLKMLQE 645
V+ DG + + + + AC + P RPT Q+ LQE
Sbjct: 270 FYKLVK-----DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 317
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L H ++V +F+ + ++ + SL L R K L +
Sbjct: 72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVL 126
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YK 553
G Y+H+ R++H +LK N+ L D E + D+ L D + +L Y
Sbjct: 127 GCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDF---GLATKVEYDGERKKVLCGTPNYI 182
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + + DV+S G ++ LL GKPP + S L
Sbjct: 183 APEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCL 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + V +K + K S + + + + + L H LV L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ +I +Y NG L + + + R + L++ +DV + + Y+ + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESK-QFLH 128
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD-----SLQDDDPDNLLYKAPETRNASHQATS 566
+L + N L+ ++D+ L+ D S+ P + + PE S + +S
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYS-KFSS 185
Query: 567 KSDVYSFGVLLLELLT-GKPPSQ 588
KSD+++FGVL+ E+ + GK P +
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 390 ELLGKGSLGTTY--KAVLDNRLIV--CVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E+LG G+ + K L +L C+K+ A + + NE+ + ++H N+V
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEI-----AVLKKIKHENIV 69
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L +++ L+ G LF I G + + L + + V + Y+
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYL 122
Query: 504 HQAWRLVHGNLKSSNVL-LGPDFEA--CLADYCLTALTADSLQDDDPDNLLYKAPETRNA 560
H+ +VH +LK N+L L P+ + + D+ L+ + + + Y APE A
Sbjct: 123 HEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVL-A 180
Query: 561 SHQATSKSDVYSFGVLLLELLTGKPP 586
+ D +S GV+ LL G PP
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 13 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 123
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 124 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 183 TEK-SACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 12 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 122
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 123 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 182 TEK-SACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 19 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 129
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 130 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 189 TEK-SACKSSDLWALGCIIYQLVAGLPP 215
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-ALTADS----LQD 544
+++ V+ G+ Y+ ++ VH +L + NVLL A ++D+ L+ AL AD Q
Sbjct: 473 IELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 531
Query: 545 DDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ + APE N ++ +SKSDV+SFGVL+ E + G+ P
Sbjct: 532 HGKWPVKWYAPECINY-YKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 39/312 (12%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLD-----QLMRASAEL---LGKGSLGTTYKAVL--- 405
R+ + V+++ + E YT+ ++ R EL +G+G G ++ +
Sbjct: 355 RSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSP 414
Query: 406 DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
+N + + + + + E + Q ++ HP++V L + +I +
Sbjct: 415 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 473
Query: 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
G L S + R L S + A ++ L+Y+ ++ R VH ++ + NVL+ +
Sbjct: 474 LGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSSND 528
Query: 526 EACLADYCLTALTADSLQDDDPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT 582
L D+ L+ DS L + APE+ N + TS SDV+ FGV + E+L
Sbjct: 529 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILM 587
Query: 583 -GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM-------LLEVAIACNSASPEQRP 634
G P Q + N+++ R ++G ERL M L + C + P +RP
Sbjct: 588 HGVKPFQG--VKNNDVI-----GRIENG---ERLPMPPNCPPTLYSLMTKCWAYDPSRRP 637
Query: 635 TMWQVLKMLQEI 646
++ L I
Sbjct: 638 RFTELKAQLSTI 649
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 37 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 147
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 148 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 207 T-EKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEYLHG 150
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 151 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 210 -SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 31/299 (10%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------NRLIVCVKRLDA 418
N F + + L ++ R + L LG G+ G Y+ + + L V VK L
Sbjct: 11 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-- 68
Query: 419 SKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGS 476
++ +E+ + ME+ + H N+V R ++ + G L S + +
Sbjct: 69 PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRET 127
Query: 477 KSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLAD 531
+ ++P L L +A D+A G Y+ + +H ++ + N LL GP A + D
Sbjct: 128 RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGD 186
Query: 532 YCLT--ALTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLLLELLT---GKP 585
+ + A + L K P TSK+D +SFGVLL E+ +
Sbjct: 187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
Query: 586 PSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
PS+ + E++ +V S D ++ G + + C PE RP +L+ ++
Sbjct: 247 PSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + V +K + K S + + + + + L H LV L
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ +I +Y NG L + + + R + L++ +DV + + Y+ + +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESK-QFLH 123
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD-----SLQDDDPDNLLYKAPETRNASHQATS 566
+L + N L+ ++D+ L+ D S+ P + + PE S + +S
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYS-KFSS 180
Query: 567 KSDVYSFGVLLLELLT-GKPPSQ 588
KSD+++FGVL+ E+ + GK P +
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 31/299 (10%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------NRLIVCVKRLDA 418
N F + + L ++ R + L LG G+ G Y+ + + L V VK L
Sbjct: 11 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-- 68
Query: 419 SKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGS 476
++ +E+ + ME+ + H N+V R ++ + G L S + +
Sbjct: 69 PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 127
Query: 477 KSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLAD 531
+ ++P L L +A D+A G Y+ + +H ++ + N LL GP A + D
Sbjct: 128 RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGD 186
Query: 532 YCLT--ALTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLLLELLT---GKP 585
+ + A + L K P TSK+D +SFGVLL E+ +
Sbjct: 187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
Query: 586 PSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
PS+ + E++ +V S D ++ G + + C PE RP +L+ ++
Sbjct: 247 PSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + V +K + K S + + + + + L H LV L
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ +I +Y NG L + + + R + L++ +DV + + Y+ + +H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESK-QFLH 134
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD-----SLQDDDPDNLLYKAPETRNASHQATS 566
+L + N L+ ++D+ L+ D S+ P + + PE S + +S
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYS-KFSS 191
Query: 567 KSDVYSFGVLLLELLT-GKPPSQ 588
KSD+++FGVL+ E+ + GK P +
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEYLHG 148
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 149 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 208 -SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
LG G G + V +K + K S + + + + + L H LV L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 452 QAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVH 511
+ +I +Y NG L + + + R + L++ +DV + + Y+ + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL---REMRHR-FQTQQLLEMCKDVCEAMEYLESK-QFLH 143
Query: 512 GNLKSSNVLLGPDFEACLADYCLTALTAD-----SLQDDDPDNLLYKAPETRNASHQATS 566
+L + N L+ ++D+ L+ D S+ P + + PE S + +S
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYS-KFSS 200
Query: 567 KSDVYSFGVLLLELLT-GKPPSQ 588
KSD+++FGVL+ E+ + GK P +
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 37 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 147
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 148 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 207 TEK-SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEYLHG 148
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 149 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 208 -SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 31/299 (10%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------NRLIVCVKRLDA 418
N F + + L ++ R + L LG G+ G Y+ + + L V VK L
Sbjct: 3 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-- 60
Query: 419 SKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGS 476
++ +E+ + ME+ + H N+V R ++ + G L S + +
Sbjct: 61 PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 119
Query: 477 KSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLAD 531
+ ++P L L +A D+A G Y+ + +H ++ + N LL GP A + D
Sbjct: 120 RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGD 178
Query: 532 YCLT--ALTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLLLELLT---GKP 585
+ + A + L K P TSK+D +SFGVLL E+ +
Sbjct: 179 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 238
Query: 586 PSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
PS+ + E++ +V S D ++ G + + C PE RP +L+ ++
Sbjct: 239 PSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEYLHG 150
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 151 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 210 -SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 100 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIVSALEYLHG 153
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 154 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-E 211
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y QA+ L + + P+ + + +K L SC A VA+G+ Y+
Sbjct: 121 LREYLQARRPPGLEFSFNPSHN------PEEQLSSKDL--VSC---AYQVARGMEYLASK 169
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LLYKAPET---RN 559
+ +H +L + NVL+ D +AD+ L N + + APE R
Sbjct: 170 -KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRI 228
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVLL E+ T G P + + E+ ++ D + L
Sbjct: 229 YTHQ----SDVWSFGVLLWEIFTLGGSP---YPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 282 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 34/212 (16%)
Query: 391 LLGKGSLGTTYKAVLDNRL----IVCVKRLDASKLAGTSN---EMYEQHMESVGGLRHPN 443
+LGKGS G K +L R + VK L + + M E+ + ++ G + P
Sbjct: 348 VLGKGSFG---KVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPF 403
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
L L + FQ + + +Y G L + H + R K H + A ++A GL ++
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPH---AVFYAAEIAIGLFFL 458
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD--------DPDNLLYKAP 555
Q+ +++ +LK NV+L + +AD+ + +++ D PD Y AP
Sbjct: 459 -QSKGIIYRDLKLDNVMLDSEGHIKIADF---GMCKENIWDGVTTKXFCGTPD---YIAP 511
Query: 556 ETRNASHQATSKS-DVYSFGVLLLELLTGKPP 586
E ++Q KS D ++FGVLL E+L G+ P
Sbjct: 512 EI--IAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 98 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEYLHG 151
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 152 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 211 -SACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAP 555
+ +GL YIH A ++H +LK SN+ + D E + D+ L T D + Y+AP
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-WYRAP 191
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
E D++S G ++ ELLTG+ P + H
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 31/310 (10%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------N 407
R I + N F + + L ++ R + L LG G+ G Y+ + +
Sbjct: 27 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 86
Query: 408 RLIVCVKRLDASKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
L V VK L ++ +E+ + ME+ + H N+V R ++ +
Sbjct: 87 PLQVAVKTL--PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMA 143
Query: 466 NGSLFSLIHGSKSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL-- 521
G L S + ++ ++P L L +A D+A G Y+ + +H ++ + N LL
Sbjct: 144 GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTC 202
Query: 522 -GPDFEACLADYCLTA--LTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLL 577
GP A + D+ + A + L K P TSK+D +SFGVLL
Sbjct: 203 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 262
Query: 578 LELLT---GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRP 634
E+ + PS+ + E++ +V S D ++ G + + C PE RP
Sbjct: 263 WEIFSLGYMPYPSKSN----QEVLEFVTSGGRMDPPKN-CPGPVYRIMTQCWQHQPEDRP 317
Query: 635 TMWQVLKMLQ 644
+L+ ++
Sbjct: 318 NFAIILERIE 327
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 31/299 (10%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------NRLIVCVKRLDA 418
N F + + L ++ R + L LG G+ G Y+ + + L V VK L
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-- 83
Query: 419 SKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGS 476
++ +E+ + ME+ + H N+V R ++ + G L S + +
Sbjct: 84 PEVCSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRET 142
Query: 477 KSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLAD 531
+ ++P L L +A D+A G Y+ + +H ++ + N LL GP A + D
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGD 201
Query: 532 YCLT--ALTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLLLELLT---GKP 585
+ + A + L K P TSK+D +SFGVLL E+ +
Sbjct: 202 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
Query: 586 PSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
PS+ + E++ +V S D ++ G + + C PE RP +L+ ++
Sbjct: 262 PSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+GL YIH A ++H +LK SNV + D E + D+ L A AD Y+APE
Sbjct: 142 RGLKYIHSA-GIIHRDLKPSNVAVNEDSELRILDFGL-ARQADEEMTGYVATRWYRAPEI 199
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGK 584
D++S G ++ ELL GK
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+GL YIH A ++H +LK SNV + D E + D+ L A AD Y+APE
Sbjct: 142 RGLKYIHSA-GIIHRDLKPSNVAVNEDSELRILDFGL-ARQADEEMTGYVATRWYRAPEI 199
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGK 584
D++S G ++ ELL GK
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 389 AELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMY-EQHMESVGGLRHPN 443
++LG+GS T VL L +K L+ + + Y + + + L HP
Sbjct: 35 GKILGEGSFSTV---VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSY 502
V L FQ E+ Y NG L I S +C + ++ L Y
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEY 145
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETR 558
+H ++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 146 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 205 TEK-SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIVSALEYLHG 150
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 151 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 210 -SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+GL YIH A ++H +LK SNV + D E + D+ L A AD Y+APE
Sbjct: 134 RGLKYIHSA-GIIHRDLKPSNVAVNEDCELRILDFGL-ARQADEEMTGYVATRWYRAPEI 191
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGK 584
D++S G ++ ELL GK
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADSLQDDDPDN 549
KIA + + L ++H ++H ++K SNVL+ + D+ ++ L D +D D
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
Query: 550 LLYKAPETRNAS---HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE 606
Y APE N + KSD++S G+ +EL + P S+ P + + V
Sbjct: 200 KPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD-SWGTPFQQLKQVVEEPS 258
Query: 607 DDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLK----MLQEIKGA 649
D+ ++ C + ++RPT ++ + L E KG
Sbjct: 259 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGT 305
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 389 AELLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSNEMY-EQHMESVGGLRHPNLVP 446
++LG+GS T A L +K L+ + + Y + + + L HP V
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI-AEDVAQGLSYIHQ 505
L FQ E+ Y NG L I S +C + ++ L Y+H
Sbjct: 102 LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD------ETCTRFYTAEIVSALEYLHG 155
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL----YKAPETRNAS 561
++H +LK N+LL D + D+ + + + + + Y +PE
Sbjct: 156 KG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 562 HQATSKSDVYSFGVLLLELLTGKPP 586
A SD+++ G ++ +L+ G PP
Sbjct: 215 -SACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L H ++V +F+ + ++ + SL L R K L +
Sbjct: 96 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVL 150
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YK 553
G Y+H+ R++H +LK N+ L D E + D+ L D + +L Y
Sbjct: 151 GCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDF---GLATKVEYDGERKKVLCGTPNYI 206
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + + DV+S G ++ LL GKPP + S L
Sbjct: 207 APEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCL 244
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDRGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPAFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 60/308 (19%)
Query: 387 ASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNE---MYEQHMESVGGLRHPN 443
A E +GKG G ++ + + A K+ + +E E + + LRH N
Sbjct: 11 ALVECVGKGRYGEVWRGLWHGESV-------AVKIFSSRDEQSWFRETEIYNTVLLRHDN 63
Query: 444 LVPLRAY----FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
++ A + + LI Y +GSL+ + + T L L++A A G
Sbjct: 64 ILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ--RQTLEPHL----ALRLAVSAACG 117
Query: 500 LSYIHQAW-------RLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN--- 549
L+++H + H + KS NVL+ + + C+AD L + + D N
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 550 ---LLYKAPET-----RNASHQATSKSDVYSFGVLLLE-----LLTG-----KPPSQHSF 591
Y APE R ++ +D+++FG++L E ++ G +PP
Sbjct: 178 VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYD-- 235
Query: 592 LVPN----EMMNWVRSAREDDG------AEDERLGMLLEVAIACNSASPEQRPTMWQVLK 641
+VPN E M V + A D L L ++ C +P R T ++ K
Sbjct: 236 VVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKK 295
Query: 642 MLQEIKGA 649
LQ+I +
Sbjct: 296 TLQKISNS 303
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDAGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATR-WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L H ++V +F+ + ++ + SL L R K L +
Sbjct: 98 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVL 152
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YK 553
G Y+H+ R++H +LK N+ L D E + D+ L D + +L Y
Sbjct: 153 GCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDF---GLATKVEYDGERKKVLCGTPNYI 208
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + + DV+S G ++ LL GKPP + S L
Sbjct: 209 APEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCL 246
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 39/312 (12%)
Query: 357 RAQGIQVAKSGNLVFCAGEAQLYTLD-----QLMRASAEL---LGKGSLGTTYKAVL--- 405
R+ + V+++ + E YT+ ++ R EL +G+G G ++ +
Sbjct: 355 RSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSP 414
Query: 406 DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQP 465
+N + + + + + E + Q ++ HP++V L + +I +
Sbjct: 415 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 473
Query: 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
G L S + R L S + A ++ L+Y+ ++ R VH ++ + NVL+
Sbjct: 474 LGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSATD 528
Query: 526 EACLADYCLTALTADSLQDDDPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT 582
L D+ L+ DS L + APE+ N + TS SDV+ FGV + E+L
Sbjct: 529 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILM 587
Query: 583 -GKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM-------LLEVAIACNSASPEQRP 634
G P Q + N+++ R ++G ERL M L + C + P +RP
Sbjct: 588 HGVKPFQG--VKNNDVI-----GRIENG---ERLPMPPNCPPTLYSLMTKCWAYDPSRRP 637
Query: 635 TMWQVLKMLQEI 646
++ L I
Sbjct: 638 RFTELKAQLSTI 649
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 31/299 (10%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAEL---LGKGSLGTTYKAVLD------NRLIVCVKRLDA 418
N F + + L ++ R + L LG G+ G Y+ + + L V VK L
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-- 83
Query: 419 SKLAGTSNEMYEQHMES--VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGS 476
++ +E+ + ME+ + H N+V R ++ + G L S + +
Sbjct: 84 PEVYSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRET 142
Query: 477 KSTRAKP--LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLAD 531
+ ++P L L +A D+A G Y+ + +H ++ + N LL GP A + D
Sbjct: 143 RPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGD 201
Query: 532 YCLT--ALTADSLQDDDPDNLLYK-APETRNASHQATSKSDVYSFGVLLLELLT---GKP 585
+ + A + L K P TSK+D +SFGVLL E+ +
Sbjct: 202 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
Query: 586 PSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQ 644
PS+ + E++ +V S D ++ G + + C PE RP +L+ ++
Sbjct: 262 PSKSN----QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 33/212 (15%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
++LG G+ A D R +V +K + L G M E + + ++HPN+V L
Sbjct: 24 DVLGTGAFSEVILAE-DKRTQKLVAIKCIAKEALEGKEGSM-ENEIAVLHKIKHPNIVAL 81
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
+++ LI G LF I G + R ++ V + Y+H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-------DASRLIFQVLDAVKYLHD 134
Query: 506 AWRLVHGNLKSSNVL---LGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKA 554
+VH +LK N+L L D + ++D+ L+ + +DP ++L Y A
Sbjct: 135 L-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLSTACGTPGYVA 186
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE A + D +S GV+ LL G PP
Sbjct: 187 PEVL-AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+GL YIH A +VH +LK N+ + D E + D+ L A AD+ Y+APE
Sbjct: 155 KGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGL-ARHADAEMTGYVVTRWYRAPEV 212
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGK 584
+ D++S G ++ E+LTGK
Sbjct: 213 ILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP LV L + FQ + + +Y G L + H + + H + +++ L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEH---ARFYSAEISLAL 134
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAP 555
+Y+H+ +++ +LK NVLL + L DY + + L+ D + Y AP
Sbjct: 135 NYLHER-GIIYRDLKLDNVLLDSEGHIKLTDY---GMCKEGLRPGDTTSXFCGTPNYIAP 190
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E S D ++ GVL+ E++ G+ P
Sbjct: 191 EILRGEDYGFS-VDWWALGVLMFEMMAGRSP 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L H ++V +F+ + ++ + SL L R K L +
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVL 128
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL-TALTADSLQDDD----PDNLLYK 553
G Y+H+ R++H +LK N+ L D E + D+ L T + D + P+ Y
Sbjct: 129 GCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN---YI 184
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + + DV+S G ++ LL GKPP + S L
Sbjct: 185 APEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L H ++V +F+ + ++ + SL L R K L +
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVL 128
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL-TALTADSLQDDD----PDNLLYK 553
G Y+H+ R++H +LK N+ L D E + D+ L T + D + P+ Y
Sbjct: 129 GCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN---YI 184
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + + DV+S G ++ LL GKPP + S L
Sbjct: 185 APEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCL 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 33/212 (15%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
++LG G+ A D R +V +K + L G M E + + ++HPN+V L
Sbjct: 24 DVLGTGAFSEVILAE-DKRTQKLVAIKCIAKEALEGKEGSM-ENEIAVLHKIKHPNIVAL 81
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
+++ LI G LF I G + R ++ V + Y+H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-------DASRLIFQVLDAVKYLHD 134
Query: 506 AWRLVHGNLKSSNVL---LGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKA 554
+VH +LK N+L L D + ++D+ L+ + +DP ++L Y A
Sbjct: 135 L-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLSTACGTPGYVA 186
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE A + D +S GV+ LL G PP
Sbjct: 187 PEVL-AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 33/212 (15%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
++LG G+ A D R +V +K + L G M E + + ++HPN+V L
Sbjct: 24 DVLGTGAFSEVILAE-DKRTQKLVAIKCIAKEALEGKEGSM-ENEIAVLHKIKHPNIVAL 81
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
+++ LI G LF I G + R ++ V + Y+H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-------DASRLIFQVLDAVKYLHD 134
Query: 506 AWRLVHGNLKSSNVL---LGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKA 554
+VH +LK N+L L D + ++D+ L+ + +DP ++L Y A
Sbjct: 135 L-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLSTACGTPGYVA 186
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE A + D +S GV+ LL G PP
Sbjct: 187 PEVL-AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP LV L + FQ + + +Y G L + H + + H + +++ L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEH---ARFYSAEISLAL 166
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAP 555
+Y+H+ +++ +LK NVLL + L DY + + L+ D + Y AP
Sbjct: 167 NYLHER-GIIYRDLKLDNVLLDSEGHIKLTDY---GMCKEGLRPGDTTSTFCGTPNYIAP 222
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E S D ++ GVL+ E++ G+ P
Sbjct: 223 EILRGEDYGFS-VDWWALGVLMFEMMAGRSP 252
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + D L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDGGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+GL YIH A +VH +LK N+ + D E + D+ L A AD+ Y+APE
Sbjct: 137 KGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGL-ARHADAEMTGYVVTRWYRAPEV 194
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGK 584
+ D++S G ++ E+LTGK
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
L H ++V +F+ + ++ + SL L R K L +
Sbjct: 78 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-----HKRRKALTEPEARYYLRQIVL 132
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL-TALTADSLQDDD----PDNLLYK 553
G Y+H+ R++H +LK N+ L D E + D+ L T + D + P+ Y
Sbjct: 133 GCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN---YI 188
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFL 592
APE + + + DV+S G ++ LL GKPP + S L
Sbjct: 189 APEVLSKKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCL 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 105 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 159 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 214
Query: 586 P 586
P
Sbjct: 215 P 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 33/212 (15%)
Query: 390 ELLGKGSLGTTYKAVLDNRL--IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPL 447
++LG G+ A D R +V +K + L G M E + + ++HPN+V L
Sbjct: 24 DVLGTGAFSEVILAE-DKRTQKLVAIKCIAKKALEGKEGSM-ENEIAVLHKIKHPNIVAL 81
Query: 448 RAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
+++ LI G LF I G + R ++ V + Y+H
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTER-------DASRLIFQVLDAVKYLHD 134
Query: 506 AWRLVHGNLKSSNVL---LGPDFEACLADYCLTALTADSLQDDDPDNLL--------YKA 554
+VH +LK N+L L D + ++D+ L+ + +DP ++L Y A
Sbjct: 135 L-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLSTACGTPGYVA 186
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE A + D +S GV+ LL G PP
Sbjct: 187 PEVL-AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 18/204 (8%)
Query: 390 ELLGKGSLGTTYKAVLD----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G G G + L V +K L E + +G HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE-ASIMGQFEHPNII 80
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
L +++ ++ NG+L S + + + + +A G+ Y+ +
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLAE 136
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-------YKAPETR 558
VH +L + N+L+ + ++D+ L+ ++ D + L + APE
Sbjct: 137 M-SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA- 194
Query: 559 NASHQATSKSDVYSFGVLLLELLT 582
A + TS SD +S+G+++ E+++
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 69
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 121
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 122 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHL-- 234
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 235 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 260
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 69
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 121
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 122 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIGGQVFFRQRVSSECQHL-- 234
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 235 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 260
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP LV L + FQ + + +Y G L + H + + H + +++ L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEH---ARFYSAEISLAL 119
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAP 555
+Y+H+ +++ +LK NVLL + L DY + + L+ D + Y AP
Sbjct: 120 NYLHER-GIIYRDLKLDNVLLDSEGHIKLTDY---GMCKEGLRPGDTTSXFCGTPNYIAP 175
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E S D ++ GVL+ E++ G+ P
Sbjct: 176 EILRGEDYGFS-VDWWALGVLMFEMMAGRSP 205
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 105 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 159 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 214
Query: 586 P 586
P
Sbjct: 215 P 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + + ++ V +K L + + E+
Sbjct: 8 QALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEIL 67
Query: 430 EQH--MESVGGLRHPNL--VPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKP-- 483
++ M VG L + L + Q L+ P G L + ++
Sbjct: 68 DEAYVMAGVGSPYVSRLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGSQDL 121
Query: 484 LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TA 539
L+W C++IA +G+SY+ RLVH +L + NVL+ + D+ L L
Sbjct: 122 LNW--CMQIA----KGMSYLEDV-RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 540 DSLQDDDPDNLLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ D + + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQ----SDVWSYGVTVWELMT 216
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
HP LV L + FQ + + +Y G L + H + + H + +++ L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEH---ARFYSAEISLAL 123
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-----YKAP 555
+Y+H+ +++ +LK NVLL + L DY + + L+ D + Y AP
Sbjct: 124 NYLHER-GIIYRDLKLDNVLLDSEGHIKLTDY---GMCKEGLRPGDTTSXFCGTPNYIAP 179
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E S D ++ GVL+ E++ G+ P
Sbjct: 180 EILRGEDYGFS-VDWWALGVLMFEMMAGRSP 209
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 28/225 (12%)
Query: 381 LDQLMRASAELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGL 439
+ + + ++ELLG+G+ AV L N VK ++ K AG S + +E++
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIE--KQAGHSRSRVFREVETLYQC 67
Query: 440 R-HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
+ + N++ L +F+ L+++ GS+ + I + K + ++ DVA
Sbjct: 68 QGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQ-----KQKHFNEREASRVVRDVAA 122
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYC-------------LTALTADSLQDD 545
L ++H + H +LK N+L + C T +T L
Sbjct: 123 ALDFLHTK-GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 546 DPDNLLYKAPETRNA-SHQAT---SKSDVYSFGVLLLELLTGKPP 586
+ Y APE + QAT + D++S GV+L +L+G PP
Sbjct: 182 -CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 487 TSCLKIAEDVAQ--------GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALT 538
C K+ +D Q GL YIH A ++H +LK SN+ + D E + + L T
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILGFGLARHT 175
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGK---PPSQH 589
D + Y+APE D++S G ++ ELLTG+ P + H
Sbjct: 176 DDEMTGYVATRW-YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 436 VGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIA 493
+G HPN+V L + +++ ++ NG+L + + H + T + + +
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQ------LVGML 151
Query: 494 EDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-- 551
+A G+ Y+ VH +L + N+L+ + ++D+ L+ + +DDP+ +
Sbjct: 152 RGIAAGMRYLADM-GYVHRDLAARNILVNSNLVCKVSDFGLSRVI-----EDDPEAVYTT 205
Query: 552 --------YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
+ APE + TS SDV+S+G+++ E+++ G+ P
Sbjct: 206 TGGKIPVRWTAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 73
Query: 443 NLVPLRAYFQAKEERLLIYD-YQPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ--------VLE 125
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 126 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 184
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 21/209 (10%)
Query: 392 LGKGSLGTTYKAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
+G GS G K D +++V K LD + +M + + L+HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVW-KELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---R 69
Query: 450 YFQAKEER-----LLIYDYQPNGSLFSLIHGSKSTRAKP-LHWTSCLKIAEDVAQGLSYI 503
Y+ +R ++ +Y G L S+I +K T+ + L L++ + L
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 504 HQ----AWRLVHGNLKSSNVLLGPDFEACLADYCLTAL--TADSLQDDDPDNLLYKAPET 557
H+ ++H +LK +NV L L D+ L + + + Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQ 187
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP 586
N KSD++S G LL EL PP
Sbjct: 188 MN-RMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 88/209 (42%), Gaps = 19/209 (9%)
Query: 390 ELLGKGSLGTTYKAVLD----NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
E++G G G + L V +K L E + +G HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA-SIMGQFEHPNII 78
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
L +++ ++ NG+L S + + + + +A G+ Y+ +
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLAE 134
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL-------YKAPETR 558
VH +L + N+L+ + ++D+ L+ ++ D + L + APE
Sbjct: 135 M-SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA- 192
Query: 559 NASHQATSKSDVYSFGVLLLELLT-GKPP 586
A + TS SD +S+G+++ E+++ G+ P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSA 120
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H +V+ +LK N++L D + D+ C + + Y APE
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 180
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 181 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 230
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 96
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 97 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 148
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 149 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 207
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 72
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 73 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 124
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 125 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 183
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 54/292 (18%)
Query: 389 AELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQ--HMESVGGLR 440
+ LG G+ G +A D L V VK L ++ A + + M +G +
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG--Q 108
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSL----------------FSLIHGSKSTRAKPL 484
H N+V L L+I +Y G L F++ + + STR L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR-DLL 167
Query: 485 HWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD 544
H++S VAQG++++ +H ++ + NVLL A + D+ L D + D
Sbjct: 168 HFSS------QVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDF---GLARDIMND 217
Query: 545 DD---PDN----LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEM 597
+ N + + APE+ T +SDV+S+G+LL E+ + LV ++
Sbjct: 218 SNYIVKGNARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 276
Query: 598 MNWVRSAREDDGAEDERLGM----LLEVAIACNSASPEQRPTMWQVLKMLQE 645
V+ DG + + + + AC + P RPT Q+ LQE
Sbjct: 277 YKLVK-----DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 74
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 126
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 127 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 185
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 69
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 121
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 122 AVRHCHNX-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 427 EMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRA---KP 483
E Q + + L HPN+V L E L +F L++ KP
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYM-------VFELVNQGPVMEVPTLKP 133
Query: 484 LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA--LTADS 541
L +D+ +G+ Y+H +++H ++K SN+L+G D +AD+ ++ +D+
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 542 LQDDDPDNLLYKAPETRNASHQATSKS--DVYSFGVLLLELLTGKPP 586
L + + APE+ + + + S DV++ GV L + G+ P
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 29/237 (12%)
Query: 358 AQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVC 412
A GI+ ++ N +A L L + ++LG G+ GT YK + ++ V
Sbjct: 2 AMGIRSGEAPN------QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 55
Query: 413 VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSL 472
+K L + + E+ ++ + + +P++ L +L I P G L
Sbjct: 56 IKELREATSPKANKEILDEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDY 113
Query: 473 IHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY 532
+ K C++IA +G++Y+ RLVH +L + NVL+ + D+
Sbjct: 114 VREHKDNIGSQYLLNWCVQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 168
Query: 533 CLTALTADSLQDDDPDN----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
L L ++ + + + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 169 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 221
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 383 QLMRASAEL---LGKGSLGTTYKAVL----DNRLIVCVKRLDASKLAGTSNEMYEQHMES 435
++ R EL +G+G G ++ + + L V +K TS+ + E+ ++
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSVREKFLQE 66
Query: 436 VGGLR---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI 492
+R HP++V L + +I + G L S + R L S +
Sbjct: 67 ALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILY 121
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL- 551
A ++ L+Y+ R VH ++ + NVL+ + L D+ L+ DS L
Sbjct: 122 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
Query: 552 --YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDD 608
+ APE+ N + TS SDV+ FGV + E+L G P Q + N+++ R ++
Sbjct: 181 IKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIEN 232
Query: 609 GAEDERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
G ERL M L + C + P +RP ++ L I
Sbjct: 233 G---ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 74
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 126
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 127 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 185
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSA 121
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H +V+ +LK N++L D + D+ C + + Y APE
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 181
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 182 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 231
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 376 AQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMYE 430
A L L + ++LG G+ GT YK + ++ V +K L + + E+ +
Sbjct: 4 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 63
Query: 431 QHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCL 490
+ + + +P++ L +L I P G L + K C+
Sbjct: 64 EAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN- 549
+IAE G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 122 QIAE----GMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 550 ---LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 177 KVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 211
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 31/177 (17%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
LRHPN+V + ++ +Y G LF I + + +ED A+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-------------CNAGRFSEDEAR 118
Query: 499 --------GLSYIHQAWRLVHGNLKSSNVLL----GPDFEACLADYCLTALTADSLQDDD 546
G+SY H A ++ H +LK N LL P + C Y +++ S D
Sbjct: 119 FFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH-SQPKDT 176
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRS 603
Y APE +DV+S GV L +L G P F P E N+ ++
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP----FEDPEEPKNFRKT 229
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 392 LGKGSLGTTYKA---VLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
LG+G+ T YK + DN + + RL+ + A + + + + L+H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI---REVSLLKDLKHANIVTLH 66
Query: 449 AYFQAKEERLLIYDYQPN---------GSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
++ L+++Y G++ ++ H K + L +G
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINM-HNVKLFLFQLL-------------RG 112
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LLYKAP 555
L+Y H+ +++H +LK N+L+ E LAD+ L A S+ DN L Y+ P
Sbjct: 113 LAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPP 169
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ S +++ D++ G + E+ TG+P
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATGRP 199
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 383 QLMRASAEL---LGKGSLGTTYKAVL----DNRLIVCVKRLDASKLAGTSNEMYEQHMES 435
++ R EL +G+G G ++ + + L V +K TS+ + E+ ++
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSVREKFLQE 89
Query: 436 VGGLR---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI 492
+R HP++V L + +I + G L S + R L S +
Sbjct: 90 ALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILY 144
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL- 551
A ++ L+Y+ R VH ++ + NVL+ + L D+ L+ DS L
Sbjct: 145 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
Query: 552 --YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDD 608
+ APE+ N + TS SDV+ FGV + E+L G P Q + N+++ R ++
Sbjct: 204 IKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIEN 255
Query: 609 GAEDERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
G ERL M L + C + P +RP ++ L I
Sbjct: 256 G---ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR + G E E+ + + + HPN++ L ++ + + +LI + G LF +
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S + TS +K + G++Y+H ++ H +LK N++L P L
Sbjct: 107 AQKESLSEEEA--TSFIK---QILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 530 ADYCLTALTADSLQDDD----PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L D ++ + P+ + APE N ++D++S GV+ LL+G
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPE---FVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 216
Query: 586 P 586
P
Sbjct: 217 P 217
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 390 ELLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LGKG+ + V K ++ KL+ ++ E+ L+HPN+V L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 449 AYFQAKEERLLIYDYQPNGSLFS-LIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ L++D G LF ++ + A H C+ + + +++IHQ
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CI---HQILESVNHIHQH- 149
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADSLQ-----DDDPDNLLYKAPETRN 559
+VH +LK N+LL + LAD+ L Q P Y +PE
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPG---YLSPEVLR 206
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPP 586
D+++ GV+L LL G PP
Sbjct: 207 KDPYG-KPVDIWACGVILYILLVGYPP 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 34/281 (12%)
Query: 383 QLMRASAEL---LGKGSLGTTYKAVL---DNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
++ R EL +G+G G ++ + +N + + + + + E + Q ++
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
HP++V L + +I + G L S + R L S + A +
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQL 120
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---YK 553
+ L+Y+ R VH ++ + NVL+ + L D+ L+ DS L +
Sbjct: 121 STALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM 179
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED 612
APE+ N + TS SDV+ FGV + E+L G P Q + N+++ R ++G
Sbjct: 180 APESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG--- 228
Query: 613 ERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
ERL M L + C + P +RP ++ L I
Sbjct: 229 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 116
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 168
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 169 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 227
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHL-- 281
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 282 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 307
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 73
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 74 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 125
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 126 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 184
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 383 QLMRASAEL---LGKGSLGTTYKAVL----DNRLIVCVKRLDASKLAGTSNEMYEQHMES 435
++ R EL +G+G G ++ + + L V +K TS+ + E+ ++
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSVREKFLQE 61
Query: 436 VGGLR---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI 492
+R HP++V L + +I + G L S + R L S +
Sbjct: 62 ALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILY 116
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL- 551
A ++ L+Y+ R VH ++ + NVL+ + L D+ L+ DS L
Sbjct: 117 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 552 --YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDD 608
+ APE+ N + TS SDV+ FGV + E+L G P Q + N+++ R ++
Sbjct: 176 IKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIEN 227
Query: 609 GAEDERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
G ERL M L + C + P +RP ++ L I
Sbjct: 228 G---ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSA 122
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H +V+ +LK N++L D + D+ C + + Y APE
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV 182
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 183 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 232
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 367 GNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKL 421
G++ +A L L + ++LG G+ GT YK + ++ V +K L +
Sbjct: 1 GSMGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 422 AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRA 481
+ E+ ++ + + +P++ L +L I P G L + K
Sbjct: 61 PKANKEILDEAY-VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIG 118
Query: 482 KPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541
C++IA +G++Y+ RLVH +L + NVL+ + D+ L L
Sbjct: 119 SQYLLNWCVQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 542 LQDDDPDN----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
++ + + + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR S G S E E+ + + ++HPN++ L ++ K + +LI + G LF +
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL 105
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S L + + + G+ Y+H + ++ H +LK N++L P +
Sbjct: 106 AEKES-----LTEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 530 ADYCLTALTADSLQDDDPDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L A D ++ N+ + APE N ++D++S GV+ LL+G
Sbjct: 160 IDFGL-AHKIDF--GNEFKNIFGTPEFVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 215
Query: 586 P 586
P
Sbjct: 216 P 216
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 74
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 126
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 127 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 185
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHL-- 239
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 240 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 265
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 102
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 154
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 155 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 213
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIGGQVFFRQRVSSECQHL-- 267
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 268 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 293
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 116
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 168
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 169 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 227
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 101
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 153
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 154 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 212
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIGGQVFFRQRVSSECQHL-- 266
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 267 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 292
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 101
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 153
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 154 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 212
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHL-- 266
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 267 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 102
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 154
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 155 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 213
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIGGQVFFRQRVSSECQHL-- 267
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 268 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 101
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 153
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 154 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 212
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIGGQVFFRQRVSSECQHL-- 266
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 267 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 292
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 23/228 (10%)
Query: 367 GNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKL 421
G++ +A L L + ++LG G+ GT YK + ++ V +K L +
Sbjct: 1 GSMGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
Query: 422 AGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRA 481
+ E+ ++ + + +P++ L +L I P G L + K
Sbjct: 61 PKANKEILDEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIG 118
Query: 482 KPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS 541
C++IA +G++Y+ RLVH +L + NVL+ + D+ L L
Sbjct: 119 SQYLLNWCVQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 542 LQDDDPDN----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
++ + + + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 217
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 102
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 154
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 155 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 213
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 21/209 (10%)
Query: 392 LGKGSLGTTYKAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
+G GS G K D +++V K LD + +M + + L+HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVW-KELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---R 69
Query: 450 YFQAKEER-----LLIYDYQPNGSLFSLIHGSKSTRAKP-LHWTSCLKIAEDVAQGLSYI 503
Y+ +R ++ +Y G L S+I +K T+ + L L++ + L
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 504 HQ----AWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTAD-SLQDDDPDNLLYKAPET 557
H+ ++H +LK +NV L L D+ L L D S Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ 187
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP 586
N KSD++S G LL EL PP
Sbjct: 188 MN-RMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 101
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 153
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 154 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 212
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 66 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 124 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 179 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 214
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 102
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 154
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 155 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 213
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 363 VAKSGNLVF-CAGEAQLYTLDQLMRASA----ELLGKGSLGTTYKAVL-----DNRLIVC 412
+ + NL F +GEA L ++++ + ++LG G+ GT YK + ++ V
Sbjct: 14 IPTTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 73
Query: 413 VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSL 472
+K L + + E+ ++ + + +P++ L +L I P G L
Sbjct: 74 IKELREATSPKANKEILDEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDY 131
Query: 473 IHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY 532
+ K C++IA +G++Y+ RLVH +L + NVL+ + D+
Sbjct: 132 VREHKDNIGSQYLLNWCVQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 186
Query: 533 CLTALTADSLQDDDPDN----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
L L ++ + + + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 187 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 239
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 89
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 141
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 142 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 200
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 113/277 (40%), Gaps = 40/277 (14%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 108
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 160
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 161 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 219
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGM 617
+ V+S G+LL +++ G P +H E++ R+ +E + L
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHL-- 273
Query: 618 LLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
C + P RPT +EI+ M+D
Sbjct: 274 ----IRWCLALRPSDRPT-------FEEIQNHPWMQD 299
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 34/281 (12%)
Query: 383 QLMRASAEL---LGKGSLGTTYKAVL---DNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
++ R EL +G+G G ++ + +N + + + + + E + Q ++
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
HP++V L + +I + G L S + R L S + A +
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQL 120
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---YK 553
+ L+Y+ R VH ++ + NVL+ + L D+ L+ DS L +
Sbjct: 121 STALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED 612
APE+ N + TS SDV+ FGV + E+L G P Q + N+++ R ++G
Sbjct: 180 APESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG--- 228
Query: 613 ERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
ERL M L + C + P +RP ++ L I
Sbjct: 229 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 115/285 (40%), Gaps = 40/285 (14%)
Query: 389 AELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQ--HMESVGGLR 440
+ LG G+ G +A D L V VK L ++ A + + M +G +
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG--Q 108
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIH-GSKSTRAKP--------LHWTSCLK 491
H N+V L L+I +Y G L + + S+ P L L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 492 IAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD---PD 548
+ VAQG++++ +H ++ + NVLL A + D+ L D + D +
Sbjct: 169 FSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDF---GLARDIMNDSNYIVKG 224
Query: 549 N----LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSA 604
N + + APE+ T +SDV+S+G+LL E+ + LV ++ V+
Sbjct: 225 NARLPVKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK-- 281
Query: 605 REDDGAEDERLGM----LLEVAIACNSASPEQRPTMWQVLKMLQE 645
DG + + + + AC + P RPT Q+ LQE
Sbjct: 282 ---DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 89
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 141
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 142 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 200
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 88
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 140
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 141 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 199
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 121
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 122 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 173
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 174 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 232
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 39/292 (13%)
Query: 373 AGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL----DNRLIVCVKRLDASKLAGTSNEM 428
+G + Y + + +G+G G ++ + + L V +K TS+ +
Sbjct: 2 SGSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSV 57
Query: 429 YEQHMESVGGLR---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLH 485
E+ ++ +R HP++V L + +I + G L S + R L
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLD 112
Query: 486 WTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD 545
S + A ++ L+Y+ R VH ++ + NVL+ + L D+ L+ DS
Sbjct: 113 LASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 171
Query: 546 DPDNLL---YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWV 601
L + APE+ N + TS SDV+ FGV + E+L G P Q + N+++
Sbjct: 172 ASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI--- 225
Query: 602 RSAREDDGAEDERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R ++G ERL M L + C + P +RP ++ L I
Sbjct: 226 --GRIENG---ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 89
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 141
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 142 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 200
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 383 QLMRASAEL---LGKGSLGTTYKAVL----DNRLIVCVKRLDASKLAGTSNEMYEQHMES 435
++ R EL +G+G G ++ + + L V +K TS+ + E+ ++
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSVREKFLQE 58
Query: 436 VGGLR---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI 492
+R HP++V L + +I + G L S + R L S +
Sbjct: 59 ALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILY 113
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL- 551
A ++ L+Y+ R VH ++ + NVL+ + L D+ L+ DS L
Sbjct: 114 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 552 --YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDD 608
+ APE+ N + TS SDV+ FGV + E+L G P Q + N+++ R ++
Sbjct: 173 IKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIEN 224
Query: 609 GAEDERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
G ERL M L + C + P +RP ++ L I
Sbjct: 225 G---ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADSLQDDDPDN 549
K+ + + L Y+ + ++H ++K SN+LL + L D+ ++ L D +D
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC 187
Query: 550 LLYKAPETRNASHQATS----KSDVYSFGVLLLELLTGKPPSQH 589
Y APE + ++DV+S G+ L+EL TG+ P ++
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 21/209 (10%)
Query: 392 LGKGSLGTTYKAVL--DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRA 449
+G GS G K D +++V K LD + +M + + L+HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVW-KELDYGSMTEAEKQMLVSEVNLLRELKHPNIV---R 69
Query: 450 YFQAKEER-----LLIYDYQPNGSLFSLIHGSKSTRAKP-LHWTSCLKIAEDVAQGLSYI 503
Y+ +R ++ +Y G L S+I +K T+ + L L++ + L
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 504 HQ----AWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTAD-SLQDDDPDNLLYKAPET 557
H+ ++H +LK +NV L L D+ L L D S Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ 187
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP 586
N KSD++S G LL EL PP
Sbjct: 188 MN-RMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSA 263
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H +V+ +LK N++L D + D+ C + + Y APE
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 323
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 324 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 373
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 66 DEAY-VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 124 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 179 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 68 DEAY-VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 126 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 181 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 216
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 391 LLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLA-------GTSNEMYEQHMESVGGLRHP 442
LLG G G+ Y + + + L V +K ++ +++ GT M ++ V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-GFS 88
Query: 443 NLVPLRAYFQAKEERLLIYDY-QPNGSLFSLIHGSKSTR---AKPLHWTSCLKIAEDVAQ 498
++ L +F+ + +LI + +P LF I + + A+ W V +
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ--------VLE 140
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPET 557
+ + H ++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 141 AVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 199
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHS 590
+ V+S G+LL +++ G P +H
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 7 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 66
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 67 DEAY-VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWC 124
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 125 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 180 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 215
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 11/171 (6%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSA 260
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H +V+ +LK N++L D + D+ C + + Y APE
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 321 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 370
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 383 QLMRASAEL---LGKGSLGTTYKAVL----DNRLIVCVKRLDASKLAGTSNEMYEQHMES 435
++ R EL +G+G G ++ + + L V +K TS+ + E+ ++
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSVREKFLQE 63
Query: 436 VGGLR---HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKI 492
+R HP++V L + +I + G L S + R L S +
Sbjct: 64 ALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILY 118
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL- 551
A ++ L+Y+ R VH ++ + NVL+ + L D+ L+ DS L
Sbjct: 119 AYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
Query: 552 --YKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDD 608
+ APE+ N + TS SDV+ FGV + E+L G P Q + N+++ R ++
Sbjct: 178 IKWMAPESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIEN 229
Query: 609 GAEDERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
G ERL M L + C + P +RP ++ L I
Sbjct: 230 G---ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 7 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 66
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 67 DEAY-VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWC 124
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 125 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 180 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 35/218 (16%)
Query: 392 LGKGSLGTTYKAVLDNRLIVC-VK--RLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
LG+GS G ++ C VK RL+ ++ + + + GL P +VPL
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV---------EELVACAGLSSPRIVPLY 130
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ + + GSL LI + L L +GL Y+H R
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTR-R 184
Query: 509 LVHGNLKSSNVLLGPD-FEACLADY----CL-------TALTADSLQDDDPDNLLYKAPE 556
++HG++K+ NVLL D A L D+ CL + LT D + P + APE
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI----PGTETHMAPE 240
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP 594
+K D++S ++L +L G P F P
Sbjct: 241 VVMGK-PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 277
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 10 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 69
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 70 DEAY-VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWC 127
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 128 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 183 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 218
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 68
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 69 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 126
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 127 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 182 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 68 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 126 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 181 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 66 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 124 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 179 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 214
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 66 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWC 123
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 124 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 179 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 214
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 148 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 204 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 256
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 12 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 71
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 72 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 129
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 130 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 185 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 16 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 75
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 76 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 133
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 134 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 189 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 224
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 148 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 204 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 256
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR + G S E E+ + + + H N++ L ++ + + +LI + G LF +
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S + TS +K + G++Y+H ++ H +LK N++L P L
Sbjct: 107 AQKESLSEEEA--TSFIK---QILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 530 ADYCLTALTADSLQDDD----PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L D ++ + P+ + APE N ++D++S GV+ LL+G
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPE---FVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 216
Query: 586 P 586
P
Sbjct: 217 P 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 68
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 69 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 126
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 127 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 182 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR + G S E E+ + + + H N++ L ++ + + +LI + G LF +
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S + TS +K + G++Y+H ++ H +LK N++L P L
Sbjct: 107 AQKESLSEEEA--TSFIK---QILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 530 ADYCLTALTADSLQDDD----PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L D ++ + P+ + APE N ++D++S GV+ LL+G
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPE---FVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 216
Query: 586 P 586
P
Sbjct: 217 P 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 148 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 204 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 256
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 41/217 (18%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRL----------DASKLAGTSNEMYEQHMESVGGL 439
E LGKG+ + CVK L + KL+ ++ E+ L
Sbjct: 17 EELGKGAFSVVRR---------CVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFS-LIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
+HPN+V L + LI+D G LF ++ + A H C+ + + +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CI---QQILE 121
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADSLQD------DDPDN 549
+ + HQ +VH NLK N+LL + LAD+ L A+ + Q P
Sbjct: 122 AVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFAGTPG- 178
Query: 550 LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
Y +PE D+++ GV+L LL G PP
Sbjct: 179 --YLSPEVLRKDPYG-KPVDLWACGVILYILLVGYPP 212
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 84/212 (39%), Gaps = 23/212 (10%)
Query: 392 LGKGSLGTTYKAVLDNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG+GS G ++ C VK++ + + + GL P +VPL
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-------EELMACAGLTSPRIVPLYGA 134
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ + + GSL L+ K P L +GL Y+H R++
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLV---KEQGCLPE--DRALYYLGQALEGLEYLHSR-RIL 188
Query: 511 HGNLKSSNVLLGPD-FEACLADY----CLT--ALTADSLQDDD-PDNLLYKAPETRNASH 562
HG++K+ NVLL D A L D+ CL L D L D P + APE
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV-VLGR 247
Query: 563 QATSKSDVYSFGVLLLELLTGKPPSQHSFLVP 594
+K DV+S ++L +L G P F P
Sbjct: 248 SCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 279
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 45/209 (21%)
Query: 392 LGKGSLGTTYK--AVLDNRLIVCVKRLD--------ASKLAGTSNEMYEQHMESVGGLRH 441
LG GS G +K + D RL + + A KLA + E VG +H
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSH------EKVG--QH 116
Query: 442 PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAE------D 495
P V L QA EE ++Y L + + G S + W + L A+ D
Sbjct: 117 PCCVRLE---QAWEEGGILY-------LQTELCGP-SLQQHCEAWGASLPEAQVWGYLRD 165
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYC----LTALTADSLQDDDPDNLL 551
L+++H + LVH ++K +N+ LGP L D+ L A +Q+ DP
Sbjct: 166 TLLALAHLH-SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR--- 221
Query: 552 YKAPETRNASHQATSKSDVYSFGVLLLEL 580
Y APE S+ + +DV+S G+ +LE+
Sbjct: 222 YMAPELLQGSY--GTAADVFSLGLTILEV 248
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 31/248 (12%)
Query: 351 LQEKVKRAQGIQVAKSGN------LVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAV 404
++EK K ++ ++ N ++ C + + Y L + ++ LL K T
Sbjct: 23 VKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKS---LLEKKRDFTK---- 75
Query: 405 LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQ 464
N + +K SK NE+ + + +++ + +E +IY+Y
Sbjct: 76 -SNNDKISIK----SKYDDFKNEL-----QIITDIKNEYCLTCEGIITNYDEVYIIYEYM 125
Query: 465 PNGSL-----FSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNV 519
N S+ + + T P+ C I + V SYIH + H ++K SN+
Sbjct: 126 ENDSILKFDEYFFVLDKNYTCFIPIQVIKC--IIKSVLNSFSYIHNEKNICHRDVKPSNI 183
Query: 520 LLGPDFEACLADYCLTALTADSLQDDDPDNLLYKAPE-TRNASHQATSKSDVYSFGVLLL 578
L+ + L+D+ + D + PE N S +K D++S G+ L
Sbjct: 184 LMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
Query: 579 ELLTGKPP 586
+ P
Sbjct: 244 VMFYNVVP 251
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 157 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 213 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 265
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 148 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 204 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 256
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 307
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 39/256 (15%)
Query: 349 NELQEKVKRAQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTT----YKAV 404
N ++ VK+ +G+Q+ +A+ Y + +++G+G+ G +KA
Sbjct: 58 NRYEKIVKKIRGLQM-----------KAEDYDV-------VKVIGRGAFGEVQLVRHKA- 98
Query: 405 LDNRLIVCVKRLDASKLAGTSNE-MYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDY 463
++ + +K L ++ S+ + + + + P +V L FQ + ++ +Y
Sbjct: 99 --SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEY 156
Query: 464 QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGP 523
P G L +L+ S P W +V L IH L+H ++K N+LL
Sbjct: 157 MPGGDLVNLM----SNYDVPEKWAKFY--TAEVVLALDAIHSM-GLIHRDVKPDNMLLDK 209
Query: 524 DFEACLADY--CLTALTADSLQDD----DPDNLLYKAPETRNASHQATSKSDVYSFGVLL 577
LAD+ C+ + D PD + + +++ + D +S GV L
Sbjct: 210 HGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL 269
Query: 578 LELLTGKPPSQHSFLV 593
E+L G P LV
Sbjct: 270 FEMLVGDTPFYADSLV 285
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
+ P L L + FQ + + +Y G L + H + + K + A +++ G
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKE---PQAVFYAAEISIG 132
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD--------DPDNLL 551
L ++H+ +++ +LK NV+L + +AD+ + + + D PD
Sbjct: 133 LFFLHKRG-IIYRDLKLDNVMLDSEGHIKIADF---GMCKEHMMDGVTTREFCGTPD--- 185
Query: 552 YKAPETRNASHQATSKS-DVYSFGVLLLELLTGKPP 586
Y APE ++Q KS D +++GVLL E+L G+PP
Sbjct: 186 YIAPEI--IAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR + G S E E+ + + + H N++ L ++ + + +LI + G LF +
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S + TS +K + G++Y+H ++ H +LK N++L P L
Sbjct: 107 AQKESLSEEEA--TSFIK---QILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 530 ADYCLTALTADSLQDDD----PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L D ++ + P+ + APE N ++D++S GV+ LL+G
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPE---FVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 216
Query: 586 P 586
P
Sbjct: 217 P 217
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 157 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 213 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 265
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR + G S E E+ + + + H N++ L ++ + + +LI + G LF +
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S + TS +K + G++Y+H ++ H +LK N++L P L
Sbjct: 107 AQKESLSEEEA--TSFIK---QILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 530 ADYCLTALTADSLQDDD----PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L D ++ + P+ + APE N ++D++S GV+ LL+G
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPE---FVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 216
Query: 586 P 586
P
Sbjct: 217 P 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 157 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 213 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 265
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 194 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 250 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 302
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 303 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 353
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 23/160 (14%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 200 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 256 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 308
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKML 643
+G A D + + + C P QRPT ++++ L
Sbjct: 309 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 23/160 (14%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 202 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 258 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 310
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKML 643
+G A D + + + C P QRPT ++++ L
Sbjct: 311 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 157 VAKGMEFL-ASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 213 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 265
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 376 AQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMYE 430
A L L + ++LG G+ GT YK + ++ V +K L + + E+ +
Sbjct: 1 ALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD 60
Query: 431 QHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCL 490
+ + + +P++ L +L I P G L + K C+
Sbjct: 61 EAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN- 549
+IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 119 QIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 550 ---LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 174 KVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 208
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 414 KRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI 473
KR + G S E E+ + + + H N++ L ++ + + +LI + G LF +
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 474 HGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL----GPDFEACL 529
+S + TS +K + G++Y+H ++ H +LK N++L P L
Sbjct: 107 AQKESLSEEEA--TSFIK---QILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 530 ADYCLTALTADSLQDDD----PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
D+ L D ++ + P+ + APE N ++D++S GV+ LL+G
Sbjct: 161 IDFGLAHEIEDGVEFKNIFGTPE---FVAPEIVNYEPLGL-EADMWSIGVITYILLSGAS 216
Query: 586 P 586
P
Sbjct: 217 P 217
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 23/160 (14%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 153 VAKGMEFL-ASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 209 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 261
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKML 643
+G A D + + + C P QRPT ++++ L
Sbjct: 262 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 157 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 213 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 265
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 34/281 (12%)
Query: 383 QLMRASAEL---LGKGSLGTTYKAVL---DNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
++ R EL +G+G G ++ + +N + + + + + E + Q ++
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
HP++V L + +I + G L S + R L S + A +
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQL 120
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLL---YK 553
+ L+Y+ R VH ++ + NVL+ L D+ L+ DS L +
Sbjct: 121 STALAYLESK-RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSAREDDGAED 612
APE+ N + TS SDV+ FGV + E+L G P Q + N+++ R ++G
Sbjct: 180 APESINF-RRFTSASDVWMFGVCMWEILMHGVKPFQG--VKNNDVI-----GRIENG--- 228
Query: 613 ERLGM-------LLEVAIACNSASPEQRPTMWQVLKMLQEI 646
ERL M L + C + P +RP ++ L I
Sbjct: 229 ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 383 QLMRASAELLGKGSLGTTYKAVLDNRLIV----CVKRLDASKLAGTSNEMYEQHMESVGG 438
Q M E LGKG+ + V +++ K ++ KL+ ++ E+
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCV---KVLAGQEYAAKIINTKKLSARDHQKLEREARICRL 77
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFS-LIHGSKSTRAKPLHWTSCLKIAEDVA 497
L+HPN+V L + LI+D G LF ++ + A H C+ + +
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CI---QQIL 131
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADSLQD------DDPD 548
+ + + HQ +VH +LK N+LL + LAD+ L A+ + Q P
Sbjct: 132 EAVLHCHQM-GVVHRDLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFAGTPG 189
Query: 549 NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
Y +PE D+++ GV+L LL G PP
Sbjct: 190 ---YLSPEVLRKDPYGKP-VDLWACGVILYILLVGYPP 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 26/231 (11%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LG G G + + D V +K+ +L+ + E + ++ + L HPN+V R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 449 AYFQAKEE------RLLIYDYQPNGSLFSLIHGSKST---RAKPLHWTSCLKIAEDVAQG 499
++ LL +Y G L ++ ++ + P+ + D++
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSA 134
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYC----LTALTADSLQDDDPDNLLYKAP 555
L Y+H+ R++H +LK N++L P + + L L + L Y AP
Sbjct: 135 LRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE 606
E + T D +SFG L E +TG P FL + + W RE
Sbjct: 194 ELLEQK-KYTVTVDYWSFGTLAFECITGFRP----FLPNWQPVQWHGKVRE 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 26/231 (11%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LG G G + + D V +K+ +L+ + E + ++ + L HPN+V R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 449 AYFQAKEE------RLLIYDYQPNGSLFSLIHGSKST---RAKPLHWTSCLKIAEDVAQG 499
++ LL +Y G L ++ ++ + P+ + D++
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSA 133
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYC----LTALTADSLQDDDPDNLLYKAP 555
L Y+H+ R++H +LK N++L P + + L L + L Y AP
Sbjct: 134 LRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSARE 606
E + T D +SFG L E +TG P FL + + W RE
Sbjct: 193 ELLEQK-KYTVTVDYWSFGTLAFECITGFRP----FLPNWQPVQWHGKVRE 238
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 23/171 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 159 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 215 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 267
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEIKGAVLMED 654
+G A D + + + C P QRPT ++++ L + A +D
Sbjct: 268 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 318
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 23/160 (14%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 207 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 263 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 315
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKML 643
+G A D + + + C P QRPT ++++ L
Sbjct: 316 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 23/160 (14%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL E + C L D +D D
Sbjct: 209 VAKGMEFL-ASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 265 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRRLK 317
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKML 643
+G A D + + + C P QRPT ++++ L
Sbjct: 318 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 35/218 (16%)
Query: 392 LGKGSLGTTYKAVLDNRLIVC-VK--RLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+G+GS G ++ C VK RL+ ++ + + + GL P +VPL
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV---------EELVACAGLSSPRIVPLY 116
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ + + GSL LI + L L +GL Y+H R
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTR-R 170
Query: 509 LVHGNLKSSNVLLGPDF-EACLADY----CL-------TALTADSLQDDDPDNLLYKAPE 556
++HG++K+ NVLL D A L D+ CL + LT D + P + APE
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI----PGTETHMAPE 226
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP 594
+K D++S ++L +L G P F P
Sbjct: 227 VVMGK-PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 35/218 (16%)
Query: 392 LGKGSLGTTYKAVLDNRLIVC-VK--RLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+G+GS G ++ C VK RL+ ++ + + + GL P +VPL
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV---------EELVACAGLSSPRIVPLY 132
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
+ + + GSL LI + L L +GL Y+H R
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTR-R 186
Query: 509 LVHGNLKSSNVLLGPD-FEACLADY----CL-------TALTADSLQDDDPDNLLYKAPE 556
++HG++K+ NVLL D A L D+ CL + LT D + P + APE
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI----PGTETHMAPE 242
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP 594
+K D++S ++L +L G P F P
Sbjct: 243 VVMGK-PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 279
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
LRHPN+V + ++ +Y G LF I + + +ED A+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-------------CNAGRFSEDEAR 118
Query: 499 --------GLSYIHQAWRLVHGNLKSSNVLL----GPDFEACLADYCLTALTADSLQDDD 546
G+SY H A ++ H +LK N LL P + C Y + S+
Sbjct: 119 FFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICAFGY-----SKSSVLHSQ 172
Query: 547 PDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR 602
P + + Y APE +DV+S GV L +L G P F P E N+ +
Sbjct: 173 PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP----FEDPEEPKNFRK 228
Query: 603 S 603
+
Sbjct: 229 T 229
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 29/237 (12%)
Query: 358 AQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVC 412
A GI+ ++ N +A L L + ++LG G+ GT YK + ++ V
Sbjct: 2 AMGIRSGEAPN------QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 55
Query: 413 VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSL 472
+K L + + E+ ++ + + +P++ L +L I P G L
Sbjct: 56 IKELREATSPKANKEILDEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDY 113
Query: 473 IHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY 532
+ K C++IA +G++Y+ RLVH +L + NVL+ + D+
Sbjct: 114 VREHKDNIGSQYLLNWCVQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 168
Query: 533 CLTALTADSLQDDDPDN----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
L ++ + + + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 169 GRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 29/237 (12%)
Query: 358 AQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVC 412
A GI+ ++ N +A L L + ++L G+ GT YK + ++ V
Sbjct: 2 AMGIRSGEAPN------QALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVA 55
Query: 413 VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSL 472
+K L + + E+ ++ + + +P++ L +L I P G L
Sbjct: 56 IKELREATSPKANKEILDEAY-VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDY 113
Query: 473 IHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY 532
+ K C++IA +G++Y+ RLVH +L + NVL+ + D+
Sbjct: 114 VREHKDNIGSQYLLNWCVQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 168
Query: 533 CLTALTADSLQDDDPDN----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
L L ++ + + + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 169 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 29/237 (12%)
Query: 358 AQGIQVAKSGNLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVC 412
A GI+ ++ N +A L L + ++L G+ GT YK + ++ V
Sbjct: 2 AMGIRSGEAPN------QALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVA 55
Query: 413 VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSL 472
+K L + + E+ ++ + + +P++ L +L I P G L
Sbjct: 56 IKELREATSPKANKEILDEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDY 113
Query: 473 IHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY 532
+ K C++IA +G++Y+ RLVH +L + NVL+ + D+
Sbjct: 114 VREHKDNIGSQYLLNWCVQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDF 168
Query: 533 CLTALTADSLQDDDPDN----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
L L ++ + + + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 169 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 221
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
L +IH S+ PL + +GL Y+H A +++H +LK SN+L+ +
Sbjct: 142 ESDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENC 195
Query: 526 EACLADY------CLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLE 579
E + D+ C + + Y+APE + H+ T D++S G + E
Sbjct: 196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 255
Query: 580 LLTGK 584
+L +
Sbjct: 256 MLARR 260
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 82 VVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPD-LSGLVNLKSLFLDHNFF 140
++L +LG I + +L L L L+ N LTG P+ G +++ L L N
Sbjct: 31 TTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI 90
Query: 141 TGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFN 189
L LH+LKTL+L N +S +P L SL L N FN
Sbjct: 91 KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 466 NGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDF 525
L +IH S+ PL + +GL Y+H A +++H +LK SN+L+ +
Sbjct: 143 ESDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENC 196
Query: 526 EACLADY------CLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLE 579
E + D+ C + + Y+APE + H+ T D++S G + E
Sbjct: 197 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 256
Query: 580 LLTGK 584
+L +
Sbjct: 257 MLARR 261
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
LRHPN+V + ++ +Y G LF I + + +ED A+
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-------------CNAGRFSEDEAR 117
Query: 499 --------GLSYIHQAWRLVHGNLKSSNVLL----GPDFEACLADYCLTALTADSLQDDD 546
G+SY H A ++ H +LK N LL P + C Y + S+
Sbjct: 118 FFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGY-----SKSSVLHSQ 171
Query: 547 PDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR 602
P + + Y APE +DV+S GV L +L G P F P E N+ +
Sbjct: 172 PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP----FEDPEEPKNFRK 227
Query: 603 S 603
+
Sbjct: 228 T 228
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 68 DEAY-VMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L ++ +
Sbjct: 126 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 181 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 216
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
LRHPN+V + ++ +Y G LF I + + +ED A+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-------------CNAGRFSEDEAR 118
Query: 499 --------GLSYIHQAWRLVHGNLKSSNVLL----GPDFEACLADYCLTALTADSLQDDD 546
G+SY H A ++ H +LK N LL P + C Y + S+
Sbjct: 119 FFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGY-----SKSSVLHSQ 172
Query: 547 PDNLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR 602
P + + Y APE +DV+S GV L +L G P F P E N+ +
Sbjct: 173 PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP----FEDPEEPKNFRK 228
Query: 603 S 603
+
Sbjct: 229 T 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 85/216 (39%), Gaps = 31/216 (14%)
Query: 392 LGKGSLGTTYKAVLDNRLIVC-VKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY 450
LG+GS G ++ C VK++ + + + GL P +VPL
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-------EELMACAGLTSPRIVPLYGA 153
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLV 510
+ + + GSL L+ K P L +GL Y+H R++
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLV---KEQGCLPE--DRALYYLGQALEGLEYLHSR-RIL 207
Query: 511 HGNLKSSNVLLGPD-FEACLADY----CL-------TALTADSLQDDDPDNLLYKAPETR 558
HG++K+ NVLL D A L D+ CL + LT D + P + APE
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI----PGTETHMAPEV- 262
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVP 594
+K DV+S ++L +L G P F P
Sbjct: 263 VLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP 298
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 10 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 69
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L++ P G L + K C
Sbjct: 70 DEAY-VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWC 127
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L ++ +
Sbjct: 128 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 183 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L++ P G L + K C
Sbjct: 68 DEAY-VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L ++ +
Sbjct: 126 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 181 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 114/289 (39%), Gaps = 46/289 (15%)
Query: 389 AELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQ--HMESVGGLR 440
+ LG G+ G +A D L V VK L ++ A + + M +G +
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG--Q 108
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSK----STRAKPLH-------WTSC 489
H N+V L L+I +Y G L + + + P H
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDD--- 546
L + VAQG++++ +H ++ + NVLL A + D+ L D + D +
Sbjct: 169 LHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHVAKIGDF---GLARDIMNDSNYIV 224
Query: 547 ------PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
P + + APE+ T +SDV+S+G+LL E+ + LV ++
Sbjct: 225 KGNARLP--VKWMAPESI-FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 281
Query: 601 VRSAREDDGAEDERLGM----LLEVAIACNSASPEQRPTMWQVLKMLQE 645
V+ DG + + + + AC + P RPT Q+ LQE
Sbjct: 282 VK-----DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 34/161 (21%)
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ----- 498
+ L FQ + L+ DY G L +L+ + K+ ED+A+
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED------------KLPEDMARFYIGE 199
Query: 499 ---GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDD----DPDN 549
+ IHQ VH ++K NVLL + LAD+ CL ++Q PD
Sbjct: 200 MVLAIDSIHQL-HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD- 257
Query: 550 LLYKAPETRNASHQATSK----SDVYSFGVLLLELLTGKPP 586
Y +PE A K D +S GV + E+L G+ P
Sbjct: 258 --YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 21/216 (9%)
Query: 389 AELLGKGSLGTT----YKAVLDNRLIVCVKRLDASKLAGTSNE-MYEQHMESVGGLRHPN 443
+++G+G+ G +K+ R + +K L ++ S+ + + + + P
Sbjct: 79 VKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+V L FQ ++ +Y P G L +L+ +T+ + +A D + +I
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDD----DPDNLLYKAPET 557
H+ ++K N+LL LAD+ C+ ++ D PD + + ++
Sbjct: 196 HR-------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV 593
+ + D +S GV L E+L G P LV
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 66 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L ++ +
Sbjct: 124 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 178
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 179 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 34/161 (21%)
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ----- 498
+ L FQ + L+ DY G L +L+ + K+ ED+A+
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED------------KLPEDMARFYIGE 183
Query: 499 ---GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDD----DPDN 549
+ IHQ VH ++K NVLL + LAD+ CL ++Q PD
Sbjct: 184 MVLAIDSIHQL-HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD- 241
Query: 550 LLYKAPETRNASHQATSK----SDVYSFGVLLLELLTGKPP 586
Y +PE A K D +S GV + E+L G+ P
Sbjct: 242 --YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 81/209 (38%), Gaps = 24/209 (11%)
Query: 391 LLGKGSLGTTYKA-VLDNRLIVCVKRLDASKLAGTSN---EMYEQHMESVGGLRHPNLVP 446
+LGKGS G A V + + VK L + + M E+ + S+ HP L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA-RNHPFLTQ 88
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
L FQ + + ++ G L + H KS R A ++ L ++H
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRR---FDEARARFYAAEIISALMFLHDK 143
Query: 507 WRLVHGNLKSSNVLLG-------PDFEACLADYCLTALTADSLQDDDPDNLLYKAPETRN 559
+++ +LK NVLL DF C C TA D Y APE
Sbjct: 144 -GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD-----YIAPEILQ 197
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPPSQ 588
+ D ++ GVLL E+L G P +
Sbjct: 198 EMLYGPA-VDWWAMGVLLYEMLCGHAPFE 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V + L + + E+
Sbjct: 40 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEIL 99
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 100 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 157
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 158 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 212
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 213 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 248
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 21/216 (9%)
Query: 389 AELLGKGSLGTT----YKAVLDNRLIVCVKRLDASKLAGTSNE-MYEQHMESVGGLRHPN 443
+++G+G+ G +K+ R + +K L ++ S+ + + + + P
Sbjct: 79 VKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+V L FQ ++ +Y P G L +L+ +T+ + +A D + +I
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDD----DPDNLLYKAPET 557
H+ ++K N+LL LAD+ C+ ++ D PD + + ++
Sbjct: 196 HR-------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV 593
+ + D +S GV L E+L G P LV
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++LG G+ GT YK + ++ V +K L + + E+
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 68 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 125
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L ++ +
Sbjct: 126 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 181 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 216
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 35/179 (19%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ 498
LRHPN+V + ++ +Y G LF I + + +ED A+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI-------------CNAGRFSEDEAR 118
Query: 499 --------GLSYIHQAWRLVHGNLKSSNVLL--GPDFEACLADYCLTALTADSLQDDDPD 548
G+SY H A ++ H +LK N LL P +AD+ + S+ P
Sbjct: 119 FFFQQLISGVSYAH-AMQVAHRDLKLENTLLDGSPAPRLKIADF---GYSKASVLHSQPK 174
Query: 549 NLL----YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRS 603
+ + Y APE +DV+S GV L +L G P F P E N+ ++
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP----FEDPEEPKNFRKT 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 21/216 (9%)
Query: 389 AELLGKGSLGTT----YKAVLDNRLIVCVKRLDASKLAGTSNE-MYEQHMESVGGLRHPN 443
+++G+G+ G +K+ R + +K L ++ S+ + + + + P
Sbjct: 74 VKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+V L FQ ++ +Y P G L +L+ +T+ + +A D + +I
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 190
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDD----DPDNLLYKAPET 557
H+ ++K N+LL LAD+ C+ ++ D PD + + ++
Sbjct: 191 HR-------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLV 593
+ + D +S GV L E+L G P LV
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVL-----DNRLIVCVKRLDASKLAGTSNEMY 429
+A L L + ++L G+ GT YK + ++ V +K L + + E+
Sbjct: 6 QALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 430 EQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSC 489
++ + + +P++ L +L I P G L + K C
Sbjct: 66 DEAY-VMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWC 123
Query: 490 LKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN 549
++IA +G++Y+ RLVH +L + NVL+ + D+ L L ++ +
Sbjct: 124 VQIA----KGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
Query: 550 ----LLYKAPET---RNASHQATSKSDVYSFGVLLLELLT 582
+ + A E+ R +HQ SDV+S+GV + EL+T
Sbjct: 179 GKVPIKWMALESILHRIYTHQ----SDVWSYGVTVWELMT 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 439 LRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLI--HGSKSTRAKPLHWTSCLKIAEDV 496
L HPN++ L+ F+ E L+ + G LF I G S R + +
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER-------DAADAVKQI 157
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTALTADS-LQDDDPDNLLY 552
+ ++Y+H+ +VH +LK N+L PD +AD+ L+ + L Y
Sbjct: 158 LEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGY 216
Query: 553 KAPET-RNASHQATSKSDVYSFGVLLLELLTGKPP 586
APE R ++ + D++S G++ LL G P
Sbjct: 217 CAPEILRGCAY--GPEVDMWSVGIITYILLCGFEP 249
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 12/171 (7%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSA 117
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H +V+ ++K N++L D + D+ C ++ + Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 177 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 23/160 (14%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN------ 549
VA+G+ ++ + + +H +L + N+LL + D+ L D +D D
Sbjct: 153 VAKGMEFL-ASRKXIHRDLAARNILLSEKNVVKIXDF---GLARDIYKDPDYVRKGDARL 208
Query: 550 -LLYKAPETRNASHQATSKSDVYSFGVLLLELLT-GKPPSQHSFLVPNEMMNWVRSARED 607
L + APET T +SDV+SFGVLL E+ + G P P ++ R
Sbjct: 209 PLKWMAPET-IFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFXRRLK 261
Query: 608 DG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKML 643
+G A D + + + C P QRPT ++++ L
Sbjct: 262 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSA 117
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H + +V+ ++K N++L D + D+ C ++ + Y APE
Sbjct: 118 LEYLH-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 177 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 34/211 (16%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYF 451
L + G +K IV VK L + + + + + HPN++P+
Sbjct: 18 LNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 452 QAKE--ERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRL 509
Q+ LI + P GSL++++H + + +K A D A+G +++H L
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQ---SQAVKFALDXARGXAFLHTLEPL 133
Query: 510 VHGN-LKSSNVLLGPD-------------FEACLADYCLTALTADSLQDDDPDNLLYKAP 555
+ + L S +V + D F++ Y + ++LQ K P
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQ---------KKP 184
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
E N +D +SF VLL EL+T + P
Sbjct: 185 EDTN-----RRSADXWSFAVLLWELVTREVP 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSA 117
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H + +V+ ++K N++L D + D+ C ++ + Y APE
Sbjct: 118 LEYLH-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 177 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 12/171 (7%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSA 122
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H +V+ ++K N++L D + D+ C ++ + Y APE
Sbjct: 123 LEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 181
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 182 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSA 120
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H + +V+ ++K N++L D + D+ C ++ + Y APE
Sbjct: 121 LEYLH-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 179
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 180 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 229
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 12/171 (7%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSA 117
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H +V+ ++K N++L D + D+ C ++ + Y APE
Sbjct: 118 LEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 177 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
RHP L L+ FQ + + +Y G LF + +R + ++
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSA 117
Query: 500 LSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--CLTALTADSLQDDDPDNLLYKAPET 557
L Y+H + +V+ ++K N++L D + D+ C ++ + Y APE
Sbjct: 118 LEYLH-SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGKPP---SQHSFLVPNEMMNWVRSAR 605
+ + D + GV++ E++ G+ P H L +M +R R
Sbjct: 177 LEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGT----SNEMYEQHMESVGGLRHPNLV 445
E LG G+ G ++ V R+ +K T + + + L HP L+
Sbjct: 57 EELGSGAFGVVHRCVEK-----ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLI 111
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
L F+ K E +LI ++ G LF I ++ + +GL ++H+
Sbjct: 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE----AEVINYMRQACEGLKHMHE 167
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLA--DYCL-TALTADSLQDDDPDNLLYKAPETRNASH 562
+VH ++K N++ + + D+ L T L D + + APE +
Sbjct: 168 H-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD-RE 225
Query: 563 QATSKSDVYSFGVLLLELLTGKPP 586
+D+++ GVL LL+G P
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ ++
Sbjct: 41 LDQFERIRT--LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQ- 97
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 98 -AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 151
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ +AD+ P+ Y A
Sbjct: 152 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE---YLA 207
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 208 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + + N +
Sbjct: 166 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK 224
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 225 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 274
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 275 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-------ALTADSLQDDDPDNL 550
+GL ++H + R+VH +LK N+L+ + LAD+ L ALT+ + L
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV------TL 183
Query: 551 LYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
Y+APE S AT D++S G + E+ KP
Sbjct: 184 WYRAPEVLLQSSYATP-VDLWSVGCIFAEMFRRKP 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-------ALTADSLQDDDPDNL 550
+GL ++H + R+VH +LK N+L+ + LAD+ L ALT+ + L
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV------TL 183
Query: 551 LYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
Y+APE S AT D++S G + E+ KP
Sbjct: 184 WYRAPEVLLQSSYATP-VDLWSVGCIFAEMFRRKP 217
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 33/211 (15%)
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
LR Y +A+ + Y Y N + + + + +A+G+ Y+
Sbjct: 128 LREYLRARRPPGMEYSYDIN-----------RVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LLYKAPET---RN 559
+ +H +L + NVL+ + +AD+ L + N + + APE R
Sbjct: 177 -KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 560 ASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSAREDDGAED--ERL 615
+HQ SDV+SFGVL+ E+ T G P + + E+ ++ D + L
Sbjct: 236 YTHQ----SDVWSFGVLMWEIFTLGGSP---YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
Query: 616 GMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M++ C A P QRPT Q+++ L I
Sbjct: 289 YMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 22/162 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 166 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVK 224
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSARE 606
+ APE R +HQ SDV+SFGVL+ E+ T G P + + E+ ++
Sbjct: 225 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSP---YPGIPVEELFKLLKEGHR 277
Query: 607 DDGAED--ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
D + L M++ C A P QRPT Q+++ L I
Sbjct: 278 MDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-------ALTADSLQDDDPDNL 550
+GL ++H + R+VH +LK N+L+ + LAD+ L ALT+ + L
Sbjct: 131 RGLDFLH-SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV------TL 183
Query: 551 LYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
Y+APE S AT D++S G + E+ KP
Sbjct: 184 WYRAPEVLLQSSYATP-VDLWSVGCIFAEMFRRKP 217
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 39/278 (14%)
Query: 390 ELLGKGSLGTTYKAVLD--------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH 441
E LG+G+ +K V + V +K LD K +E + + + L H
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD--KAHRNYSESFFEAASMMSKLSH 71
Query: 442 PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
+LV +E +L+ ++ GSL + + +K+ + W L++A+ +A +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCIN--ILWK--LEVAKQLAAAMH 127
Query: 502 YIHQAWRLVHGNLKSSNVLL---------GPDFEACLAD--YCLTALTADSLQDDDPDNL 550
++ + L+HGN+ + N+LL P F L+D +T L D LQ+ P
Sbjct: 128 FLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGISITVLPKDILQERIP--- 182
Query: 551 LYKAPETRNASHQATSKSDVYSFGVLLLELLTG--KPPSQHSFLVPNEMMNWVRSAREDD 608
+ PE +D +SFG L E+ +G KP S L + + +
Sbjct: 183 -WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA---LDSQRKLQFYEDRHQLP 238
Query: 609 GAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
+ L L+ C P+ RP+ +++ L +
Sbjct: 239 APKAAELANLIN---NCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 25/209 (11%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E +GKG+ + V L K ++ KL+ ++ E+ L+H N+V L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 449 AYFQAKEERLLIYDYQPNGSLFS-LIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ L++D G LF ++ + A H C+ + + + + + HQ
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CI---QQILEAVLHCHQM- 122
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADSLQDDD------PDNLLYKAPETR 558
+VH +LK N+LL + LAD+ L A +Q D Y +PE
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGL----AIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 559 NASHQATSKS-DVYSFGVLLLELLTGKPP 586
+A K D+++ GV+L LL G PP
Sbjct: 179 RK--EAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + + +H +L + NVL+ + +AD+ L + N +
Sbjct: 212 LARGMEYL-ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 270
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKPPSQHSFLVPNEMMNWVRSARE 606
+ APE R +HQ SDV+SFGVL+ E+ T G P + + E+ ++
Sbjct: 271 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSP---YPGIPVEELFKLLKEGHR 323
Query: 607 DDGAED--ERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
D + L M++ C A P QRPT Q+++ L I
Sbjct: 324 MDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 153 LARGMEYLASQ-KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 211
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 212 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 261
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 262 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 47/231 (20%)
Query: 392 LGKGSLGTTYKAVLDNRL---IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
+G G+ G ++ ++L +V VK ++ +E ++ + + LRHPN+V +
Sbjct: 28 IGSGNFGVA--RLMRDKLTKELVAVKYIER---GAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 449 AYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQ--------GL 500
+I +Y G L+ I + + +ED A+ G+
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERICNAG-------------RFSEDEARFFFQQLLSGV 129
Query: 501 SYIHQAWRLVHGNLKSSNVLL----GPDFEACLADYCLTALTADSLQDDDPDNLL----Y 552
SY H + ++ H +LK N LL P + C Y + S+ P + + Y
Sbjct: 130 SYCH-SMQICHRDLKLENTLLDGSPAPRLKICDFGY-----SKSSVLHSQPKSTVGTPAY 183
Query: 553 KAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRS 603
APE +DV+S GV L +L G P F P E ++ ++
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP----FEDPEEPRDYRKT 230
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 31/213 (14%)
Query: 390 ELLGKGSLGTTYKAVLD--------NRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH 441
E LG+G+ +K V + V +K LD K +E + + + L H
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD--KAHRNYSESFFEAASMMSKLSH 71
Query: 442 PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLS 501
+LV +E +L+ ++ GSL + + +K+ + W L++A+ +A +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCIN--ILWK--LEVAKQLAWAMH 127
Query: 502 YIHQAWRLVHGNLKSSNVLL---------GPDFEACLAD--YCLTALTADSLQDDDPDNL 550
++ + L+HGN+ + N+LL P F L+D +T L D LQ+ P
Sbjct: 128 FLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGISITVLPKDILQERIP--- 182
Query: 551 LYKAPETRNASHQATSKSDVYSFGVLLLELLTG 583
+ PE +D +SFG L E+ +G
Sbjct: 183 -WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 155 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 213
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 214 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 263
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 264 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 166 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 225 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 274
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 275 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 166 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 225 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 274
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 275 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 166 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 225 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 274
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 275 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 158 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 216
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 217 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 266
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 267 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 35/168 (20%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN- 549
++ + + GL YIH+ +++H ++K++NVL+ D LAD+ L A SL + N
Sbjct: 129 RVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA--RAFSLAKNSQPNR 185
Query: 550 -------LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR 602
L Y+ PE D++ G ++ E+ W R
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-------------------WTR 226
Query: 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTM--WQVLKMLQEIKG 648
S E +L ++ ++ C S +PE P + +++ + L+ +KG
Sbjct: 227 SPIMQGNTEQHQLALISQL---CGSITPEVWPNVDNYELYEKLELVKG 271
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 32/212 (15%)
Query: 391 LLGKGSLGTTYKAVLDN----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
+LG+G G Y+ V N ++ V VK + E + + L HP++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
L + +E +I + P G L + +K++ L + + + + + ++Y+ ++
Sbjct: 90 LIGIIE-EEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICKAMAYL-ES 143
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKA-----------P 555
VH ++ N+L+ L D+ L+ ++D+D YKA P
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDFGLSRY----IEDED----YYKASVTRLPIKWMSP 195
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
E+ N + T+ SDV+ F V + E+L+ GK P
Sbjct: 196 ESINF-RRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 25/268 (9%)
Query: 392 LGKGSLGTTYKAV-LDNRLIVCVKR------LDASKLAGTSNEMYEQHMESVGGLRHPNL 444
+G+G Y+A L + + V +K+ +DA A E+ + + L HPN+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEI-----DLLKQLNHPNV 94
Query: 445 VPLRAYFQAKEERLLIYDYQPNGSLFSLI-HGSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+ A F E ++ + G L +I H K R P + K + L ++
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP--ERTVWKYFVQLCSALEHM 152
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCL-----TALTADSLQDDDPDNLLYKAPETR 558
H + R++H ++K +NV + L D L + TA P Y +PE R
Sbjct: 153 H-SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTP---YYMSPE-R 207
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGML 618
+ KSD++S G LL E+ + P + + + D L
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL 267
Query: 619 LEVAIACNSASPEQRPTMWQVLKMLQEI 646
++ C + PE+RP + V + + +
Sbjct: 268 RQLVNMCINPDPEKRPDVTYVYDVAKRM 295
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 166 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 225 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 274
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 275 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 166 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 225 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 274
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 275 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 35/168 (20%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN- 549
++ + + GL YIH+ +++H ++K++NVL+ D LAD+ L A SL + N
Sbjct: 128 RVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA--RAFSLAKNSQPNR 184
Query: 550 -------LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR 602
L Y+ PE D++ G ++ E+ W R
Sbjct: 185 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-------------------WTR 225
Query: 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTM--WQVLKMLQEIKG 648
S E +L ++ ++ C S +PE P + +++ + L+ +KG
Sbjct: 226 SPIMQGNTEQHQLALISQL---CGSITPEVWPNVDNYELYEKLELVKG 270
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 32/212 (15%)
Query: 391 LLGKGSLGTTYKAVLDN----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
+LG+G G Y+ V N ++ V VK + E + + L HP++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
L + +E +I + P G L + +K++ L + + + + + ++Y+ ++
Sbjct: 74 LIGIIE-EEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICKAMAYL-ES 127
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKA-----------P 555
VH ++ N+L+ L D+ L+ ++D+D YKA P
Sbjct: 128 INCVHRDIAVRNILVASPECVKLGDFGLSRY----IEDED----YYKASVTRLPIKWMSP 179
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
E+ N + T+ SDV+ F V + E+L+ GK P
Sbjct: 180 ESINF-RRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN----LL 551
+A+G+ Y+ + +H +L + NVL+ + +AD+ L + N +
Sbjct: 166 LARGMEYLASQ-KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVK 224
Query: 552 YKAPET---RNASHQATSKSDVYSFGVLLLELLT--GKP----PSQHSFLVPNEMMNWVR 602
+ APE R +HQ SDV+SFGVL+ E+ T G P P + F + E
Sbjct: 225 WMAPEALFDRVYTHQ----SDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE------ 274
Query: 603 SAREDDGAE-DERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
R D A L M++ C A P QRPT Q+++ L I
Sbjct: 275 GHRMDKPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 32/212 (15%)
Query: 391 LLGKGSLGTTYKAVLDN----RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
+LG+G G Y+ V N ++ V VK + E + + L HP++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTC-KKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQA 506
L + +E +I + P G L + +K++ L + + + + + ++Y+ ++
Sbjct: 78 LIGIIE-EEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICKAMAYL-ES 131
Query: 507 WRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDNLLYKA-----------P 555
VH ++ N+L+ L D+ L+ ++D+D YKA P
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLSRY----IEDED----YYKASVTRLPIKWMSP 183
Query: 556 ETRNASHQATSKSDVYSFGVLLLELLT-GKPP 586
E+ N + T+ SDV+ F V + E+L+ GK P
Sbjct: 184 ESINF-RRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 35/168 (20%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN- 549
++ + + GL YIH+ +++H ++K++NVL+ D LAD+ L A SL + N
Sbjct: 129 RVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA--RAFSLAKNSQPNR 185
Query: 550 -------LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR 602
L Y+ PE D++ G ++ E+ W R
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-------------------WTR 226
Query: 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTM--WQVLKMLQEIKG 648
S E +L ++ ++ C S +PE P + +++ + L+ +KG
Sbjct: 227 SPIMQGNTEQHQLALISQL---CGSITPEVWPNVDNYELYEKLELVKG 271
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 35/168 (20%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPDN- 549
++ + + GL YIH+ +++H ++K++NVL+ D LAD+ L A SL + N
Sbjct: 129 RVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA--RAFSLAKNSQPNR 185
Query: 550 -------LLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVR 602
L Y+ PE D++ G ++ E+ W R
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-------------------WTR 226
Query: 603 SAREDDGAEDERLGMLLEVAIACNSASPEQRPTM--WQVLKMLQEIKG 648
S E +L ++ ++ C S +PE P + +++ + L+ +KG
Sbjct: 227 SPIMQGNTEQHQLALISQL---CGSITPEVWPNVDNYELYEKLELVKG 271
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
H N++ L +F+ ++ L+++ GS+ S IH + + + + +DVA L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH-----KRRHFNELEASVVVQDVASAL 124
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEAC---LADYCLTA---LTADSLQDDDPDNLL--- 551
++H + H +LK N+L + + D+ L + L D P+ L
Sbjct: 125 DFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCG 183
Query: 552 ---YKAPETRNASHQATS----KSDVYSFGVLLLELLTGKPP 586
Y APE A + S + D++S GV+L LL+G PP
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 16/219 (7%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVV 68
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
+ + + L +Y G LF I +P + + G+ Y+H
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 123
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETRNAS 561
+ H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 124 I-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 562 HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LGKG+ + + + K ++ KL+ ++ E+ L+HPN+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 449 AYFQAKEERLLIYDYQPNGSLFS-LIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ L++D G LF ++ + A H C+ + + + +++ H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CI---QQILESVNHCHLN- 122
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADSLQDDD------PDNLLYKAPETR 558
+VH +LK N+LL + LAD+ L A +Q D Y +PE
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGL----AIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
D+++ GV+L LL G PP
Sbjct: 179 RKDPYGKP-VDMWACGVILYILLVGYPP 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 16/219 (7%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
+ + + L +Y G LF I +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETRNAS 561
+ H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 123 I-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 562 HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLR 448
E LGKG+ + + + K ++ KL+ ++ E+ L+HPN+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 449 AYFQAKEERLLIYDYQPNGSLFS-LIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAW 507
+ L++D G LF ++ + A H C+ + + + +++ H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CI---QQILESVNHCHLN- 122
Query: 508 RLVHGNLKSSNVLLGPDFEAC---LADYCLTALTADSLQDDD------PDNLLYKAPETR 558
+VH +LK N+LL + LAD+ L A +Q D Y +PE
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGL----AIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPP 586
D+++ GV+L LL G PP
Sbjct: 179 RKDPYGKP-VDMWACGVILYILLVGYPP 205
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 441 HPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
H N++ L +F+ ++ L+++ GS+ S IH + + + + +DVA L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH-----KRRHFNELEASVVVQDVASAL 124
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEAC---LADYCLTA---LTADSLQDDDPDNLL--- 551
++H + H +LK N+L + + D+ L + L D P+ L
Sbjct: 125 DFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 552 ---YKAPETRNASHQATS----KSDVYSFGVLLLELLTGKPP 586
Y APE A + S + D++S GV+L LL+G PP
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 22/110 (20%)
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADY--------------CL 534
CL I +A+ + ++H L+H +LK SN+ D + D+ L
Sbjct: 166 CLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 535 TALTADSLQDDDPDNLLYKAPET---RNASHQATSKSDVYSFGVLLLELL 581
T + A + LY +PE N SH K D++S G++L ELL
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSH----KVDIFSLGLILFELL 270
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 439 LRHPNLVPLRAYFQAKEE----RLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAE 494
HPN++ LR F EE +L + L +IH + P H +
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV-ISPQHIQYFMY--- 141
Query: 495 DVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDNLLYK 553
+ GL +H+A +VH +L N+LL + + + D+ L TAD+ + + Y+
Sbjct: 142 HILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYR 200
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGK 584
APE T D++S G ++ E+ K
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 10/151 (6%)
Query: 439 LRHPNLVPLRAYFQAKEE----RLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAE 494
HPN++ LR F EE +L + L +IH + P H +
Sbjct: 86 FHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV-ISPQHIQYFMY--- 141
Query: 495 DVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL-TADSLQDDDPDNLLYK 553
+ GL +H+A +VH +L N+LL + + + D+ L TAD+ + + Y+
Sbjct: 142 HILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYR 200
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGK 584
APE T D++S G ++ E+ K
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINAMLNHENVV 68
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 120
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 121 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ-DDDPDNLLYKAPE 556
+GL ++H A +VH +LK N+L+ LAD+ L + + + D L Y+APE
Sbjct: 123 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
S AT D++S G + E+ KP
Sbjct: 182 VLLQSTYATP-VDMWSVGCIFAEMFRRKP 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 16/219 (7%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQ 505
+ + + L +Y G LF I +P + + G+ Y+H
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM-PEP----DAQRFFHQLMAGVVYLHG 122
Query: 506 AWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETRNAS 561
+ H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 123 I-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 562 HQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 61 LDQFERIKT--LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 116
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 171
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 172 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 227
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 228 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 33 LDQFERIKT--LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 88
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPH---ARFYAAQI 143
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 144 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 199
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 200 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 33 LDQFERIKT--LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 88
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 143
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 144 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 199
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 200 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 96
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 151
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 152 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 207
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 208 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 96
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 151
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 152 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 207
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 208 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 35/235 (14%)
Query: 368 NLVFCAGEAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA----- 422
++F E + Y + + S ++LG G ++ +++ C R K A
Sbjct: 13 EVLFQGPEPKKYAVTDDYQLSKQVLGLG---------VNGKVLECFHRRTGQKCALKLLY 63
Query: 423 --GTSNEMYEQHMESVGGLRHPNLVPLRAYFQ----AKEERLLIYDYQPNGSLFSLIH-- 474
+ + + H ++ GG P++V + ++ K L+I + G LFS I
Sbjct: 64 DSPKARQEVDHHWQASGG---PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQER 120
Query: 475 GSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLAD 531
G ++ + +I D+ + ++H + + H ++K N+L D L D
Sbjct: 121 GDQAFTER-----EAAEIMRDIGTAIQFLH-SHNIAHRDVKPENLLYTSKEKDAVLKLTD 174
Query: 532 YCLTALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
+ T + Y APE S D++S GV++ LL G PP
Sbjct: 175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGFPP 228
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 96
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 151
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 152 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 207
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 208 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 19/175 (10%)
Query: 482 KPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA---LT 538
+P+ + + VA+G+ ++ + +H +L + N+LL + + D+ L
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 539 ADSLQDDDPD-NLLYKAPETRNASHQATSKSDVYSFGVLLLEL--LTGKPPSQHSFLVPN 595
D ++ D L + APE+ +T KSDV+S+GVLL E+ L G P P
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYST-KSDVWSYGVLLWEIFSLGGSP-------YPG 304
Query: 596 EMMNWVRSAREDDG----AEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQEI 646
M+ +R +G A + + ++ + C P++RP ++++ L ++
Sbjct: 305 VQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVKR--LDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
E +G+G+ GT +KA + IV +KR LD S+ + E + + L+H N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICL--LKELKHKNIVR 65
Query: 447 LRAYFQAKEERLLIYDY--QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
L + ++ L++++ Q F +G LK GL + H
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLK-------GLGFCH 118
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNASH 562
++H +LK N+L+ + E LAD+ L ++ + L Y+ P+ +
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 563 QATSKSDVYSFGVLLLELLTGKPP 586
++ D++S G + EL P
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARP 201
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 68
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 120
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 121 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 68
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 120
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 121 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 68
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 120
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 121 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 431 QHMESVGGLRHPNLVPLRAYFQAKEERL-------LIYDYQPNGSLFSLIHGSKSTRAKP 483
Q M+ + L HPN+V L++YF ER ++ +Y P+ + + A P
Sbjct: 68 QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPP 127
Query: 484 LHWTSCLKIAEDVAQGLSYIH-QAWRLVHGNLKSSNVLLG-PDFEACLADYCLTALTADS 541
+ + + +H + + H ++K NVL+ D L D+ +A
Sbjct: 128 PILIKVFLF--QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG----SAKK 181
Query: 542 LQDDDPD-----NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
L +P+ + Y+APE + T+ D++S G + E++ G+P
Sbjct: 182 LSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 68
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 120
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 121 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 96
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 151
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+++ + D+ P+ Y A
Sbjct: 152 VLTFEYLH-SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE---YLA 207
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 208 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 509 LVHGNLKSSNVLLGPDF-EACLADYCLTALTADSLQDDDPDNLLYKAPETRNASHQATSK 567
++H ++K N+L+ + E L D+ AL D++ D +Y PE
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 237
Query: 568 SDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNS 627
+ V+S G+LL +++ G P +H E++ R+ +E + L C +
Sbjct: 238 AAVWSLGILLYDMVCGDIPFEHD----EEIIRGQVFFRQRVSSECQHL------IRWCLA 287
Query: 628 ASPEQRPTMWQVLKMLQEIKGAVLMED 654
P RPT +EI+ M+D
Sbjct: 288 LRPSDRPT-------FEEIQNHPWMQD 307
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 12 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 68
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 120
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 121 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 10 VQTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 66
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 118
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 119 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 22/221 (9%)
Query: 390 ELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 13 QTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVK 69
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+ + + L +Y G LF I G A+ + + G+ Y+
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYL 121
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETRN 559
H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 122 HGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 22/221 (9%)
Query: 390 ELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 12 QTLGEGAYGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVK 68
Query: 447 LRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSYI 503
+ + + L +Y G LF I G A+ + + G+ Y+
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVYL 120
Query: 504 HQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETRN 559
H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 121 HGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 560 ASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 87/222 (39%), Gaps = 22/222 (9%)
Query: 389 AELLGKGSLGTTYKAVLDNRLI---VCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLV 445
+ LG+G+ G AV NR+ V VK +D K A E ++ + L H N+V
Sbjct: 11 VQTLGEGAAGEVQLAV--NRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVV 67
Query: 446 PLRAYFQAKEERLLIYDYQPNGSLFSLIH---GSKSTRAKPLHWTSCLKIAEDVAQGLSY 502
+ + + L +Y G LF I G A+ + + G+ Y
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ--------RFFHQLMAGVVY 119
Query: 503 IHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPETR 558
+H + H ++K N+LL ++D+ L + + L + L Y APE
Sbjct: 120 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNW 600
DV+S G++L +L G+ P E +W
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R +G GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ +AD+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 83/214 (38%), Gaps = 24/214 (11%)
Query: 390 ELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPN 443
E LG+ G YK L + V +K L K G E + L+HPN
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPN 90
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLI-----------HGSKSTRAKPLHWTSCLKI 492
+V L + +I+ Y +G L + T L + +
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL--TALTAD--SLQDDDPD 548
+A G+ Y+ + +VH +L + NVL+ ++D L AD L +
Sbjct: 151 VAQIAAGMEYL-SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 549 NLLYKAPETRNASHQATSKSDVYSFGVLLLELLT 582
+ + APE + + SD++S+GV+L E+ +
Sbjct: 210 PIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEVFS 242
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R +G GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ +AD+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 30/268 (11%)
Query: 390 ELLGKGSLGTTYKAVL------DNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPN 443
E LG+ G YK L + V +K L K G E + L+HPN
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPN 73
Query: 444 LVPLRAYFQAKEERLLIYDYQPNGSLFSLI-----------HGSKSTRAKPLHWTSCLKI 492
+V L + +I+ Y +G L + T L + +
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL--TALTAD--SLQDDDPD 548
+A G+ Y+ + +VH +L + NVL+ ++D L AD L +
Sbjct: 134 VAQIAAGMEYL-SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 549 NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTG--KPPSQHSFLVPNEMMNWVRSARE 606
+ + APE + + SD++S+GV+L E+ + +P +S EM+ R+
Sbjct: 193 PIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR----NRQ 247
Query: 607 DDGAEDERLGMLLEVAIACNSASPEQRP 634
D+ + + I C + P +RP
Sbjct: 248 VLPCPDDCPAWVYALMIECWNEFPSRRP 275
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD-DPD-----------NLLYKAPE 556
++H +LK SN+L+ + + + D+ L + +S D+ +P Y+APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
S + + DV+S G +L EL +P
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD-DPD-----------NLLYKAPE 556
++H +LK SN+L+ + + + D+ L + +S D+ +P Y+APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
S + + DV+S G +L EL +P
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDD-DPD-----------NLLYKAPE 556
++H +LK SN+L+ + + + D+ L + +S D+ +P Y+APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
S + + DV+S G +L EL +P
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRP 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 83/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R +G GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ +AD+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFF 140
K+ + L G L + A + L ++ L L + +T P L+GL NL+ L+LD N
Sbjct: 92 KITELELSGNPLKNVSA---IAGLQSIKTLDLTSTQITDVTP-LAGLSNLQVLYLDLNQI 147
Query: 141 TGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL 195
T P L L L+ L + N ++ P LA+ +L +LR D N+ I PL
Sbjct: 148 TNISP--LAGLTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKI-SDISPL 197
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G + ++ + + + KL + + E+ + +
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y P G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+++ + D+ L P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 27/113 (23%)
Query: 500 LSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDPDNLLYKAPE 556
L YIH+ VHG++K++N+LLG PD + LADY L+ P+ + E
Sbjct: 164 LEYIHEN-EYVHGDIKAANLLLGYKNPD-QVYLADYGLSYRYC-------PNGNHKQYQE 214
Query: 557 TRNASHQAT---------------SKSDVYSFGVLLLELLTGKPPSQHSFLVP 594
H T +SDV G +L L GK P + + P
Sbjct: 215 NPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH-------- 441
+++GKGS G KA D++ V + A K+ + Q E + L H
Sbjct: 103 KVIGKGSFGQVVKAY-DHK----VHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 442 -PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
N++ + F + + ++ + +L+ LI K + + K A + Q L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELL-SMNLYELI---KKNKFQGFSLPLVRKFAHSILQCL 213
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLA--DYCLTALTADSLQDDDPDNLLYKAPETR 558
+H+ R++H +LK N+LL + + D+ + + + Y+APE
Sbjct: 214 DALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTX-IQSRFYRAPEVI 271
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNE 596
+ D++S G +L ELLTG P L+P E
Sbjct: 272 LGARYGMP-IDMWSLGCILAELLTGYP------LLPGE 302
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K ++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+++ + D+ L
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 35/228 (15%)
Query: 375 EAQLYTLDQLMRASAELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLA-------GTSNE 427
E + Y + + S ++LG G ++ +++ C R K A + +
Sbjct: 1 EPKKYAVTDDYQLSKQVLGLG---------VNGKVLECFHRRTGQKCALKLLYDSPKARQ 51
Query: 428 MYEQHMESVGGLRHPNLVPLRAYFQ----AKEERLLIYDYQPNGSLFSLIH--GSKSTRA 481
+ H ++ GG P++V + ++ K L+I + G LFS I G ++
Sbjct: 52 EVDHHWQASGG---PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE 108
Query: 482 KPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALT 538
+ +I D+ + ++H + + H ++K N+L D L D+ T
Sbjct: 109 R-----EAAEIMRDIGTAIQFLH-SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 162
Query: 539 ADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
+ Y APE S D++S GV++ LL G PP
Sbjct: 163 TQNALQTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGFPP 209
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 390 ELLGKGSLGTTYKAV-LDNRLIVCVK--RLDASKLAGTSNEMYEQHMESVGGLRHPNLVP 446
E +G+G+ GT +KA + IV +K RLD S+ + E + + L+H N+V
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICL--LKELKHKNIVR 65
Query: 447 LRAYFQAKEERLLIYDY--QPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIH 504
L + ++ L++++ Q F +G LK GL + H
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLK-------GLGFCH 118
Query: 505 QAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQDDDPD--NLLYKAPETRNASH 562
+ ++H +LK N+L+ + E LA++ L ++ + L Y+ P+ +
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 563 QATSKSDVYSFGVLLLELL-TGKP 585
++ D++S G + EL G+P
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRP 201
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 26 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 78
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 79 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH--- 128
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 129 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT 187
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 188 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 93
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 94 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH--- 143
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 144 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 203 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 93
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 94 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH--- 143
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 144 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGT 202
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 203 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 29/218 (13%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH-------- 441
+++GKGS G KA D++ V + A K+ + Q E + L H
Sbjct: 103 KVIGKGSFGQVVKAY-DHK----VHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 442 -PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
N++ + F + + ++ + +L+ LI K + + K A + Q L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELL-SMNLYELI---KKNKFQGFSLPLVRKFAHSILQCL 213
Query: 501 SYIHQAWRLVHGNLKSSNVLLGPDFEACLA--DYCLTALTADSLQDDDPDNLLYKAPETR 558
+H+ R++H +LK N+LL + + D+ + + + Y+APE
Sbjct: 214 DALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI-QSRFYRAPEVI 271
Query: 559 NASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNE 596
+ D++S G +L ELLTG P L+P E
Sbjct: 272 LGARYGMP-IDMWSLGCILAELLTGYP------LLPGE 302
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 93
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 94 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPH--- 143
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 144 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 203 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLT-------ALTADSLQDDDPDNL 550
+GL ++H A +VH +LK N+L+ LAD+ L ALT + L
Sbjct: 131 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV------TL 183
Query: 551 LYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
Y+APE S AT D++S G + E+ KP
Sbjct: 184 WYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRKP 217
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+++ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADS---LQDDDPDNLL 551
VA+G++++ +H +L + N+LL + D+ L + DS ++ + +
Sbjct: 154 VAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 212
Query: 552 YKAPET-RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA 610
+ APE+ N + T +SDV+S+G+ L EL + V ++ ++
Sbjct: 213 WMAPESIFNCVY--TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 270
Query: 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
E M ++ C A P +RPT Q+++++++
Sbjct: 271 EHAPAEM-YDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+++ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL 521
KI + V QGL Y+H R++H ++K N+LL
Sbjct: 150 KIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADS---LQDDDPDNLL 551
VA+G++++ +H +L + N+LL + D+ L + DS ++ + +
Sbjct: 177 VAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK 235
Query: 552 YKAPET-RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA 610
+ APE+ N + T +SDV+S+G+ L EL + V ++ ++
Sbjct: 236 WMAPESIFNCVY--TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 293
Query: 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
E M ++ C A P +RPT Q+++++++
Sbjct: 294 EHAPAEM-YDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL 521
KI + V QGL Y+H R++H ++K N+LL
Sbjct: 134 KIIQQVLQGLDYLHTKCRIIHTDIKPENILL 164
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y P G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+++ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADS---LQDDDPDNLL 551
VA+G++++ +H +L + N+LL + D+ L + DS ++ + +
Sbjct: 172 VAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 230
Query: 552 YKAPET-RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA 610
+ APE+ N + T +SDV+S+G+ L EL + V ++ ++
Sbjct: 231 WMAPESIFNCVY--TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 288
Query: 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
E M ++ C A P +RPT Q+++++++
Sbjct: 289 EHAPAEM-YDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADS---LQDDDPDNLL 551
VA+G++++ +H +L + N+LL + D+ L + DS ++ + +
Sbjct: 177 VAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 235
Query: 552 YKAPET-RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA 610
+ APE+ N + T +SDV+S+G+ L EL + V ++ ++
Sbjct: 236 WMAPESIFNCVY--TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 293
Query: 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
E M ++ C A P +RPT Q+++++++
Sbjct: 294 EHAPAEM-YDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 496 VAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTA-LTADS---LQDDDPDNLL 551
VA+G++++ +H +L + N+LL + D+ L + DS ++ + +
Sbjct: 170 VAKGMAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 228
Query: 552 YKAPET-RNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNEMMNWVRSAREDDGA 610
+ APE+ N + T +SDV+S+G+ L EL + V ++ ++
Sbjct: 229 WMAPESIFNCVY--TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 286
Query: 611 EDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
E M ++ C A P +RPT Q+++++++
Sbjct: 287 EHAPAEM-YDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 129 NLKSLFLDHNFFTGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRF 188
++ L+LD N FT P L + L +DLS N +S + ++ +L +L L NR
Sbjct: 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
Query: 189 NGSIPPLN---QSSLKIFNVSGNNFT----GAITVTSTLSRFGISSFLFNPSLC 235
IPP SL++ ++ GN+ + GA S LS I + NP C
Sbjct: 91 R-CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGA---NPLYC 140
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ-DDDPDNLLYKAPE 556
+GL ++H A +VH +LK N+L+ LAD+ L + + + L Y+APE
Sbjct: 123 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
S AT D++S G + E+ KP
Sbjct: 182 VLLQSTYATP-VDMWSVGCIFAEMFRRKP 209
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ-DDDPDNLLYKAPE 556
+GL ++H A +VH +LK N+L+ LAD+ L + + + L Y+APE
Sbjct: 123 RGLDFLH-ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTGKP 585
S AT D++S G + E+ KP
Sbjct: 182 VLLQSTYATP-VDMWSVGCIFAEMFRRKP 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 29/220 (13%)
Query: 380 TLDQLMRASAELLGKGSLGTTYKAV--LDNRLIVCVKRL----DASKLAGTSNEMYEQHM 433
++D+ R + LG+G+ G YKA+ + N V +KR+ + + GT+ + +
Sbjct: 32 SIDRYRRITK--LGEGTYGEVYKAIDTVTNE-TVAIKRIRLEHEEEGVPGTAI----REV 84
Query: 434 ESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLK-I 492
+ L+H N++ L++ LI++Y N K P +K
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDL-------KKYMDKNPDVSMRVIKSF 137
Query: 493 AEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEA-----CLADYCLTALTADSLQDDDP 547
+ G+++ H R +H +LK N+LL + + D+ L ++
Sbjct: 138 LYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH 196
Query: 548 D--NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ L Y+ PE S ++ D++S + E+L P
Sbjct: 197 EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTP 236
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 43/225 (19%)
Query: 390 ELLGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRH-------- 441
+++GKG G KA D++ V + A K+ + Q E + L H
Sbjct: 103 KVIGKGXFGQVVKAY-DHK----VHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 442 -PNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQGL 500
N++ + F + + ++ + +L+ LI K + + K A + Q L
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELL-SMNLYELI---KKNKFQGFSLPLVRKFAHSILQCL 213
Query: 501 SYIHQAWRLVHGNLKSSNVLLGP---------DFEACLADYCLTALTADSLQDDDPDNLL 551
+H+ R++H +LK N+LL DF + ++ S
Sbjct: 214 DALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSR--------F 264
Query: 552 YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPSQHSFLVPNE 596
Y+APE + D++S G +L ELLTG P L+P E
Sbjct: 265 YRAPEVILGARYGMP-IDMWSLGCILAELLTGYP------LLPGE 302
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 61 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 116
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 171
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ + P+ Y A
Sbjct: 172 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE---YLA 227
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 228 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 100 SLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTLDL 159
++ K D L L L NSLT ++ L NL+ L L HN T S P L S +LK
Sbjct: 242 NIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300
Query: 160 SYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPLNQSSLKIFNVSGNNFTGAI 214
++N+ LP E + L L ++ N PL + LKI ++ + TG I
Sbjct: 301 -FDNMVTTLPWEFGNLCNLQFLGVEGN-------PLEKQFLKI--LTEKSVTGLI 345
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 93
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P L L F+ ++ +Y P G +FS H + R H
Sbjct: 94 -----RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH--- 143
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+++ + D+
Sbjct: 144 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 203 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 80/212 (37%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 27 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 82
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 83 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 137
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H L++ +LK N+L+ + D+ P+ Y A
Sbjct: 138 VLTFEYLHSL-DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 193
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 194 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 93
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P L L F+ ++ +Y P G +FS H + R H
Sbjct: 94 -----RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPH--- 143
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+++ + D+
Sbjct: 144 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 203 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 93 GGIFAPNSLTKLDQLRVLGLQNNSLTG-PIPDLSGLVNLKSLFLDHNFFTGSFPPSLL-S 150
GIF +L L L + +N L PI LVNL L LD N S PP + S
Sbjct: 78 AGIFK-----ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDS 131
Query: 151 LHRLKTLDLSYNNLSGPLPK 170
L +L L L YN L LPK
Sbjct: 132 LTKLTYLSLGYNELQS-LPK 150
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG-PDFEACLADYCLTALTADSLQDDDPDN 549
+I++ + GL Y+H+ ++H ++K NVL+ D L + L D+ N
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTN 194
Query: 550 LL----YKAPETRNASHQATSKSDVYSFGVLLLELLTG----KPPSQHSF 591
+ Y++PE + +D++S L+ EL+TG +P HS+
Sbjct: 195 SIQTREYRSPEVLLGAPWGCG-ADIWSTACLIFELITGDFLFEPDEGHSY 243
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 41 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 93
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P L L F+ ++ +Y P G +FS H + R H
Sbjct: 94 -----RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH--- 143
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+++ + D+
Sbjct: 144 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 203 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 101 LTKLDQLRVLGLQNNSLT---------GPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSL 151
L L++L +L LQ+N+L GPI L GL +L L L+ N F L
Sbjct: 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559
Query: 152 HRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186
LK +DL NNL+ +Q L SL L N
Sbjct: 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG-PDFEACLADYCLTALTADSLQDDDPDN 549
+I++ + GL Y+H+ ++H ++K NVL+ D L + L D+ N
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTN 194
Query: 550 LL----YKAPETRNASHQATSKSDVYSFGVLLLELLTG----KPPSQHSF 591
+ Y++PE + +D++S L+ EL+TG +P HS+
Sbjct: 195 SIQTREYRSPEVLLGAPWGCG-ADIWSTACLIFELITGDFLFEPDEGHSY 243
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 101 LTKLDQLRVLGLQNNSLT---------GPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSL 151
L L++L +L LQ+N+L GPI L GL +L L L+ N F L
Sbjct: 510 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 569
Query: 152 HRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186
LK +DL NNL+ +Q L SL L N
Sbjct: 570 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 604
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 101 LTKLDQLRVLGLQNNSLT---------GPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSL 151
L L++L +L LQ+N+L GPI L GL +L L L+ N F L
Sbjct: 505 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 564
Query: 152 HRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186
LK +DL NNL+ +Q L SL L N
Sbjct: 565 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 599
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 35 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 90
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 91 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---ARFYAAQI 145
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 146 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 201
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 202 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 489 CLK-IAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543
C+K I V QGL Y+H +++H ++K N+L+ C+ D + + A++ +
Sbjct: 141 CVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM------CVDDAYVRRMAAEATE 190
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 61 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 116
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---ARFYAAQI 171
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 172 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 227
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 228 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 41 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 96
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 151
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 152 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 207
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 208 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T +P
Sbjct: 119 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP 177
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 178 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 20/212 (9%)
Query: 381 LDQLMRASAELLGKGSLG----TTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESV 436
LDQ R LG GS G +K ++ + + + KL + + E+ + +
Sbjct: 40 LDQFDRIKT--LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI--L 95
Query: 437 GGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDV 496
+ P LV L F+ ++ +Y G +FS H + R H A +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---ARFYAAQI 150
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DDPDNLLYKA 554
Y+H + L++ +LK N+L+ + D+ P+ Y A
Sbjct: 151 VLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE---YLA 206
Query: 555 PETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
PE S D ++ GVL+ E+ G PP
Sbjct: 207 PEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 23/184 (12%)
Query: 483 PLHWTSCLKIAEDVAQGLSYIH-QAWRLVHGNLKSSNVLLGP-------DFEACLA---- 530
PL + LKI + + ++H Q ++H +LK N+LL DF +
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY 191
Query: 531 -DYCLTALTADSLQDDDPDNL--LYKAPETRN--ASHQATSKSDVYSFGVLLLELLTGKP 585
DY +A ++++ N +Y+ PE + ++ K D+++ G +L L
Sbjct: 192 PDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF--- 248
Query: 586 PSQHSFLVPNEMMNWVRSAREDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVLKMLQE 645
QH F ++ + + + D + + + A +PE+R ++ +V+ LQE
Sbjct: 249 -RQHPFEDGAKLR--IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE 305
Query: 646 IKGA 649
I A
Sbjct: 306 IAAA 309
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 90 LDLGGI--FAPNSLTKLDQLRVLGLQNNSLTGPIPD--LSGLVNLKSLFLDHNFFTGSFP 145
LD G+ P L L+ L LQ+N+L +PD L NL LFL N +
Sbjct: 111 LDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPE 169
Query: 146 PSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186
+ LH L L L N ++ P GRL +L L N
Sbjct: 170 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 210
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 99 NSLTKLDQLRVLGLQNNSLTG-PIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTL 157
++ L L L L N ++ P GL +L L L N P + L RL TL
Sbjct: 146 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 205
Query: 158 DLSYNNLSGPLPKE-LASQGRLYSLRLDVN 186
L NNLS LP E LA L LRL+ N
Sbjct: 206 YLFANNLSA-LPTEALAPLRALQYLRLNDN 234
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 81 KVVRVVLQGLDLGGIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFF 140
K+ + L G L + A + L ++ L L + +T P L+GL NL+ L+LD N
Sbjct: 86 KITELELSGNPLKNVSA---IAGLQSIKTLDLTSTQITDVTP-LAGLSNLQVLYLDLNQI 141
Query: 141 TGSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGSIPPL 195
T P L L L+ L + +S P LA+ +L +L+ D N+ I PL
Sbjct: 142 TNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI-SDISPL 191
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 90 LDLGGI--FAPNSLTKLDQLRVLGLQNNSLTGPIPD--LSGLVNLKSLFLDHNFFTGSFP 145
LD G+ P L L+ L LQ+N+L +PD L NL LFL N +
Sbjct: 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVPE 170
Query: 146 PSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186
+ LH L L L N ++ P GRL +L L N
Sbjct: 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Query: 99 NSLTKLDQLRVLGLQNNSLTG-PIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTL 157
++ L L L L N ++ P GL +L L L N P + L RL TL
Sbjct: 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206
Query: 158 DLSYNNLSGPLPKE-LASQGRLYSLRLDVN 186
L NNLS LP E LA L LRL+ N
Sbjct: 207 YLFANNLSA-LPTEALAPLRALQYLRLNDN 235
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 502 YIHQAWRLV---------HGNLKSSNVLLG-PDFEACLADYCLTALTADSLQDDDPD--- 548
YI+Q +R V H ++K N+L+ D L D+ +A L +P
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFG----SAKKLIPSEPSVAX 201
Query: 549 --NLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKP 585
+ Y+APE + + T D++S G + EL+ GKP
Sbjct: 202 ICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 98 PNSLTKLDQLRVLGLQNNSLTG-PIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKT 156
P+ LT + ++ L L NN +T DL VNL++L L N S SL L+
Sbjct: 47 PSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104
Query: 157 LDLSYN---NLSGPLPKELAS 174
LDLSYN NLS K L+S
Sbjct: 105 LDLSYNYLSNLSSSWFKPLSS 125
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 53/230 (23%)
Query: 391 LLGKGSLGTTYKAVLDN-RLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVP--- 446
L+G+GS G Y A N V +K++ N M+E ++ LR ++
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKV---------NRMFEDLIDCKRILREITILNRLK 83
Query: 447 ----LRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAK----PLHWTS--CLKIAEDV 496
+R Y + LL +D L+ ++ + S K P+ T I ++
Sbjct: 84 SDYIIRLYDLIIPDDLLKFD-----ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNL 138
Query: 497 AQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL---------TALTADSLQDDDP 547
G ++IH++ ++H +LK +N LL D + D+ L T + D ++++P
Sbjct: 139 LLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197
Query: 548 ----DNL-----------LYKAPETRNASHQATSKSDVYSFGVLLLELLT 582
NL Y+APE T D++S G + ELL
Sbjct: 198 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 135 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 193
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 194 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 250
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 126 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 184
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 185 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 241
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 127 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 185
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 186 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 242
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 125 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 183
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 184 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 240
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 120 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 178
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 179 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 235
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 119 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 177
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 178 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 81/220 (36%), Gaps = 36/220 (16%)
Query: 381 LDQLMRASAELLGKGSLGTTY------------KAVLDNRLIVCVKRLDASKLAGTSNEM 428
LDQ R LG GS G +LD + +V +K+++ T NE
Sbjct: 40 LDQFERIKT--LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEH-----TLNEK 92
Query: 429 YEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTS 488
+ + P LV L F+ ++ +Y G +FS H + R H
Sbjct: 93 -----RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH--- 142
Query: 489 CLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQD--DD 546
A + Y+H + L++ +LK N+L+ + D+
Sbjct: 143 ARFYAAQIVLTFEYLH-SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 547 PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
P+ Y APE S D ++ GVL+ E+ G PP
Sbjct: 202 PE---YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 171 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 229
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 230 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 286
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 165 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 224 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 98 PNSLTKLDQLRVLGLQNNSLTG-PIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKT 156
P+ LT + ++ L L NN +T DL VNL++L L N S SL L+
Sbjct: 21 PSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 78
Query: 157 LDLSYNNLSG 166
LDLSYN LS
Sbjct: 79 LDLSYNYLSN 88
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 121 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 179
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 180 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 491 KIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLG---PDFEACLADYCLTALTADSLQDDDP 547
+I + + + + Y+H + H ++K N+L P+ L D+ T P
Sbjct: 121 EIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 179
Query: 548 -DNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP--SQHSFLVPNEMMNWVR 602
Y APE S D++S GV++ LL G PP S H + M +R
Sbjct: 180 CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 21/138 (15%)
Query: 481 AKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLT-- 535
AK + L+++ + L YIH+ VHG++K+SN+LL PD + L DY L
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPD-QVYLVDYGLAYR 203
Query: 536 --------ALTADSLQDDDPDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLTGKPPS 587
A AD + D + + + + N + + D+ G +++ LTG P
Sbjct: 204 YCPEGVHKAYAADPKRCHD-GTIEFTSIDAHNGV-APSRRGDLEILGYCMIQWLTGHLPW 261
Query: 588 QHSFLVPNEMMNWVRSAR 605
+ + P +VR ++
Sbjct: 262 EDNLKDP----KYVRDSK 275
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 13/153 (8%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
+HPN++ L+ + + ++ + G L K R K + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLD-----KILRQKFFSEREASAVLFTITKT 128
Query: 500 LSYIHQAWRLVHGNLKSSNVLL-----GPD-FEACLADYCLTALTADSLQDDDPDNLLYK 553
+ Y+H A +VH +LK SN+L P+ C + + L +
Sbjct: 129 VEYLH-AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
APE + D++S GVLL +LTG P
Sbjct: 188 APEVLE-RQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 90 LDLGGI--FAPNSLTKLDQLRVLGLQNNSLTGPIPD--LSGLVNLKSLFLDHNFFTGSFP 145
LD G+ P L L+ L LQ+N+L +PD L NL LFL N
Sbjct: 111 LDRCGLQELGPGLFRGLAALQYLYLQDNNLQA-LPDNTFRDLGNLTHLFLHGNRIPSVPE 169
Query: 146 PSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSLRLDVN 186
+ LH L L L N+++ P GRL +L L N
Sbjct: 170 HAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFAN 210
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 99 NSLTKLDQLRVLGLQNNSLTG-PIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHRLKTL 157
N+ L L L L N + P GL +L L L N P + L RL TL
Sbjct: 146 NTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTL 205
Query: 158 DLSYNNLSGPLPKELASQGR-LYSLRLDVN 186
L NNLS LP E+ R L LRL+ N
Sbjct: 206 YLFANNLSM-LPAEVLVPLRSLQYLRLNDN 234
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 27/132 (20%)
Query: 90 LDLGGIFAPNSLTKLDQLRVLG--LQNNSLTGPIPDLSGLVNLKSLFLD------HNFFT 141
+D GIF LT L+ L++ G ++N+L+ + + L FLD
Sbjct: 433 IDFDGIFL--GLTSLNTLKMAGNSFKDNTLSNVFANTTNLT-----FLDLSKCQLEQISW 485
Query: 142 GSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSL-RLDV--NRFNGSIPPLNQ- 197
G F +LHRL+ L++S+NNL L + + +LYSL LD NR S L
Sbjct: 486 GVFD----TLHRLQLLNMSHNNL---LFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHF 538
Query: 198 -SSLKIFNVSGN 208
SL FN++ N
Sbjct: 539 PKSLAFFNLTNN 550
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 27/132 (20%)
Query: 90 LDLGGIFAPNSLTKLDQLRVLG--LQNNSLTGPIPDLSGLVNLKSLFLD------HNFFT 141
+D GIF LT L+ L++ G ++N+L+ + + L FLD
Sbjct: 438 IDFDGIFL--GLTSLNTLKMAGNSFKDNTLSNVFANTTNLT-----FLDLSKCQLEQISW 490
Query: 142 GSFPPSLLSLHRLKTLDLSYNNLSGPLPKELASQGRLYSL-RLDV--NRFNGSIPPLNQ- 197
G F +LHRL+ L++S+NNL L + + +LYSL LD NR S L
Sbjct: 491 GVFD----TLHRLQLLNMSHNNL---LFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHF 543
Query: 198 -SSLKIFNVSGN 208
SL FN++ N
Sbjct: 544 PKSLAFFNLTNN 555
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 31/143 (21%)
Query: 481 AKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTAL 537
AK + L+++ + L YIH+ VHG++K+SN+LL PD + L DY L
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPD-QVYLVDYGLAYR 203
Query: 538 TADSLQDDDPDNLLYKAPETRNASHQAT---------------SKSDVYSFGVLLLELLT 582
P+ + + E H T + D+ G +++ LT
Sbjct: 204 YC-------PEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT 256
Query: 583 GKPPSQHSFLVPNEMMNWVRSAR 605
G P + + P +VR ++
Sbjct: 257 GHLPWEDNLKDP----KYVRDSK 275
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 498 QGLSYIHQAWRLVHGNLKSSNVLLG-PDFEACLADYCLTALTAD--SLQDDDPDNLL--- 551
+GL YIH A ++H +LK +N+ + D + D+ L + S + + L+
Sbjct: 131 RGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189
Query: 552 YKAPETRNASHQATSKSDVYSFGVLLLELLTGK 584
Y++P + + T D+++ G + E+LTGK
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 31/143 (21%)
Query: 481 AKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLL---GPDFEACLADYCLTAL 537
AK + L+++ + L YIH+ VHG++K+SN+LL PD + L DY L
Sbjct: 146 AKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPD-QVYLVDYGLAYR 203
Query: 538 TADSLQDDDPDNLLYKAPETRNASHQAT---------------SKSDVYSFGVLLLELLT 582
P+ + + E H T + D+ G +++ LT
Sbjct: 204 YC-------PEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT 256
Query: 583 GKPPSQHSFLVPNEMMNWVRSAR 605
G P + + P +VR ++
Sbjct: 257 GHLPWEDNLKDP----KYVRDSK 275
>pdb|3VR6|D Chain D, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
pdb|3VR6|E Chain E, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
pdb|3VR6|F Chain F, Crystal Structure Of Amp-pnp Bound Enterococcus Hirae
V1-atpase [bv1]
Length = 465
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFF-TGSFPP--SLLSLHRLK 155
Q+ +L + + T PIPDL+G + + L + +G PP L SL RLK
Sbjct: 307 QIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQPPIDVLPSLSRLK 359
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-LQDDDPDNLLYKAPET 557
G+ ++H A ++H +LK SN+++ D + D+ L S + Y+APE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 558 RNASHQATSKSDVYSFGVLLLELLTG 583
D++S GV++ E++ G
Sbjct: 197 I-LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-LQDDDPDNLLYKAPET 557
G+ ++H A ++H +LK SN+++ D + D+ L S + Y+APE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 558 RNASHQATSKSDVYSFGVLLLELLTG 583
D++S GV++ E++ G
Sbjct: 197 I-LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2RKW|A Chain A, Intermediate Position Of Atp On Its Trail To The Binding
Pocket Inside The Subunit B Mutant R416w Of The Energy
Converter A1ao Atp Synthase
pdb|2RKW|B Chain B, Intermediate Position Of Atp On Its Trail To The Binding
Pocket Inside The Subunit B Mutant R416w Of The Energy
Converter A1ao Atp Synthase
pdb|3B2Q|A Chain A, Intermediate Position Of Atp On Its Trail To The Binding
Pocket Inside The Subunit B Mutant R416w Of The Energy
Converter A1ao Atp Synthase
pdb|3B2Q|B Chain B, Intermediate Position Of Atp On Its Trail To The Binding
Pocket Inside The Subunit B Mutant R416w Of The Energy
Converter A1ao Atp Synthase
pdb|3EIU|A Chain A, A Second Transient Position Of Atp On Its Trail To The
Nucleotide- Binding Site Of Subunit B Of The Motor
Protein A1ao Atp Synthase
pdb|3EIU|B Chain B, A Second Transient Position Of Atp On Its Trail To The
Nucleotide- Binding Site Of Subunit B Of The Motor
Protein A1ao Atp Synthase
Length = 469
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFF-TGSFPP--SLLSLHRL 154
Q+ +L + + +T PIPDLSG + + + G +PP L SL RL
Sbjct: 308 QIPILSMPGDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRL 359
>pdb|3TIV|A Chain A, Crystal Structure Of Subunit B Mutant N157a Of The A1ao
Atp Synthase
pdb|3TIV|B Chain B, Crystal Structure Of Subunit B Mutant N157a Of The A1ao
Atp Synthase
Length = 460
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFF-TGSFPP--SLLSLHRL 154
Q+ +L + + +T PIPDLSG + + + G +PP L SL RL
Sbjct: 299 QIPILSMPGDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRL 350
>pdb|3TGW|A Chain A, Crystal Structure Of Subunit B Mutant H156a Of The A1ao
Atp Synthase
pdb|3TGW|B Chain B, Crystal Structure Of Subunit B Mutant H156a Of The A1ao
Atp Synthase
Length = 460
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFF-TGSFPP--SLLSLHRL 154
Q+ +L + + +T PIPDLSG + + + G +PP L SL RL
Sbjct: 299 QIPILSMPGDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRL 350
>pdb|2C61|A Chain A, Crystal Structure Of The Non-Catalytic B Subunit Of A-Type
Atpase From M. Mazei Go1
pdb|2C61|B Chain B, Crystal Structure Of The Non-Catalytic B Subunit Of A-Type
Atpase From M. Mazei Go1
pdb|3DSR|A Chain A, Adp In Transition Binding Site In The Subunit B Of The
Energy Converter A1ao Atp Synthase
pdb|3DSR|B Chain B, Adp In Transition Binding Site In The Subunit B Of The
Energy Converter A1ao Atp Synthase
Length = 469
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFF-TGSFPP--SLLSLHRL 154
Q+ +L + + +T PIPDLSG + + + G +PP L SL RL
Sbjct: 308 QIPILSMPGDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRL 359
>pdb|3SSA|A Chain A, Crystal Structure Of Subunit B Mutant N157t Of The A1ao
Atp Synthase
pdb|3SSA|B Chain B, Crystal Structure Of Subunit B Mutant N157t Of The A1ao
Atp Synthase
Length = 460
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 106 QLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFF-TGSFPP--SLLSLHRL 154
Q+ +L + + +T PIPDLSG + + + G +PP L SL RL
Sbjct: 299 QIPILSMPGDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRL 350
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-LQDDDPDNLLYKAPET 557
G+ ++H A ++H +LK SN+++ D + D+ L S + + Y+APE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
Query: 558 RNASHQATSKSDVYSFGVLLLELLTG 583
D++S G ++ E++ G
Sbjct: 197 I-LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 552 YKAPETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
++APE T+ D++S GV+ L LL+G+ P
Sbjct: 212 FRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 13/153 (8%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
+HPN++ L+ + + ++ + G L I R K + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKI-----LRQKFFSEREASAVLFTITKT 128
Query: 500 LSYIHQAWRLVHGNLKSSNVLL-----GPD-FEACLADYCLTALTADSLQDDDPDNLLYK 553
+ Y+H A +VH +LK SN+L P+ C + + L +
Sbjct: 129 VEYLH-AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV 187
Query: 554 APETRNASHQATSKSDVYSFGVLLLELLTGKPP 586
APE + D++S GVLL LTG P
Sbjct: 188 APEVLE-RQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCL--TALTADSLQDDDPDNLLYKAPE 556
G+ ++H A ++H +LK SN+++ D + D+ L TA T + + Y+APE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT-NFMMTPYVVTRYYRAPE 195
Query: 557 TRNASHQATSKSDVYSFGVLLLELLTG 583
A + D++S G ++ EL+ G
Sbjct: 196 VILGMGYA-ANVDIWSVGCIMGELVKG 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 14/182 (7%)
Query: 410 IVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAYFQAKEERLLIYDYQPNGSL 469
+ VK + L G + + E + + ++H N+V L +++ L+ G L
Sbjct: 49 LFAVKCIPKKALKGKESSI-ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL 107
Query: 470 FSLIHGSKSTRAKPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEAC- 528
F I K + V + Y+H+ +VH +LK N+L E
Sbjct: 108 FDRIVEKGFYTEK-----DASTLIRQVLDAVYYLHRM-GIVHRDLKPENLLYYSQDEESK 161
Query: 529 --LADYCLTALTAD-SLQDDDPDNLLYKAPETRNASHQATSKS-DVYSFGVLLLELLTGK 584
++D+ L+ + + Y APE + + SK+ D +S GV+ LL G
Sbjct: 162 IMISDFGLSKMEGKGDVMSTACGTPGYVAPEV--LAQKPYSKAVDCWSIGVIAYILLCGY 219
Query: 585 PP 586
PP
Sbjct: 220 PP 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-LQDDDPDNLLYKAPET 557
G+ ++H A ++H +LK SN+++ D + D+ L S + + + Y+APE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGK 584
D++S G ++ E++ K
Sbjct: 197 I-LGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 484 LHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADSLQ 543
L + L A VA+G+ ++ VH +L + NVL+ + C L D +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNVLVT---HGKVVKICDFGLARDIMS 224
Query: 544 DDD---------PDNLLYKAPETRNASHQATSKSDVYSFGVLLLELLT 582
D + P + + APE+ T KSDV+S+G+LL E+ +
Sbjct: 225 DSNYVVRGNARLP--VKWMAPESL-FEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 18/175 (10%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
+HPN++ L+ + + L+ + G L I R K + + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-----LRQKFFSEREASFVLHTIGKT 133
Query: 500 LSYIHQAWRLVHGNLKSSNVLL-----GPD-FEACLADYCLTALTADSLQDDDPDNLLYK 553
+ Y+H + +VH +LK SN+L P+ C + + L +
Sbjct: 134 VEYLH-SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 554 APET--RNASHQATSKSDVYSFGVLLLELLTGKPP-SQHSFLVPNEMMNWVRSAR 605
APE R + D++S G+LL +L G P + P E++ + S +
Sbjct: 193 APEVLKRQGYDEG---CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGK 244
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 18/175 (10%)
Query: 440 RHPNLVPLRAYFQAKEERLLIYDYQPNGSLFSLIHGSKSTRAKPLHWTSCLKIAEDVAQG 499
+HPN++ L+ + + L+ + G L I R K + + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI-----LRQKFFSEREASFVLHTIGKT 133
Query: 500 LSYIHQAWRLVHGNLKSSNVLL-----GPD-FEACLADYCLTALTADSLQDDDPDNLLYK 553
+ Y+H + +VH +LK SN+L P+ C + + L +
Sbjct: 134 VEYLH-SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFV 192
Query: 554 APET--RNASHQATSKSDVYSFGVLLLELLTGKPP-SQHSFLVPNEMMNWVRSAR 605
APE R + D++S G+LL +L G P + P E++ + S +
Sbjct: 193 APEVLKRQGYDEG---CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGK 244
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 94 GIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHR 153
G+F + LT+LD+L + G Q SL + D L LK L L+ N + L
Sbjct: 101 GVF--DHLTQLDKLYLGGNQLKSLPSGVFDR--LTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 154 LKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGS 191
L+TL LS N L G+L ++ L N+F+ S
Sbjct: 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 94 GIFAPNSLTKLDQLRVLGLQNNSLTGPIPDLSGLVNLKSLFLDHNFFTGSFPPSLLSLHR 153
G+F + LT+LD+L + G Q SL + D L LK L L+ N + L
Sbjct: 101 GVF--DHLTQLDKLYLGGNQLKSLPSGVFDR--LTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 154 LKTLDLSYNNLSGPLPKELASQGRLYSLRLDVNRFNGS 191
L+TL LS N L G+L ++ L N+F+ S
Sbjct: 157 LQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 110/275 (40%), Gaps = 45/275 (16%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY- 450
+G G ++ + + + I +K ++ + + + Y + + L+ + +R Y
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTR--AKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
++ ++ + + N L S + KS + +W + L + + IHQ
Sbjct: 80 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNML-------EAVHTIHQH-G 131
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPET-RNASHQ 563
+VH +LK +N L+ D L D+ + T ++D + Y PE ++ S
Sbjct: 132 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 564 ATS---------KSDVYSFGVLLLELLTGKPPSQ---------HSFLVPNEMMNWVRSAR 605
+ KSDV+S G +L + GK P Q H+ + PN + +
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 250
Query: 606 EDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVL 640
+D L +V C P+QR ++ ++L
Sbjct: 251 KD----------LQDVLKCCLKRDPKQRISIPELL 275
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 110/275 (40%), Gaps = 45/275 (16%)
Query: 392 LGKGSLGTTYKAVLDNRLIVCVKRLDASKLAGTSNEMYEQHMESVGGLRHPNLVPLRAY- 450
+G G ++ + + + I +K ++ + + + Y + + L+ + +R Y
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 451 FQAKEERLLIYDYQPNGSLFSLIHGSKSTR--AKPLHWTSCLKIAEDVAQGLSYIHQAWR 508
++ ++ + + N L S + KS + +W + L + + IHQ
Sbjct: 76 YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNML-------EAVHTIHQH-G 127
Query: 509 LVHGNLKSSNVLLGPDFEACLADYCLTAL----TADSLQDDDPDNLLYKAPET-RNASHQ 563
+VH +LK +N L+ D L D+ + T ++D + Y PE ++ S
Sbjct: 128 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 564 ATS---------KSDVYSFGVLLLELLTGKPPSQ---------HSFLVPNEMMNWVRSAR 605
+ KSDV+S G +L + GK P Q H+ + PN + +
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE 246
Query: 606 EDDGAEDERLGMLLEVAIACNSASPEQRPTMWQVL 640
+D L +V C P+QR ++ ++L
Sbjct: 247 KD----------LQDVLKCCLKRDPKQRISIPELL 271
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 499 GLSYIHQAWRLVHGNLKSSNVLLGPDFEACLADYCLTALTADS-LQDDDPDNLLYKAPET 557
G+ ++H A ++H +LK SN+++ D + D+ L S + + + Y+APE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 558 RNASHQATSKSDVYSFGVLLLELLTGK 584
D++S G ++ E++ K
Sbjct: 197 -ILGMGYKENVDLWSVGCIMGEMVCHK 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,268,011
Number of Sequences: 62578
Number of extensions: 657335
Number of successful extensions: 3634
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 739
Number of HSP's that attempted gapping in prelim test: 2217
Number of HSP's gapped (non-prelim): 1134
length of query: 664
length of database: 14,973,337
effective HSP length: 105
effective length of query: 559
effective length of database: 8,402,647
effective search space: 4697079673
effective search space used: 4697079673
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)